Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 Gene3D G3DSA:3.20.20.450 2 202 3.4E-22 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 SMART SM00052 3 198 7.3E-7 T 11-10-2018 IPR001633 EAL domain Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 Pfam PF08668 HDOD domain 220 327 5.3E-12 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 Gene3D G3DSA:1.10.3210.10 205 382 6.4E-19 T 11-10-2018 Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 PIRSF PIRSF003180 2 406 9.3E-105 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 SUPERFAMILY SSF141868 3 197 6.54E-33 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 SUPERFAMILY SSF109604 184 401 2.7E-34 T 11-10-2018 Tbd_1938 99a3300882644edd60f3f51f7db3cb7b 422 Pfam PF00563 EAL domain 63 193 7.8E-13 T 11-10-2018 IPR001633 EAL domain Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Gene3D G3DSA:3.10.20.740 3 126 2.4E-42 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Gene3D G3DSA:3.40.228.10 343 403 2.1E-12 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Gene3D G3DSA:3.40.50.740 452 664 6.2E-20 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Gene3D G3DSA:3.40.50.740 282 342 2.1E-12 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 100 112 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 SUPERFAMILY SSF54292 5 76 9.36E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 SUPERFAMILY SSF50692 696 773 2.49E-5 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_1148 686914ee5c47112b0c749c66e885a105 784 SMART SM00929 85 125 5.5E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 4.4E-21 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Pfam PF00384 Molybdopterin oxidoreductase 274 634 7.3E-32 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 SUPERFAMILY SSF54862 78 213 4.6E-37 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 6 634 9.1E-201 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 123 2.8E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 Gene3D G3DSA:3.30.70.20 127 206 1.2E-7 T 11-10-2018 Tbd_1148 686914ee5c47112b0c749c66e885a105 784 SUPERFAMILY SSF53706 215 661 3.26E-89 T 11-10-2018 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 3.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 3.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 3.1E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 SUPERFAMILY SSF46785 9 112 4.15E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 SMART SM00450 120 216 5.7E-13 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 SMART SM00418 16 94 9.6E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 Gene3D G3DSA:1.10.10.10 2 107 7.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 Gene3D G3DSA:3.40.250.10 110 219 2.4E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 Pfam PF01022 Bacterial regulatory protein, arsR family 23 69 1.4E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 SUPERFAMILY SSF52821 108 219 1.1E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2739 253507ee1f7f1f1b9a10b1ffdd8a9208 220 Pfam PF00581 Rhodanese-like domain 126 212 3.3E-11 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 14 536 50.951 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 25 158 1.2E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Gene3D G3DSA:3.40.50.300 82 388 3.8E-107 T 11-10-2018 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 68 83 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 SUPERFAMILY SSF52540 19 287 1.45E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 SUPERFAMILY SSF54980 401 475 2.09E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 PRINTS PR00315 GTP-binding elongation factor signature 111 122 4.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 PRINTS PR00315 GTP-binding elongation factor signature 75 83 4.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 PRINTS PR00315 GTP-binding elongation factor signature 25 38 4.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 PRINTS PR00315 GTP-binding elongation factor signature 147 156 4.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 PRINTS PR00315 GTP-binding elongation factor signature 95 105 4.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Gene3D G3DSA:3.40.50.300 120 284 3.8E-107 T 11-10-2018 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 18 538 7.8E-237 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Pfam PF00009 Elongation factor Tu GTP binding domain 22 286 2.1E-49 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Pfam PF03144 Elongation factor Tu domain 2 323 389 5.5E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Pfam PF16658 Class II release factor RF3, C-terminal domain 396 523 9.3E-43 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 Gene3D G3DSA:3.30.70.3280 399 538 2.8E-47 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Tbd_0968 aaf1e299ba1306cd117a0dd6c776c565 543 SUPERFAMILY SSF50447 270 401 4.95E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0900 1196e5dfa25aa21f9a5eed292560515a 284 Gene3D G3DSA:1.10.287.470 92 154 2.7E-13 T 11-10-2018 Tbd_0900 1196e5dfa25aa21f9a5eed292560515a 284 Gene3D G3DSA:2.40.30.170 54 278 2.7E-13 T 11-10-2018 Tbd_0900 1196e5dfa25aa21f9a5eed292560515a 284 Gene3D G3DSA:2.40.50.100 57 198 2.7E-13 T 11-10-2018 Tbd_0900 1196e5dfa25aa21f9a5eed292560515a 284 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 258 1.5E-23 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_0745 af05f3fc25577790032661f8b1df6005 356 Gene3D G3DSA:3.90.15.10 136 255 9.8E-85 T 11-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 SUPERFAMILY SSF56349 101 339 4.71E-69 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 Gene3D G3DSA:3.30.66.10 32 111 1.8E-32 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal Tbd_0745 af05f3fc25577790032661f8b1df6005 356 Gene3D G3DSA:1.10.132.120 113 342 9.8E-85 T 11-10-2018 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 168 182 6.4E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 145 164 6.4E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 189 205 6.4E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 254 268 6.4E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Tbd_0745 af05f3fc25577790032661f8b1df6005 356 SUPERFAMILY SSF55869 45 105 4.71E-22 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal Tbd_0745 af05f3fc25577790032661f8b1df6005 356 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 111 308 5.1E-25 T 11-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 Pfam PF00664 ABC transporter transmembrane region 34 302 2.1E-29 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 Pfam PF00005 ABC transporter 368 517 4.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 SMART SM00382 377 563 8.4E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 SUPERFAMILY SSF90123 16 340 8.11E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 Gene3D G3DSA:1.20.1560.10 24 340 4.2E-91 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 Gene3D G3DSA:3.40.50.300 342 599 3.0E-97 T 11-10-2018 Tbd_0739 dfe03e8deacd28faeaecd84d2a7e551d 624 SUPERFAMILY SSF52540 343 587 3.65E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 SUPERFAMILY SSF51735 4 227 9.73E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 Gene3D G3DSA:3.40.50.720 2 236 1.3E-65 T 11-10-2018 Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 Pfam PF00106 short chain dehydrogenase 7 195 3.4E-54 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0734 7ad2c86bc15eef1cbc0a02d5f18faff2 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 SUPERFAMILY SSF53850 91 299 9.64E-39 T 11-10-2018 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 SUPERFAMILY SSF46785 8 113 4.41E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 Gene3D G3DSA:1.10.10.10 4 91 2.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 Gene3D G3DSA:3.40.190.10 165 270 3.3E-73 T 11-10-2018 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 Gene3D G3DSA:3.40.190.10 92 293 3.3E-73 T 11-10-2018 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2285 358fb768a9442585f1d38f72acdd0a02 309 Pfam PF03466 LysR substrate binding domain 90 295 2.7E-35 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_1321 bf2181c74eb010c91e9a13b87dc3c319 144 Gene3D G3DSA:2.130.10.10 1 144 3.3E-25 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1321 bf2181c74eb010c91e9a13b87dc3c319 144 SUPERFAMILY SSF51004 2 135 2.59E-24 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Tbd_1137 e056765863c413e9fe9c38d0460032cb 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 3.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_1137 e056765863c413e9fe9c38d0460032cb 325 SUPERFAMILY SSF161098 34 311 3.74E-36 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1137 e056765863c413e9fe9c38d0460032cb 325 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 24 318 5.7E-94 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Tbd_1137 e056765863c413e9fe9c38d0460032cb 325 Gene3D G3DSA:1.10.3720.10 77 321 2.6E-36 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:2.40.270.10 1054 1259 2.5E-84 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1081 1093 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF04563 RNA polymerase beta subunit 27 504 5.7E-38 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:2.40.50.150 838 960 1.7E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1355 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 SUPERFAMILY SSF64484 12 1357 0.0 T 11-10-2018 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:2.40.50.100 719 793 1.5E-28 T 11-10-2018 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1359 12.315 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 3.0E-26 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1281 1.9E-161 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:2.40.270.10 795 837 6.2E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:3.90.1800.10 1269 1322 6.0E-11 T 11-10-2018 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:3.90.1100.10 447 631 6.9E-72 T 11-10-2018 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF04560 RNA polymerase Rpb2, domain 7 1283 1356 1.2E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:3.90.1110.10 311 446 3.9E-33 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 348 459 2.3E-16 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 227 7.2E-7 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 1.7E-31 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:3.90.1100.10 646 718 8.3E-21 T 11-10-2018 Tbd_0398 be4903907f0f7402761b433629f45001 1359 Gene3D G3DSA:3.90.1100.10 18 175 6.1E-55 T 11-10-2018 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 407 161.186 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 Gene3D G3DSA:3.60.70.12 11 277 5.6E-93 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 SUPERFAMILY SSF56266 16 404 7.46E-140 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 Gene3D G3DSA:3.10.20.340 278 407 1.1E-43 T 11-10-2018 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 0.0 T 11-10-2018 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 Pfam PF01960 ArgJ family 23 407 5.2E-145 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tbd_0029 aa5de5611a1f2a182b6e853165193243 407 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 17 407 4.0E-127 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 Gene3D G3DSA:1.25.40.10 415 600 9.3E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 SUPERFAMILY SSF48452 426 593 2.17E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 SMART SM00028 106 139 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 SMART SM00028 526 559 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 Gene3D G3DSA:1.25.40.10 85 350 3.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1371 d50d3d4b0d7796c36eb2bba020c322b4 601 SUPERFAMILY SSF48452 96 586 7.59E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 Pfam PF00990 Diguanylate cyclase, GGDEF domain 402 558 2.5E-48 T 11-10-2018 IPR000160 GGDEF domain Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 Gene3D G3DSA:2.60.40.2380 32 175 1.4E-16 T 11-10-2018 Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 Pfam PF07695 7TM diverse intracellular signalling 183 386 3.6E-37 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 Gene3D G3DSA:3.30.70.270 390 561 5.2E-55 T 11-10-2018 Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 SMART SM00267 389 562 5.3E-64 T 11-10-2018 IPR000160 GGDEF domain Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 SUPERFAMILY SSF55073 407 560 1.96E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 399 560 1.2E-49 T 11-10-2018 IPR000160 GGDEF domain Tbd_2693 d7cf0f539c94bd2fdec1a190cc27dae6 570 Pfam PF07696 7TMR-DISM extracellular 2 38 171 1.6E-26 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 SUPERFAMILY SSF54534 292 392 5.23E-32 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Gene3D G3DSA:3.10.50.40 181 283 1.3E-71 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Pfam PF00639 PPIC-type PPIASE domain 187 280 3.5E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Hamap MF_01183 Chaperone SurA [surA]. 16 435 34.542 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Gene3D G3DSA:1.10.4030.30 37 284 1.3E-71 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 329 349 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Gene3D G3DSA:3.10.50.40 289 427 2.1E-41 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 SUPERFAMILY SSF109998 36 211 5.76E-40 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Pfam PF13616 PPIC-type PPIASE domain 292 390 4.2E-26 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 SUPERFAMILY SSF54534 181 285 2.62E-27 T 11-10-2018 Tbd_2338 6fa136977fb5f7a61f6f68765fb03644 436 Pfam PF09312 SurA N-terminal domain 35 152 7.0E-39 T 11-10-2018 IPR015391 SurA N-terminal Tbd_2411 b97578d536680f05191368a9c3fe4ce2 362 Gene3D G3DSA:3.10.520.20 53 362 2.4E-82 T 11-10-2018 Tbd_2411 b97578d536680f05191368a9c3fe4ce2 362 PIRSF PIRSF006268 23 362 4.9E-106 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Tbd_2411 b97578d536680f05191368a9c3fe4ce2 362 SUPERFAMILY SSF143631 55 361 5.75E-77 T 11-10-2018 IPR003374 ApbE-like superfamily Tbd_2411 b97578d536680f05191368a9c3fe4ce2 362 Pfam PF02424 ApbE family 62 334 1.6E-72 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Tbd_1375 7067b5e20a36b2d4fc63988f716f240a 596 SUPERFAMILY SSF56762 4 581 1.22E-168 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1375 7067b5e20a36b2d4fc63988f716f240a 596 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 42 67 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tbd_1375 7067b5e20a36b2d4fc63988f716f240a 596 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 572 581 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tbd_1375 7067b5e20a36b2d4fc63988f716f240a 596 Gene3D G3DSA:1.10.645.10 3 581 6.6E-253 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1375 7067b5e20a36b2d4fc63988f716f240a 596 Pfam PF00374 Nickel-dependent hydrogenase 42 581 9.1E-230 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Gene3D G3DSA:3.30.70.100 71 135 2.9E-22 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Pfam PF00403 Heavy-metal-associated domain 9 63 1.8E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Pfam PF00403 Heavy-metal-associated domain 71 130 1.7E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Gene3D G3DSA:3.40.50.1000 458 730 1.3E-87 T 11-10-2018 IPR023214 HAD superfamily Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 SUPERFAMILY SSF56784 475 778 1.92E-56 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 635 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 603 614 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 477 491 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 678 697 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 713 2.6E-25 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 74 103 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Gene3D G3DSA:3.30.70.100 2 70 1.5E-22 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 479 485 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Gene3D G3DSA:2.70.150.20 271 382 1.9E-39 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Pfam PF00122 E1-E2 ATPase 278 457 4.9E-60 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 678 700 - T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 583 760 1.4E-41 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 250 502 1.9E-46 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 SUPERFAMILY SSF81665 237 753 2.09E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 214 780 1.9E-191 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 709 734 2.2E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 650 666 2.2E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 678 694 2.2E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 473 692 7.8E-45 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 SUPERFAMILY SSF81653 280 377 8.11E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 SUPERFAMILY SSF55008 6 65 1.13E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 7 65 3.2E-8 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 SUPERFAMILY SSF55008 69 135 3.01E-20 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 196 781 1.6E-181 T 11-10-2018 Tbd_2266 f742134d50a51880f0a6bb8ac732e9c5 790 Gene3D G3DSA:3.40.1110.10 488 610 1.3E-87 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 SMART SM00387 352 463 2.4E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 SUPERFAMILY SSF47384 226 309 6.08E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 8.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 SMART SM00388 243 309 7.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 SUPERFAMILY SSF55874 299 461 5.89E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 SMART SM00304 189 242 2.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 Gene3D G3DSA:3.30.565.10 317 463 4.2E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 Gene3D G3DSA:1.10.287.130 194 309 2.4E-22 T 11-10-2018 Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 462 4.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1750 7bfa92cd01bb32463d4c3216a832faa4 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 460 1.0E-154 T 11-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 1.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 1.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 1.7E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 SUPERFAMILY SSF55874 486 615 8.77E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 Pfam PF00512 His Kinase A (phospho-acceptor) domain 408 471 8.2E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 Gene3D G3DSA:1.10.287.130 394 471 2.8E-18 T 11-10-2018 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 SMART SM00387 513 619 2.4E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 514 616 5.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 SMART SM00388 408 473 7.3E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 Gene3D G3DSA:3.30.565.10 481 618 1.5E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1806 66cefbbb08129d8799ba8432c6b48be4 619 SUPERFAMILY SSF47384 400 471 7.85E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_0703 fbfc5408f689e7da3c117832e299cfec 207 Gene3D G3DSA:3.40.470.10 3 206 3.3E-63 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0703 fbfc5408f689e7da3c117832e299cfec 207 SUPERFAMILY SSF52141 7 204 4.91E-46 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0703 fbfc5408f689e7da3c117832e299cfec 207 SMART SM00986 33 200 1.8E-30 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0703 fbfc5408f689e7da3c117832e299cfec 207 SMART SM00987 33 200 1.8E-30 T 11-10-2018 Tbd_0703 fbfc5408f689e7da3c117832e299cfec 207 Pfam PF03167 Uracil DNA glycosylase superfamily 33 201 1.6E-28 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 Gene3D G3DSA:3.30.1330.60 180 323 8.1E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 ProSitePatterns PS01068 OmpA-like domain. 249 293 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01021 OMPA domain signature 217 239 1.6E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01021 OMPA domain signature 262 278 1.6E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01021 OMPA domain signature 247 262 1.6E-13 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 SUPERFAMILY SSF103088 207 317 3.79E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 Pfam PF14346 Domain of unknown function (DUF4398) 15 114 1.1E-17 T 11-10-2018 IPR025511 Domain of unknown function DUF4398 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 300 320 8.7E-11 T 11-10-2018 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 259 8.7E-11 T 11-10-2018 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 280 299 8.7E-11 T 11-10-2018 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 262 279 8.7E-11 T 11-10-2018 Tbd_0244 8b2c6c88fc8bb375823b4d2eee9aceff 331 Pfam PF00691 OmpA family 216 311 3.1E-22 T 11-10-2018 IPR006665 OmpA-like domain Tbd_1326 12cdb66f00e436be6320c9395856a85b 134 Gene3D G3DSA:2.40.50.320 59 133 4.3E-24 T 11-10-2018 Tbd_1326 12cdb66f00e436be6320c9395856a85b 134 Pfam PF11604 Copper binding periplasmic protein CusF 65 131 3.8E-24 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 Gene3D G3DSA:3.50.50.60 140 293 2.0E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 Pfam PF13187 4Fe-4S dicluster domain 546 590 3.3E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 SUPERFAMILY SSF54862 517 597 4.68E-18 T 11-10-2018 Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 257 8.8E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 Gene3D G3DSA:3.30.70.20 541 619 1.1E-11 T 11-10-2018 Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 SUPERFAMILY SSF51905 142 520 9.5E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 576 587 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1647 f511a95418b7f0576ba2c607bf2d430f 752 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 620 745 9.1E-37 T 11-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 Gene3D G3DSA:3.50.50.60 34 337 4.0E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 Gene3D G3DSA:3.50.50.60 143 269 4.0E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 33 338 3.2E-116 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 4.1E-38 T 11-10-2018 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 4.1E-38 T 11-10-2018 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 4.1E-38 T 11-10-2018 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.1E-38 T 11-10-2018 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 34 53 4.1E-38 T 11-10-2018 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 SUPERFAMILY SSF51905 27 338 1.2E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 326 3.0E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 161 181 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 132 140 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 263 284 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 87 97 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 169 193 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 224 240 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 166 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 301 319 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 81 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_1001 9648a5beb6abd37c34d107d76fed312f 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 33 55 4.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 Gene3D G3DSA:3.40.50.720 1 244 1.7E-66 T 11-10-2018 Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 SUPERFAMILY SSF51735 2 244 3.38E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 3.9E-50 T 11-10-2018 Tbd_2701 1731e3d85caca32f7dfe2506d9b1729c 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 596 612 6.0E-56 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 704 723 6.0E-56 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 745 6.0E-56 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 674 693 6.0E-56 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 6.0E-56 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 2.3E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Gene3D G3DSA:3.40.50.300 314 491 5.4E-63 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 TIGRFAM TIGR00763 lon: endopeptidase La 14 772 5.6E-295 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 SUPERFAMILY SSF54211 596 771 4.55E-60 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Gene3D G3DSA:3.30.230.10 586 773 5.8E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 203 2.5E-39 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 773 3.5E-99 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 SUPERFAMILY SSF88697 12 203 1.02E-49 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 SMART SM00382 349 493 7.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 677 685 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Gene3D G3DSA:1.10.8.60 492 585 1.5E-32 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Gene3D G3DSA:2.30.130.40 2 119 1.9E-34 T 11-10-2018 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 SUPERFAMILY SSF52540 314 587 6.61E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 PIRSF PIRSF001174 2 776 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Hamap MF_01973 Lon protease [lon]. 13 773 71.595 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 SMART SM00464 12 204 3.0E-77 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_1675 80ac43bea38e10d328fd2072ac72edd3 805 Gene3D G3DSA:1.20.58.1480 124 246 7.4E-42 T 11-10-2018 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 SUPERFAMILY SSF103247 227 348 4.19E-25 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 SUPERFAMILY SSF46626 106 213 1.13E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Pfam PF03625 Domain of unknown function DUF302 271 318 3.6E-11 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 SUPERFAMILY SSF46626 3 101 1.6E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Gene3D G3DSA:1.10.760.10 11 98 5.2E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Pfam PF00034 Cytochrome c 117 207 2.6E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 23 96 1.0E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Gene3D G3DSA:3.30.310.70 226 349 3.9E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2545 e6d4e3b8ad634939287b1a0d9c9561f4 350 Gene3D G3DSA:1.10.760.10 103 212 1.8E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:3.20.20.80 179 724 1.1E-118 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 752 1711 6.7E-303 T 11-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:1.10.10.470 1389 1498 1.2E-28 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 142 726 8.9E-143 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:3.20.20.80 762 842 1.7E-19 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:3.20.20.80 1499 1609 6.8E-41 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:3.20.20.80 1035 1213 5.8E-34 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 SUPERFAMILY SSF51445 751 1606 3.37E-132 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 SUPERFAMILY SSF51445 180 719 3.49E-138 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Gene3D G3DSA:3.30.1590.10 843 942 1.4E-23 T 11-10-2018 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Pfam PF02446 4-alpha-glucanotransferase 187 707 1.1E-109 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 SMART SM00642 764 1317 3.0E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1174 f531b2adfa09bf22b8e686d519c32376 1715 Pfam PF00128 Alpha amylase, catalytic domain 773 844 3.7E-16 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 366 2.2E-43 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 Gene3D G3DSA:3.90.120.10 226 359 1.2E-5 T 11-10-2018 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 Gene3D G3DSA:3.40.50.150 2 178 1.9E-38 T 11-10-2018 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 3.0E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 167 3.0E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 109 123 3.0E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 SUPERFAMILY SSF53335 2 367 4.98E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1810 636db14fd6a67a9873d958de1dd0b5a3 382 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 363 3.8E-41 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SMART SM00448 508 621 1.7E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SUPERFAMILY SSF52172 510 629 2.13E-24 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SUPERFAMILY SSF55874 322 486 2.36E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SMART SM00388 268 333 4.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 487 2.2E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SUPERFAMILY SSF47384 261 333 5.49E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Gene3D G3DSA:1.10.287.130 254 333 2.4E-16 T 11-10-2018 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Gene3D G3DSA:3.30.565.10 334 489 1.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Gene3D G3DSA:1.20.1480.50 155 249 8.8E-6 T 11-10-2018 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Gene3D G3DSA:3.40.50.2300 501 632 4.5E-23 T 11-10-2018 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Pfam PF00072 Response regulator receiver domain 510 621 1.3E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SMART SM00304 190 242 2.3E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 333 9.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 SMART SM00387 377 488 2.6E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 1.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 1.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 1.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2571 eb5389545cc9a43720744de2b284da6d 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 441 1.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SUPERFAMILY SSF47644 658 745 8.24E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SUPERFAMILY SSF51717 365 639 6.15E-90 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:3.10.196.10 916 1233 1.5E-145 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Pfam PF02574 Homocysteine S-methyltransferase 26 334 3.2E-80 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 TIGRFAM TIGR02082 metH: methionine synthase 22 1202 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Pfam PF02607 B12 binding domain 666 738 1.7E-24 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SMART SM01018 663 746 2.1E-43 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Pfam PF00809 Pterin binding enzyme 369 607 4.9E-60 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:3.40.50.280 752 903 2.2E-57 T 11-10-2018 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:1.10.1240.10 655 743 1.4E-38 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 PIRSF PIRSF000381 10 1205 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SUPERFAMILY SSF82282 16 408 4.32E-119 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1218 4.9E-126 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:3.20.20.20 349 651 3.9E-132 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:1.10.288.10 945 1102 1.5E-145 T 11-10-2018 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Gene3D G3DSA:3.20.20.330 10 347 7.9E-128 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SUPERFAMILY SSF52242 750 902 2.22E-46 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 SUPERFAMILY SSF56507 911 1237 1.44E-135 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0234 0541ea59e3ebfd14402a62207eac60c9 1237 Pfam PF02310 B12 binding domain 756 850 1.3E-20 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 PIRSF PIRSF006487 5 351 8.7E-21 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 SUPERFAMILY SSF101790 275 352 2.22E-7 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 Pfam PF01571 Aminomethyltransferase folate-binding domain 36 247 2.9E-19 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 Gene3D G3DSA:2.40.30.160 227 344 6.7E-35 T 11-10-2018 Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 Gene3D G3DSA:3.30.70.1400 58 145 2.1E-31 T 11-10-2018 Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 219 282 3.1E-27 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 Gene3D G3DSA:3.30.70.1630 55 221 2.1E-31 T 11-10-2018 Tbd_2098 c7e885406e76a2520739d30b64d7f045 354 SUPERFAMILY SSF103025 34 273 2.83E-64 T 11-10-2018 Tbd_1650 2aebf31af970eb6166b8ce1aee175ce0 217 Gene3D G3DSA:3.40.250.10 80 214 4.3E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1650 2aebf31af970eb6166b8ce1aee175ce0 217 Pfam PF00581 Rhodanese-like domain 94 206 2.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1650 2aebf31af970eb6166b8ce1aee175ce0 217 SUPERFAMILY SSF52821 96 215 5.24E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1650 2aebf31af970eb6166b8ce1aee175ce0 217 SMART SM00450 90 211 1.6E-5 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0527 5da203a8a3a0cc3de478f21328ce518e 182 PIRSF PIRSF027391 12 169 3.8E-24 T 11-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I Tbd_0527 5da203a8a3a0cc3de478f21328ce518e 182 Pfam PF07456 Heptaprenyl diphosphate synthase component I 20 165 7.2E-40 T 11-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I Tbd_1960 daee8e19522b23ed7dc2ce26021c1dc7 196 SUPERFAMILY SSF101874 2 181 1.83E-47 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1960 daee8e19522b23ed7dc2ce26021c1dc7 196 SMART SM00867 3 181 1.8E-66 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1960 daee8e19522b23ed7dc2ce26021c1dc7 196 Gene3D G3DSA:2.40.128.110 2 186 3.7E-46 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1960 daee8e19522b23ed7dc2ce26021c1dc7 196 Pfam PF04264 YceI-like domain 4 180 2.4E-39 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_0558 646453a50f0496de0a6bb53930865bf9 271 SUPERFAMILY SSF52540 32 212 1.28E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0558 646453a50f0496de0a6bb53930865bf9 271 Gene3D G3DSA:3.40.50.300 23 189 2.2E-30 T 11-10-2018 Tbd_0558 646453a50f0496de0a6bb53930865bf9 271 Pfam PF07728 AAA domain (dynein-related subfamily) 38 171 1.9E-36 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_0558 646453a50f0496de0a6bb53930865bf9 271 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 184 267 2.6E-30 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Tbd_0856 ce4b71b5ccd38a48d3fbd19bf285928b 381 PIRSF PIRSF015557 1 381 4.4E-143 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 Tbd_0856 ce4b71b5ccd38a48d3fbd19bf285928b 381 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 5 377 4.9E-151 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 Tbd_0856 ce4b71b5ccd38a48d3fbd19bf285928b 381 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 5 377 1.0E-143 T 11-10-2018 IPR016633 Uncharacterised conserved protein UCP015557 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF08448 PAS fold 41 149 3.1E-14 T 11-10-2018 IPR013656 PAS fold-4 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF08448 PAS fold 299 408 3.9E-20 T 11-10-2018 IPR013656 PAS fold-4 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF08448 PAS fold 549 658 8.3E-14 T 11-10-2018 IPR013656 PAS fold-4 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF08448 PAS fold 176 283 5.0E-23 T 11-10-2018 IPR013656 PAS fold-4 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55785 404 529 1.1E-30 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00267 657 832 1.5E-68 T 11-10-2018 IPR000160 GGDEF domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF00989 PAS fold 419 528 5.3E-15 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00086 363 406 67.0 T 11-10-2018 IPR001610 PAC motif Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00086 107 148 250.0 T 11-10-2018 IPR001610 PAC motif Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00086 489 531 1.7E-7 T 11-10-2018 IPR001610 PAC motif Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00086 616 657 330.0 T 11-10-2018 IPR001610 PAC motif Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55073 673 830 5.1E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 664 831 2.2E-52 T 11-10-2018 IPR000160 GGDEF domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55785 144 274 3.32E-17 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00091 292 359 4.4E-5 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00091 418 484 3.6E-12 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00091 34 100 2.7 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00091 543 609 1.5E-6 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SMART SM00091 167 232 0.16 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55785 37 148 4.04E-11 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55785 527 650 9.5E-22 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.70.270 665 834 4.5E-55 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 670 828 1.9E-49 T 11-10-2018 IPR000160 GGDEF domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.450.20 414 535 2.6E-27 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 SUPERFAMILY SSF55785 278 404 2.65E-20 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.450.20 20 159 2.2E-18 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.450.20 160 287 2.3E-26 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.450.20 536 664 4.8E-24 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 Gene3D G3DSA:3.30.450.20 288 413 3.5E-28 T 11-10-2018 Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 414 538 1.0E-22 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 286 1.5E-7 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 540 664 2.0E-11 T 11-10-2018 IPR000014 PAS domain Tbd_2634 64982e866e2123d6f30b919b99e323ad 843 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 413 2.1E-13 T 11-10-2018 IPR000014 PAS domain Tbd_0205 1cb899a8052724e617c9518e89f06844 166 PIRSF PIRSF016481 1 166 4.9E-43 T 11-10-2018 IPR007446 Pilus assembly protein PilP Tbd_0205 1cb899a8052724e617c9518e89f06844 166 Pfam PF04351 Pilus assembly protein, PilP 23 164 1.9E-48 T 11-10-2018 IPR007446 Pilus assembly protein PilP Tbd_0205 1cb899a8052724e617c9518e89f06844 166 Gene3D G3DSA:2.30.30.830 72 165 3.7E-29 T 11-10-2018 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 SUPERFAMILY SSF55347 128 271 1.21E-59 T 11-10-2018 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 388 2.9E-146 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 134 1.3E-42 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Pfam PF13288 DXP reductoisomerase C-terminal domain 268 383 7.0E-37 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 PIRSF PIRSF006205 3 394 8.1E-145 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 SUPERFAMILY SSF69055 300 389 7.06E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 SUPERFAMILY SSF51735 4 152 1.69E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 148 236 1.2E-35 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Gene3D G3DSA:3.40.50.720 1 152 4.7E-49 T 11-10-2018 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 6 388 45.34 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tbd_0791 652ad3701d0963662b3ae35783897ee4 394 Gene3D G3DSA:1.10.1740.10 308 392 5.5E-26 T 11-10-2018 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 7.5E-148 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 70 9.2E-25 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 176 210 3.5E-15 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Gene3D G3DSA:2.160.10.10 88 258 1.9E-57 T 11-10-2018 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 273 56.466 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 SUPERFAMILY SSF51161 1 257 9.29E-77 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Gene3D G3DSA:1.10.166.10 1 71 4.3E-29 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Tbd_1220 bb10ca6f9e182dd924576ffa17073487 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 167 0.002 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 421 2.4E-128 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 PIRSF PIRSF000505 4 428 2.0E-143 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 428 32.512 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 Gene3D G3DSA:3.65.10.10 20 239 9.4E-140 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 426 5.8E-137 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 SUPERFAMILY SSF55205 1 425 1.96E-128 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tbd_0954 9a587c91c8d499d2b486dada23900c1b 428 Gene3D G3DSA:3.65.10.10 240 421 9.4E-140 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tbd_2694 d110678805f68eebb02a2afdcf625ed3 652 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 152 618 99.058 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tbd_2694 d110678805f68eebb02a2afdcf625ed3 652 Pfam PF13667 ThiC-associated domain 26 112 8.5E-33 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tbd_2694 d110678805f68eebb02a2afdcf625ed3 652 Gene3D G3DSA:3.20.20.540 236 549 4.1E-153 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tbd_2694 d110678805f68eebb02a2afdcf625ed3 652 Pfam PF01964 Radical SAM ThiC family 153 613 4.8E-200 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tbd_2694 d110678805f68eebb02a2afdcf625ed3 652 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 152 616 1.4E-215 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tbd_1533 4d00017aae19764c0fb26afea4f1fd65 80 SUPERFAMILY SSF50182 7 69 4.3E-22 T 11-10-2018 IPR010920 LSM domain superfamily Tbd_1533 4d00017aae19764c0fb26afea4f1fd65 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 67 2.3E-29 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tbd_1533 4d00017aae19764c0fb26afea4f1fd65 80 Gene3D G3DSA:2.30.30.100 1 75 4.1E-30 T 11-10-2018 Tbd_1533 4d00017aae19764c0fb26afea4f1fd65 80 Pfam PF17209 Hfq protein 8 71 4.8E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tbd_1533 4d00017aae19764c0fb26afea4f1fd65 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 67 27.295 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tbd_2657 34021eba5d48be8ec4cffb8299c4edce 125 Pfam PF00581 Rhodanese-like domain 34 118 8.1E-7 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2657 34021eba5d48be8ec4cffb8299c4edce 125 SMART SM00450 20 121 2.1E-8 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2657 34021eba5d48be8ec4cffb8299c4edce 125 SUPERFAMILY SSF52821 34 124 3.8E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2657 34021eba5d48be8ec4cffb8299c4edce 125 Gene3D G3DSA:3.40.250.10 21 125 6.0E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 SUPERFAMILY SSF51735 2 238 3.1E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 238 1.9E-55 T 11-10-2018 Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 Gene3D G3DSA:3.40.50.720 1 239 2.3E-79 T 11-10-2018 Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.5E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2756 9900a0c994c22b4eb53ae17433486e10 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 186 4.7E-6 T 11-10-2018 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 Gene3D G3DSA:3.30.300.20 17 107 3.3E-26 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 Gene3D G3DSA:3.30.1140.32 108 208 4.4E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 SMART SM00322 60 125 3.4E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.8E-92 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 SUPERFAMILY SSF54821 108 206 2.22E-40 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 Pfam PF07650 KH domain 38 110 7.0E-19 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 SUPERFAMILY SSF54814 2 106 5.23E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 7.0E-42 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0411 7080e306543dfc858cfef04fd938cdc7 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.618 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.0E-156 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 7.3E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 7.3E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 7.3E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 7.3E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 7.3E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 Gene3D G3DSA:3.30.420.40 13 332 2.2E-128 T 11-10-2018 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 Pfam PF06723 MreB/Mbl protein 11 340 3.7E-147 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 SUPERFAMILY SSF53067 9 153 2.16E-38 T 11-10-2018 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 Gene3D G3DSA:3.30.420.40 159 322 2.2E-128 T 11-10-2018 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 Gene3D G3DSA:3.90.640.10 191 264 2.2E-128 T 11-10-2018 Tbd_0260 cfbd8fabd88a9ecd0aefb5da5ae15db6 347 SUPERFAMILY SSF53067 155 337 2.8E-46 T 11-10-2018 Tbd_2729 177519934ce3fa69b48a2921e7238a5e 201 SUPERFAMILY SSF52540 1 184 1.36E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2729 177519934ce3fa69b48a2921e7238a5e 201 Gene3D G3DSA:3.40.50.300 3 200 1.2E-38 T 11-10-2018 Tbd_2729 177519934ce3fa69b48a2921e7238a5e 201 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 176 3.7E-18 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:1.10.287.470 135 201 2.9E-8 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:2.40.50.100 233 267 2.5E-11 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:2.40.50.100 69 102 2.4E-7 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 SUPERFAMILY SSF111369 70 125 2.09E-5 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:1.10.287.470 103 124 2.4E-7 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Pfam PF13437 HlyD family secretion protein 233 310 1.7E-14 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 SUPERFAMILY SSF111369 140 199 6.8E-5 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 SUPERFAMILY SSF111369 194 284 1.83E-6 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:2.40.30.170 268 310 2.5E-11 T 11-10-2018 Tbd_1084 3d71672bc8a117e3429471ae4f17f901 356 Gene3D G3DSA:1.10.287.470 205 232 2.5E-11 T 11-10-2018 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Gene3D G3DSA:3.30.450.20 465 580 4.0E-20 T 11-10-2018 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Gene3D G3DSA:3.30.70.270 581 764 3.0E-59 T 11-10-2018 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SUPERFAMILY SSF141868 767 1011 4.97E-85 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Pfam PF00989 PAS fold 465 569 6.7E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Gene3D G3DSA:3.20.20.450 765 1012 4.4E-96 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Pfam PF00563 EAL domain 767 1001 5.7E-70 T 11-10-2018 IPR001633 EAL domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 581 750 4.0E-42 T 11-10-2018 IPR000160 GGDEF domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 466 578 9.5E-17 T 11-10-2018 IPR000014 PAS domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 334 459 4.4E-17 T 11-10-2018 IPR000014 PAS domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Gene3D G3DSA:3.30.450.20 321 464 3.5E-25 T 11-10-2018 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00052 761 1006 1.3E-110 T 11-10-2018 IPR001633 EAL domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SUPERFAMILY SSF55073 588 753 3.3E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SUPERFAMILY SSF55785 325 450 3.06E-23 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00086 532 572 0.0078 T 11-10-2018 IPR001610 PAC motif Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00086 410 452 8.7 T 11-10-2018 IPR001610 PAC motif Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Pfam PF08448 PAS fold 344 454 6.8E-21 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SUPERFAMILY SSF55785 471 580 1.94E-18 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00091 460 526 4.0 T 11-10-2018 IPR000014 PAS domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00091 338 404 4.3E-8 T 11-10-2018 IPR000014 PAS domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 Pfam PF00990 Diguanylate cyclase, GGDEF domain 583 746 9.6E-44 T 11-10-2018 IPR000160 GGDEF domain Tbd_1480 bda8f8b90ffd2205e171e4e5dcc192a7 1012 SMART SM00267 572 751 1.1E-54 T 11-10-2018 IPR000160 GGDEF domain Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 SUPERFAMILY SSF110296 473 863 7.59E-26 T 11-10-2018 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 SUPERFAMILY SSF69318 97 391 7.85E-32 T 11-10-2018 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 105 171 1.7E-7 T 11-10-2018 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 SUPERFAMILY SSF110296 1372 1556 2.88E-17 T 11-10-2018 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 Gene3D G3DSA:2.130.10.10 6 108 6.6E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 Gene3D G3DSA:2.130.10.10 487 692 5.0E-14 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 Gene3D G3DSA:2.130.10.10 1355 1568 9.7E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 SUPERFAMILY SSF69318 1095 1328 6.21E-21 T 11-10-2018 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 Gene3D G3DSA:2.130.10.10 762 860 9.6E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1355 bfdf606f06f67279534f7abb39131f02 1638 SUPERFAMILY SSF50939 17 101 1.57E-5 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 795 809 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 707 732 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 937 952 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 532 554 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 959 979 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 565 580 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 872 893 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 667 676 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 837 844 7.4E-45 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF51230 107 191 4.58E-21 T 11-10-2018 IPR011053 Single hybrid motif Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:3.50.50.60 533 861 4.6E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:4.10.320.10 243 280 1.2E-8 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:2.40.50.100 1 100 1.4E-24 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:2.40.50.100 103 200 4.4E-22 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF51230 2 93 1.31E-22 T 11-10-2018 IPR011053 Single hybrid motif Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF52777 299 502 1.87E-49 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF02817 e3 binding domain 244 276 5.5E-9 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:3.30.559.10 283 505 5.4E-50 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF00364 Biotin-requiring enzyme 109 179 5.5E-13 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF00364 Biotin-requiring enzyme 6 77 2.7E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 879 983 9.5E-24 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF47005 237 279 3.01E-7 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 300 502 1.6E-42 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF51905 519 867 1.51E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 533 552 4.2E-27 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 794 810 4.2E-27 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 664 682 4.2E-27 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 707 725 4.2E-27 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 822 844 4.2E-27 T 11-10-2018 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 SUPERFAMILY SSF55424 879 992 1.01E-28 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 566 576 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:3.50.50.60 676 801 4.6E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0652 96aefb6e980558e71408f2197d52b333 998 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Gene3D G3DSA:3.30.390.30 877 993 6.8E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 532 857 1.1E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_0652 96aefb6e980558e71408f2197d52b333 998 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 131 160 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 2.5E-68 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 237 16.964 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 3.1E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 3.1E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 3.1E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 3.1E-48 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 ProSitePatterns PS01218 TatC family signature. 153 172 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Tbd_1702 78fcc62c75fc3113e1a903bc2bef1da3 269 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 225 3.1E-73 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 SUPERFAMILY SSF46785 11 155 1.11E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 SMART SM00418 17 95 4.5E-22 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 Pfam PF00581 Rhodanese-like domain 125 213 2.5E-17 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 Gene3D G3DSA:3.40.250.10 121 221 3.3E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 SMART SM00450 121 217 1.1E-25 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 SUPERFAMILY SSF52821 112 221 9.04E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 ProSitePatterns PS00380 Rhodanese signature 1. 146 157 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 Pfam PF01022 Bacterial regulatory protein, arsR family 25 70 1.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 6.8E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 6.8E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 6.8E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2736 dfb063137ead61f9ee129b3cf09ed781 227 Gene3D G3DSA:1.10.10.10 4 108 5.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 SUPERFAMILY SSF53850 6 209 7.17E-65 T 11-10-2018 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 5 215 56.381 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 Gene3D G3DSA:3.40.190.10 7 204 1.3E-70 T 11-10-2018 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 150 171 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 Pfam PF01634 ATP phosphoribosyltransferase 55 208 5.6E-50 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 191 5.1E-59 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tbd_1890 92cf9238fc9495e00487cac993f93c00 216 Gene3D G3DSA:3.40.190.10 97 183 1.3E-70 T 11-10-2018 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 263 2.9E-83 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 Gene3D G3DSA:3.40.50.720 116 232 1.6E-83 T 11-10-2018 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.9E-26 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 264 33.052 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 SUPERFAMILY SSF53223 2 101 1.04E-32 T 11-10-2018 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 Gene3D G3DSA:3.40.50.10860 5 251 1.6E-83 T 11-10-2018 Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 190 3.4E-12 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tbd_2504 cfde04bae47ad69d1453caba17d95ea1 265 SUPERFAMILY SSF51735 102 264 5.82E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2052 913de91b71c222522b9a1154650c342d 213 Gene3D G3DSA:3.40.50.300 8 204 3.8E-46 T 11-10-2018 Tbd_2052 913de91b71c222522b9a1154650c342d 213 PIRSF PIRSF000705 1 208 7.7E-58 T 11-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Tbd_2052 913de91b71c222522b9a1154650c342d 213 SUPERFAMILY SSF52540 4 204 3.33E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2052 913de91b71c222522b9a1154650c342d 213 Pfam PF01712 Deoxynucleoside kinase 9 201 2.1E-40 T 11-10-2018 IPR031314 Deoxynucleoside kinase domain Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 SUPERFAMILY SSF46894 139 204 2.86E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 SMART SM00448 5 117 1.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 Pfam PF00072 Response regulator receiver domain 7 118 2.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 SMART SM00421 145 202 1.9E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 3.3E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.3E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 Gene3D G3DSA:3.40.50.12740 5 206 2.6E-53 T 11-10-2018 Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 SUPERFAMILY SSF52172 4 128 4.27E-24 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2786 3b1ec2bc85f89dbe21b421a37989d2cf 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 752 774 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 Gene3D G3DSA:3.20.70.20 228 918 3.4E-247 T 11-10-2018 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 Pfam PF02867 Ribonucleotide reductase, barrel domain 374 908 2.2E-182 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 305 905 1.3E-120 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 Pfam PF03477 ATP cone domain 44 140 7.7E-16 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 SUPERFAMILY SSF51998 373 911 1.01E-180 T 11-10-2018 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 296 370 1.7E-23 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 SUPERFAMILY SSF48168 160 372 1.83E-59 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 659 681 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 449 468 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 687 710 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 763 790 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 621 644 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 PRINTS PR01183 Ribonucleotide reductase large chain signature 584 595 5.3E-44 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1976 3d10870aa6d6407f981e43975cab6a40 974 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 300 911 5.3E-214 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:3.40.50.300 614 933 1.7E-139 T 11-10-2018 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:1.10.8.280 285 401 9.8E-245 T 11-10-2018 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 SUPERFAMILY SSF52540 619 907 1.01E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 SUPERFAMILY SSF52540 1 567 2.1E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 937 22.609 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:1.20.1580.10 689 827 1.7E-139 T 11-10-2018 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 ProSitePatterns PS00211 ABC transporters family signature. 827 841 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:3.40.50.300 6 593 9.8E-245 T 11-10-2018 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:1.20.1580.10 90 490 9.8E-245 T 11-10-2018 Tbd_0436 3d83ddbea0f0b4de723471ad0c7fda67 940 Gene3D G3DSA:3.30.190.20 130 242 9.8E-245 T 11-10-2018 Tbd_2369 21039e48be47998b4c962716529ba57b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 3.2E-18 T 11-10-2018 IPR003004 GspF/PilC family Tbd_2369 21039e48be47998b4c962716529ba57b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 3.2E-18 T 11-10-2018 IPR003004 GspF/PilC family Tbd_2369 21039e48be47998b4c962716529ba57b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 3.2E-18 T 11-10-2018 IPR003004 GspF/PilC family Tbd_2369 21039e48be47998b4c962716529ba57b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 3.2E-18 T 11-10-2018 IPR003004 GspF/PilC family Tbd_2369 21039e48be47998b4c962716529ba57b 407 Gene3D G3DSA:1.20.81.30 59 174 4.8E-31 T 11-10-2018 Tbd_2369 21039e48be47998b4c962716529ba57b 407 Gene3D G3DSA:1.20.81.30 259 370 9.1E-30 T 11-10-2018 Tbd_2369 21039e48be47998b4c962716529ba57b 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 3.6E-31 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_2369 21039e48be47998b4c962716529ba57b 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 5.2E-31 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_0075 fdfa04a6481b43cc3b892cfc357cd838 391 SUPERFAMILY SSF51004 12 389 1.44E-70 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Tbd_0075 fdfa04a6481b43cc3b892cfc357cd838 391 Gene3D G3DSA:2.140.10.20 20 389 1.8E-51 T 11-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily Tbd_0075 fdfa04a6481b43cc3b892cfc357cd838 391 Pfam PF02239 Cytochrome D1 heme domain 26 385 2.0E-106 T 11-10-2018 Tbd_2042 4836f57540098910b0733d7d14654922 240 PIRSF PIRSF037208 3 240 4.5E-89 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Tbd_2042 4836f57540098910b0733d7d14654922 240 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 109 229 1.1E-35 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Tbd_2042 4836f57540098910b0733d7d14654922 240 SUPERFAMILY SSF55729 84 236 2.97E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_2042 4836f57540098910b0733d7d14654922 240 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 9 236 39.917 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Tbd_2042 4836f57540098910b0733d7d14654922 240 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 89 3.0E-19 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.2090.10 713 799 3.4E-268 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.2090.10 182 273 3.4E-268 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1020 1.1E-231 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.2E-37 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82714 712 795 1.96E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82714 185 266 1.44E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Pfam PF00873 AcrB/AcrD/AcrF family 6 1016 2.0E-256 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82693 139 318 7.06E-18 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82866 292 499 5.36E-38 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82866 793 1021 2.09E-42 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:1.20.1640.10 14 509 3.4E-268 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 SUPERFAMILY SSF82693 43 128 4.19E-22 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:1.20.1640.10 510 1015 3.4E-268 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.70.1440 663 857 3.4E-268 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.70.1430 42 807 3.4E-268 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.70.1430 564 661 3.4E-268 T 11-10-2018 Tbd_1746 ed8cb36c5a3c95d6fb44c3ca3faa1113 1034 Gene3D G3DSA:3.30.70.1320 135 327 3.4E-268 T 11-10-2018 Tbd_2583 83624248dcb0372a22de755085d62c91 424 Gene3D G3DSA:3.20.20.140 55 366 1.1E-113 T 11-10-2018 Tbd_2583 83624248dcb0372a22de755085d62c91 424 Pfam PF01979 Amidohydrolase family 50 417 5.9E-14 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tbd_2583 83624248dcb0372a22de755085d62c91 424 SUPERFAMILY SSF51338 1 421 1.16E-25 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_2583 83624248dcb0372a22de755085d62c91 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 22 418 7.5E-91 T 11-10-2018 Tbd_2583 83624248dcb0372a22de755085d62c91 424 SUPERFAMILY SSF51556 54 365 1.42E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_2583 83624248dcb0372a22de755085d62c91 424 Gene3D G3DSA:2.30.40.10 9 418 1.1E-113 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 Gene3D G3DSA:1.10.230.10 268 377 2.2E-145 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 423 6.3E-221 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 Pfam PF00285 Citrate synthase, C-terminal domain 46 412 1.7E-131 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 SUPERFAMILY SSF48256 8 429 6.41E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 360 376 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 380 394 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 296 316 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 165 178 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 219 234 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PRINTS PR00143 Citrate synthase signature 241 269 1.9E-54 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 Gene3D G3DSA:1.10.580.10 57 412 2.2E-145 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 PIRSF PIRSF001369 38 430 2.4E-163 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type Tbd_1187 e3b084f27e03e384c6cf2556a77a76a6 431 Gene3D G3DSA:2.20.28.60 1 50 1.0E-18 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.30.450.20 535 602 3.6E-22 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF02743 Cache domain 36 298 4.8E-21 T 11-10-2018 IPR033479 Double Cache domain 1 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF55785 520 649 2.44E-17 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF55785 664 771 3.14E-24 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.20.20.450 959 1209 2.8E-104 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF158472 336 385 1.31E-12 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.30.450.20 414 534 4.8E-24 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF08447 PAS fold 558 644 4.8E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.30.450.20 177 317 3.4E-6 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:1.10.8.500 336 388 9.1E-13 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00267 773 945 2.7E-72 T 11-10-2018 IPR000160 GGDEF domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF13426 PAS domain 670 772 4.4E-11 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF00672 HAMP domain 336 384 2.9E-16 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF55785 394 521 2.26E-20 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF08448 PAS fold 412 523 1.4E-12 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00086 481 523 1.2E-5 T 11-10-2018 IPR001610 PAC motif Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00086 609 651 8.9E-4 T 11-10-2018 IPR001610 PAC motif Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00086 731 773 1.2E-7 T 11-10-2018 IPR001610 PAC motif Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.30.450.20 658 782 4.5E-32 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00091 659 725 5.1E-5 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00091 535 603 3.8 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00091 406 471 5.7E-10 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00304 336 388 1.4E-18 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 410 530 7.2E-18 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 658 779 1.1E-20 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 532 658 1.9E-6 T 11-10-2018 IPR000014 PAS domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF141868 961 1208 1.27E-92 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:2.10.70.100 605 653 9.1E-13 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SUPERFAMILY SSF55073 789 947 4.55E-53 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF00990 Diguanylate cyclase, GGDEF domain 784 940 5.7E-53 T 11-10-2018 IPR000160 GGDEF domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Pfam PF00563 EAL domain 962 1196 5.5E-75 T 11-10-2018 IPR001633 EAL domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 781 944 2.0E-47 T 11-10-2018 IPR000160 GGDEF domain Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 Gene3D G3DSA:3.30.70.270 783 958 1.8E-65 T 11-10-2018 Tbd_1456 d2cbc762b0f8de1ccbd20a3f6cfe394d 1212 SMART SM00052 955 1201 1.0E-126 T 11-10-2018 IPR001633 EAL domain Tbd_1149 dcda02cc23606e666c1e28befebe4131 343 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 337 25.409 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1149 dcda02cc23606e666c1e28befebe4131 343 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 222 235 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1149 dcda02cc23606e666c1e28befebe4131 343 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 64 79 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1149 dcda02cc23606e666c1e28befebe4131 343 Pfam PF00146 NADH dehydrogenase 25 330 3.5E-128 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 SMART SM00271 8 66 9.0E-18 T 11-10-2018 IPR001623 DnaJ domain Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 PRINTS PR00625 DnaJ domain signature 29 44 4.8E-11 T 11-10-2018 IPR001623 DnaJ domain Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 PRINTS PR00625 DnaJ domain signature 46 66 4.8E-11 T 11-10-2018 IPR001623 DnaJ domain Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 PRINTS PR00625 DnaJ domain signature 11 29 4.8E-11 T 11-10-2018 IPR001623 DnaJ domain Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 Gene3D G3DSA:1.10.287.110 1 83 5.4E-21 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 SUPERFAMILY SSF46565 6 75 2.75E-20 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1999 1b8a713bb6841a3ea86ee62d6f0e2fc7 394 Pfam PF00226 DnaJ domain 9 71 2.3E-17 T 11-10-2018 IPR001623 DnaJ domain Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 SMART SM00267 450 622 5.2E-68 T 11-10-2018 IPR000160 GGDEF domain Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Gene3D G3DSA:1.10.3210.10 9 269 3.5E-65 T 11-10-2018 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 SUPERFAMILY SSF52172 308 454 1.34E-22 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 621 3.2E-52 T 11-10-2018 IPR000160 GGDEF domain Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Gene3D G3DSA:3.40.50.2300 296 444 8.4E-22 T 11-10-2018 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 SMART SM00448 309 423 1.2E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 461 618 1.8E-49 T 11-10-2018 IPR000160 GGDEF domain Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Pfam PF00072 Response regulator receiver domain 311 420 6.9E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Gene3D G3DSA:3.30.70.270 455 626 1.5E-60 T 11-10-2018 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 Pfam PF08668 HDOD domain 13 208 2.7E-44 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 SUPERFAMILY SSF109604 11 277 1.07E-51 T 11-10-2018 Tbd_2023 fafd08518fe1245cfaa825ac10f0a8f1 632 SUPERFAMILY SSF55073 466 621 4.79E-52 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 Gene3D G3DSA:1.10.1670.10 7 208 2.8E-82 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 Pfam PF14815 NUDIX domain 233 338 3.9E-22 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 263 1.1E-100 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 SUPERFAMILY SSF48150 2 222 2.83E-70 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 SMART SM00478 37 188 4.3E-47 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 165 2.7E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 Gene3D G3DSA:1.10.340.30 19 130 2.8E-82 T 11-10-2018 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 SUPERFAMILY SSF55811 218 340 4.45E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_2130 96bd7ce1c5c26c8ccc2e2e975750b0bb 344 Gene3D G3DSA:3.90.79.10 230 343 1.8E-15 T 11-10-2018 Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 SMART SM00382 122 256 0.0033 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 Gene3D G3DSA:3.40.50.300 101 347 7.8E-104 T 11-10-2018 Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 2.2E-156 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 SUPERFAMILY SSF52540 5 330 3.34E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 Gene3D G3DSA:3.30.450.90 1 100 1.5E-35 T 11-10-2018 Tbd_2419 b97c893a1cc1b4657081dd1194563752 347 Pfam PF00437 Type II/IV secretion system protein 12 265 4.2E-48 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SMART SM00028 182 215 260.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SMART SM00028 78 111 6.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SMART SM00028 148 181 0.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SMART SM00028 44 77 2.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SMART SM00028 112 144 310.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 Pfam PF13181 Tetratricopeptide repeat 79 110 0.0024 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 Gene3D G3DSA:1.25.40.10 38 259 2.5E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 247 1.6E-66 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 Pfam PF14559 Tetratricopeptide repeat 161 216 4.0E-6 T 11-10-2018 Tbd_0592 b3b07c9a664c21964c722ec18ca71164 261 SUPERFAMILY SSF48452 39 236 1.56E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 SUPERFAMILY SSF53955 469 628 4.5E-49 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 SUPERFAMILY SSF48435 22 466 4.45E-112 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 Gene3D G3DSA:1.25.20.10 27 377 3.2E-83 T 11-10-2018 Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 Pfam PF14718 Soluble lytic murein transglycosylase L domain 397 456 1.9E-10 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 Pfam PF01464 Transglycosylase SLT domain 473 582 2.2E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Tbd_2362 16c4d6c8e1faeda2d2227baa4435f729 654 Gene3D G3DSA:1.10.530.10 464 625 2.8E-49 T 11-10-2018 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 Gene3D G3DSA:3.40.190.290 92 299 7.8E-46 T 11-10-2018 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 Pfam PF03466 LysR substrate binding domain 91 293 8.3E-52 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 Gene3D G3DSA:1.10.10.10 1 87 8.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 SUPERFAMILY SSF46785 4 88 7.1E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 SUPERFAMILY SSF53850 92 297 1.99E-46 T 11-10-2018 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2651 ae55043bcef971cfc05005cb5b3cff4f 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.6E-23 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 Gene3D G3DSA:1.25.40.10 190 299 7.4E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 Gene3D G3DSA:1.25.40.10 300 382 1.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 SUPERFAMILY SSF48452 190 360 9.23E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 SMART SM00028 231 264 0.41 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 SMART SM00028 331 364 0.022 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0548 04372e54d7b20c8155a82c4697194f68 382 SMART SM00028 297 330 65.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 SMART SM01097 5 135 2.3E-91 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 134 4.2E-52 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 Gene3D G3DSA:3.50.30.20 4 152 4.5E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 Gene3D G3DSA:3.40.50.880 153 374 5.0E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00097 Anthranilate synthase component II signature 234 243 2.7E-5 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00097 Anthranilate synthase component II signature 262 273 2.7E-5 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00097 Anthranilate synthase component II signature 347 360 2.7E-5 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 1.1E-10 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.1E-10 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.1E-10 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 373 1.4E-142 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 Pfam PF00117 Glutamine amidotransferase class-I 196 370 4.6E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 SUPERFAMILY SSF52317 155 375 1.64E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 1.6E-39 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 1.6E-39 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 1.6E-39 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 1.6E-39 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 1.6E-39 T 11-10-2018 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 SUPERFAMILY SSF52021 6 150 1.15E-56 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1127 8453acd6bedfe4086dcd3f7844b46132 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 376 48.459 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_2732 bf397bf7aff9ebdc36b34c86ec9c3375 303 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 67 155 1.6E-17 T 11-10-2018 IPR029095 NarX-like, N-terminal Tbd_2732 bf397bf7aff9ebdc36b34c86ec9c3375 303 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 186 269 1.8E-7 T 11-10-2018 IPR029095 NarX-like, N-terminal Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 SUPERFAMILY SSF69754 5 108 1.83E-24 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 Pfam PF00313 'Cold-shock' DNA-binding domain 118 175 4.7E-5 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 SUPERFAMILY SSF50249 106 176 1.08E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 5 104 1.8E-12 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 Gene3D G3DSA:2.40.50.140 113 181 3.1E-8 T 11-10-2018 Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 101 7.6E-19 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tbd_1447 d4bbc6c9a6b347ace6098994d2c85013 189 Gene3D G3DSA:3.30.160.100 4 108 1.2E-17 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 379 592 3.8E-44 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 SUPERFAMILY SSF56784 381 684 4.85E-52 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 598 1.6E-27 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 232 246 1.6E-27 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 536 1.6E-27 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 1.6E-27 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 614 1.6E-27 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 Pfam PF00122 E1-E2 ATPase 182 360 5.4E-50 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 SUPERFAMILY SSF81653 193 282 8.5E-24 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 120 686 1.1E-177 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 Gene3D G3DSA:2.70.150.20 175 287 1.8E-36 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 SUPERFAMILY SSF81665 121 641 6.93E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 Gene3D G3DSA:3.40.50.1000 376 629 1.1E-88 T 11-10-2018 IPR023214 HAD superfamily Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 579 595 4.3E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 610 635 4.3E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 551 567 4.3E-9 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 Gene3D G3DSA:3.40.1110.10 393 511 1.1E-88 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 384 390 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 102 688 1.1E-178 T 11-10-2018 Tbd_2740 eae49b0233b111eeb2cbec0099762a73 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 157 658 1.2E-81 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 SUPERFAMILY SSF52540 246 495 1.54E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 Gene3D G3DSA:3.90.1570.50 107 218 5.1E-8 T 11-10-2018 Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 Gene3D G3DSA:3.40.50.300 647 742 6.3E-18 T 11-10-2018 Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 Pfam PF04851 Type III restriction enzyme, res subunit 278 490 2.3E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 116 204 9.5E-14 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Tbd_2685 d16c36c850ca7d0b500996251a5ea014 1009 SMART SM00487 274 515 4.9E-8 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_0315 284954f1716403205bb6ceebe37947ee 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 74.941 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 Gene3D G3DSA:3.40.50.1970 1 172 1.4E-67 T 11-10-2018 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 4.3E-121 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 Gene3D G3DSA:1.20.1090.10 173 357 4.6E-68 T 11-10-2018 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 SUPERFAMILY SSF56796 4 355 1.57E-120 T 11-10-2018 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 Pfam PF01761 3-dehydroquinate synthase 67 324 2.8E-109 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_0315 284954f1716403205bb6ceebe37947ee 359 PIRSF PIRSF001455 5 356 1.7E-110 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Gene3D G3DSA:3.40.50.970 1 185 1.4E-57 T 11-10-2018 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Gene3D G3DSA:3.40.50.970 375 550 3.6E-44 T 11-10-2018 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 SUPERFAMILY SSF52518 377 548 3.66E-43 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Gene3D G3DSA:3.40.50.1220 191 362 1.6E-42 T 11-10-2018 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 177 8.0E-52 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 334 5.3E-33 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 SUPERFAMILY SSF52467 161 355 1.45E-38 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 399 537 2.7E-31 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tbd_0662 f900d9e6b5785e2bcb4cddfc36752542 553 SUPERFAMILY SSF52518 1 186 7.69E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 SMART SM00382 169 312 8.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Pfam PF00072 Response regulator receiver domain 10 123 1.4E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Gene3D G3DSA:1.10.8.60 320 386 2.7E-12 T 11-10-2018 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 SUPERFAMILY SSF52172 5 194 5.98E-24 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 SMART SM00448 7 124 1.3E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 9.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 9.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Pfam PF02954 Bacterial regulatory protein, Fis family 432 473 2.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Gene3D G3DSA:1.10.10.60 389 475 8.7E-15 T 11-10-2018 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 SUPERFAMILY SSF52540 148 391 1.24E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Gene3D G3DSA:3.40.50.2300 3 140 2.4E-20 T 11-10-2018 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Gene3D G3DSA:3.40.50.300 141 319 7.7E-64 T 11-10-2018 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 Pfam PF00158 Sigma-54 interaction domain 149 315 7.1E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 SUPERFAMILY SSF46689 404 474 7.94E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0551 be3e94afb542c2fe32ea6f26f33a8711 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 1 894 18.741 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Gene3D G3DSA:1.20.120.330 258 412 1.3E-53 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 SUPERFAMILY SSF81301 6 259 3.74E-71 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 SUPERFAMILY SSF81301 492 764 3.92E-78 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 SUPERFAMILY SSF81593 260 409 1.96E-43 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Pfam PF08335 GlnD PII-uridylyltransferase 270 409 8.8E-44 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Pfam PF08335 GlnD PII-uridylyltransferase 776 864 4.7E-6 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Gene3D G3DSA:1.20.120.330 761 893 3.0E-35 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 SUPERFAMILY SSF81593 764 892 1.49E-28 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Gene3D G3DSA:1.20.120.1510 424 528 1.2E-20 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 520 753 1.0E-72 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 6 244 4.5E-61 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Gene3D G3DSA:3.30.460.100 15 253 5.4E-63 T 11-10-2018 Tbd_0503 03d3498b6f3acd3c3fbfc8b24f2c34a2 894 Gene3D G3DSA:3.30.460.100 529 760 6.0E-76 T 11-10-2018 Tbd_2216 047621ab3be1a1ba9e13dedb338beca5 329 ProSitePatterns PS01125 ROK family signature. 134 161 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tbd_2216 047621ab3be1a1ba9e13dedb338beca5 329 Pfam PF00480 ROK family 7 328 5.9E-72 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tbd_2216 047621ab3be1a1ba9e13dedb338beca5 329 SUPERFAMILY SSF53067 7 328 2.46E-58 T 11-10-2018 Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 PIRSF PIRSF000495 3 213 1.5E-68 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 SUPERFAMILY SSF52317 5 211 2.96E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 Gene3D G3DSA:3.40.50.880 2 222 3.4E-71 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 Pfam PF00117 Glutamine amidotransferase class-I 7 201 4.8E-19 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 210 3.0E-63 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tbd_1710 0eec0f8ba2897a2d33d41ae4d415f9f0 228 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 211 34.918 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 453 5.8E-185 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 299 1.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 428 6.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Gene3D G3DSA:3.90.550.10 2 226 1.4E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 SUPERFAMILY SSF51161 253 435 1.43E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 SUPERFAMILY SSF53448 5 251 2.48E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Pfam PF12804 MobA-like NTP transferase domain 8 125 5.4E-20 T 11-10-2018 IPR025877 MobA-like NTP transferase Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 41.905 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tbd_2794 8b8944c9a7e78b0423666be4a0c8cebd 458 Gene3D G3DSA:2.160.10.10 227 455 9.6E-65 T 11-10-2018 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Gene3D G3DSA:1.10.220.120 48 110 1.3E-27 T 11-10-2018 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 SUPERFAMILY SSF88659 549 650 1.38E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Gene3D G3DSA:1.10.10.10 492 567 2.3E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF04539 Sigma-70 region 3 498 574 1.2E-24 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF04542 Sigma-70 region 2 419 488 1.9E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF03979 Sigma-70 factor, region 1.1 50 127 6.3E-29 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Gene3D G3DSA:1.10.10.10 569 652 2.7E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Gene3D G3DSA:1.10.601.10 160 488 1.4E-126 T 11-10-2018 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF00140 Sigma-70 factor, region 1.2 145 176 2.6E-14 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 443 456 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF04545 Sigma-70, region 4 587 640 1.1E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 PRINTS PR00046 Major sigma-70 factor signature 443 456 7.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 PRINTS PR00046 Major sigma-70 factor signature 612 627 7.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 PRINTS PR00046 Major sigma-70 factor signature 467 475 7.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 PRINTS PR00046 Major sigma-70 factor signature 591 603 7.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 PRINTS PR00046 Major sigma-70 factor signature 627 638 7.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Pfam PF04546 Sigma-70, non-essential region 186 388 9.1E-64 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 SUPERFAMILY SSF88659 492 565 1.66E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_2388 f24c90db85d220c130a3711fc38efede 656 SUPERFAMILY SSF88946 162 486 1.57E-98 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 415 651 5.1E-118 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 612 638 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 50 652 42.954 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Tbd_2388 f24c90db85d220c130a3711fc38efede 656 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 415 640 2.3E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_2744 8e18a992ee1df3d5f14e5ff212799951 89 Pfam PF00550 Phosphopantetheine attachment site 11 83 5.9E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Tbd_2744 8e18a992ee1df3d5f14e5ff212799951 89 SUPERFAMILY SSF47336 5 85 8.64E-11 T 11-10-2018 IPR036736 ACP-like superfamily Tbd_2744 8e18a992ee1df3d5f14e5ff212799951 89 Gene3D G3DSA:1.10.1200.10 7 89 1.1E-15 T 11-10-2018 IPR036736 ACP-like superfamily Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 PIRSF PIRSF000167 1 452 9.6E-167 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 Pfam PF04055 Radical SAM superfamily 55 226 1.6E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 SUPERFAMILY SSF102114 6 442 2.62E-134 T 11-10-2018 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 SMART SM00729 49 267 5.7E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 455 2.2E-179 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 Gene3D G3DSA:3.80.30.20 2 361 2.3E-120 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 Gene3D G3DSA:1.10.10.920 362 456 9.8E-31 T 11-10-2018 Tbd_0635 53f73fedd412d41e433261da8a030b4b 456 Pfam PF06969 HemN C-terminal domain 361 429 3.4E-8 T 11-10-2018 IPR010723 HemN, C-terminal Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 Gene3D G3DSA:3.30.70.3340 5 122 1.5E-41 T 11-10-2018 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 SUPERFAMILY SSF55124 8 124 4.51E-42 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 22 355 1.9E-152 T 11-10-2018 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00633+1.8.99.5|KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 120 335 3.3E-25 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 SUPERFAMILY SSF54862 202 249 8.09E-8 T 11-10-2018 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 234 245 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 43 107 9.9E-10 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 Gene3D G3DSA:3.30.413.10 124 342 3.6E-90 T 11-10-2018 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 SUPERFAMILY SSF56014 119 345 6.32E-35 T 11-10-2018 Tbd_2484 ce9bd4c01e5b08662977229c901fa5fb 356 Gene3D G3DSA:3.30.70.20 189 249 3.6E-90 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 685 701 5.7E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 713 729 5.7E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 744 769 5.7E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 561 579 5.7E-6 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Gene3D G3DSA:3.30.70.100 103 170 3.9E-12 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Gene3D G3DSA:3.40.50.1000 499 765 9.0E-72 T 11-10-2018 IPR023214 HAD superfamily Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 726 2.3E-35 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Gene3D G3DSA:2.70.150.20 306 424 1.2E-32 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Gene3D G3DSA:3.40.1110.10 529 645 9.0E-72 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 370 384 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 736 748 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 532 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 649 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 9.0E-24 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 SUPERFAMILY SSF56784 517 813 3.3E-53 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Pfam PF00122 E1-E2 ATPase 332 497 2.9E-44 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 238 815 1.2E-157 T 11-10-2018 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 796 8.8E-71 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 SUPERFAMILY SSF81665 279 783 1.44E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 256 815 6.3E-168 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 17 97 2.5E-24 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 Pfam PF00403 Heavy-metal-associated domain 109 166 3.2E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 SUPERFAMILY SSF81653 333 419 3.01E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 SUPERFAMILY SSF55008 100 174 1.44E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_2044 17ba2e7b10d862dbfb4ddd3e87eeb108 834 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 520 526 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 268 2.8E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SMART SM00482 665 871 5.7E-120 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:3.30.420.10 308 521 5.2E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 13 174 1.4E-49 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 TIGRFAM TIGR00593 pola: DNA polymerase I 13 907 1.4E-273 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SUPERFAMILY SSF47807 175 289 5.68E-33 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Pfam PF00476 DNA polymerase family A 531 904 7.0E-148 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SMART SM00475 10 265 2.0E-113 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:3.30.70.370 643 903 7.7E-108 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SUPERFAMILY SSF56672 502 907 7.56E-154 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:3.40.50.1010 13 281 2.5E-88 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SMART SM00474 310 496 1.6E-21 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SUPERFAMILY SSF53098 313 495 1.9E-38 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SUPERFAMILY SSF88723 8 174 5.89E-54 T 11-10-2018 IPR029060 PIN-like domain superfamily Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Pfam PF01612 3'-5' exonuclease 310 495 1.2E-25 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 ProSitePatterns PS00447 DNA polymerase family A signature. 733 752 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 672 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 702 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 770 781 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 867 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 758 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 722 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 634 656 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 840 2.8E-76 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:1.10.150.20 178 250 2.5E-88 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:1.20.1060.10 522 637 2.4E-37 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 Gene3D G3DSA:1.10.150.20 688 831 7.7E-108 T 11-10-2018 Tbd_2453 03a1dcf78f055d0311340fdc37481ec9 907 SMART SM00279 177 212 1.7E-11 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.597 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 SUPERFAMILY SSF50129 1 95 2.75E-35 T 11-10-2018 IPR011032 GroES-like superfamily Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 SMART SM00883 2 94 6.1E-58 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.2E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.2E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.2E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 Gene3D G3DSA:2.30.33.40 1 96 2.7E-39 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Tbd_0092 584b3eaa0b6ca9a129756f5148a77d58 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.1E-36 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 PIRSF PIRSF006004 1 371 1.0E-149 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 360 1.2E-136 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 358 74.774 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 Gene3D G3DSA:3.20.20.70 64 343 2.0E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 SUPERFAMILY SSF102114 99 338 3.27E-13 T 11-10-2018 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 Pfam PF04055 Radical SAM superfamily 106 289 1.4E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0591 ccd267591bc98c629d403c4892c25cd1 372 Gene3D G3DSA:1.10.150.530 3 63 2.2E-23 T 11-10-2018 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Pfam PF07499 RuvA, C-terminal domain 146 189 3.9E-11 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Gene3D G3DSA:2.40.50.140 1 66 9.9E-26 T 11-10-2018 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Pfam PF14520 Helix-hairpin-helix domain 72 129 4.7E-18 T 11-10-2018 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Gene3D G3DSA:1.10.8.10 134 191 7.9E-6 T 11-10-2018 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 188 1.0E-51 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 189 29.761 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Gene3D G3DSA:1.10.150.20 67 132 5.4E-24 T 11-10-2018 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SUPERFAMILY SSF50249 1 63 1.03E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SMART SM00278 73 92 0.23 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SMART SM00278 108 127 0.027 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SMART SM00278 33 52 2300.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SUPERFAMILY SSF46929 146 190 4.84E-7 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 Pfam PF01330 RuvA N terminal domain 1 62 5.9E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tbd_2213 8336dbdbb72923fd8d26635e27a47a2c 191 SUPERFAMILY SSF47781 67 132 5.56E-20 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 SMART SM00382 156 299 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Pfam PF00158 Sigma-54 interaction domain 136 302 8.6E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Gene3D G3DSA:3.40.50.300 125 306 5.2E-66 T 11-10-2018 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 SUPERFAMILY SSF52172 1 180 5.98E-44 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 SUPERFAMILY SSF52540 135 373 8.37E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Gene3D G3DSA:1.10.10.60 385 439 3.8E-10 T 11-10-2018 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 SMART SM00448 4 115 1.6E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Gene3D G3DSA:3.40.50.2300 1 121 2.2E-34 T 11-10-2018 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 SUPERFAMILY SSF46689 349 437 2.87E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 Gene3D G3DSA:1.10.8.60 307 384 3.4E-25 T 11-10-2018 Tbd_2771 b9139af05831c1253901fd2cef6d378d 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 413 2.7E-19 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 SMART SM00984 313 413 1.7E-28 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 Gene3D G3DSA:3.40.50.720 1 192 9.9E-57 T 11-10-2018 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 SUPERFAMILY SSF51735 4 188 2.51E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 PIRSF PIRSF000124 2 426 3.9E-55 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 PIRSF PIRSF500136 1 426 1.0E-140 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 SUPERFAMILY SSF52413 298 424 1.83E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 396 1.6E-113 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 Gene3D G3DSA:3.40.50.720 196 425 1.2E-55 T 11-10-2018 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 SUPERFAMILY SSF48179 197 288 1.62E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 174 3.0E-28 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0098 456530c72622367eefa9e53aeeddd09d 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 3.7E-23 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00086 449 489 2.1 T 11-10-2018 IPR001610 PAC motif Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00086 573 614 4.2 T 11-10-2018 IPR001610 PAC motif Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00091 501 570 0.0076 T 11-10-2018 IPR000014 PAS domain Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00091 373 439 4.8E-14 T 11-10-2018 IPR000014 PAS domain Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Gene3D G3DSA:3.30.450.20 359 486 3.7E-34 T 11-10-2018 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF55785 360 487 3.66E-30 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 743 853 1.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 852 8.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 782 796 8.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 833 8.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 499 621 4.5E-6 T 11-10-2018 IPR000014 PAS domain Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 369 495 7.2E-29 T 11-10-2018 IPR000014 PAS domain Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Pfam PF00989 PAS fold 374 486 9.7E-16 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00387 743 855 1.4E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Gene3D G3DSA:3.30.450.20 487 609 1.9E-12 T 11-10-2018 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF47384 619 700 1.08E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF103190 229 300 4.08E-7 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF55785 486 612 6.28E-14 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Pfam PF00512 His Kinase A (phospho-acceptor) domain 636 699 1.2E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Gene3D G3DSA:1.10.287.130 610 700 4.6E-20 T 11-10-2018 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF55874 701 853 4.85E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Gene3D G3DSA:3.30.565.10 705 855 6.7E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Gene3D G3DSA:3.30.450.20 87 220 2.6E-26 T 11-10-2018 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SMART SM00388 634 702 3.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 SUPERFAMILY SSF103190 56 220 6.54E-36 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tbd_1193 e584f27afb41d3424ca9fc471864c614 857 Pfam PF13188 PAS domain 502 552 1.1E-4 T 11-10-2018 IPR000014 PAS domain Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Gene3D G3DSA:3.30.420.40 22 377 2.0E-108 T 11-10-2018 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 619 43.513 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Gene3D G3DSA:1.20.1270.10 523 618 1.0E-26 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 1.2E-272 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 SUPERFAMILY SSF53067 199 380 7.92E-46 T 11-10-2018 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 SUPERFAMILY SSF100934 507 617 1.96E-34 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Gene3D G3DSA:3.90.640.10 237 314 2.0E-108 T 11-10-2018 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 SUPERFAMILY SSF53067 19 195 6.26E-51 T 11-10-2018 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 SUPERFAMILY SSF100920 386 536 1.11E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 332 348 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 210 220 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 151 171 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 363 383 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.8E-53 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Pfam PF00012 Hsp70 protein 21 603 2.1E-179 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Gene3D G3DSA:3.30.420.40 193 364 2.0E-108 T 11-10-2018 Tbd_1168 89e979cd738a779f64f269ccedf2c9cc 620 Gene3D G3DSA:2.60.34.10 392 522 1.7E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 SUPERFAMILY SSF103473 27 429 6.28E-57 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 Gene3D G3DSA:1.20.1250.20 247 431 5.8E-29 T 11-10-2018 Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 Gene3D G3DSA:1.20.1250.20 25 233 3.2E-21 T 11-10-2018 Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 Pfam PF07690 Major Facilitator Superfamily 28 213 2.2E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 Pfam PF07690 Major Facilitator Superfamily 261 429 1.9E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_2737 7ba1ec87df5c1ed8d2c70aa524043229 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 17 547 5.2E-124 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PIRSF PIRSF004862 9 548 1.8E-150 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PRINTS PR01009 Flagellar M-ring protein signature 121 139 3.2E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PRINTS PR01009 Flagellar M-ring protein signature 196 214 3.2E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PRINTS PR01009 Flagellar M-ring protein signature 267 285 3.2E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PRINTS PR01009 Flagellar M-ring protein signature 356 380 3.2E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 PRINTS PR01009 Flagellar M-ring protein signature 153 167 3.2E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 Pfam PF08345 Flagellar M-ring protein C-terminal 255 432 1.2E-49 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 Gene3D G3DSA:3.30.300.30 120 223 6.3E-12 T 11-10-2018 Tbd_1600 1a343784ae1bcac9bbbb7be4eaf08d19 548 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 3.6E-77 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF Tbd_2367 029b6a27aa1ddf46daf9a35e4cf3d388 202 Pfam PF01121 Dephospho-CoA kinase 3 179 3.6E-59 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tbd_2367 029b6a27aa1ddf46daf9a35e4cf3d388 202 Gene3D G3DSA:3.40.50.300 1 201 2.8E-65 T 11-10-2018 Tbd_2367 029b6a27aa1ddf46daf9a35e4cf3d388 202 SUPERFAMILY SSF52540 1 191 4.85E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2367 029b6a27aa1ddf46daf9a35e4cf3d388 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 7.4E-46 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tbd_2367 029b6a27aa1ddf46daf9a35e4cf3d388 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 27.787 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Gene3D G3DSA:3.40.50.620 204 400 1.4E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Pfam PF00117 Glutamine amidotransferase class-I 7 194 6.9E-39 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 SUPERFAMILY SSF54810 400 520 3.92E-50 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.0E-7 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.0E-7 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.0E-7 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Gene3D G3DSA:3.30.300.10 401 520 1.0E-51 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 SUPERFAMILY SSF52402 192 414 1.98E-59 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 1.5E-5 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 1.5E-5 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 5 19 1.5E-5 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Pfam PF00958 GMP synthase C terminal domain 428 519 5.9E-44 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Pfam PF02540 NAD synthase 210 287 2.5E-9 T 11-10-2018 IPR022310 NAD/GMP synthase Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00097 Anthranilate synthase component II signature 49 58 1.9E-6 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00097 Anthranilate synthase component II signature 76 87 1.9E-6 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.9E-6 T 11-10-2018 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 SUPERFAMILY SSF52317 1 232 2.38E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 520 56.578 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 520 3.0E-150 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 2.7E-77 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tbd_1751 cb7b80f662cfbd447bac5140e92c5c25 520 Gene3D G3DSA:3.40.50.880 4 201 2.2E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 8 307 9.4E-101 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 Pfam PF07475 HPr Serine kinase C-terminal domain 132 303 3.5E-64 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 SUPERFAMILY SSF75138 12 134 6.93E-28 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 SUPERFAMILY SSF53795 135 304 2.75E-34 T 11-10-2018 Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 Gene3D G3DSA:3.40.1390.20 12 133 3.2E-24 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 Pfam PF02603 HPr Serine kinase N terminus 7 130 2.9E-23 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 Gene3D G3DSA:3.40.50.300 134 312 1.6E-64 T 11-10-2018 Tbd_0530 5912a10946bdae5952d2c99a25a8d2fc 312 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 6 311 35.473 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 237 7.3E-35 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 609 3.8E-80 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Gene3D G3DSA:3.30.1390.30 85 160 2.2E-39 T 11-10-2018 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 SUPERFAMILY SSF56601 254 616 1.04E-105 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 2 617 49.49 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Gene3D G3DSA:3.40.710.10 249 622 2.3E-107 T 11-10-2018 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 Gene3D G3DSA:3.90.1310.10 65 248 2.2E-39 T 11-10-2018 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 614 1.0E-236 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0263 dd2bc7926036d4ffa98fbd7939f98269 630 SUPERFAMILY SSF56519 56 252 1.29E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 79 209 1.9E-55 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 Gene3D G3DSA:3.30.700.10 104 209 3.1E-38 T 11-10-2018 Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 78 100 1.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 PRINTS PR00813 Bacterial general secretion pathway protein G signature 80 105 1.3E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 PRINTS PR00813 Bacterial general secretion pathway protein G signature 116 134 1.3E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 Pfam PF07963 Prokaryotic N-terminal methylation motif 77 99 3.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 Pfam PF08334 Type II secretion system (T2SS), protein G 104 209 3.0E-44 T 11-10-2018 IPR013545 Type II secretion system protein G Tbd_1432 2327fdc1ffdeac2eb45e5b22d67f6b4f 209 SUPERFAMILY SSF54523 107 209 4.5E-36 T 11-10-2018 Tbd_2436 38bfcecae40d6be8748eb0220e935b13 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 47 183 7.7E-15 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2436 38bfcecae40d6be8748eb0220e935b13 208 Gene3D G3DSA:1.10.340.30 40 149 7.6E-68 T 11-10-2018 Tbd_2436 38bfcecae40d6be8748eb0220e935b13 208 Gene3D G3DSA:1.10.1670.40 15 199 7.6E-68 T 11-10-2018 Tbd_2436 38bfcecae40d6be8748eb0220e935b13 208 SMART SM00478 50 202 3.2E-14 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2436 38bfcecae40d6be8748eb0220e935b13 208 SUPERFAMILY SSF48150 30 201 2.27E-47 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tbd_2650 ba79110fb8b0b0c239bf6b13ca0026fe 667 Pfam PF12288 Carboxysome shell peptide mid-region 14 469 6.1E-171 T 11-10-2018 IPR020990 Carboxysome shell protein Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 PIRSF PIRSF005644 3 335 1.3E-101 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 Pfam PF02769 AIR synthase related protein, C-terminal domain 163 308 2.0E-16 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 SUPERFAMILY SSF56042 160 330 1.08E-37 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 Gene3D G3DSA:3.30.1330.10 10 154 4.8E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 SUPERFAMILY SSF55326 6 152 1.74E-28 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 7 335 5.9E-111 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 Pfam PF00586 AIR synthase related protein, N-terminal domain 52 151 5.6E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Tbd_1386 c6eb0c46b55eb9b948ec1ecd57169bd2 335 Gene3D G3DSA:3.90.650.10 159 335 4.8E-47 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Gene3D G3DSA:1.25.50.10 566 924 1.6E-108 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 316 1.3E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 320 332 1.3E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 1.3E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 265 275 1.3E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 451 564 2.7E-23 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 SUPERFAMILY SSF55486 211 456 9.89E-79 T 11-10-2018 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Gene3D G3DSA:1.10.390.10 287 450 3.3E-66 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 922 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 568 924 1.6E-122 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Gene3D G3DSA:2.60.40.1730 16 201 3.8E-62 T 11-10-2018 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Gene3D G3DSA:1.10.1740.60 202 286 3.2E-42 T 11-10-2018 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 SUPERFAMILY SSF63737 9 198 3.27E-37 T 11-10-2018 Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Gene3D G3DSA:2.60.40.1840 451 565 9.3E-27 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Tbd_0899 b7aab8c6aec0d8fb109d70c5cf4931cd 925 Pfam PF01433 Peptidase family M1 domain 215 446 1.9E-59 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 Gene3D G3DSA:3.50.50.60 5 396 3.0E-153 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 Pfam PF00890 FAD binding domain 5 384 1.3E-99 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 SUPERFAMILY SSF56425 230 345 3.44E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 SUPERFAMILY SSF51905 2 438 7.48E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.7E-6 T 11-10-2018 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 369 5.7E-6 T 11-10-2018 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 510 4.6E-193 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 Pfam PF02910 Fumarate reductase flavoprotein C-term 431 511 4.5E-12 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 Gene3D G3DSA:3.90.700.10 240 350 3.0E-153 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 Gene3D G3DSA:1.20.58.100 415 527 1.1E-39 T 11-10-2018 Tbd_2096 dd9d495f7de9c15b7605ec5143b2df32 541 SUPERFAMILY SSF46977 415 513 6.02E-29 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2218 4fbfae939b527d9b7bea19cb531b9937 558 Pfam PF15975 Flotillin 403 529 2.0E-38 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 Tbd_2218 4fbfae939b527d9b7bea19cb531b9937 558 SUPERFAMILY SSF117892 58 202 3.14E-20 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Tbd_2218 4fbfae939b527d9b7bea19cb531b9937 558 Pfam PF01145 SPFH domain / Band 7 family 39 187 3.9E-16 T 11-10-2018 IPR001107 Band 7 domain Tbd_2218 4fbfae939b527d9b7bea19cb531b9937 558 Gene3D G3DSA:3.30.479.30 67 187 8.1E-23 T 11-10-2018 Tbd_2218 4fbfae939b527d9b7bea19cb531b9937 558 SMART SM00244 27 196 6.7E-7 T 11-10-2018 IPR001107 Band 7 domain Tbd_0757 4ba2ba7fb7495d02756d9d5d547c3875 261 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 6.8E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0757 4ba2ba7fb7495d02756d9d5d547c3875 261 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0757 4ba2ba7fb7495d02756d9d5d547c3875 261 SUPERFAMILY SSF54523 10 118 5.96E-6 T 11-10-2018 Tbd_0757 4ba2ba7fb7495d02756d9d5d547c3875 261 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.5E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 SMART SM01091 196 274 2.5E-30 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 Pfam PF03471 Transporter associated domain 198 273 2.8E-22 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 Gene3D G3DSA:3.10.580.10 41 187 3.3E-51 T 11-10-2018 Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 Pfam PF00571 CBS domain 88 118 3.3E-4 T 11-10-2018 IPR000644 CBS domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 Pfam PF00571 CBS domain 124 179 6.3E-7 T 11-10-2018 IPR000644 CBS domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 SMART SM00116 70 119 11.0 T 11-10-2018 IPR000644 CBS domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 SMART SM00116 131 179 0.94 T 11-10-2018 IPR000644 CBS domain Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 Gene3D G3DSA:3.30.465.10 188 274 1.7E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 SUPERFAMILY SSF54631 57 191 6.06E-31 T 11-10-2018 Tbd_2703 4bb5897c960d6f3b625a6f80e6ed175f 285 SUPERFAMILY SSF56176 194 279 3.82E-24 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 215 354 4.0E-31 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 587 706 6.0E-34 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 189 1.7E-21 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 525 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 652 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 616 635 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 546 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 7.0E-39 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Gene3D G3DSA:3.40.1110.10 342 521 8.3E-296 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Gene3D G3DSA:2.70.150.10 24 235 8.3E-296 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Pfam PF00702 haloacid dehalogenase-like hydrolase 330 630 1.9E-22 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 SUPERFAMILY SSF81665 11 873 8.5E-136 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Gene3D G3DSA:3.40.50.1000 329 661 8.3E-296 T 11-10-2018 IPR023214 HAD superfamily Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Pfam PF00122 E1-E2 ATPase 119 312 4.8E-55 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 SUPERFAMILY SSF81660 339 518 7.19E-42 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 SUPERFAMILY SSF81653 122 232 1.83E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 SUPERFAMILY SSF56784 330 720 1.65E-60 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 SMART SM00831 11 85 1.6E-27 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 648 673 2.5E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 588 604 2.5E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 472 490 2.5E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 616 632 2.5E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Gene3D G3DSA:1.20.1110.10 63 869 8.3E-296 T 11-10-2018 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Pfam PF00690 Cation transporter/ATPase, N-terminus 12 80 4.0E-18 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tbd_0502 eea7ebe2e322f9edf21d031ea89be670 880 Pfam PF00689 Cation transporting ATPase, C-terminus 700 870 1.0E-53 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 430 452 2.8E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 276 298 2.8E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 2.8E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 2.8E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 258 284 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 431 450 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 257 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 326 338 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 8.2E-66 T 11-10-2018 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 Pfam PF00361 Proton-conducting membrane transporter 136 431 6.0E-82 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 67 124 1.7E-27 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1153 8fb4ab5f08c27c618e68e77150940f28 669 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 8 665 2.7E-242 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SMART SM00260 538 678 3.0E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 298 361 1.2E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:3.30.565.10 362 545 1.4E-55 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 545 5.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:3.30.70.400 151 229 6.7E-9 T 11-10-2018 IPR035891 CheY-binding domain of CheA Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:2.40.50.180 569 633 6.8E-38 T 11-10-2018 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Pfam PF01627 Hpt domain 8 92 4.8E-21 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SUPERFAMILY SSF47384 299 362 1.96E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SUPERFAMILY SSF47226 4 129 5.89E-34 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SUPERFAMILY SSF55874 364 544 1.28E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Pfam PF01584 CheW-like domain 551 680 1.1E-25 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Pfam PF09078 CheY binding 165 227 4.2E-20 T 11-10-2018 IPR015162 CheY binding Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:1.10.287.560 298 361 5.9E-18 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SMART SM00387 406 546 4.0E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:1.20.120.160 1 138 8.3E-41 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SMART SM00073 5 102 1.3E-27 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SMART SM01231 298 361 2.5E-22 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SUPERFAMILY SSF55052 164 229 7.32E-17 T 11-10-2018 IPR035891 CheY-binding domain of CheA Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 SUPERFAMILY SSF50341 545 678 1.7E-31 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 Gene3D G3DSA:2.30.30.40 546 674 6.8E-38 T 11-10-2018 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 543 3.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 3.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 3.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1624 67195017d007e3ac9c687bbd3d0f7d39 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 500 3.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 PIRSF PIRSF001413 9 431 9.7E-114 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 SUPERFAMILY SSF53686 31 424 7.86E-113 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tbd_1773 49310e46239622ab4594fe009173c8aa 450 Gene3D G3DSA:3.40.50.1100 13 418 1.5E-168 T 11-10-2018 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 13 427 7.9E-189 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 21 425 38.894 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 Gene3D G3DSA:3.40.50.1100 14 237 1.5E-168 T 11-10-2018 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 104 118 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1773 49310e46239622ab4594fe009173c8aa 450 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 412 2.9E-49 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tbd_1773 49310e46239622ab4594fe009173c8aa 450 PIRSF PIRSF500824 1 434 2.4E-199 T 11-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 276 289 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 Gene3D G3DSA:3.40.50.10490 108 302 2.9E-231 T 11-10-2018 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 349 370 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 503 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 160 179 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 471 489 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 272 290 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 503 516 4.8E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 SUPERFAMILY SSF53697 20 554 1.63E-219 T 11-10-2018 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 503 520 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 Gene3D G3DSA:3.40.50.10490 25 512 2.9E-231 T 11-10-2018 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 Pfam PF00342 Phosphoglucose isomerase 62 547 3.4E-228 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 Gene3D G3DSA:1.10.1390.10 513 554 4.3E-20 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2063 1499f6b4ff63b1dc426127d5a9303a94 560 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 56 530 42.57 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Pfam PF13549 ATP-grasp domain 482 703 6.5E-83 T 11-10-2018 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.40.50.261 134 295 1.0E-59 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SUPERFAMILY SSF51735 2 143 1.15E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SUPERFAMILY SSF56059 490 703 4.62E-38 T 11-10-2018 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SUPERFAMILY SSF55729 733 880 2.13E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.40.50.720 4 133 1.7E-41 T 11-10-2018 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.40.630.30 720 888 3.0E-42 T 11-10-2018 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 292 6.3E-56 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SUPERFAMILY SSF52210 298 454 3.27E-48 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.40.50.261 297 462 1.3E-60 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.30.1490.20 508 585 7.7E-76 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Pfam PF13380 CoA binding domain 14 138 3.1E-22 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Pfam PF00583 Acetyltransferase (GNAT) family 796 874 2.1E-6 T 11-10-2018 IPR000182 GNAT domain Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SMART SM00881 9 104 6.1E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 Gene3D G3DSA:3.30.470.20 490 701 7.7E-76 T 11-10-2018 Tbd_2024 30bb93500fa9f84fe479b6e5e2267f8b 892 SUPERFAMILY SSF52210 133 295 8.5E-46 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0913 dee785e5fd662c34965c1302b8940b55 212 Pfam PF08534 Redoxin 60 207 1.1E-9 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tbd_0913 dee785e5fd662c34965c1302b8940b55 212 SUPERFAMILY SSF52833 56 207 2.72E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0913 dee785e5fd662c34965c1302b8940b55 212 Gene3D G3DSA:3.40.30.10 44 212 2.9E-16 T 11-10-2018 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 4.5E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 218 237 4.5E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 4.5E-24 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 SUPERFAMILY SSF51306 56 264 4.18E-70 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tbd_2088 205ddefd794b69adb4207344b6253eec 269 Pfam PF10502 Signal peptidase, peptidase S26 217 255 7.6E-6 T 11-10-2018 IPR019533 Peptidase S26 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 Gene3D G3DSA:2.170.230.10 133 217 1.1E-69 T 11-10-2018 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 258 1.3E-48 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 ProSitePatterns PS00761 Signal peptidases I signature 3. 223 236 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 Pfam PF00717 Peptidase S24-like 64 145 3.8E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tbd_2088 205ddefd794b69adb4207344b6253eec 269 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Tbd_2088 205ddefd794b69adb4207344b6253eec 269 Gene3D G3DSA:2.10.109.10 56 258 1.1E-69 T 11-10-2018 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 SMART SM00448 7 118 5.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 1.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 1.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 SUPERFAMILY SSF52172 5 181 3.7E-35 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Gene3D G3DSA:3.40.50.2300 1 130 3.7E-26 T 11-10-2018 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Gene3D G3DSA:1.10.8.60 308 380 2.4E-18 T 11-10-2018 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 SUPERFAMILY SSF52540 136 375 2.23E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 SUPERFAMILY SSF46689 347 439 3.94E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Pfam PF00072 Response regulator receiver domain 9 118 6.2E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Gene3D G3DSA:3.40.50.300 131 307 1.4E-62 T 11-10-2018 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 SMART SM00382 157 300 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Pfam PF00158 Sigma-54 interaction domain 137 303 6.3E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 3.1E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tbd_1807 7859291dd0b6bf54a508ecf3272f4537 440 Gene3D G3DSA:1.10.10.60 381 440 2.3E-15 T 11-10-2018 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Pfam PF01565 FAD binding domain 40 176 2.5E-35 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Gene3D G3DSA:3.30.465.10 95 215 5.6E-41 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Gene3D G3DSA:3.30.70.2740 336 417 5.1E-15 T 11-10-2018 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Gene3D G3DSA:1.10.45.10 418 457 1.7E-13 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 SUPERFAMILY SSF56176 5 216 2.15E-65 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Gene3D G3DSA:3.30.43.10 1 91 5.3E-24 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 SUPERFAMILY SSF55103 218 460 1.52E-61 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tbd_1998 0c19b437728c2fa942396da2b3b3febd 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 3.0E-61 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Gene3D G3DSA:3.30.420.110 129 258 1.7E-28 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Gene3D G3DSA:3.40.50.300 565 808 3.1E-98 T 11-10-2018 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Gene3D G3DSA:1.10.1420.10 262 555 1.7E-93 T 11-10-2018 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SUPERFAMILY SSF48334 263 559 2.49E-80 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SUPERFAMILY SSF52540 563 792 4.41E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 PIRSF PIRSF037677 212 797 3.2E-122 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 PIRSF PIRSF037677 4 185 1.0E-25 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Pfam PF05188 MutS domain II 130 248 1.1E-20 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Pfam PF05192 MutS domain III 265 554 2.4E-33 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SUPERFAMILY SSF55271 5 116 2.22E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Pfam PF05190 MutS family domain IV 423 514 1.3E-28 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Gene3D G3DSA:1.10.1420.10 395 530 1.7E-93 T 11-10-2018 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SMART SM00534 601 788 2.0E-111 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Pfam PF01624 MutS domain I 9 119 1.5E-41 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SUPERFAMILY SSF53150 118 276 1.44E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 843 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Pfam PF00488 MutS domain V 605 791 4.5E-84 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Gene3D G3DSA:3.40.1170.10 3 122 6.1E-49 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 SMART SM00533 279 586 7.1E-86 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 8 838 24.346 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tbd_1159 397071a3d8d07eef8cdbebab74424071 850 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 682 698 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 Pfam PF00271 Helicase conserved C-terminal domain 519 580 5.9E-6 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 SMART SM00487 188 385 8.6E-12 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 SMART SM00490 485 581 7.7E-6 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 SUPERFAMILY SSF52540 212 591 4.04E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 TIGRFAM TIGR00595 priA: primosomal protein N' 214 717 5.4E-170 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 Gene3D G3DSA:1.10.8.630 3 113 7.9E-29 T 11-10-2018 Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 719 23.835 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 Pfam PF00270 DEAD/DEAH box helicase 195 355 1.1E-10 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_2781 e7d72c1f372276ef8baca7a6304f1f4d 719 Gene3D G3DSA:3.40.50.300 186 371 4.3E-66 T 11-10-2018 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 SUPERFAMILY SSF55234 80 146 2.22E-30 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PRINTS PR01693 Cyanase signature 132 142 6.4E-29 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PRINTS PR01693 Cyanase signature 34 51 6.4E-29 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PRINTS PR01693 Cyanase signature 14 29 6.4E-29 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PRINTS PR01693 Cyanase signature 83 97 6.4E-29 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PRINTS PR01693 Cyanase signature 101 117 6.4E-29 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 Pfam PF02560 Cyanate lyase C-terminal domain 79 145 5.7E-36 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 Gene3D G3DSA:1.10.260.40 1 80 1.4E-28 T 11-10-2018 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 TIGRFAM TIGR00673 cynS: cyanase 5 147 5.8E-53 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 80.664 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 SUPERFAMILY SSF47413 1 77 8.44E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 PIRSF PIRSF001263 1 147 1.2E-52 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 Gene3D G3DSA:3.30.1160.10 81 147 7.4E-34 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 Tbd_1941 7b6ffd58b9ad1a0ec34c45f7a89945b9 147 SMART SM01116 75 147 1.3E-49 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Gene3D G3DSA:1.10.1160.10 269 347 2.9E-31 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 48 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 560 52.519 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 31 345 4.7E-106 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 31 562 2.2E-223 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 SUPERFAMILY SSF52374 31 353 1.1E-96 T 11-10-2018 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Gene3D G3DSA:2.40.240.10 356 475 3.4E-80 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 348 539 8.8E-57 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Gene3D G3DSA:3.90.800.10 104 212 5.6E-105 T 11-10-2018 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Gene3D G3DSA:3.40.50.620 32 251 5.6E-105 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 Gene3D G3DSA:2.40.240.10 348 557 3.4E-80 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 SUPERFAMILY SSF50715 348 559 1.1E-73 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 46 2.1E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 59 2.1E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 213 223 2.1E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_0850 725eb571d8f52cb288eb6f64ae2283f9 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 63 76 2.1E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 PIRSF PIRSF003095 1 432 8.2E-116 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 413 2.2E-31 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 SUPERFAMILY SSF54534 102 242 7.27E-30 T 11-10-2018 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Gene3D G3DSA:3.10.50.40 151 247 8.6E-92 T 11-10-2018 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 8.1E-31 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Gene3D G3DSA:1.10.3120.10 117 418 8.6E-92 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Hamap MF_00303 Trigger factor [tig]. 1 419 19.777 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 238 7.4E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 SUPERFAMILY SSF102735 1 129 7.32E-30 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 TIGRFAM TIGR00115 tig: trigger factor 12 412 4.4E-130 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 SUPERFAMILY SSF109998 249 430 6.8E-45 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tbd_1678 669fb2344c49789b110be448a9d6c17f 432 Gene3D G3DSA:3.30.70.1050 1 116 2.3E-31 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 SUPERFAMILY SSF160246 15 155 4.05E-40 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 393 407 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 Gene3D G3DSA:3.40.50.300 299 577 2.5E-104 T 11-10-2018 Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 Gene3D G3DSA:3.30.450.90 165 298 6.2E-45 T 11-10-2018 Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 SMART SM00382 326 473 6.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 SUPERFAMILY SSF52540 188 570 1.13E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 Gene3D G3DSA:3.30.300.160 74 155 2.0E-8 T 11-10-2018 Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 Pfam PF00437 Type II/IV secretion system protein 203 465 1.9E-80 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0752 e7487f588d18e7ee38fb473f2aec779c 577 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 54 157 1.7E-24 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 Gene3D G3DSA:1.25.40.10 530 595 3.8E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 784 827 1.2E-20 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 207 278 7.3E-26 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 SUPERFAMILY SSF48452 534 813 5.55E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 Gene3D G3DSA:3.10.350.10 187 261 2.4E-5 T 11-10-2018 IPR036779 LysM domain superfamily Tbd_1918 23d805060c6595db620c7b35bcaf7f08 828 Gene3D G3DSA:1.20.58.2200 766 827 3.1E-21 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily Tbd_2115 b6fc703deab7021af991d4ba628a49b6 173 Pfam PF13533 Biotin-lipoyl like 26 72 3.0E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Tbd_2115 b6fc703deab7021af991d4ba628a49b6 173 SUPERFAMILY SSF111369 22 164 3.53E-20 T 11-10-2018 Tbd_2115 b6fc703deab7021af991d4ba628a49b6 173 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 163 1.1E-33 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_2115 b6fc703deab7021af991d4ba628a49b6 173 Gene3D G3DSA:2.40.50.100 25 168 3.0E-31 T 11-10-2018 Tbd_2115 b6fc703deab7021af991d4ba628a49b6 173 Gene3D G3DSA:1.10.287.470 60 133 3.0E-31 T 11-10-2018 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 Pfam PF02441 Flavoprotein 6 173 1.3E-40 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 184 360 2.2E-62 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 Gene3D G3DSA:3.40.50.10300 182 391 9.2E-68 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 SUPERFAMILY SSF52507 4 176 1.01E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 Gene3D G3DSA:3.40.50.1950 1 181 2.3E-56 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 386 1.0E-124 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Tbd_2587 1cc2719fa9dc7f248b5fc0733277ef63 391 SUPERFAMILY SSF102645 178 390 4.32E-68 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 1.5E-26 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 1.5E-31 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.8E-50 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 SUPERFAMILY SSF117143 94 222 1.03E-35 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 4.5E-121 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Tbd_1632 23a99e52ae6d99676cf1838452ee7c91 260 Pfam PF00460 Flagella basal body rod protein 5 35 7.1E-14 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_0097 3e88edb085554c7bd4f9a282e1a08fe4 295 SUPERFAMILY SSF50494 49 277 1.6E-30 T 11-10-2018 IPR009003 Peptidase S1, PA clan Tbd_0097 3e88edb085554c7bd4f9a282e1a08fe4 295 Gene3D G3DSA:2.40.10.10 152 281 3.0E-16 T 11-10-2018 Tbd_0097 3e88edb085554c7bd4f9a282e1a08fe4 295 Pfam PF13365 Trypsin-like peptidase domain 81 243 6.0E-20 T 11-10-2018 Tbd_0097 3e88edb085554c7bd4f9a282e1a08fe4 295 Gene3D G3DSA:2.40.10.10 44 151 1.5E-12 T 11-10-2018 Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 Pfam PF00696 Amino acid kinase family 6 214 1.5E-29 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 Gene3D G3DSA:3.40.1160.10 1 237 2.6E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 41.931 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 SUPERFAMILY SSF53633 4 235 2.88E-70 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 PIRSF PIRSF005650 2 237 1.9E-84 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Tbd_0787 62033730bc510f6e5cc89b9b6d488fa7 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 234 1.8E-91 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tbd_0586 e6d641e94ad3e08c0fabe9486e0c63fa 154 Gene3D G3DSA:3.40.30.10 2 152 2.2E-44 T 11-10-2018 Tbd_0586 e6d641e94ad3e08c0fabe9486e0c63fa 154 PIRSF PIRSF000239 1 154 9.1E-28 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0586 e6d641e94ad3e08c0fabe9486e0c63fa 154 SUPERFAMILY SSF52833 1 153 9.18E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0586 e6d641e94ad3e08c0fabe9486e0c63fa 154 Pfam PF00578 AhpC/TSA family 5 132 9.2E-36 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0377 5e5d520b2957c054c642b63c33853940 453 Pfam PF00675 Insulinase (Peptidase family M16) 31 177 3.9E-25 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Tbd_0377 5e5d520b2957c054c642b63c33853940 453 Gene3D G3DSA:3.30.830.10 16 239 1.1E-82 T 11-10-2018 Tbd_0377 5e5d520b2957c054c642b63c33853940 453 SUPERFAMILY SSF63411 242 432 3.5E-37 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tbd_0377 5e5d520b2957c054c642b63c33853940 453 Pfam PF05193 Peptidase M16 inactive domain 186 367 7.0E-34 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Tbd_0377 5e5d520b2957c054c642b63c33853940 453 SUPERFAMILY SSF63411 22 234 6.6E-61 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tbd_0377 5e5d520b2957c054c642b63c33853940 453 Gene3D G3DSA:3.30.830.10 240 436 4.6E-56 T 11-10-2018 Tbd_0377 5e5d520b2957c054c642b63c33853940 453 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 52 75 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Tbd_1170 6f2dd34c3f65f456fff966437f56ffc2 64 SUPERFAMILY SSF140319 1 62 7.72E-29 T 11-10-2018 IPR036762 IscX-like superfamily Tbd_1170 6f2dd34c3f65f456fff966437f56ffc2 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 1.5E-36 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Tbd_1170 6f2dd34c3f65f456fff966437f56ffc2 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.0E-35 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Tbd_1170 6f2dd34c3f65f456fff966437f56ffc2 64 Gene3D G3DSA:1.10.10.600 1 64 2.2E-31 T 11-10-2018 IPR036762 IscX-like superfamily Tbd_1170 6f2dd34c3f65f456fff966437f56ffc2 64 PIRSF PIRSF039003 1 64 1.2E-36 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 SUPERFAMILY SSF53098 1 175 4.8E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 Gene3D G3DSA:3.30.420.10 1 179 8.1E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 SMART SM00479 2 174 3.0E-52 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 Pfam PF00929 Exonuclease 4 165 4.8E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 176 7.5E-60 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1662 d1cb904e06b044fa35f5fada40f34cc3 232 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 227 3.6E-88 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Gene3D G3DSA:1.20.1270.10 524 602 1.6E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Gene3D G3DSA:3.90.640.10 229 316 2.5E-166 T 11-10-2018 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 SUPERFAMILY SSF53067 4 184 9.2E-66 T 11-10-2018 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 1.9E-294 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Gene3D G3DSA:3.30.420.40 180 366 2.5E-166 T 11-10-2018 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 SUPERFAMILY SSF100934 507 606 3.34E-19 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 SUPERFAMILY SSF53067 187 382 4.32E-67 T 11-10-2018 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Pfam PF00012 Hsp70 protein 4 604 1.1E-265 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Gene3D G3DSA:3.30.420.40 5 379 2.5E-166 T 11-10-2018 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.1E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Gene3D G3DSA:2.60.34.10 383 523 2.2E-67 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 SUPERFAMILY SSF100920 384 540 4.58E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tbd_1538 a2d5eae5a38da75b102bfb6606b43903 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 37.183 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tbd_1312 51f5d1f6e1ea9308c64e3ceb2c9be6f4 737 Gene3D G3DSA:3.90.550.10 142 377 1.5E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1312 51f5d1f6e1ea9308c64e3ceb2c9be6f4 737 SUPERFAMILY SSF53448 148 440 9.34E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1312 51f5d1f6e1ea9308c64e3ceb2c9be6f4 737 Pfam PF00535 Glycosyl transferase family 2 152 333 1.5E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0555 fa081638ff3bc6c3a3becca637f12b78 614 SUPERFAMILY SSF53300 424 608 1.03E-21 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0555 fa081638ff3bc6c3a3becca637f12b78 614 SMART SM00327 421 611 3.5E-19 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_0555 fa081638ff3bc6c3a3becca637f12b78 614 Gene3D G3DSA:3.40.50.410 413 598 7.7E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0555 fa081638ff3bc6c3a3becca637f12b78 614 Pfam PF00092 von Willebrand factor type A domain 461 579 1.9E-6 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_1390 669033d9669e6c3c63c3a24d95ae1612 884 SUPERFAMILY SSF54862 523 696 7.73E-8 T 11-10-2018 Tbd_1390 669033d9669e6c3c63c3a24d95ae1612 884 SMART SM00900 117 211 4.3E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_1390 669033d9669e6c3c63c3a24d95ae1612 884 Pfam PF04205 FMN-binding domain 121 204 1.8E-6 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_1390 669033d9669e6c3c63c3a24d95ae1612 884 Pfam PF12801 4Fe-4S binding domain 511 557 1.1E-14 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1390 669033d9669e6c3c63c3a24d95ae1612 884 Pfam PF12801 4Fe-4S binding domain 616 647 1.7E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 Gene3D G3DSA:3.40.50.300 1 214 1.1E-78 T 11-10-2018 Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 Pfam PF00270 DEAD/DEAH box helicase 26 200 2.5E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 SUPERFAMILY SSF52540 79 363 9.85E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 Gene3D G3DSA:3.40.50.300 217 379 1.7E-51 T 11-10-2018 Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 Pfam PF00271 Helicase conserved C-terminal domain 236 342 5.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 SMART SM00490 261 342 2.4E-34 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 SMART SM00487 21 225 3.6E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_1101 9a1eac86b1aacd6475605a7e8d1133ff 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 22 35 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 225 241 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 137 151 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 75 91 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 320 336 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 268 283 5.3E-20 T 11-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 Tbd_2258 12329d9278055295259523b6f28b6318 388 Gene3D G3DSA:3.30.360.10 155 348 8.7E-103 T 11-10-2018 Tbd_2258 12329d9278055295259523b6f28b6318 388 SUPERFAMILY SSF55347 157 319 3.27E-39 T 11-10-2018 Tbd_2258 12329d9278055295259523b6f28b6318 388 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 24 147 6.1E-29 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Tbd_2258 12329d9278055295259523b6f28b6318 388 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 160 261 1.9E-6 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Tbd_2258 12329d9278055295259523b6f28b6318 388 Gene3D G3DSA:3.40.50.720 28 330 8.7E-103 T 11-10-2018 Tbd_2258 12329d9278055295259523b6f28b6318 388 SUPERFAMILY SSF51735 17 178 2.88E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2609 5e167affdc08f88bc82ef7e8929de989 603 SUPERFAMILY SSF52091 454 563 3.34E-15 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2609 5e167affdc08f88bc82ef7e8929de989 603 Pfam PF01740 STAS domain 453 558 2.0E-9 T 11-10-2018 IPR002645 STAS domain Tbd_2609 5e167affdc08f88bc82ef7e8929de989 603 Pfam PF00916 Sulfate permease family 33 400 4.0E-93 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Tbd_2609 5e167affdc08f88bc82ef7e8929de989 603 Gene3D G3DSA:3.30.750.24 445 563 2.4E-22 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2609 5e167affdc08f88bc82ef7e8929de989 603 TIGRFAM TIGR00815 sulP: sulfate permease 22 558 6.1E-119 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Tbd_1550 a10d84e265e345c0c37995145eb63634 310 SUPERFAMILY SSF52151 7 308 7.32E-75 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tbd_1550 a10d84e265e345c0c37995145eb63634 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 292 1.7E-107 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tbd_1550 a10d84e265e345c0c37995145eb63634 310 SUPERFAMILY SSF55048 132 199 1.02E-17 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Tbd_1550 a10d84e265e345c0c37995145eb63634 310 Gene3D G3DSA:3.30.70.250 127 199 5.5E-96 T 11-10-2018 Tbd_1550 a10d84e265e345c0c37995145eb63634 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 10 309 2.9E-24 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Tbd_1550 a10d84e265e345c0c37995145eb63634 310 PIRSF PIRSF000446 4 310 7.3E-111 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tbd_1550 a10d84e265e345c0c37995145eb63634 310 Gene3D G3DSA:3.40.366.10 9 286 5.5E-96 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Tbd_1550 a10d84e265e345c0c37995145eb63634 310 Pfam PF00698 Acyl transferase domain 9 280 1.3E-37 T 11-10-2018 IPR014043 Acyl transferase Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 Pfam PF01471 Putative peptidoglycan binding domain 354 405 2.6E-13 T 11-10-2018 IPR002477 Peptidoglycan binding-like Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 SUPERFAMILY SSF47090 354 407 3.92E-15 T 11-10-2018 IPR036365 PGBD-like superfamily Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 Pfam PF13406 Transglycosylase SLT domain 41 332 6.9E-109 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 Gene3D G3DSA:1.10.101.10 351 417 3.5E-12 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 40 335 3.6E-107 T 11-10-2018 IPR011970 Lytic murein transglycosylase Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 SUPERFAMILY SSF53955 25 337 1.04E-102 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 Gene3D G3DSA:1.10.8.350 52 216 2.1E-87 T 11-10-2018 Tbd_0061 b856cab9671a8f000fd7d8391b019edf 434 Gene3D G3DSA:1.10.530.10 83 331 2.1E-87 T 11-10-2018 Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 SMART SM00646 245 400 1.5E-60 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 SUPERFAMILY SSF53187 183 403 1.0E-52 T 11-10-2018 Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 185 400 1.9E-48 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 Gene3D G3DSA:3.40.630.40 170 409 1.5E-77 T 11-10-2018 Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 Pfam PF11741 AMIN domain 43 145 9.5E-21 T 11-10-2018 IPR021731 AMIN domain Tbd_1519 78edc9a206f60118a1bcbeb09255e8b3 418 Gene3D G3DSA:2.60.40.3500 32 148 8.4E-29 T 11-10-2018 Tbd_0569 7651cce1eb54a51b6ad3a6e22f453aa1 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.072 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_0569 7651cce1eb54a51b6ad3a6e22f453aa1 159 Pfam PF01967 MoaC family 15 150 6.2E-53 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_0569 7651cce1eb54a51b6ad3a6e22f453aa1 159 Gene3D G3DSA:3.30.70.640 1 158 4.6E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_0569 7651cce1eb54a51b6ad3a6e22f453aa1 159 SUPERFAMILY SSF55040 11 155 9.68E-59 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_0569 7651cce1eb54a51b6ad3a6e22f453aa1 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 9.4E-60 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 83 3.6E-15 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 Gene3D G3DSA:3.40.1280.10 84 248 2.0E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 SUPERFAMILY SSF75217 74 250 1.7E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 7 248 41.023 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 SMART SM00967 9 86 4.6E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 Pfam PF00588 SpoU rRNA Methylase family 101 241 2.8E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 8 247 1.4E-67 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 SUPERFAMILY SSF55315 4 82 9.18E-18 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Tbd_0609 a82ebd3359fc750fd8b0c16aa18f1665 254 Gene3D G3DSA:3.30.1330.30 1 82 6.8E-20 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 1.5E-151 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 Gene3D G3DSA:3.60.20.10 2 186 9.6E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 Pfam PF13537 Glutamine amidotransferase domain 48 167 6.1E-50 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 SUPERFAMILY SSF56235 1 223 6.35E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 SUPERFAMILY SSF52402 232 621 3.2E-89 T 11-10-2018 Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 0.0 T 11-10-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 Pfam PF00733 Asparagine synthase 244 625 8.4E-96 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Tbd_0292 bca63e2a6905c5499ff4fae94ef07e9f 639 PIRSF PIRSF001589 1 637 5.3E-181 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 Gene3D G3DSA:3.40.50.1100 106 447 2.7E-134 T 11-10-2018 Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 SUPERFAMILY SSF53686 1 478 8.4E-152 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 TIGRFAM TIGR00260 thrC: threonine synthase 103 438 3.7E-72 T 11-10-2018 IPR004450 Threonine synthase-like Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 Gene3D G3DSA:3.90.1380.10 1 94 4.9E-30 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 Gene3D G3DSA:3.40.50.1100 116 460 2.7E-134 T 11-10-2018 Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 110 339 3.3E-9 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tbd_0844 39f509b79ae819e00dc7764825f708d9 480 Pfam PF14821 Threonine synthase N terminus 2 79 2.0E-27 T 11-10-2018 IPR029144 Threonine synthase, N-terminal Tbd_2410 f31d69df71dca7b6c08366d387a85d71 158 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 35 120 3.7E-18 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Tbd_2410 f31d69df71dca7b6c08366d387a85d71 158 SUPERFAMILY SSF51316 13 148 5.13E-35 T 11-10-2018 IPR011057 Mss4-like superfamily Tbd_2410 f31d69df71dca7b6c08366d387a85d71 158 Gene3D G3DSA:2.170.150.70 14 123 3.3E-16 T 11-10-2018 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 Gene3D G3DSA:1.25.40.10 20 115 6.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 SMART SM00965 205 256 0.0012 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 412 1.4E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 560 1.4E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 329 339 1.4E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 423 433 1.4E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR00811 Bacterial general secretion pathway protein D signature 523 541 1.4E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR01032 Gene IV protein signature 539 561 1.1E-11 T 11-10-2018 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR01032 Gene IV protein signature 413 436 1.1E-11 T 11-10-2018 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 PRINTS PR01032 Gene IV protein signature 486 514 1.1E-11 T 11-10-2018 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 SUPERFAMILY SSF48452 23 158 1.82E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 Gene3D G3DSA:3.55.50.30 161 278 1.9E-12 T 11-10-2018 Tbd_1300 9cf49180c6121a1ed3b6baae91aa919c 667 Pfam PF00263 Bacterial type II and III secretion system protein 394 559 9.9E-43 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tbd_1606 8d66677fb075e106f7350e66c35b520b 158 Pfam PF03748 Flagellar basal body-associated protein FliL 60 158 3.0E-27 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 Pfam PF00924 Mechanosensitive ion channel 142 345 1.0E-51 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 Gene3D G3DSA:2.30.30.60 200 251 1.0E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 Gene3D G3DSA:3.30.70.100 252 349 2.1E-15 T 11-10-2018 Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 SUPERFAMILY SSF50182 183 250 2.16E-14 T 11-10-2018 IPR010920 LSM domain superfamily Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 SUPERFAMILY SSF82861 99 182 7.32E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tbd_1462 6a7dc3ea7da92e512da71b60dabfafc1 373 SUPERFAMILY SSF82689 252 355 2.09E-18 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 Pfam PF03796 DnaB-like helicase C terminal domain 184 436 1.2E-95 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 SMART SM00382 201 396 2.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 Gene3D G3DSA:3.40.50.300 164 441 1.7E-95 T 11-10-2018 Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 437 2.1E-146 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 SUPERFAMILY SSF52540 183 429 6.53E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 Gene3D G3DSA:1.10.860.10 2 163 5.2E-47 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 TIGRFAM TIGR03600 phage_DnaB: phage replicative helicase, DnaB family 12 427 1.2E-174 T 11-10-2018 IPR019889 DNA helicase, DnaB-like, phage Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 2.6E-31 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Tbd_2068 681a569f82c518f4a561d05e87f0e6a7 466 SUPERFAMILY SSF48024 7 116 8.24E-33 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 SUPERFAMILY SSF51735 10 243 1.22E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 Gene3D G3DSA:3.40.50.720 3 247 2.6E-58 T 11-10-2018 Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 Pfam PF00106 short chain dehydrogenase 15 207 4.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1699 15049bd9f9b43d667e3f89a5d87fccf9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.6E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1613 19eb522c52e5d5ce03ee589ce649e6a4 230 PIRSF PIRSF002884 16 230 6.2E-68 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Tbd_1613 19eb522c52e5d5ce03ee589ce649e6a4 230 SUPERFAMILY SSF75708 25 229 1.31E-62 T 11-10-2018 Tbd_1613 19eb522c52e5d5ce03ee589ce649e6a4 230 Pfam PF04344 Chemotaxis phosphatase, CheZ 32 230 1.4E-71 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Tbd_1613 19eb522c52e5d5ce03ee589ce649e6a4 230 Gene3D G3DSA:1.10.287.500 51 184 2.0E-43 T 11-10-2018 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Gene3D G3DSA:1.10.287.130 339 427 1.7E-28 T 11-10-2018 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF13188 PAS domain 227 269 5.0E-9 T 11-10-2018 IPR000014 PAS domain Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SMART SM00387 476 591 3.6E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Gene3D G3DSA:1.20.120.160 738 842 1.7E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SMART SM00388 364 429 1.3E-26 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF12729 Four helix bundle sensory module for signal transduction 15 174 1.5E-12 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF00072 Response regulator receiver domain 611 722 4.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 5.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 5.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 5.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 5.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Gene3D G3DSA:3.40.50.2300 605 737 7.4E-42 T 11-10-2018 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Gene3D G3DSA:3.30.565.10 428 593 1.8E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Gene3D G3DSA:3.30.450.20 223 338 8.6E-20 T 11-10-2018 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SUPERFAMILY SSF47384 352 430 6.08E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SMART SM00448 609 723 1.3E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SUPERFAMILY SSF55785 219 342 1.9E-12 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SUPERFAMILY SSF55874 418 588 9.17E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF01627 Hpt domain 763 838 5.8E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SUPERFAMILY SSF47226 707 836 1.44E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF00512 His Kinase A (phospho-acceptor) domain 364 429 7.3E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 350 1.1E-9 T 11-10-2018 IPR000014 PAS domain Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 SUPERFAMILY SSF52172 610 728 5.27E-40 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0987 53a7e328244751fac6bc3b0cfb817901 846 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 590 4.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 SUPERFAMILY SSF55021 81 164 5.72E-26 T 11-10-2018 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 SUPERFAMILY SSF55021 4 78 5.93E-23 T 11-10-2018 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 159 2.1E-63 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 3.0E-36 T 11-10-2018 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 Gene3D G3DSA:3.30.70.1150 85 165 3.9E-29 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 Pfam PF13710 ACT domain 15 75 1.3E-15 T 11-10-2018 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 Pfam PF10369 Small subunit of acetolactate synthase 86 159 2.4E-26 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tbd_1990 75c97570bc0a1a8b1d0923ae02cc7584 165 Gene3D G3DSA:3.30.70.260 2 80 2.3E-36 T 11-10-2018 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 Pfam PF02154 Flagellar motor switch protein FliM 38 230 1.7E-74 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 319 1.5E-104 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 SUPERFAMILY SSF101801 249 323 1.96E-13 T 11-10-2018 IPR036429 SpoA-like superfamily Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 3.9E-27 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.9E-27 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.9E-27 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.9E-27 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 320 3.2E-19 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 PIRSF PIRSF002888 2 329 4.8E-97 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 SUPERFAMILY SSF103039 5 230 2.88E-26 T 11-10-2018 IPR028976 CheC-like superfamily Tbd_1607 2dc4910eb0c2d163279ef3261bf8fb39 334 Gene3D G3DSA:3.40.1550.10 44 232 1.6E-59 T 11-10-2018 IPR028976 CheC-like superfamily Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 SMART SM00388 232 297 9.2E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 432 2.4E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 Gene3D G3DSA:3.30.565.10 303 452 1.1E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 SUPERFAMILY SSF47384 215 295 1.0E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 295 8.6E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 SUPERFAMILY SSF55874 286 434 1.44E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 SMART SM00387 342 455 1.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 Pfam PF08521 Two-component sensor kinase N-terminal 22 154 2.8E-11 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal Tbd_0135 c495dd416f3c620ad523e76c008d8cc8 455 Gene3D G3DSA:1.10.287.130 181 297 2.9E-23 T 11-10-2018 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 SUPERFAMILY SSF46626 169 277 3.49E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 SUPERFAMILY SSF46626 38 137 1.17E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 Gene3D G3DSA:1.10.760.10 165 276 6.4E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 Pfam PF00034 Cytochrome c 171 277 7.3E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 Pfam PF00034 Cytochrome c 47 124 3.0E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0822 74958ee18cbac1c49c9daf5aaf78fcd8 277 Gene3D G3DSA:1.10.760.10 1 138 2.0E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 Gene3D G3DSA:3.40.50.880 2 188 6.3E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 Pfam PF00117 Glutamine amidotransferase class-I 4 185 3.4E-57 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.0E-85 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 SUPERFAMILY SSF52317 1 186 4.38E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.4E-6 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.4E-6 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.5E-14 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 8.5E-14 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.5E-14 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.8E-37 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.8E-37 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.8E-37 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.8E-37 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.8E-37 T 11-10-2018 Tbd_2224 ab470b2af9f78cf23589ae98c687e477 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.8E-37 T 11-10-2018 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 146 371 2.3E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 141 371 1.3E-117 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 Gene3D G3DSA:2.40.50.100 2 101 1.1E-19 T 11-10-2018 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 Pfam PF00364 Biotin-requiring enzyme 4 76 8.0E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 SUPERFAMILY SSF51230 1 96 9.18E-23 T 11-10-2018 IPR011053 Single hybrid motif Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 Gene3D G3DSA:3.30.559.10 146 375 4.9E-88 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Tbd_1189 b82a403aa0a2e0bba06708bf3fc259a9 379 SUPERFAMILY SSF52777 146 372 1.11E-82 T 11-10-2018 Tbd_2048 5d92a3d4d62d73cfadaec429ee9a3e88 246 SUPERFAMILY SSF81345 1 245 1.44E-53 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Tbd_2048 5d92a3d4d62d73cfadaec429ee9a3e88 246 Gene3D G3DSA:1.10.3470.10 1 246 2.8E-66 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Tbd_2048 5d92a3d4d62d73cfadaec429ee9a3e88 246 Pfam PF01032 FecCD transport family 1 245 1.2E-58 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 Gene3D G3DSA:1.10.760.10 136 221 5.9E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 PIRSF PIRSF000005 8 222 8.8E-39 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 SUPERFAMILY SSF46626 137 221 1.05E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 SUPERFAMILY SSF46626 52 132 1.08E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 Gene3D G3DSA:1.10.760.10 58 133 1.4E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 Pfam PF00034 Cytochrome c 64 129 4.4E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0064 938df0bf9288b9e29ed3a8f434c15c75 222 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 144 219 6.7E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2083 8d5a2126165142efe6ca788ce5b8bbb5 246 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 241 1.1E-99 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Tbd_2083 8d5a2126165142efe6ca788ce5b8bbb5 246 Gene3D G3DSA:3.20.20.70 2 246 1.1E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2083 8d5a2126165142efe6ca788ce5b8bbb5 246 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 1.5E-103 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Tbd_2083 8d5a2126165142efe6ca788ce5b8bbb5 246 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 246 129.93 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Tbd_2083 8d5a2126165142efe6ca788ce5b8bbb5 246 SUPERFAMILY SSF63892 6 242 7.32E-100 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 241 272 3.9E-7 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 SUPERFAMILY SSF52343 103 272 4.58E-28 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 Pfam PF00175 Oxidoreductase NAD-binding domain 120 222 2.3E-12 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 Gene3D G3DSA:3.40.50.80 110 238 4.1E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 PIRSF PIRSF006816 10 277 3.8E-57 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 Gene3D G3DSA:2.40.30.10 11 106 4.9E-14 T 11-10-2018 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 PRINTS PR00406 Cytochrome B5 reductase signature 119 138 1.2E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 PRINTS PR00406 Cytochrome B5 reductase signature 209 217 1.2E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 PRINTS PR00406 Cytochrome B5 reductase signature 95 109 1.2E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 PRINTS PR00406 Cytochrome B5 reductase signature 157 168 1.2E-8 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1261 6137362bb8e922b667a69cbb545741b8 282 SUPERFAMILY SSF63380 13 108 5.2E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_0653 6379747bd722867e27059ff7904e2112 128 Pfam PF05635 23S rRNA-intervening sequence protein 5 110 4.6E-37 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein Tbd_0653 6379747bd722867e27059ff7904e2112 128 Gene3D G3DSA:1.20.1440.60 1 120 6.2E-42 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Tbd_0653 6379747bd722867e27059ff7904e2112 128 SUPERFAMILY SSF158446 3 115 9.55E-37 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Tbd_0653 6379747bd722867e27059ff7904e2112 128 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 9 115 1.6E-36 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein Tbd_2774 21251e636b07830348cb7e78c075a9a5 128 SUPERFAMILY SSF47473 32 78 1.6E-7 T 11-10-2018 IPR011992 EF-hand domain pair Tbd_2774 21251e636b07830348cb7e78c075a9a5 128 ProSitePatterns PS00018 EF-hand calcium-binding domain. 37 49 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Tbd_2774 21251e636b07830348cb7e78c075a9a5 128 Pfam PF13202 EF hand 32 50 4.3E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Tbd_2774 21251e636b07830348cb7e78c075a9a5 128 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Tbd_2774 21251e636b07830348cb7e78c075a9a5 128 Gene3D G3DSA:1.10.238.10 25 81 3.1E-10 T 11-10-2018 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 Pfam PF06463 Molybdenum Cofactor Synthesis C 187 311 1.3E-30 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 6 327 37.898 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 327 7.7E-110 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 SUPERFAMILY SSF102114 6 301 6.15E-74 T 11-10-2018 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 Pfam PF04055 Radical SAM superfamily 20 180 1.1E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 SMART SM00729 15 217 4.6E-8 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 Pfam PF13353 4Fe-4S single cluster domain 22 111 9.1E-7 T 11-10-2018 Tbd_1023 1a8ecc6935c59b217fe4642ea5088f5b 327 Gene3D G3DSA:3.20.20.70 3 327 3.1E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 Gene3D G3DSA:3.30.460.80 2 140 8.1E-44 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 SUPERFAMILY SSF143243 8 183 4.58E-58 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 95 148 4.0E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 34 159 3.2E-41 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 161 2.0E-45 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 35.126 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1144 abe93842fa034abb4bb953fe0376432f 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 277 288 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 Gene3D G3DSA:2.60.40.10 366 483 3.5E-28 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 46 482 6.2E-158 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 Pfam PF12801 4Fe-4S binding domain 102 141 2.0E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 SUPERFAMILY SSF54862 110 374 5.78E-33 T 11-10-2018 Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 365 481 3.1E-26 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Tbd_0639 2ea237dfb722365e9d946981a6499e2e 483 Pfam PF13746 4Fe-4S dicluster domain 224 329 3.3E-42 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2469 bf7da697843c508608b27d668fd5c1eb 569 Pfam PF02254 TrkA-N domain 427 539 6.4E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tbd_2469 bf7da697843c508608b27d668fd5c1eb 569 SUPERFAMILY SSF51735 423 556 2.08E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2469 bf7da697843c508608b27d668fd5c1eb 569 Gene3D G3DSA:3.40.50.720 419 561 5.5E-31 T 11-10-2018 Tbd_2469 bf7da697843c508608b27d668fd5c1eb 569 Pfam PF00999 Sodium/hydrogen exchanger family 14 384 5.9E-71 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Tbd_2469 bf7da697843c508608b27d668fd5c1eb 569 Gene3D G3DSA:1.20.1530.20 3 398 3.2E-77 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_2724 d503b4aadb5ca0177fb8a45d20f1cd27 199 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 185 1.6E-45 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Tbd_2724 d503b4aadb5ca0177fb8a45d20f1cd27 199 Gene3D G3DSA:3.40.50.10420 1 198 1.5E-54 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Tbd_2724 d503b4aadb5ca0177fb8a45d20f1cd27 199 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 185 7.2E-42 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Tbd_2724 d503b4aadb5ca0177fb8a45d20f1cd27 199 PIRSF PIRSF006806 1 188 1.7E-37 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Tbd_2724 d503b4aadb5ca0177fb8a45d20f1cd27 199 SUPERFAMILY SSF100950 1 195 2.37E-54 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Gene3D G3DSA:1.10.357.20 319 493 1.6E-50 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SUPERFAMILY SSF158791 57 178 3.4E-27 T 11-10-2018 Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SUPERFAMILY SSF161093 322 493 5.62E-50 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Pfam PF01769 Divalent cation transporter 365 486 4.5E-27 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SMART SM00924 78 181 8.2E-35 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Pfam PF00571 CBS domain 245 299 3.8E-4 T 11-10-2018 IPR000644 CBS domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Pfam PF00571 CBS domain 181 238 9.1E-6 T 11-10-2018 IPR000644 CBS domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Pfam PF03448 MgtE intracellular N domain 78 179 2.8E-24 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SMART SM00116 188 241 0.51 T 11-10-2018 IPR000644 CBS domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SMART SM00116 252 300 0.027 T 11-10-2018 IPR000644 CBS domain Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Gene3D G3DSA:3.10.580.10 177 304 4.5E-42 T 11-10-2018 Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 Gene3D G3DSA:1.25.60.10 55 176 3.5E-16 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 SUPERFAMILY SSF54631 180 319 6.82E-29 T 11-10-2018 Tbd_2506 b7a806009fdc02629f1e10acf1176cc6 494 TIGRFAM TIGR00400 mgtE: magnesium transporter 59 493 1.3E-89 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 Gene3D G3DSA:1.10.8.10 11 102 5.4E-7 T 11-10-2018 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 Pfam PF05175 Methyltransferase small domain 131 215 1.4E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 PIRSF PIRSF037167 1 304 1.9E-131 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 Gene3D G3DSA:3.40.50.150 103 299 7.1E-44 T 11-10-2018 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 SUPERFAMILY SSF53335 13 285 1.69E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 3 299 52.113 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 297 4.3E-68 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_1270 014828ce5a6514e70b697d65b33a845a 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 10 293 6.2E-130 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 Pfam PF01168 Alanine racemase, N-terminal domain 29 227 3.5E-32 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 227 3.0E-69 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 PIRSF PIRSF004848 1 232 7.7E-69 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 SUPERFAMILY SSF51419 3 225 2.09E-77 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 Gene3D G3DSA:3.20.20.10 1 234 2.8E-82 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0668 3d6cfb176fb5925635ff3858afe78022 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 226 30.666 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 SMART SM00267 215 386 2.4E-55 T 11-10-2018 IPR000160 GGDEF domain Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 Pfam PF00072 Response regulator receiver domain 101 211 1.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 Gene3D G3DSA:3.40.50.2300 86 224 8.0E-31 T 11-10-2018 Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 382 7.0E-45 T 11-10-2018 IPR000160 GGDEF domain Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 SUPERFAMILY SSF55073 231 385 2.2E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 384 6.9E-48 T 11-10-2018 IPR000160 GGDEF domain Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 SMART SM00448 99 211 4.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 SUPERFAMILY SSF52172 99 227 3.42E-32 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1039 e04828b69aafabd98ec712400e0a3af0 393 Gene3D G3DSA:3.30.70.270 225 388 2.0E-53 T 11-10-2018 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 PIRSF PIRSF000485 1 482 9.4E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 Gene3D G3DSA:3.40.50.2020 277 446 1.6E-145 T 11-10-2018 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 SUPERFAMILY SSF53271 252 484 3.15E-70 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 Gene3D G3DSA:3.60.20.10 2 467 1.6E-145 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.506 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 3.7E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 Pfam PF00156 Phosphoribosyl transferase domain 283 394 3.7E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 SUPERFAMILY SSF56235 2 259 1.46E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1908 cda89a4bb076a5c45e0cd399cad52ee3 506 Pfam PF13522 Glutamine amidotransferase domain 66 202 2.5E-15 T 11-10-2018 Tbd_2101 c19449394d8795262191d3c772fdf54b 463 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 9.7E-34 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Tbd_2101 c19449394d8795262191d3c772fdf54b 463 Gene3D G3DSA:3.40.50.300 179 460 2.3E-107 T 11-10-2018 Tbd_2101 c19449394d8795262191d3c772fdf54b 463 Gene3D G3DSA:1.10.860.10 13 178 4.9E-54 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Tbd_2101 c19449394d8795262191d3c772fdf54b 463 SUPERFAMILY SSF48024 18 129 2.09E-35 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Tbd_2101 c19449394d8795262191d3c772fdf54b 463 SMART SM00382 218 416 1.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2101 c19449394d8795262191d3c772fdf54b 463 SUPERFAMILY SSF52540 199 449 1.2E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2101 c19449394d8795262191d3c772fdf54b 463 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 458 2.3E-177 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Tbd_2101 c19449394d8795262191d3c772fdf54b 463 Pfam PF03796 DnaB-like helicase C terminal domain 201 455 5.2E-115 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.4E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.4E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.4E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.4E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 Pfam PF09190 DALR domain 341 395 3.6E-17 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 454 39.337 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 SUPERFAMILY SSF47323 316 453 9.15E-39 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 Gene3D G3DSA:3.40.50.620 1 305 8.2E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 SMART SM00840 341 395 4.3E-22 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 Gene3D G3DSA:1.20.120.640 306 454 8.3E-44 T 11-10-2018 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 2.8E-133 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 453 5.7E-172 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tbd_1902 3f39aedac49d991e9855a004e4e88813 454 SUPERFAMILY SSF52374 2 313 2.38E-100 T 11-10-2018 Tbd_1671 e75f31cdf532f170af815f61439d0c3c 713 Gene3D G3DSA:3.10.105.10 399 638 1.7E-51 T 11-10-2018 Tbd_1671 e75f31cdf532f170af815f61439d0c3c 713 SUPERFAMILY SSF53850 29 657 8.51E-88 T 11-10-2018 Tbd_1671 e75f31cdf532f170af815f61439d0c3c 713 PIRSF PIRSF002741 5 80 66.0 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tbd_1671 e75f31cdf532f170af815f61439d0c3c 713 PIRSF PIRSF002741 159 666 5.1E-49 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tbd_1671 e75f31cdf532f170af815f61439d0c3c 713 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 159 581 5.1E-51 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain Tbd_2544 56ec453442b80c1df86e20caddda599b 152 SUPERFAMILY SSF103247 26 148 7.32E-21 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2544 56ec453442b80c1df86e20caddda599b 152 Gene3D G3DSA:3.30.310.70 26 149 1.6E-9 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2812 9338c04e52372ba8d4f8d0c69c39a260 302 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 280 5.5E-83 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tbd_2812 9338c04e52372ba8d4f8d0c69c39a260 302 SUPERFAMILY SSF50891 174 287 4.17E-15 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_2812 9338c04e52372ba8d4f8d0c69c39a260 302 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 292 8.6E-79 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tbd_2812 9338c04e52372ba8d4f8d0c69c39a260 302 SMART SM00797 23 296 2.0E-97 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Tbd_2812 9338c04e52372ba8d4f8d0c69c39a260 302 Gene3D G3DSA:2.40.100.10 171 300 3.3E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00278 556 575 160.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00278 524 543 230.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00278 458 477 12.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00278 492 511 110.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:1.10.150.20 518 597 3.1E-29 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 606 679 4.5E-15 T 11-10-2018 IPR001357 BRCT domain Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:3.30.470.90 73 325 3.7E-89 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 326 9.9E-113 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00532 5 460 3.7E-233 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SUPERFAMILY SSF50249 326 407 6.17E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:1.10.150.20 444 517 4.4E-31 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF14520 Helix-hairpin-helix domain 458 512 5.4E-6 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:3.40.50.10190 598 680 4.0E-29 T 11-10-2018 IPR036420 BRCT domain superfamily Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:2.40.50.140 326 398 4.2E-31 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF12826 Helix-hairpin-helix motif 522 585 5.0E-24 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 PIRSF PIRSF001604 1 684 3.2E-228 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:1.10.287.610 1 72 1.8E-30 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 339 354 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SUPERFAMILY SSF56091 4 324 3.08E-108 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SUPERFAMILY SSF47781 419 595 7.78E-61 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Hamap MF_01588 DNA ligase [ligA]. 4 679 53.159 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 420 446 1.7E-11 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SUPERFAMILY SSF52113 604 683 8.22E-21 T 11-10-2018 IPR036420 BRCT domain superfamily Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Gene3D G3DSA:2.20.70.80 399 442 3.1E-12 T 11-10-2018 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 405 1.7E-32 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 SMART SM00292 605 682 1.2E-16 T 11-10-2018 IPR001357 BRCT domain Tbd_0624 e5638bd38eb07bb771e669df7005c5f6 686 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 675 9.2E-242 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF14559 Tetratricopeptide repeat 312 372 2.8E-9 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF14559 Tetratricopeptide repeat 209 275 1.1E-7 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF14559 Tetratricopeptide repeat 852 922 2.4E-7 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 775 808 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 29 62 490.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 131 164 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 809 841 63.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 470 503 0.0092 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 335 368 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 708 741 13.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 504 537 140.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 301 334 25.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 267 300 96.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 606 639 0.37 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 640 673 51.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 842 875 99.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 369 402 8.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 165 198 0.43 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 63 96 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SMART SM00028 199 232 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SUPERFAMILY SSF48452 137 404 3.5E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Gene3D G3DSA:1.25.40.10 441 609 4.0E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Gene3D G3DSA:1.25.40.10 113 258 1.9E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 4 903 0.0 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SUPERFAMILY SSF48452 468 743 5.12E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Gene3D G3DSA:1.25.40.10 610 922 6.9E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Gene3D G3DSA:1.25.40.10 259 440 8.7E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SUPERFAMILY SSF48452 36 176 4.09E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 SUPERFAMILY SSF48452 680 912 2.85E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF13432 Tetratricopeptide repeat 576 639 5.9E-5 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF13432 Tetratricopeptide repeat 137 197 8.2E-6 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF13432 Tetratricopeptide repeat 447 500 0.0031 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF13432 Tetratricopeptide repeat 645 693 0.0026 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Pfam PF13432 Tetratricopeptide repeat 375 418 0.0029 T 11-10-2018 Tbd_0196 ea5a70c72dcc7f263a7377076fba8277 927 Gene3D G3DSA:1.25.40.10 33 112 6.3E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2497 f78facb5e1f72919033065ae24740292 309 SUPERFAMILY SSF53795 115 279 3.36E-16 T 11-10-2018 Tbd_2497 f78facb5e1f72919033065ae24740292 309 Gene3D G3DSA:3.40.50.300 114 182 7.7E-6 T 11-10-2018 Tbd_2497 f78facb5e1f72919033065ae24740292 309 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 22 300 4.4E-123 T 11-10-2018 IPR027600 HprK-related kinase A Tbd_0847 46b4d5009dcd5c8e823857310cdbc10f 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 154 5.3E-65 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_0847 46b4d5009dcd5c8e823857310cdbc10f 177 SUPERFAMILY SSF55068 3 167 2.62E-76 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_0847 46b4d5009dcd5c8e823857310cdbc10f 177 Gene3D G3DSA:3.30.1060.10 1 168 2.8E-74 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_0847 46b4d5009dcd5c8e823857310cdbc10f 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 37.885 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_0847 46b4d5009dcd5c8e823857310cdbc10f 177 Pfam PF01625 Peptide methionine sulfoxide reductase 6 158 3.4E-68 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 SUPERFAMILY SSF46977 447 584 1.44E-48 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Gene3D G3DSA:4.10.80.40 544 584 2.9E-10 T 11-10-2018 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Gene3D G3DSA:1.20.58.100 429 543 4.6E-34 T 11-10-2018 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Pfam PF00890 FAD binding domain 7 402 1.5E-116 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 SUPERFAMILY SSF51905 5 433 9.39E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 SUPERFAMILY SSF56425 234 353 8.07E-40 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 584 3.1E-238 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 PIRSF PIRSF000171 1 576 5.0E-46 T 11-10-2018 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 4 584 2.6E-272 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Pfam PF02910 Fumarate reductase flavoprotein C-term 458 584 2.2E-37 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Gene3D G3DSA:3.90.700.10 244 347 2.2E-167 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1184 63e350eac01e5785ea1b5b1ecbe4bf2b 584 Gene3D G3DSA:3.50.50.60 7 413 2.2E-167 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0735 77a7b2a5b7fb489589cc58fa9a0cd39a 299 Gene3D G3DSA:2.70.98.10 1 294 1.3E-25 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Tbd_0735 77a7b2a5b7fb489589cc58fa9a0cd39a 299 SUPERFAMILY SSF74650 3 159 1.15E-12 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 Pfam PF00311 Phosphoenolpyruvate carboxylase 139 939 3.0E-272 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 SUPERFAMILY SSF51621 15 939 1.4E-292 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 939 17.072 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 588 600 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 196 212 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 764 790 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 586 606 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 143 156 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 421 441 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 628 657 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 260 275 8.1E-59 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 144 155 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Tbd_0630 cd5242fdc3b1c1c9190673b16e74d4da 939 Gene3D G3DSA:1.20.1440.90 289 424 1.6E-10 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR01032 Gene IV protein signature 598 621 4.0E-7 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR01032 Gene IV protein signature 666 694 4.0E-7 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR01032 Gene IV protein signature 557 580 4.0E-7 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Pfam PF07660 Secretin and TonB N terminus short domain 311 357 1.0E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Gene3D G3DSA:2.60.40.3500 36 140 3.5E-8 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Pfam PF11741 AMIN domain 58 139 3.2E-10 T 11-10-2018 IPR021731 AMIN domain Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 285 738 3.0E-141 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Gene3D G3DSA:2.60.40.3470 146 271 9.0E-36 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Pfam PF00263 Bacterial type II and III secretion system protein 577 738 2.2E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Gene3D G3DSA:3.55.50.30 284 355 6.9E-10 T 11-10-2018 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR00811 Bacterial general secretion pathway protein D signature 573 597 1.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR00811 Bacterial general secretion pathway protein D signature 487 497 1.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR00811 Bacterial general secretion pathway protein D signature 703 721 1.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR00811 Bacterial general secretion pathway protein D signature 726 740 1.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 PRINTS PR00811 Bacterial general secretion pathway protein D signature 608 618 1.3E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 SMART SM00965 310 358 1.8E-10 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_0206 f86eed549fded2f06c27a8309c422d83 745 Pfam PF03958 Bacterial type II/III secretion system short domain 385 487 7.0E-10 T 11-10-2018 IPR005644 NolW-like Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 Gene3D G3DSA:1.10.10.60 120 177 4.8E-24 T 11-10-2018 Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 SUPERFAMILY SSF52172 5 119 4.7E-30 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 Pfam PF00072 Response regulator receiver domain 8 116 1.8E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 SUPERFAMILY SSF46689 95 173 1.88E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 Gene3D G3DSA:3.40.50.2300 5 119 9.2E-27 T 11-10-2018 Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 SMART SM00448 5 116 1.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2690 94be9643bbeb1432bfb9aca6604f363a 179 Pfam PF02954 Bacterial regulatory protein, Fis family 134 173 3.4E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 PRINTS PR01576 Peptide deformylase signature 89 100 4.4E-39 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 PRINTS PR01576 Peptide deformylase signature 101 119 4.4E-39 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 PRINTS PR01576 Peptide deformylase signature 33 62 4.4E-39 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 PRINTS PR01576 Peptide deformylase signature 120 149 4.4E-39 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 Gene3D G3DSA:3.90.45.10 1 166 4.8E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 SUPERFAMILY SSF56420 3 164 3.79E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 PIRSF PIRSF004749 1 176 1.1E-55 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.622 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 Pfam PF01327 Polypeptide deformylase 5 152 3.9E-51 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0014 9e5f8abfd38605ec7d540498a18a811a 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 159 2.2E-56 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 Pfam PF00158 Sigma-54 interaction domain 178 344 5.3E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 Gene3D G3DSA:1.10.10.60 429 480 3.0E-13 T 11-10-2018 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 Gene3D G3DSA:3.40.50.300 169 348 2.1E-60 T 11-10-2018 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 1.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 1.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 SUPERFAMILY SSF46689 391 478 1.08E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 Gene3D G3DSA:1.10.8.60 349 427 3.6E-19 T 11-10-2018 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 SUPERFAMILY SSF52172 58 223 1.82E-7 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 Pfam PF02954 Bacterial regulatory protein, Fis family 438 476 3.9E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 SMART SM00382 198 341 2.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 SUPERFAMILY SSF52540 177 419 2.78E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0498 d3946c1d8379312efc4ca3b00929a7af 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 264 279 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Gene3D G3DSA:3.30.70.1450 366 457 1.3E-28 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 SUPERFAMILY SSF116726 361 442 1.83E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Gene3D G3DSA:3.40.50.720 2 138 1.2E-43 T 11-10-2018 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Pfam PF02080 TrkA-C domain 155 223 5.9E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Pfam PF02080 TrkA-C domain 390 450 9.6E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 SUPERFAMILY SSF51735 232 375 1.18E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Pfam PF02254 TrkA-N domain 234 349 7.8E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Pfam PF02254 TrkA-N domain 3 124 2.2E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Gene3D G3DSA:3.40.50.720 232 365 3.2E-37 T 11-10-2018 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 SUPERFAMILY SSF51735 1 150 2.13E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 SUPERFAMILY SSF116726 135 222 1.44E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 Gene3D G3DSA:3.30.70.1450 139 230 4.0E-22 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.0E-26 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.0E-26 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.0E-26 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.0E-26 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tbd_0020 23cf84d1c42e5ea4917529abfb6bc8e3 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.0E-26 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 187 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 294 42.997 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 Gene3D G3DSA:3.40.50.720 2 129 7.3E-49 T 11-10-2018 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 Pfam PF00549 CoA-ligase 157 278 6.8E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 SUPERFAMILY SSF51735 1 128 7.19E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 SUPERFAMILY SSF52210 129 291 1.83E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 291 4.9E-140 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 242 255 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 Gene3D G3DSA:3.40.50.261 130 294 2.7E-73 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 PIRSF PIRSF001553 1 297 1.7E-130 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 PRINTS PR01798 Succinyl-CoA synthase signature 214 227 5.3E-39 T 11-10-2018 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 PRINTS PR01798 Succinyl-CoA synthase signature 246 263 5.3E-39 T 11-10-2018 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 PRINTS PR01798 Succinyl-CoA synthase signature 183 201 5.3E-39 T 11-10-2018 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 5.3E-39 T 11-10-2018 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 Pfam PF02629 CoA binding domain 6 99 7.1E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_0806 63be70bd8c60b94c0c62ed6f8655260d 297 SMART SM00881 4 100 7.4E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 482 18.02 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Gene3D G3DSA:3.40.50.10260 23 223 1.2E-52 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 PIRSF PIRSF017184 22 473 2.1E-106 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Pfam PF03853 YjeF-related protein N-terminus 38 197 9.5E-41 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 SUPERFAMILY SSF64153 21 253 1.16E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 35 218 4.2E-36 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Pfam PF01256 Carbohydrate kinase 254 470 3.8E-49 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Gene3D G3DSA:3.40.1190.20 226 474 2.1E-69 T 11-10-2018 IPR029056 Ribokinase-like Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 470 1.0E-54 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 SUPERFAMILY SSF53613 235 470 1.44E-59 T 11-10-2018 IPR029056 Ribokinase-like Tbd_0626 1b685cbfbb7bf208b1be55554897ac19 482 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 18 218 22.479 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 5.5E-154 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 Gene3D G3DSA:3.90.226.10 1 318 3.6E-123 T 11-10-2018 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 8.2E-49 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 SUPERFAMILY SSF52096 5 316 5.74E-104 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.3E-68 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_0588 794da746b4b0f8537ebdc7a142d5df9f 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.617 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 SUPERFAMILY SSF54211 1 86 3.16E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 SUPERFAMILY SSF54211 88 178 2.88E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 Gene3D G3DSA:3.30.230.40 1 89 8.4E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.67 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 3.7E-64 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tbd_1711 2dc88359d3ec59c7ceb09676a39f9f98 195 Gene3D G3DSA:3.30.230.40 90 195 4.7E-38 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 SUPERFAMILY SSF47323 386 544 1.07E-41 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 690 5.5E-41 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Pfam PF09334 tRNA synthetases class I (M) 5 393 1.8E-150 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Pfam PF01588 Putative tRNA binding domain 588 687 6.0E-23 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 SUPERFAMILY SSF57770 139 173 2.88E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Gene3D G3DSA:1.10.730.10 386 524 1.0E-34 T 11-10-2018 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 SUPERFAMILY SSF50249 581 689 2.13E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 530 7.2E-171 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Gene3D G3DSA:3.40.50.620 5 381 2.1E-151 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 543 39.381 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 381 392 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 287 302 4.5E-23 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Gene3D G3DSA:2.20.28.20 139 173 2.1E-151 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 SUPERFAMILY SSF52374 4 384 1.62E-98 T 11-10-2018 Tbd_0860 5b158db2b37490d9065b792c6da024fe 690 Gene3D G3DSA:2.40.50.140 573 690 5.5E-33 T 11-10-2018 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 SUPERFAMILY SSF51621 3 262 6.28E-102 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 257 3.0E-109 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 262 2.2E-98 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 262 42.793 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 PIRSF PIRSF000388 1 262 9.9E-100 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tbd_2053 c331f64d4ae34cd4fc0330579f3466d0 262 Gene3D G3DSA:3.20.20.60 2 262 2.6E-108 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SUPERFAMILY SSF50447 271 409 2.21E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.2E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.2E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.2E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.2E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.2E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SUPERFAMILY SSF54980 608 693 5.28E-31 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SUPERFAMILY SSF52540 6 287 1.04E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Gene3D G3DSA:2.40.30.10 300 421 1.9E-50 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Pfam PF00679 Elongation factor G C-terminus 605 690 9.6E-33 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Gene3D G3DSA:3.30.70.240 609 679 1.7E-95 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SMART SM00838 605 692 3.0E-60 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.7E-19 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Gene3D G3DSA:3.30.70.870 438 488 4.8E-26 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SMART SM00889 485 603 5.3E-75 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Pfam PF14492 Elongation Factor G, domain II 409 482 1.3E-34 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Hamap MF_00054_B Elongation factor G [fusA]. 6 696 113.468 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 696 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Gene3D G3DSA:3.40.50.300 1 299 3.5E-112 T 11-10-2018 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SUPERFAMILY SSF54211 484 604 2.23E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 SUPERFAMILY SSF54980 409 486 1.37E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 3.2E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Gene3D G3DSA:3.30.230.10 489 692 1.7E-95 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.8E-64 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_0402 c616cffde1264e544b0c72d4c4fb9e8f 696 Pfam PF03764 Elongation factor G, domain IV 484 603 1.5E-49 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Gene3D G3DSA:2.170.120.12 52 174 6.7E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Gene3D G3DSA:1.10.150.20 242 325 1.3E-35 T 11-10-2018 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 153 3.9E-25 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 SUPERFAMILY SSF56553 52 175 3.79E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 260 323 4.0E-31 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 2.6E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 313 9.0E-109 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 225 2.5E-21 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 SMART SM00662 22 231 1.6E-97 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Gene3D G3DSA:3.30.1360.10 19 225 6.7E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 SUPERFAMILY SSF47789 248 321 3.27E-26 T 11-10-2018 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 SUPERFAMILY SSF55257 6 230 2.85E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0430 8831e814db8fb759d7bd3901357fa6bb 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 314 35.742 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_1652 5f37ed0af8f5baac2f3aed65e671fcb7 206 SUPERFAMILY SSF50324 28 199 3.79E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Tbd_1652 5f37ed0af8f5baac2f3aed65e671fcb7 206 Pfam PF00719 Inorganic pyrophosphatase 42 197 4.3E-53 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Tbd_1652 5f37ed0af8f5baac2f3aed65e671fcb7 206 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 38 198 36.466 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Tbd_1652 5f37ed0af8f5baac2f3aed65e671fcb7 206 Gene3D G3DSA:3.90.80.10 19 199 2.1E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Tbd_1652 5f37ed0af8f5baac2f3aed65e671fcb7 206 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 90 96 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Tbd_2308 b6e6272b204760379a6635087c1b8c2e 110 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 101 5.5E-31 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Tbd_2308 b6e6272b204760379a6635087c1b8c2e 110 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 100 2.0E-15 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Tbd_2308 b6e6272b204760379a6635087c1b8c2e 110 SUPERFAMILY SSF50022 1 106 7.07E-36 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_2308 b6e6272b204760379a6635087c1b8c2e 110 Gene3D G3DSA:2.102.10.10 1 109 1.3E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.0E-33 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 365 35.666 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 Gene3D G3DSA:3.40.50.2000 9 354 5.9E-111 T 11-10-2018 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 SUPERFAMILY SSF53756 7 365 6.96E-117 T 11-10-2018 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 347 3.3E-37 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 Gene3D G3DSA:3.40.50.2000 174 349 5.9E-111 T 11-10-2018 Tbd_0119 93a33a1e9cb09ed185f357f52965e62c 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 360 2.1E-98 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_1294 b35951818a85065c3526d77928d976d5 389 Pfam PF00482 Type II secretion system (T2SS), protein F 259 380 1.9E-24 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_1294 b35951818a85065c3526d77928d976d5 389 Pfam PF00482 Type II secretion system (T2SS), protein F 56 179 1.7E-27 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_1294 b35951818a85065c3526d77928d976d5 389 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 388 3.6E-14 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1294 b35951818a85065c3526d77928d976d5 389 PRINTS PR00812 Bacterial general secretion pathway protein F signature 52 64 3.6E-14 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1294 b35951818a85065c3526d77928d976d5 389 PRINTS PR00812 Bacterial general secretion pathway protein F signature 151 179 3.6E-14 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1294 b35951818a85065c3526d77928d976d5 389 PRINTS PR00812 Bacterial general secretion pathway protein F signature 353 367 3.6E-14 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1294 b35951818a85065c3526d77928d976d5 389 Gene3D G3DSA:1.20.81.30 242 349 3.3E-22 T 11-10-2018 Tbd_1294 b35951818a85065c3526d77928d976d5 389 Gene3D G3DSA:1.20.81.30 47 158 9.9E-23 T 11-10-2018 Tbd_0620 dac19dc7137e3e905a05018b900f62a5 280 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 52.296 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0620 dac19dc7137e3e905a05018b900f62a5 280 Pfam PF00793 DAHP synthetase I family 7 268 9.1E-70 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0620 dac19dc7137e3e905a05018b900f62a5 280 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 268 3.4E-123 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0620 dac19dc7137e3e905a05018b900f62a5 280 SUPERFAMILY SSF51569 2 270 2.84E-106 T 11-10-2018 Tbd_0620 dac19dc7137e3e905a05018b900f62a5 280 Gene3D G3DSA:3.20.20.70 2 276 3.4E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 365 383 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 5.1E-85 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 Gene3D G3DSA:3.40.50.1980 33 235 5.1E-126 T 11-10-2018 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 SUPERFAMILY SSF53720 31 431 1.65E-86 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 Pfam PF00815 Histidinol dehydrogenase 28 431 9.1E-167 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 Gene3D G3DSA:3.40.50.1980 237 353 5.1E-126 T 11-10-2018 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 431 41.082 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 430 9.7E-159 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_1713 c1bbff8fa7b990eb075dd98c34890fa1 434 PIRSF PIRSF000099 2 434 6.7E-159 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 PIRSF PIRSF037116 1 21 140.0 T 11-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 PIRSF PIRSF037116 28 276 5.5E-86 T 11-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 SUPERFAMILY SSF52540 5 271 1.11E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 Gene3D G3DSA:3.40.50.300 2 276 7.7E-65 T 11-10-2018 Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 Pfam PF00005 ABC transporter 43 199 7.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2292 f4db3a85ad81b1b559c06304cab7ac3c 276 SMART SM00382 52 249 5.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0204 d26bd52ec998d2951c4b3072a54c633f 205 Gene3D G3DSA:3.30.70.60 94 199 1.3E-35 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Tbd_0204 d26bd52ec998d2951c4b3072a54c633f 205 PIRSF PIRSF016482 1 204 5.8E-64 T 11-10-2018 IPR007445 Pilus assembly protein, PilO Tbd_0204 d26bd52ec998d2951c4b3072a54c633f 205 Gene3D G3DSA:1.10.287.540 57 93 5.4E-10 T 11-10-2018 Tbd_0204 d26bd52ec998d2951c4b3072a54c633f 205 Pfam PF04350 Pilus assembly protein, PilO 50 189 1.1E-53 T 11-10-2018 IPR007445 Pilus assembly protein, PilO Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82693 554 652 5.23E-14 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82714 182 265 7.85E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:1.20.1640.10 10 500 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82866 289 487 2.09E-50 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82693 136 323 1.06E-24 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.70.1430 555 650 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.70.1320 134 325 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82714 704 790 6.15E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:1.20.1640.10 501 1005 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.70.1440 651 848 0.0 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 608 622 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.0E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82866 788 1008 7.19E-40 T 11-10-2018 Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 Gene3D G3DSA:3.30.2090.10 178 268 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2319 75d2ba330892cfc24c820f048d267848 1023 SUPERFAMILY SSF82693 40 133 8.37E-27 T 11-10-2018 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF11880 Domain of unknown function (DUF3400) 1215 1259 2.1E-21 T 11-10-2018 IPR021817 Protein of unknown function DUF3400 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF12447 Protein of unknown function (DUF3683) 4 115 8.3E-52 T 11-10-2018 IPR022153 Protein of unknown function DUF3683 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 SUPERFAMILY SSF55103 399 755 1.31E-41 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF02754 Cysteine-rich domain 1000 1088 6.2E-6 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF02754 Cysteine-rich domain 1125 1212 0.014 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF01565 FAD binding domain 165 309 8.4E-21 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF02913 FAD linked oxidases, C-terminal domain 403 542 6.0E-6 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF02913 FAD linked oxidases, C-terminal domain 654 752 2.9E-18 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Gene3D G3DSA:3.30.465.40 125 324 3.1E-32 T 11-10-2018 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 SUPERFAMILY SSF56176 127 394 5.72E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Pfam PF13183 4Fe-4S dicluster domain 789 867 3.7E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 Gene3D G3DSA:3.30.70.2740 644 716 4.5E-7 T 11-10-2018 Tbd_0219 bd8a040f1bafae9b494c6ab923e4651f 1259 SUPERFAMILY SSF46548 780 883 2.44E-13 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 SMART SM00382 140 324 2.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 7.2E-67 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 SUPERFAMILY SSF52540 76 345 1.12E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.3E-21 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 57.047 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 457 5.1E-253 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 SUPERFAMILY SSF47917 343 458 8.63E-54 T 11-10-2018 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 SUPERFAMILY SSF50615 1 73 4.97E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Gene3D G3DSA:3.40.50.300 74 342 6.3E-114 T 11-10-2018 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Gene3D G3DSA:1.10.1140.10 343 459 1.1E-58 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2797 4aa1699e15425ea520261e09d95e155b 459 Gene3D G3DSA:2.40.10.170 1 73 1.1E-30 T 11-10-2018 Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 Gene3D G3DSA:3.40.50.300 250 464 3.5E-66 T 11-10-2018 Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 SMART SM00670 10 144 2.6E-13 T 11-10-2018 IPR002716 PIN domain Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 Gene3D G3DSA:3.40.50.1010 6 159 2.6E-27 T 11-10-2018 Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 Pfam PF13638 PIN domain 12 156 3.7E-40 T 11-10-2018 IPR002716 PIN domain Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 Pfam PF02562 PhoH-like protein 252 456 5.2E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Tbd_1728 90f34b271ebbcbbbfc01a9fa120e7d28 465 SUPERFAMILY SSF52540 93 444 1.12E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 28 184 51.568 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 PIRSF PIRSF006092 27 185 3.8E-47 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Pfam PF03449 Transcription elongation factor, N-terminal 31 101 8.9E-26 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Gene3D G3DSA:3.10.50.30 106 185 1.9E-29 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Gene3D G3DSA:1.10.287.180 29 103 1.6E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 30 184 1.6E-67 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 29 182 28.4 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 183 1.6E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 SUPERFAMILY SSF46557 30 104 3.79E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tbd_0520 55e651b846bc0ee20c4a3f34e5a0afb4 187 SUPERFAMILY SSF54534 109 183 3.4E-22 T 11-10-2018 Tbd_0686 28145c5328df7010a80022d7ece494a5 206 Gene3D G3DSA:3.40.50.1110 23 203 1.2E-62 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Tbd_0686 28145c5328df7010a80022d7ece494a5 206 SUPERFAMILY SSF52266 23 200 1.83E-49 T 11-10-2018 Tbd_0686 28145c5328df7010a80022d7ece494a5 206 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 186 5.8E-28 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 Pfam PF02541 Ppx/GppA phosphatase family 21 303 6.5E-71 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 SUPERFAMILY SSF53067 132 304 4.24E-45 T 11-10-2018 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 7 301 1.1E-98 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 Gene3D G3DSA:3.30.420.40 8 298 8.6E-88 T 11-10-2018 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 Gene3D G3DSA:3.30.420.150 111 290 8.6E-88 T 11-10-2018 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 SUPERFAMILY SSF53067 7 128 6.47E-35 T 11-10-2018 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 SUPERFAMILY SSF109604 308 487 4.29E-44 T 11-10-2018 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 PIRSF PIRSF001267 1 491 7.5E-188 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Tbd_1046 2d9c930f60f7b0b6ebf7d153dbbbc507 491 Gene3D G3DSA:1.10.3210.10 305 491 1.5E-56 T 11-10-2018 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 Pfam PF13672 Protein phosphatase 2C 32 216 1.7E-16 T 11-10-2018 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 410 422 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 SMART SM00332 17 256 5.1E-23 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 Pfam PF00069 Protein kinase domain 302 541 3.6E-33 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 SMART SM00331 43 258 1.4E-8 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 SUPERFAMILY SSF56112 274 553 2.16E-53 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 Gene3D G3DSA:1.10.510.10 372 555 2.0E-36 T 11-10-2018 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 SUPERFAMILY SSF81606 26 259 4.19E-46 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 Gene3D G3DSA:3.30.200.20 281 370 5.6E-8 T 11-10-2018 Tbd_1942 6f96f31d5c425b906bfd56e8633aaac3 621 Gene3D G3DSA:3.60.40.10 17 260 2.2E-39 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SUPERFAMILY SSF55874 318 490 6.02E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Gene3D G3DSA:3.40.50.2300 516 638 1.4E-43 T 11-10-2018 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Gene3D G3DSA:3.30.565.10 328 494 3.2E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 490 3.6E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SMART SM00387 377 492 2.5E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Gene3D G3DSA:1.10.287.130 224 327 4.9E-28 T 11-10-2018 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Pfam PF17152 Periplasmic sensor domain 49 144 6.3E-21 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SMART SM00304 182 235 2.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SMART SM00388 264 329 2.5E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Pfam PF00072 Response regulator receiver domain 523 633 5.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SUPERFAMILY SSF47384 253 330 1.04E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 329 3.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SMART SM00448 521 633 9.4E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SUPERFAMILY SSF52172 520 648 1.42E-41 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Pfam PF01627 Hpt domain 689 769 8.7E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SUPERFAMILY SSF47226 650 777 3.79E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 Gene3D G3DSA:1.20.120.160 661 775 5.2E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_1268 73cf6489653207ccc5ef26cfdf3d29a3 781 SMART SM00073 680 777 4.5E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 SUPERFAMILY SSF46946 2 114 3.97E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 5.3E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 Gene3D G3DSA:4.10.910.10 72 118 3.2E-27 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.1E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.411 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 PIRSF PIRSF002134 1 118 9.7E-43 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0427 fd34c15427070253c1e72d5786ce7d2a 118 Gene3D G3DSA:1.10.8.50 1 71 6.5E-27 T 11-10-2018 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Gene3D G3DSA:3.30.310.50 364 457 5.5E-28 T 11-10-2018 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 254 356 8.0E-20 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 SUPERFAMILY SSF53738 5 140 5.49E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Gene3D G3DSA:3.40.120.10 1 148 2.4E-53 T 11-10-2018 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 368 446 5.9E-13 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 200 213 4.3E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 166 185 4.3E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 4.3E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 244 4.3E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 SUPERFAMILY SSF53738 151 251 3.92E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 SUPERFAMILY SSF53738 254 350 1.45E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Gene3D G3DSA:3.40.120.10 168 245 5.5E-33 T 11-10-2018 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Gene3D G3DSA:3.40.120.10 246 363 4.2E-40 T 11-10-2018 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 249 3.4E-26 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 131 2.2E-35 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2138 322ba0074c90ba9d1be415b041bb3c51 457 SUPERFAMILY SSF55957 362 457 1.31E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 6.4E-39 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.70.1440 661 858 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82714 185 264 4.05E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.70.1320 135 324 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.70.1430 42 808 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.2090.10 179 270 4.4E-278 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.2090.10 712 800 4.4E-278 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:1.20.1640.10 15 502 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:1.20.1640.10 503 1013 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Gene3D G3DSA:3.30.70.1430 557 660 4.4E-278 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82714 713 797 9.29E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82693 142 323 2.62E-17 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82866 794 1016 2.49E-51 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82866 291 495 2.49E-40 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 Pfam PF00873 AcrB/AcrD/AcrF family 6 1015 1.1E-295 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 SUPERFAMILY SSF82693 43 127 3.66E-18 T 11-10-2018 Tbd_0143 c9a687b6244c54ca826754bb12160e73 1023 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1019 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 Gene3D G3DSA:1.20.5.1030 54 110 5.6E-18 T 11-10-2018 IPR038379 SecE superfamily Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 109 2.5E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 PRINTS PR01650 Bacterial translocase SecE signature 97 113 5.3E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 PRINTS PR01650 Bacterial translocase SecE signature 77 97 5.3E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 PRINTS PR01650 Bacterial translocase SecE signature 32 53 5.3E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 PRINTS PR01650 Bacterial translocase SecE signature 53 73 5.3E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 Hamap MF_00422 Protein translocase subunit SecE [secE]. 54 109 12.344 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0392 151995eac03f123bccd8b3b5703cb4a5 115 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 56 110 1.1E-18 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 SUPERFAMILY SSF51344 3 87 4.71E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 21.625 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.0E-7 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 Gene3D G3DSA:2.60.15.10 3 91 8.6E-30 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 Gene3D G3DSA:1.20.5.440 92 134 6.4E-13 T 11-10-2018 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 134 2.0E-42 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 SUPERFAMILY SSF46604 90 138 3.14E-12 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 6.5E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2796 0a3acec9757877cd1860e32c058df65e 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 88 3.0E-39 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Pfam PF03471 Transporter associated domain 345 425 2.8E-20 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 SMART SM00116 220 269 0.45 T 11-10-2018 IPR000644 CBS domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 SMART SM00116 282 330 1.5 T 11-10-2018 IPR000644 CBS domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Gene3D G3DSA:3.30.465.10 344 425 2.2E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Pfam PF01595 Domain of unknown function DUF21 5 196 3.0E-42 T 11-10-2018 IPR002550 CNNM, transmembrane domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 SUPERFAMILY SSF56176 342 431 8.18E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Gene3D G3DSA:3.10.580.10 192 343 2.4E-45 T 11-10-2018 Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 SMART SM01091 344 426 8.1E-29 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Pfam PF00571 CBS domain 217 266 8.4E-5 T 11-10-2018 IPR000644 CBS domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 Pfam PF00571 CBS domain 281 329 5.1E-5 T 11-10-2018 IPR000644 CBS domain Tbd_2313 eee0610745c9f5cf66b5090959bae885 438 SUPERFAMILY SSF54631 198 333 1.77E-27 T 11-10-2018 Tbd_1458 359abdfe44a223bee246c23f78236d61 509 Gene3D G3DSA:3.40.50.300 343 509 5.7E-30 T 11-10-2018 Tbd_1458 359abdfe44a223bee246c23f78236d61 509 SUPERFAMILY SSF56112 31 304 1.29E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_1458 359abdfe44a223bee246c23f78236d61 509 Pfam PF13671 AAA domain 348 496 1.6E-30 T 11-10-2018 Tbd_1458 359abdfe44a223bee246c23f78236d61 509 SUPERFAMILY SSF52540 341 504 3.16E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 Gene3D G3DSA:3.40.30.10 2 191 8.5E-72 T 11-10-2018 Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 4.4E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 SUPERFAMILY SSF52833 1 101 5.51E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 Gene3D G3DSA:1.20.1050.10 80 183 8.5E-72 T 11-10-2018 Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 184 6.3E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Tbd_1830 bc6d59d8b6b95c350c8a3b7bdfc6b3d4 199 SUPERFAMILY SSF47616 73 196 4.46E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Gene3D G3DSA:3.50.50.60 312 418 8.4E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Gene3D G3DSA:3.50.50.60 151 269 4.3E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 PRINTS PR00419 Adrenodoxin reductase family signature 152 174 2.8E-18 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 PRINTS PR00419 Adrenodoxin reductase family signature 217 227 2.8E-18 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 PRINTS PR00419 Adrenodoxin reductase family signature 283 297 2.8E-18 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 PRINTS PR00419 Adrenodoxin reductase family signature 175 188 2.8E-18 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 50 139 1.7E-12 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 SUPERFAMILY SSF46548 51 161 8.11E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Gene3D G3DSA:3.30.70.20 581 650 7.0E-9 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 632 643 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Gene3D G3DSA:1.10.1060.10 4 150 2.0E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 SUPERFAMILY SSF54862 54 649 6.7E-15 T 11-10-2018 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Pfam PF12838 4Fe-4S dicluster domain 594 645 2.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 151 469 4.4E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2477 3807ddced1f1c36d61b01d4433dc6997 653 SUPERFAMILY SSF51971 149 419 8.24E-58 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 Gene3D G3DSA:3.60.20.40 392 591 1.3E-56 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 Pfam PF01019 Gamma-glutamyltranspeptidase 40 588 1.5E-151 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 SUPERFAMILY SSF56235 18 591 6.37E-157 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 25 585 9.8E-140 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 Gene3D G3DSA:1.10.246.130 261 388 5.8E-38 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 455 470 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 121 139 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 479 496 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 275 294 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 47 72 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 158 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 245 261 4.7E-72 T 11-10-2018 Tbd_1410 8fc613ad6db9b675a5f313384f5dcdd3 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 416 434 4.7E-72 T 11-10-2018 Tbd_2157 a64d92539b3f2c816b38a57cf3d85017 171 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 60 149 2.3E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2157 a64d92539b3f2c816b38a57cf3d85017 171 SUPERFAMILY SSF46626 15 155 3.76E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2157 a64d92539b3f2c816b38a57cf3d85017 171 Gene3D G3DSA:1.10.760.10 44 157 7.5E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2157 a64d92539b3f2c816b38a57cf3d85017 171 PRINTS PR00605 Class IC cytochrome C signature 127 149 2.8E-7 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Tbd_2157 a64d92539b3f2c816b38a57cf3d85017 171 PRINTS PR00605 Class IC cytochrome C signature 70 81 2.8E-7 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 SUPERFAMILY SSF46626 17 205 1.83E-52 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 Gene3D G3DSA:1.10.760.10 26 206 7.2E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 PRINTS PR00603 Cytochrome C1 signature 206 221 1.7E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 PRINTS PR00603 Cytochrome C1 signature 44 63 1.7E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 PRINTS PR00603 Cytochrome C1 signature 187 206 1.7E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 PRINTS PR00603 Cytochrome C1 signature 24 43 1.7E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 Pfam PF02167 Cytochrome C1 family 33 77 2.0E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_1831 3b900e4f8e6cecc39385d097ff688240 241 Pfam PF02167 Cytochrome C1 family 99 240 7.8E-14 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Tbd_0012 456478401f28b6893cefc1c1b8499c3d 320 SUPERFAMILY SSF102405 45 251 8.93E-45 T 11-10-2018 Tbd_0012 456478401f28b6893cefc1c1b8499c3d 320 Gene3D G3DSA:3.40.50.450 3 250 1.4E-96 T 11-10-2018 Tbd_0012 456478401f28b6893cefc1c1b8499c3d 320 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 34 251 2.9E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tbd_0012 456478401f28b6893cefc1c1b8499c3d 320 Gene3D G3DSA:1.10.10.10 251 317 4.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0012 456478401f28b6893cefc1c1b8499c3d 320 Pfam PF02481 DNA recombination-mediator protein A 36 242 4.5E-75 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 SUPERFAMILY SSF52540 96 381 1.8E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.77 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.0E-13 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.0E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 SUPERFAMILY SSF47917 383 510 3.14E-46 T 11-10-2018 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 PIRSF PIRSF039088 1 512 3.9E-237 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 1.9E-249 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Gene3D G3DSA:3.40.50.300 94 382 2.6E-131 T 11-10-2018 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Gene3D G3DSA:1.20.150.20 383 513 2.0E-47 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 5.5E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 SUPERFAMILY SSF50615 10 94 4.51E-28 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2799 a0b90c3a15c38adf09534f859bef2ebc 513 Gene3D G3DSA:2.40.30.20 1 93 1.6E-32 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_0811 aa31e60c16c1f0095a680d2af76c5155 223 SUPERFAMILY SSF64438 1 223 1.72E-81 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tbd_0811 aa31e60c16c1f0095a680d2af76c5155 223 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 7 222 4.2E-58 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Tbd_0811 aa31e60c16c1f0095a680d2af76c5155 223 Gene3D G3DSA:3.60.140.10 1 223 2.0E-90 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Tbd_0811 aa31e60c16c1f0095a680d2af76c5155 223 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 2 221 9.1E-81 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.801 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 1.9E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 SUPERFAMILY SSF54862 36 144 5.44E-25 T 11-10-2018 Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 138 3.7E-45 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1150 09f30c546ee1222b7270bc99dd8b3c64 162 Gene3D G3DSA:3.30.70.3270 36 162 1.3E-36 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Pfam PF13654 AAA domain 33 545 8.1E-157 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 652 671 1.3E-12 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 1.3E-12 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 682 701 1.3E-12 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 712 730 1.3E-12 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 SUPERFAMILY SSF52540 36 539 4.65E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Gene3D G3DSA:3.30.230.10 548 778 6.3E-83 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 655 738 1.4E-9 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Gene3D G3DSA:3.40.50.300 8 164 6.8E-21 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Gene3D G3DSA:3.40.50.300 217 455 1.1E-51 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 Gene3D G3DSA:1.10.8.60 456 542 4.9E-5 T 11-10-2018 Tbd_0676 570e2d5cae05a25602ee0a7dcb6ec3e1 810 SUPERFAMILY SSF54211 572 760 5.31E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 SUPERFAMILY SSF56281 146 351 1.62E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 Gene3D G3DSA:3.60.15.10 134 375 7.1E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 Gene3D G3DSA:3.40.250.10 7 125 4.4E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 SMART SM00450 9 126 2.8E-16 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 SMART SM00849 146 313 5.7E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 Pfam PF00753 Metallo-beta-lactamase superfamily 144 313 4.7E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 SUPERFAMILY SSF52821 9 122 4.06E-18 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1282 09dbb451f6eb34664d8b67f15a50b435 397 Pfam PF00581 Rhodanese-like domain 19 120 8.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1697 cce38a2312b03ff4198c128ec7e6fece 281 Gene3D G3DSA:1.10.600.10 1 278 5.4E-83 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_1697 cce38a2312b03ff4198c128ec7e6fece 281 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 11 279 5.0E-114 T 11-10-2018 IPR017828 Squalene synthase HpnD-like GO:0016117|GO:0016767 Tbd_1697 cce38a2312b03ff4198c128ec7e6fece 281 Pfam PF00494 Squalene/phytoene synthase 13 268 1.6E-74 T 11-10-2018 Tbd_1697 cce38a2312b03ff4198c128ec7e6fece 281 SUPERFAMILY SSF48576 3 280 6.12E-83 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_1697 cce38a2312b03ff4198c128ec7e6fece 281 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 156 181 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 9.0E-20 T 11-10-2018 Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 Pfam PF00936 BMC domain 9 84 2.0E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 Gene3D G3DSA:3.30.70.1710 2 91 7.6E-35 T 11-10-2018 Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 SUPERFAMILY SSF143414 9 95 5.36E-27 T 11-10-2018 IPR037233 CcmK-like superfamily Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 SMART SM00877 8 85 4.5E-29 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2646 4dfeded535b9bb77083f8bb8ea809dca 99 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Tbd_2105 dfd919f96a2461fac9a2aadc0d79b812 127 Gene3D G3DSA:3.30.70.60 1 92 1.7E-32 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Tbd_2105 dfd919f96a2461fac9a2aadc0d79b812 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.836 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_2105 dfd919f96a2461fac9a2aadc0d79b812 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 9.2E-33 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2105 dfd919f96a2461fac9a2aadc0d79b812 127 Pfam PF01250 Ribosomal protein S6 3 91 7.9E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2105 dfd919f96a2461fac9a2aadc0d79b812 127 SUPERFAMILY SSF54995 1 103 1.96E-37 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Gene3D G3DSA:1.10.443.10 110 290 3.4E-69 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 296 57.793 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 89 3.4E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Pfam PF00589 Phage integrase family 112 281 2.3E-53 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 8 295 1.2E-115 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Gene3D G3DSA:1.10.150.130 2 97 1.9E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 2 296 60.137 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Tbd_2378 a6b95bd2b88927115354ca379349fc1c 296 SUPERFAMILY SSF56349 4 287 7.95E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 PIRSF PIRSF002465 2 338 2.3E-136 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 Gene3D G3DSA:3.40.718.10 2 338 9.6E-137 T 11-10-2018 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 Pfam PF02504 Fatty acid synthesis protein 5 326 8.0E-116 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 SUPERFAMILY SSF53659 4 332 2.88E-113 T 11-10-2018 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 334 2.7E-118 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tbd_1552 9a7f276a8ac5dd820cd3b70432c32523 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 158.174 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 SMART SM00245 174 382 1.7E-68 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 SMART SM00228 101 172 1.5E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 SUPERFAMILY SSF50156 89 185 5.58E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 Pfam PF13180 PDZ domain 101 180 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 SUPERFAMILY SSF52096 38 386 1.28E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 Gene3D G3DSA:3.90.226.10 189 379 2.7E-90 T 11-10-2018 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 387 4.8E-100 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 Pfam PF03572 Peptidase family S41 200 381 2.6E-55 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 Gene3D G3DSA:2.30.42.10 101 188 2.7E-90 T 11-10-2018 Tbd_2392 5f6159fee805c45636564c7a9e4d1873 468 Gene3D G3DSA:3.30.750.44 47 357 2.7E-90 T 11-10-2018 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 Gene3D G3DSA:1.10.760.10 180 262 6.4E-31 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 SUPERFAMILY SSF46626 80 153 2.62E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 183 258 1.0E-17 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 80 153 4.4E-18 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 Gene3D G3DSA:1.10.760.10 73 156 3.2E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 SUPERFAMILY SSF46626 164 264 4.87E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 PRINTS PR00607 Class IE cytochrome C signature 205 215 9.8E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 PRINTS PR00607 Class IE cytochrome C signature 233 245 9.8E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 PRINTS PR00607 Class IE cytochrome C signature 248 259 9.8E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0146 0fff4dccf9ccfa109d916548fffdc5ac 266 PRINTS PR00607 Class IE cytochrome C signature 194 205 9.8E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Gene3D G3DSA:1.10.220.30 1 85 9.7E-18 T 11-10-2018 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PIRSF PIRSF003161 1 333 1.8E-115 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Pfam PF14841 FliG middle domain 116 185 2.1E-25 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Gene3D G3DSA:1.10.220.30 195 333 2.9E-44 T 11-10-2018 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 SUPERFAMILY SSF48029 5 115 6.15E-20 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Pfam PF01706 FliG C-terminal domain 218 324 4.0E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 SUPERFAMILY SSF48029 114 324 4.58E-65 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 248 268 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 272 298 2.1E-65 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Gene3D G3DSA:1.10.220.30 89 190 4.5E-27 T 11-10-2018 Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 Pfam PF14842 FliG N-terminal domain 3 101 4.7E-30 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Tbd_1601 de96dd4ff7a5bddd81047e22b10638eb 333 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 330 1.8E-106 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 SUPERFAMILY SSF46626 61 214 3.35E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Gene3D G3DSA:1.10.760.10 187 274 2.3E-70 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 42 88 9.0E-21 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 46 305 4.3E-85 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Gene3D G3DSA:1.10.760.10 108 302 2.3E-70 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 SUPERFAMILY SSF46626 215 306 6.69E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 PIRSF PIRSF000006 5 306 1.9E-91 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Gene3D G3DSA:1.20.58.1490 5 99 4.9E-28 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 134 206 3.9E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0640 79b72ec3b11a9ea6b5270ba27792342f 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 218 283 6.9E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1589 57e11652029ce0cd15982b041621bc65 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 528 1.6E-42 T 11-10-2018 IPR000160 GGDEF domain Tbd_1589 57e11652029ce0cd15982b041621bc65 538 SMART SM00267 358 529 4.0E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_1589 57e11652029ce0cd15982b041621bc65 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 525 4.7E-38 T 11-10-2018 IPR000160 GGDEF domain Tbd_1589 57e11652029ce0cd15982b041621bc65 538 Gene3D G3DSA:3.30.70.270 363 532 1.0E-48 T 11-10-2018 Tbd_1589 57e11652029ce0cd15982b041621bc65 538 SUPERFAMILY SSF55073 374 529 9.42E-43 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2472 4a7113fcf1519dd048ba2f520e3cb5ee 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 80 1.6E-7 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Tbd_2472 4a7113fcf1519dd048ba2f520e3cb5ee 106 Gene3D G3DSA:2.60.300.12 1 101 3.1E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_2472 4a7113fcf1519dd048ba2f520e3cb5ee 106 SUPERFAMILY SSF89360 1 93 7.46E-15 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 Gene3D G3DSA:3.30.1300.10 176 277 9.6E-32 T 11-10-2018 Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 275 8.5E-94 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 Pfam PF02569 Pantoate-beta-alanine ligase 2 273 3.0E-97 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 SUPERFAMILY SSF52374 1 275 7.79E-99 T 11-10-2018 Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 Gene3D G3DSA:3.40.50.620 2 174 3.6E-68 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2054 4499dd79319743a5a812bdbbd2e11409 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 38.945 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 SUPERFAMILY SSF52540 147 388 7.01E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 SMART SM00448 6 120 3.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Pfam PF00072 Response regulator receiver domain 8 120 1.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 SUPERFAMILY SSF52172 6 191 1.12E-33 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Gene3D G3DSA:3.40.50.300 136 317 1.1E-65 T 11-10-2018 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 3.9E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 3.9E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Gene3D G3DSA:1.10.8.60 318 395 7.9E-24 T 11-10-2018 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 SMART SM00382 167 310 7.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 449 5.1E-238 T 11-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Pfam PF00158 Sigma-54 interaction domain 147 313 6.6E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Pfam PF02954 Bacterial regulatory protein, Fis family 406 440 2.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 SUPERFAMILY SSF46689 360 448 2.51E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Gene3D G3DSA:1.10.10.60 399 449 6.9E-12 T 11-10-2018 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 Gene3D G3DSA:3.40.50.2300 1 135 5.0E-25 T 11-10-2018 Tbd_0197 3a1850aa0c4394400d570d39bd7220e1 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tbd_0312 555e1d417246e5702cf4530ac6349b51 216 Pfam PF13489 Methyltransferase domain 17 173 6.8E-23 T 11-10-2018 Tbd_0312 555e1d417246e5702cf4530ac6349b51 216 SUPERFAMILY SSF53335 9 192 5.53E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0312 555e1d417246e5702cf4530ac6349b51 216 Gene3D G3DSA:3.40.50.150 14 198 1.9E-41 T 11-10-2018 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Gene3D G3DSA:3.30.930.10 14 467 1.1E-239 T 11-10-2018 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 SUPERFAMILY SSF55681 13 480 2.49E-103 T 11-10-2018 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 71 89 1.4E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 147 158 1.4E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 107 118 1.4E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 137 145 1.4E-18 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 PIRSF PIRSF001535 4 575 1.6E-266 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 558 3.1E-229 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Gene3D G3DSA:3.40.50.800 7 553 1.1E-239 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 98 461 5.5E-47 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 SUPERFAMILY SSF52954 465 573 5.73E-25 T 11-10-2018 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Pfam PF04073 Aminoacyl-tRNA editing domain 260 376 4.9E-28 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 SUPERFAMILY SSF55826 221 392 6.8E-32 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Gene3D G3DSA:3.90.960.10 243 391 1.1E-239 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Pfam PF03129 Anticodon binding domain 478 572 4.1E-13 T 11-10-2018 IPR004154 Anticodon-binding Tbd_2112 eb333d90bef198099b8b8537f11ef8f9 579 Hamap MF_01569 Proline--tRNA ligase [proS]. 4 578 41.809 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 1.1E-94 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Gene3D G3DSA:3.30.479.20 57 149 6.8E-27 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 SUPERFAMILY SSF54713 56 147 5.76E-23 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Gene3D G3DSA:3.30.479.20 155 270 1.9E-39 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 288 78.576 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Gene3D G3DSA:1.10.286.20 190 236 1.9E-39 T 11-10-2018 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 SUPERFAMILY SSF54713 151 288 8.24E-48 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Pfam PF00889 Elongation factor TS 73 271 1.2E-69 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 Gene3D G3DSA:1.10.8.10 1 56 1.7E-23 T 11-10-2018 Tbd_0786 0b7fd7490672be0b71fdebecd90d5226 290 SUPERFAMILY SSF46934 3 56 5.0E-15 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Gene3D G3DSA:3.30.1360.30 273 423 4.4E-201 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 SUPERFAMILY SSF50249 1 105 1.37E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Pfam PF02938 GAD domain 309 409 6.9E-28 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Gene3D G3DSA:2.40.50.140 1 105 7.3E-34 T 11-10-2018 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 1.2E-251 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 SUPERFAMILY SSF55261 292 420 4.58E-42 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 3.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 3.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 3.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.2E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 562 3.1E-110 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 SUPERFAMILY SSF55681 110 589 2.77E-109 T 11-10-2018 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 588 34.387 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Pfam PF01336 OB-fold nucleic acid binding domain 18 81 5.4E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tbd_0442 72dc0806b15f393ecea9812d26592e8e 597 Gene3D G3DSA:3.30.930.10 117 586 4.4E-201 T 11-10-2018 Tbd_1709 c6316f737b3f3f7a58306ac71800ac06 251 SUPERFAMILY SSF51366 1 239 6.44E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_1709 c6316f737b3f3f7a58306ac71800ac06 251 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.259 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Tbd_1709 c6316f737b3f3f7a58306ac71800ac06 251 Pfam PF00977 Histidine biosynthesis protein 3 232 2.3E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tbd_1709 c6316f737b3f3f7a58306ac71800ac06 251 Gene3D G3DSA:3.20.20.70 1 242 5.9E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1709 c6316f737b3f3f7a58306ac71800ac06 251 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 7.3E-78 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 51.877 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 137 2.0E-44 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 Pfam PF02381 MraZ protein, putative antitoxin-like 1 73 1.1E-14 T 11-10-2018 IPR020603 MraZ domain Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 Pfam PF02381 MraZ protein, putative antitoxin-like 79 137 2.9E-16 T 11-10-2018 IPR020603 MraZ domain Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 Gene3D G3DSA:2.40.330.20 1 142 2.1E-43 T 11-10-2018 IPR038619 MraZ superfamily Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 6.0E-76 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tbd_0110 4986ef610d2ac36b11f7aab8077f838d 148 SUPERFAMILY SSF89447 1 136 6.43E-44 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Gene3D G3DSA:3.30.70.260 646 722 1.3E-18 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Gene3D G3DSA:3.30.460.10 210 341 1.9E-47 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 SMART SM00954 252 362 6.5E-66 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 SUPERFAMILY SSF55021 649 721 4.17E-11 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Pfam PF04607 Region found in RelA / SpoT proteins 252 362 8.9E-38 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Pfam PF02824 TGS domain 404 463 2.2E-21 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 SUPERFAMILY SSF81271 391 463 7.41E-22 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 SUPERFAMILY SSF109604 20 208 6.59E-31 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 SUPERFAMILY SSF81301 197 408 4.9E-64 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Pfam PF13291 ACT domain 646 721 4.0E-20 T 11-10-2018 IPR002912 ACT domain Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 44 721 2.0E-173 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Gene3D G3DSA:3.10.20.30 397 470 4.7E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Gene3D G3DSA:1.10.3210.10 11 208 1.8E-34 T 11-10-2018 Tbd_1758 a390e8501068667862731bf65c0ee2c7 722 Pfam PF13328 HD domain 41 193 2.6E-31 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_1741 00e021f0515e547325663981aee0909a 1038 SMART SM00926 76 160 1.9E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1741 00e021f0515e547325663981aee0909a 1038 Pfam PF00384 Molybdopterin oxidoreductase 238 721 1.2E-13 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1741 00e021f0515e547325663981aee0909a 1038 Pfam PF01568 Molydopterin dinucleotide binding domain 912 1006 2.4E-13 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tbd_1741 00e021f0515e547325663981aee0909a 1038 Gene3D G3DSA:2.40.40.20 868 1023 3.0E-21 T 11-10-2018 Tbd_1741 00e021f0515e547325663981aee0909a 1038 Gene3D G3DSA:3.40.50.740 74 743 6.1E-69 T 11-10-2018 Tbd_1741 00e021f0515e547325663981aee0909a 1038 SUPERFAMILY SSF50692 888 1014 5.88E-27 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_1741 00e021f0515e547325663981aee0909a 1038 SUPERFAMILY SSF53706 77 876 3.14E-112 T 11-10-2018 Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 SUPERFAMILY SSF52540 4 236 7.14E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 SMART SM00382 28 230 1.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 9.1E-116 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 Pfam PF00005 ABC transporter 20 165 2.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0534 eb6c0978dfe2674bb004fd7e7c05dbea 240 Gene3D G3DSA:3.40.50.300 2 240 3.7E-69 T 11-10-2018 Tbd_1679 cc361b6868e355ee49b39cbc78a7e752 356 Pfam PF00589 Phage integrase family 194 348 4.1E-24 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_1679 cc361b6868e355ee49b39cbc78a7e752 356 Gene3D G3DSA:1.10.150.130 87 192 7.1E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_1679 cc361b6868e355ee49b39cbc78a7e752 356 Gene3D G3DSA:1.10.443.10 193 356 1.3E-32 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_1679 cc361b6868e355ee49b39cbc78a7e752 356 SUPERFAMILY SSF56349 89 353 6.18E-54 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Gene3D G3DSA:3.30.460.10 20 191 2.3E-56 T 11-10-2018 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 222 283 9.9E-19 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 SUPERFAMILY SSF81301 25 192 3.81E-38 T 11-10-2018 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Pfam PF12626 Polymerase A arginine-rich C-terminus 336 450 3.0E-45 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 SUPERFAMILY SSF81891 193 427 2.62E-54 T 11-10-2018 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 18 451 35.969 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Pfam PF01743 Poly A polymerase head domain 55 195 1.3E-36 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 Gene3D G3DSA:1.10.3090.10 193 436 3.4E-86 T 11-10-2018 Tbd_2050 251aabeded695ac6b62c69ac0c19c00d 462 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 452 1.4E-150 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.0E-22 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 Gene3D G3DSA:3.40.50.12280 1 158 6.3E-77 T 11-10-2018 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 SUPERFAMILY SSF56770 9 153 1.44E-65 T 11-10-2018 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.055 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1143 90ad91e2b62b5535bb9a56a4dcbdac95 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.9E-76 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1026 87681a33bded7d6c6a5b822cb5d9f873 83 Gene3D G3DSA:3.10.20.30 2 83 5.4E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_1026 87681a33bded7d6c6a5b822cb5d9f873 83 SUPERFAMILY SSF54285 1 81 9.72E-20 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tbd_1026 87681a33bded7d6c6a5b822cb5d9f873 83 Pfam PF02597 ThiS family 6 83 4.1E-18 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tbd_1026 87681a33bded7d6c6a5b822cb5d9f873 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 83 4.2E-20 T 11-10-2018 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 SUPERFAMILY SSF53850 94 293 4.11E-45 T 11-10-2018 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 SUPERFAMILY SSF46785 3 82 2.43E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 Pfam PF03466 LysR substrate binding domain 92 292 6.5E-53 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 Gene3D G3DSA:3.40.190.290 95 299 6.6E-45 T 11-10-2018 Tbd_2625 2dfd3278f1aa28f99c909d4be2b2ce9c 313 Gene3D G3DSA:1.10.10.10 5 94 1.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 SUPERFAMILY SSF52374 7 669 1.0E-142 T 11-10-2018 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 SUPERFAMILY SSF50677 226 420 5.44E-50 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Pfam PF08264 Anticodon-binding domain of tRNA 702 819 1.4E-11 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 856 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Gene3D G3DSA:3.90.740.10 227 419 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 11-10-2018 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 SUPERFAMILY SSF47323 663 856 4.67E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 607 2.7E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 619 659 3.4E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Gene3D G3DSA:3.10.330.110 573 629 0.0 T 11-10-2018 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Gene3D G3DSA:3.40.50.620 33 572 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Gene3D G3DSA:3.10.20.590 799 857 1.4E-21 T 11-10-2018 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.166 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Pfam PF09334 tRNA synthetases class I (M) 39 171 9.7E-18 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 5.5E-50 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tbd_2445 bd9478efe93b06adf43be5bdbf0694a0 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 408 2.8E-69 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Tbd_2482 d5314fbed17ede138d1b3d102fc06fa7 131 Gene3D G3DSA:3.40.1260.10 11 131 3.7E-41 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2482 d5314fbed17ede138d1b3d102fc06fa7 131 SUPERFAMILY SSF75169 14 131 4.32E-39 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2482 d5314fbed17ede138d1b3d102fc06fa7 131 Pfam PF02635 DsrE/DsrF-like family 15 131 5.3E-28 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_2482 d5314fbed17ede138d1b3d102fc06fa7 131 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 16 131 1.1E-42 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 SUPERFAMILY SSF51984 6 92 6.15E-30 T 11-10-2018 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 463 43.412 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Pfam PF01225 Mur ligase family, catalytic domain 7 104 3.0E-27 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Gene3D G3DSA:3.90.190.20 308 462 3.0E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 401 7.2E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 SUPERFAMILY SSF53244 309 457 1.28E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 SUPERFAMILY SSF53623 91 308 2.35E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 455 2.3E-170 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Gene3D G3DSA:3.40.1190.10 94 307 2.0E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Pfam PF08245 Mur ligase middle domain 110 290 1.6E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_0120 eaf9fa50cca78a9496724a5f3b626315 463 Gene3D G3DSA:3.40.50.720 6 92 1.6E-33 T 11-10-2018 Tbd_1881 2a4402f7f56a843ea04c0b3aa060b685 252 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 252 2.3E-141 T 11-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 Tbd_1881 2a4402f7f56a843ea04c0b3aa060b685 252 SUPERFAMILY SSF53448 1 252 9.69E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1881 2a4402f7f56a843ea04c0b3aa060b685 252 Pfam PF00483 Nucleotidyl transferase 1 206 6.0E-17 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_1881 2a4402f7f56a843ea04c0b3aa060b685 252 Gene3D G3DSA:3.90.550.10 1 252 3.4E-71 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 43.102 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 3.4E-36 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 SMART SM01210 328 420 7.0E-48 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 SUPERFAMILY SSF56059 102 321 9.55E-65 T 11-10-2018 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 SUPERFAMILY SSF51246 327 420 1.52E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 3.6E-78 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Gene3D G3DSA:3.40.50.20 1 93 6.3E-37 T 11-10-2018 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 SUPERFAMILY SSF52440 1 101 3.88E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Gene3D G3DSA:3.90.600.10 328 425 1.9E-34 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 6.0E-172 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Gene3D G3DSA:3.30.1490.20 119 188 3.2E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 1.3E-27 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 SMART SM01209 101 294 7.6E-137 T 11-10-2018 Tbd_2459 494ce0e4982b3449e59ae92dde7bacf6 425 Gene3D G3DSA:3.30.470.20 189 327 1.5E-59 T 11-10-2018 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 PIRSF PIRSF000497 1 387 1.0E-172 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 4.7E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 SUPERFAMILY SSF55973 113 235 1.81E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.795 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 1.8E-42 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 SUPERFAMILY SSF55973 4 110 2.9E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Gene3D G3DSA:3.30.300.10 12 273 7.7E-179 T 11-10-2018 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 SUPERFAMILY SSF55973 236 386 1.06E-67 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 7.7E-47 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Gene3D G3DSA:3.30.300.10 6 236 7.7E-179 T 11-10-2018 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 385 1.7E-186 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tbd_2521 c07aab802fa0d0ce4dbdd97580f2c292 388 Gene3D G3DSA:3.30.300.10 103 378 7.7E-179 T 11-10-2018 Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 128 142 0.23 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 292 0.015 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 4.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 178 1.0E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 1 325 37.198 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 SUPERFAMILY SSF51161 31 316 1.79E-79 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Gene3D G3DSA:3.40.1390.10 1 97 1.7E-23 T 11-10-2018 Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 87 4.6E-19 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 8.4E-116 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Tbd_0795 e0c7ab955ab8e874a0410c1ab00f64b4 343 Gene3D G3DSA:2.160.10.10 98 308 2.1E-65 T 11-10-2018 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SUPERFAMILY SSF141868 447 696 2.22E-89 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SMART SM00052 442 686 1.3E-114 T 11-10-2018 IPR001633 EAL domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SMART SM00267 248 432 2.8E-61 T 11-10-2018 IPR000160 GGDEF domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 430 1.4E-40 T 11-10-2018 IPR000160 GGDEF domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Pfam PF00072 Response regulator receiver domain 7 113 6.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 427 2.1E-43 T 11-10-2018 IPR000160 GGDEF domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Gene3D G3DSA:3.40.50.2300 2 128 2.6E-32 T 11-10-2018 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SUPERFAMILY SSF55073 264 433 4.71E-47 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Gene3D G3DSA:3.30.450.20 129 254 5.3E-15 T 11-10-2018 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 254 1.1E-6 T 11-10-2018 IPR000014 PAS domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Gene3D G3DSA:3.30.70.270 261 443 6.4E-58 T 11-10-2018 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SUPERFAMILY SSF55785 126 246 2.62E-13 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SUPERFAMILY SSF52172 6 136 7.83E-37 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Gene3D G3DSA:3.20.20.450 444 701 1.1E-99 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Pfam PF00563 EAL domain 448 681 4.6E-72 T 11-10-2018 IPR001633 EAL domain Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 Pfam PF08448 PAS fold 141 249 4.6E-10 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1269 e226442660cfe1a4b919ff908e0e6961 705 SMART SM00448 5 117 4.5E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1152 db7725f334126f7c75761b2039f29195 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 3.1E-22 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Tbd_1152 db7725f334126f7c75761b2039f29195 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.455 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Tbd_2640 199b69312b7e44744cf928588267125c 703 Gene3D G3DSA:3.30.750.24 571 691 1.4E-20 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2640 199b69312b7e44744cf928588267125c 703 SUPERFAMILY SSF52091 582 688 2.55E-15 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2640 199b69312b7e44744cf928588267125c 703 Pfam PF01740 STAS domain 584 682 5.3E-13 T 11-10-2018 IPR002645 STAS domain Tbd_2640 199b69312b7e44744cf928588267125c 703 Pfam PF00916 Sulfate permease family 363 523 1.9E-47 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Tbd_2640 199b69312b7e44744cf928588267125c 703 Pfam PF00916 Sulfate permease family 25 236 5.2E-48 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 PIRSF PIRSF006305 1 197 2.7E-39 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 SUPERFAMILY SSF52972 6 189 1.83E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 Hamap MF_00528 Septum formation protein Maf [maf]. 7 195 27.02 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 Pfam PF02545 Maf-like protein 8 190 7.6E-42 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 Gene3D G3DSA:3.90.950.10 6 197 1.8E-54 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_1557 f2f7174b0f06b2f7d20ee89e35b6294b 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 188 1.8E-43 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 Gene3D G3DSA:1.10.8.60 331 435 2.2E-35 T 11-10-2018 Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 438 41.611 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 SMART SM00382 46 328 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 SUPERFAMILY SSF52540 1 414 1.16E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 1 438 6.2E-203 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 SMART SM01086 331 426 4.1E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 104 1.4E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_2542 25c573ecfa0c5c91b32d66d427730337 438 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 325 9.1E-40 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 5 389 70.191 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 PIRSF PIRSF000521 112 151 0.016 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 PIRSF PIRSF000521 3 117 1.5E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 PIRSF PIRSF000521 161 389 8.6E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 213 250 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 6 386 2.3E-146 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 SUPERFAMILY SSF53383 4 387 4.31E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 Gene3D G3DSA:3.90.1150.10 14 378 4.7E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 Pfam PF00202 Aminotransferase class-III 14 385 7.0E-113 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_1851 b3eecf4fe14cc46b4f5b6205071607bf 394 Gene3D G3DSA:3.40.640.10 49 295 4.7E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 SMART SM00028 114 147 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 SMART SM00028 70 103 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 SMART SM00028 33 69 52.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 SMART SM00028 186 219 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 392 32.675 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Gene3D G3DSA:1.25.40.10 108 293 1.5E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Pfam PF13432 Tetratricopeptide repeat 49 90 0.0014 T 11-10-2018 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Pfam PF13432 Tetratricopeptide repeat 191 243 1.4E-6 T 11-10-2018 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Pfam PF13432 Tetratricopeptide repeat 120 173 0.0015 T 11-10-2018 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 Gene3D G3DSA:1.25.40.10 26 103 1.9E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0959 6d7ba259c54dd08f7dc81af3399434c3 394 SUPERFAMILY SSF48452 24 245 9.86E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 PIRSF PIRSF002599 1 68 1.3E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 Gene3D G3DSA:2.40.50.140 2 66 3.3E-30 T 11-10-2018 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 PRINTS PR00050 Cold shock protein signature 40 58 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 PRINTS PR00050 Cold shock protein signature 25 34 1.7E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 SUPERFAMILY SSF50249 1 67 6.21E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.5E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 SMART SM00357 3 67 8.1E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Tbd_0679 7d3324e12d2c1045f1b502c9f6ed9597 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site Tbd_2295 bbe4336f5836be9d6583bbc6ef8c3ebb 193 PIRSF PIRSF020680 1 190 1.3E-55 T 11-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Tbd_2295 bbe4336f5836be9d6583bbc6ef8c3ebb 193 SUPERFAMILY SSF159709 12 185 3.4E-38 T 11-10-2018 IPR038058 PhnH-like superfamily Tbd_2295 bbe4336f5836be9d6583bbc6ef8c3ebb 193 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 9 185 5.8E-43 T 11-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Tbd_2295 bbe4336f5836be9d6583bbc6ef8c3ebb 193 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 9 184 5.9E-48 T 11-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Tbd_2295 bbe4336f5836be9d6583bbc6ef8c3ebb 193 Gene3D G3DSA:3.40.50.11310 8 186 1.3E-35 T 11-10-2018 IPR038058 PhnH-like superfamily Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 Gene3D G3DSA:3.90.1580.10 330 428 1.0E-9 T 11-10-2018 Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 Gene3D G3DSA:3.90.1580.10 188 329 2.0E-27 T 11-10-2018 Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 19 425 4.4E-167 T 11-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 Pfam PF12867 DinB superfamily 24 156 1.7E-10 T 11-10-2018 IPR024775 DinB-like domain Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 SUPERFAMILY SSF56436 188 427 8.71E-69 T 11-10-2018 IPR016187 C-type lectin fold Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 Pfam PF03781 Sulfatase-modifying factor enzyme 1 194 325 1.3E-23 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 Pfam PF03781 Sulfatase-modifying factor enzyme 1 345 425 1.4E-7 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Tbd_1281 992f2410a30e1cb7a7d087decfba4676 428 SUPERFAMILY SSF109854 14 153 2.11E-5 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Tbd_2789 a8da17684b31dea6e2d0a23ca93efec8 269 Pfam PF08534 Redoxin 134 254 5.1E-16 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tbd_2789 a8da17684b31dea6e2d0a23ca93efec8 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 99 3.6E-6 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tbd_2789 a8da17684b31dea6e2d0a23ca93efec8 269 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_2789 a8da17684b31dea6e2d0a23ca93efec8 269 Gene3D G3DSA:3.40.30.10 126 268 9.9E-32 T 11-10-2018 Tbd_2789 a8da17684b31dea6e2d0a23ca93efec8 269 SUPERFAMILY SSF52833 136 265 2.9E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 4.7E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 SMART SM00862 150 225 6.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 SUPERFAMILY SSF52172 3 128 6.26E-45 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 Gene3D G3DSA:3.40.50.2300 2 128 2.4E-39 T 11-10-2018 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 8.8E-108 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 SUPERFAMILY SSF46894 124 226 8.29E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 SMART SM00448 3 116 2.6E-48 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 Pfam PF00072 Response regulator receiver domain 5 117 6.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0216 ec3d33a6f44525aa81100ad5391d2ddb 230 Gene3D G3DSA:1.10.10.10 129 228 1.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1733 427347923e11e23c2508ba6bd0568036 477 SMART SM00487 24 227 7.1E-59 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_1733 427347923e11e23c2508ba6bd0568036 477 SMART SM00490 263 344 1.2E-30 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1733 427347923e11e23c2508ba6bd0568036 477 Gene3D G3DSA:3.40.50.300 218 378 8.0E-48 T 11-10-2018 Tbd_1733 427347923e11e23c2508ba6bd0568036 477 Gene3D G3DSA:3.40.50.300 2 215 5.7E-77 T 11-10-2018 Tbd_1733 427347923e11e23c2508ba6bd0568036 477 SUPERFAMILY SSF52540 79 365 3.06E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1733 427347923e11e23c2508ba6bd0568036 477 Pfam PF00271 Helicase conserved C-terminal domain 239 344 8.8E-27 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1733 427347923e11e23c2508ba6bd0568036 477 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 5 464 48.253 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 Tbd_1733 427347923e11e23c2508ba6bd0568036 477 Pfam PF00270 DEAD/DEAH box helicase 29 199 4.2E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_1733 427347923e11e23c2508ba6bd0568036 477 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Tbd_1083 c360c5a7ab9ee43a6f979c497f057d89 304 Pfam PF00005 ABC transporter 23 164 1.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1083 c360c5a7ab9ee43a6f979c497f057d89 304 Gene3D G3DSA:3.40.50.300 2 233 4.7E-69 T 11-10-2018 Tbd_1083 c360c5a7ab9ee43a6f979c497f057d89 304 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1083 c360c5a7ab9ee43a6f979c497f057d89 304 SMART SM00382 31 210 2.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1083 c360c5a7ab9ee43a6f979c497f057d89 304 SUPERFAMILY SSF52540 3 228 2.27E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Gene3D G3DSA:3.30.70.270 498 665 1.7E-59 T 11-10-2018 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Gene3D G3DSA:3.20.20.450 666 919 1.0E-77 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SUPERFAMILY SSF55073 507 664 1.65E-51 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SMART SM00091 374 442 3.0 T 11-10-2018 IPR000014 PAS domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SMART SM00091 225 293 4.6E-9 T 11-10-2018 IPR000014 PAS domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SUPERFAMILY SSF55785 218 334 3.7E-22 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Pfam PF00563 EAL domain 682 914 6.3E-63 T 11-10-2018 IPR001633 EAL domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Pfam PF00672 HAMP domain 168 213 3.7E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SUPERFAMILY SSF141868 682 918 1.96E-69 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 348 1.2E-16 T 11-10-2018 IPR000014 PAS domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Pfam PF08447 PAS fold 249 327 4.4E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SMART SM00052 675 919 6.9E-75 T 11-10-2018 IPR001633 EAL domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Gene3D G3DSA:3.30.450.20 221 365 3.8E-22 T 11-10-2018 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SMART SM00304 166 218 7.3E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Gene3D G3DSA:1.20.1480.50 135 220 2.3E-9 T 11-10-2018 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SUPERFAMILY SSF55785 363 489 4.19E-13 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SMART SM00267 490 663 8.2E-60 T 11-10-2018 IPR000160 GGDEF domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Pfam PF08448 PAS fold 381 493 2.9E-14 T 11-10-2018 IPR013656 PAS fold-4 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Gene3D G3DSA:3.30.450.20 366 497 4.2E-18 T 11-10-2018 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 SUPERFAMILY SSF158472 169 214 4.84E-8 T 11-10-2018 Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 Pfam PF00990 Diguanylate cyclase, GGDEF domain 502 658 7.0E-49 T 11-10-2018 IPR000160 GGDEF domain Tbd_0152 7e6aae37408c8c257c1024831a06f6ee 928 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 662 5.1E-44 T 11-10-2018 IPR000160 GGDEF domain Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 257 543 1.5E-103 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 157 230 3.1E-21 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 9.5E-29 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 SUPERFAMILY SSF51621 257 551 7.07E-100 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Gene3D G3DSA:3.50.30.10 7 238 2.4E-71 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 1.2E-27 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 1.2E-27 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 1.2E-27 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 298 317 1.2E-27 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 SUPERFAMILY SSF47831 27 146 1.14E-29 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Gene3D G3DSA:1.10.274.10 24 149 2.4E-71 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 189 200 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 Gene3D G3DSA:3.20.20.60 239 572 1.2E-112 T 11-10-2018 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 569 2.3E-160 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 SUPERFAMILY SSF52009 115 239 1.1E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tbd_2414 88c1b52433e233d36e65eacd621e7572 574 PIRSF PIRSF000732 1 572 5.5E-205 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Pfam PF02780 Transketolase, C-terminal domain 489 605 1.6E-27 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 SMART SM00861 313 477 2.5E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 277 8.3E-122 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Gene3D G3DSA:3.40.50.920 489 615 3.0E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 613 2.1E-263 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 SUPERFAMILY SSF52518 311 499 5.15E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Pfam PF02779 Transketolase, pyrimidine binding domain 312 472 6.1E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 SUPERFAMILY SSF52518 4 375 1.8E-81 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 SUPERFAMILY SSF52922 485 613 5.1E-33 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 614 46.898 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0879 3218a79c05c1692a6b3f4c666039f4d8 618 Gene3D G3DSA:3.40.50.970 311 480 1.5E-67 T 11-10-2018 Tbd_2330 4b4f52ab447c0a1ebe03ff19f1a0c193 201 Pfam PF13649 Methyltransferase domain 39 131 2.5E-14 T 11-10-2018 Tbd_2330 4b4f52ab447c0a1ebe03ff19f1a0c193 201 SUPERFAMILY SSF53335 2 178 6.39E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2330 4b4f52ab447c0a1ebe03ff19f1a0c193 201 Gene3D G3DSA:3.40.50.150 5 201 6.7E-48 T 11-10-2018 Tbd_2514 981c2c11f539107b205a6934bad74720 204 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 13 200 5.2E-40 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB Tbd_2514 981c2c11f539107b205a6934bad74720 204 Pfam PF13036 Peptidoglycan-synthase activator LpoB 56 198 3.2E-46 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB Tbd_2514 981c2c11f539107b205a6934bad74720 204 Gene3D G3DSA:3.40.50.10610 54 201 1.9E-18 T 11-10-2018 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 122 321 1.5E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 121 342 35.201 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 199 210 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 122 390 1.3E-73 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 Gene3D G3DSA:3.40.1010.10 107 228 1.6E-40 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 Gene3D G3DSA:3.30.950.10 229 347 1.7E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tbd_0108 bcaa48bdfabeaea7a8e130e5620b8924 397 SUPERFAMILY SSF53790 120 340 6.02E-75 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tbd_2798 c3de992b153cf672126dd262b2784065 290 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 4.6E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 PRINTS PR00126 ATP synthase gamma subunit signature 237 256 4.6E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 4.6E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 PRINTS PR00126 ATP synthase gamma subunit signature 268 289 4.6E-38 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 Gene3D G3DSA:3.40.1380.10 61 209 2.4E-104 T 11-10-2018 Tbd_2798 c3de992b153cf672126dd262b2784065 290 Gene3D G3DSA:1.10.287.80 6 286 2.4E-104 T 11-10-2018 Tbd_2798 c3de992b153cf672126dd262b2784065 290 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 290 35.721 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 290 2.7E-105 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 276 289 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 Pfam PF00231 ATP synthase 5 289 4.6E-94 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2798 c3de992b153cf672126dd262b2784065 290 SUPERFAMILY SSF52943 4 290 7.65E-95 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 PIRSF PIRSF006223 5 112 4.5E-29 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 13 110 4.2E-26 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 SUPERFAMILY SSF69721 12 111 1.02E-28 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 Gene3D G3DSA:3.30.1420.10 12 40 3.0E-5 T 11-10-2018 Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 Pfam PF04358 DsrC like protein 13 110 2.3E-29 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2326 33d00ea862c33daf2aeb5e82669286fd 115 Gene3D G3DSA:1.10.10.370 42 111 2.1E-22 T 11-10-2018 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 Gene3D G3DSA:3.40.50.10210 53 327 2.2E-121 T 11-10-2018 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 Gene3D G3DSA:1.10.1610.10 21 344 2.2E-121 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 9 346 36.538 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 Pfam PF02277 Phosphoribosyltransferase 7 344 2.6E-126 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 SUPERFAMILY SSF52733 5 345 4.84E-111 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tbd_2712 3a800385f120cc98a6f9430b6da3f032 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 344 1.8E-127 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 SUPERFAMILY SSF81624 2 135 5.76E-41 T 11-10-2018 IPR035937 MutM-like, N-terminal Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Gene3D G3DSA:1.10.8.50 132 270 5.4E-47 T 11-10-2018 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 SUPERFAMILY SSF46946 131 223 5.3E-28 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Gene3D G3DSA:3.20.190.10 2 128 1.5E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 42.897 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 6.8E-26 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 SUPERFAMILY SSF57716 218 269 3.42E-17 T 11-10-2018 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Pfam PF06827 Zinc finger found in FPG and IleRS 244 269 3.1E-10 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 1.2E-90 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 SMART SM01232 130 222 9.7E-47 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 5.3E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Tbd_0383 e00bb1ae7a3ed67f5199082b8a06488e 270 SMART SM00898 2 116 1.7E-49 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Tbd_0470 a942f072c3c467740b37b08ae0cc067f 126 Gene3D G3DSA:3.30.1330.40 3 125 2.1E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tbd_0470 a942f072c3c467740b37b08ae0cc067f 126 Pfam PF01042 Endoribonuclease L-PSP 9 123 3.8E-40 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Tbd_0470 a942f072c3c467740b37b08ae0cc067f 126 SUPERFAMILY SSF55298 3 125 1.73E-44 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tbd_0470 a942f072c3c467740b37b08ae0cc067f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 7.8E-51 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 SUPERFAMILY SSF50692 1 122 3.11E-48 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.4E-49 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.1E-49 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 8.0E-65 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.422 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 Gene3D G3DSA:2.40.40.20 1 126 1.1E-54 T 11-10-2018 Tbd_2055 5eb2a071f8d5b592bc0cf4badd2ba7f0 126 PIRSF PIRSF006246 1 126 1.4E-50 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 460 9.6E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Pfam PF11127 Protein of unknown function (DUF2892) 97 150 4.0E-8 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 463 1.3E-46 T 11-10-2018 IPR000160 GGDEF domain Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Pfam PF08448 PAS fold 189 292 1.6E-5 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Gene3D G3DSA:3.30.70.270 297 469 1.8E-57 T 11-10-2018 Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 SMART SM00267 292 464 2.0E-64 T 11-10-2018 IPR000160 GGDEF domain Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Gene3D G3DSA:3.30.450.20 167 290 1.1E-11 T 11-10-2018 Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 SUPERFAMILY SSF141868 483 728 8.11E-77 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 SUPERFAMILY SSF55785 184 291 1.05E-9 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Pfam PF00563 EAL domain 482 715 3.3E-63 T 11-10-2018 IPR001633 EAL domain Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 Gene3D G3DSA:3.20.20.450 477 732 1.0E-83 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 SUPERFAMILY SSF55073 308 464 2.04E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 SMART SM00052 475 720 4.5E-91 T 11-10-2018 IPR001633 EAL domain Tbd_1366 e836acc5e1c077f3db6d94703579537b 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 189 298 1.0E-8 T 11-10-2018 IPR000014 PAS domain Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 9 183 33.593 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 Gene3D G3DSA:3.40.50.1470 7 194 5.1E-65 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 10 190 1.1E-56 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 SUPERFAMILY SSF53178 10 190 1.83E-64 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tbd_0389 b79acd022bacd7b1ef0ef8e92f8a3ea0 202 Pfam PF01195 Peptidyl-tRNA hydrolase 11 188 2.1E-55 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Gene3D G3DSA:3.30.110.120 254 372 3.2E-140 T 11-10-2018 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 SUPERFAMILY SSF55821 176 390 2.29E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Gene3D G3DSA:3.30.420.360 386 742 1.1E-102 T 11-10-2018 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Pfam PF00708 Acylphosphatase 9 68 5.5E-18 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 SUPERFAMILY SSF54975 4 91 1.46E-20 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 9 743 4.0E-216 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 ProSitePatterns PS00150 Acylphosphatase signature 1. 11 21 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Pfam PF07503 HypF finger 159 191 4.2E-15 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Pfam PF07503 HypF finger 109 142 2.6E-17 T 11-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Gene3D G3DSA:3.90.870.50 9 363 3.2E-140 T 11-10-2018 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Pfam PF01300 Telomere recombination 212 385 1.4E-51 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 PIRSF PIRSF006256 3 753 1.8E-250 T 11-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tbd_1385 39adb3f2ea14b42feea24dc1e95db1f3 753 Gene3D G3DSA:3.30.420.350 484 733 1.1E-102 T 11-10-2018 Tbd_0743 edc01f0b0799504b0b1a0ce87ca67c39 330 SUPERFAMILY SSF53756 15 309 1.02E-26 T 11-10-2018 Tbd_0743 edc01f0b0799504b0b1a0ce87ca67c39 330 Pfam PF00534 Glycosyl transferases group 1 199 290 5.3E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_0743 edc01f0b0799504b0b1a0ce87ca67c39 330 Gene3D G3DSA:3.40.50.2000 158 296 6.5E-21 T 11-10-2018 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 238 39.732 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 234 4.5E-53 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 SMART SM00934 4 233 3.5E-95 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 Gene3D G3DSA:3.20.20.70 1 239 1.3E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 SUPERFAMILY SSF51366 2 235 8.8E-71 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_0960 3a45684db61f7c5993f2a47bf6e22604 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 232 7.2E-46 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 Pfam PF00355 Rieske [2Fe-2S] domain 97 182 5.7E-11 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 Gene3D G3DSA:1.20.5.510 4 44 5.8E-6 T 11-10-2018 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 Gene3D G3DSA:2.102.10.10 47 195 7.7E-50 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 44 1.1E-11 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 195 1.1E-72 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 PRINTS PR00162 Rieske 2Fe-2S subunit signature 154 166 3.5E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 PRINTS PR00162 Rieske 2Fe-2S subunit signature 123 134 3.5E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Tbd_1833 bdd57db5b71e7d335bafef871a7f8b56 201 SUPERFAMILY SSF50022 34 194 9.82E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 3.2E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 41.788 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 253 2.3E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 Pfam PF00557 Metallopeptidase family M24 13 246 7.5E-58 T 11-10-2018 IPR000994 Peptidase M24 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 SUPERFAMILY SSF55920 4 254 2.22E-94 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tbd_0784 781e1f6eb22ae2396c9bc9775dc9e196 269 Gene3D G3DSA:3.90.230.10 1 260 2.8E-111 T 11-10-2018 Tbd_1608 88517c026678a84a84b05253074ebc80 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 51 67 4.8E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tbd_1608 88517c026678a84a84b05253074ebc80 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 112 4.8E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tbd_1608 88517c026678a84a84b05253074ebc80 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 97 4.8E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tbd_1608 88517c026678a84a84b05253074ebc80 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 68 84 4.8E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tbd_1608 88517c026678a84a84b05253074ebc80 132 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 48 122 3.4E-32 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1608 88517c026678a84a84b05253074ebc80 132 SUPERFAMILY SSF101801 48 130 6.02E-25 T 11-10-2018 IPR036429 SpoA-like superfamily Tbd_1608 88517c026678a84a84b05253074ebc80 132 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 52 121 2.4E-23 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tbd_1608 88517c026678a84a84b05253074ebc80 132 Gene3D G3DSA:2.30.330.10 39 132 1.1E-33 T 11-10-2018 IPR036429 SpoA-like superfamily Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 SUPERFAMILY SSF53383 28 388 3.72E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 9 389 54.957 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 PIRSF PIRSF001434 2 389 2.7E-131 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 388 8.7E-138 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 Gene3D G3DSA:3.90.1150.10 258 389 2.9E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 Gene3D G3DSA:3.40.640.10 3 254 7.5E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1907 f5c096a5299c3714936424f5d6ab055a 389 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 8 388 1.7E-179 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Tbd_1782 a1ccbef43621c5d316b382210b90716d 302 Gene3D G3DSA:3.40.50.300 2 302 2.6E-48 T 11-10-2018 Tbd_1782 a1ccbef43621c5d316b382210b90716d 302 SUPERFAMILY SSF52540 3 289 8.5E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1782 a1ccbef43621c5d316b382210b90716d 302 Pfam PF00685 Sulfotransferase domain 6 241 4.7E-8 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Pfam PF00005 ABC transporter 19 184 1.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 SUPERFAMILY SSF52540 312 520 5.56E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Pfam PF00005 ABC transporter 335 468 5.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 SUPERFAMILY SSF52540 4 235 1.68E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Pfam PF16326 ABC transporter C-terminal domain 560 626 1.6E-17 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Gene3D G3DSA:1.10.287.380 550 629 2.9E-18 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Gene3D G3DSA:3.40.50.300 280 548 2.2E-63 T 11-10-2018 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Pfam PF12848 ABC transporter 223 294 1.1E-10 T 11-10-2018 IPR032781 ABC-transporter extension domain Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 SMART SM00382 28 229 9.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 SMART SM00382 343 513 8.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2810 5fdc75f54bd976b8149e52b50c15aed0 631 Gene3D G3DSA:3.40.50.300 6 278 1.5E-69 T 11-10-2018 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 ProSitePatterns PS00902 Glutamate 5-kinase signature. 212 229 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 SUPERFAMILY SSF88697 282 372 6.63E-26 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 SMART SM00359 282 365 6.4E-15 T 11-10-2018 IPR002478 PUA domain GO:0003723 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 Gene3D G3DSA:2.30.130.10 271 373 7.3E-34 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 371 4.1E-134 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 Gene3D G3DSA:3.40.1160.10 2 270 6.2E-93 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 Pfam PF01472 PUA domain 284 356 5.2E-22 T 11-10-2018 IPR002478 PUA domain GO:0003723 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 268 36.128 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 Pfam PF00696 Amino acid kinase family 11 239 5.4E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 SUPERFAMILY SSF53633 10 260 2.09E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PIRSF PIRSF000729 5 374 2.4E-135 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tbd_1120 7b41865e5e666f89dfc4923b25822ef1 374 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 3.0E-51 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 SMART SM00382 40 336 5.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 SMART SM00487 22 207 7.4E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Gene3D G3DSA:1.20.120.1080 414 515 7.2E-23 T 11-10-2018 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 SMART SM00847 430 520 1.5E-36 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Pfam PF04408 Helicase associated domain (HA2) 433 515 9.2E-21 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 19 1266 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 SMART SM00490 269 370 1.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Gene3D G3DSA:3.40.50.300 202 387 6.0E-54 T 11-10-2018 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 SUPERFAMILY SSF52540 25 528 7.31E-104 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Gene3D G3DSA:3.40.50.300 6 200 4.0E-78 T 11-10-2018 Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Pfam PF11898 Domain of unknown function (DUF3418) 689 1266 9.2E-193 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Pfam PF00271 Helicase conserved C-terminal domain 251 369 2.4E-11 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2008 41971e80ee7a0e1311cf295a5b32a94d 1275 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 584 672 1.2E-12 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 Pfam PF12221 Bacterial membrane protein N terminal 1 39 2.7E-14 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 Gene3D G3DSA:3.30.479.30 130 240 8.8E-17 T 11-10-2018 Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 SMART SM00244 76 249 8.2E-21 T 11-10-2018 IPR001107 Band 7 domain Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 TIGRFAM TIGR01933 hflK: HflK protein 78 351 1.7E-96 T 11-10-2018 IPR010201 HflK GO:0016021 Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 Pfam PF01145 SPFH domain / Band 7 family 80 264 2.3E-25 T 11-10-2018 IPR001107 Band 7 domain Tbd_0603 077d17bd42bf5a85fc5764ee1cffa4cb 395 SUPERFAMILY SSF117892 140 256 6.67E-17 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Tbd_2585 41a19a44b1edda4fb4bd334e0501efb1 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 471 2.6E-38 T 11-10-2018 IPR000160 GGDEF domain Tbd_2585 41a19a44b1edda4fb4bd334e0501efb1 479 SUPERFAMILY SSF55073 321 475 2.67E-41 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2585 41a19a44b1edda4fb4bd334e0501efb1 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 475 8.3E-37 T 11-10-2018 IPR000160 GGDEF domain Tbd_2585 41a19a44b1edda4fb4bd334e0501efb1 479 SMART SM00267 305 476 4.6E-48 T 11-10-2018 IPR000160 GGDEF domain Tbd_2585 41a19a44b1edda4fb4bd334e0501efb1 479 Gene3D G3DSA:3.30.70.270 310 478 2.1E-45 T 11-10-2018 Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 Pfam PF01478 Type IV leader peptidase family 132 241 1.6E-28 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 122 1.6E-34 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 209 220 7.1E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 208 7.1E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 236 7.1E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Tbd_2368 1e7afb9408762aeb01ec1044d9a9dcfa 283 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 141 158 7.1E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Tbd_2236 438232458daa554610246de62d328d36 155 SUPERFAMILY SSF52172 27 149 2.13E-23 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2236 438232458daa554610246de62d328d36 155 SMART SM00448 29 145 1.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2236 438232458daa554610246de62d328d36 155 Pfam PF00072 Response regulator receiver domain 31 145 5.5E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2236 438232458daa554610246de62d328d36 155 Gene3D G3DSA:3.40.50.2300 25 155 1.7E-21 T 11-10-2018 Tbd_0321 2cded3b134fdc5589bc089b32881057a 247 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 245 9.8E-68 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Tbd_0321 2cded3b134fdc5589bc089b32881057a 247 SUPERFAMILY SSF53474 3 245 8.73E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0321 2cded3b134fdc5589bc089b32881057a 247 Pfam PF00561 alpha/beta hydrolase fold 6 234 1.3E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0321 2cded3b134fdc5589bc089b32881057a 247 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 247 35.547 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Tbd_0321 2cded3b134fdc5589bc089b32881057a 247 Gene3D G3DSA:3.40.50.1820 2 246 2.9E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1682 d6451e15c5e4603dc469c53245216f3d 153 SUPERFAMILY SSF50199 19 145 6.15E-38 T 11-10-2018 Tbd_1682 d6451e15c5e4603dc469c53245216f3d 153 SMART SM00318 18 138 1.6E-36 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tbd_1682 d6451e15c5e4603dc469c53245216f3d 153 ProSitePatterns PS01123 Thermonuclease family signature 1. 29 53 - T 11-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 Tbd_1682 d6451e15c5e4603dc469c53245216f3d 153 Gene3D G3DSA:2.40.50.90 13 141 5.3E-32 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily Tbd_1682 d6451e15c5e4603dc469c53245216f3d 153 Pfam PF00565 Staphylococcal nuclease homologue 43 138 6.0E-24 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tbd_0846 215c935f8e494324cbb42e37bc877985 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.8E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Tbd_0846 215c935f8e494324cbb42e37bc877985 202 SUPERFAMILY SSF52833 1 100 1.17E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0846 215c935f8e494324cbb42e37bc877985 202 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 187 4.9E-12 T 11-10-2018 Tbd_0846 215c935f8e494324cbb42e37bc877985 202 Gene3D G3DSA:1.20.1050.10 79 192 1.0E-68 T 11-10-2018 Tbd_0846 215c935f8e494324cbb42e37bc877985 202 Gene3D G3DSA:3.40.30.10 7 198 1.0E-68 T 11-10-2018 Tbd_0846 215c935f8e494324cbb42e37bc877985 202 SUPERFAMILY SSF47616 69 200 8.91E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 SUPERFAMILY SSF51905 77 407 2.72E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 114 124 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 TIGRFAM TIGR02053 MerA: mercury(II) reductase 81 541 3.9E-169 T 11-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Gene3D G3DSA:3.50.50.60 84 399 1.0E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 417 523 1.2E-29 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 SUPERFAMILY SSF55008 2 68 1.7E-14 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Pfam PF00403 Heavy-metal-associated domain 6 64 5.2E-8 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Gene3D G3DSA:3.50.50.60 225 341 1.0E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 SUPERFAMILY SSF55424 416 539 6.01E-34 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Gene3D G3DSA:3.30.70.100 5 69 2.0E-15 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 81 398 1.8E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 217 234 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 272 287 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 514 533 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 15 25 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 449 469 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 126 145 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 252 269 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PRINTS PR00945 Mercuric reductase class II signature 91 109 1.4E-65 T 11-10-2018 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 Gene3D G3DSA:3.30.390.30 416 541 1.1E-43 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_1341 c5a3314a565f4853b6ec32f83477f0c1 541 PIRSF PIRSF000350 1 541 1.5E-251 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Tbd_2188 a8e81ff587563cc6bfe3a6a253b896b1 433 SUPERFAMILY SSF51412 53 426 1.14E-35 T 11-10-2018 Tbd_2188 a8e81ff587563cc6bfe3a6a253b896b1 433 Gene3D G3DSA:3.20.20.70 50 431 1.4E-50 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2188 a8e81ff587563cc6bfe3a6a253b896b1 433 Pfam PF03060 Nitronate monooxygenase 54 418 9.5E-36 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tbd_0085 79a174159ff1163908f124223b49c81e 738 Pfam PF00989 PAS fold 169 273 1.6E-13 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_0085 79a174159ff1163908f124223b49c81e 738 Gene3D G3DSA:3.40.50.2300 26 159 2.8E-36 T 11-10-2018 Tbd_0085 79a174159ff1163908f124223b49c81e 738 SUPERFAMILY SSF55073 310 467 2.67E-52 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0085 79a174159ff1163908f124223b49c81e 738 SMART SM00267 294 466 3.5E-69 T 11-10-2018 IPR000160 GGDEF domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 Gene3D G3DSA:3.30.450.20 160 300 4.1E-27 T 11-10-2018 Tbd_0085 79a174159ff1163908f124223b49c81e 738 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 462 4.2E-52 T 11-10-2018 IPR000160 GGDEF domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 SUPERFAMILY SSF52172 28 185 3.56E-40 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0085 79a174159ff1163908f124223b49c81e 738 Gene3D G3DSA:3.20.20.450 480 729 4.0E-100 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0085 79a174159ff1163908f124223b49c81e 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 161 299 3.6E-20 T 11-10-2018 IPR000014 PAS domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 Pfam PF00072 Response regulator receiver domain 31 140 1.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0085 79a174159ff1163908f124223b49c81e 738 SUPERFAMILY SSF141868 482 728 1.44E-87 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0085 79a174159ff1163908f124223b49c81e 738 SMART SM00052 476 721 4.0E-119 T 11-10-2018 IPR001633 EAL domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 Gene3D G3DSA:3.30.70.270 301 479 9.8E-62 T 11-10-2018 Tbd_0085 79a174159ff1163908f124223b49c81e 738 SMART SM00091 165 231 7.7E-16 T 11-10-2018 IPR000014 PAS domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 SUPERFAMILY SSF55785 155 290 4.19E-22 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0085 79a174159ff1163908f124223b49c81e 738 SMART SM00448 29 140 3.7E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0085 79a174159ff1163908f124223b49c81e 738 Pfam PF00563 EAL domain 482 716 4.4E-73 T 11-10-2018 IPR001633 EAL domain Tbd_0085 79a174159ff1163908f124223b49c81e 738 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 464 3.6E-42 T 11-10-2018 IPR000160 GGDEF domain Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 Pfam PF05036 Sporulation related domain 342 409 3.9E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 Gene3D G3DSA:3.30.70.1070 326 432 1.1E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 SMART SM00382 42 191 0.002 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 Gene3D G3DSA:3.40.50.300 26 183 5.4E-10 T 11-10-2018 Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 SUPERFAMILY SSF52540 5 262 3.49E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0550 21bbd0a1e73e4f037834b702234b81d5 437 Pfam PF13401 AAA domain 42 169 6.7E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 SUPERFAMILY SSF109998 54 253 2.09E-28 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 Pfam PF00639 PPIC-type PPIASE domain 287 382 4.5E-26 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 Pfam PF13624 SurA N-terminal domain 16 175 3.2E-50 T 11-10-2018 Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 Gene3D G3DSA:3.10.50.40 281 385 7.5E-36 T 11-10-2018 Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 Gene3D G3DSA:1.10.4030.30 55 177 8.5E-13 T 11-10-2018 Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 SUPERFAMILY SSF54534 277 386 2.16E-29 T 11-10-2018 Tbd_1673 9fda9ba935e8ef4c731b44717a54a0e7 647 Gene3D G3DSA:1.10.4030.30 257 392 7.5E-36 T 11-10-2018 Tbd_1596 e29d64dc9c6e08054769f403873cc4b5 124 SUPERFAMILY SSF160544 32 112 9.55E-20 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tbd_1596 e29d64dc9c6e08054769f403873cc4b5 124 Pfam PF01312 FlhB HrpN YscU SpaS Family 38 108 1.2E-13 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1596 e29d64dc9c6e08054769f403873cc4b5 124 Gene3D G3DSA:3.40.1690.10 32 114 1.7E-20 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Pfam PF07730 Histidine kinase 431 496 1.3E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 SUPERFAMILY SSF158472 209 255 2.62E-9 T 11-10-2018 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 SMART SM00387 537 630 7.4E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Pfam PF00672 HAMP domain 209 254 3.5E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Gene3D G3DSA:1.10.287.130 206 287 4.5E-7 T 11-10-2018 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 SUPERFAMILY SSF55781 298 426 1.18E-7 T 11-10-2018 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 SMART SM00304 207 259 3.7E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Gene3D G3DSA:3.30.450.40 310 431 9.1E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 SUPERFAMILY SSF55874 534 628 2.1E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Gene3D G3DSA:3.30.565.10 498 630 6.6E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 PIRSF PIRSF003167 10 640 1.7E-202 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 52 149 1.1E-12 T 11-10-2018 IPR029095 NarX-like, N-terminal Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Pfam PF13492 GAF domain 299 414 8.2E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 627 1.4E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1400 5a09111e2549f17c94a9dee139013b2d 644 Gene3D G3DSA:1.20.120.960 56 179 3.7E-13 T 11-10-2018 Tbd_1975 2161479e367d63850e2cd0ae9ef921a3 376 SUPERFAMILY SSF47240 45 373 5.28E-95 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_1975 2161479e367d63850e2cd0ae9ef921a3 376 Pfam PF00268 Ribonucleotide reductase, small chain 56 343 1.0E-84 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_1975 2161479e367d63850e2cd0ae9ef921a3 376 Gene3D G3DSA:1.10.620.20 32 369 1.3E-113 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Tbd_1975 2161479e367d63850e2cd0ae9ef921a3 376 PIRSF PIRSF000355 26 376 4.8E-136 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Gene3D G3DSA:3.40.50.10070 25 166 3.2E-40 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF04052 TolB amino-terminal domain 29 131 1.3E-26 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 426 5.9E-162 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 SUPERFAMILY SSF69304 156 427 3.01E-59 T 11-10-2018 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Gene3D G3DSA:2.120.10.30 167 427 4.2E-88 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF07676 WD40-like Beta Propeller Repeat 285 315 5.0E-13 T 11-10-2018 IPR011659 WD40-like Beta Propeller Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF07676 WD40-like Beta Propeller Repeat 202 227 4.2E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF07676 WD40-like Beta Propeller Repeat 370 396 0.15 T 11-10-2018 IPR011659 WD40-like Beta Propeller Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF07676 WD40-like Beta Propeller Repeat 237 270 1.6E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Pfam PF07676 WD40-like Beta Propeller Repeat 324 355 1.2E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 SUPERFAMILY SSF52964 35 163 9.42E-36 T 11-10-2018 Tbd_2206 0f2f5c501ad4786cbe72007ab1500f49 427 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 10 425 47.007 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Tbd_2505 8febbed79cdee6ff284ccbf29145f758 232 Gene3D G3DSA:1.10.3810.10 49 229 1.1E-58 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_2505 8febbed79cdee6ff284ccbf29145f758 232 Pfam PF00912 Transglycosylase 60 221 8.1E-57 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_2505 8febbed79cdee6ff284ccbf29145f758 232 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 3 231 39.28 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_2505 8febbed79cdee6ff284ccbf29145f758 232 SUPERFAMILY SSF53955 59 225 6.47E-61 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_2505 8febbed79cdee6ff284ccbf29145f758 232 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 230 5.5E-95 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_1524 a08d5452ddc931e4d479a14b3db70491 434 Gene3D G3DSA:1.20.1250.20 219 425 1.5E-21 T 11-10-2018 Tbd_1524 a08d5452ddc931e4d479a14b3db70491 434 Gene3D G3DSA:1.20.1250.20 11 204 4.5E-30 T 11-10-2018 Tbd_1524 a08d5452ddc931e4d479a14b3db70491 434 SUPERFAMILY SSF103473 5 423 9.42E-57 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1524 a08d5452ddc931e4d479a14b3db70491 434 Pfam PF07690 Major Facilitator Superfamily 22 364 1.7E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 41 195 1.7E-59 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 PIRSF PIRSF016262 17 217 3.3E-59 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 SUPERFAMILY SSF55681 18 214 4.31E-69 T 11-10-2018 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 88 141 6.0E-23 T 11-10-2018 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 Hamap MF_00013 Octanoyltransferase [lipB]. 18 215 36.338 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 Gene3D G3DSA:3.30.930.10 15 217 6.0E-67 T 11-10-2018 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 172 5.8E-7 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tbd_0269 76d7051c331fc44fc97bac34c6e38b99 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 84 99 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tbd_2407 b6733490ca153d1d54e1558e52eb7d46 154 PIRSF PIRSF029256 1 153 2.5E-63 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Tbd_2407 b6733490ca153d1d54e1558e52eb7d46 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.634 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Tbd_2407 b6733490ca153d1d54e1558e52eb7d46 154 Gene3D G3DSA:3.40.1280.10 1 153 1.8E-61 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_2407 b6733490ca153d1d54e1558e52eb7d46 154 SUPERFAMILY SSF75217 2 152 1.96E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_2407 b6733490ca153d1d54e1558e52eb7d46 154 Pfam PF00588 SpoU rRNA Methylase family 3 141 6.0E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Pfam PF04545 Sigma-70, region 4 180 229 1.7E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 SUPERFAMILY SSF88946 6 83 2.09E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Gene3D G3DSA:1.10.1740.10 2 80 3.3E-31 T 11-10-2018 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Gene3D G3DSA:1.20.140.160 82 233 2.3E-44 T 11-10-2018 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 231 7.3E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 201 227 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 PRINTS PR00046 Major sigma-70 factor signature 184 196 1.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 PRINTS PR00046 Major sigma-70 factor signature 38 51 1.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 PRINTS PR00046 Major sigma-70 factor signature 201 216 1.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 PRINTS PR00046 Major sigma-70 factor signature 216 227 1.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 SUPERFAMILY SSF88659 84 155 1.61E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 1 234 61.858 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Pfam PF04539 Sigma-70 region 3 91 150 1.3E-12 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 PIRSF PIRSF000770 1 233 1.0E-38 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 SUPERFAMILY SSF88659 143 231 3.18E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 12 232 2.8E-84 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 38 51 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1180 3f65b111f1ccc96b08c76d7d8ba29f0c 236 Pfam PF04542 Sigma-70 region 2 12 83 1.5E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0421 b5370d217db6dba37a82201a25aea268 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 117 8.7E-34 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0421 b5370d217db6dba37a82201a25aea268 117 SUPERFAMILY SSF53137 4 115 9.16E-49 T 11-10-2018 Tbd_0421 b5370d217db6dba37a82201a25aea268 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 24.674 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0421 b5370d217db6dba37a82201a25aea268 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 2 117 2.7E-35 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0421 b5370d217db6dba37a82201a25aea268 117 Gene3D G3DSA:3.30.420.100 1 117 8.2E-41 T 11-10-2018 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 SUPERFAMILY SSF46557 3 78 6.8E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.2E-58 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 SUPERFAMILY SSF54534 83 157 5.1E-24 T 11-10-2018 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 Gene3D G3DSA:3.10.50.30 76 157 8.0E-29 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 Gene3D G3DSA:1.10.287.180 1 75 6.9E-32 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.709 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 8.3E-29 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 PIRSF PIRSF006092 1 158 2.1E-54 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tbd_1129 b464ae843c6faf0123fc8169c0c6d321 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.1E-33 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 SUPERFAMILY SSF55874 253 410 3.27E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 386 3.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 3.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 405 3.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 407 2.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 SMART SM00387 294 408 5.2E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 247 3.0E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 SUPERFAMILY SSF47384 180 247 9.61E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 Gene3D G3DSA:3.30.565.10 256 407 6.0E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 SMART SM00388 184 250 3.5E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2279 2bfb6ee0aef9c9859aa85be86d4f7d5f 447 Gene3D G3DSA:1.10.287.130 178 247 5.7E-15 T 11-10-2018 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 104 115 - T 11-10-2018 IPR018215 ClpP, Ser active site Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 16 205 3.2E-108 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 SUPERFAMILY SSF52096 25 208 1.43E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 Gene3D G3DSA:3.90.226.10 7 210 8.2E-84 T 11-10-2018 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 126 139 - T 11-10-2018 IPR033135 ClpP, histidine active site Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 PRINTS PR00127 Clp protease catalytic subunit P signature 33 48 1.5E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 PRINTS PR00127 Clp protease catalytic subunit P signature 73 93 1.5E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 PRINTS PR00127 Clp protease catalytic subunit P signature 125 144 1.5E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 1.5E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 PRINTS PR00127 Clp protease catalytic subunit P signature 104 121 1.5E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 Pfam PF00574 Clp protease 27 206 1.1E-88 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tbd_1677 353bf2d8896922151afc4bb5b9df4e9e 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 17 207 44.423 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 Pfam PF02954 Bacterial regulatory protein, Fis family 36 75 5.3E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 SUPERFAMILY SSF46689 10 77 4.93E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 PIRSF PIRSF002097 1 78 2.0E-32 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 Gene3D G3DSA:1.10.10.60 1 77 3.0E-25 T 11-10-2018 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 41 58 2.8E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2457 267f5ccb43bf4fbdbd2662a2423574e2 79 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 58 78 2.8E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2137 841adc79154e079d71c21cf23f1bb42e 325 Gene3D G3DSA:3.40.50.1820 53 304 1.6E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2137 841adc79154e079d71c21cf23f1bb42e 325 SUPERFAMILY SSF53474 26 303 1.52E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2137 841adc79154e079d71c21cf23f1bb42e 325 Pfam PF00561 alpha/beta hydrolase fold 61 304 8.6E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_2137 841adc79154e079d71c21cf23f1bb42e 325 PIRSF PIRSF005211 4 324 5.2E-107 T 11-10-2018 IPR012020 AB hydrolase 4 family Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 SUPERFAMILY SSF51735 1 157 9.87E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 128 1.0E-22 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 SUPERFAMILY SSF55021 352 422 3.44E-12 T 11-10-2018 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 SUPERFAMILY SSF55347 136 301 1.11E-53 T 11-10-2018 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 PIRSF PIRSF000098 1 434 5.0E-167 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Gene3D G3DSA:3.30.70.260 348 422 4.2E-177 T 11-10-2018 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Gene3D G3DSA:3.40.50.720 4 339 4.2E-177 T 11-10-2018 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Pfam PF00742 Homoserine dehydrogenase 136 314 1.6E-65 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Pfam PF01842 ACT domain 353 420 9.9E-13 T 11-10-2018 IPR002912 ACT domain Tbd_0843 185403ec192d721edf8d0ce8ee82d988 437 Gene3D G3DSA:3.30.360.10 135 347 4.2E-177 T 11-10-2018 Tbd_0335 168805806c2be0c4be4e2eca5947de69 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 293 19.213 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Tbd_0335 168805806c2be0c4be4e2eca5947de69 298 Pfam PF01040 UbiA prenyltransferase family 29 274 9.1E-60 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Tbd_0335 168805806c2be0c4be4e2eca5947de69 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 15 292 1.2E-95 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Tbd_0335 168805806c2be0c4be4e2eca5947de69 298 Gene3D G3DSA:1.10.357.140 20 191 3.1E-16 T 11-10-2018 Tbd_0335 168805806c2be0c4be4e2eca5947de69 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site Tbd_0100 6d40e58108609551b1639a5e27760604 546 Gene3D G3DSA:3.30.450.40 385 545 6.5E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_0100 6d40e58108609551b1639a5e27760604 546 SUPERFAMILY SSF109604 29 302 2.51E-47 T 11-10-2018 Tbd_0100 6d40e58108609551b1639a5e27760604 546 Pfam PF13185 GAF domain 398 542 8.8E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_0100 6d40e58108609551b1639a5e27760604 546 SUPERFAMILY SSF55781 399 544 1.82E-12 T 11-10-2018 Tbd_0100 6d40e58108609551b1639a5e27760604 546 Pfam PF08668 HDOD domain 40 230 1.3E-34 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_0100 6d40e58108609551b1639a5e27760604 546 Gene3D G3DSA:1.10.3210.10 31 308 4.5E-50 T 11-10-2018 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 SUPERFAMILY SSF46894 156 219 2.82E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 SMART SM00421 160 217 2.6E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 SUPERFAMILY SSF52172 11 136 4.41E-23 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 SMART SM00448 11 125 3.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 4.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 4.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 4.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 214 1.8E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 Pfam PF00072 Response regulator receiver domain 14 125 1.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2570 746860dc0674e1ad85bcc56270a20b7f 224 Gene3D G3DSA:3.40.50.12740 11 220 6.2E-47 T 11-10-2018 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 SUPERFAMILY SSF54211 3 124 3.34E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0126 9c44641c5505558849da02f8f32124b3 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 47.228 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 296 1.1E-124 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 Gene3D G3DSA:3.30.230.20 1 127 1.6E-49 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 Gene3D G3DSA:3.30.1700.10 128 302 7.8E-70 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.8E-111 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Tbd_0126 9c44641c5505558849da02f8f32124b3 304 SUPERFAMILY SSF54211 133 276 3.34E-54 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 SMART SM00448 184 309 8.6E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 Pfam PF01584 CheW-like domain 21 161 4.7E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 Gene3D G3DSA:2.30.30.40 34 152 4.6E-22 T 11-10-2018 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 SUPERFAMILY SSF50341 17 162 3.4E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 PIRSF PIRSF002867 1 317 2.1E-99 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 Gene3D G3DSA:2.40.50.180 43 158 4.6E-22 T 11-10-2018 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 SUPERFAMILY SSF52172 183 314 2.99E-23 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 Gene3D G3DSA:3.40.50.2300 177 315 2.5E-24 T 11-10-2018 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 Pfam PF00072 Response regulator receiver domain 186 305 2.4E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1598 fd9177d2dc9fda6686f6edbcf096d03e 317 SMART SM00260 17 158 1.9E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_0474 5661c38cc99ebcc09b96cfd7a51bd441 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 4.6E-78 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Tbd_0474 5661c38cc99ebcc09b96cfd7a51bd441 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 8.9E-34 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 Tbd_0474 5661c38cc99ebcc09b96cfd7a51bd441 288 Pfam PF03755 YicC-like family, N-terminal region 3 154 9.4E-39 T 11-10-2018 IPR013527 YicC-like, N-terminal Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 366 434 1.6E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Gene3D G3DSA:1.10.8.60 288 359 7.6E-23 T 11-10-2018 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 219 233 8.6E-50 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 253 280 8.6E-50 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 415 434 8.6E-50 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 187 201 8.6E-50 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 155 175 8.6E-50 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 SMART SM00382 154 345 2.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Gene3D G3DSA:1.10.1750.10 364 456 8.0E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 ProSitePatterns PS01008 DnaA protein signature. 415 434 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 SUPERFAMILY SSF48295 353 455 2.14E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 12 456 31.867 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Gene3D G3DSA:3.40.50.300 121 287 5.4E-48 T 11-10-2018 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 SMART SM00760 365 434 3.9E-43 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 15 454 3.0E-174 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 SUPERFAMILY SSF52540 122 333 1.3E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Pfam PF11638 DnaA N-terminal domain 13 73 6.6E-18 T 11-10-2018 IPR024633 DnaA N-terminal domain Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Gene3D G3DSA:3.30.300.180 12 117 2.7E-23 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily Tbd_0001 f5f230b575d72951a3daed43e30eb0ba 457 Pfam PF00308 Bacterial dnaA protein 123 339 4.8E-89 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 Gene3D G3DSA:1.10.340.30 21 132 3.5E-74 T 11-10-2018 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 Pfam PF00633 Helix-hairpin-helix motif 100 127 7.1E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 SMART SM00525 186 206 0.001 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 165 2.1E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 SMART SM00478 38 185 5.8E-54 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 PIRSF PIRSF001435 1 210 1.9E-49 T 11-10-2018 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.0E-81 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 Gene3D G3DSA:1.10.1670.10 11 203 3.5E-74 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 SUPERFAMILY SSF48150 3 212 2.36E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tbd_2021 0a9db09e84d2a086e07d21e9f6678b8d 229 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.855 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Tbd_0825 8b1171f0c33a27048cb340e91bbf5f1d 674 SUPERFAMILY SSF53300 480 661 4.04E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0825 8b1171f0c33a27048cb340e91bbf5f1d 674 Gene3D G3DSA:3.40.50.410 479 666 7.7E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0825 8b1171f0c33a27048cb340e91bbf5f1d 674 SMART SM00327 479 663 3.4E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_0666 4724796a345d286a2387404b9c55370b 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.472 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 Gene3D G3DSA:3.60.150.10 1 362 1.9E-145 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 PIRSF PIRSF001456 3 358 1.2E-131 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 SUPERFAMILY SSF103263 4 351 5.23E-142 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.6E-132 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 Pfam PF01264 Chorismate synthase 10 345 4.2E-131 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0666 4724796a345d286a2387404b9c55370b 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tbd_0338 7e41b01f528225c01094ba706bfeb363 484 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 472 3.4E-223 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Tbd_0338 7e41b01f528225c01094ba706bfeb363 484 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 208 263 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0338 7e41b01f528225c01094ba706bfeb363 484 Gene3D G3DSA:1.20.210.10 5 478 4.4E-198 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0338 7e41b01f528225c01094ba706bfeb363 484 SUPERFAMILY SSF81442 12 470 8.9E-127 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0338 7e41b01f528225c01094ba706bfeb363 484 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 446 1.4E-119 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 18 29 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 12 469 9.1E-171 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 3.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 3.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 3.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 3.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 3.4E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 SUPERFAMILY SSF52374 12 310 2.01E-112 T 11-10-2018 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 Gene3D G3DSA:1.10.8.70 395 472 3.6E-10 T 11-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 Gene3D G3DSA:1.10.8.70 328 394 2.3E-12 T 11-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 11 472 31.723 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 Gene3D G3DSA:3.40.50.620 11 327 4.5E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 SUPERFAMILY SSF48163 312 472 1.07E-38 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tbd_1734 b01c41806d00f978ce4bfc6e779b95df 472 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 318 1.2E-107 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.2E-134 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 Pfam PF01063 Amino-transferase class IV 36 266 8.7E-57 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 SUPERFAMILY SSF56752 1 303 4.58E-105 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 Gene3D G3DSA:3.20.10.10 131 303 1.7E-55 T 11-10-2018 Tbd_2134 7499cf5c867a7fca2340bfc5dbb650ad 307 Gene3D G3DSA:3.30.470.10 2 130 3.0E-40 T 11-10-2018 Tbd_0917 602f8db4f1154ed6dfee5bffe59790dd 121 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 43 119 2.9E-26 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX Tbd_0917 602f8db4f1154ed6dfee5bffe59790dd 121 SUPERFAMILY SSF46626 10 121 1.25E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0917 602f8db4f1154ed6dfee5bffe59790dd 121 Gene3D G3DSA:1.10.760.10 10 121 7.4E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0917 602f8db4f1154ed6dfee5bffe59790dd 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 44 118 2.6E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 Gene3D G3DSA:3.40.50.300 12 258 8.6E-66 T 11-10-2018 Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 14 260 4.1E-119 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 SMART SM00382 38 241 3.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 SUPERFAMILY SSF52540 12 246 2.01E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1139 c1dd87293e2a3710edbec94812c6d6ab 260 Pfam PF00005 ABC transporter 29 185 2.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Pfam PF01479 S4 domain 336 380 8.0E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 6.6E-119 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.6E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 158 173 1.6E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 208 220 1.6E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 175 197 1.6E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 SMART SM00363 334 396 2.4E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 SUPERFAMILY SSF55174 318 395 1.7E-17 T 11-10-2018 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 395 46.917 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 SUPERFAMILY SSF52374 3 313 2.48E-95 T 11-10-2018 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Gene3D G3DSA:3.40.50.620 2 214 1.6E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Gene3D G3DSA:3.10.290.10 324 395 1.9E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Gene3D G3DSA:1.10.240.10 215 323 4.3E-29 T 11-10-2018 Tbd_0459 e9a84ef49af93cdc8ce88ff7424452e2 396 Pfam PF00579 tRNA synthetases class I (W and Y) 28 314 1.2E-72 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 SUPERFAMILY SSF52402 1 147 8.12E-35 T 11-10-2018 Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 PRINTS PR01438 Universal stress protein signature 107 119 1.7E-17 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 PRINTS PR01438 Universal stress protein signature 2 20 1.7E-17 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 PRINTS PR01438 Universal stress protein signature 125 147 1.7E-17 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 Gene3D G3DSA:3.40.50.620 1 148 7.0E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2036 024e6b2c83787245c32b74f9a757751b 155 Pfam PF00582 Universal stress protein family 1 147 7.5E-32 T 11-10-2018 IPR006016 UspA Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:3.50.50.60 124 250 4.6E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 290 1.7E-54 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 SUPERFAMILY SSF56014 642 806 4.19E-52 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:3.90.480.10 580 644 1.0E-6 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 SUPERFAMILY SSF55124 531 650 9.32E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 688 704 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 15 803 3.7E-291 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:1.10.10.1100 430 484 1.6E-10 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 480 7.9E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Pfam PF04324 BFD-like [2Fe-2S] binding domain 496 546 1.1E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:3.30.413.10 645 796 5.7E-37 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:3.30.390.30 327 401 3.7E-6 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 1.1E-12 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 290 1.1E-12 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 1.1E-12 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 1.1E-12 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Gene3D G3DSA:3.50.50.60 16 299 4.6E-95 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 571 633 3.2E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 SUPERFAMILY SSF51905 153 320 8.37E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PIRSF PIRSF037149 7 818 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.1E-20 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.1E-20 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.1E-20 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 4.1E-20 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 4.1E-20 T 11-10-2018 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 SUPERFAMILY SSF51905 11 201 4.54E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 641 776 8.1E-28 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00397 Sirohaem Fe-binding site signature 688 706 9.9E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2309 d203bfe49c5290b50e5bfb121ed619b2 818 PRINTS PR00397 Sirohaem Fe-binding site signature 645 663 9.9E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 170 181 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 PIRSF PIRSF037901 10 606 8.7E-281 T 11-10-2018 IPR017315 Peptidase S8A, subtilisin-related, proteobacteria-2 Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 SUPERFAMILY SSF52743 148 420 9.43E-80 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 Pfam PF12245 Bacterial Ig-like domain (group 3) 487 512 2.7E-5 T 11-10-2018 IPR022038 Bacterial Ig-like domain Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 207 217 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 165 184 7.1E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 356 372 7.1E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 PRINTS PR00723 Subtilisin serine protease family (S8) signature 203 216 7.1E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 357 367 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 Gene3D G3DSA:3.40.50.200 108 420 2.4E-85 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 Gene3D G3DSA:2.60.40.10 428 517 1.2E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 Gene3D G3DSA:2.60.40.10 519 606 2.0E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0507 b7c103dc7286d175acd31cf02c1aecab 606 Pfam PF00082 Subtilase family 165 403 2.9E-40 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Tbd_0297 8f4ff7761266ca6ba623b42c00ec7e8a 428 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 406 8.7E-198 T 11-10-2018 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related Tbd_0297 8f4ff7761266ca6ba623b42c00ec7e8a 428 Pfam PF04932 O-Antigen ligase 200 337 7.7E-21 T 11-10-2018 IPR007016 O-antigen ligase-related Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 Gene3D G3DSA:3.40.220.10 8 167 3.1E-53 T 11-10-2018 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 SUPERFAMILY SSF52949 8 191 3.77E-50 T 11-10-2018 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 PRINTS PR00481 Cytosol aminopeptidase signature 291 312 2.9E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 PRINTS PR00481 Cytosol aminopeptidase signature 350 370 2.9E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 PRINTS PR00481 Cytosol aminopeptidase signature 328 349 2.9E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 PRINTS PR00481 Cytosol aminopeptidase signature 378 393 2.9E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 PRINTS PR00481 Cytosol aminopeptidase signature 269 286 2.9E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 10 502 38.812 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 SUPERFAMILY SSF53187 186 500 6.28E-120 T 11-10-2018 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 193 494 9.2E-121 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 Gene3D G3DSA:3.40.630.10 188 502 6.0E-133 T 11-10-2018 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 26 153 1.0E-34 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tbd_0580 9bc97f6d65aa72713b0c239ec0bf9895 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 354 361 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tbd_2697 8003ab5c9157f53449d09b2bc5019277 437 Pfam PF02321 Outer membrane efflux protein 232 417 1.7E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2697 8003ab5c9157f53449d09b2bc5019277 437 Pfam PF02321 Outer membrane efflux protein 24 209 3.6E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2697 8003ab5c9157f53449d09b2bc5019277 437 Gene3D G3DSA:1.20.1600.10 21 436 7.4E-108 T 11-10-2018 Tbd_2697 8003ab5c9157f53449d09b2bc5019277 437 SUPERFAMILY SSF56954 4 419 4.71E-85 T 11-10-2018 Tbd_2697 8003ab5c9157f53449d09b2bc5019277 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 430 5.2E-98 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 Pfam PF01795 MraW methylase family 4 305 8.6E-105 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 Gene3D G3DSA:1.10.150.170 109 211 2.4E-102 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 306 38.161 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 SUPERFAMILY SSF53335 5 306 5.15E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 Gene3D G3DSA:3.40.50.150 8 305 2.4E-102 T 11-10-2018 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 SUPERFAMILY SSF81799 111 210 5.49E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 305 6.8E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tbd_0111 4f3c1d34d79849dcbe9fa60b4883c764 311 PIRSF PIRSF004486 1 307 4.6E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 629 33.576 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Gene3D G3DSA:1.20.120.790 499 629 1.7E-50 T 11-10-2018 IPR037196 HSP90, C-terminal domain Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Gene3D G3DSA:3.30.230.80 234 406 4.5E-69 T 11-10-2018 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 185 2.5E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 SUPERFAMILY SSF110942 516 628 2.35E-40 T 11-10-2018 IPR037196 HSP90, C-terminal domain Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 SUPERFAMILY SSF55874 8 218 6.16E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 SMART SM00387 30 187 5.7E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Gene3D G3DSA:3.30.565.10 1 227 5.8E-77 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Gene3D G3DSA:3.40.50.11260 407 498 5.4E-33 T 11-10-2018 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 78 95 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 193 211 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 96 113 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 123 145 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 175 192 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 29 51 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PRINTS PR00775 90kDa heat shock protein signature 8 28 9.1E-62 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 Pfam PF00183 Hsp90 protein 222 629 2.7E-135 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 PIRSF PIRSF002583 1 632 1.9E-218 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Tbd_1078 33fde3fc9ea3894b7b97d1888fa2017d 633 SUPERFAMILY SSF54211 235 490 1.21E-100 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 SUPERFAMILY SSF75620 16 346 2.88E-130 T 11-10-2018 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 SMART SM00937 69 179 1.1E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 349 37.66 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Pfam PF03462 PCRF domain 15 204 2.5E-55 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 8 347 2.5E-153 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Pfam PF00472 RF-1 domain 213 321 1.4E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Gene3D G3DSA:3.30.70.1660 114 342 8.3E-98 T 11-10-2018 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Gene3D G3DSA:1.20.58.410 3 100 5.0E-28 T 11-10-2018 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 Gene3D G3DSA:3.30.160.20 210 305 8.3E-98 T 11-10-2018 Tbd_0921 af986905cad8907d1aeb7b985eaa0d83 349 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 Gene3D G3DSA:3.30.930.10 154 501 7.7E-127 T 11-10-2018 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 497 6.6E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 2.0E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 2.0E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 2.0E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 2.0E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 2.0E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 SUPERFAMILY SSF55681 158 498 2.03E-117 T 11-10-2018 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 1.3E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 Gene3D G3DSA:2.40.50.140 12 150 6.4E-41 T 11-10-2018 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 SUPERFAMILY SSF50249 10 151 1.16E-41 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 12 499 1.9E-200 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0893 e449f6f15ed7a59edacbbecb4d351a75 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 18 500 43.933 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Pfam PF01817 Chorismate mutase type II 19 94 1.1E-23 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tbd_0951 515e050434e6f14fbe426702850232bd 365 SUPERFAMILY SSF48600 14 95 4.21E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Gene3D G3DSA:3.40.190.10 100 270 4.5E-56 T 11-10-2018 Tbd_0951 515e050434e6f14fbe426702850232bd 365 SUPERFAMILY SSF55021 267 361 2.62E-25 T 11-10-2018 Tbd_0951 515e050434e6f14fbe426702850232bd 365 SMART SM00830 19 96 1.0E-29 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tbd_0951 515e050434e6f14fbe426702850232bd 365 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 248 270 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tbd_0951 515e050434e6f14fbe426702850232bd 365 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 310 317 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tbd_0951 515e050434e6f14fbe426702850232bd 365 PIRSF PIRSF001500 9 365 6.3E-130 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Pfam PF00800 Prephenate dehydratase 98 273 7.4E-59 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tbd_0951 515e050434e6f14fbe426702850232bd 365 TIGRFAM TIGR01807 CM_P2: chorismate mutase 15 86 3.1E-25 T 11-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Tbd_0951 515e050434e6f14fbe426702850232bd 365 SUPERFAMILY SSF53850 97 280 8.58E-55 T 11-10-2018 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Gene3D G3DSA:3.40.190.10 178 262 4.5E-56 T 11-10-2018 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Gene3D G3DSA:3.30.70.260 275 365 2.9E-26 T 11-10-2018 Tbd_0951 515e050434e6f14fbe426702850232bd 365 Pfam PF01842 ACT domain 283 347 2.8E-8 T 11-10-2018 IPR002912 ACT domain Tbd_0951 515e050434e6f14fbe426702850232bd 365 Gene3D G3DSA:1.20.59.10 11 96 3.5E-26 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 462 2.6E-190 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Pfam PF00206 Lyase 14 308 3.5E-77 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 6.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 6.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 6.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 6.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Pfam PF14698 Argininosuccinate lyase C-terminal 371 438 1.9E-25 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Gene3D G3DSA:1.10.40.30 368 440 6.2E-190 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Gene3D G3DSA:1.10.275.10 33 237 6.2E-190 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Gene3D G3DSA:1.20.200.10 127 455 6.2E-190 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 461 43.814 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 SUPERFAMILY SSF48557 12 462 1.24E-156 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 7.8E-69 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 7.8E-69 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 7.8E-69 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 7.8E-69 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 7.8E-69 T 11-10-2018 Tbd_0229 aab2d4d26c2d186501c92ccefabec99d 463 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 7.8E-69 T 11-10-2018 Tbd_2078 3d699424733d01e9ded993eb46362d4c 106 Pfam PF02699 Preprotein translocase subunit 21 95 3.7E-28 T 11-10-2018 IPR003849 Preprotein translocase YajC Tbd_2078 3d699424733d01e9ded993eb46362d4c 106 PRINTS PR01853 Bacterial YajC preprotein translocase signature 18 38 3.6E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Tbd_2078 3d699424733d01e9ded993eb46362d4c 106 PRINTS PR01853 Bacterial YajC preprotein translocase signature 38 56 3.6E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Tbd_2078 3d699424733d01e9ded993eb46362d4c 106 SMART SM01323 16 98 6.9E-40 T 11-10-2018 IPR003849 Preprotein translocase YajC Tbd_2078 3d699424733d01e9ded993eb46362d4c 106 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 98 3.6E-28 T 11-10-2018 IPR003849 Preprotein translocase YajC Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 475 1.2E-40 T 11-10-2018 IPR000160 GGDEF domain Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SUPERFAMILY SSF141868 494 742 1.14E-86 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SMART SM00062 27 250 4.5E-34 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SMART SM00052 487 735 1.6E-112 T 11-10-2018 IPR001633 EAL domain Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Gene3D G3DSA:3.20.20.450 491 758 3.2E-108 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Gene3D G3DSA:3.40.190.10 111 205 5.4E-29 T 11-10-2018 Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Pfam PF00990 Diguanylate cyclase, GGDEF domain 316 473 3.8E-47 T 11-10-2018 IPR000160 GGDEF domain Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SUPERFAMILY SSF53850 24 246 6.85E-35 T 11-10-2018 Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SMART SM00267 305 477 1.2E-65 T 11-10-2018 IPR000160 GGDEF domain Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 235 1.2E-27 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 SUPERFAMILY SSF55073 321 478 1.26E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Gene3D G3DSA:3.40.190.10 35 235 5.4E-29 T 11-10-2018 Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Gene3D G3DSA:3.30.70.270 310 490 2.5E-58 T 11-10-2018 Tbd_1265 a50334ffd80fb7fcbabba0ac2ce92088 758 Pfam PF00563 EAL domain 494 730 9.0E-79 T 11-10-2018 IPR001633 EAL domain Tbd_1181 719c368de7931b7bafccd93161f07053 407 PIRSF PIRSF000106 38 406 1.3E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tbd_1181 719c368de7931b7bafccd93161f07053 407 Gene3D G3DSA:3.40.50.720 162 407 3.5E-78 T 11-10-2018 Tbd_1181 719c368de7931b7bafccd93161f07053 407 SMART SM01274 19 152 1.0E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tbd_1181 719c368de7931b7bafccd93161f07053 407 SMART SM00919 164 400 1.1E-134 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tbd_1181 719c368de7931b7bafccd93161f07053 407 SUPERFAMILY SSF53223 11 162 1.94E-53 T 11-10-2018 Tbd_1181 719c368de7931b7bafccd93161f07053 407 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 2.7E-27 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tbd_1181 719c368de7931b7bafccd93161f07053 407 SUPERFAMILY SSF51735 164 401 9.1E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1181 719c368de7931b7bafccd93161f07053 407 Gene3D G3DSA:3.40.50.10380 1 161 2.5E-68 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Tbd_1181 719c368de7931b7bafccd93161f07053 407 Pfam PF03949 Malic enzyme, NAD binding domain 166 356 2.5E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 Pfam PF02545 Maf-like protein 6 198 3.2E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 PIRSF PIRSF006305 1 203 5.6E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 SUPERFAMILY SSF52972 5 198 4.84E-52 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 197 1.4E-40 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 Hamap MF_00528 Septum formation protein Maf [maf]. 6 203 29.523 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Tbd_2438 5494ca25cdf0f4f4f6b96dbc3b917e17 203 Gene3D G3DSA:3.90.950.10 2 203 8.4E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 SUPERFAMILY SSF56601 225 553 1.43E-95 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 208 4.5E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Gene3D G3DSA:3.30.450.330 225 550 9.9E-116 T 11-10-2018 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Gene3D G3DSA:3.90.1310.30 55 223 6.0E-42 T 11-10-2018 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 SUPERFAMILY SSF56519 57 223 2.49E-40 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Pfam PF00905 Penicillin binding protein transpeptidase domain 249 545 1.8E-79 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Gene3D G3DSA:3.40.710.10 285 467 9.9E-116 T 11-10-2018 Tbd_0113 687818c35d3b3f3dd12b43a6b3c77598 577 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 13 561 41.147 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 SMART SM00382 36 230 4.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 5 225 1.9E-82 T 11-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 Pfam PF00005 ABC transporter 28 182 1.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 SUPERFAMILY SSF52540 4 228 4.15E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2291 3ef6c0530eb34e2700c130d8b9b8c28a 240 Gene3D G3DSA:3.40.50.300 4 234 1.1E-51 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 342 1.7E-44 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 95 115 8.7E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 430 8.7E-7 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 Gene3D G3DSA:2.40.30.170 72 328 2.2E-72 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 Gene3D G3DSA:2.40.50.100 83 249 2.2E-72 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 Gene3D G3DSA:2.40.420.20 68 422 2.2E-72 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 SUPERFAMILY SSF111369 73 325 2.22E-18 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 Gene3D G3DSA:1.10.287.470 117 211 2.2E-72 T 11-10-2018 Tbd_1414 7289ed470ea5536fb241f09c07f57ba4 430 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 320 1.6E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Pfam PF03144 Elongation factor Tu domain 2 207 277 1.3E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 SUPERFAMILY SSF54980 401 495 1.82E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 183 1.6E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 304.802 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Gene3D G3DSA:3.30.70.2570 481 555 3.5E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 178 2.9E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 SUPERFAMILY SSF54980 296 372 2.52E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 5.0E-48 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Gene3D G3DSA:3.40.50.300 2 187 6.1E-71 T 11-10-2018 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 SMART SM00838 400 487 0.0031 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 PRINTS PR00315 GTP-binding elongation factor signature 128 137 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 PRINTS PR00315 GTP-binding elongation factor signature 76 86 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 PRINTS PR00315 GTP-binding elongation factor signature 92 103 2.0E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Gene3D G3DSA:3.30.70.870 288 369 2.9E-35 T 11-10-2018 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Pfam PF00679 Elongation factor G C-terminus 401 486 1.7E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 SUPERFAMILY SSF50447 167 290 1.75E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 SUPERFAMILY SSF52540 5 207 7.34E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 596 5.2E-300 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Gene3D G3DSA:2.40.30.10 188 287 3.8E-34 T 11-10-2018 Tbd_2089 9eec1c00268d01284fac2bce34be4635 599 Gene3D G3DSA:3.30.70.3380 370 480 4.9E-44 T 11-10-2018 Tbd_0461 981dac1f19ccc81456de057591362a54 244 Pfam PF03309 Type III pantothenate kinase 6 191 1.8E-47 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tbd_0461 981dac1f19ccc81456de057591362a54 244 Hamap MF_01274 Type III pantothenate kinase [coaX]. 4 242 16.984 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tbd_0461 981dac1f19ccc81456de057591362a54 244 SUPERFAMILY SSF53067 6 110 2.37E-23 T 11-10-2018 Tbd_0461 981dac1f19ccc81456de057591362a54 244 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 238 7.3E-27 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tbd_0461 981dac1f19ccc81456de057591362a54 244 SUPERFAMILY SSF53067 114 238 1.64E-25 T 11-10-2018 Tbd_0461 981dac1f19ccc81456de057591362a54 244 Gene3D G3DSA:3.30.420.490 115 230 1.9E-63 T 11-10-2018 Tbd_0461 981dac1f19ccc81456de057591362a54 244 Gene3D G3DSA:3.30.420.40 7 234 1.9E-63 T 11-10-2018 Tbd_1032 7d05c2a57adf6981bfd812061aec12f0 132 SUPERFAMILY SSF101874 1 118 6.8E-32 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1032 7d05c2a57adf6981bfd812061aec12f0 132 Gene3D G3DSA:2.40.128.110 1 120 1.0E-28 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1032 7d05c2a57adf6981bfd812061aec12f0 132 Pfam PF04264 YceI-like domain 1 115 2.3E-24 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1032 7d05c2a57adf6981bfd812061aec12f0 132 SMART SM00867 1 117 5.8E-6 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_2748 7228a8ffd903e73bce8fca3c01ac8782 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 25 301 5.8E-12 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tbd_2748 7228a8ffd903e73bce8fca3c01ac8782 310 PIRSF PIRSF028561 7 308 8.3E-114 T 11-10-2018 IPR014548 Predicted acyltransferase Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 14 531 5.7E-202 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 369 456 1.3E-22 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 279 368 4.4E-28 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 223 244 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 301 320 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 32 50 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 50 64 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 95 114 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 119 135 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 341 359 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 137 154 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PRINTS PR00681 Ribosomal protein S1 signature 166 186 2.0E-81 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 440 542 7.55E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 114 195 2.61E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 266 365 1.65E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 200 288 9.61E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 30 89 6.9E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 200 271 1.2E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 372 445 1.4E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 459 531 1.9E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 114 182 9.7E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Pfam PF00575 S1 RNA binding domain 287 358 7.7E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 457 538 4.4E-21 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 198 278 3.3E-28 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 PIRSF PIRSF002111 1 545 9.3E-211 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 201 271 4.7E-30 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 373 445 4.8E-20 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 30 98 0.03 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 114 182 4.9E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 286 358 1.8E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SMART SM00316 460 531 1.2E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 353 451 7.31E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 SUPERFAMILY SSF50249 16 123 7.55E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 111 192 6.7E-6 T 11-10-2018 Tbd_0956 85156a37969f8611b906b78d4aa89eb5 573 Gene3D G3DSA:2.40.50.140 17 110 2.5E-15 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SUPERFAMILY SSF48452 265 433 5.96E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 632 760 1.5E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SUPERFAMILY SSF48452 689 914 9.87E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 365 510 3.2E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SUPERFAMILY SSF48452 446 700 1.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 203 236 8.0E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 32 65 75.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 135 168 4.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 576 609 300.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 305 338 45.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 644 677 0.16 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 474 507 25.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 712 745 48.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 169 202 60.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 271 304 1.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 407 440 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 780 813 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 847 880 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 610 643 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 881 914 420.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 66 99 370.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 814 846 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SMART SM00028 373 406 0.0088 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF13181 Tetratricopeptide repeat 474 505 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 35 118 3.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF13432 Tetratricopeptide repeat 787 847 5.1E-6 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF13432 Tetratricopeptide repeat 582 640 3.9E-5 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF13432 Tetratricopeptide repeat 38 94 0.0087 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 10 908 2.1E-243 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF14559 Tetratricopeptide repeat 384 447 3.6E-8 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF14559 Tetratricopeptide repeat 857 919 4.2E-7 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF14559 Tetratricopeptide repeat 216 279 2.9E-8 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Pfam PF14559 Tetratricopeptide repeat 145 204 7.1E-8 T 11-10-2018 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 511 631 2.6E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 761 929 1.1E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SUPERFAMILY SSF48452 137 305 2.66E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 SUPERFAMILY SSF48452 32 118 8.54E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0195 2dc9b0a215d0c089fc50c8a946f4a37b 931 Gene3D G3DSA:1.25.40.10 130 364 2.3E-41 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0645 70c75fa9059b2153413843b68355105d 337 PIRSF PIRSF000164 17 337 2.5E-90 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Tbd_0645 70c75fa9059b2153413843b68355105d 337 Pfam PF01180 Dihydroorotate dehydrogenase 46 335 1.5E-86 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tbd_0645 70c75fa9059b2153413843b68355105d 337 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 8.1E-129 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Tbd_0645 70c75fa9059b2153413843b68355105d 337 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 291 311 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Tbd_0645 70c75fa9059b2153413843b68355105d 337 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Tbd_0645 70c75fa9059b2153413843b68355105d 337 SUPERFAMILY SSF51395 1 335 1.36E-103 T 11-10-2018 Tbd_0645 70c75fa9059b2153413843b68355105d 337 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 335 50.663 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Tbd_0645 70c75fa9059b2153413843b68355105d 337 Gene3D G3DSA:3.20.20.70 2 335 1.7E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 PIRSF PIRSF000728 11 292 3.5E-103 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 SUPERFAMILY SSF53633 5 292 9.16E-91 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 285 48.938 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 267 6.8E-75 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 Gene3D G3DSA:3.40.1160.10 3 293 4.8E-97 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_2686 6ac0e020398df3ef1b0770c527acff72 293 Pfam PF00696 Amino acid kinase family 26 269 1.2E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Gene3D G3DSA:3.30.2350.10 1 238 4.7E-88 T 11-10-2018 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 30 177 1.2E-54 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 239 293 6.1E-16 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 SUPERFAMILY SSF88697 238 294 7.95E-8 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 235 3.0E-14 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 SUPERFAMILY SSF55120 8 238 6.04E-81 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 8 216 2.7E-78 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 293 18.521 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0695 6865c715a718e962a8c11c704ce9c99b 298 Gene3D G3DSA:2.30.130.10 239 298 1.9E-8 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Gene3D G3DSA:3.30.70.870 312 595 6.1E-131 T 11-10-2018 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Gene3D G3DSA:2.40.30.10 206 305 2.4E-31 T 11-10-2018 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Pfam PF00009 Elongation factor Tu GTP binding domain 4 201 1.6E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 139 1.1E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 SUPERFAMILY SSF54980 308 393 1.51E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Pfam PF00679 Elongation factor G C-terminus 402 485 1.5E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 SMART SM00838 404 489 0.0022 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Gene3D G3DSA:2.40.50.250 488 604 6.1E-131 T 11-10-2018 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 SUPERFAMILY SSF54980 404 518 6.23E-32 T 11-10-2018 IPR035647 EF-G domain III/V-like Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Gene3D G3DSA:3.40.50.300 2 204 2.2E-64 T 11-10-2018 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 SUPERFAMILY SSF50447 151 305 4.78E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Pfam PF03144 Elongation factor Tu domain 2 225 295 8.2E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.3E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 604 6.4E-296 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 Gene3D G3DSA:3.30.70.240 395 487 6.1E-131 T 11-10-2018 Tbd_0772 7b9609d6ac98ccd950fedfb84a8f9c15 610 SUPERFAMILY SSF52540 3 212 1.59E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 SMART SM00464 30 225 1.5E-34 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 SUPERFAMILY SSF88697 30 224 1.99E-22 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Hamap MF_01973 Lon protease [lon]. 31 794 61.675 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PIRSF PIRSF001174 19 796 6.5E-283 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 30 225 3.3E-30 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Gene3D G3DSA:1.20.58.1480 142 267 1.1E-32 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Gene3D G3DSA:3.30.230.10 610 797 2.7E-73 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 SUPERFAMILY SSF52540 335 610 7.14E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Gene3D G3DSA:1.10.8.60 515 607 3.5E-26 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 SMART SM00382 372 516 8.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 TIGRFAM TIGR00763 lon: endopeptidase La 33 793 5.6E-285 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Gene3D G3DSA:3.40.50.300 337 514 3.9E-62 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 376 513 5.2E-21 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 593 792 6.0E-74 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 Gene3D G3DSA:2.30.130.40 27 136 5.5E-17 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 698 706 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 SUPERFAMILY SSF54211 616 793 3.49E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 380 399 9.7E-52 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 744 9.7E-52 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 748 766 9.7E-52 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 695 714 9.7E-52 T 11-10-2018 Tbd_1252 fed192a9e0102a1e0feb8e3de010033e 797 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 616 632 9.7E-52 T 11-10-2018 Tbd_1031 dd80a74ba56692e5eef781574d41270a 196 SMART SM00867 25 188 1.3E-63 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1031 dd80a74ba56692e5eef781574d41270a 196 Pfam PF04264 YceI-like domain 26 187 8.8E-36 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1031 dd80a74ba56692e5eef781574d41270a 196 Gene3D G3DSA:2.40.128.110 24 190 1.1E-46 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1031 dd80a74ba56692e5eef781574d41270a 196 SUPERFAMILY SSF101874 25 190 7.72E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_2301 573487564ca436efe125ba74c5813729 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 7.5E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_2301 573487564ca436efe125ba74c5813729 242 Pfam PF07702 UTRA domain 98 236 3.9E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tbd_2301 573487564ca436efe125ba74c5813729 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.6E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_2301 573487564ca436efe125ba74c5813729 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.6E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_2301 573487564ca436efe125ba74c5813729 242 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 7 240 2.6E-63 T 11-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF Tbd_2301 573487564ca436efe125ba74c5813729 242 SUPERFAMILY SSF64288 64 240 8.32E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tbd_2301 573487564ca436efe125ba74c5813729 242 Gene3D G3DSA:1.10.10.10 12 76 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2301 573487564ca436efe125ba74c5813729 242 SUPERFAMILY SSF46785 8 80 5.96E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2301 573487564ca436efe125ba74c5813729 242 SMART SM00866 97 237 1.9E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tbd_2301 573487564ca436efe125ba74c5813729 242 Gene3D G3DSA:3.40.1410.10 85 241 3.8E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tbd_2301 573487564ca436efe125ba74c5813729 242 SMART SM00345 18 76 5.7E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_0540 6e781717ce4821fc9827ad0c68b4cafb 218 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0540 6e781717ce4821fc9827ad0c68b4cafb 218 SUPERFAMILY SSF54523 13 96 1.18E-7 T 11-10-2018 Tbd_0540 6e781717ce4821fc9827ad0c68b4cafb 218 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0540 6e781717ce4821fc9827ad0c68b4cafb 218 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 1.7E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0207 14d9495a7133691746fbf0ad38668322 183 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 Pfam PF01202 Shikimate kinase 13 158 7.8E-53 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.159 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 PRINTS PR01100 Shikimate kinase family signature 59 67 2.9E-24 T 11-10-2018 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 PRINTS PR01100 Shikimate kinase family signature 98 115 2.9E-24 T 11-10-2018 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 PRINTS PR01100 Shikimate kinase family signature 31 44 2.9E-24 T 11-10-2018 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 PRINTS PR01100 Shikimate kinase family signature 77 86 2.9E-24 T 11-10-2018 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 PRINTS PR01100 Shikimate kinase family signature 7 22 2.9E-24 T 11-10-2018 Tbd_0207 14d9495a7133691746fbf0ad38668322 183 SUPERFAMILY SSF52540 7 166 2.21E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0207 14d9495a7133691746fbf0ad38668322 183 Gene3D G3DSA:3.40.50.300 1 169 1.6E-55 T 11-10-2018 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 PRINTS PR00123 ATP synthase A subunit signature 186 201 1.2E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 PRINTS PR00123 ATP synthase A subunit signature 109 125 1.2E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 PRINTS PR00123 ATP synthase A subunit signature 206 228 1.2E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 PRINTS PR00123 ATP synthase A subunit signature 259 274 1.2E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 ProSitePatterns PS00449 ATP synthase a subunit signature. 209 218 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 Pfam PF00119 ATP synthase A chain 52 272 3.1E-55 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 273 4.4E-44 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 Gene3D G3DSA:1.20.120.220 100 279 2.6E-54 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 SUPERFAMILY SSF81336 102 273 2.22E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2803 4a7b472c42a97ce8b843f7830cd93d74 280 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 279 15.335 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 Gene3D G3DSA:3.40.50.300 5 274 4.1E-57 T 11-10-2018 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 SMART SM00382 26 223 1.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 SMART SM00382 347 524 8.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 SUPERFAMILY SSF52540 299 538 2.63E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 SUPERFAMILY SSF52540 2 257 2.5E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 Pfam PF00005 ABC transporter 17 178 1.7E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 Pfam PF12848 ABC transporter 217 295 6.6E-30 T 11-10-2018 IPR032781 ABC-transporter extension domain Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 Pfam PF00005 ABC transporter 339 480 7.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2351 6e31fdfeecfcffd116996946b2883e2a 650 Gene3D G3DSA:3.40.50.300 276 559 1.8E-52 T 11-10-2018 Tbd_2702 49c773fd387d3dc4523fa59d19da95ee 384 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 91 312 1.7E-47 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Tbd_2702 49c773fd387d3dc4523fa59d19da95ee 384 SUPERFAMILY SSF53335 27 376 3.89E-91 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2702 49c773fd387d3dc4523fa59d19da95ee 384 Gene3D G3DSA:3.40.50.12710 4 384 1.1E-127 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 SUPERFAMILY SSF52833 28 134 1.46E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 Pfam PF00085 Thioredoxin 32 131 9.1E-21 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 PRINTS PR00421 Thioredoxin family signature 97 108 5.1E-7 T 11-10-2018 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 PRINTS PR00421 Thioredoxin family signature 47 55 5.1E-7 T 11-10-2018 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 PRINTS PR00421 Thioredoxin family signature 55 64 5.1E-7 T 11-10-2018 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 Gene3D G3DSA:3.40.30.10 24 134 2.3E-26 T 11-10-2018 Tbd_2606 9d2e1cef9cf6ce826bd6168f3291b55e 136 PIRSF PIRSF000077 26 133 1.7E-24 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SUPERFAMILY SSF50249 237 646 8.0E-146 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Pfam PF08206 Ribonuclease B OB domain 104 161 7.6E-23 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Hamap MF_01895 Ribonuclease R [rnr]. 55 729 56.554 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SUPERFAMILY SSF50249 646 733 1.78E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SUPERFAMILY SSF50249 84 164 2.45E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 ProSitePatterns PS01175 Ribonuclease II family signature. 572 596 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 TIGRFAM TIGR02063 RNase_R: ribonuclease R 37 730 4.2E-268 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SMART SM00357 167 229 4.1 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SMART SM00357 103 162 8.9E-14 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Gene3D G3DSA:2.40.50.140 85 165 1.3E-20 T 11-10-2018 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SMART SM00955 277 605 3.1E-184 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 85 729 1.8E-230 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Gene3D G3DSA:2.40.50.140 649 755 7.1E-25 T 11-10-2018 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Pfam PF00575 S1 RNA binding domain 645 728 2.1E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SUPERFAMILY SSF50249 155 254 4.24E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SMART SM00316 97 159 24.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 SMART SM00316 646 729 1.0E-15 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0608 3a851fd611f4a1a8d7895817548a37cd 758 Pfam PF00773 RNB domain 277 604 7.5E-105 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 Gene3D G3DSA:3.30.428.10 1 107 2.5E-38 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 PRINTS PR00332 Histidine triad family signature 93 103 4.3E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 PRINTS PR00332 Histidine triad family signature 5 21 4.3E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 PRINTS PR00332 Histidine triad family signature 26 44 4.3E-20 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 Pfam PF01230 HIT domain 11 105 4.8E-22 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 SUPERFAMILY SSF54197 1 104 1.86E-35 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_1705 eadb4f51475dcfd960c3fe22b74cacc9 112 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 11-10-2018 IPR019808 Histidine triad, conserved site Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 PIRSF PIRSF006092 32 130 4.4E-19 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 PIRSF PIRSF006092 10 25 1900.0 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 SUPERFAMILY SSF54534 51 128 2.62E-13 T 11-10-2018 Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 52 127 3.3E-14 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 Pfam PF14760 Rnk N-terminus 7 45 2.0E-12 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 Gene3D G3DSA:1.10.286.20 2 46 4.4E-11 T 11-10-2018 Tbd_0066 8bd268b0a2a7754da9341873fb7ead31 138 Gene3D G3DSA:3.10.50.30 47 138 2.6E-25 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Tbd_0986 c6685e47789bd6db76e5dd11ad4039f8 236 Gene3D G3DSA:3.30.310.70 92 230 2.7E-7 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_0986 c6685e47789bd6db76e5dd11ad4039f8 236 Pfam PF03625 Domain of unknown function DUF302 142 194 4.9E-9 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_0986 c6685e47789bd6db76e5dd11ad4039f8 236 SUPERFAMILY SSF103247 101 229 1.83E-18 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Pfam PF01938 TRAM domain 392 454 1.0E-17 T 11-10-2018 IPR002792 TRAM domain Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 165 185 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 18 454 3.6E-177 T 11-10-2018 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Gene3D G3DSA:3.80.30.20 159 391 4.3E-82 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Pfam PF04055 Radical SAM superfamily 165 339 6.8E-30 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 SUPERFAMILY SSF102114 143 385 9.03E-59 T 11-10-2018 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 SMART SM00729 161 381 1.5E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 17 455 73.389 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 18 451 9.6E-149 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Gene3D G3DSA:3.40.50.12160 17 150 4.8E-33 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tbd_2706 fcda57bd64332b4e4eee629f71a5da01 461 Pfam PF00919 Uncharacterized protein family UPF0004 18 118 3.9E-29 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tbd_2159 43f4928ad7f378c0ed193f29350669ae 480 Pfam PF08668 HDOD domain 290 398 9.7E-9 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_2159 43f4928ad7f378c0ed193f29350669ae 480 Gene3D G3DSA:1.10.3210.10 265 441 3.2E-19 T 11-10-2018 Tbd_2159 43f4928ad7f378c0ed193f29350669ae 480 SUPERFAMILY SSF109604 257 478 1.63E-34 T 11-10-2018 Tbd_2159 43f4928ad7f378c0ed193f29350669ae 480 SUPERFAMILY SSF141868 175 263 4.18E-5 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_2035 309ae090091ebb1266e0e63291baf441 419 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 1.2E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Tbd_2035 309ae090091ebb1266e0e63291baf441 419 Gene3D G3DSA:3.50.50.60 146 278 8.3E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2035 309ae090091ebb1266e0e63291baf441 419 SUPERFAMILY SSF55424 353 418 2.14E-13 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_2035 309ae090091ebb1266e0e63291baf441 419 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 354 418 2.9E-16 T 11-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Tbd_2035 309ae090091ebb1266e0e63291baf441 419 SUPERFAMILY SSF51905 32 157 1.23E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2035 309ae090091ebb1266e0e63291baf441 419 SUPERFAMILY SSF51905 147 277 1.23E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2035 309ae090091ebb1266e0e63291baf441 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 145 8.4E-13 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2035 309ae090091ebb1266e0e63291baf441 419 Gene3D G3DSA:3.50.50.60 33 340 8.3E-103 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2035 309ae090091ebb1266e0e63291baf441 419 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 25 1.3E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.9E-23 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 SUPERFAMILY SSF46589 12 99 2.3E-19 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 SUPERFAMILY SSF55681 92 344 9.95E-79 T 11-10-2018 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 343 7.5E-104 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 Pfam PF01409 tRNA synthetases class II core domain (F) 92 343 2.7E-105 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 343 49.204 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Tbd_1011 b37d060ec68a1385a53cabdc6ee5569b 344 Gene3D G3DSA:3.30.930.10 8 344 3.2E-117 T 11-10-2018 Tbd_2596 55c52157cd64ccc3e989340db57b5886 405 Gene3D G3DSA:2.40.160.60 24 405 6.7E-138 T 11-10-2018 Tbd_2596 55c52157cd64ccc3e989340db57b5886 405 SUPERFAMILY SSF56935 24 405 4.58E-97 T 11-10-2018 Tbd_2596 55c52157cd64ccc3e989340db57b5886 405 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 405 1.5E-103 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 Gene3D G3DSA:1.10.10.60 419 476 5.2E-22 T 11-10-2018 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.2E-15 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 Pfam PF04963 Sigma-54 factor, core binding domain 117 306 2.6E-56 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 PIRSF PIRSF000774 1 478 1.1E-156 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 476 1.0E-141 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 Gene3D G3DSA:1.10.10.1330 119 245 7.1E-20 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 Pfam PF04552 Sigma-54, DNA binding domain 321 476 4.2E-65 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 PRINTS PR00045 Sigma-54 factor signature 378 390 2.1E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 PRINTS PR00045 Sigma-54 factor signature 394 405 2.1E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 PRINTS PR00045 Sigma-54 factor signature 452 470 2.1E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0533 df9c8c2e000f3b70c07a35506db4c925 478 PRINTS PR00045 Sigma-54 factor signature 189 206 2.1E-31 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 SUPERFAMILY SSF55347 127 236 3.05E-37 T 11-10-2018 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 Gene3D G3DSA:3.30.360.10 127 234 2.8E-101 T 11-10-2018 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 125 1.5E-36 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 PIRSF PIRSF000161 1 267 3.3E-87 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.3E-43 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 Gene3D G3DSA:3.40.50.720 4 263 2.8E-101 T 11-10-2018 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 265 1.7E-95 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 265 35.748 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1125 59486e10dd593041a995b2a6ae15de8a 267 SUPERFAMILY SSF51735 3 266 2.8E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PIRSF PIRSF004557 5 432 1.6E-124 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 Gene3D G3DSA:1.10.3370.10 6 421 1.2E-162 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 Pfam PF00344 SecY translocase 71 409 6.6E-118 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 425 29.911 T 11-10-2018 IPR026593 Protein translocase subunit SecY Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 ProSitePatterns PS00755 Protein secY signature 1. 71 90 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 SUPERFAMILY SSF103491 10 416 2.35E-133 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 111 134 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 70 90 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 394 412 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 362 380 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 264 283 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 307 329 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.1E-98 T 11-10-2018 Tbd_0425 a0245cf3d73d468c4a48fb478be69f40 437 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 421 7.2E-132 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 Gene3D G3DSA:3.30.70.1660 112 342 3.8E-97 T 11-10-2018 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 SMART SM00937 63 178 2.5E-67 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 Pfam PF00472 RF-1 domain 214 321 6.1E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 SUPERFAMILY SSF75620 14 353 2.88E-139 T 11-10-2018 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.481 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 Gene3D G3DSA:3.30.160.20 210 297 3.8E-97 T 11-10-2018 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 4.3E-164 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tbd_2493 f52054eb1300f7bb10d98d54905b800a 360 Pfam PF03462 PCRF domain 14 203 7.6E-74 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tbd_0975 3d167dcc5d36791d2f4492db761adce6 161 Gene3D G3DSA:3.10.50.40 4 150 8.7E-34 T 11-10-2018 Tbd_0975 3d167dcc5d36791d2f4492db761adce6 161 SUPERFAMILY SSF54534 4 140 1.71E-21 T 11-10-2018 Tbd_0975 3d167dcc5d36791d2f4492db761adce6 161 Gene3D G3DSA:2.40.10.330 71 121 8.7E-34 T 11-10-2018 Tbd_1951 89aff415754669d5fabfdb6acb572b57 362 PIRSF PIRSF006004 1 342 9.8E-87 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Tbd_1951 89aff415754669d5fabfdb6acb572b57 362 SUPERFAMILY SSF102114 97 297 2.88E-11 T 11-10-2018 Tbd_1951 89aff415754669d5fabfdb6acb572b57 362 Gene3D G3DSA:3.20.20.70 63 317 1.3E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1951 89aff415754669d5fabfdb6acb572b57 362 Pfam PF04055 Radical SAM superfamily 100 258 4.4E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 3.6E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 SUPERFAMILY SSF50104 1 118 1.5E-45 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 PRINTS PR00061 Ribosomal protein L19 signature 6 35 7.5E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 PRINTS PR00061 Ribosomal protein L19 signature 36 65 7.5E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 PRINTS PR00061 Ribosomal protein L19 signature 90 115 7.5E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 Pfam PF01245 Ribosomal protein L19 2 115 8.9E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 Gene3D G3DSA:2.30.30.790 3 120 1.4E-15 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 30.823 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2376 80f5f0dc086f4eb6667f3b57bdf00539 126 PIRSF PIRSF002191 1 126 2.4E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0947 bad172c619d60507a3f29be7b58bf2e8 441 SUPERFAMILY SSF51338 6 435 6.24E-25 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_0947 bad172c619d60507a3f29be7b58bf2e8 441 Gene3D G3DSA:3.20.20.140 64 354 2.0E-159 T 11-10-2018 Tbd_0947 bad172c619d60507a3f29be7b58bf2e8 441 Pfam PF01979 Amidohydrolase family 61 408 8.9E-69 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tbd_0947 bad172c619d60507a3f29be7b58bf2e8 441 SUPERFAMILY SSF51556 63 362 4.25E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_0947 bad172c619d60507a3f29be7b58bf2e8 441 Gene3D G3DSA:2.30.40.10 12 428 2.0E-159 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 Gene3D G3DSA:3.10.580.10 200 325 3.4E-44 T 11-10-2018 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 SMART SM00116 214 262 0.38 T 11-10-2018 IPR000644 CBS domain Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 SMART SM00116 279 327 4.3E-5 T 11-10-2018 IPR000644 CBS domain Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 PIRSF PIRSF004692 1 328 2.6E-134 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 SUPERFAMILY SSF53697 13 325 6.9E-73 T 11-10-2018 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 Pfam PF00571 CBS domain 273 325 1.3E-8 T 11-10-2018 IPR000644 CBS domain Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 Pfam PF00571 CBS domain 215 262 2.8E-6 T 11-10-2018 IPR000644 CBS domain Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 Gene3D G3DSA:3.40.50.10490 7 199 3.0E-64 T 11-10-2018 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 49 318 5.6E-109 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Tbd_0538 3581a982e5fb7858e53da48d89a0971e 328 Pfam PF01380 SIS domain 45 176 1.8E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tbd_0396 731b4388e301c3ac6d9b0bf485b3c5f8 173 Gene3D G3DSA:3.30.70.1730 4 133 1.8E-33 T 11-10-2018 Tbd_0396 731b4388e301c3ac6d9b0bf485b3c5f8 173 Pfam PF00466 Ribosomal protein L10 5 100 6.0E-23 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Tbd_0396 731b4388e301c3ac6d9b0bf485b3c5f8 173 SUPERFAMILY SSF160369 4 171 6.54E-54 T 11-10-2018 Tbd_0396 731b4388e301c3ac6d9b0bf485b3c5f8 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 25.784 T 11-10-2018 IPR022973 Ribosomal protein L10 Tbd_0541 3cc85d5ae1a58bcc05e3369742d9bece 595 Gene3D G3DSA:3.30.565.10 444 572 4.9E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0541 3cc85d5ae1a58bcc05e3369742d9bece 595 Gene3D G3DSA:1.10.287.130 388 443 4.9E-9 T 11-10-2018 Tbd_0541 3cc85d5ae1a58bcc05e3369742d9bece 595 SUPERFAMILY SSF55874 472 578 1.33E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 365 534 2.2E-56 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Gene3D G3DSA:3.10.400.10 1 143 3.1E-51 T 11-10-2018 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 SUPERFAMILY SSF52540 367 537 1.23E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Pfam PF01747 ATP-sulfurylase 147 360 2.0E-42 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Gene3D G3DSA:3.40.50.300 362 544 4.1E-71 T 11-10-2018 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Gene3D G3DSA:3.40.50.620 144 361 4.2E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Pfam PF14306 PUA-like domain 6 144 1.1E-28 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 367 541 32.55 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 SUPERFAMILY SSF88697 6 143 2.98E-31 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 SUPERFAMILY SSF52374 144 363 4.5E-49 T 11-10-2018 Tbd_0210 83a4e2c19ab40cdb58b22e0d97d68179 544 Pfam PF01583 Adenylylsulphate kinase 368 522 2.2E-59 T 11-10-2018 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 155 1.7E-64 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 26.584 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 9.0E-26 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 SUPERFAMILY SSF54364 1 62 8.37E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 153 8.1E-38 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 SUPERFAMILY SSF55200 69 154 1.06E-33 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 Gene3D G3DSA:3.10.20.80 1 60 1.3E-26 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tbd_1008 bf5355f5d324b245ca48e7590c226d89 155 Gene3D G3DSA:3.30.110.10 61 155 7.6E-37 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tbd_2441 19e058cb026556fccea645a7dd220777 226 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 19 223 1.2E-52 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tbd_2441 19e058cb026556fccea645a7dd220777 226 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 80 4.9E-13 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_2441 19e058cb026556fccea645a7dd220777 226 SUPERFAMILY SSF52374 14 225 4.29E-53 T 11-10-2018 Tbd_2441 19e058cb026556fccea645a7dd220777 226 Gene3D G3DSA:3.40.50.620 15 225 1.4E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2441 19e058cb026556fccea645a7dd220777 226 Pfam PF01467 Cytidylyltransferase-like 19 197 2.0E-29 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_2441 19e058cb026556fccea645a7dd220777 226 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 15 224 30.907 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tbd_1005 463d248f03f091b7e10e0c83f9519bf7 183 Pfam PF02834 LigT like Phosphoesterase 19 90 6.1E-10 T 11-10-2018 IPR014051 Phosphoesterase, HXTX Tbd_1005 463d248f03f091b7e10e0c83f9519bf7 183 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 178 4.3E-29 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tbd_1005 463d248f03f091b7e10e0c83f9519bf7 183 SUPERFAMILY SSF55144 13 179 3.84E-40 T 11-10-2018 IPR009097 Cyclic phosphodiesterase Tbd_1005 463d248f03f091b7e10e0c83f9519bf7 183 Gene3D G3DSA:3.90.1140.10 10 180 3.1E-41 T 11-10-2018 Tbd_1005 463d248f03f091b7e10e0c83f9519bf7 183 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 179 18.528 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tbd_1946 9a47b711fe92de972cde3fa3a80790fb 146 Pfam PF12092 Protein of unknown function (DUF3568) 21 135 9.0E-9 T 11-10-2018 IPR021952 Protein of unknown function DUF3568 Tbd_1642 2c8163a5acca652662a45a9639493363 144 SMART SM00749 72 135 9.7E-10 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tbd_1642 2c8163a5acca652662a45a9639493363 144 Pfam PF04972 BON domain 67 134 1.4E-17 T 11-10-2018 IPR007055 BON domain Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 Gene3D G3DSA:3.30.1120.10 970 1040 1.1E-9 T 11-10-2018 Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 SUPERFAMILY SSF53448 13 252 1.88E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 Pfam PF00884 Sulfatase 560 902 5.9E-44 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 Gene3D G3DSA:3.40.720.10 560 919 3.8E-69 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 SUPERFAMILY SSF53649 559 1038 3.14E-87 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 Pfam PF13641 Glycosyltransferase like family 2 13 243 8.0E-13 T 11-10-2018 Tbd_0306 b1be031d1d82d8f4f9446d8ae367fcda 1041 Gene3D G3DSA:3.90.550.10 2 246 1.5E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1797 3e7c252ded71cc021d02c7551f59927f 219 TIGRFAM TIGR03008 pepcterm_CAAX: CAAX prenyl protease-related protein 4 219 2.1E-88 T 11-10-2018 IPR014346 Prenyl protease-related Tbd_1797 3e7c252ded71cc021d02c7551f59927f 219 Pfam PF02517 CAAX protease self-immunity 115 204 1.4E-18 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF52540 342 451 7.96E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SMART SM00982 994 1094 1.6E-47 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF143517 980 1130 3.66E-37 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF52540 509 769 8.29E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Pfam PF00271 Helicase conserved C-terminal domain 792 895 6.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SMART SM01058 465 562 4.8E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF52540 15 332 3.54E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.40.50.300 464 976 4.5E-231 T 11-10-2018 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:2.30.30.840 469 527 4.5E-231 T 11-10-2018 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.40.50.300 528 767 4.5E-231 T 11-10-2018 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1113 27.276 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF52540 769 975 3.97E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SUPERFAMILY SSF141259 458 534 3.53E-23 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.30.2060.10 124 209 1.1E-109 T 11-10-2018 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.90.1150.50 991 1132 7.0E-37 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Pfam PF02559 CarD-like/TRCF domain 466 561 2.4E-24 T 11-10-2018 IPR003711 CarD-like/TRCF domain Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SMART SM00490 812 896 1.3E-17 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Pfam PF03461 TRCF domain 995 1086 1.6E-25 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.40.50.11140 342 439 5.0E-16 T 11-10-2018 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1067 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Pfam PF00270 DEAD/DEAH box helicase 591 750 3.3E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 SMART SM00487 586 776 4.5E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_1656 f3933681b00d6f3d81e99b577ee3ab59 1146 Gene3D G3DSA:3.40.50.11180 20 328 1.1E-109 T 11-10-2018 Tbd_0669 15534f4a3bb501f6392bb11dd409b644 446 Pfam PF00155 Aminotransferase class I and II 96 435 7.1E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_0669 15534f4a3bb501f6392bb11dd409b644 446 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 290 299 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Tbd_0669 15534f4a3bb501f6392bb11dd409b644 446 Gene3D G3DSA:3.40.640.10 110 343 1.2E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0669 15534f4a3bb501f6392bb11dd409b644 446 SUPERFAMILY SSF53383 64 435 1.88E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0669 15534f4a3bb501f6392bb11dd409b644 446 Gene3D G3DSA:3.90.1150.10 90 435 1.2E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 Gene3D G3DSA:3.40.50.880 285 546 3.5E-101 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 Hamap MF_01227 CTP synthase [pyrG]. 2 541 51.58 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 SUPERFAMILY SSF52540 1 266 1.27E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 Pfam PF00117 Glutamine amidotransferase class-I 300 535 6.0E-56 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 SUPERFAMILY SSF52317 288 542 6.64E-85 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 TIGRFAM TIGR00337 PyrG: CTP synthase 1 536 2.6E-245 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 Gene3D G3DSA:3.40.50.300 1 283 8.2E-131 T 11-10-2018 Tbd_0619 edd67ceb7a704714ea08da44a6466cf1 546 Pfam PF06418 CTP synthase N-terminus 3 265 1.9E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 381 1.9E-130 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 Gene3D G3DSA:2.30.42.10 282 385 1.4E-27 T 11-10-2018 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 123 135 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 144 164 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 1.2E-53 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 SUPERFAMILY SSF50156 245 368 9.35E-26 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 Gene3D G3DSA:2.40.10.120 60 281 3.4E-84 T 11-10-2018 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 Pfam PF13365 Trypsin-like peptidase domain 114 248 1.5E-35 T 11-10-2018 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 SMART SM00228 287 369 1.4E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 Pfam PF13180 PDZ domain 288 378 6.7E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_1834 8166c9b7a6038f3bb6a153543e32858d 396 SUPERFAMILY SSF50494 64 283 3.75E-68 T 11-10-2018 IPR009003 Peptidase S1, PA clan Tbd_0820 10df7d31c58b5fc0e0eb005d0773ee94 509 SUPERFAMILY SSF48695 285 441 3.89E-6 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Tbd_0820 10df7d31c58b5fc0e0eb005d0773ee94 509 Gene3D G3DSA:1.10.760.10 389 509 1.1E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0820 10df7d31c58b5fc0e0eb005d0773ee94 509 SUPERFAMILY SSF46626 400 509 2.08E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1215 e07c476868bac99701e511a46e703adc 326 Gene3D G3DSA:1.10.443.10 103 316 8.5E-65 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_1215 e07c476868bac99701e511a46e703adc 326 SUPERFAMILY SSF56349 13 313 7.06E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_1215 e07c476868bac99701e511a46e703adc 326 Pfam PF00589 Phage integrase family 113 313 7.1E-45 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_1215 e07c476868bac99701e511a46e703adc 326 TIGRFAM TIGR02249 integrase_gron: integron integrase 13 325 1.1E-143 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 Tbd_1215 e07c476868bac99701e511a46e703adc 326 Gene3D G3DSA:1.10.150.130 10 96 9.2E-36 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_1215 e07c476868bac99701e511a46e703adc 326 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 13 96 3.5E-27 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tbd_1446 40ae8af177469e903152057471986844 574 SMART SM00278 54 73 230.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_1446 40ae8af177469e903152057471986844 574 SMART SM00278 94 113 12.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_1446 40ae8af177469e903152057471986844 574 SMART SM00278 129 148 76.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_1446 40ae8af177469e903152057471986844 574 SUPERFAMILY SSF47802 4 88 2.22E-20 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tbd_1446 40ae8af177469e903152057471986844 574 SMART SM00483 3 316 1.1E-22 T 11-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Tbd_1446 40ae8af177469e903152057471986844 574 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 186 205 8.9E-11 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1446 40ae8af177469e903152057471986844 574 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 303 311 8.9E-11 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1446 40ae8af177469e903152057471986844 574 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 61 78 8.9E-11 T 11-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1446 40ae8af177469e903152057471986844 574 SMART SM00481 340 419 3.9E-12 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tbd_1446 40ae8af177469e903152057471986844 574 Gene3D G3DSA:3.20.20.140 328 574 6.6E-69 T 11-10-2018 Tbd_1446 40ae8af177469e903152057471986844 574 Gene3D G3DSA:3.30.210.10 263 327 3.9E-26 T 11-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Tbd_1446 40ae8af177469e903152057471986844 574 PIRSF PIRSF005047 3 574 1.5E-233 T 11-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1446 40ae8af177469e903152057471986844 574 Gene3D G3DSA:3.30.460.10 158 262 8.7E-26 T 11-10-2018 Tbd_1446 40ae8af177469e903152057471986844 574 Pfam PF14520 Helix-hairpin-helix domain 95 149 4.3E-9 T 11-10-2018 Tbd_1446 40ae8af177469e903152057471986844 574 SUPERFAMILY SSF89550 339 570 1.05E-53 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tbd_1446 40ae8af177469e903152057471986844 574 SUPERFAMILY SSF81301 159 316 3.66E-41 T 11-10-2018 Tbd_1446 40ae8af177469e903152057471986844 574 Pfam PF14716 Helix-hairpin-helix domain 5 74 2.4E-20 T 11-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Tbd_1446 40ae8af177469e903152057471986844 574 Gene3D G3DSA:1.10.150.20 89 155 1.4E-21 T 11-10-2018 Tbd_1446 40ae8af177469e903152057471986844 574 Gene3D G3DSA:1.10.150.110 2 88 1.9E-24 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tbd_1446 40ae8af177469e903152057471986844 574 SUPERFAMILY SSF47781 94 153 9.85E-5 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_1446 40ae8af177469e903152057471986844 574 Pfam PF14791 DNA polymerase beta thumb 256 316 2.0E-20 T 11-10-2018 IPR029398 DNA polymerase beta, thumb domain Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 SUPERFAMILY SSF47384 195 275 8.83E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 Gene3D G3DSA:3.30.565.10 280 421 5.1E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 SMART SM00388 212 278 5.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 418 5.6E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 SMART SM00387 320 421 2.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 Pfam PF00672 HAMP domain 159 207 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 SMART SM00304 158 211 7.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 SUPERFAMILY SSF55874 271 418 3.93E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 9.5E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2610 4c04e8d658b10222b4ba61fd7fcf613b 421 Gene3D G3DSA:1.10.287.130 162 279 1.9E-22 T 11-10-2018 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Gene3D G3DSA:3.40.50.620 120 434 8.1E-155 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 91 2.8E-25 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 557 9.9E-130 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 557 24.99 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 SMART SM01016 9 91 2.1E-35 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 SUPERFAMILY SSF47323 435 557 5.1E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 1.8E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 1.8E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 1.8E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 1.8E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Pfam PF05746 DALR anticodon binding domain 440 557 1.9E-34 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Gene3D G3DSA:3.30.1360.70 3 107 1.6E-26 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 SUPERFAMILY SSF52374 117 450 4.56E-84 T 11-10-2018 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 SMART SM00836 440 557 8.9E-50 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Pfam PF00750 tRNA synthetases class I (R) 109 409 2.2E-25 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 SUPERFAMILY SSF55190 8 103 1.7E-23 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tbd_2782 a37a143e7bff4ade77494997e5c78a28 557 Gene3D G3DSA:1.10.730.10 435 557 8.1E-155 T 11-10-2018 Tbd_2377 33271e9a93814dd29dc4ebe9d003f6af 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 71 152 2.7E-24 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tbd_2377 33271e9a93814dd29dc4ebe9d003f6af 156 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 119 125 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Tbd_2377 33271e9a93814dd29dc4ebe9d003f6af 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 72 153 7.2E-26 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tbd_2377 33271e9a93814dd29dc4ebe9d003f6af 156 SUPERFAMILY SSF46767 69 152 1.44E-25 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Tbd_2377 33271e9a93814dd29dc4ebe9d003f6af 156 Gene3D G3DSA:1.10.10.10 70 155 4.6E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1756 870418834333216e9f9e5108871b4b1f 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 6.0E-69 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tbd_1756 870418834333216e9f9e5108871b4b1f 149 SUPERFAMILY SSF74982 3 127 5.1E-50 T 11-10-2018 IPR023620 Small protein B Tbd_1756 870418834333216e9f9e5108871b4b1f 149 Pfam PF01668 SmpB protein 3 145 1.0E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tbd_1756 870418834333216e9f9e5108871b4b1f 149 Gene3D G3DSA:2.40.280.10 1 124 4.3E-48 T 11-10-2018 IPR023620 Small protein B Tbd_1756 870418834333216e9f9e5108871b4b1f 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 72.963 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tbd_1756 870418834333216e9f9e5108871b4b1f 149 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site Tbd_1756 870418834333216e9f9e5108871b4b1f 149 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 4.5E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tbd_1251 c534928752b3d73975be0e1631c7caee 263 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 66 1.5E-20 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain Tbd_1251 c534928752b3d73975be0e1631c7caee 263 SUPERFAMILY SSF103088 132 246 1.31E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_1251 c534928752b3d73975be0e1631c7caee 263 Gene3D G3DSA:3.30.1330.60 87 253 5.2E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_1251 c534928752b3d73975be0e1631c7caee 263 Pfam PF00691 OmpA family 142 240 4.3E-18 T 11-10-2018 IPR006665 OmpA-like domain Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 Gene3D G3DSA:3.40.710.10 19 268 2.1E-74 T 11-10-2018 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 250 4.3E-60 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 SUPERFAMILY SSF56601 9 270 7.75E-67 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 Gene3D G3DSA:2.60.410.10 270 359 4.0E-22 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 SMART SM00936 270 360 9.1E-25 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 137 150 2.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 2.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 2.9E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 SUPERFAMILY SSF69189 270 362 3.14E-20 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0266 e2d10d8d4a2452a23ac1154418a398d3 377 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 270 358 2.7E-15 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 SMART SM00448 5 116 1.3E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Pfam PF02954 Bacterial regulatory protein, Fis family 423 459 9.8E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 SUPERFAMILY SSF52172 6 184 4.7E-41 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 SUPERFAMILY SSF52540 139 381 4.58E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Gene3D G3DSA:1.10.8.60 311 382 4.5E-20 T 11-10-2018 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Gene3D G3DSA:3.40.50.300 131 310 2.2E-65 T 11-10-2018 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 SMART SM00382 159 302 2.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Pfam PF00158 Sigma-54 interaction domain 140 305 4.7E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 2.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 2.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Pfam PF00072 Response regulator receiver domain 7 115 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Gene3D G3DSA:1.10.10.60 383 463 1.8E-20 T 11-10-2018 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 460 5.3E-212 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 Gene3D G3DSA:3.40.50.2300 3 124 2.9E-36 T 11-10-2018 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_2500 7b53d329bb1521f20aee99ab10c8da2b 476 SUPERFAMILY SSF46689 381 463 5.38E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0567 abe1885c3f1df66ecd3f714db3c517a5 120 Pfam PF00034 Cytochrome c 33 117 3.9E-4 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0567 abe1885c3f1df66ecd3f714db3c517a5 120 SUPERFAMILY SSF46626 7 119 1.19E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0567 abe1885c3f1df66ecd3f714db3c517a5 120 Gene3D G3DSA:1.10.760.10 10 119 1.2E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0567 abe1885c3f1df66ecd3f714db3c517a5 120 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 41 118 1.2E-25 T 11-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 3.5E-60 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 3.5E-60 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 3.5E-60 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 3.5E-60 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 11 36 3.5E-60 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 SMART SM00304 207 259 1.6E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 167 2.9E-16 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 SMART SM00283 260 507 4.0E-88 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 475 9.3E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 Gene3D G3DSA:1.10.287.950 206 509 2.6E-92 T 11-10-2018 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 SUPERFAMILY SSF58104 227 508 5.23E-76 T 11-10-2018 Tbd_1620 7783b91893d4dbd85bc32056fdd1b480 559 Pfam PF00672 HAMP domain 207 255 6.8E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 Pfam PF13437 HlyD family secretion protein 203 302 7.6E-9 T 11-10-2018 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 395 1.6E-31 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 Gene3D G3DSA:2.40.30.170 44 322 1.2E-49 T 11-10-2018 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 Gene3D G3DSA:2.40.420.20 41 380 1.2E-49 T 11-10-2018 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 Gene3D G3DSA:1.10.287.470 89 191 1.2E-49 T 11-10-2018 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 SUPERFAMILY SSF111369 44 176 1.57E-6 T 11-10-2018 Tbd_1581 3609e843823af87fd49d17fc5b6fa32e 396 Gene3D G3DSA:2.40.50.100 55 236 1.2E-49 T 11-10-2018 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 6.6E-21 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Gene3D G3DSA:3.30.565.10 280 432 3.9E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SMART SM00387 316 428 4.4E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SMART SM00091 98 164 9.8E-4 T 11-10-2018 IPR000014 PAS domain Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Gene3D G3DSA:1.10.287.130 198 272 4.6E-23 T 11-10-2018 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 7.7E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.7E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Gene3D G3DSA:3.30.450.20 83 197 7.0E-6 T 11-10-2018 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 425 2.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SUPERFAMILY SSF55785 86 197 1.18E-7 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SMART SM00388 205 272 4.4E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SUPERFAMILY SSF55874 261 426 2.1E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 4.0E-137 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Tbd_0217 d98b09171084a396a3b05f398eab85b5 449 SUPERFAMILY SSF47384 193 271 2.75E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 433 1.1E-36 T 11-10-2018 IPR000160 GGDEF domain Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 SMART SM00267 263 434 3.1E-52 T 11-10-2018 IPR000160 GGDEF domain Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 429 2.4E-40 T 11-10-2018 IPR000160 GGDEF domain Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 Gene3D G3DSA:3.20.20.450 445 699 5.3E-106 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 SUPERFAMILY SSF141868 450 696 2.22E-91 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 Pfam PF00563 EAL domain 450 685 2.5E-77 T 11-10-2018 IPR001633 EAL domain Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 SMART SM00052 444 690 5.0E-127 T 11-10-2018 IPR001633 EAL domain Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 SUPERFAMILY SSF55073 279 435 1.33E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 Gene3D G3DSA:3.30.70.270 268 439 4.5E-51 T 11-10-2018 Tbd_2578 acbc4c1f7cd55d029602a41f8bebe6e0 702 Pfam PF17159 Membrane-associated sensor domain 37 266 1.5E-62 T 11-10-2018 IPR033425 Membrane-associated sensor domain MASE3 Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 SUPERFAMILY SSF54523 8 113 2.15E-16 T 11-10-2018 Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 5.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 28 4.7E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 1.2E-5 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 1.2E-5 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1440 1e217d47517c7a69607fa6c852bbc9b7 158 Gene3D G3DSA:3.30.700.10 8 98 2.2E-10 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.70.1430 38 822 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82866 296 497 1.57E-49 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:1.20.1640.10 8 517 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82693 38 131 4.45E-26 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.70.1430 572 673 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 5.7E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82693 570 674 1.36E-31 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82866 812 1036 1.44E-41 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82693 135 330 3.98E-28 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82714 182 272 6.41E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 SUPERFAMILY SSF82714 728 813 3.66E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:1.20.1640.10 518 1028 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.70.1440 674 870 0.0 T 11-10-2018 Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1417 8765b2b5789fa3e0491f6fbbff730a52 1054 Pfam PF00873 AcrB/AcrD/AcrF family 1 1032 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 SUPERFAMILY SSF53244 310 446 4.84E-38 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Pfam PF08245 Mur ligase middle domain 108 290 2.6E-22 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 SUPERFAMILY SSF53623 95 307 2.35E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 58.674 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 446 5.8E-220 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 358 8.8E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Gene3D G3DSA:3.90.190.20 313 448 1.2E-27 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 SUPERFAMILY SSF51984 1 90 4.19E-21 T 11-10-2018 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Pfam PF01225 Mur ligase family, catalytic domain 2 99 3.4E-17 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Gene3D G3DSA:3.40.50.720 1 90 5.6E-35 T 11-10-2018 Tbd_2572 3c168bea58d0c4c71f3d265fee87ae54 466 Gene3D G3DSA:3.40.1190.10 91 312 6.1E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 632 3.9E-229 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Pfam PF03129 Anticodon binding domain 542 631 2.3E-20 T 11-10-2018 IPR004154 Anticodon-binding Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 2.3E-46 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 35.089 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 SMART SM00863 170 220 6.1E-23 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 SUPERFAMILY SSF81271 2 61 1.16E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 SUPERFAMILY SSF55186 64 242 7.06E-67 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Gene3D G3DSA:3.30.980.10 69 223 1.4E-65 T 11-10-2018 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Gene3D G3DSA:3.40.50.800 533 637 2.1E-30 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Gene3D G3DSA:3.30.930.10 224 532 2.0E-130 T 11-10-2018 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Pfam PF02824 TGS domain 2 61 1.6E-9 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Gene3D G3DSA:3.10.20.30 1 62 1.9E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 2.8E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 2.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 2.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 2.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 2.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 2.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 SUPERFAMILY SSF52954 531 633 8.0E-31 T 11-10-2018 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 SUPERFAMILY SSF55681 244 527 1.38E-103 T 11-10-2018 Tbd_1007 44afdfaa0ada03577eac72db7682b385 637 Gene3D G3DSA:3.30.54.20 130 187 1.4E-65 T 11-10-2018 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Pfam PF00128 Alpha amylase, catalytic domain 287 358 7.1E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 136 218 2.6E-20 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 112 739 45.363 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 PIRSF PIRSF000463 21 740 1.5E-287 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 SUPERFAMILY SSF81296 30 125 9.45E-11 T 11-10-2018 IPR014756 Immunoglobulin E-set Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 640 737 4.6E-19 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Gene3D G3DSA:3.20.20.80 236 634 4.6E-166 T 11-10-2018 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Gene3D G3DSA:2.60.40.1180 635 738 1.6E-36 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 120 737 1.7E-284 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 SUPERFAMILY SSF51011 635 738 3.6E-32 T 11-10-2018 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 SUPERFAMILY SSF51445 191 628 1.25E-121 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 SMART SM00642 262 616 5.2E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_2058 8db6bd8809c3892722ac14a6bba3f013 740 Gene3D G3DSA:2.60.40.10 17 232 1.3E-65 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 SUPERFAMILY SSF55021 92 177 5.0E-20 T 11-10-2018 Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 SUPERFAMILY SSF55021 6 84 3.62E-16 T 11-10-2018 Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 Pfam PF13740 ACT domain 7 78 2.6E-21 T 11-10-2018 Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 Gene3D G3DSA:3.30.70.260 4 87 8.4E-23 T 11-10-2018 Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 PIRSF PIRSF028103 4 179 4.2E-56 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Tbd_0052 0c4fc4daec17a5f2bd19ec4f7da5cb24 179 Gene3D G3DSA:3.30.70.260 92 177 3.1E-17 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.70.1430 43 837 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82866 308 508 8.5E-38 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82693 43 125 8.72E-17 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82714 188 269 1.1E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82866 881 1058 4.32E-42 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82693 147 340 1.19E-8 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Pfam PF00873 AcrB/AcrD/AcrF family 11 1057 1.9E-151 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:1.20.1640.10 19 524 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82714 742 822 6.67E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.70.1320 139 343 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.70.1430 580 690 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 SUPERFAMILY SSF82693 576 691 7.85E-13 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.70.1440 691 906 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.2090.10 185 276 2.5E-228 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:1.20.1640.10 525 1056 2.5E-228 T 11-10-2018 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 Gene3D G3DSA:3.30.2090.10 739 829 2.5E-228 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 482 505 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2397 0212aaa7aa35c7e9d0075d262f045be1 1065 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 2.6E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2386 fe1f671f7ad05b64ace96d43c21ac280 148 Gene3D G3DSA:1.10.1510.10 1 90 4.1E-29 T 11-10-2018 Tbd_2386 fe1f671f7ad05b64ace96d43c21ac280 148 SUPERFAMILY SSF89095 1 146 4.5E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tbd_2386 fe1f671f7ad05b64ace96d43c21ac280 148 Gene3D G3DSA:1.10.10.410 91 147 5.1E-20 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tbd_2386 fe1f671f7ad05b64ace96d43c21ac280 148 Pfam PF09424 Yqey-like protein 5 146 2.1E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 Gene3D G3DSA:2.60.260.20 216 292 1.2E-20 T 11-10-2018 Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 Pfam PF01556 DnaJ C terminal domain 140 292 1.1E-27 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 SMART SM00271 4 61 4.0E-29 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 Gene3D G3DSA:1.10.287.110 2 122 3.0E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 PRINTS PR00625 DnaJ domain signature 61 80 3.4E-21 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 PRINTS PR00625 DnaJ domain signature 25 40 3.4E-21 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 PRINTS PR00625 DnaJ domain signature 41 61 3.4E-21 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 PRINTS PR00625 DnaJ domain signature 7 25 3.4E-21 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 Pfam PF00226 DnaJ domain 5 66 2.7E-24 T 11-10-2018 IPR001623 DnaJ domain Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 SUPERFAMILY SSF49493 131 227 3.66E-15 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 Gene3D G3DSA:2.60.260.20 133 214 2.1E-20 T 11-10-2018 Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 SUPERFAMILY SSF46565 1 108 2.09E-31 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1431 88033c14e378bafb5fb6d12e2d93503e 318 SUPERFAMILY SSF49493 222 303 2.09E-15 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tbd_1839 c57dc0c689c7fa25a92bcbd22de1d1c6 182 SMART SM00479 7 180 7.0E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_1839 c57dc0c689c7fa25a92bcbd22de1d1c6 182 Gene3D G3DSA:3.30.420.10 2 182 2.5E-72 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_1839 c57dc0c689c7fa25a92bcbd22de1d1c6 182 Pfam PF00929 Exonuclease 9 170 5.0E-31 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_1839 c57dc0c689c7fa25a92bcbd22de1d1c6 182 SUPERFAMILY SSF53098 2 179 2.73E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_1839 c57dc0c689c7fa25a92bcbd22de1d1c6 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.659 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 Pfam PF01494 FAD binding domain 3 322 7.4E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 Gene3D G3DSA:3.50.50.60 4 322 1.0E-79 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 SUPERFAMILY SSF51905 3 368 6.69E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 373 3.9E-99 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 280 293 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 Gene3D G3DSA:3.30.9.50 71 255 1.0E-79 T 11-10-2018 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 8.6E-17 T 11-10-2018 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 297 8.6E-17 T 11-10-2018 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 8.6E-17 T 11-10-2018 Tbd_2333 e729c2463d122d0b4ca6c8a32d8d848d 378 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 266 281 8.6E-17 T 11-10-2018 Tbd_1216 692f4bf25ca0bf59bd8c129f704c3891 151 Pfam PF14437 MafB19-like deaminase 1 142 5.4E-28 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tbd_1216 692f4bf25ca0bf59bd8c129f704c3891 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 46.662 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tbd_1216 692f4bf25ca0bf59bd8c129f704c3891 151 Gene3D G3DSA:3.40.140.10 1 151 8.1E-60 T 11-10-2018 Tbd_1216 692f4bf25ca0bf59bd8c129f704c3891 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tbd_1216 692f4bf25ca0bf59bd8c129f704c3891 151 SUPERFAMILY SSF53927 1 146 4.18E-55 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tbd_1041 05bd4c2d50ea788922ff83d77c50e5dd 318 Gene3D G3DSA:3.60.15.10 20 268 6.9E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1041 05bd4c2d50ea788922ff83d77c50e5dd 318 SMART SM00849 58 244 3.7E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1041 05bd4c2d50ea788922ff83d77c50e5dd 318 SUPERFAMILY SSF56281 2 295 2.17E-63 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1041 05bd4c2d50ea788922ff83d77c50e5dd 318 Pfam PF00753 Metallo-beta-lactamase superfamily 57 244 1.3E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_2576 da57aa4076b969f048ee795b148079ac 294 Gene3D G3DSA:3.30.1150.10 123 287 1.5E-20 T 11-10-2018 Tbd_2576 da57aa4076b969f048ee795b148079ac 294 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 208 285 1.2E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Tbd_2576 da57aa4076b969f048ee795b148079ac 294 SUPERFAMILY SSF74653 180 288 4.58E-21 T 11-10-2018 Tbd_2576 da57aa4076b969f048ee795b148079ac 294 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 206 273 3.7E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:2.40.30.10 208 336 3.3E-54 T 11-10-2018 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-70 T 11-10-2018 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.2E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 11-10-2018 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF50465 304 395 3.12E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF52540 3 216 3.12E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF50447 207 303 5.7E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.759 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.2E-229 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0403 dd13b447723a0fc5bb4ff1d1a0b14948 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:2.40.30.10 208 336 3.3E-54 T 11-10-2018 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:3.40.50.300 1 205 1.1E-70 T 11-10-2018 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.6E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.2E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.3E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 1.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Gene3D G3DSA:2.40.30.10 340 394 2.6E-28 T 11-10-2018 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF50465 304 395 3.12E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF52540 3 216 3.12E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 SUPERFAMILY SSF50447 207 303 5.7E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.759 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.2E-229 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tbd_0391 dd13b447723a0fc5bb4ff1d1a0b14948 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 SMART SM00938 4 105 1.4E-67 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 SUPERFAMILY SSF54913 2 112 2.03E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 PRINTS PR00340 P-II protein signature 23 41 7.2E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 PRINTS PR00340 P-II protein signature 2 17 7.2E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 PRINTS PR00340 P-II protein signature 52 75 7.2E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 PRINTS PR00340 P-II protein signature 83 103 7.2E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 PIRSF PIRSF039144 1 112 4.4E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Tbd_0808 67e17f39b33ef5f50cb0873275fdfbcc 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 Pfam PF01165 Ribosomal protein S21 3 56 5.6E-20 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.7E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 56 3.0E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.0E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.0E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.0E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.0E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 Gene3D G3DSA:1.20.5.1150 16 54 7.5E-19 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2385 462e1d7fd3c1872734d3e1de9b50b0cf 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.603 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 605 5.4E-231 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 SMART SM00437 245 510 1.2E-109 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Gene3D G3DSA:3.30.65.10 568 612 2.3E-5 T 11-10-2018 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF01751 Toprim domain 4 113 7.0E-26 T 11-10-2018 IPR006171 TOPRIM domain Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 282 304 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Gene3D G3DSA:3.40.50.140 1 134 2.4E-46 T 11-10-2018 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF01131 DNA topoisomerase 128 546 3.0E-128 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF13368 Topoisomerase C-terminal repeat 751 803 3.1E-21 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF13368 Topoisomerase C-terminal repeat 684 737 6.3E-17 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF13368 Topoisomerase C-terminal repeat 620 681 2.7E-9 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 SUPERFAMILY SSF57783 573 607 2.21E-9 T 11-10-2018 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 295 304 2.9E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 2.9E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 2.9E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 373 389 2.9E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 2.9E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 SMART SM00493 2 101 5.3E-28 T 11-10-2018 IPR006171 TOPRIM domain Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 572 608 2.8E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Gene3D G3DSA:1.10.460.10 135 550 1.5E-164 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Gene3D G3DSA:2.70.20.10 184 457 1.5E-164 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 SUPERFAMILY SSF56712 1 582 9.42E-187 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 705 52.878 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 SMART SM00436 104 192 1.4E-45 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Tbd_0010 5b65509109c60dc4c05b800257add8ec 857 Gene3D G3DSA:1.10.290.10 253 388 1.5E-164 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Tbd_1637 d8573a5652b0ef5c576c02e1c6d0e643 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 132 1.9E-35 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tbd_1637 d8573a5652b0ef5c576c02e1c6d0e643 133 Pfam PF00460 Flagella basal body rod protein 9 39 1.1E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_1637 d8573a5652b0ef5c576c02e1c6d0e643 133 PIRSF PIRSF002889 1 133 1.4E-43 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 SUPERFAMILY SSF52172 6 136 1.85E-33 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 Gene3D G3DSA:3.40.50.12740 8 214 4.8E-60 T 11-10-2018 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 Pfam PF00072 Response regulator receiver domain 9 121 4.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 7.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 7.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 7.4E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 SMART SM00448 7 120 2.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 SMART SM00421 151 208 2.1E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 1.1E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1588 ab62daee5b91e3a9c0ab86a43a061ded 215 SUPERFAMILY SSF46894 145 214 2.96E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1856 f477be0baa497b384483ce9a61983298 309 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 305 8.4E-93 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tbd_1856 f477be0baa497b384483ce9a61983298 309 SUPERFAMILY SSF82114 171 307 1.94E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tbd_1856 f477be0baa497b384483ce9a61983298 309 Pfam PF06574 FAD synthetase 14 164 8.9E-52 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tbd_1856 f477be0baa497b384483ce9a61983298 309 SMART SM00904 180 306 1.5E-63 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tbd_1856 f477be0baa497b384483ce9a61983298 309 Gene3D G3DSA:3.40.50.620 6 183 3.6E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1856 f477be0baa497b384483ce9a61983298 309 PIRSF PIRSF004491 1 309 6.8E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tbd_1856 f477be0baa497b384483ce9a61983298 309 SUPERFAMILY SSF52374 14 172 4.69E-35 T 11-10-2018 Tbd_1856 f477be0baa497b384483ce9a61983298 309 Gene3D G3DSA:2.40.30.30 185 309 7.0E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tbd_1856 f477be0baa497b384483ce9a61983298 309 Pfam PF01687 Riboflavin kinase 181 305 3.5E-38 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.2E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.0E-25 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 241.91 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Gene3D G3DSA:3.40.50.300 130 417 6.3E-130 T 11-10-2018 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SUPERFAMILY SSF52540 90 371 4.33E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Gene3D G3DSA:2.40.50.140 48 123 2.5E-31 T 11-10-2018 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SMART SM00382 170 356 1.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SUPERFAMILY SSF50249 49 125 4.71E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Gene3D G3DSA:1.10.720.10 1 47 4.8E-18 T 11-10-2018 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SUPERFAMILY SSF68912 1 46 9.81E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SMART SM00959 5 47 1.9E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.1E-208 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.6E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Tbd_0037 dd409dd210bd4abe9d81f2b9b15f4e33 419 SMART SM00357 52 118 2.2E-16 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Tbd_1344 1b2fd5cb478bb53a67331dad11540365 258 SUPERFAMILY SSF47413 29 91 2.23E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tbd_1344 1b2fd5cb478bb53a67331dad11540365 258 Pfam PF13560 Helix-turn-helix domain 34 92 2.1E-9 T 11-10-2018 Tbd_1344 1b2fd5cb478bb53a67331dad11540365 258 SMART SM00530 38 93 3.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tbd_1344 1b2fd5cb478bb53a67331dad11540365 258 Gene3D G3DSA:1.10.260.40 26 99 6.0E-12 T 11-10-2018 Tbd_2280 28964cedcd8c0589149d2b5cd7c4558a 169 SUPERFAMILY SSF54534 5 142 2.77E-19 T 11-10-2018 Tbd_2280 28964cedcd8c0589149d2b5cd7c4558a 169 Gene3D G3DSA:3.10.50.40 5 152 7.1E-30 T 11-10-2018 Tbd_2280 28964cedcd8c0589149d2b5cd7c4558a 169 Gene3D G3DSA:2.40.10.330 73 123 7.1E-30 T 11-10-2018 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 SUPERFAMILY SSF111369 56 288 7.06E-17 T 11-10-2018 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 Gene3D G3DSA:2.40.30.170 52 300 1.4E-59 T 11-10-2018 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 1.9E-51 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 Gene3D G3DSA:2.40.50.100 63 223 1.4E-59 T 11-10-2018 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 Gene3D G3DSA:1.10.287.470 97 188 1.4E-59 T 11-10-2018 Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 280 1.4E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_1361 48837fcb63357db87f09ee06a84f5216 383 Gene3D G3DSA:2.40.420.20 51 359 1.4E-59 T 11-10-2018 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 SUPERFAMILY SSF53850 93 293 5.5E-49 T 11-10-2018 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 SUPERFAMILY SSF46785 3 104 2.94E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 Gene3D G3DSA:1.10.10.10 3 91 1.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 Pfam PF03466 LysR substrate binding domain 90 292 7.8E-55 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 6.4E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2639 656eaf45fee24b0fe5c641ba1c994d7a 302 Gene3D G3DSA:3.40.190.290 93 295 6.2E-47 T 11-10-2018 Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 Gene3D G3DSA:3.30.200.70 13 108 6.9E-122 T 11-10-2018 Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 SUPERFAMILY SSF56112 5 325 4.37E-84 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 Hamap MF_01497 Stress response kinase A [srkA]. 4 321 47.72 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 Gene3D G3DSA:1.10.510.10 60 261 6.9E-122 T 11-10-2018 Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 Pfam PF01636 Phosphotransferase enzyme family 36 259 2.3E-37 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Tbd_0059 5fc2ded3571d5a72981ff16873b5e00e 327 Gene3D G3DSA:1.20.1270.170 149 310 6.9E-122 T 11-10-2018 Tbd_2404 626ebb863b0176e54e857356bee03979 328 Gene3D G3DSA:3.40.50.720 1 183 9.6E-55 T 11-10-2018 Tbd_2404 626ebb863b0176e54e857356bee03979 328 SUPERFAMILY SSF48179 175 327 8.67E-56 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PIRSF PIRSF000114 1 328 7.0E-101 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 129 149 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 194 218 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 234 251 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 169 193 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 2.8E-43 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 184 205 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 176 316 2.4E-51 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 SUPERFAMILY SSF51735 1 176 2.7E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2404 626ebb863b0176e54e857356bee03979 328 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 318 36.071 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 155 3.8E-41 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tbd_2404 626ebb863b0176e54e857356bee03979 328 Gene3D G3DSA:1.10.1040.10 185 328 5.2E-50 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tbd_1548 67272b67cb694666821813b765c8fc91 77 Gene3D G3DSA:1.10.1200.10 2 77 8.4E-30 T 11-10-2018 IPR036736 ACP-like superfamily Tbd_1548 67272b67cb694666821813b765c8fc91 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 75 1.2E-34 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tbd_1548 67272b67cb694666821813b765c8fc91 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 2.0E-17 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Tbd_1548 67272b67cb694666821813b765c8fc91 77 SMART SM00823 Phosphopantetheine attachment site 4 62 0.0016 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Tbd_1548 67272b67cb694666821813b765c8fc91 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 75 2.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tbd_1548 67272b67cb694666821813b765c8fc91 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site Tbd_1548 67272b67cb694666821813b765c8fc91 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 21.533 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tbd_1548 67272b67cb694666821813b765c8fc91 77 SUPERFAMILY SSF47336 4 75 2.22E-23 T 11-10-2018 IPR036736 ACP-like superfamily Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 9.7E-20 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 SUPERFAMILY SSF63380 4 101 3.03E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 2.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 2.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 159 2.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 201 209 2.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 SUPERFAMILY SSF52343 91 231 6.29E-38 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 Gene3D G3DSA:2.40.30.10 1 98 6.3E-17 T 11-10-2018 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00406 Cytochrome B5 reductase signature 111 130 1.2E-7 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00406 Cytochrome B5 reductase signature 148 159 1.2E-7 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00406 Cytochrome B5 reductase signature 88 102 1.2E-7 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 PRINTS PR00406 Cytochrome B5 reductase signature 201 209 1.2E-7 T 11-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 Pfam PF00970 Oxidoreductase FAD-binding domain 13 102 5.7E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tbd_1104 95ee544f93eea8d41a5aa8189c03bfa1 234 Gene3D G3DSA:3.40.50.80 104 234 8.1E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1646 f3d9528cd312b5e9bf54305a6dace7d5 210 Gene3D G3DSA:1.10.1060.10 3 112 2.4E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1646 f3d9528cd312b5e9bf54305a6dace7d5 210 SUPERFAMILY SSF46548 18 108 5.06E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1646 f3d9528cd312b5e9bf54305a6dace7d5 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 32 43 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1646 f3d9528cd312b5e9bf54305a6dace7d5 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1646 f3d9528cd312b5e9bf54305a6dace7d5 210 Pfam PF13183 4Fe-4S dicluster domain 30 91 1.8E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2584 59b9510168e978723d0ff9a8c548550f 520 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 20 504 23.538 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Tbd_2584 59b9510168e978723d0ff9a8c548550f 520 Gene3D G3DSA:3.60.110.10 240 485 1.1E-19 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_2584 59b9510168e978723d0ff9a8c548550f 520 Pfam PF00795 Carbon-nitrogen hydrolase 245 492 2.3E-30 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tbd_2584 59b9510168e978723d0ff9a8c548550f 520 SUPERFAMILY SSF56317 241 497 2.22E-42 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_2584 59b9510168e978723d0ff9a8c548550f 520 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 74 466 9.2E-101 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Tbd_2073 509758cbd51e8540061bff149bcda190 445 Gene3D G3DSA:1.10.150.130 125 243 2.0E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_2073 509758cbd51e8540061bff149bcda190 445 Gene3D G3DSA:3.30.160.390 38 124 4.4E-31 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Tbd_2073 509758cbd51e8540061bff149bcda190 445 Gene3D G3DSA:1.10.443.10 265 420 1.7E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2073 509758cbd51e8540061bff149bcda190 445 SUPERFAMILY SSF56349 135 421 4.12E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2073 509758cbd51e8540061bff149bcda190 445 Pfam PF00589 Phage integrase family 251 398 4.0E-15 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2073 509758cbd51e8540061bff149bcda190 445 Pfam PF13356 Arm DNA-binding domain 40 123 6.3E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 Gene3D G3DSA:1.10.10.10 3 89 1.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 SUPERFAMILY SSF53850 90 296 2.33E-46 T 11-10-2018 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 SUPERFAMILY SSF46785 4 86 1.91E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 Gene3D G3DSA:3.40.190.10 91 290 3.3E-67 T 11-10-2018 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 Pfam PF03466 LysR substrate binding domain 88 293 5.1E-45 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 Gene3D G3DSA:3.40.190.10 163 265 3.3E-67 T 11-10-2018 Tbd_1116 6c99358ffd67c240f31436cac7a65678 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 SUPERFAMILY SSF52833 3 107 2.34E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0036 f2926421e3c219927b86f2c322c31106 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 Pfam PF00085 Thioredoxin 5 106 1.5E-32 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 Gene3D G3DSA:3.40.30.10 5 108 1.8E-34 T 11-10-2018 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.6E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 PIRSF PIRSF000077 2 108 2.2E-43 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 PRINTS PR00421 Thioredoxin family signature 32 41 1.2E-9 T 11-10-2018 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 PRINTS PR00421 Thioredoxin family signature 24 32 1.2E-9 T 11-10-2018 Tbd_0036 f2926421e3c219927b86f2c322c31106 108 PRINTS PR00421 Thioredoxin family signature 72 83 1.2E-9 T 11-10-2018 Tbd_0799 21e0dfc9af70644eb0612da5fdbcdf2e 204 Pfam PF01351 Ribonuclease HII 17 193 1.6E-37 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain Tbd_0799 21e0dfc9af70644eb0612da5fdbcdf2e 204 SUPERFAMILY SSF53098 12 200 2.12E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_0799 21e0dfc9af70644eb0612da5fdbcdf2e 204 Gene3D G3DSA:3.30.420.10 8 203 8.4E-74 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0799 21e0dfc9af70644eb0612da5fdbcdf2e 204 Hamap MF_00052_B Ribonuclease HII [rnhB]. 15 194 35.931 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 2.2E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 1.3E-201 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 Gene3D G3DSA:3.10.20.70 2 104 2.6E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 SUPERFAMILY SSF55931 102 468 1.08E-136 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 3.1E-138 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 Gene3D G3DSA:3.30.590.10 105 457 5.7E-147 T 11-10-2018 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 SMART SM01230 102 379 1.7E-147 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tbd_2503 40b4b320b5fad194100b51d23c59a73e 469 SUPERFAMILY SSF54368 4 99 3.4E-34 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tbd_2682 501a0f72abb91313325c62968afa29c4 400 SUPERFAMILY SSF116734 11 177 1.49E-30 T 11-10-2018 Tbd_2682 501a0f72abb91313325c62968afa29c4 400 SUPERFAMILY SSF116734 189 397 9.16E-33 T 11-10-2018 Tbd_2682 501a0f72abb91313325c62968afa29c4 400 Pfam PF01420 Type I restriction modification DNA specificity domain 10 157 1.7E-19 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Tbd_2682 501a0f72abb91313325c62968afa29c4 400 Gene3D G3DSA:3.90.220.20 186 392 9.9E-29 T 11-10-2018 Tbd_2682 501a0f72abb91313325c62968afa29c4 400 Gene3D G3DSA:3.90.220.20 5 134 9.3E-25 T 11-10-2018 Tbd_1415 2744a72378744725860de458c0327ee0 520 Pfam PF02321 Outer membrane efflux protein 112 296 5.5E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1415 2744a72378744725860de458c0327ee0 520 Pfam PF02321 Outer membrane efflux protein 328 505 6.2E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1415 2744a72378744725860de458c0327ee0 520 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 374 385 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Tbd_1415 2744a72378744725860de458c0327ee0 520 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 54 507 8.9E-114 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Tbd_1415 2744a72378744725860de458c0327ee0 520 SUPERFAMILY SSF56954 41 509 1.05E-105 T 11-10-2018 Tbd_1415 2744a72378744725860de458c0327ee0 520 Gene3D G3DSA:2.20.200.10 147 396 5.0E-137 T 11-10-2018 Tbd_1415 2744a72378744725860de458c0327ee0 520 Gene3D G3DSA:1.20.1600.10 100 508 5.0E-137 T 11-10-2018 Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 SUPERFAMILY SSF52833 13 83 5.11E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 SUPERFAMILY SSF48371 133 214 9.6E-10 T 11-10-2018 IPR016024 Armadillo-type fold Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 Gene3D G3DSA:1.25.10.10 104 218 2.8E-8 T 11-10-2018 IPR011989 Armadillo-like helical Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 Pfam PF13646 HEAT repeats 131 210 1.0E-8 T 11-10-2018 Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 Gene3D G3DSA:3.40.30.10 9 87 1.3E-7 T 11-10-2018 Tbd_0067 5214d9104cc59aece2dfb5b82d5ebea0 218 Pfam PF13192 Thioredoxin domain 15 83 5.7E-7 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 Gene3D G3DSA:2.170.130.10 46 172 2.7E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 Gene3D G3DSA:2.40.170.20 173 698 1.0E-86 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 681 698 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 155 2.4E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 SUPERFAMILY SSF56935 29 698 8.14E-98 T 11-10-2018 Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 698 1.4E-92 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Tbd_0715 e6f6cabf79bdf0366361752a856c249f 698 Pfam PF00593 TonB dependent receptor 279 696 1.8E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 PIRSF PIRSF006487 1 361 2.0E-84 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Gene3D G3DSA:4.10.1250.10 236 277 5.1E-22 T 11-10-2018 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 357 44.527 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 SUPERFAMILY SSF103025 4 274 2.35E-92 T 11-10-2018 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 357 2.2E-123 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Gene3D G3DSA:3.30.1360.120 9 235 1.4E-80 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Gene3D G3DSA:2.40.30.110 278 362 4.0E-30 T 11-10-2018 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 SUPERFAMILY SSF101790 275 359 4.74E-24 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 351 3.4E-17 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Gene3D G3DSA:3.30.70.1400 54 143 1.4E-80 T 11-10-2018 Tbd_0178 f5b7d51e043e02dd0b9d24142ab47a99 362 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 258 1.6E-87 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 188 1.9E-39 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 SUPERFAMILY SSF53335 18 187 1.59E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 Gene3D G3DSA:3.40.50.150 6 190 7.0E-52 T 11-10-2018 Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 Pfam PF03602 Conserved hypothetical protein 95 18 186 2.0E-45 T 11-10-2018 Tbd_0379 d72cd0b299abc7ba49d00a41a427425f 190 PIRSF PIRSF004553 17 190 1.7E-44 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 Pfam PF01207 Dihydrouridine synthase (Dus) 13 319 3.1E-107 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 PIRSF PIRSF006621 1 327 3.1E-107 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 Gene3D G3DSA:1.10.1200.80 253 327 4.7E-13 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 Gene3D G3DSA:3.20.20.70 7 249 2.9E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 322 50.559 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 1.4E-125 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Tbd_2456 6253ca6cf239a0510d50c72a7400c66d 350 SUPERFAMILY SSF51395 10 319 4.03E-90 T 11-10-2018 Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 SUPERFAMILY SSF52172 1 176 1.3E-37 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 SMART SM00448 1 112 4.6E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 1.4E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 Gene3D G3DSA:3.40.50.2300 1 121 6.2E-39 T 11-10-2018 Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 Gene3D G3DSA:1.10.10.10 124 219 3.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0136 6344344f4fc6e6e5dfb1131b209fdda6 220 SMART SM00862 145 216 2.7E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_0171 29ce2b0f5f2a83e14a41d1ff0d5c04c2 310 Gene3D G3DSA:3.40.1190.20 1 310 2.9E-107 T 11-10-2018 IPR029056 Ribokinase-like Tbd_0171 29ce2b0f5f2a83e14a41d1ff0d5c04c2 310 SUPERFAMILY SSF53613 1 296 8.89E-63 T 11-10-2018 IPR029056 Ribokinase-like Tbd_0171 29ce2b0f5f2a83e14a41d1ff0d5c04c2 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Tbd_0171 29ce2b0f5f2a83e14a41d1ff0d5c04c2 310 Pfam PF00294 pfkB family carbohydrate kinase 32 293 5.2E-35 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Tbd_1100 2d12b2434f2821c858f6d29e9eb66c23 252 Pfam PF12706 Beta-lactamase superfamily domain 22 205 1.3E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1100 2d12b2434f2821c858f6d29e9eb66c23 252 SMART SM00849 11 187 1.3E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1100 2d12b2434f2821c858f6d29e9eb66c23 252 SUPERFAMILY SSF56281 1 241 4.46E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1100 2d12b2434f2821c858f6d29e9eb66c23 252 Gene3D G3DSA:3.60.15.10 2 247 2.3E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:1.20.1640.10 510 1020 1.4E-272 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82866 294 500 1.7E-38 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.2090.10 183 275 1.4E-272 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82693 139 322 2.62E-13 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1027 3.4E-239 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82693 566 656 3.01E-7 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 474 497 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.7E-33 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.70.1430 42 813 1.4E-272 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Pfam PF00873 AcrB/AcrD/AcrF family 7 1022 1.2E-260 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82714 718 800 3.79E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82866 800 1027 1.05E-47 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:1.20.1640.10 13 509 1.4E-272 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82714 186 270 5.62E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.70.1440 666 864 1.4E-272 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 SUPERFAMILY SSF82693 43 133 2.62E-23 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.70.1430 567 665 1.4E-272 T 11-10-2018 Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.2090.10 717 805 1.4E-272 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_0902 9daff6a914bf7ade722b09b6ee95e5a8 1036 Gene3D G3DSA:3.30.70.1320 136 329 1.4E-272 T 11-10-2018 Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 Pfam PF01370 NAD dependent epimerase/dehydratase family 22 242 2.9E-28 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 Gene3D G3DSA:1.20.1440.130 523 671 7.2E-14 T 11-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 Gene3D G3DSA:3.40.50.720 11 360 2.4E-54 T 11-10-2018 Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 20 161 3.6E-4 T 11-10-2018 Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 Pfam PF03779 SPW repeat 408 450 1.3E-6 T 11-10-2018 IPR005530 SPW repeat Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 SUPERFAMILY SSF51735 19 352 1.25E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1471 92da59d902cf7b1256d185ea61900aeb 830 Pfam PF07884 Vitamin K epoxide reductase family 532 659 3.6E-20 T 11-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Tbd_1895 30243fdbb54e5b68725ed84cd8cf2152 92 SUPERFAMILY SSF52091 9 91 7.85E-11 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_1895 30243fdbb54e5b68725ed84cd8cf2152 92 Pfam PF13466 STAS domain 10 87 2.6E-17 T 11-10-2018 IPR002645 STAS domain Tbd_1895 30243fdbb54e5b68725ed84cd8cf2152 92 Gene3D G3DSA:3.30.750.24 6 92 4.6E-9 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Gene3D G3DSA:3.40.1190.10 86 317 2.5E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 SUPERFAMILY SSF63418 7 102 3.14E-24 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 452 1.4E-134 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 8 453 33.976 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 391 7.0E-15 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Pfam PF01225 Mur ligase family, catalytic domain 30 100 1.3E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Gene3D G3DSA:3.40.1390.10 6 83 5.2E-23 T 11-10-2018 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 SUPERFAMILY SSF53623 105 319 8.9E-53 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 SUPERFAMILY SSF53244 320 451 2.29E-38 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Gene3D G3DSA:3.90.190.20 319 457 2.6E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0115 a2f3d4de95ddba96fea4d6766cc537e0 464 Pfam PF08245 Mur ligase middle domain 110 298 2.5E-49 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 SMART SM00244 21 185 1.7E-29 T 11-10-2018 IPR001107 Band 7 domain Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 SUPERFAMILY SSF117892 53 190 5.75E-31 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 Gene3D G3DSA:3.30.479.30 50 187 8.9E-25 T 11-10-2018 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 PIRSF PIRSF005651 1 293 1.2E-96 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 TIGRFAM TIGR01932 hflC: HflC protein 142 285 8.6E-51 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 PRINTS PR00721 Stomatin signature 77 98 4.0E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 PRINTS PR00721 Stomatin signature 28 50 4.0E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 PRINTS PR00721 Stomatin signature 161 179 4.0E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 PRINTS PR00721 Stomatin signature 180 201 4.0E-7 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0604 d6d52102c4ee7125933a3db6ef241044 293 Pfam PF01145 SPFH domain / Band 7 family 25 198 1.3E-28 T 11-10-2018 IPR001107 Band 7 domain Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 2.8E-94 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 Gene3D G3DSA:1.10.10.10 123 190 5.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 5.9E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 Pfam PF08281 Sigma-70, region 4 131 181 3.8E-18 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 Pfam PF04542 Sigma-70 region 2 25 92 9.3E-19 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 SUPERFAMILY SSF88659 125 186 5.61E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 Gene3D G3DSA:1.10.1740.10 1 121 7.0E-41 T 11-10-2018 Tbd_2095 4636cfd07fd038163c2c09aae4af0422 198 SUPERFAMILY SSF88946 3 109 2.04E-32 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.3E-66 T 11-10-2018 IPR023798 Ribosomal protein S7 domain Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.1E-65 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 PIRSF PIRSF002122 3 156 3.1E-57 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 Gene3D G3DSA:1.10.455.10 2 155 4.5E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.348 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tbd_0401 070fee151849331cb64dd2ddf8faaad5 156 SUPERFAMILY SSF47973 2 149 5.23E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 Pfam PF01545 Cation efflux family 10 203 4.3E-39 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 284 2.4E-20 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 SUPERFAMILY SSF160240 206 285 6.41E-19 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 Gene3D G3DSA:1.20.1510.10 4 202 7.7E-58 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 286 8.7E-69 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 SUPERFAMILY SSF161111 5 204 5.36E-54 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_1114 3fd38e83cf637ea3936c61ac0e76a321 305 Gene3D G3DSA:3.30.70.1350 203 288 3.2E-25 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Pfam PF00575 S1 RNA binding domain 661 732 2.4E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Pfam PF16921 Tex protein YqgF-like domain 338 463 1.1E-50 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Pfam PF12836 Helix-hairpin-helix motif 503 567 3.7E-26 T 11-10-2018 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SUPERFAMILY SSF47781 572 644 2.22E-19 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SUPERFAMILY SSF53098 333 481 1.29E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Pfam PF09371 Tex-like protein N-terminal domain 9 200 1.7E-64 T 11-10-2018 IPR018974 Tex-like protein, N-terminal Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SMART SM00316 661 732 1.7E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Gene3D G3DSA:1.10.150.310 511 642 5.3E-47 T 11-10-2018 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Gene3D G3DSA:1.10.10.650 3 109 7.2E-38 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SUPERFAMILY SSF158832 3 332 4.45E-107 T 11-10-2018 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Gene3D G3DSA:1.10.3500.10 112 510 1.3E-144 T 11-10-2018 IPR023323 Tex-like domain superfamily Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Gene3D G3DSA:2.40.50.140 643 735 2.1E-27 T 11-10-2018 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SUPERFAMILY SSF50249 649 737 3.21E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SUPERFAMILY SSF47781 482 568 1.06E-25 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_1945 b6f2407ec74d370053457be70bba5081 800 SMART SM00732 337 436 7.5E-32 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Tbd_1945 b6f2407ec74d370053457be70bba5081 800 Gene3D G3DSA:3.30.420.140 336 463 1.3E-144 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 SUPERFAMILY SSF88659 213 308 5.61E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Pfam PF04539 Sigma-70 region 3 162 237 5.5E-12 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Pfam PF04545 Sigma-70, region 4 250 303 3.2E-11 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 40 316 2.5E-131 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Gene3D G3DSA:1.10.601.10 2 151 1.5E-47 T 11-10-2018 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 106 119 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 PRINTS PR00046 Major sigma-70 factor signature 106 119 6.3E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 PRINTS PR00046 Major sigma-70 factor signature 254 266 6.3E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 PRINTS PR00046 Major sigma-70 factor signature 130 138 6.3E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 PRINTS PR00046 Major sigma-70 factor signature 275 290 6.3E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 PRINTS PR00046 Major sigma-70 factor signature 290 301 6.3E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Gene3D G3DSA:1.10.10.10 232 313 2.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 1 316 38.104 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Pfam PF00140 Sigma-70 factor, region 1.2 44 76 6.7E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Pfam PF04542 Sigma-70 region 2 82 151 4.1E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 Gene3D G3DSA:1.10.10.10 155 230 2.7E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 77 304 4.5E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 SUPERFAMILY SSF88946 44 152 3.53E-45 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 275 301 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0838 2b15e8cbb75f7a9529f3751b451fc8f7 316 SUPERFAMILY SSF88659 155 229 4.25E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1635 f215bd9ce66ba2d5f506fafa5c4bc54c 221 Gene3D G3DSA:2.60.40.4070 102 187 9.7E-32 T 11-10-2018 Tbd_1635 f215bd9ce66ba2d5f506fafa5c4bc54c 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 76 8.3E-26 T 11-10-2018 IPR005648 Flagellar hook capping protein Tbd_1635 f215bd9ce66ba2d5f506fafa5c4bc54c 221 Pfam PF13861 FlgD Tudor-like domain 85 218 1.0E-15 T 11-10-2018 IPR025963 FlgD Tudor-like domain Tbd_1635 f215bd9ce66ba2d5f506fafa5c4bc54c 221 Gene3D G3DSA:2.30.30.910 86 215 9.7E-32 T 11-10-2018 Tbd_1635 f215bd9ce66ba2d5f506fafa5c4bc54c 221 Pfam PF13860 FlgD Ig-like domain 109 178 1.2E-21 T 11-10-2018 IPR025965 FlgD Ig-like domain Tbd_2437 726e67a8c2f489f58b6c580cebe48de2 483 Pfam PF10150 Ribonuclease E/G family 117 387 1.2E-101 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Tbd_2437 726e67a8c2f489f58b6c580cebe48de2 483 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 4.2E-151 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Tbd_2437 726e67a8c2f489f58b6c580cebe48de2 483 Gene3D G3DSA:2.40.50.140 31 121 2.0E-29 T 11-10-2018 Tbd_2437 726e67a8c2f489f58b6c580cebe48de2 483 SUPERFAMILY SSF50249 40 121 2.45E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2437 726e67a8c2f489f58b6c580cebe48de2 483 SMART SM00316 37 115 7.4E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 Gene3D G3DSA:3.40.50.2020 9 303 1.7E-129 T 11-10-2018 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 6.4E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 Gene3D G3DSA:3.40.50.2020 150 291 1.7E-129 T 11-10-2018 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 315 48.729 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 SUPERFAMILY SSF53271 71 307 1.39E-63 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 SMART SM01400 6 123 1.0E-73 T 11-10-2018 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 3.2E-122 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_0387 d331acfb4fd091c0046d8d143015454e 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.9E-47 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_2623 4f27f46df98bb4a8138a96feadf84708 118 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 2.9E-38 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2623 4f27f46df98bb4a8138a96feadf84708 118 SUPERFAMILY SSF55239 12 115 7.85E-42 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2623 4f27f46df98bb4a8138a96feadf84708 118 SMART SM00961 18 115 2.8E-51 T 11-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2623 4f27f46df98bb4a8138a96feadf84708 118 Gene3D G3DSA:3.30.190.10 1 116 5.1E-43 T 11-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_1597 1fa794fad09be021d357e6e8c604c1ad 255 Gene3D G3DSA:2.40.10.220 132 255 8.0E-23 T 11-10-2018 Tbd_1597 1fa794fad09be021d357e6e8c604c1ad 255 Gene3D G3DSA:2.30.110.10 21 130 1.9E-10 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_1597 1fa794fad09be021d357e6e8c604c1ad 255 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 17 255 30.332 T 11-10-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 Tbd_1597 1fa794fad09be021d357e6e8c604c1ad 255 Pfam PF07317 Flagellar regulator YcgR 22 128 2.7E-28 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Tbd_1597 1fa794fad09be021d357e6e8c604c1ad 255 Pfam PF07238 PilZ domain 130 245 2.6E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Tbd_2034 be77c43475b283bc04c58eafa9a026fb 98 Gene3D G3DSA:1.10.760.10 26 96 8.1E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2034 be77c43475b283bc04c58eafa9a026fb 98 SUPERFAMILY SSF46626 15 97 2.81E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2034 be77c43475b283bc04c58eafa9a026fb 98 Pfam PF00034 Cytochrome c 28 98 4.4E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Gene3D G3DSA:3.40.50.300 537 643 3.9E-11 T 11-10-2018 Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 SUPERFAMILY SSF52540 8 872 3.02E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Gene3D G3DSA:3.40.50.300 341 483 1.2E-27 T 11-10-2018 Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Pfam PF12705 PD-(D/E)XK nuclease superfamily 927 1067 1.9E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 448 2.3E-42 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Pfam PF13361 UvrD-like helicase C-terminal domain 752 868 2.7E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tbd_0033 e3d1ca2e60a1a49c2e65879e2df515d8 1089 Gene3D G3DSA:3.40.50.300 728 884 1.2E-16 T 11-10-2018 Tbd_0738 57d39b4e5eec8d472801082a69b82208 347 Gene3D G3DSA:3.40.50.2000 16 173 1.5E-13 T 11-10-2018 Tbd_0738 57d39b4e5eec8d472801082a69b82208 347 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 98 313 9.3E-28 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tbd_0738 57d39b4e5eec8d472801082a69b82208 347 SUPERFAMILY SSF53756 22 337 3.3E-62 T 11-10-2018 Tbd_0738 57d39b4e5eec8d472801082a69b82208 347 Gene3D G3DSA:3.40.50.2000 183 339 1.5E-36 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SUPERFAMILY SSF50249 39 194 6.57E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:3.30.930.10 483 678 4.8E-53 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SMART SM00874 400 468 3.1E-24 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Pfam PF03483 B3/4 domain 211 384 3.3E-64 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:3.30.70.380 688 781 4.9E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Pfam PF03147 Ferredoxin-fold anticodon binding domain 687 780 1.3E-27 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:3.30.56.10 7 178 5.2E-66 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:3.30.56.10 400 473 2.5E-22 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Pfam PF03484 tRNA synthetase B5 domain 403 468 1.1E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SUPERFAMILY SSF54991 683 780 1.7E-27 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SUPERFAMILY SSF56037 195 394 2.48E-67 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:3.50.40.10 197 394 1.3E-72 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 780 1.4E-231 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Pfam PF01588 Putative tRNA binding domain 45 144 1.3E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Gene3D G3DSA:2.40.50.140 39 153 5.2E-66 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 774 45.786 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SMART SM00896 687 780 1.4E-39 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SMART SM00873 211 384 2.0E-87 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SUPERFAMILY SSF55681 464 676 7.95E-47 T 11-10-2018 Tbd_1012 dd3c4f0de4e4fd14d4902d49323e22ea 781 SUPERFAMILY SSF46955 402 472 2.66E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 SUPERFAMILY SSF55008 29 98 7.33E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 Gene3D G3DSA:3.30.70.100 29 100 7.0E-20 T 11-10-2018 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 15 99 1.7E-33 T 11-10-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 Pfam PF00403 Heavy-metal-associated domain 34 95 6.4E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 85 99 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 71 85 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 29 40 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 11 29 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 56 71 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_1340 77c185769785dc63f3c88b84f3f60db1 108 PRINTS PR00946 Mercury scavenger protein signature 40 56 7.9E-33 T 11-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 Tbd_0277 eaa6749d5693e407ed15b81c48c7f5a8 301 SUPERFAMILY SSF52540 2 222 5.75E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0277 eaa6749d5693e407ed15b81c48c7f5a8 301 Gene3D G3DSA:3.40.50.300 1 234 5.8E-75 T 11-10-2018 Tbd_0277 eaa6749d5693e407ed15b81c48c7f5a8 301 SMART SM00382 26 209 2.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0277 eaa6749d5693e407ed15b81c48c7f5a8 301 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0277 eaa6749d5693e407ed15b81c48c7f5a8 301 Pfam PF00005 ABC transporter 19 160 1.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0209 ec7b2701fbd142c5560743920ebbfcdb 319 SUPERFAMILY SSF64182 4 319 6.45E-44 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Tbd_0278 8b0f4044211e821a0618433e346bc2d8 200 Gene3D G3DSA:3.40.50.1820 1 198 2.2E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0278 8b0f4044211e821a0618433e346bc2d8 200 Pfam PF12146 Serine aminopeptidase, S33 39 136 1.2E-7 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Tbd_0278 8b0f4044211e821a0618433e346bc2d8 200 SUPERFAMILY SSF53474 4 195 1.77E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 72 5.8E-23 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 4.1E-12 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 4.1E-12 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 4.1E-12 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 4.1E-12 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 SUPERFAMILY SSF159127 1 72 3.79E-23 T 11-10-2018 IPR037254 HupF/HypC superfamily Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 11-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 Pfam PF01455 HupF/HypC family 1 67 8.9E-24 T 11-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tbd_1381 a7bdd0d398f990182400a42ccc083c62 76 Gene3D G3DSA:2.40.50.970 1 75 1.6E-23 T 11-10-2018 IPR037254 HupF/HypC superfamily Tbd_1376 ef6a7e3b101d950c57c5f6895534e518 420 Pfam PF02754 Cysteine-rich domain 306 394 8.9E-9 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_1376 ef6a7e3b101d950c57c5f6895534e518 420 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1376 ef6a7e3b101d950c57c5f6895534e518 420 SUPERFAMILY SSF46548 13 123 3.66E-13 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1376 ef6a7e3b101d950c57c5f6895534e518 420 Pfam PF13183 4Fe-4S dicluster domain 24 111 1.1E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:3.30.1480.10 1 131 1.3E-43 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF54814 201 278 4.9E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF47794 430 490 2.51E-14 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Pfam PF08529 NusA N-terminal domain 4 126 4.3E-38 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SMART SM00316 135 201 1.2E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:1.10.150.20 354 421 1.7E-27 T 11-10-2018 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 342 1.8E-127 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF50249 135 200 3.58E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF47794 355 417 4.24E-17 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 411 29.982 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SMART SM00322 231 294 25.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SMART SM00322 302 380 0.0027 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF54814 280 342 2.75E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Pfam PF14520 Helix-hairpin-helix domain 432 485 8.0E-10 T 11-10-2018 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:2.40.50.140 138 199 6.3E-21 T 11-10-2018 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:3.30.300.20 200 278 1.8E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:3.30.300.20 279 347 2.9E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Pfam PF00575 S1 RNA binding domain 136 195 1.8E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Pfam PF13184 NusA-like KH domain 231 298 7.5E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 SUPERFAMILY SSF69705 1 128 1.44E-40 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 366 415 4.5E-20 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 439 488 4.5E-16 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Tbd_0698 d24dc3f44a7fcb99ad7dcd36c8c6852e 492 Gene3D G3DSA:1.10.150.20 430 488 2.6E-20 T 11-10-2018 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 SMART SM00841 128 184 2.3E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 9.3E-60 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Gene3D G3DSA:2.40.50.140 64 126 7.0E-22 T 11-10-2018 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Gene3D G3DSA:2.30.30.30 1 62 1.7E-18 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 5.9E-20 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 8.2E-18 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 PIRSF PIRSF005901 1 186 2.2E-53 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 SMART SM01185 67 120 8.4E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 SUPERFAMILY SSF50249 127 185 1.4E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Gene3D G3DSA:2.40.50.140 127 186 4.1E-22 T 11-10-2018 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Pfam PF09285 Elongation factor P, C-terminal 128 184 2.0E-18 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 SUPERFAMILY SSF50104 1 63 5.01E-16 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 SUPERFAMILY SSF50249 65 126 3.77E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0857 7e2bd87d9d46f6e2578a29ad2a817845 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 45.176 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:3.20.20.450 690 946 5.4E-95 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:3.40.50.2300 144 319 1.0E-11 T 11-10-2018 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:3.40.50.2300 87 298 1.0E-11 T 11-10-2018 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:2.10.70.100 452 498 1.2E-16 T 11-10-2018 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SMART SM00052 686 934 3.0E-104 T 11-10-2018 IPR001633 EAL domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:3.30.70.270 509 689 2.1E-62 T 11-10-2018 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SMART SM00267 504 676 3.6E-71 T 11-10-2018 IPR000160 GGDEF domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Pfam PF00563 EAL domain 692 929 6.4E-69 T 11-10-2018 IPR001633 EAL domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Pfam PF00990 Diguanylate cyclase, GGDEF domain 515 672 1.4E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SUPERFAMILY SSF55785 390 495 8.72E-17 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SUPERFAMILY SSF55073 520 677 6.59E-51 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SMART SM00086 455 497 0.0013 T 11-10-2018 IPR001610 PAC motif Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Gene3D G3DSA:3.30.450.20 377 449 8.9E-21 T 11-10-2018 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 674 1.2E-43 T 11-10-2018 IPR000160 GGDEF domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 Pfam PF08447 PAS fold 404 491 1.3E-19 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 404 504 8.8E-6 T 11-10-2018 IPR000014 PAS domain Tbd_2428 5c7943a6cdee0b9dd1a65cdc51d61f8e 954 SUPERFAMILY SSF141868 691 941 9.55E-86 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 37.133 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 Gene3D G3DSA:3.10.25.10 204 307 4.6E-32 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 Pfam PF00551 Formyl transferase 1 180 4.1E-46 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 Gene3D G3DSA:3.40.50.170 1 203 7.1E-78 T 11-10-2018 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 299 1.9E-93 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 Pfam PF02911 Formyl transferase, C-terminal domain 201 299 2.6E-29 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 SUPERFAMILY SSF50486 202 307 6.91E-33 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Tbd_0015 2322baf44a7a4b25c6ba95f940a8c296 309 SUPERFAMILY SSF53328 1 204 8.37E-66 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 315 26.693 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 SUPERFAMILY SSF56042 137 300 1.06E-35 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 Pfam PF02769 AIR synthase related protein, C-terminal domain 144 297 3.6E-8 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 PIRSF PIRSF005303 1 315 8.6E-83 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 Gene3D G3DSA:3.30.1330.10 1 138 1.3E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 Gene3D G3DSA:3.90.650.10 140 316 2.9E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 SUPERFAMILY SSF55326 2 132 2.97E-32 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 315 2.8E-100 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Tbd_2193 da5fedf6285aefae6626725fd2ad48e9 317 Pfam PF00586 AIR synthase related protein, N-terminal domain 23 131 4.8E-25 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 Pfam PF13247 4Fe-4S dicluster domain 174 269 1.8E-36 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 SUPERFAMILY SSF54862 1 492 9.94E-170 T 11-10-2018 Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 Gene3D G3DSA:3.30.70.20 1 303 3.4E-96 T 11-10-2018 Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 2.1E-260 T 11-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 Gene3D G3DSA:1.10.3650.10 357 435 4.7E-27 T 11-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Tbd_1404 97f4ba63fe69e97060e2cc6ea25af1e6 522 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 357 437 2.1E-25 T 11-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Tbd_0560 f645902beecbe100ce4216fefc6fbaea 197 SUPERFAMILY SSF81452 10 196 1.57E-47 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0560 f645902beecbe100ce4216fefc6fbaea 197 Pfam PF00510 Cytochrome c oxidase subunit III 21 195 1.1E-13 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0560 f645902beecbe100ce4216fefc6fbaea 197 Gene3D G3DSA:1.20.120.80 18 197 4.0E-49 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.67 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 Gene3D G3DSA:3.30.70.600 1 102 4.8E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 SMART SM01403 7 101 9.7E-57 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0404 9cc3fe870ce4384a09a90b01da013852 102 SUPERFAMILY SSF54999 5 102 2.75E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tbd_0677 c2f57e64bca7a2c7493afd54a75ee38e 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 2.6E-21 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tbd_0677 c2f57e64bca7a2c7493afd54a75ee38e 162 SUPERFAMILY SSF55826 7 145 2.88E-24 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tbd_0677 c2f57e64bca7a2c7493afd54a75ee38e 162 Gene3D G3DSA:3.90.960.10 20 154 9.0E-31 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 Gene3D G3DSA:1.10.287.130 656 737 8.0E-18 T 11-10-2018 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SUPERFAMILY SSF47384 667 736 1.96E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 866 1.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 833 1.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 837 847 1.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 885 1.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SMART SM00388 672 738 1.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SUPERFAMILY SSF55781 478 649 3.71E-14 T 11-10-2018 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 886 1.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SMART SM00065 498 651 0.0048 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 Gene3D G3DSA:3.30.565.10 740 890 5.0E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SUPERFAMILY SSF55874 736 887 4.85E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 Gene3D G3DSA:3.30.450.40 484 652 1.3E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 Pfam PF00512 His Kinase A (phospho-acceptor) domain 673 736 8.9E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0903 f98834f5e9ee8dd06f482f1c4368ccdf 898 SMART SM00387 782 888 7.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0636 0060014adf704f5c3c0477de890035e2 559 SMART SM00267 373 542 1.5E-53 T 11-10-2018 IPR000160 GGDEF domain Tbd_0636 0060014adf704f5c3c0477de890035e2 559 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 538 3.9E-41 T 11-10-2018 IPR000160 GGDEF domain Tbd_0636 0060014adf704f5c3c0477de890035e2 559 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 541 1.4E-46 T 11-10-2018 IPR000160 GGDEF domain Tbd_0636 0060014adf704f5c3c0477de890035e2 559 Gene3D G3DSA:3.30.70.270 369 543 3.1E-53 T 11-10-2018 Tbd_0636 0060014adf704f5c3c0477de890035e2 559 Pfam PF05231 MASE1 56 334 4.1E-35 T 11-10-2018 IPR007895 MASE1 Tbd_0636 0060014adf704f5c3c0477de890035e2 559 SUPERFAMILY SSF55073 389 541 1.41E-45 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 Gene3D G3DSA:1.10.10.10 1 88 1.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 SUPERFAMILY SSF53850 88 265 1.99E-22 T 11-10-2018 Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 Gene3D G3DSA:3.40.190.10 92 174 3.0E-13 T 11-10-2018 Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 SUPERFAMILY SSF46785 1 81 4.54E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 Pfam PF03466 LysR substrate binding domain 99 270 5.7E-17 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_2328 a93153f62b472b79f59e6cd39fa4257f 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 6.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 Pfam PF13484 4Fe-4S double cluster binding domain 278 342 1.0E-20 T 11-10-2018 Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 SUPERFAMILY SSF46548 227 342 9.94E-20 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 279 290 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 99 435 2.4E-149 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 92 401 49.648 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Tbd_1520 aaf4474d08496e87a505ee8161b5fdb5 438 Pfam PF08331 Domain of unknown function (DUF1730) 147 226 1.4E-21 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Tbd_2591 301b1f7541605d836510181315b18492 687 Gene3D G3DSA:2.40.170.20 157 687 3.4E-70 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_2591 301b1f7541605d836510181315b18492 687 SUPERFAMILY SSF56935 30 681 5.13E-93 T 11-10-2018 Tbd_2591 301b1f7541605d836510181315b18492 687 Pfam PF00593 TonB dependent receptor 284 678 2.8E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_2591 301b1f7541605d836510181315b18492 687 Gene3D G3DSA:2.170.130.10 28 148 5.4E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_2591 301b1f7541605d836510181315b18492 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 144 8.7E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_2631 18cab5f7fd7e5c395c32c616552a6f89 157 Pfam PF01641 SelR domain 36 154 1.9E-44 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Tbd_2631 18cab5f7fd7e5c395c32c616552a6f89 157 Gene3D G3DSA:2.170.150.20 13 156 1.7E-51 T 11-10-2018 Tbd_2631 18cab5f7fd7e5c395c32c616552a6f89 157 SUPERFAMILY SSF51316 32 155 1.62E-52 T 11-10-2018 IPR011057 Mss4-like superfamily Tbd_2631 18cab5f7fd7e5c395c32c616552a6f89 157 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 33 155 4.3E-44 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Tbd_1364 1e929494fa34fbb49f51020db7e934f4 199 SUPERFAMILY SSF51197 23 196 2.33E-34 T 11-10-2018 Tbd_1364 1e929494fa34fbb49f51020db7e934f4 199 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 81 194 9.8E-15 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Tbd_1364 1e929494fa34fbb49f51020db7e934f4 199 Gene3D G3DSA:2.60.120.590 21 199 4.3E-31 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 SUPERFAMILY SSF55785 355 471 8.22E-17 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 SUPERFAMILY SSF55073 484 647 1.33E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 478 644 1.4E-44 T 11-10-2018 IPR000160 GGDEF domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Pfam PF08447 PAS fold 378 462 7.2E-16 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 SMART SM01079 78 269 1.9E-79 T 11-10-2018 IPR006189 CHASE domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 480 640 1.0E-46 T 11-10-2018 IPR000160 GGDEF domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 348 472 4.1E-8 T 11-10-2018 IPR000014 PAS domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Pfam PF03924 CHASE domain 83 267 7.4E-62 T 11-10-2018 IPR006189 CHASE domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Gene3D G3DSA:3.30.70.270 474 654 6.2E-59 T 11-10-2018 Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 SMART SM00267 468 645 1.2E-59 T 11-10-2018 IPR000160 GGDEF domain Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Gene3D G3DSA:3.30.450.20 350 466 1.7E-25 T 11-10-2018 Tbd_1411 eaec3481339e9c181da86c1ba22b2cd9 656 Gene3D G3DSA:3.30.450.350 83 297 5.5E-38 T 11-10-2018 Tbd_1732 c71c61b0afa06949df1d1f3d4053de11 503 SUPERFAMILY SSF53335 5 157 1.31E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1732 c71c61b0afa06949df1d1f3d4053de11 503 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 17 233 0.0054 T 11-10-2018 IPR020803 Polyketide synthase, methyltransferase domain Tbd_1732 c71c61b0afa06949df1d1f3d4053de11 503 Pfam PF13649 Methyltransferase domain 44 141 6.1E-14 T 11-10-2018 Tbd_1732 c71c61b0afa06949df1d1f3d4053de11 503 Gene3D G3DSA:3.40.50.150 4 171 2.1E-24 T 11-10-2018 Tbd_1732 c71c61b0afa06949df1d1f3d4053de11 503 Pfam PF10119 Predicted methyltransferase regulatory domain 208 289 1.2E-15 T 11-10-2018 IPR018773 Methyltransferase regulatory domain, predicted Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 35 510 1.9E-199 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 PIRSF PIRSF006281 19 514 1.2E-198 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 SUPERFAMILY SSF81296 407 513 2.8E-27 T 11-10-2018 IPR014756 Immunoglobulin E-set Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 SUPERFAMILY SSF74650 35 406 1.85E-156 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 Gene3D G3DSA:2.60.40.10 408 514 1.0E-32 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_1311 a19d2babc3f17af046c3993e6f8ad4d1 514 Gene3D G3DSA:2.70.98.10 34 407 7.2E-164 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Tbd_0186 834c0ae9ed16d7b49fd50fb17c558888 670 Pfam PF05140 ResB-like family 19 658 1.7E-154 T 11-10-2018 IPR007816 ResB-like domain Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 SUPERFAMILY SSF54966 2 137 9.95E-48 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 143 440 6.4E-115 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 186 194 - T 11-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 SUPERFAMILY SSF51649 138 455 5.23E-112 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 12 130 3.5E-38 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 1 459 78.471 T 11-10-2018 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 Gene3D G3DSA:3.20.20.110 137 439 3.9E-128 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2638 34f64f9f6a827832617f5bf51916dec4 459 Gene3D G3DSA:3.30.70.150 5 136 6.7E-49 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_0568 ed07418cc604345951236d3a22514b23 518 Gene3D G3DSA:1.25.40.10 240 498 6.2E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0568 ed07418cc604345951236d3a22514b23 518 Gene3D G3DSA:3.30.2010.10 98 168 1.4E-8 T 11-10-2018 Tbd_0568 ed07418cc604345951236d3a22514b23 518 Pfam PF01435 Peptidase family M48 89 274 1.3E-35 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_0568 ed07418cc604345951236d3a22514b23 518 SUPERFAMILY SSF48452 289 449 1.83E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 PIRSF PIRSF000094 25 284 1.4E-111 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 SUPERFAMILY SSF51735 30 277 1.3E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 240 260 1.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 222 1.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 37 277 1.3E-83 T 11-10-2018 Tbd_1672 6390c30ddcb3d51f91656b024db52f55 284 Gene3D G3DSA:3.40.50.720 25 281 2.6E-54 T 11-10-2018 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 SUPERFAMILY SSF53383 21 369 2.31E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 Gene3D G3DSA:3.40.640.10 54 278 1.9E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 230 239 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 369 62.093 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 Pfam PF00155 Aminotransferase class I and II 41 357 7.7E-49 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 Gene3D G3DSA:3.90.1150.10 30 362 1.9E-110 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0952 43e4e1bd0cc6d57e02b917c7a678a356 384 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 368 7.2E-105 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 Pfam PF00733 Asparagine synthase 221 602 1.1E-73 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 SUPERFAMILY SSF56235 87 204 2.21E-17 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 PIRSF PIRSF001589 80 606 1.0E-83 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 Pfam PF13537 Glutamine amidotransferase domain 87 147 9.5E-8 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 Gene3D G3DSA:3.60.20.10 69 203 8.5E-17 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0298 d66e735694588ceec1a8bfbcebe08e81 606 SUPERFAMILY SSF52402 209 595 7.82E-62 T 11-10-2018 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 SUPERFAMILY SSF74731 2 116 2.75E-48 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 9.0E-13 T 11-10-2018 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 Gene3D G3DSA:1.10.720.90 2 55 6.2E-25 T 11-10-2018 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.141 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 Gene3D G3DSA:1.10.1900.20 56 119 4.0E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 Pfam PF00453 Ribosomal protein L20 3 109 2.2E-47 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.1E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-36 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-36 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1010 61efab3ca6531ad3701b24c10b904243 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-36 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 Pfam PF06969 HemN C-terminal domain 316 379 6.8E-13 T 11-10-2018 IPR010723 HemN, C-terminal Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 SMART SM00729 18 233 2.7E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 19 351 4.1E-103 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 SUPERFAMILY SSF102114 15 390 5.23E-108 T 11-10-2018 Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 Pfam PF04055 Radical SAM superfamily 23 187 1.3E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0479 4878bac556c8c2d25942ac0140befeaa 392 Gene3D G3DSA:3.80.30.20 7 315 8.3E-97 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Gene3D G3DSA:1.10.220.30 90 193 3.6E-12 T 11-10-2018 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Pfam PF01706 FliG C-terminal domain 213 317 2.2E-21 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 SUPERFAMILY SSF48029 6 110 7.32E-15 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Gene3D G3DSA:1.10.220.30 194 325 1.2E-24 T 11-10-2018 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Pfam PF14842 FliG N-terminal domain 9 104 1.4E-21 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Gene3D G3DSA:1.10.220.30 4 86 3.5E-14 T 11-10-2018 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 Pfam PF14841 FliG middle domain 116 182 3.3E-12 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 SUPERFAMILY SSF48029 116 317 2.35E-36 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 115 138 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 221 241 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 243 263 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 36 62 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 190 215 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 7 23 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_1089 606eee6a0fd75cbc00f18ee82006096d 325 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 293 2.0E-31 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 Gene3D G3DSA:3.30.830.10 241 433 2.4E-51 T 11-10-2018 Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 SUPERFAMILY SSF63411 22 228 4.89E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 SUPERFAMILY SSF63411 254 432 1.2E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 Gene3D G3DSA:3.30.830.10 25 236 1.9E-43 T 11-10-2018 Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 Pfam PF05193 Peptidase M16 inactive domain 189 365 2.8E-27 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Tbd_0378 8c436c5b2bdd0e21c68e9eec462d800e 435 Pfam PF00675 Insulinase (Peptidase family M16) 39 178 3.6E-7 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 Gene3D G3DSA:3.30.2320.50 18 125 2.4E-25 T 11-10-2018 Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 17 129 19.554 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 PIRSF PIRSF004761 17 132 4.2E-25 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 50 92 - T 11-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 18 127 4.5E-26 T 11-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tbd_1382 b2231e90c4aa76cacf993accb737bb9a 138 Gene3D G3DSA:2.20.28.10 85 118 2.4E-25 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Gene3D G3DSA:3.90.640.10 236 301 3.2E-131 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 378 1.7E-151 T 11-10-2018 IPR020823 Cell division protein FtsA Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Pfam PF14450 Cell division protein FtsA 12 196 2.7E-12 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Gene3D G3DSA:3.30.420.40 198 353 3.2E-131 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 SUPERFAMILY SSF53067 199 378 4.32E-51 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 PIRSF PIRSF003101 2 411 4.9E-165 T 11-10-2018 IPR020823 Cell division protein FtsA Tbd_0124 71eaa794e4592d01d587187608cf1646 411 SUPERFAMILY SSF53067 10 198 4.75E-65 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Pfam PF14450 Cell division protein FtsA 208 375 4.8E-26 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 411 31.827 T 11-10-2018 IPR020823 Cell division protein FtsA Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Gene3D G3DSA:3.30.420.40 14 373 3.2E-131 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Gene3D G3DSA:3.30.1490.110 88 170 3.2E-131 T 11-10-2018 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 Pfam PF02491 SHS2 domain inserted in FTSA 86 163 1.0E-33 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tbd_0124 71eaa794e4592d01d587187608cf1646 411 SMART SM00842 11 197 5.7E-112 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tbd_2418 f464b08724386fb0190be29100e2507d 246 Gene3D G3DSA:3.20.20.10 14 245 6.2E-84 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_2418 f464b08724386fb0190be29100e2507d 246 SUPERFAMILY SSF51419 20 240 1.23E-76 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_2418 f464b08724386fb0190be29100e2507d 246 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 23 241 32.542 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_2418 f464b08724386fb0190be29100e2507d 246 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 25 242 3.9E-68 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_2418 f464b08724386fb0190be29100e2507d 246 PIRSF PIRSF004848 17 246 1.4E-69 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_2418 f464b08724386fb0190be29100e2507d 246 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 93 107 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tbd_2418 f464b08724386fb0190be29100e2507d 246 Pfam PF01168 Alanine racemase, N-terminal domain 27 242 8.1E-34 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 SUPERFAMILY SSF143414 20 106 1.44E-26 T 11-10-2018 IPR037233 CcmK-like superfamily Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 Pfam PF00936 BMC domain 20 95 4.1E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 Gene3D G3DSA:3.30.70.1710 6 116 1.5E-34 T 11-10-2018 Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 20 81 9.0E-20 T 11-10-2018 Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 SMART SM00877 19 96 4.5E-29 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2644 2dc0dab18f282c8841b17def67bcf11c 124 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 37 56 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 SUPERFAMILY SSF52768 9 289 2.88E-66 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 PRINTS PR00116 Arginase signature 171 189 5.0E-29 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 PRINTS PR00116 Arginase signature 220 249 5.0E-29 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 PRINTS PR00116 Arginase signature 91 106 5.0E-29 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 PRINTS PR00116 Arginase signature 117 144 5.0E-29 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 Pfam PF00491 Arginase family 9 290 3.9E-59 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 Gene3D G3DSA:3.40.800.10 8 294 1.8E-78 T 11-10-2018 Tbd_0069 d229074834092a6bf8b8a5fee3e60606 301 ProSitePatterns PS01053 Arginase family signature. 223 244 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Tbd_0984 3a672af9591f6588749a99375a72ada9 254 SUPERFAMILY SSF56281 1 243 1.97E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0984 3a672af9591f6588749a99375a72ada9 254 Pfam PF12706 Beta-lactamase superfamily domain 27 168 2.2E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0984 3a672af9591f6588749a99375a72ada9 254 SMART SM00849 17 199 5.5E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0984 3a672af9591f6588749a99375a72ada9 254 Gene3D G3DSA:3.60.15.10 1 252 1.9E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0984 3a672af9591f6588749a99375a72ada9 254 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 7.1E-7 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Tbd_0984 3a672af9591f6588749a99375a72ada9 254 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 7.1E-7 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Tbd_1788 99d9407ed7754bc3ead8e8b239e07f03 203 SUPERFAMILY SSF53649 12 124 6.54E-9 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_1788 99d9407ed7754bc3ead8e8b239e07f03 203 Gene3D G3DSA:3.40.720.10 6 191 5.8E-15 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tbd_1788 99d9407ed7754bc3ead8e8b239e07f03 203 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 13 129 1.3E-5 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Tbd_0424 22e738330ee8e273a02baa84360a9548 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.6E-44 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0424 22e738330ee8e273a02baa84360a9548 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.61 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Tbd_0424 22e738330ee8e273a02baa84360a9548 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 2.0E-25 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P Tbd_0424 22e738330ee8e273a02baa84360a9548 144 SUPERFAMILY SSF52080 4 142 1.11E-40 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Tbd_0424 22e738330ee8e273a02baa84360a9548 144 Gene3D G3DSA:3.100.10.10 68 144 1.1E-9 T 11-10-2018 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 Gene3D G3DSA:2.102.10.10 395 503 2.0E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 SUPERFAMILY SSF51905 27 374 4.79E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 Pfam PF01266 FAD dependent oxidoreductase 28 364 8.0E-38 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 Gene3D G3DSA:3.50.50.60 28 366 1.2E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 SUPERFAMILY SSF50022 411 495 5.5E-26 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 Gene3D G3DSA:3.30.9.10 121 326 1.2E-46 T 11-10-2018 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 Pfam PF00355 Rieske [2Fe-2S] domain 413 490 3.2E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 478 490 1.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 445 456 1.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Tbd_1235 45b9d5fd58d4e4a696af0d5857b0b345 504 PRINTS PR00162 Rieske 2Fe-2S subunit signature 466 478 1.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 415 1.3E-144 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 353 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 Gene3D G3DSA:3.40.605.10 14 422 8.3E-165 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 Pfam PF00171 Aldehyde dehydrogenase family 13 278 3.3E-17 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 Pfam PF00171 Aldehyde dehydrogenase family 318 382 7.1E-7 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 425 41.841 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 PIRSF PIRSF000151 1 426 1.9E-174 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 SUPERFAMILY SSF53720 8 425 2.09E-119 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tbd_2442 180735257c78ea91d9084186bcd9584c 426 Gene3D G3DSA:3.40.309.10 228 383 8.3E-165 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 ProSitePatterns PS00585 Ribosomal protein S5 signature. 33 65 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 33.848 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 79 6.1E-24 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 162 7.0E-31 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 168 2.4E-63 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 SUPERFAMILY SSF54211 84 164 5.06E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 Gene3D G3DSA:3.30.160.20 7 78 4.7E-25 T 11-10-2018 Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 Gene3D G3DSA:3.30.230.10 79 171 2.6E-37 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0422 c43f66009b8a86447d190c82ca4e72e1 171 SUPERFAMILY SSF54768 12 81 1.36E-20 T 11-10-2018 Tbd_2600 bd1b67751ad8a0c49738d28409338eda 141 Pfam PF06146 Phosphate-starvation-inducible E 50 115 1.6E-18 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Tbd_2600 bd1b67751ad8a0c49738d28409338eda 141 PIRSF PIRSF029598 1 134 4.6E-32 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 ProSitePatterns PS00622 LuxR-type HTH domain signature. 203 230 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 TIGRFAM TIGR03020 EpsA: transcriptional regulator EpsA 7 244 2.9E-99 T 11-10-2018 IPR017470 Transcription regulator EpsA Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 Pfam PF00196 Bacterial regulatory proteins, luxR family 190 242 2.3E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 Gene3D G3DSA:1.10.10.10 184 249 3.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 219 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 231 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 203 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 SMART SM00421 186 243 4.5E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0351 89078c6e791114b5b4e52c53854c337d 258 SUPERFAMILY SSF46894 181 249 2.18E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 297 43.724 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 SUPERFAMILY SSF52374 7 294 3.38E-87 T 11-10-2018 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 Gene3D G3DSA:3.40.50.620 7 291 4.1E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 7 278 2.3E-117 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 240 1.4E-42 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 Gene3D G3DSA:3.40.50.620 81 225 4.1E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 3.0E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 3.0E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 3.0E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_2709 fcaa157fc33beae09c69889397f180e3 301 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 3.0E-13 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 SUPERFAMILY SSF51735 88 276 7.25E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 Gene3D G3DSA:3.30.70.260 310 389 3.5E-18 T 11-10-2018 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 276 1.1E-38 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 Gene3D G3DSA:3.40.50.720 31 304 1.4E-69 T 11-10-2018 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 308 1.0E-16 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 SUPERFAMILY SSF52283 30 106 3.59E-16 T 11-10-2018 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 Gene3D G3DSA:3.40.50.720 86 280 1.4E-69 T 11-10-2018 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 SUPERFAMILY SSF55021 310 389 1.29E-14 T 11-10-2018 Tbd_0950 0ced9b624f48cf7b7a9a30455b438693 391 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 142 169 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Tbd_0008 5925acc5347ceb44a2fb234d99f7b090 380 SUPERFAMILY SSF52821 256 376 2.75E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0008 5925acc5347ceb44a2fb234d99f7b090 380 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 33 244 1.0E-8 T 11-10-2018 Tbd_0008 5925acc5347ceb44a2fb234d99f7b090 380 Gene3D G3DSA:3.40.250.10 245 378 3.8E-21 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0008 5925acc5347ceb44a2fb234d99f7b090 380 SMART SM00450 264 374 5.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0008 5925acc5347ceb44a2fb234d99f7b090 380 Pfam PF00581 Rhodanese-like domain 271 371 5.4E-14 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 SUPERFAMILY SSF46609 33 125 1.7E-29 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 Gene3D G3DSA:2.40.500.20 125 234 1.5E-33 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 198 205 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PRINTS PR01703 Manganese superoxide dismutase signature 64 77 4.4E-20 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PRINTS PR01703 Manganese superoxide dismutase signature 43 54 4.4E-20 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PRINTS PR01703 Manganese superoxide dismutase signature 107 120 4.4E-20 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PRINTS PR01703 Manganese superoxide dismutase signature 160 168 4.4E-20 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PRINTS PR01703 Manganese superoxide dismutase signature 196 208 4.4E-20 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 133 231 3.2E-29 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 Gene3D G3DSA:1.10.287.990 57 124 1.5E-18 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 PIRSF PIRSF000349 13 234 1.4E-65 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 40 123 7.0E-24 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_2256 2cf79f9da645fdcdae61fc9d23503621 234 SUPERFAMILY SSF54719 127 233 3.27E-35 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 Gene3D G3DSA:1.20.58.220 119 232 3.6E-33 T 11-10-2018 IPR038078 PhoU-like domain superfamily Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 Pfam PF01895 PhoU domain 22 108 4.0E-20 T 11-10-2018 IPR026022 PhoU domain Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 Pfam PF01895 PhoU domain 128 211 1.8E-16 T 11-10-2018 IPR026022 PhoU domain Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 PIRSF PIRSF003107 3 225 1.1E-65 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 2.6E-71 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 Gene3D G3DSA:1.20.58.220 2 117 2.4E-41 T 11-10-2018 IPR038078 PhoU-like domain superfamily Tbd_0025 af1901c4ff84d3e0d51ccd5f156b6203 233 SUPERFAMILY SSF109755 7 230 8.48E-71 T 11-10-2018 Tbd_0673 dd629a187d4169a207705bf50a937fa8 91 Gene3D G3DSA:3.30.2310.20 29 91 4.6E-16 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tbd_0673 dd629a187d4169a207705bf50a937fa8 91 SUPERFAMILY SSF143011 52 91 7.72E-11 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tbd_0673 dd629a187d4169a207705bf50a937fa8 91 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 53 91 2.3E-10 T 11-10-2018 IPR007711 Toxin HigB-1 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 Pfam PF01797 Transposase IS200 like 14 120 7.2E-14 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 SUPERFAMILY SSF48295 242 278 5.23E-5 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 Gene3D G3DSA:3.30.70.1290 1 162 1.3E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 SUPERFAMILY SSF143422 1 129 1.31E-25 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 Pfam PF13518 Helix-turn-helix domain 244 278 2.3E-7 T 11-10-2018 Tbd_1967 bc100b02eb9f96b1d916cb07cdf69a2f 282 SMART SM01321 9 123 2.9E-41 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 SUPERFAMILY SSF55031 190 299 1.47E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 Gene3D G3DSA:3.40.630.10 19 373 6.9E-128 T 11-10-2018 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 Pfam PF07687 Peptidase dimerisation domain 186 293 4.7E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 13 386 52.344 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 SUPERFAMILY SSF53187 12 385 1.96E-65 T 11-10-2018 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 Pfam PF01546 Peptidase family M20/M25/M40 73 382 3.3E-42 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 Gene3D G3DSA:3.30.70.360 190 303 6.9E-128 T 11-10-2018 Tbd_1271 8804a9d7aaad1537df84755f400b8f69 392 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 17 384 4.5E-165 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Tbd_2683 85ec802fd08804db48b7325fb5de7568 478 SUPERFAMILY SSF52540 1 375 5.28E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2683 85ec802fd08804db48b7325fb5de7568 478 Gene3D G3DSA:3.40.50.300 238 398 5.5E-17 T 11-10-2018 Tbd_2683 85ec802fd08804db48b7325fb5de7568 478 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 364 5.4E-24 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_2683 85ec802fd08804db48b7325fb5de7568 478 Gene3D G3DSA:3.40.50.300 1 128 8.5E-16 T 11-10-2018 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Gene3D G3DSA:3.30.310.50 376 451 1.6E-22 T 11-10-2018 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 448 1.5E-14 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 450 46.922 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 SUPERFAMILY SSF53738 264 372 2.16E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 448 1.5E-184 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 141 1.6E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 SUPERFAMILY SSF53738 163 262 2.63E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Gene3D G3DSA:3.40.120.10 180 367 7.7E-61 T 11-10-2018 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 6.8E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 6.8E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 6.8E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 SUPERFAMILY SSF55957 363 451 6.54E-20 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Gene3D G3DSA:3.40.120.10 2 160 5.4E-49 T 11-10-2018 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 260 1.5E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Gene3D G3DSA:3.40.120.10 263 345 7.7E-61 T 11-10-2018 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 2.9E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_1135 76416a7afacf55ff9ede0cb45bc1240b 458 SUPERFAMILY SSF53738 2 187 1.22E-49 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 Gene3D G3DSA:3.90.650.10 139 312 1.5E-69 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 2 301 1.9E-129 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 SUPERFAMILY SSF55326 2 137 1.79E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 Pfam PF02769 AIR synthase related protein, C-terminal domain 144 305 9.5E-38 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 Gene3D G3DSA:3.30.1330.10 1 137 9.7E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 SUPERFAMILY SSF56042 139 307 3.44E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 131 7.0E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Tbd_2667 3263aa5223057cc4fb4838541f49737e 312 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 311 41.045 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 600 1.1E-210 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 SUPERFAMILY SSF46589 847 911 5.23E-17 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 SUPERFAMILY SSF50677 192 342 4.84E-59 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:3.90.740.10 239 284 3.8E-6 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:1.10.287.380 840 912 7.5E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 PRINTS PR00986 Valyl-tRNA synthetase signature 444 465 4.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 4.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 4.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 4.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 PRINTS PR00986 Valyl-tRNA synthetase signature 475 493 4.4E-37 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:3.40.50.620 4 201 8.4E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:3.90.740.10 202 238 6.1E-7 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 847 911 8.1E-20 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 SUPERFAMILY SSF47323 611 862 5.98E-69 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 SUPERFAMILY SSF52374 3 610 9.39E-141 T 11-10-2018 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 TIGRFAM TIGR00422 valS: valine--tRNA ligase 4 893 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:1.10.730.10 550 787 3.8E-73 T 11-10-2018 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 912 15.845 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Pfam PF08264 Anticodon-binding domain of tRNA 644 795 1.2E-42 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tbd_0577 2cf87f7b54eec091e74106c1d21c0483 912 Gene3D G3DSA:3.40.50.620 290 524 7.5E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 Gene3D G3DSA:3.90.20.20 13 114 1.1E-25 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 SUPERFAMILY SSF51064 118 172 1.57E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 Gene3D G3DSA:2.30.22.10 116 170 8.4E-23 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 Pfam PF01025 GrpE 16 170 1.5E-46 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 Hamap MF_01151 Protein GrpE [grpE]. 2 170 19.276 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 PRINTS PR00773 GrpE protein signature 71 86 4.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 PRINTS PR00773 GrpE protein signature 149 168 4.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 PRINTS PR00773 GrpE protein signature 43 59 4.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 PRINTS PR00773 GrpE protein signature 123 138 4.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 SUPERFAMILY SSF58014 22 114 5.36E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tbd_1537 ad58cb7180f6ee124d2036d6be00a963 173 ProSitePatterns PS01071 grpE protein signature. 126 168 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tbd_2227 685f19a18230586dba259f489c7f070d 430 SUPERFAMILY SSF55785 6 112 1.41E-11 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2227 685f19a18230586dba259f489c7f070d 430 SUPERFAMILY SSF52540 131 370 7.27E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2227 685f19a18230586dba259f489c7f070d 430 SMART SM00382 151 294 6.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2227 685f19a18230586dba259f489c7f070d 430 Pfam PF08448 PAS fold 14 108 4.1E-9 T 11-10-2018 IPR013656 PAS fold-4 Tbd_2227 685f19a18230586dba259f489c7f070d 430 Pfam PF00158 Sigma-54 interaction domain 131 296 5.7E-63 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_2227 685f19a18230586dba259f489c7f070d 430 Gene3D G3DSA:3.30.450.20 4 112 3.1E-9 T 11-10-2018 Tbd_2227 685f19a18230586dba259f489c7f070d 430 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 217 232 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_2227 685f19a18230586dba259f489c7f070d 430 Pfam PF02954 Bacterial regulatory protein, Fis family 387 427 1.1E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2227 685f19a18230586dba259f489c7f070d 430 Gene3D G3DSA:1.10.10.60 386 429 1.2E-11 T 11-10-2018 Tbd_2227 685f19a18230586dba259f489c7f070d 430 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tbd_2227 685f19a18230586dba259f489c7f070d 430 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 430 5.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2227 685f19a18230586dba259f489c7f070d 430 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 393 410 5.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_2227 685f19a18230586dba259f489c7f070d 430 Gene3D G3DSA:1.10.8.60 302 380 3.2E-19 T 11-10-2018 Tbd_2227 685f19a18230586dba259f489c7f070d 430 SUPERFAMILY SSF46689 343 429 1.31E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2227 685f19a18230586dba259f489c7f070d 430 SMART SM00091 4 70 0.0012 T 11-10-2018 IPR000014 PAS domain Tbd_2227 685f19a18230586dba259f489c7f070d 430 Gene3D G3DSA:3.40.50.300 123 301 6.4E-61 T 11-10-2018 Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 Pfam PF02576 RimP N-terminal domain 27 93 7.1E-17 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 SUPERFAMILY SSF75420 23 93 2.22E-15 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 Pfam PF17384 RimP C-terminal SH3 domain 96 159 3.6E-14 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 21 161 20.913 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 Gene3D G3DSA:3.30.300.70 21 90 8.1E-12 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Tbd_0699 4553747cc4926b7aaa81f91532185fd8 161 SUPERFAMILY SSF74942 94 159 1.1E-14 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Tbd_0288 21df678c3dd2eddfe6372ae98350f373 354 Pfam PF13480 Acetyltransferase (GNAT) domain 182 295 2.2E-18 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Tbd_0288 21df678c3dd2eddfe6372ae98350f373 354 SUPERFAMILY SSF55729 22 125 4.17E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0288 21df678c3dd2eddfe6372ae98350f373 354 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 26 354 1.8E-164 T 11-10-2018 IPR017469 PEP-CTERM system-associated, FemAB-related Tbd_0288 21df678c3dd2eddfe6372ae98350f373 354 Gene3D G3DSA:3.40.630.30 149 301 1.7E-17 T 11-10-2018 Tbd_0288 21df678c3dd2eddfe6372ae98350f373 354 SUPERFAMILY SSF55729 155 313 8.18E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 TIGRFAM TIGR00876 tal_mycobact: transaldolase 12 356 2.1E-104 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 PIRSF PIRSF036915 1 359 7.2E-141 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 ProSitePatterns PS00958 Transaldolase active site. 136 153 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 ProSitePatterns PS01054 Transaldolase signature 1. 40 48 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 Gene3D G3DSA:3.20.20.70 1 359 1.7E-147 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 358 1.5E-85 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 Hamap MF_00493 Transaldolase [tal]. 1 359 135.037 T 11-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tbd_0665 936dedd83760cba1dc3452b35e4d83ff 359 SUPERFAMILY SSF51569 6 358 5.49E-75 T 11-10-2018 Tbd_2183 5513026998e5aaf1bc6a6e268c5f96f7 150 Gene3D G3DSA:3.30.1050.10 38 134 6.1E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Tbd_2183 5513026998e5aaf1bc6a6e268c5f96f7 150 SUPERFAMILY SSF55718 42 130 3.3E-17 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Tbd_2183 5513026998e5aaf1bc6a6e268c5f96f7 150 Pfam PF02036 SCP-2 sterol transfer family 44 125 1.3E-13 T 11-10-2018 IPR003033 SCP2 sterol-binding domain Tbd_2158 86f3da1b21a92ae9a812811b6fefccfb 264 Pfam PF14451 Mut7-C ubiquitin 13 93 7.7E-39 T 11-10-2018 IPR027798 Ubiquitin Mut7-C domain Tbd_2158 86f3da1b21a92ae9a812811b6fefccfb 264 Gene3D G3DSA:3.10.20.30 9 90 5.3E-6 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_2158 86f3da1b21a92ae9a812811b6fefccfb 264 SUPERFAMILY SSF54285 33 87 6.54E-8 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tbd_2158 86f3da1b21a92ae9a812811b6fefccfb 264 Pfam PF01927 Mut7-C RNAse domain 108 251 6.6E-52 T 11-10-2018 IPR002782 Mut7-C RNAse domain Tbd_0697 7799461267799975e64db28cb29096a9 922 Pfam PF00009 Elongation factor Tu GTP binding domain 427 583 1.5E-33 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tbd_0697 7799461267799975e64db28cb29096a9 922 SUPERFAMILY SSF52156 700 829 1.96E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tbd_0697 7799461267799975e64db28cb29096a9 922 Gene3D G3DSA:3.40.50.10050 717 823 5.1E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tbd_0697 7799461267799975e64db28cb29096a9 922 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 425 581 5.8E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0697 7799461267799975e64db28cb29096a9 922 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 1.5E-12 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Tbd_0697 7799461267799975e64db28cb29096a9 922 Pfam PF11987 Translation-initiation factor 2 708 812 3.8E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Tbd_0697 7799461267799975e64db28cb29096a9 922 SUPERFAMILY SSF46955 1 48 2.75E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_0697 7799461267799975e64db28cb29096a9 922 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 920 17.602 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tbd_0697 7799461267799975e64db28cb29096a9 922 Gene3D G3DSA:2.40.30.10 594 712 3.9E-39 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 ProSitePatterns PS01176 Initiation factor 2 signature. 873 895 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tbd_0697 7799461267799975e64db28cb29096a9 922 SUPERFAMILY SSF50447 595 677 3.3E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0697 7799461267799975e64db28cb29096a9 922 PRINTS PR00449 Transforming protein P21 ras signature 563 585 2.0E-5 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 PRINTS PR00449 Transforming protein P21 ras signature 464 486 2.0E-5 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 PRINTS PR00449 Transforming protein P21 ras signature 522 535 2.0E-5 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 PRINTS PR00449 Transforming protein P21 ras signature 425 446 2.0E-5 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 340 921 6.5E-263 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tbd_0697 7799461267799975e64db28cb29096a9 922 SUPERFAMILY SSF52540 420 593 1.18E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0697 7799461267799975e64db28cb29096a9 922 Gene3D G3DSA:2.40.30.10 824 921 3.3E-34 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 Gene3D G3DSA:3.40.50.300 419 593 4.0E-71 T 11-10-2018 Tbd_0697 7799461267799975e64db28cb29096a9 922 SUPERFAMILY SSF50447 824 920 5.41E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0697 7799461267799975e64db28cb29096a9 922 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 345 395 5.0E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Tbd_2788 11ff246986d79c5de1ca3645f21c3805 195 SUPERFAMILY SSF52833 53 181 1.3E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2788 11ff246986d79c5de1ca3645f21c3805 195 Gene3D G3DSA:3.40.30.10 42 183 3.7E-27 T 11-10-2018 Tbd_2788 11ff246986d79c5de1ca3645f21c3805 195 Pfam PF08534 Redoxin 58 100 1.2E-9 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tbd_2788 11ff246986d79c5de1ca3645f21c3805 195 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 127 5.1E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 SUPERFAMILY SSF48300 5 63 1.23E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 127 1.0E-27 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 Gene3D G3DSA:1.20.5.710 3 56 3.4E-21 T 11-10-2018 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 SUPERFAMILY SSF54736 56 127 4.71E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 Gene3D G3DSA:3.30.1390.10 57 127 5.8E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 127 25.582 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 1.6E-48 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0397 2baa3ecb66581a652056429e0a774dd0 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 1.2E-18 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 261 2.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SUPERFAMILY SSF55874 250 422 7.47E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Gene3D G3DSA:3.40.50.2300 572 703 1.2E-36 T 11-10-2018 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Pfam PF01627 Hpt domain 743 826 4.8E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Gene3D G3DSA:3.30.565.10 260 426 1.4E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SMART SM00448 586 700 1.7E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 8.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 8.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 8.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 8.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Gene3D G3DSA:1.20.120.160 718 835 7.2E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SMART SM00388 196 261 4.8E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SUPERFAMILY SSF47384 180 262 2.75E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Pfam PF00072 Response regulator receiver domain 588 700 6.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SMART SM00387 308 423 1.3E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SUPERFAMILY SSF52172 585 703 1.57E-34 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Gene3D G3DSA:1.10.287.130 176 259 4.1E-26 T 11-10-2018 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 SUPERFAMILY SSF47226 723 833 8.37E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2671 13fa4e68fbadf4e8ae6df34deefe75e7 841 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 421 1.6E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 SMART SM00996 46 513 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 46 513 2.6E-144 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 PIRSF PIRSF001109 34 514 4.4E-188 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 47 506 3.4E-180 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 118 132 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 289 305 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 SMART SM00997 267 432 2.3E-114 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 Gene3D G3DSA:3.40.50.720 269 432 6.8E-235 T 11-10-2018 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 SUPERFAMILY SSF51735 267 432 6.76E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 267 432 6.8E-78 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 Gene3D G3DSA:3.40.50.1480 47 514 6.8E-235 T 11-10-2018 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 42 506 48.232 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Tbd_2519 19c159fba4c62a9d0950f49d22986b8c 514 SUPERFAMILY SSF52283 44 514 5.44E-112 T 11-10-2018 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 248 825 8.5E-208 T 11-10-2018 IPR014143 DNA ligase D Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 554 797 2.8E-88 T 11-10-2018 IPR014145 DNA ligase D, polymerase domain Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Pfam PF13298 DNA polymerase Ligase (LigD) 38 142 2.5E-38 T 11-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Pfam PF04679 ATP dependent DNA ligase C terminal region 436 529 4.2E-24 T 11-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 SUPERFAMILY SSF50249 420 540 1.67E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 7 162 3.1E-66 T 11-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 SUPERFAMILY SSF56091 218 418 3.36E-46 T 11-10-2018 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 236 535 1.6E-101 T 11-10-2018 IPR014146 DNA ligase D, ligase domain Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Gene3D G3DSA:3.30.1490.70 248 415 1.9E-42 T 11-10-2018 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Pfam PF01068 ATP dependent DNA ligase domain 249 417 1.3E-20 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Gene3D G3DSA:3.90.920.30 560 840 3.2E-101 T 11-10-2018 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Gene3D G3DSA:3.30.470.30 260 374 1.9E-42 T 11-10-2018 Tbd_2247 a4a7f2297be4f3f191bab379dcb3a005 846 Gene3D G3DSA:2.40.50.140 419 537 3.5E-35 T 11-10-2018 Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 Pfam PF13579 Glycosyl transferase 4-like domain 15 190 4.2E-24 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 2 399 2.5E-201 T 11-10-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 SUPERFAMILY SSF53756 2 399 8.57E-75 T 11-10-2018 Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 Gene3D G3DSA:3.40.50.2000 1 202 1.7E-27 T 11-10-2018 Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 Pfam PF13692 Glycosyl transferases group 1 217 363 4.2E-29 T 11-10-2018 Tbd_0293 79f8ad46902c01f427fa21ca5bb787b6 406 Gene3D G3DSA:3.40.50.2000 203 381 1.3E-40 T 11-10-2018 Tbd_0852 6d6c311b6bada5c926dc7663a65180aa 151 Pfam PF00293 NUDIX domain 11 130 2.2E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_0852 6d6c311b6bada5c926dc7663a65180aa 151 Gene3D G3DSA:3.90.79.10 5 151 1.9E-37 T 11-10-2018 Tbd_0852 6d6c311b6bada5c926dc7663a65180aa 151 SUPERFAMILY SSF55811 9 147 9.34E-28 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 Gene3D G3DSA:1.10.40.30 406 454 1.5E-13 T 11-10-2018 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 Gene3D G3DSA:1.10.275.10 5 138 1.6E-50 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 Pfam PF10415 Fumarase C C-terminus 406 452 6.7E-13 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 7.1E-30 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 7.1E-30 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 7.1E-30 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 7.1E-30 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 Gene3D G3DSA:1.20.200.10 139 405 6.6E-96 T 11-10-2018 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 SUPERFAMILY SSF48557 4 452 3.24E-131 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 Pfam PF00206 Lyase 12 340 2.5E-85 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 4.8E-10 T 11-10-2018 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 4.8E-10 T 11-10-2018 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 4.8E-10 T 11-10-2018 Tbd_2119 b03efa7891023d9abb4ad9f525f9bc48 466 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 Gene3D G3DSA:3.40.1450.10 77 311 5.4E-217 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 SUPERFAMILY SSF64158 77 309 1.05E-82 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 298 1.2E-77 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 511 50.393 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 PIRSF PIRSF001492 1 513 4.8E-201 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 510 5.2E-217 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 SUPERFAMILY SSF53649 5 510 3.55E-74 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 Pfam PF01676 Metalloenzyme superfamily 5 499 1.2E-74 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Tbd_2394 8c417bf1dd9ecebd8c241a68fa02bf4b 513 Gene3D G3DSA:3.40.720.10 5 508 5.4E-217 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Pfam PF08245 Mur ligase middle domain 121 325 6.1E-52 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 36 502 1.9E-150 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 SUPERFAMILY SSF53623 112 345 1.57E-75 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Gene3D G3DSA:3.40.1390.10 18 111 7.6E-19 T 11-10-2018 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Pfam PF01225 Mur ligase family, catalytic domain 39 98 2.7E-6 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Gene3D G3DSA:3.90.190.20 349 505 4.6E-57 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 SUPERFAMILY SSF53244 348 503 1.83E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 SUPERFAMILY SSF63418 29 110 4.32E-18 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 16 502 33.484 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Gene3D G3DSA:3.40.1190.10 112 348 4.0E-80 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0114 7e025fb4229b7cdc3c59a9b406a0aad1 506 Pfam PF02875 Mur ligase family, glutamate ligase domain 348 433 5.2E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_0512 ba862b13fe11c70d7b81bc4cb1429fad 490 PIRSF PIRSF004919 29 490 1.1E-140 T 11-10-2018 IPR025502 TldD Tbd_0512 ba862b13fe11c70d7b81bc4cb1429fad 490 SUPERFAMILY SSF111283 38 489 2.35E-137 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tbd_0512 ba862b13fe11c70d7b81bc4cb1429fad 490 Pfam PF01523 Putative modulator of DNA gyrase 49 341 5.7E-75 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tbd_0512 ba862b13fe11c70d7b81bc4cb1429fad 490 Gene3D G3DSA:3.30.2290.10 25 249 7.8E-24 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 60 2.0E-22 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 SUPERFAMILY SSF54211 3 60 5.31E-16 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 Gene3D G3DSA:3.30.230.10 1 83 9.7E-20 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 54 2.4E-12 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 23 37 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Tbd_2826 b61c02c3ed775c76d6db5254a979e1e7 99 Pfam PF00825 Ribonuclease P 2 56 5.1E-15 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tbd_1968 04d1b6a55b63cab09506c2aedecd2832 150 Gene3D G3DSA:2.60.120.10 1 148 9.3E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1968 04d1b6a55b63cab09506c2aedecd2832 150 Pfam PF12973 ChrR Cupin-like domain 17 102 8.7E-24 T 11-10-2018 IPR025979 ChrR-like cupin domain Tbd_1968 04d1b6a55b63cab09506c2aedecd2832 150 SUPERFAMILY SSF51182 1 125 1.96E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_1825 e06a2fa6212f256a78138469242e55fa 299 Gene3D G3DSA:3.40.50.300 14 288 2.4E-75 T 11-10-2018 Tbd_1825 e06a2fa6212f256a78138469242e55fa 299 SUPERFAMILY SSF52540 20 199 1.15E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1825 e06a2fa6212f256a78138469242e55fa 299 Pfam PF13481 AAA domain 20 194 3.7E-38 T 11-10-2018 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 413 2.0E-26 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 152 5.2E-48 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Gene3D G3DSA:3.30.460.30 1 154 2.3E-53 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 PIRSF PIRSF000445 1 416 6.4E-144 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 414 28.853 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Gene3D G3DSA:3.40.50.720 157 326 4.0E-41 T 11-10-2018 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 SUPERFAMILY SSF69742 1 154 8.37E-46 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 SUPERFAMILY SSF69075 314 414 1.96E-28 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 6.5E-127 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 95 118 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 SUPERFAMILY SSF51735 158 310 3.58E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2492 443e0fc1ef892f12a24452efa7cb1d32 416 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 168 302 9.9E-43 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tbd_1685 cf80f4b1b87c74663bd0256ab60c831e 665 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 39 633 2.5E-143 T 11-10-2018 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY Tbd_0477 8649353d4940aa22066199743ab927e8 244 Gene3D G3DSA:3.30.230.70 15 244 8.0E-61 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0477 8649353d4940aa22066199743ab927e8 244 Hamap MF_00564 Ribonuclease PH [rph]. 16 242 43.577 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tbd_0477 8649353d4940aa22066199743ab927e8 244 ProSitePatterns PS01277 Ribonuclease PH signature. 121 133 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site Tbd_0477 8649353d4940aa22066199743ab927e8 244 SUPERFAMILY SSF55666 159 242 3.8E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0477 8649353d4940aa22066199743ab927e8 244 Pfam PF03725 3' exoribonuclease family, domain 2 163 228 6.8E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0477 8649353d4940aa22066199743ab927e8 244 SUPERFAMILY SSF54211 6 186 7.09E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0477 8649353d4940aa22066199743ab927e8 244 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 240 6.8E-113 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tbd_0477 8649353d4940aa22066199743ab927e8 244 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 1.2E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Gene3D G3DSA:3.30.50.30 2 50 4.4E-25 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Pfam PF06689 ClpX C4-type zinc finger 11 48 2.1E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 SMART SM00994 10 49 1.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 SMART SM00382 110 331 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 389 4.8E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 SUPERFAMILY SSF52540 60 396 3.45E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.89 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 SUPERFAMILY SSF57716 11 46 7.27E-12 T 11-10-2018 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Gene3D G3DSA:1.10.8.60 314 421 9.0E-38 T 11-10-2018 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Gene3D G3DSA:3.40.50.300 56 313 6.7E-110 T 11-10-2018 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 SMART SM01086 315 410 3.0E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 308 9.3E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1676 ca26637349acd10ddef8e775ba1e6647 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 410 1.1E-203 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 SUPERFAMILY SSF55594 1 88 5.63E-32 T 11-10-2018 IPR035895 HPr-like superfamily Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.5E-20 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.5E-20 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.5E-20 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.4E-34 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 Gene3D G3DSA:3.30.1340.10 1 88 3.3E-36 T 11-10-2018 IPR035895 HPr-like superfamily Tbd_2413 d77cb5678de5cca2c24ac06113f0edbf 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 8.6E-31 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Tbd_0045 d8c0825a21b574ff03d50bc13adf8171 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 5.5E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Tbd_0045 d8c0825a21b574ff03d50bc13adf8171 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Tbd_0045 d8c0825a21b574ff03d50bc13adf8171 126 Gene3D G3DSA:3.10.180.10 7 125 3.4E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_0045 d8c0825a21b574ff03d50bc13adf8171 126 SUPERFAMILY SSF54593 1 124 1.02E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 850 286.658 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SUPERFAMILY SSF109604 401 527 5.34E-15 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 PIRSF PIRSF006288 2 849 3.7E-288 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 Pfam PF01966 HD domain 437 546 2.4E-11 T 11-10-2018 IPR006674 HD domain Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 Pfam PF01909 Nucleotidyltransferase domain 46 89 4.5E-5 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SUPERFAMILY SSF81593 179 295 1.02E-8 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 32 844 4.4E-233 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SUPERFAMILY SSF55021 780 848 9.16E-8 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SUPERFAMILY SSF81301 39 157 6.95E-20 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 Gene3D G3DSA:1.10.3210.10 422 571 1.9E-9 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SUPERFAMILY SSF55021 670 729 2.21E-8 T 11-10-2018 Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 SMART SM00471 432 579 6.1E-8 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_0783 2e9c9b47c866199e84c127c248a02d50 850 Pfam PF08335 GlnD PII-uridylyltransferase 161 301 9.7E-32 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 SUPERFAMILY SSF52141 37 220 1.99E-56 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 SMART SM00987 65 225 1.4E-37 T 11-10-2018 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 Pfam PF03167 Uracil DNA glycosylase superfamily 65 224 3.7E-39 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 16 226 4.6E-80 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 SMART SM00986 65 225 1.4E-37 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 Gene3D G3DSA:3.40.470.10 32 232 3.8E-59 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1481 c0aaf0053315ad7279e975450ecebd4f 235 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 51 213 8.3E-46 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 Pfam PF13307 Helicase C-terminal domain 464 625 1.8E-36 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 SUPERFAMILY SSF52540 454 610 1.59E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 Gene3D G3DSA:3.40.50.300 21 266 3.7E-48 T 11-10-2018 Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 SUPERFAMILY SSF52540 20 608 1.3E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 Gene3D G3DSA:3.40.50.300 448 643 2.7E-37 T 11-10-2018 Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 SMART SM00487 19 304 0.0074 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_0997 4326b8cb6e1e1f88a7d5e3412c8fa27c 643 SMART SM00491 479 613 1.6E-38 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 SUPERFAMILY SSF49503 58 202 2.57E-43 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 ProSitePatterns PS00080 Multicopper oxidases signature 2. 543 554 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 SUPERFAMILY SSF49503 399 560 1.66E-33 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Gene3D G3DSA:2.60.40.420 46 173 8.1E-44 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 ProSitePatterns PS00079 Multicopper oxidases signature 1. 149 169 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 386 1.4E-191 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Gene3D G3DSA:2.60.40.420 182 389 3.2E-39 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Pfam PF07732 Multicopper oxidase 63 174 3.4E-43 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 ProSitePatterns PS00079 Multicopper oxidases signature 1. 538 558 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 PRINTS PR00695 Copper containing nitrite reductase signature 142 157 4.8E-5 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 PRINTS PR00695 Copper containing nitrite reductase signature 79 95 4.8E-5 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Pfam PF07731 Multicopper oxidase 448 560 2.5E-23 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 SUPERFAMILY SSF49503 181 383 1.38E-51 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Gene3D G3DSA:2.60.40.420 441 561 2.5E-28 T 11-10-2018 IPR008972 Cupredoxin Tbd_1324 3329cd4211614e7bd4719b849695f1b8 561 Pfam PF00394 Multicopper oxidase 184 360 4.2E-30 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 242 1.6E-96 T 11-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 Pfam PF00005 ABC transporter 20 173 2.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 Gene3D G3DSA:3.40.50.300 2 252 1.0E-67 T 11-10-2018 Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 SMART SM00382 29 222 8.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 SUPERFAMILY SSF52540 4 234 5.2E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2299 e87cbe390b48dc4c086d4413ae5066d8 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 Pfam PF00551 Formyl transferase 4 179 8.0E-53 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 SUPERFAMILY SSF53328 4 194 2.49E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 Gene3D G3DSA:3.40.50.170 1 203 1.6E-76 T 11-10-2018 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 189 1.8E-67 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tbd_2666 8e8f67783e16c668a49676c9d6325098 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 185 31.414 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 PIRSF PIRSF004682 1 183 1.5E-51 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 147 3.7E-36 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 148 8.3E-31 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 Gene3D G3DSA:3.40.50.1000 1 178 1.6E-48 T 11-10-2018 IPR023214 HAD superfamily Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 Pfam PF13242 HAD-hyrolase-like 102 173 5.3E-16 T 11-10-2018 Tbd_0741 dbcca2f348b7b50550bf8595957fe69d 193 SUPERFAMILY SSF56784 1 178 7.32E-46 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0078 a46e79b91d2b3e118162f1539a1b91c8 625 Pfam PF12801 4Fe-4S binding domain 374 420 8.6E-15 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0078 a46e79b91d2b3e118162f1539a1b91c8 625 Pfam PF12801 4Fe-4S binding domain 477 521 9.0E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0078 a46e79b91d2b3e118162f1539a1b91c8 625 Pfam PF04205 FMN-binding domain 99 185 3.4E-10 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_0078 a46e79b91d2b3e118162f1539a1b91c8 625 SMART SM00900 96 188 1.5E-16 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_0078 a46e79b91d2b3e118162f1539a1b91c8 625 SUPERFAMILY SSF54862 388 556 2.93E-7 T 11-10-2018 Tbd_2006 3908ad9d4a09131028a8ce292c56187d 189 SUPERFAMILY SSF52833 31 188 2.89E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2006 3908ad9d4a09131028a8ce292c56187d 189 Gene3D G3DSA:3.40.30.10 27 177 1.9E-45 T 11-10-2018 Tbd_2006 3908ad9d4a09131028a8ce292c56187d 189 PIRSF PIRSF000239 26 189 9.2E-28 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_2006 3908ad9d4a09131028a8ce292c56187d 189 Pfam PF00578 AhpC/TSA family 33 155 3.0E-36 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0562 58dfb440c5120b6548435c5e475548b3 141 Pfam PF00034 Cytochrome c 50 125 2.4E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0562 58dfb440c5120b6548435c5e475548b3 141 SUPERFAMILY SSF46626 43 137 1.37E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0562 58dfb440c5120b6548435c5e475548b3 141 Gene3D G3DSA:1.10.760.10 1 141 2.7E-40 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 525 4.1E-25 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 SUPERFAMILY SSF56300 45 338 1.33E-60 T 11-10-2018 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 Gene3D G3DSA:3.90.780.10 381 574 1.1E-35 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 SUPERFAMILY SSF55816 360 560 6.54E-26 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 PRINTS PR01607 Apyrase family signature 234 251 2.9E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 PRINTS PR01607 Apyrase family signature 506 525 2.9E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 PRINTS PR01607 Apyrase family signature 282 302 2.9E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 PRINTS PR01607 Apyrase family signature 421 444 2.9E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 PRINTS PR01607 Apyrase family signature 49 67 2.9E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 Gene3D G3DSA:3.60.21.10 45 343 7.0E-67 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1292 39eb0db2596c3660df63ec6ae2545724 595 Pfam PF00149 Calcineurin-like phosphoesterase 52 270 1.7E-5 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 PRINTS PR00421 Thioredoxin family signature 29 38 8.5E-9 T 11-10-2018 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 PRINTS PR00421 Thioredoxin family signature 21 29 8.5E-9 T 11-10-2018 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 PRINTS PR00421 Thioredoxin family signature 68 79 8.5E-9 T 11-10-2018 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 Gene3D G3DSA:3.40.30.10 1 120 5.1E-31 T 11-10-2018 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 SUPERFAMILY SSF52833 2 104 2.25E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 PIRSF PIRSF000077 1 104 1.6E-26 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 Pfam PF00085 Thioredoxin 3 101 3.0E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 5.7E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_0223 40da222fff28ac19d783ab112ae12d9d 125 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 SMART SM01409 8 59 1.8E-14 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.728 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 Gene3D G3DSA:3.90.940.10 1 67 1.9E-21 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 SUPERFAMILY SSF63562 1 63 1.11E-20 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 Pfam PF01192 RNA polymerase Rpb6 8 57 1.4E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tbd_0472 d00f93219e9b861abe5e4db2dea73390 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 5.8E-18 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_2589 2eb7d56b20ff96634a4bdba31887272c 78 Gene3D G3DSA:2.30.170.40 2 78 2.6E-32 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2589 2eb7d56b20ff96634a4bdba31887272c 78 SUPERFAMILY SSF143800 2 75 6.47E-31 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2589 2eb7d56b20ff96634a4bdba31887272c 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.292 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2589 2eb7d56b20ff96634a4bdba31887272c 78 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-28 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2589 2eb7d56b20ff96634a4bdba31887272c 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.4E-27 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0259 a3f1a48c8de117985d43360cb2169f06 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 19.534 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tbd_0259 a3f1a48c8de117985d43360cb2169f06 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.3E-25 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tbd_0259 a3f1a48c8de117985d43360cb2169f06 95 SUPERFAMILY SSF141000 3 93 1.15E-24 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Tbd_0259 a3f1a48c8de117985d43360cb2169f06 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 6.7E-14 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tbd_0259 a3f1a48c8de117985d43360cb2169f06 95 Gene3D G3DSA:1.10.20.60 1 93 6.4E-19 T 11-10-2018 Tbd_0748 a02b3913c9dcebd2ad55dc6d34d2bbc9 347 Pfam PF07728 AAA domain (dynein-related subfamily) 24 141 2.9E-9 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_0748 a02b3913c9dcebd2ad55dc6d34d2bbc9 347 SUPERFAMILY SSF52540 23 162 6.17E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0748 a02b3913c9dcebd2ad55dc6d34d2bbc9 347 Gene3D G3DSA:3.40.50.300 11 165 5.9E-24 T 11-10-2018 Tbd_0748 a02b3913c9dcebd2ad55dc6d34d2bbc9 347 SMART SM00382 21 164 5.6E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0836 69130518d8c0c91762d8f0d2bfca8fb2 226 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 21 222 1.9E-55 T 11-10-2018 Tbd_0836 69130518d8c0c91762d8f0d2bfca8fb2 226 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 14 225 32.66 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Tbd_0836 69130518d8c0c91762d8f0d2bfca8fb2 226 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 15 224 1.1E-60 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Tbd_0836 69130518d8c0c91762d8f0d2bfca8fb2 226 Gene3D G3DSA:3.40.50.150 9 225 2.8E-68 T 11-10-2018 Tbd_0836 69130518d8c0c91762d8f0d2bfca8fb2 226 SUPERFAMILY SSF53335 14 224 1.32E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2688 a8eaac6924eeeaa958144c1d7194d787 772 Gene3D G3DSA:2.170.130.10 38 152 1.5E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_2688 a8eaac6924eeeaa958144c1d7194d787 772 SUPERFAMILY SSF56935 54 772 1.37E-77 T 11-10-2018 Tbd_2688 a8eaac6924eeeaa958144c1d7194d787 772 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 755 772 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Tbd_2688 a8eaac6924eeeaa958144c1d7194d787 772 Pfam PF00593 TonB dependent receptor 243 770 5.7E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_2688 a8eaac6924eeeaa958144c1d7194d787 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 144 3.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_1183 aa44d02e67fa6b96deed1317e69178ec 119 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 8 111 1.0E-29 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Tbd_1183 aa44d02e67fa6b96deed1317e69178ec 119 SUPERFAMILY SSF81343 5 111 5.01E-24 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1183 aa44d02e67fa6b96deed1317e69178ec 119 Gene3D G3DSA:1.20.1300.10 1 112 7.2E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1183 aa44d02e67fa6b96deed1317e69178ec 119 PIRSF PIRSF000169 1 113 6.5E-28 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Tbd_1183 aa44d02e67fa6b96deed1317e69178ec 119 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 104 3.2E-11 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_0106 c499920f07fa75ce34f24af7c40cdef3 190 SMART SM00749 49 113 170.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tbd_0106 c499920f07fa75ce34f24af7c40cdef3 190 SMART SM00749 128 190 1.2E-6 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tbd_0106 c499920f07fa75ce34f24af7c40cdef3 190 Pfam PF04972 BON domain 123 187 1.3E-14 T 11-10-2018 IPR007055 BON domain Tbd_0106 c499920f07fa75ce34f24af7c40cdef3 190 Pfam PF04972 BON domain 47 113 5.8E-11 T 11-10-2018 IPR007055 BON domain Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 SUPERFAMILY SSF52540 4 253 1.25E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 297 4.3E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 568 633 1.4E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Pfam PF00005 ABC transporter 25 182 6.3E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Gene3D G3DSA:3.40.50.300 339 657 1.7E-99 T 11-10-2018 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Gene3D G3DSA:3.40.50.300 2 324 1.6E-92 T 11-10-2018 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 566 652 3.7E-25 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 8.9E-23 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 SMART SM00382 33 232 1.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 SMART SM00382 377 566 2.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 SUPERFAMILY SSF52540 341 588 1.38E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1668 e5f7d28df067d66407e1ea98a95ac1ee 659 Pfam PF00005 ABC transporter 369 517 5.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 SMART SM00448 4 117 1.6E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 Pfam PF00072 Response regulator receiver domain 6 117 2.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 SMART SM00421 150 207 7.0E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 SUPERFAMILY SSF52172 5 132 1.11E-32 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 SUPERFAMILY SSF46894 146 212 2.55E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.6E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 Gene3D G3DSA:3.40.50.12740 4 212 8.4E-64 T 11-10-2018 Tbd_2464 a59e1373d04c08b4f20e0492e11701cb 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 Gene3D G3DSA:3.40.50.300 5 184 2.3E-50 T 11-10-2018 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 279 1.4E-86 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 Pfam PF07650 KH domain 209 284 1.1E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 Pfam PF01926 50S ribosome-binding GTPase 12 125 1.7E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 SUPERFAMILY SSF52540 12 203 1.45E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 Gene3D G3DSA:3.30.300.20 186 297 1.9E-38 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 171 1.2E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 PRINTS PR00449 Transforming protein P21 ras signature 10 31 2.5E-6 T 11-10-2018 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 PRINTS PR00449 Transforming protein P21 ras signature 151 173 2.5E-6 T 11-10-2018 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 PRINTS PR00449 Transforming protein P21 ras signature 115 128 2.5E-6 T 11-10-2018 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 Hamap MF_00367 GTPase Era [era]. 7 296 35.13 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2085 a82e0db4dca4ab1a5238e28cc54db0ea 297 SUPERFAMILY SSF54814 182 296 7.85E-41 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tbd_1068 1111f11cd3fb5494fe1a425d9b8310ea 264 SUPERFAMILY SSF54913 1 67 2.89E-6 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_1068 1111f11cd3fb5494fe1a425d9b8310ea 264 Pfam PF09413 Putative prokaryotic signal transducing protein 1 67 3.0E-19 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Pfam PF10410 DnaB-helicase binding domain of primase 358 410 1.6E-8 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SMART SM00766 440 563 8.0E-29 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 TIGRFAM TIGR01391 dnaG: DNA primase 1 406 1.9E-138 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SMART SM00400 33 87 4.0E-31 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Pfam PF01807 CHC2 zinc finger 3 95 1.8E-38 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Gene3D G3DSA:3.90.580.10 1 99 5.2E-39 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SUPERFAMILY SSF56731 110 410 8.63E-101 T 11-10-2018 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SUPERFAMILY SSF117023 438 563 1.31E-17 T 11-10-2018 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Hamap MF_00974 DNA primase [dnaG]. 1 564 28.37 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Pfam PF08278 DNA primase DnaG DnaB-binding 442 562 1.2E-16 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Gene3D G3DSA:3.90.980.10 108 228 5.1E-39 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SMART SM00493 247 318 4.0E-15 T 11-10-2018 IPR006171 TOPRIM domain Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Gene3D G3DSA:3.40.1360.10 229 355 1.1E-40 T 11-10-2018 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Pfam PF08275 DNA primase catalytic core, N-terminal domain 120 239 2.7E-37 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Gene3D G3DSA:1.10.860.10 429 565 1.5E-7 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 SUPERFAMILY SSF57783 1 97 2.04E-37 T 11-10-2018 Tbd_2387 4db2a2c2ae1b2618eaa8f0cc9f9955c9 565 Pfam PF13155 Toprim-like 250 338 8.9E-15 T 11-10-2018 Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 Pfam PF00582 Universal stress protein family 14 146 1.6E-24 T 11-10-2018 IPR006016 UspA Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 Pfam PF00582 Universal stress protein family 154 279 1.3E-29 T 11-10-2018 IPR006016 UspA Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 PRINTS PR01438 Universal stress protein signature 153 171 3.2E-21 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 PRINTS PR01438 Universal stress protein signature 239 251 3.2E-21 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 PRINTS PR01438 Universal stress protein signature 257 279 3.2E-21 T 11-10-2018 IPR006015 Universal stress protein A Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 Gene3D G3DSA:3.40.50.620 153 279 1.4E-35 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 SUPERFAMILY SSF52402 154 279 6.84E-36 T 11-10-2018 Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 SUPERFAMILY SSF52402 14 146 6.78E-27 T 11-10-2018 Tbd_2614 fe9971f16c0cf40ee211b4a327b5e39a 280 Gene3D G3DSA:3.40.50.620 1 145 8.7E-27 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:3.40.50.20 1 116 2.0E-49 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:1.10.1030.10 403 548 3.5E-47 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 13.172 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF52335 937 1066 1.7E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.0E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF48108 396 549 3.66E-52 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:3.40.50.1380 933 1068 2.0E-36 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 869 2.9E-35 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.3E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:3.40.50.20 549 657 2.4E-49 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF56059 128 401 3.36E-109 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1063 13.395 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 1.1E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:3.30.470.20 660 930 1.2E-117 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF56059 668 928 1.31E-103 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Pfam PF02142 MGS-like domain 952 1037 3.8E-20 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF52440 1 127 5.61E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SUPERFAMILY SSF52440 552 670 2.88E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 Gene3D G3DSA:3.30.470.20 119 402 9.3E-131 T 11-10-2018 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1046 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SMART SM00851 951 1037 1.9E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Tbd_1128 22b39dded39b0d21e769889879c1b735 1068 SMART SM01096 419 542 1.7E-72 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 SUPERFAMILY SSF51230 74 148 2.49E-24 T 11-10-2018 IPR011053 Single hybrid motif Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 148 5.8E-55 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 Gene3D G3DSA:2.40.50.100 70 148 3.5E-31 T 11-10-2018 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 Pfam PF00364 Biotin-requiring enzyme 76 148 2.2E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 3.6E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 3.6E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 3.6E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tbd_0182 37d1d928a074caffb2f2b69e4cc96bbc 149 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 105 122 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 Gene3D G3DSA:3.30.1330.60 288 402 1.4E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 SUPERFAMILY SSF56925 27 183 3.92E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 Pfam PF02412 Thrombospondin type 3 repeat 243 263 9.9E-4 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 Pfam PF02412 Thrombospondin type 3 repeat 213 233 0.021 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 PRINTS PR01021 OMPA domain signature 346 362 3.9E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 PRINTS PR01021 OMPA domain signature 331 346 3.9E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 PRINTS PR01021 OMPA domain signature 301 323 3.9E-11 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 SUPERFAMILY SSF103088 288 400 1.16E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 Gene3D G3DSA:4.10.1080.10 178 273 1.0E-6 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 Pfam PF00691 OmpA family 301 395 2.8E-24 T 11-10-2018 IPR006665 OmpA-like domain Tbd_2454 84bb15e91d0c50245a94ec4136846357 402 SUPERFAMILY SSF103647 180 262 2.48E-22 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Tbd_0144 a1d7a2cfd3e11f469680620df90aa7f5 420 Gene3D G3DSA:1.20.1600.10 19 407 4.3E-27 T 11-10-2018 Tbd_0144 a1d7a2cfd3e11f469680620df90aa7f5 420 SUPERFAMILY SSF56954 3 407 3.79E-30 T 11-10-2018 Tbd_0144 a1d7a2cfd3e11f469680620df90aa7f5 420 Pfam PF02321 Outer membrane efflux protein 69 202 1.0E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1800 1a71f6472067813ac154507c329db0b0 209 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 182 206 0.0026 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1800 1a71f6472067813ac154507c329db0b0 209 Pfam PF07589 PEP-CTERM motif 181 205 1.6E-7 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1254 788f39be5300e87b70bbe0eb315ef709 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 11-10-2018 IPR001455 TusA-like domain Tbd_1254 788f39be5300e87b70bbe0eb315ef709 77 SUPERFAMILY SSF64307 3 76 6.15E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_1254 788f39be5300e87b70bbe0eb315ef709 77 Gene3D G3DSA:3.30.110.40 1 77 4.3E-30 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_1254 788f39be5300e87b70bbe0eb315ef709 77 Pfam PF01206 Sulfurtransferase TusA 8 76 5.3E-25 T 11-10-2018 IPR001455 TusA-like domain Tbd_2349 0d90e8604e37792202a907d67998023f 256 SUPERFAMILY SSF56524 44 255 2.49E-54 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Tbd_2349 0d90e8604e37792202a907d67998023f 256 Gene3D G3DSA:3.90.420.10 57 256 2.1E-54 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Tbd_2349 0d90e8604e37792202a907d67998023f 256 Pfam PF00174 Oxidoreductase molybdopterin binding domain 96 233 3.3E-41 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Tbd_0221 c439eb1ec984080094a035de091100f5 343 SUPERFAMILY SSF142754 14 330 4.84E-103 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tbd_0221 c439eb1ec984080094a035de091100f5 343 Gene3D G3DSA:3.40.50.10800 100 329 1.0E-90 T 11-10-2018 Tbd_0221 c439eb1ec984080094a035de091100f5 343 Gene3D G3DSA:3.40.50.10800 16 311 1.0E-90 T 11-10-2018 Tbd_0221 c439eb1ec984080094a035de091100f5 343 Pfam PF02445 Quinolinate synthetase A protein 17 329 4.9E-99 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tbd_0221 c439eb1ec984080094a035de091100f5 343 Gene3D G3DSA:3.40.50.10800 185 280 1.0E-90 T 11-10-2018 Tbd_0221 c439eb1ec984080094a035de091100f5 343 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 13 330 5.1E-108 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tbd_0718 975616a128ff28be045e0d8b43c18bef 613 Pfam PF04183 IucA / IucC family 168 400 9.3E-60 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 Tbd_0718 975616a128ff28be045e0d8b43c18bef 613 Gene3D G3DSA:3.10.450.440 41 111 4.9E-12 T 11-10-2018 Tbd_0718 975616a128ff28be045e0d8b43c18bef 613 Gene3D G3DSA:1.10.510.40 412 593 1.3E-20 T 11-10-2018 Tbd_0718 975616a128ff28be045e0d8b43c18bef 613 Gene3D G3DSA:1.10.150.640 23 151 4.9E-12 T 11-10-2018 Tbd_0718 975616a128ff28be045e0d8b43c18bef 613 Pfam PF06276 Ferric iron reductase FhuF-like transporter 431 592 1.9E-36 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 SUPERFAMILY SSF52540 164 555 1.44E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 135 6.8E-8 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 Pfam PF00437 Type II/IV secretion system protein 178 446 2.9E-74 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 Gene3D G3DSA:3.40.50.300 285 557 5.0E-104 T 11-10-2018 Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 SUPERFAMILY SSF160246 8 131 3.14E-10 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 Gene3D G3DSA:3.30.450.90 147 275 3.2E-43 T 11-10-2018 Tbd_1434 3532836251eea3c2d34ecd43cfac3ecb 558 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 375 389 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Gene3D G3DSA:1.20.5.100 203 234 4.5E-18 T 11-10-2018 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 2.0E-37 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 186 4.0E-67 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 PIRSF PIRSF500134 1 440 3.1E-192 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 SUPERFAMILY SSF51735 2 195 5.3E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0961 e9354e74244e33f575632104b00b5d21 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 420 7.1E-138 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 SUPERFAMILY SSF48179 204 301 3.63E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 7.2E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Gene3D G3DSA:3.40.50.720 1 202 8.6E-85 T 11-10-2018 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 PIRSF PIRSF000124 1 439 2.1E-150 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 Gene3D G3DSA:3.40.50.720 235 440 7.8E-80 T 11-10-2018 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 SUPERFAMILY SSF52413 305 435 3.27E-41 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Tbd_0961 e9354e74244e33f575632104b00b5d21 440 SMART SM00984 320 424 3.1E-51 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 SMART SM00382 187 354 2.7E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 SMART SM00962 188 380 2.7E-54 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 Gene3D G3DSA:1.20.120.1380 156 370 6.4E-52 T 11-10-2018 Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 276 6.3E-80 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 SUPERFAMILY SSF52540 184 379 9.88E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 Gene3D G3DSA:3.40.50.300 182 368 6.4E-52 T 11-10-2018 Tbd_1247 d621d5f909eb20701ab0063c16426c8f 414 Pfam PF00448 SRP54-type protein, GTPase domain 190 379 3.3E-35 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 PRINTS PR00980 Alanyl-tRNA synthetase signature 316 329 3.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 PRINTS PR00980 Alanyl-tRNA synthetase signature 88 99 3.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 PRINTS PR00980 Alanyl-tRNA synthetase signature 246 259 3.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 308 3.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 PRINTS PR00980 Alanyl-tRNA synthetase signature 219 230 3.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 SUPERFAMILY SSF55681 15 265 1.24E-108 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 20 864 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Pfam PF01411 tRNA synthetases class II (A) 20 565 7.1E-219 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 SMART SM00863 664 706 5.8E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 SUPERFAMILY SSF50447 465 563 1.87E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 SUPERFAMILY SSF55186 563 721 5.62E-49 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Gene3D G3DSA:2.40.30.130 472 563 5.8E-10 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 885 199.701 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Gene3D G3DSA:3.30.980.10 573 707 1.2E-49 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 SUPERFAMILY SSF101353 266 457 1.7E-56 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Gene3D G3DSA:3.30.54.20 635 687 1.2E-49 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 664 706 2.2E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Gene3D G3DSA:3.30.930.10 14 262 1.2E-119 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Gene3D G3DSA:3.10.310.40 774 883 2.9E-31 T 11-10-2018 Tbd_0553 cb2fb37d3c6010a9f0cff40e4faaebe1 886 Pfam PF02272 DHHA1 domain 744 881 1.9E-26 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Pfam PF13840 ACT domain 338 400 2.7E-16 T 11-10-2018 IPR027795 CASTOR, ACT domain Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Pfam PF01842 ACT domain 268 325 1.3E-8 T 11-10-2018 IPR002912 ACT domain Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Pfam PF00696 Amino acid kinase family 3 229 9.9E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 SUPERFAMILY SSF53633 4 242 7.85E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Gene3D G3DSA:3.40.1160.10 1 255 8.2E-92 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 8.7E-133 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 PIRSF PIRSF000726 56 409 2.7E-149 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 PIRSF PIRSF000726 1 62 3.5E-22 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 SUPERFAMILY SSF55021 249 326 7.33E-19 T 11-10-2018 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 403 5.9E-119 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 SUPERFAMILY SSF55021 332 405 2.52E-25 T 11-10-2018 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Gene3D G3DSA:3.30.70.260 256 404 1.2E-57 T 11-10-2018 Tbd_0969 2ff7fd79e60ccce2721bba3d183dd06a 409 Gene3D G3DSA:3.30.70.260 262 339 1.2E-57 T 11-10-2018 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Gene3D G3DSA:3.30.70.270 392 567 3.5E-61 T 11-10-2018 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00052 565 811 8.1E-119 T 11-10-2018 IPR001633 EAL domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 553 9.0E-46 T 11-10-2018 IPR000160 GGDEF domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 265 2.1E-22 T 11-10-2018 IPR000014 PAS domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 390 1.0E-11 T 11-10-2018 IPR000014 PAS domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00091 146 212 3.6E-10 T 11-10-2018 IPR000014 PAS domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00091 268 336 1.2 T 11-10-2018 IPR000014 PAS domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Gene3D G3DSA:3.30.450.20 145 272 3.6E-36 T 11-10-2018 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Pfam PF13426 PAS domain 157 259 8.7E-16 T 11-10-2018 IPR000014 PAS domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SUPERFAMILY SSF52172 13 158 2.28E-27 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 PIRSF PIRSF005925 261 388 1.5E-4 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 PIRSF PIRSF005925 135 274 9.6E-11 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 PIRSF PIRSF005925 373 834 2.2E-142 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SUPERFAMILY SSF55785 279 392 5.76E-15 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SUPERFAMILY SSF141868 570 819 8.89E-91 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SUPERFAMILY SSF55073 399 557 9.68E-52 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00448 14 125 1.3E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Gene3D G3DSA:3.20.20.450 568 819 1.2E-104 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Pfam PF00563 EAL domain 572 806 5.7E-74 T 11-10-2018 IPR001633 EAL domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Pfam PF00072 Response regulator receiver domain 17 124 9.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Pfam PF08448 PAS fold 274 384 1.4E-5 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00267 383 555 1.5E-68 T 11-10-2018 IPR000160 GGDEF domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Gene3D G3DSA:3.30.450.20 274 391 1.8E-16 T 11-10-2018 Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SUPERFAMILY SSF55785 153 260 7.68E-27 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00086 218 260 8.0E-5 T 11-10-2018 IPR001610 PAC motif Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 SMART SM00086 341 383 14.0 T 11-10-2018 IPR001610 PAC motif Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 551 1.8E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_1191 3afc6b81a254e83d0f79386aef25b41e 836 Gene3D G3DSA:3.40.50.2300 14 144 4.9E-22 T 11-10-2018 Tbd_2806 4ac567e76a0c5edb39cea5e8d773ea0b 261 Pfam PF13614 AAA domain 3 178 1.9E-62 T 11-10-2018 IPR025669 AAA domain Tbd_2806 4ac567e76a0c5edb39cea5e8d773ea0b 261 SUPERFAMILY SSF52540 1 253 8.48E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2806 4ac567e76a0c5edb39cea5e8d773ea0b 261 Gene3D G3DSA:3.40.50.300 1 255 1.9E-78 T 11-10-2018 Tbd_2806 4ac567e76a0c5edb39cea5e8d773ea0b 261 PIRSF PIRSF009320 2 73 3.1E-16 T 11-10-2018 Tbd_2806 4ac567e76a0c5edb39cea5e8d773ea0b 261 PIRSF PIRSF009320 88 260 1.5E-9 T 11-10-2018 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 Gene3D G3DSA:3.90.470.10 1 109 2.6E-43 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 Pfam PF00237 Ribosomal protein L22p/L17e 7 107 2.3E-35 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 SUPERFAMILY SSF54843 1 108 5.62E-40 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 25.091 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 7.4E-44 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0410 d5497a3e455ea22dcf056759d0bf87bb 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 Pfam PF05226 CHASE2 domain 26 380 8.1E-56 T 11-10-2018 IPR007890 CHASE2 Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 478 656 2.1E-34 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 SMART SM01080 34 383 5.1E-88 T 11-10-2018 IPR007890 CHASE2 Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 Gene3D G3DSA:3.30.70.1230 470 674 1.6E-69 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 SUPERFAMILY SSF55073 475 662 5.02E-60 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0983 24f4d8ce6466898d343af2799e9e9ce4 737 SMART SM00044 445 647 6.8E-19 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Tbd_0667 7005fd7896aed02789deaa037b9f9533 383 SUPERFAMILY SSF55729 179 343 5.0E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0667 7005fd7896aed02789deaa037b9f9533 383 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 8 319 9.7E-16 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition Tbd_0908 e569c5e65e3842f4908758abd57ea01f 160 SUPERFAMILY SSF52833 2 156 1.67E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0908 e569c5e65e3842f4908758abd57ea01f 160 Gene3D G3DSA:3.40.30.10 10 158 8.3E-9 T 11-10-2018 Tbd_0908 e569c5e65e3842f4908758abd57ea01f 160 Pfam PF00578 AhpC/TSA family 36 84 2.7E-5 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0032 e14c94ba889d0299a0a8778ad429190b 198 Pfam PF06080 Protein of unknown function (DUF938) 4 196 4.2E-74 T 11-10-2018 IPR010342 Protein of unknown function DUF938 Tbd_0032 e14c94ba889d0299a0a8778ad429190b 198 Gene3D G3DSA:3.40.50.150 4 196 7.3E-22 T 11-10-2018 Tbd_0032 e14c94ba889d0299a0a8778ad429190b 198 SUPERFAMILY SSF53335 15 195 1.55E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2277 cc489ae5ec0c15d448312b58baf72dbd 127 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 115 6.9E-7 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Tbd_2277 cc489ae5ec0c15d448312b58baf72dbd 127 Gene3D G3DSA:3.30.2310.20 2 117 6.2E-5 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Pfam PF13426 PAS domain 573 677 3.3E-9 T 11-10-2018 IPR000014 PAS domain Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SUPERFAMILY SSF55785 806 934 6.28E-13 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 560 686 1.1E-16 T 11-10-2018 IPR000014 PAS domain Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 688 811 5.9E-13 T 11-10-2018 IPR000014 PAS domain Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SUPERFAMILY SSF55785 574 687 1.54E-18 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1070 1159 6.2E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Gene3D G3DSA:3.30.450.20 562 689 9.4E-21 T 11-10-2018 Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Gene3D G3DSA:3.30.450.20 812 934 1.2E-14 T 11-10-2018 Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00387 1067 1161 1.5E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SUPERFAMILY SSF55785 675 797 1.22E-20 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Gene3D G3DSA:3.30.565.10 1030 1162 3.7E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Gene3D G3DSA:3.30.450.20 690 811 1.2E-23 T 11-10-2018 Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Pfam PF07730 Histidine kinase 964 1031 4.0E-17 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00086 639 679 0.0033 T 11-10-2018 IPR001610 PAC motif Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00086 764 805 24.0 T 11-10-2018 IPR001610 PAC motif Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 Pfam PF08448 PAS fold 697 806 2.5E-10 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SUPERFAMILY SSF55874 1042 1158 3.27E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00091 691 762 1.0E-5 T 11-10-2018 IPR000014 PAS domain Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00091 817 889 3.4 T 11-10-2018 IPR000014 PAS domain Tbd_1289 482b7d882d7a8ad6096cbbc122040203 1168 SMART SM00091 563 630 1.7E-5 T 11-10-2018 IPR000014 PAS domain Tbd_2297 0a61c58bb1ec862d65458f7b54e6fdd7 268 SUPERFAMILY SSF161098 72 258 4.45E-29 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2297 0a61c58bb1ec862d65458f7b54e6fdd7 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 21 267 3.3E-86 T 11-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Tbd_2297 0a61c58bb1ec862d65458f7b54e6fdd7 268 Gene3D G3DSA:1.10.3720.10 66 268 1.7E-26 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2297 0a61c58bb1ec862d65458f7b54e6fdd7 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 267 8.4E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_0235 7776e1a1ac7c6241ca1fe2d09d19c9b5 128 Gene3D G3DSA:3.40.250.10 1 128 3.0E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0235 7776e1a1ac7c6241ca1fe2d09d19c9b5 128 Pfam PF00581 Rhodanese-like domain 6 104 3.8E-12 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0235 7776e1a1ac7c6241ca1fe2d09d19c9b5 128 SUPERFAMILY SSF52821 2 127 1.31E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0235 7776e1a1ac7c6241ca1fe2d09d19c9b5 128 SMART SM00450 5 111 2.4E-13 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 SUPERFAMILY SSF109604 158 324 1.26E-31 T 11-10-2018 Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 SMART SM00471 158 294 2.2E-9 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 Gene3D G3DSA:1.10.3210.10 26 326 5.4E-73 T 11-10-2018 Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 Pfam PF13487 HD domain 213 275 4.4E-16 T 11-10-2018 Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 TIGRFAM TIGR00277 HDIG: HDIG domain 162 252 1.3E-9 T 11-10-2018 IPR006675 HDIG domain Tbd_1495 c7bb1e9b263849c9be02b3efc56cbd64 404 Pfam PF11871 Domain of unknown function (DUF3391) 2 131 1.8E-35 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 Gene3D G3DSA:3.40.640.10 16 255 2.4E-94 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 SUPERFAMILY SSF53383 2 357 4.69E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 Gene3D G3DSA:3.90.1150.10 256 359 7.7E-41 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 358 2.4E-164 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 Pfam PF00266 Aminotransferase class-V 3 347 3.2E-61 T 11-10-2018 IPR000192 Aminotransferase class V domain Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 358 53.133 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Tbd_0949 6f7d18d04f24e2157b544e7a7cf5cbc4 359 PIRSF PIRSF000525 1 359 1.9E-158 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 Pfam PF08282 haloacid dehalogenase-like hydrolase 78 148 1.1E-7 T 11-10-2018 Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 Gene3D G3DSA:3.40.50.1000 1 171 2.1E-53 T 11-10-2018 IPR023214 HAD superfamily Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 SUPERFAMILY SSF56784 8 168 3.68E-41 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 12 164 2.4E-47 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 PIRSF PIRSF006118 1 174 3.9E-63 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0537 bc32e1a16280d9ce5b01a8dbad2901ae 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 13 126 8.5E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 SUPERFAMILY SSF143975 3 420 2.48E-131 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 SUPERFAMILY SSF52016 421 613 3.45E-60 T 11-10-2018 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 8.2E-249 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 Pfam PF00920 Dehydratase family 34 607 4.8E-217 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.836 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 Pfam PF01263 Aldose 1-epimerase 650 921 3.2E-46 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 Gene3D G3DSA:3.50.30.80 421 572 5.4E-55 T 11-10-2018 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 Gene3D G3DSA:2.70.98.10 631 924 1.4E-88 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tbd_2730 8e5c382dfdceb1a9b9c10023eab81203 925 SUPERFAMILY SSF74650 644 919 1.95E-69 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tbd_1829 bf528c46bf4c62c5b05c710782c79b48 132 SUPERFAMILY SSF101738 4 112 2.22E-44 T 11-10-2018 IPR036760 SspB-like superfamily Tbd_1829 bf528c46bf4c62c5b05c710782c79b48 132 Gene3D G3DSA:2.30.30.220 1 121 7.4E-46 T 11-10-2018 IPR036760 SspB-like superfamily Tbd_1829 bf528c46bf4c62c5b05c710782c79b48 132 PIRSF PIRSF005276 1 132 3.6E-46 T 11-10-2018 IPR007481 Stringent starvation protein B Tbd_1829 bf528c46bf4c62c5b05c710782c79b48 132 Pfam PF04386 Stringent starvation protein B 5 114 4.1E-30 T 11-10-2018 IPR007481 Stringent starvation protein B Tbd_2801 4db51ac0540f62a6c64e2bb4e3fc929a 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.3E-33 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tbd_2801 4db51ac0540f62a6c64e2bb4e3fc929a 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.0E-47 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Tbd_2801 4db51ac0540f62a6c64e2bb4e3fc929a 156 SUPERFAMILY SSF81573 63 121 6.93E-12 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Tbd_2801 4db51ac0540f62a6c64e2bb4e3fc929a 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.636 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tbd_2801 4db51ac0540f62a6c64e2bb4e3fc929a 156 Gene3D G3DSA:1.20.5.620 62 122 2.1E-15 T 11-10-2018 Tbd_2332 4a618272f7ac25e567131632683567e7 385 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 384 1.8E-117 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Tbd_2332 4a618272f7ac25e567131632683567e7 385 Gene3D G3DSA:3.30.9.50 80 268 1.1E-102 T 11-10-2018 Tbd_2332 4a618272f7ac25e567131632683567e7 385 SUPERFAMILY SSF51905 5 384 5.33E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2332 4a618272f7ac25e567131632683567e7 385 Pfam PF01494 FAD binding domain 7 339 1.7E-25 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Tbd_2332 4a618272f7ac25e567131632683567e7 385 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 293 306 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Tbd_2332 4a618272f7ac25e567131632683567e7 385 Gene3D G3DSA:3.50.50.60 8 335 1.1E-102 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2332 4a618272f7ac25e567131632683567e7 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 9.1E-20 T 11-10-2018 Tbd_2332 4a618272f7ac25e567131632683567e7 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 9.1E-20 T 11-10-2018 Tbd_2332 4a618272f7ac25e567131632683567e7 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 9.1E-20 T 11-10-2018 Tbd_2332 4a618272f7ac25e567131632683567e7 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 9.1E-20 T 11-10-2018 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 Pfam PF00677 Lumazine binding domain 3 85 5.0E-17 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 Pfam PF00677 Lumazine binding domain 98 182 6.8E-26 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 Gene3D G3DSA:2.40.30.20 100 201 5.0E-35 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 SUPERFAMILY SSF63380 92 196 1.87E-34 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 193 1.7E-58 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 PIRSF PIRSF000498 1 201 8.8E-71 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 SUPERFAMILY SSF63380 1 91 6.8E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_2189 a7a3e8fd137cc3113ae906b72aa0e3f6 201 Gene3D G3DSA:2.40.30.20 1 87 5.2E-23 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 558 174.453 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 107 2.5E-38 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 SUPERFAMILY SSF142019 89 295 5.36E-53 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 407 418 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Gene3D G3DSA:3.40.50.11540 135 272 4.5E-13 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Pfam PF10531 SLBB domain 289 336 4.6E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 SUPERFAMILY SSF46548 326 436 1.92E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 5 437 3.1E-164 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Gene3D G3DSA:1.10.1060.10 362 435 2.5E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Pfam PF13183 4Fe-4S dicluster domain 366 421 8.7E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2017 bf84d8dbf4380e6b25ec86fd543cde86 558 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 276 4.2E-46 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 SUPERFAMILY SSF52540 16 641 9.38E-125 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Pfam PF13245 AAA domain 40 291 7.0E-30 T 11-10-2018 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Gene3D G3DSA:3.40.50.300 316 638 2.8E-69 T 11-10-2018 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Gene3D G3DSA:1.10.486.10 417 562 2.8E-69 T 11-10-2018 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Pfam PF13361 UvrD-like helicase C-terminal domain 313 634 4.5E-38 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Gene3D G3DSA:3.40.50.300 24 305 3.3E-77 T 11-10-2018 Tbd_1306 4922614cd272fe5552624c2d4d594ee4 702 Gene3D G3DSA:1.10.10.160 139 224 3.3E-77 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Tbd_1492 6c55d85f987c3508e5a9f90f9c90690e 905 Gene3D G3DSA:3.40.50.300 90 357 1.4E-7 T 11-10-2018 Tbd_1492 6c55d85f987c3508e5a9f90f9c90690e 905 Pfam PF04851 Type III restriction enzyme, res subunit 93 338 1.5E-20 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tbd_1492 6c55d85f987c3508e5a9f90f9c90690e 905 Gene3D G3DSA:3.40.50.300 372 552 2.5E-16 T 11-10-2018 Tbd_1492 6c55d85f987c3508e5a9f90f9c90690e 905 SUPERFAMILY SSF52540 132 529 3.29E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 SMART SM00304 246 298 1.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 SUPERFAMILY SSF55073 324 517 1.48E-54 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 328 510 3.8E-32 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 Gene3D G3DSA:3.30.70.1230 318 529 3.2E-61 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 SMART SM00044 294 505 9.1E-22 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 Pfam PF00672 HAMP domain 246 294 9.8E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 Gene3D G3DSA:1.20.1480.50 206 303 2.4E-8 T 11-10-2018 Tbd_0671 82aeaadd7b4ed3c7137d53c6c28ea030 593 SUPERFAMILY SSF158472 246 295 2.22E-7 T 11-10-2018 Tbd_0809 42a7226300b1bb4387600bb5dfd1a8ef 281 Pfam PF13525 Outer membrane lipoprotein 51 253 1.1E-69 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Tbd_0809 42a7226300b1bb4387600bb5dfd1a8ef 281 SUPERFAMILY SSF48452 50 134 2.14E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0809 42a7226300b1bb4387600bb5dfd1a8ef 281 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 24 266 1.5E-91 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Tbd_0809 42a7226300b1bb4387600bb5dfd1a8ef 281 Gene3D G3DSA:1.25.40.10 50 270 5.7E-58 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0809 42a7226300b1bb4387600bb5dfd1a8ef 281 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 19 261 39.143 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Tbd_1808 13b71bdae74ca5bd7f57391c9d72bebb 352 SUPERFAMILY SSF56349 60 349 2.33E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_1808 13b71bdae74ca5bd7f57391c9d72bebb 352 Gene3D G3DSA:1.10.443.10 163 352 2.5E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_1808 13b71bdae74ca5bd7f57391c9d72bebb 352 Gene3D G3DSA:1.10.150.130 29 162 3.9E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_1808 13b71bdae74ca5bd7f57391c9d72bebb 352 Pfam PF00589 Phage integrase family 164 344 5.7E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Gene3D G3DSA:3.30.470.20 191 343 7.5E-52 T 11-10-2018 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 SUPERFAMILY SSF56059 2 375 3.53E-106 T 11-10-2018 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 777 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 SUPERFAMILY SSF52009 340 458 1.83E-33 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 685 703 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Gene3D G3DSA:3.50.30.10 351 467 1.4E-40 T 11-10-2018 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 SUPERFAMILY SSF51621 453 778 1.41E-96 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Pfam PF00391 PEP-utilising enzyme, mobile domain 375 446 1.3E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Gene3D G3DSA:3.20.20.60 470 778 1.8E-99 T 11-10-2018 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 471 777 1.6E-61 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 PIRSF PIRSF000854 1 779 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Gene3D G3DSA:3.30.1490.20 1 190 2.0E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 333 1.2E-110 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tbd_0618 dbff2142571a3e6e014a98d3c453ee1f 779 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 405 416 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Gene3D G3DSA:3.40.50.720 7 100 1.0E-23 T 11-10-2018 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 SUPERFAMILY SSF53244 327 467 1.79E-44 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 SUPERFAMILY SSF53623 122 325 1.83E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Pfam PF08245 Mur ligase middle domain 132 307 3.6E-26 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Gene3D G3DSA:3.40.1190.10 117 327 4.5E-59 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 11 467 33.89 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Gene3D G3DSA:3.90.190.20 332 466 1.3E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 399 6.2E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 SUPERFAMILY SSF51984 7 100 6.47E-18 T 11-10-2018 Tbd_0117 82f0b652cf61e081522c57f398dbeeaa 474 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 465 3.8E-122 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_2717 cb5cd18aa659703080c8744d152fc11f 215 SUPERFAMILY SSF55469 14 213 8.11E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tbd_2717 cb5cd18aa659703080c8744d152fc11f 215 Gene3D G3DSA:3.40.109.10 1 189 1.8E-43 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tbd_2717 cb5cd18aa659703080c8744d152fc11f 215 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 1.7E-74 T 11-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 Tbd_2717 cb5cd18aa659703080c8744d152fc11f 215 Pfam PF00881 Nitroreductase family 18 181 3.1E-28 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tbd_0994 3d78fef7bc9d64f45e030463d962f651 559 Pfam PF03109 ABC1 family 120 237 1.9E-33 T 11-10-2018 IPR004147 UbiB domain Tbd_0994 3d78fef7bc9d64f45e030463d962f651 559 Pfam PF01636 Phosphotransferase enzyme family 278 317 3.5E-5 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Tbd_0994 3d78fef7bc9d64f45e030463d962f651 559 SUPERFAMILY SSF56112 116 437 1.08E-26 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 Pfam PF00625 Guanylate kinase 10 184 2.2E-50 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 Gene3D G3DSA:3.40.50.300 12 185 9.7E-69 T 11-10-2018 Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 9 186 1.6E-72 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 SMART SM00072 7 189 1.4E-61 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 SUPERFAMILY SSF52540 6 193 2.7E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 Gene3D G3DSA:3.30.63.10 39 98 9.7E-69 T 11-10-2018 Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 ProSitePatterns PS00856 Guanylate kinase-like signature. 42 59 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Tbd_0473 bda4a2dc4fd58b7ebeaab6f6adf82fd6 209 Hamap MF_00328 Guanylate kinase [gmk]. 6 189 36.647 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 184 190 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PIRSF PIRSF000110 1 496 1.3E-184 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 SUPERFAMILY SSF51735 11 197 1.02E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 Gene3D G3DSA:3.40.50.720 16 442 5.5E-174 T 11-10-2018 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 17 194 9.7E-59 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 244 260 7.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 335 361 7.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 174 202 7.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 150 163 7.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 243 7.2E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 13 494 1.4E-179 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 Gene3D G3DSA:3.30.360.10 184 484 5.5E-174 T 11-10-2018 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 196 493 4.0E-113 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 13 494 77.736 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Tbd_2122 02b6e47eaeec69b4885fb0f3568c329f 496 SUPERFAMILY SSF55347 189 493 7.52E-112 T 11-10-2018 Tbd_2627 03baa57391f9d8e886520b7950919abd 278 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 25 259 2.6E-40 T 11-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Tbd_2627 03baa57391f9d8e886520b7950919abd 278 Gene3D G3DSA:3.90.1070.10 113 179 1.7E-50 T 11-10-2018 Tbd_2627 03baa57391f9d8e886520b7950919abd 278 SUPERFAMILY SSF56784 26 260 7.38E-27 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2627 03baa57391f9d8e886520b7950919abd 278 Gene3D G3DSA:3.40.50.1000 27 256 1.7E-50 T 11-10-2018 IPR023214 HAD superfamily Tbd_1003 4db432e44957312400a3b5a421b30695 233 Gene3D G3DSA:3.90.550.10 1 231 4.0E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1003 4db432e44957312400a3b5a421b30695 233 SUPERFAMILY SSF53448 2 229 1.26E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1003 4db432e44957312400a3b5a421b30695 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 228 40.959 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tbd_1003 4db432e44957312400a3b5a421b30695 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 229 6.5E-60 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tbd_1003 4db432e44957312400a3b5a421b30695 233 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 103 110 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tbd_1003 4db432e44957312400a3b5a421b30695 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 228 8.8E-65 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tbd_2569 ee263edfef6e71ef35d409a252649b7c 160 Gene3D G3DSA:3.40.30.10 28 156 2.5E-10 T 11-10-2018 Tbd_2569 ee263edfef6e71ef35d409a252649b7c 160 Pfam PF13098 Thioredoxin-like domain 42 142 4.4E-10 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_2569 ee263edfef6e71ef35d409a252649b7c 160 SUPERFAMILY SSF52833 34 152 3.14E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 SUPERFAMILY SSF56784 7 220 3.6E-57 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 131 195 4.0E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 Gene3D G3DSA:3.40.50.1000 11 215 5.2E-56 T 11-10-2018 IPR023214 HAD superfamily Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 6.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 6.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 6.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 6.9E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 219 2.4E-65 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 194 5.8E-34 T 11-10-2018 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 Gene3D G3DSA:1.10.150.240 23 94 5.2E-56 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 225 39.67 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 ProSitePatterns PS01228 Hypothetical cof family signature 1. 10 21 - T 11-10-2018 Tbd_2229 032cf300b1b295d1b020ed2d646111c8 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 189 3.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_1898 9c6592304a4f7409bc4228f2457c9977 155 Pfam PF02470 MlaD protein 38 116 1.3E-22 T 11-10-2018 IPR003399 Mce/MlaD Tbd_1898 9c6592304a4f7409bc4228f2457c9977 155 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 146 7.9E-59 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Tbd_0034 accd376bfb8ef4f3856a3adf0ad3bc7d 836 Pfam PF12705 PD-(D/E)XK nuclease superfamily 588 830 1.2E-39 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Tbd_0034 accd376bfb8ef4f3856a3adf0ad3bc7d 836 Gene3D G3DSA:3.90.320.10 694 833 1.4E-6 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Tbd_0034 accd376bfb8ef4f3856a3adf0ad3bc7d 836 SUPERFAMILY SSF52540 212 543 9.86E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0034 accd376bfb8ef4f3856a3adf0ad3bc7d 836 SUPERFAMILY SSF52980 586 745 9.65E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tbd_2508 841ce9dec4f2cf84f01e10eb9d0a9a92 251 SUPERFAMILY SSF52402 22 245 1.72E-48 T 11-10-2018 Tbd_2508 841ce9dec4f2cf84f01e10eb9d0a9a92 251 Gene3D G3DSA:3.40.50.620 11 248 3.3E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2508 841ce9dec4f2cf84f01e10eb9d0a9a92 251 PIRSF PIRSF004976 4 249 6.3E-59 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Tbd_2508 841ce9dec4f2cf84f01e10eb9d0a9a92 251 Pfam PF01171 PP-loop family 36 200 2.9E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 Pfam PF00691 OmpA family 119 213 1.0E-20 T 11-10-2018 IPR006665 OmpA-like domain Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 ProSitePatterns PS01068 OmpA-like domain. 151 195 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 Gene3D G3DSA:3.30.1330.60 76 224 3.2E-42 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 PRINTS PR01021 OMPA domain signature 119 141 7.3E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 PRINTS PR01021 OMPA domain signature 149 164 7.3E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 PRINTS PR01021 OMPA domain signature 164 180 7.3E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 Pfam PF13441 YMGG-like Gly-zipper 32 77 2.5E-12 T 11-10-2018 IPR027367 YMGG-like Gly-zipper Tbd_2341 20771ff81c9c426844dca9ca6a5110f8 225 SUPERFAMILY SSF103088 108 222 3.79E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 ProSitePatterns PS00450 Aconitase family signature 1. 472 488 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 SUPERFAMILY SSF53732 4 671 4.58E-210 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 SUPERFAMILY SSF52016 676 937 2.55E-76 T 11-10-2018 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Gene3D G3DSA:3.30.499.20 5 367 8.0E-158 T 11-10-2018 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 367 381 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 211 226 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 538 551 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 168 176 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 287 300 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 476 487 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 144 157 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 273 286 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 PRINTS PR00415 Aconitase family signature 197 210 3.7E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Gene3D G3DSA:3.30.499.10 435 635 8.5E-84 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Pfam PF00330 Aconitase family (aconitate hydratase) 67 607 9.2E-172 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Gene3D G3DSA:1.10.1440.20 636 695 1.4E-15 T 11-10-2018 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Pfam PF00694 Aconitase C-terminal domain 740 865 1.9E-41 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 ProSitePatterns PS01244 Aconitase family signature 2. 538 551 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tbd_0891 322d2ce75430d1dba91d3580f10316b3 939 Gene3D G3DSA:3.20.19.10 703 938 5.4E-97 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 362 2.5E-28 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 Gene3D G3DSA:3.40.47.10 258 401 1.9E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 SUPERFAMILY SSF53901 218 405 2.88E-50 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 SMART SM00825 Beta-ketoacyl synthase 18 406 5.6E-11 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 102 242 1.3E-24 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 SUPERFAMILY SSF53901 20 244 4.98E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_2753 a3e7b0c8e12d2e40d8741ec2e203108b 406 Gene3D G3DSA:3.40.47.10 17 255 1.3E-32 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 36.995 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 SUPERFAMILY SSF50249 3 157 1.95E-57 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 Gene3D G3DSA:2.40.50.140 1 119 7.3E-47 T 11-10-2018 Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 Pfam PF00436 Single-strand binding protein family 4 107 7.1E-41 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 PIRSF PIRSF002070 1 154 2.1E-37 T 11-10-2018 Tbd_0438 ae361ff66d4b23e43bcf72c73a1f457b 157 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 157 5.9E-55 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF01103 Surface antigen 453 770 1.9E-85 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:3.10.20.310 180 271 7.2E-26 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 5 770 25.938 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 29 770 7.7E-279 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:3.10.20.310 272 348 1.3E-18 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:3.10.20.310 353 429 1.7E-25 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 PIRSF PIRSF006076 1 770 3.8E-269 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:3.10.20.310 23 96 4.0E-21 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:3.10.20.310 97 177 3.2E-17 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Gene3D G3DSA:2.40.160.50 430 770 4.4E-115 T 11-10-2018 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF07244 Surface antigen variable number repeat 98 177 1.0E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF07244 Surface antigen variable number repeat 181 268 4.1E-18 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF07244 Surface antigen variable number repeat 30 95 2.4E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF07244 Surface antigen variable number repeat 271 349 3.9E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tbd_0793 f23026c9560bc9e85ff4c6b315b1f39e 770 Pfam PF07244 Surface antigen variable number repeat 352 425 7.0E-15 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 146 248 1.9E-30 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 SUPERFAMILY SSF63848 144 250 1.31E-28 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 13 251 2.4E-55 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 Gene3D G3DSA:3.30.750.120 9 125 2.8E-10 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 251 24.035 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 Gene3D G3DSA:2.160.20.70 141 251 6.1E-33 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Tbd_2302 e1aa38c832b90cc8588bdf0608088ee7 251 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 13 110 3.7E-5 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Tbd_1879 c45f187712988479da160e20b6ae4f6f 440 SUPERFAMILY SSF53383 37 433 2.04E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1879 c45f187712988479da160e20b6ae4f6f 440 Gene3D G3DSA:3.90.1150.10 308 440 1.7E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1879 c45f187712988479da160e20b6ae4f6f 440 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 45 430 1.4E-109 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tbd_1879 c45f187712988479da160e20b6ae4f6f 440 PIRSF PIRSF000390 18 437 3.7E-120 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Tbd_1879 c45f187712988479da160e20b6ae4f6f 440 Gene3D G3DSA:3.40.640.10 4 307 2.6E-105 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0532 e3af6c8245d112394b813b530dfe0fdd 111 Gene3D G3DSA:3.30.160.100 1 104 1.1E-34 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tbd_0532 e3af6c8245d112394b813b530dfe0fdd 111 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.6E-32 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tbd_0532 e3af6c8245d112394b813b530dfe0fdd 111 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 2.6E-26 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tbd_0532 e3af6c8245d112394b813b530dfe0fdd 111 SUPERFAMILY SSF69754 1 97 1.96E-34 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 Gene3D G3DSA:3.20.20.70 27 253 9.2E-48 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 PIRSF PIRSF037420 15 389 9.8E-138 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 SMART SM00729 26 228 0.0037 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 SUPERFAMILY SSF102114 24 350 2.88E-70 T 11-10-2018 Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 284 370 5.7E-8 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 Pfam PF13353 4Fe-4S single cluster domain 28 119 1.9E-9 T 11-10-2018 Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 Pfam PF04055 Radical SAM superfamily 32 185 5.0E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0071 46ecc44f06b1c1b449604a560e08901e 399 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 25 378 7.5E-200 T 11-10-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.2090.10 182 273 3.6E-254 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82693 138 327 5.75E-21 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82714 722 806 4.05E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.70.1440 671 868 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.8E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.70.1320 135 327 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82714 185 269 1.44E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82866 805 1044 1.96E-46 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.70.1430 568 670 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.2090.10 722 810 3.6E-254 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:1.20.1640.10 15 516 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:3.30.70.1430 42 818 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82866 293 505 3.01E-38 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 SUPERFAMILY SSF82693 46 127 9.42E-20 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Gene3D G3DSA:1.20.1640.10 517 1036 3.6E-254 T 11-10-2018 Tbd_1333 6b882a2f0971ead339f5e4a6a442373f 1060 Pfam PF00873 AcrB/AcrD/AcrF family 6 1039 4.4E-228 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_0753 a389202625cbb20748633e417ac3f90c 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 9.4E-28 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_0753 a389202625cbb20748633e417ac3f90c 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 4.3E-28 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_0753 a389202625cbb20748633e417ac3f90c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 4.6E-13 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0753 a389202625cbb20748633e417ac3f90c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 4.6E-13 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0753 a389202625cbb20748633e417ac3f90c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 4.6E-13 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0753 a389202625cbb20748633e417ac3f90c 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 4.6E-13 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0753 a389202625cbb20748633e417ac3f90c 407 Gene3D G3DSA:1.20.81.30 258 373 7.1E-27 T 11-10-2018 Tbd_0753 a389202625cbb20748633e417ac3f90c 407 Gene3D G3DSA:1.20.81.30 59 175 4.0E-29 T 11-10-2018 Tbd_0282 d520c4bb1f55e8d450a3dbe15d10e5a1 511 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 6 504 1.7E-212 T 11-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant Tbd_0282 d520c4bb1f55e8d450a3dbe15d10e5a1 511 Pfam PF13807 G-rich domain on putative tyrosine kinase 360 441 4.9E-9 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain Tbd_0282 d520c4bb1f55e8d450a3dbe15d10e5a1 511 Pfam PF02706 Chain length determinant protein 14 93 3.3E-6 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 456 7.9E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 SUPERFAMILY SSF55874 333 457 1.96E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 Gene3D G3DSA:3.30.565.10 332 457 5.0E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 Pfam PF07730 Histidine kinase 260 328 3.3E-10 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 SMART SM00387 366 457 1.7E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2235 aa70dc7ea0b49b7834e615f8f4168fa1 457 Gene3D G3DSA:1.20.1440.210 60 189 2.4E-5 T 11-10-2018 Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 Gene3D G3DSA:3.10.129.10 1 132 9.5E-44 T 11-10-2018 Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 3 127 2.4E-52 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 Pfam PF03061 Thioesterase superfamily 17 102 1.7E-20 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 SUPERFAMILY SSF54637 1 131 3.36E-43 T 11-10-2018 IPR029069 HotDog domain superfamily Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 PIRSF PIRSF003230 1 132 1.6E-43 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Tbd_2210 3988ee6f6f2e369b9a348ace29f2fb7c 133 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 122 2.4E-37 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 SUPERFAMILY SSF109604 12 217 1.32E-8 T 11-10-2018 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 Gene3D G3DSA:1.10.287.130 423 478 1.2E-6 T 11-10-2018 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 SUPERFAMILY SSF55874 490 636 8.64E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 SMART SM00387 529 639 4.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 Gene3D G3DSA:3.30.565.10 488 641 2.7E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 637 4.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 636 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 618 3.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0084 b1b4f54bd3de123776250e873c1a91e3 653 SUPERFAMILY SSF47384 420 475 3.53E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2182 1f58135266797107e55926e409976349 414 SUPERFAMILY SSF51412 17 337 2.01E-35 T 11-10-2018 Tbd_2182 1f58135266797107e55926e409976349 414 Pfam PF03060 Nitronate monooxygenase 166 306 2.7E-26 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tbd_2182 1f58135266797107e55926e409976349 414 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Tbd_2182 1f58135266797107e55926e409976349 414 Gene3D G3DSA:3.20.20.70 16 387 4.0E-47 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 6.0E-66 T 11-10-2018 Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 SUPERFAMILY SSF51735 13 255 3.46E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 17 254 4.9E-102 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 Gene3D G3DSA:3.40.50.720 6 256 8.6E-85 T 11-10-2018 Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.2E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1549 48edd2e9dbce7d510aedb643de98c9e7 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 198 1.5E-5 T 11-10-2018 Tbd_1778 d8dd3b917111e16664a18569bcd9ff93 180 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 176 3.6E-82 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Tbd_1778 d8dd3b917111e16664a18569bcd9ff93 180 Gene3D G3DSA:2.60.120.10 1 180 2.9E-74 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1778 d8dd3b917111e16664a18569bcd9ff93 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 6.0E-102 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Tbd_1778 d8dd3b917111e16664a18569bcd9ff93 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 6.2E-74 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Tbd_1778 d8dd3b917111e16664a18569bcd9ff93 180 SUPERFAMILY SSF51182 1 177 1.21E-78 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_1738 2718321f4a445480884dea7911d66c5a 429 Gene3D G3DSA:3.50.50.60 19 414 4.5E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1738 2718321f4a445480884dea7911d66c5a 429 PRINTS PR00419 Adrenodoxin reductase family signature 41 54 2.9E-7 T 11-10-2018 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 PRINTS PR00419 Adrenodoxin reductase family signature 18 40 2.9E-7 T 11-10-2018 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 39 421 2.7E-158 T 11-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 SUPERFAMILY SSF160996 218 362 6.67E-9 T 11-10-2018 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 Gene3D G3DSA:2.40.30.10 205 363 4.5E-65 T 11-10-2018 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 19 415 6.9E-81 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Tbd_1738 2718321f4a445480884dea7911d66c5a 429 Pfam PF03486 HI0933-like protein 18 415 1.0E-106 T 11-10-2018 Tbd_1738 2718321f4a445480884dea7911d66c5a 429 SUPERFAMILY SSF51905 19 421 1.81E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1738 2718321f4a445480884dea7911d66c5a 429 Gene3D G3DSA:1.10.8.260 290 346 4.5E-65 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 Gene3D G3DSA:3.30.1330.10 4 169 2.2E-49 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 SUPERFAMILY SSF55326 10 167 1.57E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 353 4.1E-27 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 SUPERFAMILY SSF56042 172 353 5.68E-45 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 Hamap MF_00625 Selenide, water dikinase [selD]. 8 354 42.986 T 11-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 164 6.9E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 Gene3D G3DSA:3.90.650.10 171 354 4.0E-49 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 PIRSF PIRSF036407 4 354 4.1E-111 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tbd_1021 0c422e72cabec3f8f250c031d404de67 355 TIGRFAM TIGR00476 selD: selenide, water dikinase 10 322 3.5E-129 T 11-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tbd_0309 11cfc936f1cca2f680f02b66f63c2b7d 318 Pfam PF00535 Glycosyl transferase family 2 8 128 2.4E-32 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0309 11cfc936f1cca2f680f02b66f63c2b7d 318 SUPERFAMILY SSF53448 5 220 2.1E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0309 11cfc936f1cca2f680f02b66f63c2b7d 318 Gene3D G3DSA:3.90.550.10 1 240 1.7E-65 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0187 42b92a778e5721414548af322495a903 208 PIRSF PIRSF000005 1 208 3.5E-67 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Tbd_0187 42b92a778e5721414548af322495a903 208 Pfam PF00034 Cytochrome c 122 206 3.7E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0187 42b92a778e5721414548af322495a903 208 Gene3D G3DSA:1.10.760.10 112 208 3.1E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0187 42b92a778e5721414548af322495a903 208 SUPERFAMILY SSF46626 118 206 1.75E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0187 42b92a778e5721414548af322495a903 208 SUPERFAMILY SSF46626 6 111 4.34E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0187 42b92a778e5721414548af322495a903 208 Gene3D G3DSA:1.10.760.10 33 108 9.2E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0187 42b92a778e5721414548af322495a903 208 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 30 103 8.4E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0253 002b2adbf83200efe47b7a48ef8304d9 462 Pfam PF07690 Major Facilitator Superfamily 38 292 7.0E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_0253 002b2adbf83200efe47b7a48ef8304d9 462 Gene3D G3DSA:1.20.1250.20 262 461 3.5E-12 T 11-10-2018 Tbd_0253 002b2adbf83200efe47b7a48ef8304d9 462 SUPERFAMILY SSF103473 12 453 4.32E-32 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_0253 002b2adbf83200efe47b7a48ef8304d9 462 Gene3D G3DSA:1.20.1250.20 14 223 5.8E-10 T 11-10-2018 Tbd_1453 6381073ade8ce50be5dc602ae6dfea04 490 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 26 172 6.3E-46 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain Tbd_1453 6381073ade8ce50be5dc602ae6dfea04 490 Pfam PF07478 D-ala D-ala ligase C-terminus 308 454 9.4E-6 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_1453 6381073ade8ce50be5dc602ae6dfea04 490 SUPERFAMILY SSF56059 273 460 1.71E-32 T 11-10-2018 Tbd_1453 6381073ade8ce50be5dc602ae6dfea04 490 Gene3D G3DSA:3.30.1490.20 283 361 3.7E-7 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_1453 6381073ade8ce50be5dc602ae6dfea04 490 Gene3D G3DSA:3.30.470.20 363 479 9.6E-18 T 11-10-2018 Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 SMART SM00490 441 521 3.3E-22 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 SMART SM00487 11 206 1.6E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 Pfam PF00271 Helicase conserved C-terminal domain 413 521 4.0E-18 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 Gene3D G3DSA:3.40.50.300 277 602 9.2E-41 T 11-10-2018 Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 SUPERFAMILY SSF52540 13 208 1.25E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 Pfam PF00176 SNF2 family N-terminal domain 26 237 4.8E-32 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 Gene3D G3DSA:3.40.50.10810 11 276 3.9E-58 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Tbd_0933 af1d23248632e78b0825d93b2f2fc496 932 SUPERFAMILY SSF52540 132 565 1.04E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0685 00921d9591103f745c10f3e702eea559 235 SMART SM00382 42 228 1.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0685 00921d9591103f745c10f3e702eea559 235 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0685 00921d9591103f745c10f3e702eea559 235 Gene3D G3DSA:3.40.50.300 11 235 2.9E-65 T 11-10-2018 Tbd_0685 00921d9591103f745c10f3e702eea559 235 SUPERFAMILY SSF52540 14 232 6.93E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0685 00921d9591103f745c10f3e702eea559 235 Pfam PF00005 ABC transporter 33 179 1.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1532 23bbe06f1679829ea4d47957465dba25 274 Pfam PF13616 PPIC-type PPIASE domain 146 236 6.7E-21 T 11-10-2018 Tbd_1532 23bbe06f1679829ea4d47957465dba25 274 Gene3D G3DSA:3.10.50.40 136 261 1.3E-31 T 11-10-2018 Tbd_1532 23bbe06f1679829ea4d47957465dba25 274 SUPERFAMILY SSF54534 128 235 3.32E-28 T 11-10-2018 Tbd_1532 23bbe06f1679829ea4d47957465dba25 274 SUPERFAMILY SSF109998 38 174 1.22E-15 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 Gene3D G3DSA:3.40.1440.10 196 289 3.1E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 SUPERFAMILY SSF53098 3 183 5.06E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 Pfam PF00929 Exonuclease 12 159 3.1E-33 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 SMART SM00479 9 174 2.7E-46 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 Gene3D G3DSA:3.30.420.10 4 180 8.0E-50 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 13 176 9.7E-29 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 Pfam PF01541 GIY-YIG catalytic domain 207 278 3.7E-6 T 11-10-2018 IPR000305 GIY-YIG endonuclease Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 SMART SM00465 205 286 4.3E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease Tbd_0827 c6d8ff0d896bb62599d88db77f574916 470 SUPERFAMILY SSF82771 205 285 3.66E-13 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 PIRSF PIRSF002211 1 61 1.6E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 61 19.671 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 3.5E-18 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 60 2.2E-21 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 Gene3D G3DSA:3.30.1390.20 3 60 5.0E-24 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Tbd_0423 2ff48dc2c034adfc9b5047369a3aa96c 61 SUPERFAMILY SSF55129 5 60 5.1E-20 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 Gene3D G3DSA:3.40.50.2000 8 489 2.8E-175 T 11-10-2018 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 Gene3D G3DSA:3.40.50.2000 259 475 2.8E-175 T 11-10-2018 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 Pfam PF08323 Starch synthase catalytic domain 7 245 3.8E-77 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 6 489 3.5E-165 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 Hamap MF_00484 Glycogen synthase [glgA]. 6 491 44.058 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 Pfam PF00534 Glycosyl transferases group 1 306 457 7.4E-18 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_2057 f1e972a925c47afb269c6cb0b34f2a64 498 SUPERFAMILY SSF53756 5 491 1.04E-120 T 11-10-2018 Tbd_0737 963c8438cfec912f29cd997c2da416d4 370 Gene3D G3DSA:3.40.50.2000 177 358 6.0E-35 T 11-10-2018 Tbd_0737 963c8438cfec912f29cd997c2da416d4 370 Gene3D G3DSA:3.40.50.2000 6 165 3.8E-11 T 11-10-2018 Tbd_0737 963c8438cfec912f29cd997c2da416d4 370 SUPERFAMILY SSF53756 10 357 3.61E-61 T 11-10-2018 Tbd_0737 963c8438cfec912f29cd997c2da416d4 370 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 160 297 1.4E-18 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 SMART SM00481 7 74 1.2E-18 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Gene3D G3DSA:3.20.20.140 1 270 9.5E-85 T 11-10-2018 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Gene3D G3DSA:1.10.10.1600 434 511 5.9E-26 T 11-10-2018 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 SUPERFAMILY SSF89550 6 263 2.16E-11 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Pfam PF02811 PHP domain 8 172 1.3E-40 T 11-10-2018 IPR004013 PHP domain GO:0003824 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Gene3D G3DSA:2.40.50.140 967 1062 1.4E-6 T 11-10-2018 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1015 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Pfam PF14579 Helix-hairpin-helix motif 801 890 1.3E-27 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 727 7.0E-174 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0858 9aa7535f98cda42d5d40a43a57b14aab 1141 Pfam PF01336 OB-fold nucleic acid binding domain 981 1057 1.1E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Pfam PF13361 UvrD-like helicase C-terminal domain 272 609 1.3E-64 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 266 5.4E-66 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Gene3D G3DSA:3.40.50.300 8 267 9.2E-89 T 11-10-2018 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Gene3D G3DSA:3.40.50.300 275 628 1.4E-116 T 11-10-2018 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 5 660 38.066 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 SUPERFAMILY SSF52540 4 632 1.63E-156 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Gene3D G3DSA:1.10.486.10 378 540 1.4E-116 T 11-10-2018 Tbd_0166 39e6053df45b32cfb352a9c2a8079116 660 Gene3D G3DSA:1.10.10.160 112 182 9.2E-89 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Tbd_1623 c06d85ff2ac77ca1cc84cad7b0dfc1ed 167 SUPERFAMILY SSF50341 18 159 1.7E-40 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tbd_1623 c06d85ff2ac77ca1cc84cad7b0dfc1ed 167 SMART SM00260 17 154 3.8E-42 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1623 c06d85ff2ac77ca1cc84cad7b0dfc1ed 167 Pfam PF01584 CheW-like domain 21 157 5.4E-37 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1623 c06d85ff2ac77ca1cc84cad7b0dfc1ed 167 Gene3D G3DSA:2.40.50.180 40 149 1.7E-41 T 11-10-2018 Tbd_1623 c06d85ff2ac77ca1cc84cad7b0dfc1ed 167 Gene3D G3DSA:2.30.30.40 24 148 1.7E-41 T 11-10-2018 Tbd_2772 97918004f226eddcd1caf2897a9129b5 55 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 5.7E-12 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2772 97918004f226eddcd1caf2897a9129b5 55 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 55 18.989 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2772 97918004f226eddcd1caf2897a9129b5 55 PIRSF PIRSF036466 1 54 6.1E-19 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_0062 5c858874def1eaf8003f855db1a74b1a 133 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 5 119 3.1E-49 T 11-10-2018 IPR018714 Protein of unknown function DUF2237 Tbd_0062 5c858874def1eaf8003f855db1a74b1a 133 Gene3D G3DSA:3.30.56.110 3 125 1.5E-49 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 459 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 1.6E-48 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 Gene3D G3DSA:3.50.50.60 160 286 3.2E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 335 8.6E-52 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 SUPERFAMILY SSF55424 356 466 2.06E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 Gene3D G3DSA:3.50.50.60 10 342 3.2E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PIRSF PIRSF000350 2 467 2.2E-100 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 SUPERFAMILY SSF51905 7 345 8.31E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 Gene3D G3DSA:3.30.390.30 355 469 9.8E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 462 1.7E-22 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.4E-25 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 1.4E-25 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 1.4E-25 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.4E-25 T 11-10-2018 Tbd_1472 dcba3d7f876331454f1f16d242a0a034 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.4E-25 T 11-10-2018 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Gene3D G3DSA:3.30.470.20 87 433 5.4E-153 T 11-10-2018 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.0E-229 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 2.8E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 SUPERFAMILY SSF56059 83 348 4.07E-72 T 11-10-2018 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 SMART SM00878 336 441 4.1E-63 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.9E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 SUPERFAMILY SSF52440 1 113 1.22E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Gene3D G3DSA:3.40.50.20 1 85 6.2E-36 T 11-10-2018 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 SUPERFAMILY SSF51246 331 443 4.34E-41 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.5E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0181 e71b5afbe2081b5238ab970f5344e8a0 449 Gene3D G3DSA:3.30.1490.20 131 203 5.4E-153 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_2641 0187c36bf628d4820bb9ef73985251f2 212 SUPERFAMILY SSF52540 3 211 1.07E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2641 0187c36bf628d4820bb9ef73985251f2 212 Gene3D G3DSA:3.40.50.300 6 212 1.0E-46 T 11-10-2018 Tbd_2641 0187c36bf628d4820bb9ef73985251f2 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 185 2.4E-14 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tbd_2641 0187c36bf628d4820bb9ef73985251f2 212 PIRSF PIRSF009320 3 212 1.6E-39 T 11-10-2018 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.548 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.4E-25 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.7E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 SMART SM00649 9 141 1.7E-85 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 Gene3D G3DSA:1.10.10.250 73 141 3.9E-28 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 SUPERFAMILY SSF54747 3 73 1.57E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.1E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 Gene3D G3DSA:3.30.1550.10 2 72 7.5E-35 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 11-10-2018 Tbd_0394 69278efd7db6419aa4ac433745f4f1a7 143 SUPERFAMILY SSF46906 68 141 9.81E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.0E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.6E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 SUPERFAMILY SSF48498 101 204 1.38E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 108 206 9.8E-14 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 Gene3D G3DSA:1.10.357.10 15 215 3.9E-36 T 11-10-2018 Tbd_1419 a39e9efbac3ce195b56dd1ed673372a8 220 SUPERFAMILY SSF46689 16 89 7.09E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0625 ae9ca6a5bf7ebc68fdef66c47af94cc6 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 3.2E-113 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Tbd_0625 ae9ca6a5bf7ebc68fdef66c47af94cc6 289 SUPERFAMILY SSF53448 5 275 6.08E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0625 ae9ca6a5bf7ebc68fdef66c47af94cc6 289 Gene3D G3DSA:3.90.550.10 1 289 2.7E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0625 ae9ca6a5bf7ebc68fdef66c47af94cc6 289 Pfam PF00483 Nucleotidyl transferase 11 266 5.3E-28 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_0525 a1aa360dc7aa1551d92a89ad164cadd2 194 SMART SM00464 5 191 1.0E-12 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_0525 a1aa360dc7aa1551d92a89ad164cadd2 194 SUPERFAMILY SSF88697 6 190 5.22E-48 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0525 a1aa360dc7aa1551d92a89ad164cadd2 194 Gene3D G3DSA:1.10.4060.10 114 194 1.7E-11 T 11-10-2018 Tbd_0525 a1aa360dc7aa1551d92a89ad164cadd2 194 Gene3D G3DSA:2.30.130.40 4 113 1.7E-33 T 11-10-2018 Tbd_0525 a1aa360dc7aa1551d92a89ad164cadd2 194 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 191 1.9E-20 T 11-10-2018 IPR003111 Lon, substrate-binding domain Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 Gene3D G3DSA:3.40.190.10 31 250 4.6E-79 T 11-10-2018 Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 PIRSF PIRSF004846 3 252 6.3E-47 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 249 1.7E-66 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 SUPERFAMILY SSF53850 26 250 3.43E-60 T 11-10-2018 Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 Pfam PF13531 Bacterial extracellular solute-binding protein 28 250 2.3E-44 T 11-10-2018 Tbd_1283 665082fb3b0de256a5608d65e0931df6 252 Gene3D G3DSA:3.40.190.10 106 212 4.6E-79 T 11-10-2018 Tbd_0976 f9217c850ed10588a3797822dd0eee98 169 Gene3D G3DSA:3.30.1050.10 23 160 1.0E-22 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Tbd_0976 f9217c850ed10588a3797822dd0eee98 169 Pfam PF02036 SCP-2 sterol transfer family 47 150 3.6E-14 T 11-10-2018 IPR003033 SCP2 sterol-binding domain Tbd_0976 f9217c850ed10588a3797822dd0eee98 169 SUPERFAMILY SSF55718 20 164 2.14E-29 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 95 6.7E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 Gene3D G3DSA:1.10.760.10 8 100 2.9E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 SUPERFAMILY SSF46626 9 99 4.73E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 Pfam PF02239 Cytochrome D1 heme domain 132 508 4.1E-111 T 11-10-2018 Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 SUPERFAMILY SSF51004 104 510 2.22E-83 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Tbd_0070 f7a861dd322d853a9e3e989936e3ab03 517 Gene3D G3DSA:2.140.10.20 104 511 4.5E-122 T 11-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 Gene3D G3DSA:2.40.50.100 72 211 6.4E-52 T 11-10-2018 Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 Gene3D G3DSA:1.10.287.470 106 175 6.4E-52 T 11-10-2018 Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 352 8.7E-38 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 SUPERFAMILY SSF111369 80 283 2.22E-13 T 11-10-2018 Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 Gene3D G3DSA:2.40.30.170 58 286 6.4E-52 T 11-10-2018 Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 277 3.0E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_0142 76ea85ebe670beb143f4b006d61908b5 357 Gene3D G3DSA:2.40.420.20 46 342 6.4E-52 T 11-10-2018 Tbd_2133 cbb3ed56784ec0346864d12b7e022158 279 Pfam PF00445 Ribonuclease T2 family 62 179 9.3E-11 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Tbd_2133 cbb3ed56784ec0346864d12b7e022158 279 Gene3D G3DSA:3.90.730.10 48 274 6.5E-44 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Tbd_2133 cbb3ed56784ec0346864d12b7e022158 279 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 11-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 Tbd_2133 cbb3ed56784ec0346864d12b7e022158 279 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 95 102 - T 11-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Tbd_2133 cbb3ed56784ec0346864d12b7e022158 279 SUPERFAMILY SSF55895 35 244 8.37E-25 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 PRINTS PR01249 Ribosomal protein L31 signature 47 65 2.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 PRINTS PR01249 Ribosomal protein L31 signature 32 47 2.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 SUPERFAMILY SSF143800 1 67 1.92E-28 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.16 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 Pfam PF01197 Ribosomal protein L31 1 66 8.3E-35 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 Gene3D G3DSA:2.30.170.50 1 68 3.9E-34 T 11-10-2018 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 5.1E-36 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0039 88add6de298ecf79ee136f6784828a9b 68 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 Gene3D G3DSA:3.40.1380.20 334 467 5.2E-167 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 SUPERFAMILY SSF50800 71 164 2.09E-26 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 SUPERFAMILY SSF51621 2 336 3.84E-96 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 242 266 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 292 310 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 215 241 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 311 327 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 185 199 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 60 76 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 PRINTS PR01050 Pyruvate kinase family signature 267 291 2.0E-60 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 Gene3D G3DSA:2.40.33.10 71 167 5.2E-167 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 2.3E-162 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 469 8.1E-30 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 Gene3D G3DSA:3.20.20.60 3 333 5.2E-167 T 11-10-2018 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 Pfam PF00224 Pyruvate kinase, barrel domain 2 338 1.3E-121 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0162 24b79adfb20e578c5579e4a74acc89a5 477 SUPERFAMILY SSF52935 321 472 1.44E-38 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 100 5.9E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 Pfam PF00034 Cytochrome c 121 206 7.6E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 SUPERFAMILY SSF46626 15 104 8.72E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 PIRSF PIRSF000005 3 208 6.6E-64 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 Gene3D G3DSA:1.10.760.10 24 104 4.2E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 Gene3D G3DSA:1.10.760.10 112 206 4.1E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0129 b0ea39fbb63433d2ff8324418a8a625b 213 SUPERFAMILY SSF46626 114 206 5.87E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0140 96094044efc58a5de717297c055b9c0a 633 Pfam PF00884 Sulfatase 266 533 1.0E-36 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Tbd_0140 96094044efc58a5de717297c055b9c0a 633 Gene3D G3DSA:3.40.720.10 263 549 1.0E-67 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tbd_0140 96094044efc58a5de717297c055b9c0a 633 Gene3D G3DSA:3.30.1120.80 550 586 1.0E-67 T 11-10-2018 Tbd_0140 96094044efc58a5de717297c055b9c0a 633 SUPERFAMILY SSF53649 263 590 1.08E-57 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_0028 fc1e917d8603dbc661f3907f95c13173 280 Pfam PF05673 Protein of unknown function (DUF815) 32 279 1.4E-97 T 11-10-2018 IPR008533 Domain of unknown function DUF815 Tbd_0028 fc1e917d8603dbc661f3907f95c13173 280 SUPERFAMILY SSF52540 54 190 1.21E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0028 fc1e917d8603dbc661f3907f95c13173 280 Gene3D G3DSA:3.40.50.300 50 193 9.8E-14 T 11-10-2018 Tbd_0028 fc1e917d8603dbc661f3907f95c13173 280 SMART SM00382 80 208 0.0024 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 SUPERFAMILY SSF53271 76 317 6.39E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 126 8.7E-36 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 Pfam PF14572 Phosphoribosyl synthetase-associated domain 217 324 1.4E-23 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 325 1.3E-82 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 Gene3D G3DSA:3.40.50.2020 9 314 8.1E-99 T 11-10-2018 Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 SMART SM01400 6 126 2.7E-57 T 11-10-2018 Tbd_1465 5f5040642833f296d7164ab76d2a6e84 327 Gene3D G3DSA:3.40.50.2020 154 302 8.1E-99 T 11-10-2018 Tbd_1885 1a46079ce2db9b992761893c5d15c524 363 SUPERFAMILY SSF56796 8 336 3.14E-62 T 11-10-2018 Tbd_1885 1a46079ce2db9b992761893c5d15c524 363 Gene3D G3DSA:1.20.1090.10 160 351 1.7E-32 T 11-10-2018 Tbd_1885 1a46079ce2db9b992761893c5d15c524 363 Gene3D G3DSA:3.40.50.1970 4 157 5.2E-39 T 11-10-2018 Tbd_1885 1a46079ce2db9b992761893c5d15c524 363 PIRSF PIRSF001455 27 352 3.7E-83 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_1885 1a46079ce2db9b992761893c5d15c524 363 Pfam PF01761 3-dehydroquinate synthase 53 315 2.2E-62 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 SMART SM00861 355 525 2.4E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.2E-45 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Gene3D G3DSA:3.40.50.920 539 661 4.6E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 SUPERFAMILY SSF52518 6 330 4.02E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 334 2.6E-165 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Gene3D G3DSA:3.40.50.970 327 537 1.5E-84 T 11-10-2018 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Pfam PF02780 Transketolase, C-terminal domain 540 653 7.0E-21 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 SUPERFAMILY SSF52922 534 661 5.37E-47 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 SUPERFAMILY SSF52518 331 525 5.89E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 Gene3D G3DSA:3.40.50.970 3 326 1.4E-136 T 11-10-2018 Tbd_0159 80267ccf5383aa0823bac529e3d8c2e3 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 660 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Tbd_0439 b3a9d529b3175f56667d5999f75fc6ee 670 SUPERFAMILY SSF56935 37 655 9.89E-89 T 11-10-2018 Tbd_0439 b3a9d529b3175f56667d5999f75fc6ee 670 Gene3D G3DSA:2.170.130.10 33 162 9.1E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_0439 b3a9d529b3175f56667d5999f75fc6ee 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 155 3.6E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_0439 b3a9d529b3175f56667d5999f75fc6ee 670 Pfam PF00593 TonB dependent receptor 228 663 9.7E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_0439 b3a9d529b3175f56667d5999f75fc6ee 670 Gene3D G3DSA:2.40.170.20 169 670 2.7E-50 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_1513 d35646205350a7bc2f2964aa7c925859 340 SUPERFAMILY SSF51569 4 338 3.45E-132 T 11-10-2018 Tbd_1513 d35646205350a7bc2f2964aa7c925859 340 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 212 222 - T 11-10-2018 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1513 d35646205350a7bc2f2964aa7c925859 340 Pfam PF00274 Fructose-bisphosphate aldolase class-I 5 337 8.6E-138 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1513 d35646205350a7bc2f2964aa7c925859 340 Gene3D G3DSA:3.20.20.70 1 340 2.1E-151 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0492 740e258ac369d25e06d803bd0a3bff75 110 Pfam PF03334 Na+/H+ antiporter subunit 9 88 1.5E-27 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tbd_0492 740e258ac369d25e06d803bd0a3bff75 110 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 9 91 5.0E-27 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Tbd_1257 db57212b0566aef5813228ab06c60f08 221 SUPERFAMILY SSF46785 88 164 2.43E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1257 db57212b0566aef5813228ab06c60f08 221 Gene3D G3DSA:1.10.10.10 86 182 7.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1257 db57212b0566aef5813228ab06c60f08 221 Pfam PF04079 Segregation and condensation complex subunit ScpB 16 173 3.3E-49 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tbd_1257 db57212b0566aef5813228ab06c60f08 221 Gene3D G3DSA:1.10.10.10 6 85 2.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1257 db57212b0566aef5813228ab06c60f08 221 PIRSF PIRSF019345 1 203 1.7E-57 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tbd_1257 db57212b0566aef5813228ab06c60f08 221 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 12 175 4.8E-32 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tbd_1257 db57212b0566aef5813228ab06c60f08 221 SUPERFAMILY SSF46785 8 85 1.39E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0323 d130537a4d48321526a337cfd128850d 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 174 6.6E-46 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Tbd_0323 d130537a4d48321526a337cfd128850d 227 Pfam PF13500 AAA domain 4 204 2.8E-38 T 11-10-2018 Tbd_0323 d130537a4d48321526a337cfd128850d 227 SUPERFAMILY SSF52540 1 207 4.25E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0323 d130537a4d48321526a337cfd128850d 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 207 27.349 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Tbd_0323 d130537a4d48321526a337cfd128850d 227 Gene3D G3DSA:3.40.50.300 4 218 9.4E-63 T 11-10-2018 Tbd_0323 d130537a4d48321526a337cfd128850d 227 PIRSF PIRSF006755 2 213 9.1E-66 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 SMART SM00448 3 122 1.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 Gene3D G3DSA:3.40.50.2300 1 132 1.2E-32 T 11-10-2018 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 Pfam PF01339 CheB methylesterase 164 341 3.3E-60 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 Gene3D G3DSA:3.40.50.180 153 352 9.5E-77 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 SUPERFAMILY SSF52738 160 347 3.27E-73 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 347 41.492 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 SUPERFAMILY SSF52172 1 107 1.57E-29 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 PIRSF PIRSF000876 1 351 4.0E-140 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tbd_1615 7b311fd707b5098f4b57ba57ad5339e1 356 Pfam PF00072 Response regulator receiver domain 5 107 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 SUPERFAMILY SSF53901 214 409 6.37E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 Gene3D G3DSA:3.40.47.10 1 255 1.7E-94 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 408 6.5E-194 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 Gene3D G3DSA:3.40.47.10 257 399 3.4E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 SMART SM00825 Beta-ketoacyl synthase 6 410 1.8E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.4E-61 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 PIRSF PIRSF000447 1 410 1.5E-181 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 1.4E-33 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Tbd_1547 d5ffd87a10988ef52432549b1e85741f 410 SUPERFAMILY SSF53901 3 252 5.76E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 Gene3D G3DSA:3.40.50.300 59 276 8.9E-40 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 168 192 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 77 105 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 207 235 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 242 268 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 316 339 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 PRINTS PR01874 DNA repair protein radA signature 118 135 1.2E-95 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 445 2.5E-194 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 SMART SM00382 85 238 4.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 SUPERFAMILY SSF52540 63 287 7.19E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 Hamap MF_01498 DNA repair protein RadA [radA]. 21 449 43.861 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 Pfam PF13541 Subunit ChlI of Mg-chelatase 344 424 2.0E-7 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 Pfam PF13481 AAA domain 63 216 3.7E-14 T 11-10-2018 Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 Gene3D G3DSA:3.30.230.10 321 449 5.2E-19 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0965 d8fe9e5ea582c9bb4bf9357792834b65 450 SUPERFAMILY SSF54211 249 449 1.37E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 SMART SM00257 409 452 5.4E-8 T 11-10-2018 IPR018392 LysM domain Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 SMART SM00257 342 387 3.4 T 11-10-2018 IPR018392 LysM domain Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 Pfam PF01464 Transglycosylase SLT domain 124 222 2.0E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 Gene3D G3DSA:3.10.350.10 343 405 1.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 SUPERFAMILY SSF53955 114 266 4.95E-39 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 SUPERFAMILY SSF54106 408 451 8.37E-9 T 11-10-2018 Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 Gene3D G3DSA:3.10.350.10 406 451 1.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 Pfam PF01476 LysM domain 410 450 5.0E-9 T 11-10-2018 IPR018392 LysM domain Tbd_1666 c1f95fa3951c66298fc793b4575931eb 501 Gene3D G3DSA:1.10.530.10 98 262 1.8E-28 T 11-10-2018 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 56.308 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 3.7E-91 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 361 1.5E-165 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 361 1.4E-157 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 Gene3D G3DSA:3.20.20.105 1 365 4.2E-168 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_2075 0133d7032f9f68f255e1a68ed4255ed1 367 SUPERFAMILY SSF51713 1 361 1.57E-160 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 379 33.382 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 Pfam PF13360 PQQ-like domain 76 307 3.0E-51 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SUPERFAMILY SSF50998 27 367 1.88E-62 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 143 174 6.3 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 102 134 2.9 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 276 308 40.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 239 270 240.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 318 349 13.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 SMART SM00564 187 219 0.011 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 4 378 1.2E-127 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB Tbd_0597 9d140e7b27be3a20cf7273ffdb40da11 380 Gene3D G3DSA:2.130.10.10 27 380 5.9E-81 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 Gene3D G3DSA:3.10.290.10 14 78 1.5E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 311 1.4E-96 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 SUPERFAMILY SSF55174 24 76 3.24E-6 T 11-10-2018 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 Pfam PF00849 RNA pseudouridylate synthase 100 249 9.1E-35 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 SUPERFAMILY SSF55120 85 313 3.91E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 Gene3D G3DSA:3.30.2350.10 92 314 9.9E-77 T 11-10-2018 Tbd_0810 796ca31c4478ba4caf6fc84897bbaed8 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 SUPERFAMILY SSF56770 48 308 1.57E-87 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 231 249 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 93 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 187 210 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 158 182 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 213 230 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 115 138 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 283 296 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 46 68 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 281 9.2E-83 T 11-10-2018 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 Gene3D G3DSA:3.40.50.700 46 225 1.6E-68 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 61 206 5.5E-31 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 Gene3D G3DSA:4.10.480.10 228 339 7.1E-41 T 11-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 5 315 3.5E-131 T 11-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 PIRSF PIRSF000310 5 354 3.4E-137 T 11-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 226 307 7.3E-33 T 11-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Tbd_1378 3bd7bcb9ca6bb746cbe6312576bdb325 360 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 42 5.3E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Tbd_0833 d6cf7df2e58b12ca4827fab24812174f 585 Pfam PF17243 POTRA domain TamA domain 1 38 110 9.4E-8 T 11-10-2018 IPR035243 TamA, POTRA domain 1 Tbd_0833 d6cf7df2e58b12ca4827fab24812174f 585 Pfam PF01103 Surface antigen 315 585 1.9E-25 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Tbd_0833 d6cf7df2e58b12ca4827fab24812174f 585 Gene3D G3DSA:2.40.160.50 280 584 2.5E-72 T 11-10-2018 Tbd_0833 d6cf7df2e58b12ca4827fab24812174f 585 Gene3D G3DSA:3.10.20.310 203 279 6.4E-12 T 11-10-2018 Tbd_0011 c273afa79244bc8e280585997ec32575 148 Pfam PF04361 Protein of unknown function (DUF494) 1 148 3.2E-40 T 11-10-2018 IPR007456 Smg Tbd_0011 c273afa79244bc8e280585997ec32575 148 Hamap MF_00598 Protein Smg [smg]. 1 148 20.307 T 11-10-2018 IPR007456 Smg Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 SUPERFAMILY SSF52833 5 113 2.84E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Gene3D G3DSA:3.40.30.10 6 116 2.0E-22 T 11-10-2018 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Pfam PF00085 Thioredoxin 8 109 5.3E-16 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Gene3D G3DSA:1.25.40.10 200 287 3.9E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 SUPERFAMILY SSF48452 120 249 1.21E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Pfam PF14559 Tetratricopeptide repeat 127 192 9.1E-11 T 11-10-2018 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Gene3D G3DSA:1.25.40.10 117 199 1.9E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0886 cc5c754aa910b045e59b14419e76ab41 287 Pfam PF14561 Tetratricopeptide repeat 199 287 1.0E-21 T 11-10-2018 Tbd_0505 6440f9ce6f7e11fbdda1bbc9c6726e16 210 Pfam PF07589 PEP-CTERM motif 184 208 3.6E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1553 846e4b6fbc63a4a42bbb6b85c5712216 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.695 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1553 846e4b6fbc63a4a42bbb6b85c5712216 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.5E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1553 846e4b6fbc63a4a42bbb6b85c5712216 59 SUPERFAMILY SSF57829 2 55 1.65E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tbd_1553 846e4b6fbc63a4a42bbb6b85c5712216 59 Pfam PF01783 Ribosomal L32p protein family 2 55 3.4E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.319 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 Pfam PF00203 Ribosomal protein S19 3 83 3.4E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 Gene3D G3DSA:3.30.860.10 1 91 4.1E-40 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 PIRSF PIRSF002144 1 91 2.4E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 6.5E-45 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.5E-23 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.5E-23 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.5E-23 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0409 ecc998204308c93dea9c361c1a983d21 91 SUPERFAMILY SSF54570 3 83 2.75E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_2439 601a6bdf2bb4da4012b0b82e25fbcd58 173 SUPERFAMILY SSF75217 18 170 4.64E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_2439 601a6bdf2bb4da4012b0b82e25fbcd58 173 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 18 172 27.014 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tbd_2439 601a6bdf2bb4da4012b0b82e25fbcd58 173 Pfam PF02590 Predicted SPOUT methyltransferase 18 171 1.2E-44 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tbd_2439 601a6bdf2bb4da4012b0b82e25fbcd58 173 PIRSF PIRSF004505 18 172 1.2E-40 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tbd_2439 601a6bdf2bb4da4012b0b82e25fbcd58 173 Gene3D G3DSA:3.40.1280.10 18 173 2.3E-46 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 SMART SM00363 99 163 4.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 Pfam PF01479 S4 domain 100 146 2.6E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 34.584 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 SUPERFAMILY SSF55174 2 209 9.29E-69 T 11-10-2018 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 SMART SM01390 3 98 7.4E-51 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 Gene3D G3DSA:3.10.290.10 98 194 2.7E-85 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 Gene3D G3DSA:1.10.1050.10 6 209 2.7E-85 T 11-10-2018 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 4.5E-29 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tbd_0429 5214b4a5e93524ac1bc9e8399bcd019d 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 209 8.0E-72 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 SUPERFAMILY SSF52821 2 146 1.27E-40 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 SUPERFAMILY SSF52821 159 281 9.69E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 Pfam PF00581 Rhodanese-like domain 8 129 1.5E-17 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 Pfam PF00581 Rhodanese-like domain 158 271 4.1E-8 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 Gene3D G3DSA:3.40.250.10 161 281 1.9E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 Gene3D G3DSA:3.40.250.10 2 150 9.8E-46 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 SMART SM00450 156 276 3.0E-7 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 SMART SM00450 7 133 9.0E-22 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2489 ea4e55c271fc4e64d8c74ad8302fda41 282 ProSitePatterns PS00380 Rhodanese signature 1. 40 51 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Tbd_1848 d9032b4a84a4ec1693884e2674ae2562 104 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 104 29.036 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Tbd_1848 d9032b4a84a4ec1693884e2674ae2562 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 103 2.8E-39 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Tbd_1848 d9032b4a84a4ec1693884e2674ae2562 104 SUPERFAMILY SSF51182 11 103 9.33E-35 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_1848 d9032b4a84a4ec1693884e2674ae2562 104 Gene3D G3DSA:2.60.120.10 1 104 7.4E-45 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1362 8ca732de0824d09b7a390a68d1eb1c3b 139 Pfam PF08359 YsiA-like protein, C-terminal region 7 115 2.4E-4 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Tbd_1362 8ca732de0824d09b7a390a68d1eb1c3b 139 SUPERFAMILY SSF48498 21 136 2.2E-25 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_1362 8ca732de0824d09b7a390a68d1eb1c3b 139 Gene3D G3DSA:1.10.357.10 1 138 1.0E-23 T 11-10-2018 Tbd_1147 020b87b3004c2508113520bfab423c08 426 SMART SM00928 333 378 6.8E-26 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 52 223 1.0E-45 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Gene3D G3DSA:1.20.1440.230 331 425 8.4E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Gene3D G3DSA:3.40.50.11540 57 234 3.3E-76 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 346 357 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Pfam PF10531 SLBB domain 247 295 6.7E-16 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Gene3D G3DSA:3.10.20.600 236 330 1.9E-36 T 11-10-2018 Tbd_1147 020b87b3004c2508113520bfab423c08 426 SUPERFAMILY SSF142984 245 328 1.83E-27 T 11-10-2018 Tbd_1147 020b87b3004c2508113520bfab423c08 426 SUPERFAMILY SSF142019 5 243 4.05E-82 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 SUPERFAMILY SSF140490 329 425 1.7E-38 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 336 418 5.7E-31 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1147 020b87b3004c2508113520bfab423c08 426 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 16 419 2.2E-193 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1523 3ea54ebc71e420e27b778d7d5f7cf7de 141 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_1523 3ea54ebc71e420e27b778d7d5f7cf7de 141 SUPERFAMILY SSF110916 16 100 8.24E-15 T 11-10-2018 Tbd_1523 3ea54ebc71e420e27b778d7d5f7cf7de 141 Pfam PF00472 RF-1 domain 6 133 1.1E-25 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tbd_1523 3ea54ebc71e420e27b778d7d5f7cf7de 141 Gene3D G3DSA:3.30.160.20 1 139 1.2E-42 T 11-10-2018 Tbd_2435 356ab40445a0707c165e13354d6a6254 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 2.8E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tbd_2435 356ab40445a0707c165e13354d6a6254 255 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 6.2E-83 T 11-10-2018 Tbd_2435 356ab40445a0707c165e13354d6a6254 255 Gene3D G3DSA:3.60.10.10 1 254 3.1E-76 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_2435 356ab40445a0707c165e13354d6a6254 255 SUPERFAMILY SSF56219 1 253 6.94E-82 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_2435 356ab40445a0707c165e13354d6a6254 255 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Tbd_2435 356ab40445a0707c165e13354d6a6254 255 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 6.4E-81 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 Gene3D G3DSA:1.10.155.10 8 85 1.5E-26 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 SMART SM00138 19 279 2.5E-95 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 SUPERFAMILY SSF53335 87 276 1.57E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 219 233 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 147 163 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 238 261 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 113 133 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.8E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 272 1.7E-55 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 Gene3D G3DSA:3.40.50.150 86 279 4.0E-65 T 11-10-2018 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 3.2E-18 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 SUPERFAMILY SSF47757 12 86 1.44E-22 T 11-10-2018 Tbd_1617 b9737e38caf3564c6b1cded394a04d76 289 PIRSF PIRSF000410 1 280 8.4E-94 T 11-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Tbd_1497 993b481090e6906232a7996b4b7f5887 202 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 30 192 7.2E-50 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Tbd_1497 993b481090e6906232a7996b4b7f5887 202 Gene3D G3DSA:2.50.20.10 17 201 2.5E-57 T 11-10-2018 Tbd_1497 993b481090e6906232a7996b4b7f5887 202 SUPERFAMILY SSF89392 21 201 7.85E-52 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Tbd_1497 993b481090e6906232a7996b4b7f5887 202 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 199 1.7E-22 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Tbd_1497 993b481090e6906232a7996b4b7f5887 202 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 202 31.257 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 185 278 1.7E-20 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 TIGRFAM TIGR03109 exosortase_1: exosortase A 15 280 3.4E-112 T 11-10-2018 IPR017540 Exosortase 1 Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 28 278 1.5E-64 T 11-10-2018 IPR019127 Exosortase Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 337 509 2.2E-45 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 Pfam PF11984 Protein of unknown function (DUF3485) 310 507 1.7E-39 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Tbd_0290 65ed36c7cfc8357a4a4f768240997294 515 TIGRFAM TIGR02602 8TM_EpsH: exosortase 43 279 8.9E-82 T 11-10-2018 IPR013426 Exosortase, EpsH-like Tbd_1190 e4f625085d416e8d060377ea62bdf943 281 Pfam PF00005 ABC transporter 33 182 8.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1190 e4f625085d416e8d060377ea62bdf943 281 SMART SM00382 42 248 3.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1190 e4f625085d416e8d060377ea62bdf943 281 SUPERFAMILY SSF52540 17 245 1.33E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1190 e4f625085d416e8d060377ea62bdf943 281 Gene3D G3DSA:3.40.50.300 14 269 2.5E-61 T 11-10-2018 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 SUPERFAMILY SSF48452 187 350 1.26E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 Gene3D G3DSA:1.25.40.10 173 260 5.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 Gene3D G3DSA:1.25.40.10 261 358 1.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 SMART SM00028 186 219 40.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 SMART SM00028 220 253 20.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 SMART SM00028 288 321 4.6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0766 b9bd922f898bf57aaea35d1bd8261e49 369 Pfam PF14559 Tetratricopeptide repeat 231 297 2.3E-8 T 11-10-2018 Tbd_1059 bd826326915f875029c22a541494f4db 282 Gene3D G3DSA:3.40.50.150 8 281 2.2E-67 T 11-10-2018 Tbd_1059 bd826326915f875029c22a541494f4db 282 SUPERFAMILY SSF53335 11 256 9.24E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1059 bd826326915f875029c22a541494f4db 282 Pfam PF13649 Methyltransferase domain 97 182 4.1E-10 T 11-10-2018 Tbd_1059 bd826326915f875029c22a541494f4db 282 PIRSF PIRSF018249 3 280 1.5E-75 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 SUPERFAMILY SSF46894 124 226 6.8E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 1.4E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 SUPERFAMILY SSF52172 2 126 1.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 Gene3D G3DSA:1.10.10.10 124 230 3.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 SMART SM00448 4 114 2.6E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 Gene3D G3DSA:3.40.50.2300 1 123 9.0E-35 T 11-10-2018 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 Pfam PF00072 Response regulator receiver domain 6 114 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1287 250488fe13ed940ce49d5650eb6dfafa 232 SMART SM00862 148 224 8.0E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2051 de29776c717cbea5d3cc46b84dd5c131 168 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tbd_2051 de29776c717cbea5d3cc46b84dd5c131 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 133 9.3E-45 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tbd_2051 de29776c717cbea5d3cc46b84dd5c131 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 133 3.4E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tbd_2051 de29776c717cbea5d3cc46b84dd5c131 168 Gene3D G3DSA:3.30.70.560 3 159 1.5E-53 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tbd_2051 de29776c717cbea5d3cc46b84dd5c131 168 SUPERFAMILY SSF55083 4 145 2.35E-51 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tbd_0702 26dfbdf26f8fa6ab65b88bd0b50708fb 61 Pfam PF01361 Tautomerase enzyme 2 59 1.2E-16 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 Tbd_0702 26dfbdf26f8fa6ab65b88bd0b50708fb 61 Gene3D G3DSA:3.30.429.10 1 61 5.2E-19 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily Tbd_0702 26dfbdf26f8fa6ab65b88bd0b50708fb 61 SUPERFAMILY SSF55331 2 60 3.52E-18 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Gene3D G3DSA:3.40.50.300 148 342 4.1E-72 T 11-10-2018 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 760 2.3E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 3.4E-10 T 11-10-2018 IPR004176 Clp, N-terminal Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.0E-12 T 11-10-2018 IPR004176 Clp, N-terminal Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 4.5E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 1.1E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Gene3D G3DSA:1.10.1780.10 1 147 8.4E-35 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SUPERFAMILY SSF52540 547 853 2.08E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Gene3D G3DSA:3.40.50.300 551 764 7.6E-88 T 11-10-2018 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SMART SM00382 598 767 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SMART SM00382 198 343 8.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Gene3D G3DSA:3.40.50.300 343 545 5.4E-69 T 11-10-2018 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SUPERFAMILY SSF81923 4 156 3.83E-40 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 4.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 4.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 4.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 4.1E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SMART SM01086 766 855 5.4E-39 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 Gene3D G3DSA:1.10.8.60 766 859 9.1E-28 T 11-10-2018 Tbd_0815 5a602fa4ffc34a7e5f4a787c1c4fe51a 859 SUPERFAMILY SSF52540 160 546 3.72E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 84 1.6E-32 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 Pfam PF00462 Glutaredoxin 4 65 1.8E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 SUPERFAMILY SSF52833 1 85 1.47E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 Gene3D G3DSA:3.40.30.10 1 85 1.3E-24 T 11-10-2018 Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 PRINTS PR00160 Glutaredoxin signature 4 22 4.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 PRINTS PR00160 Glutaredoxin signature 48 61 4.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_2400 c9660582cd215a569ac75f6f9f6ed3e8 87 PRINTS PR00160 Glutaredoxin signature 62 75 4.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 Gene3D G3DSA:1.10.10.410 414 475 3.6E-27 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.425 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 SMART SM00845 327 474 1.7E-81 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 Gene3D G3DSA:1.10.150.380 296 413 8.3E-35 T 11-10-2018 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 SUPERFAMILY SSF89095 296 400 1.31E-33 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 SUPERFAMILY SSF55931 4 295 5.69E-117 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 Pfam PF02934 GatB/GatE catalytic domain 5 288 8.4E-108 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 Pfam PF02637 GatB domain 328 474 3.6E-53 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tbd_0257 ea57f009f4301d7d80c7ce1531206155 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 474 1.8E-169 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 Pfam PF03471 Transporter associated domain 497 570 3.0E-11 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 Pfam PF00999 Sodium/hydrogen exchanger family 13 386 4.4E-52 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 Gene3D G3DSA:3.30.70.1450 406 484 2.5E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 Gene3D G3DSA:3.30.465.10 499 571 5.5E-6 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 SUPERFAMILY SSF116726 410 482 1.83E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 SUPERFAMILY SSF56176 498 570 3.27E-6 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 Gene3D G3DSA:1.20.1530.20 5 390 1.1E-20 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_0500 c8c885fb5b4cbb1474d65e982445e48a 578 SMART SM01091 493 572 7.3E-13 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_0107 6ed68b2037ad637be417d54f05dc5519 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 36.899 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Tbd_0107 6ed68b2037ad637be417d54f05dc5519 197 Pfam PF13580 SIS domain 10 146 1.1E-37 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tbd_0107 6ed68b2037ad637be417d54f05dc5519 197 SUPERFAMILY SSF53697 4 190 1.17E-57 T 11-10-2018 Tbd_0107 6ed68b2037ad637be417d54f05dc5519 197 Gene3D G3DSA:3.40.50.10490 1 195 4.4E-76 T 11-10-2018 Tbd_0102 a4f3b92d840d409bc1c7ef355c827d47 178 Pfam PF05433 Glycine zipper 2TM domain 71 112 6.0E-11 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 SUPERFAMILY SSF52833 647 744 3.96E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 ProSitePatterns PS00194 Thioredoxin family active site. 659 677 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Gene3D G3DSA:3.40.30.10 626 749 1.6E-29 T 11-10-2018 Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Pfam PF11412 Disulphide bond corrector protein DsbC 176 294 4.9E-27 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Pfam PF11412 Disulphide bond corrector protein DsbC 27 140 4.2E-32 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Gene3D G3DSA:2.60.40.1250 167 309 1.8E-30 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Gene3D G3DSA:2.60.40.1250 19 157 9.9E-41 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 335 541 9.1E-23 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 SUPERFAMILY SSF74863 25 140 2.35E-34 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Pfam PF13899 Thioredoxin-like 643 702 1.4E-14 T 11-10-2018 Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 SUPERFAMILY SSF74863 175 295 1.7E-26 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2559 3581d9f369b27b3f076da1d6defa1af6 752 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 4 750 34.529 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 Gene3D G3DSA:3.40.50.150 27 244 1.1E-68 T 11-10-2018 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 SUPERFAMILY SSF53335 11 241 2.09E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 152 166 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 243 1.3E-74 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 243 36.182 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Tbd_0215 6478f8c6b249db1d7aaf55b931f93dd9 244 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 243 1.8E-85 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 PIRSF PIRSF001413 1 399 5.9E-167 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 52.579 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 SUPERFAMILY SSF53686 7 393 2.36E-150 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 382 2.0E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 Gene3D G3DSA:3.40.50.1100 14 210 9.6E-186 T 11-10-2018 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 394 4.3E-192 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1914 89cd1d1498e823965bfd226f19e8249b 399 Gene3D G3DSA:3.40.50.1100 58 388 9.6E-186 T 11-10-2018 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Pfam PF01043 SecA preprotein cross-linking domain 249 370 6.6E-37 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Gene3D G3DSA:3.40.50.300 40 427 4.3E-175 T 11-10-2018 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Gene3D G3DSA:3.40.50.300 429 639 5.9E-86 T 11-10-2018 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SMART SM00957 23 414 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 118 132 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 388 405 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 134 144 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 80 104 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 187 207 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 351 373 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 PRINTS PR00906 SecA protein signature 425 438 1.9E-72 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SUPERFAMILY SSF81886 639 911 1.83E-82 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SUPERFAMILY SSF52540 428 637 2.6E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SMART SM00958 245 370 6.0E-78 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Pfam PF07517 SecA DEAD-like domain 24 414 2.4E-130 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Gene3D G3DSA:1.10.3060.10 640 852 9.2E-77 T 11-10-2018 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Hamap MF_01382 Protein translocase subunit SecA [secA]. 22 851 19.907 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 ProSitePatterns PS01312 SecA family signature. 512 527 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 45 837 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SUPERFAMILY SSF81767 244 380 1.26E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 SUPERFAMILY SSF52540 22 427 1.56E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Pfam PF07516 SecA Wing and Scaffold domain 636 847 2.6E-68 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Pfam PF02810 SEC-C motif 903 921 1.8E-10 T 11-10-2018 IPR004027 SEC-C motif Tbd_0131 5f4a23ae0b69803b5d6f9aa438494280 923 Gene3D G3DSA:3.90.1440.10 246 380 4.3E-175 T 11-10-2018 Tbd_0284 4d38281429e4e7f18f0e66ae54c14008 511 Pfam PF10082 Putative beta-barrel porin 2 387 510 7.9E-9 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 Tbd_0284 4d38281429e4e7f18f0e66ae54c14008 511 SUPERFAMILY SSF56935 380 511 3.11E-6 T 11-10-2018 Tbd_0284 4d38281429e4e7f18f0e66ae54c14008 511 TIGRFAM TIGR03016 pepcterm_hypo_1: uncharacterized protein, PEP-CTERM system associated 43 511 1.3E-161 T 11-10-2018 IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM Tbd_0284 4d38281429e4e7f18f0e66ae54c14008 511 Gene3D G3DSA:2.40.160.10 370 474 1.5E-5 T 11-10-2018 IPR023614 Porin domain superfamily Tbd_0153 372e5d83a07e8a6a166f40bc27cf392a 282 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 262 3.4E-37 T 11-10-2018 Tbd_0153 372e5d83a07e8a6a166f40bc27cf392a 282 Gene3D G3DSA:3.40.190.10 21 131 1.3E-12 T 11-10-2018 Tbd_0153 372e5d83a07e8a6a166f40bc27cf392a 282 Gene3D G3DSA:3.40.190.10 133 259 6.7E-8 T 11-10-2018 Tbd_0153 372e5d83a07e8a6a166f40bc27cf392a 282 SUPERFAMILY SSF53850 29 191 1.95E-14 T 11-10-2018 Tbd_2005 c13130c226a907f611d8ded170ad8956 425 Pfam PF00589 Phage integrase family 244 392 1.8E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2005 c13130c226a907f611d8ded170ad8956 425 SUPERFAMILY SSF56349 114 403 5.0E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2005 c13130c226a907f611d8ded170ad8956 425 Gene3D G3DSA:3.30.160.390 17 103 7.1E-32 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Tbd_2005 c13130c226a907f611d8ded170ad8956 425 Gene3D G3DSA:1.10.443.10 229 410 1.7E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2005 c13130c226a907f611d8ded170ad8956 425 Pfam PF13356 Arm DNA-binding domain 19 102 6.2E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Tbd_2005 c13130c226a907f611d8ded170ad8956 425 Gene3D G3DSA:1.10.150.130 105 221 3.9E-32 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 49 69 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 Gene3D G3DSA:3.30.700.10 75 179 4.6E-38 T 11-10-2018 Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 49 179 2.1E-54 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 Pfam PF08334 Type II secretion system (T2SS), protein G 74 179 1.9E-44 T 11-10-2018 IPR013545 Type II secretion system protein G Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 47 68 3.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 75 2.9E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 PRINTS PR00813 Bacterial general secretion pathway protein G signature 86 104 2.9E-16 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1293 4bc1490ec222c09f6a04ca175e3c2bb8 179 SUPERFAMILY SSF54523 77 179 3.45E-36 T 11-10-2018 Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 112 1.4E-33 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 2.0E-46 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 Pfam PF02033 Ribosome-binding factor A 7 110 1.5E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 SUPERFAMILY SSF89919 2 112 1.01E-34 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 Gene3D G3DSA:3.30.300.20 1 105 1.4E-37 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Tbd_0696 c35ee21f3fd1011f8cf2112697b42bbb 124 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 110 25.951 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 32 5.4E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 2.2E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 2.2E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 7.2E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 Gene3D G3DSA:3.30.700.10 12 71 2.0E-13 T 11-10-2018 Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 SUPERFAMILY SSF54523 12 129 2.25E-22 T 11-10-2018 Tbd_1441 2518a58965207b5c0670d4836a6aad6d 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1105 d78d390e7442bdda4e6d3454e5cbc62a 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 131 1.6E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Tbd_1105 d78d390e7442bdda4e6d3454e5cbc62a 132 Pfam PF01641 SelR domain 11 130 1.2E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Tbd_1105 d78d390e7442bdda4e6d3454e5cbc62a 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 37.969 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Tbd_1105 d78d390e7442bdda4e6d3454e5cbc62a 132 Gene3D G3DSA:2.170.150.20 1 132 2.7E-63 T 11-10-2018 Tbd_1105 d78d390e7442bdda4e6d3454e5cbc62a 132 SUPERFAMILY SSF51316 7 132 5.18E-60 T 11-10-2018 IPR011057 Mss4-like superfamily Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 SUPERFAMILY SSF55620 8 197 1.48E-76 T 11-10-2018 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 18 196 6.0E-66 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 Gene3D G3DSA:3.30.1130.10 65 198 3.0E-54 T 11-10-2018 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 123 133 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 Pfam PF01227 GTP cyclohydrolase I 18 195 5.0E-75 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 13 196 39.341 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_0242 20ce9b3e78f889561d0d959cb30734e1 206 Gene3D G3DSA:1.10.286.10 5 61 6.6E-18 T 11-10-2018 Tbd_0285 06ba25f6b08448586618daab8aa7e69d 341 SUPERFAMILY SSF52540 6 265 2.84E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0285 06ba25f6b08448586618daab8aa7e69d 341 SMART SM00382 42 207 4.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0285 06ba25f6b08448586618daab8aa7e69d 341 Pfam PF13401 AAA domain 42 171 2.7E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0285 06ba25f6b08448586618daab8aa7e69d 341 Gene3D G3DSA:3.40.50.300 29 185 2.9E-14 T 11-10-2018 Tbd_0285 06ba25f6b08448586618daab8aa7e69d 341 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 269 9.3E-134 T 11-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 SUPERFAMILY SSF53697 243 609 5.38E-108 T 11-10-2018 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Gene3D G3DSA:3.40.50.10490 247 608 6.2E-141 T 11-10-2018 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Pfam PF13522 Glutamine amidotransferase domain 61 176 6.3E-23 T 11-10-2018 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Gene3D G3DSA:3.60.20.10 2 239 3.3E-78 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 SUPERFAMILY SSF56235 2 232 2.23E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 2.1E-250 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Pfam PF01380 SIS domain 292 410 3.5E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Pfam PF01380 SIS domain 462 590 1.6E-24 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.784 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tbd_2793 0c90f98fc2733d4cd45bde4d2eca1e43 609 Gene3D G3DSA:3.40.50.10490 446 594 6.2E-141 T 11-10-2018 Tbd_0742 a53cf473025191be097dbe5500e556db 393 Gene3D G3DSA:3.40.50.2000 181 354 9.2E-41 T 11-10-2018 Tbd_0742 a53cf473025191be097dbe5500e556db 393 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 332 6.5E-31 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tbd_0742 a53cf473025191be097dbe5500e556db 393 SUPERFAMILY SSF53756 9 353 2.62E-83 T 11-10-2018 Tbd_0742 a53cf473025191be097dbe5500e556db 393 Gene3D G3DSA:3.40.50.2000 4 173 2.2E-28 T 11-10-2018 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Gene3D G3DSA:3.30.9.10 349 570 4.5E-101 T 11-10-2018 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 SUPERFAMILY SSF51905 267 631 3.24E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 28 634 25.046 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Gene3D G3DSA:3.50.50.60 266 632 4.5E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 580 1.3E-84 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Pfam PF01266 FAD dependent oxidoreductase 267 610 1.2E-37 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Gene3D G3DSA:3.40.50.150 30 261 2.9E-89 T 11-10-2018 Tbd_1641 0229aae9204a97cd18922dc4c8f3e5e0 638 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 131 252 1.5E-36 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Tbd_0173 a82b89a9c289aa9ce06f72d5e72d47a0 483 Gene3D G3DSA:3.90.1150.10 336 466 5.2E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0173 a82b89a9c289aa9ce06f72d5e72d47a0 483 Pfam PF02347 Glycine cleavage system P-protein 27 363 2.2E-14 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Tbd_0173 a82b89a9c289aa9ce06f72d5e72d47a0 483 Gene3D G3DSA:3.40.640.10 77 335 3.1E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0173 a82b89a9c289aa9ce06f72d5e72d47a0 483 SUPERFAMILY SSF53383 4 479 7.6E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0173 a82b89a9c289aa9ce06f72d5e72d47a0 483 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 57.135 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Tbd_0962 f5d182fcef9a565bb67cc78ab8f9386e 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Tbd_0962 f5d182fcef9a565bb67cc78ab8f9386e 314 SUPERFAMILY SSF53613 9 305 5.77E-55 T 11-10-2018 IPR029056 Ribokinase-like Tbd_0962 f5d182fcef9a565bb67cc78ab8f9386e 314 Pfam PF00294 pfkB family carbohydrate kinase 8 298 2.0E-41 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Tbd_0962 f5d182fcef9a565bb67cc78ab8f9386e 314 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 306 2.8E-118 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Tbd_0962 f5d182fcef9a565bb67cc78ab8f9386e 314 Gene3D G3DSA:3.40.1190.20 1 305 1.8E-119 T 11-10-2018 IPR029056 Ribokinase-like Tbd_2760 d0813a47648699f5921532f44d64e7fe 276 Pfam PF01553 Acyltransferase 86 201 2.6E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_2760 d0813a47648699f5921532f44d64e7fe 276 SMART SM00563 96 204 1.1E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_2760 d0813a47648699f5921532f44d64e7fe 276 SUPERFAMILY SSF69593 11 255 1.09E-20 T 11-10-2018 Tbd_2665 53b7f79fea735d33540b13188ff30b8a 232 Pfam PF11306 Protein of unknown function (DUF3108) 12 226 1.6E-25 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 Tbd_2288 5c1b1ef1dbe866f10d81b45f0a3c442b 255 Pfam PF12706 Beta-lactamase superfamily domain 47 220 4.0E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_2288 5c1b1ef1dbe866f10d81b45f0a3c442b 255 SMART SM00849 35 220 1.1E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_2288 5c1b1ef1dbe866f10d81b45f0a3c442b 255 SUPERFAMILY SSF56281 1 249 5.24E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_2288 5c1b1ef1dbe866f10d81b45f0a3c442b 255 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 249 4.7E-126 T 11-10-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2288 5c1b1ef1dbe866f10d81b45f0a3c442b 255 Gene3D G3DSA:3.60.15.10 1 251 4.2E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0655 7de3068e416ba5d6023b3a7e7d5f19c7 333 Gene3D G3DSA:3.40.50.970 1 330 8.8E-118 T 11-10-2018 Tbd_0655 7de3068e416ba5d6023b3a7e7d5f19c7 333 Pfam PF00676 Dehydrogenase E1 component 12 309 6.2E-84 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Tbd_0655 7de3068e416ba5d6023b3a7e7d5f19c7 333 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 6 318 9.6E-125 T 11-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 Tbd_0655 7de3068e416ba5d6023b3a7e7d5f19c7 333 SUPERFAMILY SSF52518 4 321 1.9E-96 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_2629 26a8836272d93343173004c803bb2afb 333 SUPERFAMILY SSF52096 92 288 3.56E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_2629 26a8836272d93343173004c803bb2afb 333 Gene3D G3DSA:3.90.226.10 124 292 3.2E-40 T 11-10-2018 Tbd_2629 26a8836272d93343173004c803bb2afb 333 Pfam PF01343 Peptidase family S49 151 293 7.9E-42 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Tbd_2629 26a8836272d93343173004c803bb2afb 333 Pfam PF08496 Peptidase family S49 N-terminal 3 147 1.5E-40 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Tbd_2629 26a8836272d93343173004c803bb2afb 333 Gene3D G3DSA:3.40.1750.20 191 255 3.2E-40 T 11-10-2018 Tbd_0632 e9c89c5a8467109729395e63493557fd 763 SUPERFAMILY SSF82866 540 757 6.67E-32 T 11-10-2018 Tbd_0632 e9c89c5a8467109729395e63493557fd 763 SUPERFAMILY SSF82866 163 377 1.03E-18 T 11-10-2018 Tbd_0632 e9c89c5a8467109729395e63493557fd 763 Pfam PF03176 MMPL family 454 752 6.8E-15 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Tbd_0632 e9c89c5a8467109729395e63493557fd 763 Gene3D G3DSA:1.20.1640.10 582 762 7.1E-17 T 11-10-2018 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 3.0E-38 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 Gene3D G3DSA:2.60.15.10 1 131 4.0E-32 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 SUPERFAMILY SSF51344 3 87 2.09E-21 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 18.469 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 130 3.7E-32 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_1742 b5b060de0c6a5e75136b2ede6102c751 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 3.4E-26 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 2.9E-6 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 96 116 2.9E-6 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 2.9E-6 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 Pfam PF00355 Rieske [2Fe-2S] domain 46 120 1.4E-10 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 Gene3D G3DSA:2.102.10.10 41 154 1.5E-17 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 172 365 1.7E-29 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 SUPERFAMILY SSF55961 162 368 2.59E-38 T 11-10-2018 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 SUPERFAMILY SSF50022 12 143 2.75E-29 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0882 26a6454017d55b0e66d499c5ed41c5bf 370 Gene3D G3DSA:3.90.380.10 214 370 5.1E-8 T 11-10-2018 Tbd_1527 257c39890102fe859a41fa722bf5b73f 207 Pfam PF01300 Telomere recombination 23 198 5.6E-43 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Tbd_1527 257c39890102fe859a41fa722bf5b73f 207 SUPERFAMILY SSF55821 1 203 1.04E-64 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tbd_1527 257c39890102fe859a41fa722bf5b73f 207 Gene3D G3DSA:3.90.870.10 1 206 1.7E-64 T 11-10-2018 Tbd_1527 257c39890102fe859a41fa722bf5b73f 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 4.1E-61 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 Pfam PF13356 Arm DNA-binding domain 2 86 3.8E-20 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 SUPERFAMILY SSF56349 98 380 6.67E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 Gene3D G3DSA:1.10.443.10 209 380 7.9E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 Gene3D G3DSA:3.30.160.390 1 87 4.3E-32 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 Gene3D G3DSA:1.10.150.130 88 204 1.2E-34 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_0943 bfb7ab1369e4d42699549238f7da2fe5 400 Pfam PF00589 Phage integrase family 229 357 4.9E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_0491 b378bfcfe3d23539bab039dc939004f1 446 Pfam PF01957 NfeD-like C-terminal, partner-binding 303 440 3.0E-39 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain Tbd_0491 b378bfcfe3d23539bab039dc939004f1 446 Gene3D G3DSA:3.90.226.10 19 253 2.3E-63 T 11-10-2018 Tbd_0491 b378bfcfe3d23539bab039dc939004f1 446 SUPERFAMILY SSF52096 4 202 1.99E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_0491 b378bfcfe3d23539bab039dc939004f1 446 SUPERFAMILY SSF141322 375 438 1.96E-12 T 11-10-2018 Tbd_0491 b378bfcfe3d23539bab039dc939004f1 446 Gene3D G3DSA:2.40.50.140 378 446 3.9E-14 T 11-10-2018 Tbd_1489 18f3f2925f720ef99c34f0f844886f0f 331 Pfam PF01661 Macro domain 5 117 1.5E-21 T 11-10-2018 IPR002589 Macro domain Tbd_1489 18f3f2925f720ef99c34f0f844886f0f 331 SMART SM00506 2 119 5.5E-14 T 11-10-2018 IPR002589 Macro domain Tbd_1489 18f3f2925f720ef99c34f0f844886f0f 331 Gene3D G3DSA:3.40.220.10 1 134 2.8E-41 T 11-10-2018 Tbd_1489 18f3f2925f720ef99c34f0f844886f0f 331 SUPERFAMILY SSF52949 1 134 2.19E-42 T 11-10-2018 Tbd_2755 08133c2ac5f75e5860c8783bd9bf0ff6 155 SUPERFAMILY SSF54637 11 102 8.2E-9 T 11-10-2018 IPR029069 HotDog domain superfamily Tbd_2755 08133c2ac5f75e5860c8783bd9bf0ff6 155 Gene3D G3DSA:3.10.129.10 2 150 2.3E-6 T 11-10-2018 Tbd_0458 e5f4942757d02f89ddc17593faad7058 438 Gene3D G3DSA:3.10.450.350 63 152 7.6E-15 T 11-10-2018 Tbd_0458 e5f4942757d02f89ddc17593faad7058 438 Pfam PF01551 Peptidase family M23 300 396 4.3E-32 T 11-10-2018 IPR016047 Peptidase M23 Tbd_0458 e5f4942757d02f89ddc17593faad7058 438 Gene3D G3DSA:3.10.450.350 177 417 1.3E-90 T 11-10-2018 Tbd_0458 e5f4942757d02f89ddc17593faad7058 438 Gene3D G3DSA:2.70.70.10 271 402 1.3E-90 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_0458 e5f4942757d02f89ddc17593faad7058 438 SUPERFAMILY SSF51261 146 398 4.92E-67 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 Gene3D G3DSA:3.40.50.12240 21 464 2.0E-153 T 11-10-2018 Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 28 460 4.3E-195 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 172 383 2.7E-75 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 24 463 8.8E-170 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 SMART SM00382 184 367 7.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 374 383 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1091 8269f8a436017927c9d82bb6dc25455f 464 SUPERFAMILY SSF52540 119 388 3.85E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PIRSF PIRSF005419 4 691 4.9E-247 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 687 1.8E-270 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 Gene3D G3DSA:1.10.490.80 592 688 3.9E-9 T 11-10-2018 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 176 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 139 155 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 239 253 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 188 205 2.8E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 144 167 - T 11-10-2018 IPR025505 FHIPEP conserved site Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 Gene3D G3DSA:1.10.8.540 501 589 1.3E-26 T 11-10-2018 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 Pfam PF00771 FHIPEP family 28 679 2.3E-268 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1246 948b05e3065f366f965f4b56eb5a4f88 692 Gene3D G3DSA:3.40.30.60 357 500 1.4E-51 T 11-10-2018 Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 Gene3D G3DSA:3.40.390.30 3 147 1.6E-42 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 109 119 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 6 143 20.843 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 Pfam PF02130 Uncharacterized protein family UPF0054 21 139 5.0E-32 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 139 1.1E-31 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tbd_2704 c64adc7782d88f7f51411218f1a8d1aa 147 SUPERFAMILY SSF55486 12 145 4.88E-40 T 11-10-2018 Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 303 1.4E-41 T 11-10-2018 IPR000160 GGDEF domain Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 SMART SM00091 2 68 4.5E-8 T 11-10-2018 IPR000014 PAS domain Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 Gene3D G3DSA:3.30.450.20 1 121 6.3E-29 T 11-10-2018 Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 305 1.5E-46 T 11-10-2018 IPR000160 GGDEF domain Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 SUPERFAMILY SSF55785 13 126 1.73E-27 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 Pfam PF13426 PAS domain 12 117 3.3E-15 T 11-10-2018 IPR000014 PAS domain Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 SUPERFAMILY SSF55073 148 308 3.3E-45 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 Gene3D G3DSA:3.30.70.270 128 309 1.9E-54 T 11-10-2018 Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 SMART SM00267 132 307 4.9E-58 T 11-10-2018 IPR000160 GGDEF domain Tbd_2814 74507178f0844c9dda3f890a7ff5f4a0 321 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 125 2.1E-25 T 11-10-2018 IPR000014 PAS domain Tbd_1359 6e82c1f841f02de967c12fc4d9d84b4e 236 SMART SM00382 34 231 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1359 6e82c1f841f02de967c12fc4d9d84b4e 236 Pfam PF00005 ABC transporter 25 176 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1359 6e82c1f841f02de967c12fc4d9d84b4e 236 Gene3D G3DSA:3.40.50.300 5 233 9.3E-62 T 11-10-2018 Tbd_1359 6e82c1f841f02de967c12fc4d9d84b4e 236 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1359 6e82c1f841f02de967c12fc4d9d84b4e 236 SUPERFAMILY SSF52540 6 229 1.54E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0346 f2279508d4a2ef374baa7e0b05bf276c 246 Gene3D G3DSA:3.40.1350.10 19 234 1.0E-7 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Tbd_0346 f2279508d4a2ef374baa7e0b05bf276c 246 SUPERFAMILY SSF52980 23 95 2.2E-9 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tbd_0800 6d697f6f116ccaf77ac1b9f24e010a40 151 Pfam PF05425 Copper resistance protein D 45 143 6.0E-15 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 Tbd_0112 45b119678d00152023c7a2b371628328 90 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 16.419 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Tbd_0112 45b119678d00152023c7a2b371628328 90 Pfam PF04999 Cell division protein FtsL 3 82 3.2E-21 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Tbd_0112 45b119678d00152023c7a2b371628328 90 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 83 3.5E-22 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 Gene3D G3DSA:2.40.100.10 1 163 4.3E-70 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 PIRSF PIRSF001467 1 163 3.9E-28 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.0E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 7.8E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_1904 2c2c5f7f1434752b00d7a56b5f0b5fe1 163 SUPERFAMILY SSF50891 1 162 7.6E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 168 1.4E-60 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 PIRSF PIRSF000216 2 168 9.6E-58 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 Gene3D G3DSA:3.40.30.10 85 168 5.3E-28 T 11-10-2018 Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 Gene3D G3DSA:1.10.10.1590 12 84 4.0E-24 T 11-10-2018 Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 168 1.8E-53 T 11-10-2018 Tbd_1146 9dea9e3db7c05f4f53e8b72fd0da09e5 168 SUPERFAMILY SSF52833 14 167 5.48E-55 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 429 6.1E-152 T 11-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 SUPERFAMILY SSF54862 222 317 5.1E-12 T 11-10-2018 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 Gene3D G3DSA:3.30.70.2500 54 158 4.1E-40 T 11-10-2018 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 88 151 5.2E-7 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 161 397 8.8E-34 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 SUPERFAMILY SSF55124 7 161 2.04E-58 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 SUPERFAMILY SSF56014 163 419 1.45E-48 T 11-10-2018 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 Gene3D G3DSA:3.30.70.20 233 321 1.1E-94 T 11-10-2018 Tbd_1309 e7fddd19e7e788cbcefbebff14be4a1e 434 Gene3D G3DSA:3.30.413.10 159 413 1.1E-94 T 11-10-2018 Tbd_2219 b6143adbd395a5a9172135d735a2b66e 203 Pfam PF07290 Protein of unknown function (DUF1449) 9 198 3.1E-69 T 11-10-2018 IPR010840 Protein of unknown function DUF1449 Tbd_2761 bb2fa67cca264c56f97ce1f1f8889176 279 Pfam PF06629 MltA-interacting protein MipA 34 266 1.9E-34 T 11-10-2018 IPR010583 MltA-interacting MipA Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 303 315 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 8.2E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 SUPERFAMILY SSF50156 262 358 2.53E-24 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Gene3D G3DSA:2.40.10.120 23 256 1.3E-81 T 11-10-2018 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 SMART SM00228 374 452 6.8E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 SMART SM00228 263 345 1.8E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Gene3D G3DSA:2.30.42.60 369 464 2.1E-16 T 11-10-2018 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Gene3D G3DSA:2.30.42.10 258 365 1.3E-29 T 11-10-2018 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Pfam PF13365 Trypsin-like peptidase domain 91 224 2.6E-36 T 11-10-2018 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 SUPERFAMILY SSF50156 377 460 2.89E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 SUPERFAMILY SSF50494 4 272 3.92E-67 T 11-10-2018 IPR009003 Peptidase S1, PA clan Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Pfam PF13180 PDZ domain 264 354 6.0E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 Pfam PF13180 PDZ domain 394 457 2.1E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_2091 2bf507c08ed373b78662930ae2ceefaa 464 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 24 457 9.3E-154 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Tbd_0105 729ce3cf905ebdc6c22e87c15b391739 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 28 91 5.7E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_0105 729ce3cf905ebdc6c22e87c15b391739 159 Pfam PF01467 Cytidylyltransferase-like 30 121 4.5E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_0105 729ce3cf905ebdc6c22e87c15b391739 159 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 17 158 3.7E-57 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Tbd_0105 729ce3cf905ebdc6c22e87c15b391739 159 SUPERFAMILY SSF52374 26 157 1.32E-21 T 11-10-2018 Tbd_0105 729ce3cf905ebdc6c22e87c15b391739 159 Gene3D G3DSA:3.40.50.620 15 159 4.5E-32 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2564 4bd9afe4b52977a3e7a7c362bfbcb565 173 Pfam PF03625 Domain of unknown function DUF302 74 134 4.9E-11 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_2564 4bd9afe4b52977a3e7a7c362bfbcb565 173 Gene3D G3DSA:3.30.310.70 37 167 6.3E-10 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2564 4bd9afe4b52977a3e7a7c362bfbcb565 173 SUPERFAMILY SSF103247 44 166 9.02E-24 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2393 2b7e8e93ff11c989ade5149bde8771d9 412 Pfam PF01551 Peptidase family M23 313 407 1.5E-25 T 11-10-2018 IPR016047 Peptidase M23 Tbd_2393 2b7e8e93ff11c989ade5149bde8771d9 412 Gene3D G3DSA:2.70.70.10 276 411 3.3E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_2393 2b7e8e93ff11c989ade5149bde8771d9 412 SUPERFAMILY SSF51261 201 410 7.32E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 SMART SM00100 16 135 4.4E-22 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 144 218 0.007 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 Pfam PF00027 Cyclic nucleotide-binding domain 36 121 5.4E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 Gene3D G3DSA:1.10.10.10 150 223 1.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 SUPERFAMILY SSF51206 10 150 1.31E-33 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 Pfam PF13545 Crp-like helix-turn-helix domain 155 223 2.3E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 Gene3D G3DSA:2.60.120.10 6 149 1.3E-40 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 SMART SM00419 169 217 4.0E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tbd_2593 52ce8cce36152a3ec5f69b5074a98703 254 SUPERFAMILY SSF46785 153 223 1.65E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 Gene3D G3DSA:2.40.500.20 84 194 1.6E-38 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 Gene3D G3DSA:1.10.287.990 20 83 2.5E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 SUPERFAMILY SSF46609 1 88 7.33E-34 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PIRSF PIRSF000349 1 194 7.5E-79 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.5E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.5E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 2.5E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 2.5E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 2.5E-22 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 SUPERFAMILY SSF54719 85 193 2.1E-40 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.1E-33 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_1015 309c51ce4b28bcc251e27a0016b6c210 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 191 2.1E-35 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Gene3D G3DSA:1.10.760.10 255 381 4.0E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 113 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 162 183 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 134 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 PRINTS PR01166 Cytochrome c oxidase subunit II signature 186 206 1.6E-37 T 11-10-2018 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 275 348 2.8E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 235 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 SUPERFAMILY SSF46626 261 362 3.15E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 31 251 1.9E-58 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 23 105 3.3E-18 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Gene3D G3DSA:2.60.40.420 115 251 6.1E-82 T 11-10-2018 IPR008972 Cupredoxin Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 119 242 7.3E-37 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 SUPERFAMILY SSF81464 24 113 8.67E-27 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 SUPERFAMILY SSF49503 111 306 1.98E-52 T 11-10-2018 IPR008972 Cupredoxin Tbd_0325 37f9158d9c77b73765f19bb5000636a6 382 Gene3D G3DSA:1.10.287.90 43 114 6.1E-82 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 SUPERFAMILY SSF55785 14 102 3.81E-6 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 SUPERFAMILY SSF55874 201 360 4.45E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 SMART SM00388 133 198 6.5E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 SUPERFAMILY SSF47384 123 195 2.55E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Gene3D G3DSA:3.30.450.20 12 116 1.5E-12 T 11-10-2018 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Gene3D G3DSA:3.30.565.10 198 361 1.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 193 2.6E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 362 2.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 SMART SM00387 236 363 2.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Pfam PF00989 PAS fold 17 113 1.4E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_2501 86f1ee1cc0634d59cc0cae9be503b6cc 363 Gene3D G3DSA:1.10.287.130 137 194 3.2E-14 T 11-10-2018 Tbd_2647 2955fbf27076079899afcb54a3e35c7d 105 SUPERFAMILY SSF159133 1 83 4.97E-23 T 11-10-2018 IPR036677 EutN/Ccml superfamily Tbd_2647 2955fbf27076079899afcb54a3e35c7d 105 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 8.3E-17 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tbd_2647 2955fbf27076079899afcb54a3e35c7d 105 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 80 6.7E-43 T 11-10-2018 IPR014077 Carboxysome peptide B Tbd_2647 2955fbf27076079899afcb54a3e35c7d 105 Gene3D G3DSA:2.40.50.220 1 89 2.4E-28 T 11-10-2018 IPR036677 EutN/Ccml superfamily Tbd_2647 2955fbf27076079899afcb54a3e35c7d 105 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 80 6.0E-27 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tbd_2467 b88df51a965ad1f3f3dc6ff2dd875bdb 336 Pfam PF01180 Dihydroorotate dehydrogenase 85 290 1.6E-8 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tbd_2467 b88df51a965ad1f3f3dc6ff2dd875bdb 336 PIRSF PIRSF000164 1 307 1.2E-32 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Tbd_2467 b88df51a965ad1f3f3dc6ff2dd875bdb 336 Gene3D G3DSA:3.20.20.70 2 309 1.8E-49 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2467 b88df51a965ad1f3f3dc6ff2dd875bdb 336 SUPERFAMILY SSF51395 1 306 1.92E-56 T 11-10-2018 Tbd_0208 15cd1f1e809d6ff2c8093e5afb3f215f 773 Pfam PF04892 VanZ like family 321 445 1.6E-10 T 11-10-2018 IPR006976 VanZ-like Tbd_0208 15cd1f1e809d6ff2c8093e5afb3f215f 773 Pfam PF04892 VanZ like family 61 141 1.5E-12 T 11-10-2018 IPR006976 VanZ-like Tbd_0208 15cd1f1e809d6ff2c8093e5afb3f215f 773 Pfam PF04892 VanZ like family 194 285 8.7E-10 T 11-10-2018 IPR006976 VanZ-like Tbd_2658 7d583d130c483f8c139997b647f4e400 110 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 110 4.7E-37 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2658 7d583d130c483f8c139997b647f4e400 110 Gene3D G3DSA:1.10.10.370 40 110 1.8E-24 T 11-10-2018 Tbd_2658 7d583d130c483f8c139997b647f4e400 110 PIRSF PIRSF006223 3 110 3.0E-41 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2658 7d583d130c483f8c139997b647f4e400 110 Pfam PF04358 DsrC like protein 4 110 1.3E-38 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2658 7d583d130c483f8c139997b647f4e400 110 SUPERFAMILY SSF69721 2 110 2.49E-36 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2658 7d583d130c483f8c139997b647f4e400 110 Gene3D G3DSA:3.30.1420.10 4 39 6.3E-14 T 11-10-2018 Tbd_1197 724d6acb748d0520025020325fd64f54 92 Pfam PF13453 Transcription factor zinc-finger 2 43 7.5E-22 T 11-10-2018 IPR027392 Transcription factor zinc-finger Tbd_2565 3e074afa6d19e6340942e78e721d6b33 390 SUPERFAMILY SSF48452 246 386 3.8E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2565 3e074afa6d19e6340942e78e721d6b33 390 Pfam PF07219 HemY protein N-terminus 26 131 4.3E-22 T 11-10-2018 IPR010817 HemY, N-terminal Tbd_2565 3e074afa6d19e6340942e78e721d6b33 390 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 383 2.3E-128 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 Tbd_2565 3e074afa6d19e6340942e78e721d6b33 390 Gene3D G3DSA:1.25.40.10 152 390 6.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 SUPERFAMILY SSF52540 3 292 2.32E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 Gene3D G3DSA:3.40.50.300 1 295 6.8E-118 T 11-10-2018 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 PRINTS PR00478 Phosphoribulokinase family signature 133 151 9.2E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 PRINTS PR00478 Phosphoribulokinase family signature 189 212 9.2E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 PRINTS PR00478 Phosphoribulokinase family signature 171 188 9.2E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 PRINTS PR00478 Phosphoribulokinase family signature 12 29 9.2E-35 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_2447 963028b2136f7cfd86749ad98da77f40 295 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 221 5.9E-73 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Tbd_1080 e1937c92dc5fd1721bb8684b332361d3 350 SUPERFAMILY SSF53756 1 328 8.52E-68 T 11-10-2018 Tbd_1080 e1937c92dc5fd1721bb8684b332361d3 350 Pfam PF13692 Glycosyl transferases group 1 179 299 8.3E-19 T 11-10-2018 Tbd_1080 e1937c92dc5fd1721bb8684b332361d3 350 Gene3D G3DSA:3.40.50.2000 1 176 6.5E-25 T 11-10-2018 Tbd_1080 e1937c92dc5fd1721bb8684b332361d3 350 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.8E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_1080 e1937c92dc5fd1721bb8684b332361d3 350 Gene3D G3DSA:3.40.50.2000 177 321 6.2E-24 T 11-10-2018 Tbd_1030 f8297f88300aa32fb281967406f5ea1a 186 SMART SM00867 24 184 4.7E-46 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1030 f8297f88300aa32fb281967406f5ea1a 186 Gene3D G3DSA:2.40.128.110 26 185 3.1E-37 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1030 f8297f88300aa32fb281967406f5ea1a 186 Pfam PF04264 YceI-like domain 27 182 1.4E-30 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Tbd_1030 f8297f88300aa32fb281967406f5ea1a 186 SUPERFAMILY SSF101874 27 183 8.11E-40 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 3.2E-178 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.7 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 SUPERFAMILY SSF55205 1 416 1.47E-142 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 Gene3D G3DSA:3.65.10.10 6 413 3.5E-168 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 Gene3D G3DSA:3.65.10.10 21 229 3.5E-168 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tbd_1891 72142822abc4b0a5b1bb7b83ad25eb86 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 1.7E-113 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tbd_2460 25205b464099c02d3a23769bfde7a425 188 SUPERFAMILY SSF55821 15 187 1.37E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tbd_2460 25205b464099c02d3a23769bfde7a425 188 Pfam PF01300 Telomere recombination 17 187 2.4E-40 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Tbd_2460 25205b464099c02d3a23769bfde7a425 188 Gene3D G3DSA:3.90.870.10 8 187 1.0E-55 T 11-10-2018 Tbd_2460 25205b464099c02d3a23769bfde7a425 188 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 8 187 35.726 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 68 7.2E-22 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 Pfam PF02416 mttA/Hcf106 family 4 34 3.2E-9 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 138 16.148 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.2E-17 T 11-10-2018 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.2E-17 T 11-10-2018 Tbd_1703 0aec12be523d2c002b580740aa13b160 149 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.2E-17 T 11-10-2018 Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 6.2E-67 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 Gene3D G3DSA:3.30.70.990 9 94 2.6E-29 T 11-10-2018 IPR035570 UPF0234, N-terminal Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 Gene3D G3DSA:3.30.70.860 95 161 2.5E-27 T 11-10-2018 IPR035571 UPF0234-like, C-terminal Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 SUPERFAMILY SSF89963 2 87 1.1E-31 T 11-10-2018 IPR036183 YajQ-like superfamily Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 SUPERFAMILY SSF89963 89 161 2.25E-25 T 11-10-2018 IPR036183 YajQ-like superfamily Tbd_1846 6e94d54cb35fadc374f1af276f80b39f 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 27.667 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Tbd_2615 3478e2252a1bc09e290f3daea4a60cee 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 7.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2615 3478e2252a1bc09e290f3daea4a60cee 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 78 111 3.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2615 3478e2252a1bc09e290f3daea4a60cee 186 Gene3D G3DSA:2.160.10.10 1 183 2.7E-48 T 11-10-2018 Tbd_2615 3478e2252a1bc09e290f3daea4a60cee 186 SUPERFAMILY SSF51161 7 138 1.7E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_1987 b3cf9143af76193da950119751ff8efd 262 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 65 87 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_1987 b3cf9143af76193da950119751ff8efd 262 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 31 192 9.7E-34 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Tbd_1987 b3cf9143af76193da950119751ff8efd 262 Pfam PF01066 CDP-alcohol phosphatidyltransferase 24 87 2.5E-12 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_1987 b3cf9143af76193da950119751ff8efd 262 Gene3D G3DSA:1.20.120.1760 2 143 6.2E-15 T 11-10-2018 Tbd_1053 f29c135f89036609b395029b43d725ae 180 Pfam PF02635 DsrE/DsrF-like family 47 161 1.4E-15 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_1053 f29c135f89036609b395029b43d725ae 180 Gene3D G3DSA:3.40.1260.10 47 161 2.5E-23 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1053 f29c135f89036609b395029b43d725ae 180 SUPERFAMILY SSF75169 49 161 1.47E-22 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 SMART SM00283 260 507 2.0E-98 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 475 1.0E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 Gene3D G3DSA:1.10.287.950 215 509 3.3E-89 T 11-10-2018 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 201 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 17 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 2.4E-61 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1619 499753c7b489b3e867bff48cc4c0a960 559 SUPERFAMILY SSF58104 238 508 8.11E-75 T 11-10-2018 Tbd_1821 02650f7b9cf919fe280dc8890309a690 565 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 123 505 2.3E-126 T 11-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Tbd_1821 02650f7b9cf919fe280dc8890309a690 565 Gene3D G3DSA:3.40.50.300 104 505 1.7E-111 T 11-10-2018 Tbd_1821 02650f7b9cf919fe280dc8890309a690 565 SUPERFAMILY SSF52540 121 510 4.96E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1821 02650f7b9cf919fe280dc8890309a690 565 Gene3D G3DSA:1.10.8.80 198 306 1.7E-111 T 11-10-2018 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 PIRSF PIRSF002162 1 176 2.3E-43 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 2.1E-72 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 PRINTS PR00059 Ribosomal protein L6 signature 98 114 2.1E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 PRINTS PR00059 Ribosomal protein L6 signature 70 95 2.1E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 PRINTS PR00059 Ribosomal protein L6 signature 140 161 2.1E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 SUPERFAMILY SSF56053 1 81 1.15E-20 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 Pfam PF00347 Ribosomal protein L6 89 163 8.2E-21 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 Pfam PF00347 Ribosomal protein L6 11 81 3.7E-13 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 Gene3D G3DSA:3.90.930.12 82 176 1.1E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 SUPERFAMILY SSF56053 82 176 6.02E-36 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 36.853 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tbd_0420 2fe1a13e03d9191643927a4d46964448 176 Gene3D G3DSA:3.90.930.12 1 81 3.5E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 SUPERFAMILY SSF56601 21 290 1.98E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 290 382 6.5E-19 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 SMART SM00936 290 382 1.8E-28 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 Gene3D G3DSA:2.60.410.10 290 382 1.2E-21 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 77 88 2.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 147 2.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 157 170 2.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 SUPERFAMILY SSF69189 290 384 3.73E-20 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 Gene3D G3DSA:3.40.710.10 39 289 2.9E-87 T 11-10-2018 Tbd_0647 33c5bddd91bd194719878f0e6c51568b 402 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 45 269 5.4E-78 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tbd_2757 8de39d7c3a73985c613a67a579aa7d2d 442 Pfam PF00999 Sodium/hydrogen exchanger family 17 410 1.7E-51 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Tbd_2757 8de39d7c3a73985c613a67a579aa7d2d 442 Gene3D G3DSA:1.20.1530.20 10 421 6.1E-90 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_2626 590046bee222d701ab56e38aa916f714 518 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 8 487 1.3E-199 T 11-10-2018 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 MetaCyc: PWY-7902 Tbd_2626 590046bee222d701ab56e38aa916f714 518 Gene3D G3DSA:3.40.50.2000 33 484 4.1E-141 T 11-10-2018 Tbd_2626 590046bee222d701ab56e38aa916f714 518 Gene3D G3DSA:3.40.50.2000 266 473 4.1E-141 T 11-10-2018 Tbd_2626 590046bee222d701ab56e38aa916f714 518 SUPERFAMILY SSF53756 4 489 8.9E-132 T 11-10-2018 Tbd_2626 590046bee222d701ab56e38aa916f714 518 Pfam PF00982 Glycosyltransferase family 20 5 486 3.1E-136 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Tbd_0804 6db302c23d89fcf800d23bde5ce95a65 402 SUPERFAMILY SSF55729 196 361 3.89E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0804 6db302c23d89fcf800d23bde5ce95a65 402 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 26 391 3.3E-143 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition Tbd_0804 6db302c23d89fcf800d23bde5ce95a65 402 Gene3D G3DSA:3.40.630.30 190 346 2.6E-8 T 11-10-2018 Tbd_2131 6b23ba7f696d285b6c550d7e4486ecaa 110 SUPERFAMILY SSF69721 3 100 1.01E-25 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2131 6b23ba7f696d285b6c550d7e4486ecaa 110 Gene3D G3DSA:1.10.10.370 42 101 1.5E-6 T 11-10-2018 Tbd_2131 6b23ba7f696d285b6c550d7e4486ecaa 110 Gene3D G3DSA:3.30.1420.10 10 41 2.9E-5 T 11-10-2018 Tbd_2131 6b23ba7f696d285b6c550d7e4486ecaa 110 Pfam PF04358 DsrC like protein 13 99 3.3E-15 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 SUPERFAMILY SSF53732 2 466 1.18E-165 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.6E-236 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 467 60.114 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 120 133 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 344 355 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 109 117 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 196 209 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 83 96 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 287 301 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 401 414 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 134 149 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 PRINTS PR00415 Aconitase family signature 210 223 4.1E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 Gene3D G3DSA:3.30.499.10 329 467 1.4E-48 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 Pfam PF00330 Aconitase family (aconitate hydratase) 8 459 3.3E-158 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tbd_1922 32412f6a00a956db7fdd21b411f8781e 467 Gene3D G3DSA:3.30.499.20 5 287 4.4E-102 T 11-10-2018 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 SUPERFAMILY SSF111352 59 447 2.22E-128 T 11-10-2018 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 ProSitePatterns PS01219 Ammonium transporters signature. 223 248 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 TIGRFAM TIGR00836 amt: ammonium transporter 62 466 1.9E-137 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 PRINTS PR00342 Rhesus blood group protein signature 348 366 4.1E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 PRINTS PR00342 Rhesus blood group protein signature 262 280 4.1E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 PRINTS PR00342 Rhesus blood group protein signature 166 182 4.1E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 PRINTS PR00342 Rhesus blood group protein signature 293 315 4.1E-8 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 Gene3D G3DSA:1.10.3430.10 41 468 5.7E-139 T 11-10-2018 IPR029020 Ammonium/urea transporter Tbd_0241 5aaecd0f7b627627920744d4058b8bd2 468 Pfam PF00909 Ammonium Transporter Family 65 466 3.7E-124 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 SUPERFAMILY SSF69065 8 160 7.85E-48 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 223 1.2E-70 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 SMART SM00535 22 150 3.5E-52 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 SUPERFAMILY SSF54768 110 224 3.3E-25 T 11-10-2018 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 SMART SM00358 157 225 1.1E-19 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 Gene3D G3DSA:1.10.1520.10 6 148 2.3E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 29.301 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 Gene3D G3DSA:3.30.160.20 155 226 2.8E-19 T 11-10-2018 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 Pfam PF14622 Ribonuclease-III-like 23 141 4.5E-35 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tbd_2086 1ca65abd646865fc2e46c041e9bfab3b 226 Pfam PF00035 Double-stranded RNA binding motif 157 224 7.2E-12 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Gene3D G3DSA:3.10.150.10 249 367 2.3E-37 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 SUPERFAMILY SSF55979 7 120 5.32E-25 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Gene3D G3DSA:3.10.150.10 2 122 1.9E-37 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 SMART SM00480 18 363 6.1E-130 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 1.4E-31 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 SUPERFAMILY SSF55979 129 245 7.18E-29 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Gene3D G3DSA:3.10.150.10 128 248 7.0E-38 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 7.2E-34 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 1.3E-33 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 366 4.5E-99 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 SUPERFAMILY SSF55979 246 367 4.97E-37 T 11-10-2018 Tbd_0002 db9c6b020cf31e23a228d7af88323527 367 PIRSF PIRSF000804 2 367 3.9E-115 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 Gene3D G3DSA:3.60.21.10 28 381 7.6E-41 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 Gene3D G3DSA:3.90.780.10 419 594 1.5E-12 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 SUPERFAMILY SSF56300 29 380 1.28E-46 T 11-10-2018 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 PRINTS PR01607 Apyrase family signature 33 51 2.5E-5 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 PRINTS PR01607 Apyrase family signature 245 262 2.5E-5 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 PRINTS PR01607 Apyrase family signature 275 298 2.5E-5 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 PRINTS PR01607 Apyrase family signature 487 510 2.5E-5 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 SUPERFAMILY SSF55816 418 630 1.37E-12 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1286 00a8d7df2216800e65e2bbcd498007bd 687 Pfam PF00149 Calcineurin-like phosphoesterase 36 292 2.7E-6 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 277 2.1E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 76 89 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 279 1.1E-119 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Pfam PF04545 Sigma-70, region 4 225 277 2.6E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Gene3D G3DSA:1.10.601.10 4 121 4.8E-30 T 11-10-2018 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 PRINTS PR00046 Major sigma-70 factor signature 264 275 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 PRINTS PR00046 Major sigma-70 factor signature 229 241 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 PRINTS PR00046 Major sigma-70 factor signature 249 264 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 PRINTS PR00046 Major sigma-70 factor signature 76 89 3.2E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Pfam PF00140 Sigma-70 factor, region 1.2 14 43 1.3E-5 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Pfam PF04542 Sigma-70 region 2 52 120 4.6E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Gene3D G3DSA:1.20.140.160 127 280 3.1E-17 T 11-10-2018 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 PIRSF PIRSF000770 5 280 8.5E-36 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 SUPERFAMILY SSF88946 14 121 2.75E-39 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 281 49.096 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 249 275 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_0345 65697be13faa15ff175ecdb995d2ed8c 281 SUPERFAMILY SSF88659 188 279 1.87E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_0348 12580f8e4112a91b08fc58e991479543 215 SUPERFAMILY SSF52172 2 94 7.4E-20 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0348 12580f8e4112a91b08fc58e991479543 215 Gene3D G3DSA:1.10.10.10 97 198 9.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0348 12580f8e4112a91b08fc58e991479543 215 Gene3D G3DSA:3.40.50.2300 1 92 8.6E-19 T 11-10-2018 Tbd_0348 12580f8e4112a91b08fc58e991479543 215 Pfam PF00072 Response regulator receiver domain 3 84 1.8E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0348 12580f8e4112a91b08fc58e991479543 215 SUPERFAMILY SSF46894 95 188 1.9E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_0348 12580f8e4112a91b08fc58e991479543 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 118 188 1.2E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_0348 12580f8e4112a91b08fc58e991479543 215 SMART SM00862 118 204 7.7E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 401 8.0E-35 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 423 40.541 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 SUPERFAMILY SSF46589 1 111 2.56E-30 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PIRSF PIRSF001529 1 427 5.9E-178 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 SUPERFAMILY SSF55681 116 421 8.71E-100 T 11-10-2018 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 Gene3D G3DSA:1.10.287.40 1 104 3.8E-22 T 11-10-2018 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 418 3.7E-166 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.8E-31 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 1.8E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 1.8E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 1.8E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 1.8E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 1.8E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tbd_1229 3d3031de926828e7d8a4448da7d94311 427 Gene3D G3DSA:3.30.930.10 105 426 2.2E-115 T 11-10-2018 Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 Gene3D G3DSA:2.40.30.90 153 239 1.5E-20 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 Gene3D G3DSA:3.40.50.10790 1 152 5.5E-50 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 SUPERFAMILY SSF102522 1 149 9.29E-51 T 11-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 SUPERFAMILY SSF101852 159 238 7.85E-21 T 11-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 237 1.8E-74 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Tbd_0432 0bfd561e85eda6cfb803c8b96fd333ee 242 PIRSF PIRSF006779 1 240 1.0E-60 T 11-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.6E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.5E-38 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 SMART SM00411 1 91 1.9E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 Gene3D G3DSA:4.10.520.10 1 92 4.5E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_0957 b24d71c42ebbbc0093f2df7764ee9113 94 SUPERFAMILY SSF47729 1 91 2.36E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_1664 dd94e99f7ea9b84f30262846b84e45d2 245 SUPERFAMILY SSF53335 69 206 5.4E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1664 dd94e99f7ea9b84f30262846b84e45d2 245 Pfam PF08241 Methyltransferase domain 67 116 2.7E-9 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_1664 dd94e99f7ea9b84f30262846b84e45d2 245 Gene3D G3DSA:3.40.50.150 23 183 1.1E-15 T 11-10-2018 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 Gene3D G3DSA:1.10.40.30 382 446 1.9E-149 T 11-10-2018 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 Gene3D G3DSA:1.10.275.10 1 117 1.0E-47 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 Gene3D G3DSA:1.20.200.10 118 447 1.9E-149 T 11-10-2018 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 SUPERFAMILY SSF48557 4 448 1.88E-105 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 Pfam PF00206 Lyase 14 312 1.0E-61 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 452 6.0E-127 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 7.6E-18 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.6E-18 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 7.6E-18 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.6E-18 T 11-10-2018 IPR000362 Fumarate lyase family Tbd_0518 d7e59789d8c2e64c53a37c2c35ce1259 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 446 2.9E-49 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Tbd_0330 3c7ccba475ea4ade2d3e10d6c9e71e86 288 SUPERFAMILY SSF81452 5 287 1.12E-83 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0330 3c7ccba475ea4ade2d3e10d6c9e71e86 288 Pfam PF00510 Cytochrome c oxidase subunit III 8 286 5.2E-60 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0330 3c7ccba475ea4ade2d3e10d6c9e71e86 288 Gene3D G3DSA:1.20.120.80 73 288 4.4E-67 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0330 3c7ccba475ea4ade2d3e10d6c9e71e86 288 Gene3D G3DSA:1.10.287.70 1 72 1.7E-22 T 11-10-2018 Tbd_0283 01938e02e514068f884a69bfe4d4aa0f 306 Pfam PF13614 AAA domain 117 278 1.1E-11 T 11-10-2018 IPR025669 AAA domain Tbd_0283 01938e02e514068f884a69bfe4d4aa0f 306 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 78 286 6.4E-93 T 11-10-2018 Tbd_0283 01938e02e514068f884a69bfe4d4aa0f 306 Gene3D G3DSA:3.40.50.300 44 306 8.8E-55 T 11-10-2018 Tbd_0283 01938e02e514068f884a69bfe4d4aa0f 306 SUPERFAMILY SSF52540 115 297 6.65E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0978 f1a5f84575d4098c37081047cb2e892f 308 Pfam PF02470 MlaD protein 40 93 7.5E-6 T 11-10-2018 IPR003399 Mce/MlaD Tbd_0523 3a406c05d9a154b6d3c296429ce396f5 181 Pfam PF07589 PEP-CTERM motif 151 171 2.0E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0523 3a406c05d9a154b6d3c296429ce396f5 181 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 152 173 2.2E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82693 562 649 1.99E-5 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82693 148 334 1.2E-15 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.70.1320 147 335 7.8E-245 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.70.1440 664 864 7.8E-245 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:1.20.1640.10 508 1013 7.8E-245 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.2090.10 715 803 7.8E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82714 716 801 4.84E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82714 196 276 3.79E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82693 51 146 2.96E-18 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.2090.10 191 282 7.8E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:1.20.1640.10 21 507 7.8E-245 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82866 797 1020 5.49E-44 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 367 388 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 PRINTS PR00702 Acriflavin resistance protein family signature 395 419 3.8E-21 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 SUPERFAMILY SSF82866 311 499 3.4E-35 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Pfam PF00873 AcrB/AcrD/AcrF family 15 1014 1.0E-161 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.70.1430 51 811 7.8E-245 T 11-10-2018 Tbd_2531 cbcff01402c1819247e484cafaaa1775 1022 Gene3D G3DSA:3.30.70.1430 565 663 7.8E-245 T 11-10-2018 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 Gene3D G3DSA:3.40.50.1440 4 219 9.6E-79 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 SUPERFAMILY SSF52490 13 207 1.96E-67 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 Gene3D G3DSA:3.30.1330.20 220 331 1.0E-32 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 Pfam PF12327 FtsZ family, C-terminal domain 221 315 9.3E-30 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 342 36.732 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.8E-45 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.8E-45 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 PRINTS PR00423 Cell division protein FtsZ signature 188 210 1.8E-45 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 PRINTS PR00423 Cell division protein FtsZ signature 211 232 1.8E-45 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 326 2.8E-125 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 9.5E-40 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 SMART SM00864 13 204 3.4E-110 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 SMART SM00865 206 324 5.3E-54 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Tbd_0125 139b446d564b10fd2098d2ede3c91760 380 SUPERFAMILY SSF55307 203 318 1.47E-40 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Tbd_1118 c58cbc030006d1787733663c701d12a3 285 Pfam PF02678 Pirin 21 121 2.2E-35 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Tbd_1118 c58cbc030006d1787733663c701d12a3 285 Gene3D G3DSA:2.60.120.10 143 245 1.3E-98 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1118 c58cbc030006d1787733663c701d12a3 285 PIRSF PIRSF006232 2 282 1.2E-100 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Tbd_1118 c58cbc030006d1787733663c701d12a3 285 Gene3D G3DSA:2.60.120.10 17 271 1.3E-98 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1118 c58cbc030006d1787733663c701d12a3 285 Pfam PF05726 Pirin C-terminal cupin domain 175 275 4.3E-30 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Tbd_1118 c58cbc030006d1787733663c701d12a3 285 SUPERFAMILY SSF51182 3 277 8.69E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 Gene3D G3DSA:3.80.30.20 377 625 3.6E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 ProSitePatterns PS00208 Plant hemoglobins signature. 305 316 - T 11-10-2018 IPR019824 Leghaemoglobin, iron-binding site GO:0019825|GO:0020037 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 Pfam PF04055 Radical SAM superfamily 382 587 1.7E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 SUPERFAMILY SSF102114 357 614 1.57E-13 T 11-10-2018 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 21 649 48.29 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 SMART SM00729 378 630 7.5E-10 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 Pfam PF11842 Domain of unknown function (DUF3362) 596 747 9.6E-57 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 Pfam PF08497 Radical SAM N-terminal 21 381 1.0E-138 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 21 647 8.1E-256 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 Tbd_2153 6ebcc762602314cb01e8fb9fcaa9f477 763 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 382 402 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Pfam PF00072 Response regulator receiver domain 3 113 8.3E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 SMART SM00382 155 298 2.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Gene3D G3DSA:1.10.8.60 306 386 9.0E-15 T 11-10-2018 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Gene3D G3DSA:1.10.10.60 403 445 5.1E-11 T 11-10-2018 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Pfam PF02954 Bacterial regulatory protein, Fis family 404 443 1.5E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Gene3D G3DSA:3.40.50.300 128 305 6.8E-65 T 11-10-2018 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 SUPERFAMILY SSF52172 1 180 4.27E-43 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0904 b007cd9b40e531436597add4722d0d27 454 SMART SM00448 1 112 6.0E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 SUPERFAMILY SSF52540 134 379 1.51E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0904 b007cd9b40e531436597add4722d0d27 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 1.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 1.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-39 T 11-10-2018 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 Pfam PF00158 Sigma-54 interaction domain 136 301 4.6E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0904 b007cd9b40e531436597add4722d0d27 454 SUPERFAMILY SSF46689 402 445 1.49E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 SUPERFAMILY SSF52922 187 324 2.75E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 7.1E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 SUPERFAMILY SSF52518 3 203 1.39E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 Gene3D G3DSA:3.40.50.970 1 190 1.1E-74 T 11-10-2018 Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 Gene3D G3DSA:3.40.50.920 191 325 1.9E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 Pfam PF02780 Transketolase, C-terminal domain 196 316 4.1E-33 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Tbd_0654 17591a51c6927bb9834dd8e4c4914e80 327 SMART SM00861 4 179 1.2E-57 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 SMART SM00116 156 204 1.1E-6 T 11-10-2018 IPR000644 CBS domain Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 SMART SM00116 95 142 3.7E-10 T 11-10-2018 IPR000644 CBS domain Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 6.5E-162 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 3.7E-195 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 PIRSF PIRSF000130 1 486 3.1E-204 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 Gene3D G3DSA:3.20.20.70 1 485 4.6E-213 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 SMART SM01240 6 472 0.0 T 11-10-2018 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.274 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 SUPERFAMILY SSF54631 94 201 1.0E-28 T 11-10-2018 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 SUPERFAMILY SSF51412 2 476 4.19E-124 T 11-10-2018 Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 Pfam PF00571 CBS domain 147 199 1.8E-6 T 11-10-2018 IPR000644 CBS domain Tbd_1752 c439b8b26d62bce2331b8e49c31859b4 486 Pfam PF00571 CBS domain 94 138 6.0E-12 T 11-10-2018 IPR000644 CBS domain Tbd_1543 1f08c64341b3ab04ab1b2ed658ad7807 204 Gene3D G3DSA:3.40.50.300 2 204 4.8E-65 T 11-10-2018 Tbd_1543 1f08c64341b3ab04ab1b2ed658ad7807 204 Pfam PF02223 Thymidylate kinase 10 196 1.0E-48 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Tbd_1543 1f08c64341b3ab04ab1b2ed658ad7807 204 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 196 6.5E-51 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tbd_1543 1f08c64341b3ab04ab1b2ed658ad7807 204 Hamap MF_00165 Thymidylate kinase [tmk]. 6 204 29.63 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tbd_1543 1f08c64341b3ab04ab1b2ed658ad7807 204 SUPERFAMILY SSF52540 5 202 1.06E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2466 a458eb1a2b5210f52a096556d30c6f1b 273 Pfam PF08867 FRG domain 38 146 1.3E-19 T 11-10-2018 IPR014966 FRG domain Tbd_2466 a458eb1a2b5210f52a096556d30c6f1b 273 SMART SM00901 34 153 1.3E-30 T 11-10-2018 IPR014966 FRG domain Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 1.3E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.7E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 PIRSF PIRSF005499 1 705 7.5E-294 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 29.979 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF54211 3 143 2.02E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF00013 KH domain 557 613 9.0E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF55666 144 235 4.77E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Gene3D G3DSA:3.30.230.70 233 548 5.6E-115 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF55666 450 544 2.52E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Gene3D G3DSA:2.40.50.140 621 692 5.5E-26 T 11-10-2018 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF54211 291 488 3.44E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0693 d0721d3626f993215de673f15d582f34 706 SMART SM00316 619 689 4.8E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF54791 554 639 1.29E-21 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tbd_0693 d0721d3626f993215de673f15d582f34 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Gene3D G3DSA:3.30.1370.10 549 620 1.8E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SUPERFAMILY SSF50249 619 696 1.09E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 3.8E-20 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 5.5E-13 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 3.8E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Pfam PF00575 S1 RNA binding domain 618 689 5.7E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_0693 d0721d3626f993215de673f15d582f34 706 Gene3D G3DSA:3.30.230.70 1 228 6.7E-80 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tbd_0693 d0721d3626f993215de673f15d582f34 706 SMART SM00322 551 616 2.7E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Tbd_1755 5051adeb21d70660a1ad1411201068c4 144 SUPERFAMILY SSF55961 1 143 2.16E-34 T 11-10-2018 Tbd_1755 5051adeb21d70660a1ad1411201068c4 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.5E-26 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Tbd_1755 5051adeb21d70660a1ad1411201068c4 144 Gene3D G3DSA:3.30.530.20 1 144 1.0E-32 T 11-10-2018 IPR023393 START-like domain superfamily Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.5E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 SMART SM00448 8 119 1.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 SMART SM00421 143 200 3.3E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.3E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 Gene3D G3DSA:3.40.50.2300 4 135 1.7E-48 T 11-10-2018 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 SUPERFAMILY SSF46894 140 202 2.59E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 Gene3D G3DSA:1.10.10.10 136 203 2.5E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 Pfam PF00072 Response regulator receiver domain 10 119 5.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1743 8939a494edd3cb7157d3f87d1304f0c8 209 SUPERFAMILY SSF52172 10 159 1.57E-32 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SUPERFAMILY SSF55073 289 440 2.35E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SMART SM00267 273 442 1.1E-58 T 11-10-2018 IPR000160 GGDEF domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SUPERFAMILY SSF54631 6 121 8.61E-15 T 11-10-2018 Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SUPERFAMILY SSF54631 133 250 2.79E-18 T 11-10-2018 Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Gene3D G3DSA:3.10.580.10 138 254 1.2E-17 T 11-10-2018 Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 438 8.4E-44 T 11-10-2018 IPR000160 GGDEF domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Pfam PF00571 CBS domain 76 122 0.0022 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Pfam PF00571 CBS domain 7 58 6.8E-5 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Pfam PF00571 CBS domain 199 249 8.9E-8 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Gene3D G3DSA:3.30.70.270 271 442 3.4E-53 T 11-10-2018 Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SMART SM00116 13 60 15.0 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SMART SM00116 76 123 6.5 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SMART SM00116 141 187 0.097 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 SMART SM00116 203 252 1.1E-4 T 11-10-2018 IPR000644 CBS domain Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 Gene3D G3DSA:3.10.580.10 2 137 1.6E-15 T 11-10-2018 Tbd_1953 582505f76efbc52fbb7f973cb51a0fc8 454 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 280 441 1.0E-44 T 11-10-2018 IPR000160 GGDEF domain Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 Gene3D G3DSA:2.70.70.10 179 306 2.5E-31 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 Gene3D G3DSA:3.10.350.10 50 100 1.8E-10 T 11-10-2018 IPR036779 LysM domain superfamily Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 Pfam PF01476 LysM domain 54 96 2.9E-9 T 11-10-2018 IPR018392 LysM domain Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 SUPERFAMILY SSF51261 54 305 3.66E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 SMART SM00257 53 97 8.5E-7 T 11-10-2018 IPR018392 LysM domain Tbd_0837 c2bfd85bd3df209b8f62233dffb163fe 309 Pfam PF01551 Peptidase family M23 209 301 3.7E-26 T 11-10-2018 IPR016047 Peptidase M23 Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 Pfam PF02754 Cysteine-rich domain 304 389 3.0E-12 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 Pfam PF02754 Cysteine-rich domain 171 254 4.4E-11 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 Gene3D G3DSA:1.10.1060.10 6 106 1.0E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 PIRSF PIRSF000139 7 410 7.2E-116 T 11-10-2018 Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 SUPERFAMILY SSF54862 17 106 1.67E-19 T 11-10-2018 Tbd_0044 ac00212ff0f300380d3af20e18929bf8 410 Pfam PF12838 4Fe-4S dicluster domain 25 89 2.0E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 341 2.7E-56 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 SUPERFAMILY SSF51905 3 350 5.76E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 7.4E-8 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.4E-8 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 7.4E-8 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 2.2E-13 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 2.2E-13 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 2.2E-13 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-13 T 11-10-2018 Tbd_2220 118678f2a9d737a18f3a54f9c57f8f75 437 Gene3D G3DSA:3.50.50.100 1 415 1.9E-112 T 11-10-2018 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 SUPERFAMILY SSF52540 1 185 9.24E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1504 ae9691908297c63002a50b7389c42a53 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 53.295 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.5E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 PRINTS PR00094 Adenylate kinase signature 156 171 1.5E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 PRINTS PR00094 Adenylate kinase signature 173 187 1.5E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.5E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.5E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 Gene3D G3DSA:3.40.50.300 1 216 4.4E-77 T 11-10-2018 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.9E-16 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 Pfam PF00406 Adenylate kinase 5 184 3.5E-57 T 11-10-2018 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tbd_1504 ae9691908297c63002a50b7389c42a53 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 186 1.9E-73 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 140 2.5E-35 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 Pfam PF03652 Holliday junction resolvase 9 140 1.4E-39 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 SMART SM00732 8 108 2.3E-25 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 22.569 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 SUPERFAMILY SSF53098 8 140 9.1E-38 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_2580 eb5f10ed52d565db1144b6680d2f4ee8 145 Gene3D G3DSA:3.30.420.140 6 142 1.8E-40 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 Pfam PF12849 PBP superfamily domain 24 308 4.7E-55 T 11-10-2018 IPR024370 PBP domain Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 PIRSF PIRSF002756 1 339 1.2E-104 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 Gene3D G3DSA:3.40.190.10 103 280 1.7E-115 T 11-10-2018 Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 SUPERFAMILY SSF53850 29 338 1.13E-89 T 11-10-2018 Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 336 3.7E-113 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Tbd_1136 6b31d6c39fe6457d1773fb6f89e45a43 339 Gene3D G3DSA:3.40.190.10 29 328 1.7E-115 T 11-10-2018 Tbd_0876 d056a682fed49184471084cb2b10e3ed 236 SUPERFAMILY SSF52317 5 232 5.2E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0876 d056a682fed49184471084cb2b10e3ed 236 Gene3D G3DSA:3.40.50.880 1 236 1.4E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0876 d056a682fed49184471084cb2b10e3ed 236 Pfam PF00117 Glutamine amidotransferase class-I 31 179 4.1E-12 T 11-10-2018 IPR017926 Glutamine amidotransferase Tbd_0700 4f3a76b8b7d9ea424382f1bb7e8df2d6 188 PIRSF PIRSF000847 1 188 7.2E-43 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tbd_0700 4f3a76b8b7d9ea424382f1bb7e8df2d6 188 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_0700 4f3a76b8b7d9ea424382f1bb7e8df2d6 188 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 7.9E-18 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_0700 4f3a76b8b7d9ea424382f1bb7e8df2d6 188 Gene3D G3DSA:1.20.120.1760 4 184 6.0E-16 T 11-10-2018 Tbd_0700 4f3a76b8b7d9ea424382f1bb7e8df2d6 188 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 7.5E-51 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 Pfam PF00072 Response regulator receiver domain 3 112 5.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 SMART SM00448 1 112 2.1E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 SMART SM00862 145 216 8.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 Gene3D G3DSA:3.40.50.2300 1 121 3.8E-39 T 11-10-2018 Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 Gene3D G3DSA:1.10.10.10 123 220 1.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2791 6b90e7f8e17a2214e3f6afedd8439915 221 SUPERFAMILY SSF52172 1 174 6.74E-38 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2142 39ec305c1d6d58d8b54fe38734ecea63 163 SUPERFAMILY SSF52833 21 156 3.18E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2142 39ec305c1d6d58d8b54fe38734ecea63 163 Pfam PF13899 Thioredoxin-like 31 98 6.0E-10 T 11-10-2018 Tbd_2142 39ec305c1d6d58d8b54fe38734ecea63 163 Gene3D G3DSA:3.40.30.10 28 163 1.7E-25 T 11-10-2018 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 279 2.5E-35 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01182 Ornithine decarboxylase signature 364 377 2.0E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01182 Ornithine decarboxylase signature 93 117 2.0E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01182 Ornithine decarboxylase signature 50 77 2.0E-7 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 Gene3D G3DSA:3.20.20.10 33 260 2.4E-50 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 SUPERFAMILY SSF51419 29 282 4.65E-69 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 SUPERFAMILY SSF50621 244 398 4.4E-32 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 72 84 1.0E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 269 288 1.0E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 184 197 1.0E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 52 70 1.0E-8 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 Gene3D G3DSA:2.40.37.10 261 400 2.9E-41 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_0717 46d1dd85a8e96730da8c965c0fcc8bbe 402 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 377 8.9E-12 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Tbd_2092 0b169e40fd80513032dd56075ecae0a0 144 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 9 123 1.4E-21 T 11-10-2018 Tbd_2092 0b169e40fd80513032dd56075ecae0a0 144 PIRSF PIRSF004923 1 140 4.4E-23 T 11-10-2018 IPR026268 Protein RseC Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 Pfam PF04542 Sigma-70 region 2 9 71 2.0E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 Gene3D G3DSA:1.10.1740.10 1 65 9.3E-26 T 11-10-2018 Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 3.7E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 Pfam PF08281 Sigma-70, region 4 97 149 4.4E-18 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 Gene3D G3DSA:1.10.10.10 91 155 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 SUPERFAMILY SSF88659 94 153 1.81E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1654 0d4f405d1afbb249b77dd6426ca7b036 165 SUPERFAMILY SSF88946 8 79 1.18E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 50 460 6.4E-136 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 SUPERFAMILY SSF51735 136 262 8.66E-10 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 Pfam PF13727 CoA-binding domain 74 234 2.3E-24 T 11-10-2018 Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 67 460 4.1E-150 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 Gene3D G3DSA:3.40.50.720 135 257 1.5E-16 T 11-10-2018 Tbd_1801 a943d4c67f5a911021f7e200cb3ed376 460 Pfam PF02397 Bacterial sugar transferase 270 454 3.3E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 PIRSF PIRSF005902 1 256 8.9E-58 T 11-10-2018 IPR001130 TatD family GO:0016788 Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 SUPERFAMILY SSF51556 4 251 1.61E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 Gene3D G3DSA:3.20.20.140 1 253 3.0E-69 T 11-10-2018 Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 Pfam PF01026 TatD related DNase 5 250 8.2E-56 T 11-10-2018 IPR001130 TatD family GO:0016788 Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tbd_0488 6be9988bd19fff86367ec1684b89a877 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 4 12 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 SUPERFAMILY SSF53067 101 307 2.62E-40 T 11-10-2018 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 304 2.8E-108 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 311 2.7E-127 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 SUPERFAMILY SSF53067 3 121 1.68E-26 T 11-10-2018 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 Gene3D G3DSA:3.30.420.40 3 312 3.1E-119 T 11-10-2018 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 334 60.574 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 Gene3D G3DSA:3.30.420.40 129 291 3.1E-119 T 11-10-2018 Tbd_2384 e2b16435b494c72bb190f0fc714b93a3 341 Pfam PF00814 Glycoprotease family 24 305 1.5E-96 T 11-10-2018 IPR000905 Gcp-like domain Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 219 241 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 2.1E-33 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 263 2.1E-80 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 263 26.58 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 Gene3D G3DSA:1.10.3730.10 161 267 2.3E-39 T 11-10-2018 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 95 7.9E-16 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 SUPERFAMILY SSF48179 158 266 4.59E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 Gene3D G3DSA:3.40.50.720 1 160 1.4E-44 T 11-10-2018 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 PIRSF PIRSF000193 1 266 5.9E-72 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tbd_2417 4b8407a6922a3768d2a699956ca3b53d 271 SUPERFAMILY SSF51735 3 157 1.84E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2766 1acf05e77f0c6a127a7437ee689cd993 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 273 4.9E-11 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tbd_2766 1acf05e77f0c6a127a7437ee689cd993 281 SUPERFAMILY SSF56219 1 281 1.05E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_2766 1acf05e77f0c6a127a7437ee689cd993 281 Gene3D G3DSA:3.60.10.10 1 281 3.3E-48 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_1558 eb1d79840248d40068a22fca9f4c956a 233 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 47 209 5.1E-9 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tbd_1558 eb1d79840248d40068a22fca9f4c956a 233 Gene3D G3DSA:3.30.950.10 121 233 1.5E-36 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tbd_1558 eb1d79840248d40068a22fca9f4c956a 233 Gene3D G3DSA:3.40.1010.10 1 120 2.3E-41 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tbd_1558 eb1d79840248d40068a22fca9f4c956a 233 SUPERFAMILY SSF53790 3 221 1.7E-62 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tbd_1558 eb1d79840248d40068a22fca9f4c956a 233 PIRSF PIRSF005917 1 229 2.6E-46 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 SUPERFAMILY SSF111337 5 335 3.79E-126 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 Gene3D G3DSA:2.40.10.240 63 158 1.2E-108 T 11-10-2018 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 Pfam PF02547 Queuosine biosynthesis protein 4 335 5.2E-128 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 336 44.423 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 Gene3D G3DSA:3.40.1780.10 14 334 1.2E-108 T 11-10-2018 Tbd_2074 f0edd5bcdd5cf58c01e2e77c2adcfb11 344 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 335 2.4E-121 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tbd_0493 efe373e3366031b161aee8bd6c28f3d1 89 PIRSF PIRSF028784 1 89 3.6E-27 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Tbd_0493 efe373e3366031b161aee8bd6c28f3d1 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 2.1E-22 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Tbd_2718 137e9909074454a59e58913512bdb509 202 PIRSF PIRSF015617 6 202 1.9E-64 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tbd_2718 137e9909074454a59e58913512bdb509 202 SUPERFAMILY SSF52540 13 201 3.78E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2718 137e9909074454a59e58913512bdb509 202 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 3.6E-8 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 Tbd_2718 137e9909074454a59e58913512bdb509 202 Gene3D G3DSA:3.40.50.300 11 202 7.9E-64 T 11-10-2018 Tbd_2718 137e9909074454a59e58913512bdb509 202 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 201 9.2E-63 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tbd_2718 137e9909074454a59e58913512bdb509 202 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 201 6.8E-57 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 51.031 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 Gene3D G3DSA:1.10.645.20 4 417 5.0E-178 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 3.3E-189 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.4E-127 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1145 b4c1790bb1f89f06cb26cf81ccae8e58 417 SUPERFAMILY SSF56762 16 417 2.75E-142 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1784 db8b5db4904f088a5c83b300d2940ad5 401 Gene3D G3DSA:3.40.50.2000 222 379 9.0E-38 T 11-10-2018 Tbd_1784 db8b5db4904f088a5c83b300d2940ad5 401 Pfam PF13439 Glycosyltransferase Family 4 14 215 9.8E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_1784 db8b5db4904f088a5c83b300d2940ad5 401 Pfam PF00534 Glycosyl transferases group 1 226 376 4.7E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_1784 db8b5db4904f088a5c83b300d2940ad5 401 SUPERFAMILY SSF53756 1 398 1.65E-74 T 11-10-2018 Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 Pfam PF05726 Pirin C-terminal cupin domain 175 275 1.4E-33 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 SUPERFAMILY SSF51182 3 278 1.38E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 Pfam PF02678 Pirin 21 121 2.2E-35 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 Gene3D G3DSA:2.60.120.10 17 271 1.4E-99 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 PIRSF PIRSF006232 2 283 4.9E-101 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Tbd_1112 9e0b1785421e3ca7ef79632b9ba25c90 285 Gene3D G3DSA:2.60.120.10 143 245 1.4E-99 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1528 4adbd87b5f4d6afc947c50137219a484 287 Gene3D G3DSA:3.20.20.140 4 250 1.3E-81 T 11-10-2018 Tbd_1528 4adbd87b5f4d6afc947c50137219a484 287 SMART SM00481 4 69 7.8E-21 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tbd_1528 4adbd87b5f4d6afc947c50137219a484 287 Gene3D G3DSA:1.10.150.650 97 169 1.3E-81 T 11-10-2018 Tbd_1528 4adbd87b5f4d6afc947c50137219a484 287 SUPERFAMILY SSF89550 1 277 1.26E-47 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tbd_1528 4adbd87b5f4d6afc947c50137219a484 287 Pfam PF02811 PHP domain 5 119 7.9E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 Tbd_0289 f2c59ba4589de8c5c3367d47b32df40e 406 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 394 1.4E-180 T 11-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 Tbd_0289 f2c59ba4589de8c5c3367d47b32df40e 406 Gene3D G3DSA:3.40.50.2000 133 223 2.8E-5 T 11-10-2018 Tbd_0289 f2c59ba4589de8c5c3367d47b32df40e 406 Gene3D G3DSA:3.40.50.2000 224 353 2.5E-12 T 11-10-2018 Tbd_0289 f2c59ba4589de8c5c3367d47b32df40e 406 SUPERFAMILY SSF53756 16 390 2.15E-21 T 11-10-2018 Tbd_0289 f2c59ba4589de8c5c3367d47b32df40e 406 Pfam PF13692 Glycosyl transferases group 1 228 339 1.8E-25 T 11-10-2018 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 Gene3D G3DSA:3.90.1150.10 7 417 1.3E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 SUPERFAMILY SSF53383 2 423 7.83E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 3.8E-186 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 Gene3D G3DSA:3.40.640.10 69 317 1.3E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 101.893 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Tbd_2557 7c3737c2819b50cd85d713b08f639298 425 Pfam PF00202 Aminotransferase class-III 32 394 1.8E-72 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 SMART SM00962 100 295 1.4E-118 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Pfam PF02978 Signal peptide binding domain 328 424 4.4E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 SMART SM00382 99 269 5.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 436 33.97 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Gene3D G3DSA:1.20.120.140 5 305 9.9E-126 T 11-10-2018 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 SMART SM00963 1 86 5.6E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 SUPERFAMILY SSF52540 42 351 4.5E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 SUPERFAMILY SSF47446 297 428 1.57E-44 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 5.3E-75 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 426 4.2E-179 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.2E-20 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Gene3D G3DSA:3.40.50.300 90 284 9.9E-126 T 11-10-2018 Tbd_2373 bc4aa8426c8ef29f25acc9bafabb6310 447 Gene3D G3DSA:1.10.260.30 327 446 1.6E-41 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tbd_2659 40394359be5ea0157f7220457121962e 161 Gene3D G3DSA:2.60.120.10 46 153 5.8E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_2659 40394359be5ea0157f7220457121962e 161 Pfam PF07883 Cupin domain 76 139 4.6E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel Tbd_2659 40394359be5ea0157f7220457121962e 161 SUPERFAMILY SSF51182 42 145 2.89E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PIRSF PIRSF002133 1 124 1.1E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 Gene3D G3DSA:2.40.50.140 1 125 2.8E-63 T 11-10-2018 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.0E-69 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.754 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 SUPERFAMILY SSF50249 2 124 7.45E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.6E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0400 6dbbb10dc775a2273c3ecaff882f3e91 125 Pfam PF00164 Ribosomal protein S12/S23 14 123 3.0E-41 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 Gene3D G3DSA:1.25.40.10 33 185 2.4E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 SMART SM00028 130 158 250.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 SMART SM00028 96 129 1.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 SMART SM00028 62 95 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 SUPERFAMILY SSF54427 212 316 7.57E-16 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 Gene3D G3DSA:3.10.450.50 208 318 1.2E-11 T 11-10-2018 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 SUPERFAMILY SSF48452 37 168 7.36E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1903 da7cae7920e228f0bf11a00dc5d6cfe0 319 Pfam PF14559 Tetratricopeptide repeat 74 133 1.6E-5 T 11-10-2018 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 SUPERFAMILY SSF53597 8 167 3.23E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 Gene3D G3DSA:3.40.430.10 4 167 5.1E-59 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 PRINTS PR00070 Dihydrofolate reductase signature 20 30 1.7E-14 T 11-10-2018 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 PRINTS PR00070 Dihydrofolate reductase signature 34 42 1.7E-14 T 11-10-2018 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 PRINTS PR00070 Dihydrofolate reductase signature 47 58 1.7E-14 T 11-10-2018 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 PRINTS PR00070 Dihydrofolate reductase signature 98 112 1.7E-14 T 11-10-2018 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 Pfam PF00186 Dihydrofolate reductase 9 166 6.8E-60 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 20 42 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Tbd_2039 fe19be1e290578f4b07687e78d0421f6 167 PIRSF PIRSF000194 4 167 5.8E-64 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Tbd_0510 baf5733f05263bb8a12f0a25bd8caa80 1261 Pfam PF13502 AsmA-like C-terminal region 1002 1242 2.9E-54 T 11-10-2018 IPR032712 AsmA-like, C-terminal Tbd_0510 baf5733f05263bb8a12f0a25bd8caa80 1261 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 19 1251 2.3E-236 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 Tbd_0510 baf5733f05263bb8a12f0a25bd8caa80 1261 Pfam PF13116 Protein of unknown function 521 787 1.5E-57 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SMART SM00052 443 693 1.4E-57 T 11-10-2018 IPR001633 EAL domain Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Gene3D G3DSA:1.20.1480.50 164 259 7.5E-13 T 11-10-2018 Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SUPERFAMILY SSF55073 275 432 1.49E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SMART SM00267 259 431 2.7E-52 T 11-10-2018 IPR000160 GGDEF domain Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SUPERFAMILY SSF158472 201 251 3.66E-9 T 11-10-2018 Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Gene3D G3DSA:3.20.20.450 432 694 2.7E-75 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SUPERFAMILY SSF141868 449 695 9.29E-67 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Pfam PF00563 EAL domain 450 688 2.8E-58 T 11-10-2018 IPR001633 EAL domain Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Gene3D G3DSA:3.30.70.270 260 431 1.2E-54 T 11-10-2018 Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Pfam PF00672 HAMP domain 201 250 9.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Pfam PF00990 Diguanylate cyclase, GGDEF domain 270 427 5.3E-41 T 11-10-2018 IPR000160 GGDEF domain Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 175 1.1E-13 T 11-10-2018 IPR019247 Histidine kinase BarA, N-terminal Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 5.8E-41 T 11-10-2018 IPR000160 GGDEF domain Tbd_1660 ac71d6378056a8916310cf2b5ef14b03 698 SMART SM00304 201 253 1.4E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 Gene3D G3DSA:1.10.287.470 91 164 1.1E-79 T 11-10-2018 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 Gene3D G3DSA:2.40.420.20 42 351 1.1E-79 T 11-10-2018 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 272 2.9E-27 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 Gene3D G3DSA:2.40.30.170 44 279 1.1E-79 T 11-10-2018 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 Gene3D G3DSA:2.40.50.100 57 203 1.1E-79 T 11-10-2018 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 353 6.2E-84 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_2532 b84d71a296c287969a1113c9ab00a923 359 SUPERFAMILY SSF111369 48 275 5.62E-28 T 11-10-2018 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 240 61.311 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Pfam PF04545 Sigma-70, region 4 187 235 9.3E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 238 3.0E-83 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 SUPERFAMILY SSF88946 11 88 8.63E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 PRINTS PR00046 Major sigma-70 factor signature 222 233 1.1E-10 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 PRINTS PR00046 Major sigma-70 factor signature 43 56 1.1E-10 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 PRINTS PR00046 Major sigma-70 factor signature 190 202 1.1E-10 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 PRINTS PR00046 Major sigma-70 factor signature 207 222 1.1E-10 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Gene3D G3DSA:1.10.1740.10 3 85 1.1E-30 T 11-10-2018 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 SUPERFAMILY SSF88659 89 161 1.61E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 SUPERFAMILY SSF88659 152 239 3.92E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 237 1.0E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Pfam PF04542 Sigma-70 region 2 16 88 2.1E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 PIRSF PIRSF000770 2 242 2.3E-40 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Gene3D G3DSA:1.20.140.160 87 240 2.5E-44 T 11-10-2018 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 Pfam PF04539 Sigma-70 region 3 97 156 7.3E-12 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tbd_1249 3caab2a171e0d8b0c7183045fe35e30a 246 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 207 233 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tbd_2009 2d1de3a1346c7019d456db66941355b7 227 Gene3D G3DSA:1.10.1760.20 10 213 5.1E-10 T 11-10-2018 Tbd_2009 2d1de3a1346c7019d456db66941355b7 227 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 20 214 2.4E-18 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 SUPERFAMILY SSF56954 3 468 1.16E-104 T 11-10-2018 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 Pfam PF02321 Outer membrane efflux protein 284 464 5.5E-25 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 Pfam PF02321 Outer membrane efflux protein 67 255 1.7E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 467 6.2E-125 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 Gene3D G3DSA:1.20.1600.10 57 467 9.9E-135 T 11-10-2018 Tbd_1416 1b7e2ccd061f37ffcd0d8535221e3611 469 Gene3D G3DSA:2.20.200.10 103 356 9.9E-135 T 11-10-2018 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 SUPERFAMILY SSF63380 102 198 3.23E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 6.5E-21 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Gene3D G3DSA:3.40.50.80 200 336 7.7E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 81 2.5E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 4.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 4.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 4.4E-5 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 3.0E-25 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Gene3D G3DSA:3.10.20.30 1 98 5.2E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 SUPERFAMILY SSF52343 200 335 5.76E-39 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 SUPERFAMILY SSF54292 1 89 4.85E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Gene3D G3DSA:2.40.30.10 101 199 2.0E-28 T 11-10-2018 Tbd_2563 030aac72afdf11e3198e7d1f8d229546 345 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 1.1E-17 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tbd_2783 a16e177b05b6c23e02423dae80d40ec1 176 Pfam PF05036 Sporulation related domain 95 166 1.0E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tbd_2783 a16e177b05b6c23e02423dae80d40ec1 176 SUPERFAMILY SSF110997 94 167 3.27E-17 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_2783 a16e177b05b6c23e02423dae80d40ec1 176 Gene3D G3DSA:3.30.70.1070 90 168 5.8E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_1692 c189ca04cb36cb5056097c38ecfcec2c 322 SMART SM00382 116 248 2.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1692 c189ca04cb36cb5056097c38ecfcec2c 322 SUPERFAMILY SSF52540 76 315 2.09E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1692 c189ca04cb36cb5056097c38ecfcec2c 322 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 120 243 4.2E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1692 c189ca04cb36cb5056097c38ecfcec2c 322 Gene3D G3DSA:3.40.50.300 71 264 1.3E-44 T 11-10-2018 Tbd_0573 032bc8aba46c5c39a14dfb5a5324324c 109 Gene3D G3DSA:3.40.250.10 13 107 7.1E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0573 032bc8aba46c5c39a14dfb5a5324324c 109 Pfam PF00581 Rhodanese-like domain 16 100 4.8E-16 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0573 032bc8aba46c5c39a14dfb5a5324324c 109 SUPERFAMILY SSF52821 6 105 1.31E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0573 032bc8aba46c5c39a14dfb5a5324324c 109 SMART SM00450 10 104 2.9E-23 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2423 1374db24bb995489ed207339283adafe 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 43 7.8E-8 T 11-10-2018 Tbd_2423 1374db24bb995489ed207339283adafe 82 Gene3D G3DSA:3.40.1620.10 1 39 3.8E-9 T 11-10-2018 Tbd_2423 1374db24bb995489ed207339283adafe 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 41 3.5E-9 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tbd_2423 1374db24bb995489ed207339283adafe 82 SUPERFAMILY SSF143120 1 44 1.01E-9 T 11-10-2018 IPR036165 YefM-like superfamily Tbd_1103 74c74a906a6ed643c825681a95c783cb 312 Pfam PF00753 Metallo-beta-lactamase superfamily 58 241 7.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1103 74c74a906a6ed643c825681a95c783cb 312 SUPERFAMILY SSF56281 6 296 6.3E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1103 74c74a906a6ed643c825681a95c783cb 312 Gene3D G3DSA:3.60.15.10 28 267 1.8E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1103 74c74a906a6ed643c825681a95c783cb 312 SMART SM00849 54 241 5.6E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0614 4c1b32a7f83835f1cce82f4f7da2fa99 325 Gene3D G3DSA:3.40.50.2000 127 296 7.3E-18 T 11-10-2018 Tbd_0614 4c1b32a7f83835f1cce82f4f7da2fa99 325 TIGRFAM TIGR04348 TIGR04348: putative glycosyltransferase, TIGR04348 family 3 312 5.7E-141 T 11-10-2018 IPR027627 Putative glycosyltransferase Tbd_0614 4c1b32a7f83835f1cce82f4f7da2fa99 325 SUPERFAMILY SSF53756 1 311 2.29E-28 T 11-10-2018 Tbd_0614 4c1b32a7f83835f1cce82f4f7da2fa99 325 Pfam PF00534 Glycosyl transferases group 1 143 294 4.3E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Gene3D G3DSA:3.40.50.300 22 186 4.9E-103 T 11-10-2018 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Gene3D G3DSA:3.30.300.150 449 561 2.2E-13 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 SUPERFAMILY SSF52540 41 231 9.16E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 SUPERFAMILY SSF48019 252 372 9.35E-30 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Gene3D G3DSA:1.10.8.60 17 249 4.9E-103 T 11-10-2018 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 13 363 5.5E-129 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 241 372 2.3E-26 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 SMART SM00382 46 188 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Gene3D G3DSA:1.20.272.10 251 369 5.1E-36 T 11-10-2018 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Pfam PF13177 DNA polymerase III, delta subunit 29 187 6.1E-44 T 11-10-2018 Tbd_0515 067e0f41d652e3e2eb2e2b4b9517bc0a 581 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 456 576 3.2E-15 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:3.40.50.12740 1835 1958 2.1E-37 T 11-10-2018 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF52172 1833 1953 1.57E-35 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF47226 442 556 4.56E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF01627 Hpt domain 1017 1105 5.6E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF01627 Hpt domain 23 104 3.2E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF01627 Hpt domain 1205 1298 1.9E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF01627 Hpt domain 748 847 5.4E-16 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:3.30.565.10 1487 1673 4.4E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:2.40.50.180 1697 1761 1.8E-30 T 11-10-2018 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF47226 747 868 1.96E-26 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:1.20.120.160 1203 1317 1.4E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00448 1835 1948 9.8E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM01231 1352 1488 1.6E-9 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00073 1202 1300 2.5E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00073 1014 1112 0.29 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00073 746 843 4.7E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF55874 1490 1672 8.51E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF47226 1202 1325 4.32E-26 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF00072 Response regulator receiver domain 1837 1948 1.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1634 1652 6.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1658 1671 6.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1578 1592 6.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:2.30.30.40 1674 1801 1.8E-30 T 11-10-2018 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1537 1673 4.9E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00260 1666 1806 1.6E-18 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF50341 1673 1804 2.35E-25 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF47226 11 131 3.27E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SUPERFAMILY SSF47226 1016 1133 3.66E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Pfam PF01584 CheW-like domain 1678 1803 5.8E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 SMART SM00387 1533 1674 1.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:1.20.120.160 743 868 5.6E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_2548 ec2f104fe3750da32700143abb5806e9 1960 Gene3D G3DSA:1.20.120.160 1014 1147 4.8E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tbd_0255 94f71c17ff4b2f4d30c481eec3b9df6b 212 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 212 32.814 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0255 94f71c17ff4b2f4d30c481eec3b9df6b 212 Gene3D G3DSA:3.40.50.2020 1 212 4.8E-71 T 11-10-2018 Tbd_0255 94f71c17ff4b2f4d30c481eec3b9df6b 212 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 185 2.1E-55 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_0255 94f71c17ff4b2f4d30c481eec3b9df6b 212 SUPERFAMILY SSF53271 2 210 3.83E-47 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_0255 94f71c17ff4b2f4d30c481eec3b9df6b 212 Pfam PF00156 Phosphoribosyl transferase domain 41 166 3.8E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_2139 89bcccff6d4c55e572d25dae9815e8aa 364 Pfam PF00534 Glycosyl transferases group 1 171 334 2.9E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_2139 89bcccff6d4c55e572d25dae9815e8aa 364 SUPERFAMILY SSF53756 12 357 7.33E-69 T 11-10-2018 Tbd_2139 89bcccff6d4c55e572d25dae9815e8aa 364 Gene3D G3DSA:3.40.50.2000 156 341 1.7E-56 T 11-10-2018 Tbd_2139 89bcccff6d4c55e572d25dae9815e8aa 364 Gene3D G3DSA:3.40.50.2000 19 350 1.7E-56 T 11-10-2018 Tbd_2139 89bcccff6d4c55e572d25dae9815e8aa 364 Pfam PF13439 Glycosyltransferase Family 4 19 158 1.4E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_1838 6fed811c032f7d55f6a1d2d5cac6b3e2 430 SUPERFAMILY SSF56935 85 430 2.93E-16 T 11-10-2018 Tbd_1838 6fed811c032f7d55f6a1d2d5cac6b3e2 430 Gene3D G3DSA:2.40.160.10 64 414 6.0E-12 T 11-10-2018 IPR023614 Porin domain superfamily Tbd_1838 6fed811c032f7d55f6a1d2d5cac6b3e2 430 Pfam PF07396 Phosphate-selective porin O and P 285 393 2.0E-7 T 11-10-2018 IPR010870 Phosphate-selective porin O/P Tbd_1783 f13b2ecdb17c05876a4426cf3c684515 341 Gene3D G3DSA:3.90.550.10 3 255 2.4E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1783 f13b2ecdb17c05876a4426cf3c684515 341 Pfam PF00535 Glycosyl transferase family 2 20 181 1.8E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_1783 f13b2ecdb17c05876a4426cf3c684515 341 SUPERFAMILY SSF53448 17 235 2.18E-51 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0145 7d50377646539f699a4c9e89e262099a 249 SUPERFAMILY SSF81901 88 204 9.55E-29 T 11-10-2018 Tbd_0145 7d50377646539f699a4c9e89e262099a 249 SMART SM00671 130 165 6.8E-6 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 SMART SM00671 166 201 2.3E-8 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 SMART SM00671 94 129 8.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 Pfam PF08238 Sel1 repeat 94 128 6.0E-7 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 Pfam PF08238 Sel1 repeat 130 164 1.4E-5 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 Pfam PF08238 Sel1 repeat 166 200 1.5E-5 T 11-10-2018 IPR006597 Sel1-like repeat Tbd_0145 7d50377646539f699a4c9e89e262099a 249 Gene3D G3DSA:1.25.40.10 65 234 8.7E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0504 115871b56a93279e44e93a771670eae2 655 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 7.7E-22 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Tbd_0504 115871b56a93279e44e93a771670eae2 655 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 11-10-2018 IPR020845 AMP-binding, conserved site Tbd_0504 115871b56a93279e44e93a771670eae2 655 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 654 53.346 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Tbd_0504 115871b56a93279e44e93a771670eae2 655 Gene3D G3DSA:3.30.300.30 525 655 2.8E-29 T 11-10-2018 Tbd_0504 115871b56a93279e44e93a771670eae2 655 Pfam PF13193 AMP-binding enzyme C-terminal domain 538 619 6.7E-28 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Tbd_0504 115871b56a93279e44e93a771670eae2 655 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 652 1.5E-299 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Tbd_0504 115871b56a93279e44e93a771670eae2 655 Gene3D G3DSA:3.40.50.12780 60 522 1.1E-110 T 11-10-2018 Tbd_0504 115871b56a93279e44e93a771670eae2 655 Pfam PF00501 AMP-binding enzyme 89 529 2.2E-98 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tbd_0504 115871b56a93279e44e93a771670eae2 655 SUPERFAMILY SSF56801 17 650 5.89E-178 T 11-10-2018 Tbd_2296 a49afa90f4f30396782a9e8f0b0b613c 155 Pfam PF06754 Phosphonate metabolism protein PhnG 4 145 1.5E-30 T 11-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2296 a49afa90f4f30396782a9e8f0b0b613c 155 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 4 149 8.9E-38 T 11-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_0623 4d59d27b3aa78dd4b8ca94852bc630f4 389 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 245 365 1.0E-18 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Tbd_0623 4d59d27b3aa78dd4b8ca94852bc630f4 389 SUPERFAMILY SSF64383 238 373 8.5E-31 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Tbd_0623 4d59d27b3aa78dd4b8ca94852bc630f4 389 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 242 364 1.6E-27 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Tbd_0623 4d59d27b3aa78dd4b8ca94852bc630f4 389 Gene3D G3DSA:3.30.1400.10 238 372 1.4E-19 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Tbd_0623 4d59d27b3aa78dd4b8ca94852bc630f4 389 SMART SM00771 239 365 8.0E-21 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Tbd_1949 18cdea28a7ae0329db71b4c0551f6dda 174 Pfam PF06210 Protein of unknown function (DUF1003) 46 144 5.3E-28 T 11-10-2018 IPR010406 Protein of unknown function DUF1003 Tbd_2808 b70db2895c286a48e92a341562827f81 632 SMART SM01228 546 617 6.2E-42 T 11-10-2018 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.5 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Pfam PF01134 Glucose inhibited division protein A 8 399 1.0E-164 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Gene3D G3DSA:1.10.150.570 569 621 2.0E-22 T 11-10-2018 Tbd_2808 b70db2895c286a48e92a341562827f81 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Pfam PF13932 GidA associated domain 403 616 2.2E-73 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Gene3D G3DSA:1.10.10.1800 459 550 3.0E-27 T 11-10-2018 Tbd_2808 b70db2895c286a48e92a341562827f81 632 SUPERFAMILY SSF51905 6 261 1.04E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2808 b70db2895c286a48e92a341562827f81 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 620 1.2E-266 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tbd_2808 b70db2895c286a48e92a341562827f81 632 Gene3D G3DSA:3.50.50.60 295 458 6.2E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2808 b70db2895c286a48e92a341562827f81 632 Gene3D G3DSA:3.50.50.60 2 220 1.9E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 Gene3D G3DSA:3.30.70.270 111 241 1.8E-35 T 11-10-2018 Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 108 230 1.3E-29 T 11-10-2018 IPR000160 GGDEF domain Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 SMART SM00267 98 238 1.5E-18 T 11-10-2018 IPR000160 GGDEF domain Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 Pfam PF00990 Diguanylate cyclase, GGDEF domain 111 238 4.6E-29 T 11-10-2018 IPR000160 GGDEF domain Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 Gene3D G3DSA:1.20.120.30 1 110 5.1E-21 T 11-10-2018 Tbd_1277 4867bcf1068bf2178a6f4c4241132b0e 241 SUPERFAMILY SSF55073 114 235 3.14E-29 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1727 05ad83297a78c576ec8ea68d48afbe64 137 SMART SM00910 33 131 4.1E-28 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 Tbd_1727 05ad83297a78c576ec8ea68d48afbe64 137 Gene3D G3DSA:3.30.70.2330 28 127 3.6E-24 T 11-10-2018 Tbd_1727 05ad83297a78c576ec8ea68d48afbe64 137 Pfam PF08797 HIRAN domain 38 131 9.7E-18 T 11-10-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 Tbd_0476 5d204a6d83e1da54a9bc3d23833ad571 302 SMART SM00331 7 243 1.5E-16 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_0476 5d204a6d83e1da54a9bc3d23833ad571 302 Pfam PF13672 Protein phosphatase 2C 8 206 3.3E-17 T 11-10-2018 Tbd_0476 5d204a6d83e1da54a9bc3d23833ad571 302 SUPERFAMILY SSF81606 1 242 7.46E-57 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_0476 5d204a6d83e1da54a9bc3d23833ad571 302 Gene3D G3DSA:3.60.40.10 1 243 2.7E-57 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_0476 5d204a6d83e1da54a9bc3d23833ad571 302 SMART SM00332 2 241 6.7E-15 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 Pfam PF01168 Alanine racemase, N-terminal domain 8 216 2.1E-65 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 Pfam PF00842 Alanine racemase, C-terminal domain 230 350 5.2E-42 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 Gene3D G3DSA:3.20.20.10 10 214 8.5E-116 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_2100 3819d871c0af575f58c99b33e359576d 367 SUPERFAMILY SSF50621 225 351 3.24E-46 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 SUPERFAMILY SSF51419 8 231 3.11E-66 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_2100 3819d871c0af575f58c99b33e359576d 367 Hamap MF_01201 Alanine racemase. 1 354 33.893 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 60 78 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 26 42 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 189 216 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 336 349 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 246 261 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 154 165 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 263 278 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 120 132 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 PRINTS PR00992 Alanine racemase signature 284 301 5.8E-68 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 Gene3D G3DSA:2.40.37.10 8 349 8.5E-116 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 TIGRFAM TIGR00492 alr: alanine racemase 3 351 4.5E-107 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_2100 3819d871c0af575f58c99b33e359576d 367 SMART SM01005 230 354 4.4E-67 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 Pfam PF09335 SNARE associated Golgi protein 548 663 3.6E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 SUPERFAMILY SSF56024 253 415 1.17E-23 T 11-10-2018 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 SUPERFAMILY SSF56024 15 243 1.49E-31 T 11-10-2018 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 Gene3D G3DSA:3.30.870.10 10 221 2.0E-23 T 11-10-2018 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 Gene3D G3DSA:3.30.870.10 249 412 4.6E-17 T 11-10-2018 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 Pfam PF00614 Phospholipase D Active site motif 133 156 5.7E-9 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 SMART SM00155 347 374 6.5E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 SMART SM00155 132 159 6.5E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_1474 916d67f7cc30e350b76f2ed36c10e2f4 714 Pfam PF13091 PLD-like domain 259 389 1.2E-10 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_2339 5596b29b092d4f6ad8cdf7a0f75ccb04 328 SUPERFAMILY SSF53659 3 322 2.88E-111 T 11-10-2018 Tbd_2339 5596b29b092d4f6ad8cdf7a0f75ccb04 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 324 36.683 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Tbd_2339 5596b29b092d4f6ad8cdf7a0f75ccb04 328 Gene3D G3DSA:3.40.718.10 2 324 5.5E-121 T 11-10-2018 Tbd_2339 5596b29b092d4f6ad8cdf7a0f75ccb04 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 321 6.5E-128 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Tbd_2339 5596b29b092d4f6ad8cdf7a0f75ccb04 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 317 6.8E-109 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Gene3D G3DSA:3.30.420.340 370 541 3.2E-48 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Pfam PF14520 Helix-hairpin-helix domain 546 597 1.3E-6 T 11-10-2018 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SUPERFAMILY SSF82771 14 97 1.57E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SMART SM00278 545 564 0.68 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SMART SM00278 577 596 160.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 378 531 2.5E-49 T 11-10-2018 IPR001162 UvrC family homology region Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 577 9.9E-181 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SUPERFAMILY SSF47781 511 598 6.99E-22 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SUPERFAMILY SSF46600 187 239 6.28E-12 T 11-10-2018 IPR036876 UVR domain superfamily Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Pfam PF01541 GIY-YIG catalytic domain 16 88 1.2E-8 T 11-10-2018 IPR000305 GIY-YIG endonuclease Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Gene3D G3DSA:1.10.150.20 544 598 9.1E-23 T 11-10-2018 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 SMART SM00465 14 95 5.3E-20 T 11-10-2018 IPR000305 GIY-YIG endonuclease Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Pfam PF02151 UvrB/uvrC motif 202 232 6.1E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 596 27.336 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Tbd_0701 e61ac910bd6bbdac4adf01632e7f422e 598 Gene3D G3DSA:3.40.1440.10 3 99 6.9E-31 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 228 97.388 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 203 9.8E-74 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 Gene3D G3DSA:2.30.210.20 5 59 4.0E-25 T 11-10-2018 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 Gene3D G3DSA:3.40.630.70 60 223 2.2E-67 T 11-10-2018 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 216 7.6E-60 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Tbd_2043 2240427da9635356f4fb2287d20fa806 228 SUPERFAMILY SSF55729 6 226 6.89E-91 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_1226 82466bde46220c5694357ba0c16bd307 422 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 227 3.2E-11 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 Gene3D G3DSA:3.30.420.40 1 224 1.9E-32 T 11-10-2018 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 SUPERFAMILY SSF53067 2 226 2.66E-29 T 11-10-2018 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 PIRSF PIRSF000538 1 421 1.4E-40 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 Gene3D G3DSA:3.30.420.40 225 421 1.4E-26 T 11-10-2018 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 SUPERFAMILY SSF53067 234 417 2.22E-18 T 11-10-2018 Tbd_1226 82466bde46220c5694357ba0c16bd307 422 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 242 411 2.2E-9 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Tbd_2381 b82866206dc9bb12df1ac6b5dfd9626f 120 SMART SM00905 4 116 5.4E-39 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tbd_2381 b82866206dc9bb12df1ac6b5dfd9626f 120 SUPERFAMILY SSF55620 1 117 1.72E-29 T 11-10-2018 Tbd_2381 b82866206dc9bb12df1ac6b5dfd9626f 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 4.5E-24 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tbd_2381 b82866206dc9bb12df1ac6b5dfd9626f 120 Gene3D G3DSA:3.30.1130.10 1 119 3.1E-33 T 11-10-2018 Tbd_2381 b82866206dc9bb12df1ac6b5dfd9626f 120 Pfam PF02152 Dihydroneopterin aldolase 4 115 2.4E-26 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tbd_0830 34c9fea349dbc31761265ba94b539930 228 Pfam PF03846 Cell division inhibitor SulA 46 134 7.7E-8 T 11-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 Tbd_0830 34c9fea349dbc31761265ba94b539930 228 Gene3D G3DSA:3.40.50.300 47 161 5.3E-42 T 11-10-2018 Tbd_0830 34c9fea349dbc31761265ba94b539930 228 SUPERFAMILY SSF52540 46 160 8.32E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0830 34c9fea349dbc31761265ba94b539930 228 PIRSF PIRSF037290 1 225 5.9E-72 T 11-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 68 311 1.2E-33 T 11-10-2018 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Gene3D G3DSA:3.40.190.10 153 273 2.7E-13 T 11-10-2018 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 SUPERFAMILY SSF47384 400 470 2.35E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Pfam PF00512 His Kinase A (phospho-acceptor) domain 405 473 5.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 571 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 585 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Gene3D G3DSA:3.40.190.10 77 304 2.7E-13 T 11-10-2018 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 SMART SM00388 404 474 7.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 626 7.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 SMART SM00387 516 627 1.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Gene3D G3DSA:1.10.287.130 410 471 1.5E-17 T 11-10-2018 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 SUPERFAMILY SSF53850 65 313 7.89E-11 T 11-10-2018 Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 Gene3D G3DSA:3.30.565.10 475 628 4.9E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1744 0945106e0e0df1c5fb5bc188cce8dc9c 630 SUPERFAMILY SSF55874 462 625 1.15E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1841 123078b5b68a54dbffe6315ce416f130 113 SUPERFAMILY SSF55248 22 111 2.09E-31 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_1841 123078b5b68a54dbffe6315ce416f130 113 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 20 111 19.742 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_1841 123078b5b68a54dbffe6315ce416f130 113 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 22 109 5.6E-29 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_1841 123078b5b68a54dbffe6315ce416f130 113 Gene3D G3DSA:3.30.1360.20 22 112 2.9E-29 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 147 162 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 SMART SM00382 81 224 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 Gene3D G3DSA:3.40.50.300 53 231 1.8E-62 T 11-10-2018 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 SUPERFAMILY SSF52540 61 292 4.58E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 Pfam PF02954 Bacterial regulatory protein, Fis family 322 363 3.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 329 346 3.0E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 346 366 3.0E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 Gene3D G3DSA:1.10.10.60 321 364 4.4E-13 T 11-10-2018 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 273 282 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 SUPERFAMILY SSF46689 273 363 6.4E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 Pfam PF00158 Sigma-54 interaction domain 62 227 1.7E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0730 86db0cd96fa11b21e0e7673444a967d4 388 Gene3D G3DSA:1.10.8.60 232 296 8.8E-22 T 11-10-2018 Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 245 34.11 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 SUPERFAMILY SSF52821 97 234 1.92E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 Pfam PF00581 Rhodanese-like domain 120 213 1.8E-5 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 Gene3D G3DSA:3.30.70.100 1 95 1.6E-31 T 11-10-2018 Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 SMART SM00450 118 219 4.4E-8 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_0683 2eaa1171e623d183848b5ff63a40fcd7 248 Gene3D G3DSA:3.40.250.10 96 243 1.4E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2151 17f98143b81048875dfed67243fb64b3 464 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 433 1.3E-114 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tbd_2151 17f98143b81048875dfed67243fb64b3 464 PIRSF PIRSF006066 4 439 2.2E-66 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tbd_2151 17f98143b81048875dfed67243fb64b3 464 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 435 1.3E-100 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 SUPERFAMILY SSF56655 1 263 1.83E-83 T 11-10-2018 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 Gene3D G3DSA:3.40.190.80 142 266 1.1E-36 T 11-10-2018 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 Gene3D G3DSA:3.30.540.10 1 141 2.2E-49 T 11-10-2018 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.9E-57 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 3.1E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 3.1E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 3.1E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.1E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Tbd_1160 0e53c25e0622e6d338c0ca8c83881106 268 Pfam PF00459 Inositol monophosphatase family 2 254 2.0E-59 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0267 118d0509483944ebb867ad5d1e254b27 282 Gene3D G3DSA:3.20.10.10 119 281 1.1E-54 T 11-10-2018 Tbd_0267 118d0509483944ebb867ad5d1e254b27 282 Pfam PF01063 Amino-transferase class IV 29 248 1.4E-48 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tbd_0267 118d0509483944ebb867ad5d1e254b27 282 Gene3D G3DSA:3.30.470.10 1 117 2.6E-37 T 11-10-2018 Tbd_0267 118d0509483944ebb867ad5d1e254b27 282 SUPERFAMILY SSF56752 2 273 3.53E-77 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tbd_0526 927d806e1a30ded17785c18cbbcab38f 205 Pfam PF02441 Flavoprotein 6 182 4.0E-28 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tbd_0526 927d806e1a30ded17785c18cbbcab38f 205 Gene3D G3DSA:3.40.50.1950 3 205 5.5E-79 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tbd_0526 927d806e1a30ded17785c18cbbcab38f 205 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 36.084 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tbd_0526 927d806e1a30ded17785c18cbbcab38f 205 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 201 1.0E-62 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tbd_0526 927d806e1a30ded17785c18cbbcab38f 205 SUPERFAMILY SSF52507 6 203 6.41E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 ProSitePatterns PS60003 Phosphoketolase signature 2. 183 201 - T 11-10-2018 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 SUPERFAMILY SSF52518 34 393 3.65E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Pfam PF09364 XFP N-terminal domain 35 409 2.8E-184 T 11-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Hamap MF_01403 Probable phosphoketolase. 31 812 40.832 T 11-10-2018 IPR023962 Probable phosphoketolase Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 424 598 5.9E-90 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Gene3D G3DSA:3.40.50.970 22 411 5.0E-171 T 11-10-2018 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Gene3D G3DSA:3.40.50.970 412 628 8.8E-104 T 11-10-2018 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 PIRSF PIRSF017245 22 812 0.0 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Pfam PF09363 XFP C-terminal domain 609 810 5.7E-93 T 11-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 Gene3D G3DSA:3.40.50.920 629 812 1.1E-79 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 ProSitePatterns PS60002 Phosphoketolase signature 1. 170 176 - T 11-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 Tbd_0831 c55e96c774b277062d6c5cc2ebdb2551 812 SUPERFAMILY SSF52518 401 615 2.18E-25 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 1.3E-61 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 SUPERFAMILY SSF51735 1 112 9.85E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Pfam PF10414 Sirohaem synthase dimerisation region 150 205 2.6E-15 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 PIRSF PIRSF036426 1 469 5.8E-195 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Gene3D G3DSA:3.40.1010.10 215 332 4.7E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Gene3D G3DSA:3.30.950.10 333 474 1.9E-49 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 2.3E-52 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Gene3D G3DSA:3.40.50.720 1 112 2.4E-30 T 11-10-2018 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 SUPERFAMILY SSF53790 213 460 9.55E-84 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Pfam PF14824 Sirohaem biosynthesis protein central 121 144 5.5E-7 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Pfam PF13241 Putative NAD(P)-binding 6 115 3.9E-24 T 11-10-2018 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Gene3D G3DSA:3.30.160.110 113 148 3.0E-18 T 11-10-2018 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 SUPERFAMILY SSF75615 114 209 1.96E-22 T 11-10-2018 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 53.0 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2471 f2d4d50fbd487ae17d9fe7b73ef5bbe0 479 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 1.1E-94 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 Pfam PF13091 PLD-like domain 321 447 1.4E-27 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 Pfam PF13091 PLD-like domain 122 234 7.1E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 SUPERFAMILY SSF56024 95 303 2.73E-46 T 11-10-2018 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 Gene3D G3DSA:3.30.870.10 102 301 3.1E-42 T 11-10-2018 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 Gene3D G3DSA:3.30.870.10 302 450 6.2E-30 T 11-10-2018 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 SUPERFAMILY SSF56024 303 466 7.85E-42 T 11-10-2018 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 SMART SM00155 206 233 7.3E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_2243 8dff25f123b9c443e2ad89c18c454792 480 SMART SM00155 393 420 0.0029 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_2222 4e0046444212caacc6dca6ab7f8e8df4 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.967 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Tbd_2222 4e0046444212caacc6dca6ab7f8e8df4 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 259 1.7E-94 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Tbd_2222 4e0046444212caacc6dca6ab7f8e8df4 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Tbd_2222 4e0046444212caacc6dca6ab7f8e8df4 262 Gene3D G3DSA:3.20.20.70 1 262 2.6E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2222 4e0046444212caacc6dca6ab7f8e8df4 262 SUPERFAMILY SSF51366 12 261 2.24E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 SMART SM00926 1 54 2.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 50 3.8E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 SUPERFAMILY SSF50692 554 698 1.08E-41 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Gene3D G3DSA:3.40.50.740 74 537 8.8E-192 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Gene3D G3DSA:3.40.228.10 139 339 8.8E-192 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 PIRSF PIRSF036643 2 707 1.6E-162 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Gene3D G3DSA:2.20.25.90 1 54 2.5E-15 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Pfam PF00384 Molybdopterin oxidoreductase 74 486 2.9E-81 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Gene3D G3DSA:1.10.10.1100 841 892 9.8E-8 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Pfam PF01568 Molydopterin dinucleotide binding domain 581 691 9.4E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 SUPERFAMILY SSF53706 3 568 6.28E-191 T 11-10-2018 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Pfam PF04324 BFD-like [2Fe-2S] binding domain 841 888 4.5E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 432 449 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tbd_2310 aac58cd29da4da30bc5a8c186bca7095 894 Gene3D G3DSA:2.40.40.20 571 697 3.0E-38 T 11-10-2018 Tbd_1106 3d6710b89df4a08f3e2e2bf20bf72c1a 139 Gene3D G3DSA:1.20.1260.10 1 137 1.3E-52 T 11-10-2018 IPR012347 Ferritin-like Tbd_1106 3d6710b89df4a08f3e2e2bf20bf72c1a 139 Pfam PF02915 Rubrerythrin 10 133 1.7E-28 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tbd_1106 3d6710b89df4a08f3e2e2bf20bf72c1a 139 SUPERFAMILY SSF47240 3 138 2.95E-41 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 SUPERFAMILY SSF57802 6 58 7.4E-23 T 11-10-2018 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 Gene3D G3DSA:2.20.28.10 2 60 1.7E-26 T 11-10-2018 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 ProSitePatterns PS00202 Rubredoxin signature. 39 49 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 PIRSF PIRSF000071 6 60 2.3E-24 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 PRINTS PR00163 Rubredoxin signature 9 25 2.7E-7 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 PRINTS PR00163 Rubredoxin signature 39 55 2.7E-7 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2554 d3ddbee385f2a31571dc9a6d9da5c712 60 Pfam PF00301 Rubredoxin 10 55 2.2E-21 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 Pfam PF13857 Ankyrin repeats (many copies) 103 145 3.5E-8 T 11-10-2018 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 Pfam PF12796 Ankyrin repeats (3 copies) 5 99 6.4E-12 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 PRINTS PR01415 Ankyrin repeat signature 34 49 8.1E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 PRINTS PR01415 Ankyrin repeat signature 120 134 8.1E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 SUPERFAMILY SSF48403 5 160 2.88E-36 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 SMART SM00248 33 62 5.3E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 SMART SM00248 104 133 0.0012 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 SMART SM00248 137 166 2100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 SMART SM00248 66 100 0.19 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2728 88ee51bb282ebc585fa41bfd8f13b431 192 Gene3D G3DSA:1.25.40.20 1 185 1.8E-42 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 SUPERFAMILY SSF52540 10 154 2.45E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 300 29.697 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 293 3.9E-96 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 Pfam PF01715 IPP transferase 43 287 2.6E-86 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 Gene3D G3DSA:1.10.20.140 116 187 1.9E-100 T 11-10-2018 Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 SUPERFAMILY SSF52540 7 267 3.48E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1512 53c654da82a2016ec23361bd7d2f5351 313 Gene3D G3DSA:3.40.50.300 13 289 1.9E-100 T 11-10-2018 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Pfam PF01875 Memo-like protein 7 258 1.1E-49 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Gene3D G3DSA:3.40.830.10 3 263 1.2E-59 T 11-10-2018 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Gene3D G3DSA:3.30.700.20 285 457 6.4E-49 T 11-10-2018 IPR027485 AMMECR1, N-terminal Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 285 455 8.7E-59 T 11-10-2018 IPR027623 AmmeMemoRadiSam system protein A Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 261 6.6E-79 T 11-10-2018 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Pfam PF01871 AMMECR1 288 454 2.0E-46 T 11-10-2018 IPR002733 AMMECR1 domain Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Hamap MF_00055 MEMO1 family protein . 3 262 49.756 T 11-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 Gene3D G3DSA:3.30.1490.150 383 455 6.4E-49 T 11-10-2018 Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 SUPERFAMILY SSF143447 280 457 6.02E-57 T 11-10-2018 IPR036071 AMMECR1 domain superfamily Tbd_1586 9584bd8edfd9dd9cf3a88bd51eeacb31 464 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 281 458 5.6E-33 T 11-10-2018 IPR023473 AMMECR1 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 SUPERFAMILY SSF51246 330 446 8.37E-42 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 1.6E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 SMART SM00878 335 441 6.9E-56 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.4E-191 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 SUPERFAMILY SSF56059 82 345 1.27E-70 T 11-10-2018 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 Gene3D G3DSA:3.30.470.130 1 449 1.5E-192 T 11-10-2018 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 3.4E-42 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 4.3E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tbd_1555 e2821262bb349f513c7c38e55876a6d9 472 SUPERFAMILY SSF52440 1 112 1.51E-44 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 269 691 4.0E-148 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 SMART SM00481 4 71 9.5E-17 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 Pfam PF02811 PHP domain 5 90 2.2E-13 T 11-10-2018 IPR004013 PHP domain GO:0003824 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 14.094 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 Gene3D G3DSA:3.20.20.140 1 246 4.8E-52 T 11-10-2018 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 6.4E-156 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 SUPERFAMILY SSF89550 3 183 2.94E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tbd_0828 f6ff0561e08b0c5d38fbcda60353e17e 1023 Pfam PF14579 Helix-hairpin-helix motif 766 856 1.2E-21 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 Pfam PF00155 Aminotransferase class I and II 30 353 1.1E-56 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 Gene3D G3DSA:3.90.1150.10 25 346 1.1E-108 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 355 8.5E-91 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 SUPERFAMILY SSF53383 10 356 7.53E-79 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 Gene3D G3DSA:3.40.640.10 43 264 1.1E-108 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1712 f4c20616729c0b55afbf9f08151c7bef 357 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 357 56.442 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tbd_2517 0572327f6d12274e1150777f79a1eb49 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 5.8E-104 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Tbd_2517 0572327f6d12274e1150777f79a1eb49 276 Pfam PF02219 Methylenetetrahydrofolate reductase 3 275 4.0E-90 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tbd_2517 0572327f6d12274e1150777f79a1eb49 276 Gene3D G3DSA:3.20.20.220 1 276 1.1E-100 T 11-10-2018 Tbd_2517 0572327f6d12274e1150777f79a1eb49 276 SUPERFAMILY SSF51730 4 275 2.35E-97 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 313 4.6E-19 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 SUPERFAMILY SSF51735 2 173 5.2E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 SMART SM00859 3 141 1.2E-62 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 43.012 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 Gene3D G3DSA:3.30.360.10 147 310 1.2E-129 T 11-10-2018 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 342 9.7E-130 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 Gene3D G3DSA:3.40.50.720 3 328 1.2E-129 T 11-10-2018 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 SUPERFAMILY SSF55347 149 310 1.01E-49 T 11-10-2018 Tbd_0455 6110b707cf0483e2950a56fab15150ea 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 140 5.5E-38 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tbd_1284 ec16745c1fc9fe7e4d65286c86bfed5a 224 SUPERFAMILY SSF161098 6 215 7.33E-47 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1284 ec16745c1fc9fe7e4d65286c86bfed5a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 215 8.0E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_1284 ec16745c1fc9fe7e4d65286c86bfed5a 224 Gene3D G3DSA:1.10.3720.10 1 221 2.7E-56 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1284 ec16745c1fc9fe7e4d65286c86bfed5a 224 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 218 8.9E-74 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 18 139 25.497 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 22 130 1.2E-40 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 Gene3D G3DSA:1.20.120.910 7 138 1.2E-38 T 11-10-2018 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 SUPERFAMILY SSF57716 100 137 3.56E-8 T 11-10-2018 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 98 133 1.7E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tbd_2533 5248026a51bbf22f81f7048d7eb2abf4 139 SUPERFAMILY SSF109635 7 99 8.76E-28 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 Pfam PF00361 Proton-conducting membrane transporter 126 401 1.7E-63 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 789 912 2.3E-34 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 Pfam PF13244 Domain of unknown function (DUF4040) 612 675 2.8E-20 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 113 2.0E-10 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 2.6E-38 T 11-10-2018 Tbd_0497 800e5fcee2dede36b1781a918b5847e7 931 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 2.6E-38 T 11-10-2018 Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 Gene3D G3DSA:2.40.170.20 168 674 8.4E-114 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 45 674 4.8E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 153 1.4E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 SUPERFAMILY SSF56935 16 673 3.4E-119 T 11-10-2018 Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 Pfam PF00593 TonB dependent receptor 231 673 1.7E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_0722 19c6c0a2f0fe7f017d0df7d2ff34de38 675 Gene3D G3DSA:2.170.130.10 42 162 2.5E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_0946 a8643e9fa8cb937d516cfb48ee7673b4 232 SUPERFAMILY SSF53335 12 226 2.01E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0946 a8643e9fa8cb937d516cfb48ee7673b4 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 1.9E-85 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Tbd_0946 a8643e9fa8cb937d516cfb48ee7673b4 232 Pfam PF13489 Methyltransferase domain 46 200 8.8E-28 T 11-10-2018 Tbd_0946 a8643e9fa8cb937d516cfb48ee7673b4 232 Gene3D G3DSA:3.40.50.150 8 231 8.9E-78 T 11-10-2018 Tbd_0946 a8643e9fa8cb937d516cfb48ee7673b4 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 231 38.285 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 SUPERFAMILY SSF52540 9 188 1.47E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 276 9.9E-95 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 PIRSF PIRSF006230 1 281 4.5E-87 T 11-10-2018 IPR016478 GTPase, MTG1 Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 Gene3D G3DSA:1.10.1580.10 176 269 2.2E-21 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 Gene3D G3DSA:3.40.50.300 3 173 8.9E-38 T 11-10-2018 Tbd_2120 e3ea9c3bcb9e1c7c504dab9c00ea2282 304 Pfam PF01926 50S ribosome-binding GTPase 119 184 1.7E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_1796 48a9e8344046e80730d79ee6e7d5196c 414 TIGRFAM TIGR03014 EpsL: exopolysaccharide biosynthesis operon protein EpsL 43 414 4.2E-151 T 11-10-2018 IPR017465 Exopolysaccharide biosynthesis operon, EpsL, proteobacteria Tbd_1796 48a9e8344046e80730d79ee6e7d5196c 414 Pfam PF10082 Putative beta-barrel porin 2 230 411 1.4E-9 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 Tbd_1796 48a9e8344046e80730d79ee6e7d5196c 414 SUPERFAMILY SSF56935 166 401 3.97E-7 T 11-10-2018 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 Pfam PF01750 Hydrogenase maturation protease 29 146 6.2E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 Gene3D G3DSA:3.40.50.1450 1 155 6.4E-35 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 SUPERFAMILY SSF53163 1 153 2.46E-36 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 149 1.1E-37 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 PRINTS PR00446 Hydrogen uptake protein signature 35 52 2.0E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.0E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.0E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.0E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1380 acf8116e62a479945c9cdaa9f83d7825 156 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.0E-16 T 11-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tbd_1686 95475255f498356bbda437888ef82d98 907 Gene3D G3DSA:3.40.50.300 395 566 2.3E-57 T 11-10-2018 Tbd_1686 95475255f498356bbda437888ef82d98 907 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 19 284 2.1E-49 T 11-10-2018 IPR014059 Conjugative relaxase, N-terminal Tbd_1686 95475255f498356bbda437888ef82d98 907 Pfam PF13538 UvrD-like helicase C-terminal domain 733 770 1.4E-6 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain Tbd_1686 95475255f498356bbda437888ef82d98 907 SUPERFAMILY SSF55464 1 298 3.52E-67 T 11-10-2018 Tbd_1686 95475255f498356bbda437888ef82d98 907 SUPERFAMILY SSF52540 522 787 1.73E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1686 95475255f498356bbda437888ef82d98 907 Gene3D G3DSA:2.30.30.940 649 734 2.3E-57 T 11-10-2018 Tbd_1686 95475255f498356bbda437888ef82d98 907 SUPERFAMILY SSF52540 410 561 3.29E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1686 95475255f498356bbda437888ef82d98 907 Pfam PF13604 AAA domain 414 602 1.5E-52 T 11-10-2018 Tbd_1686 95475255f498356bbda437888ef82d98 907 Pfam PF08751 TrwC relaxase 16 281 2.8E-70 T 11-10-2018 IPR014862 TrwC relaxase Tbd_1686 95475255f498356bbda437888ef82d98 907 Gene3D G3DSA:3.40.50.300 567 792 2.3E-57 T 11-10-2018 Tbd_0116 18e5257d8c1261f943c3727636693739 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0116 18e5257d8c1261f943c3727636693739 361 Pfam PF00953 Glycosyl transferase family 4 99 285 4.1E-35 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tbd_0116 18e5257d8c1261f943c3727636693739 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 2.8E-133 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0116 18e5257d8c1261f943c3727636693739 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.192 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0116 18e5257d8c1261f943c3727636693739 361 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.3E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0116 18e5257d8c1261f943c3727636693739 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_2372 d83cbf7d9310a1279e4f2596b1247107 262 Pfam PF01578 Cytochrome C assembly protein 37 258 3.2E-26 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Tbd_2389 bd63bdc072d2e3358ae886ecfdce0cad 204 SUPERFAMILY SSF46689 7 79 2.17E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2389 bd63bdc072d2e3358ae886ecfdce0cad 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 8.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_2389 bd63bdc072d2e3358ae886ecfdce0cad 204 SUPERFAMILY SSF48498 82 184 4.45E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_2389 bd63bdc072d2e3358ae886ecfdce0cad 204 Gene3D G3DSA:1.10.357.10 10 192 3.7E-54 T 11-10-2018 Tbd_1812 1749c99b1960c0ca80c548f2bac5c12b 137 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 3 118 4.4E-43 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Tbd_1812 1749c99b1960c0ca80c548f2bac5c12b 137 SUPERFAMILY SSF52980 4 130 1.07E-44 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tbd_1812 1749c99b1960c0ca80c548f2bac5c12b 137 Gene3D G3DSA:3.40.960.10 19 136 9.4E-43 T 11-10-2018 Tbd_1812 1749c99b1960c0ca80c548f2bac5c12b 137 Pfam PF03852 DNA mismatch endonuclease Vsr 4 74 6.9E-29 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Tbd_1812 1749c99b1960c0ca80c548f2bac5c12b 137 PIRSF PIRSF018267 2 137 2.0E-48 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.741 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 SUPERFAMILY SSF55831 1 264 1.83E-130 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 Gene3D G3DSA:3.30.572.10 1 264 4.6E-132 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 Pfam PF00303 Thymidylate synthase 3 264 6.5E-125 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 85 4.4E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.3E-95 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.8E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.8E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.8E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.8E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_2040 dcd135567ecebd7ab18869ec25f1833e 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.8E-49 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 SUPERFAMILY SSF50104 127 272 2.29E-60 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 1.1E-127 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Gene3D G3DSA:4.10.950.10 196 274 2.9E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.6E-32 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 SUPERFAMILY SSF50249 3 125 8.23E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Gene3D G3DSA:2.40.50.140 1 114 8.2E-46 T 11-10-2018 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 SMART SM01383 42 118 8.6E-42 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 PIRSF PIRSF002158 9 275 5.7E-99 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 5.1E-55 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 SMART SM01382 124 252 1.7E-89 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.278 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tbd_0408 a5102b1fcea3a1ec3d9dda77d02c24f2 275 Gene3D G3DSA:2.30.30.30 118 195 2.5E-30 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 SUPERFAMILY SSF55021 4 83 1.75E-14 T 11-10-2018 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 Gene3D G3DSA:3.40.50.170 88 284 1.1E-71 T 11-10-2018 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 Pfam PF00551 Formyl transferase 89 265 2.6E-37 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 2.0E-57 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 4.7E-120 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 SUPERFAMILY SSF53328 89 284 2.75E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 46.175 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 Gene3D G3DSA:3.30.70.260 1 87 2.4E-23 T 11-10-2018 Tbd_1977 ae53f030722074e503473b2d71a3a669 284 PIRSF PIRSF036480 2 284 9.3E-115 T 11-10-2018 Tbd_2082 2dd27774895b5be8387999e5b557aabf 199 SMART SM00754 62 173 5.1E-15 T 11-10-2018 IPR010895 CHRD Tbd_2082 2dd27774895b5be8387999e5b557aabf 199 Pfam PF07589 PEP-CTERM motif 174 197 6.3E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2082 2dd27774895b5be8387999e5b557aabf 199 Pfam PF07452 CHRD domain 64 171 5.1E-20 T 11-10-2018 IPR010895 CHRD Tbd_2082 2dd27774895b5be8387999e5b557aabf 199 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 174 197 6.1E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0596 e4bd735bd1d8ef1d3e502e6bbc253c82 213 Gene3D G3DSA:1.25.40.10 53 159 9.9E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0596 e4bd735bd1d8ef1d3e502e6bbc253c82 213 PIRSF PIRSF006170 2 213 2.0E-58 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 Tbd_0596 e4bd735bd1d8ef1d3e502e6bbc253c82 213 Pfam PF09976 Tetratricopeptide repeat-like domain 16 209 5.6E-63 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Tbd_2750 15521bc46a3cbe7cd54c718fe4a4e61f 773 Pfam PF03176 MMPL family 161 388 1.1E-14 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Tbd_2750 15521bc46a3cbe7cd54c718fe4a4e61f 773 SUPERFAMILY SSF82866 582 770 1.7E-13 T 11-10-2018 Tbd_2750 15521bc46a3cbe7cd54c718fe4a4e61f 773 SUPERFAMILY SSF82866 180 386 1.83E-19 T 11-10-2018 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 Gene3D G3DSA:1.10.8.420 1 51 4.0E-17 T 11-10-2018 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 SUPERFAMILY SSF111304 2 197 2.48E-72 T 11-10-2018 IPR023627 Recombination protein RecR Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 Gene3D G3DSA:3.40.1360.10 76 197 1.8E-41 T 11-10-2018 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 96.188 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 TIGRFAM TIGR00615 recR: recombination protein RecR 3 195 9.7E-68 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 Pfam PF02132 RecR protein 39 77 5.8E-14 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 SMART SM00493 79 164 2.3E-7 T 11-10-2018 IPR006171 TOPRIM domain Tbd_0517 1bd58588ba66f18fe0a9383d0aea7dfd 197 Pfam PF13662 Toprim domain 80 170 8.1E-20 T 11-10-2018 IPR006171 TOPRIM domain Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 Gene3D G3DSA:2.40.30.10 264 359 5.2E-15 T 11-10-2018 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 168 243 1.1E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 SUPERFAMILY SSF52343 349 480 2.88E-15 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 SUPERFAMILY SSF54292 153 251 1.14E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 PRINTS PR00410 Phenol hydroxylase reductase family signature 353 362 2.5E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 PRINTS PR00410 Phenol hydroxylase reductase family signature 369 388 2.5E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 PRINTS PR00410 Phenol hydroxylase reductase family signature 294 306 2.5E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 SUPERFAMILY SSF63380 264 359 4.3E-13 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 Gene3D G3DSA:3.40.50.80 360 483 2.9E-6 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1770 0fea483aa19387dc6c6e7bd0409cb8a0 486 Gene3D G3DSA:3.10.20.30 165 254 2.0E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_1593 b3be89a3284dbc0afbf8d81b7f9f4920 150 SUPERFAMILY SSF101116 11 131 6.02E-39 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Tbd_1593 b3be89a3284dbc0afbf8d81b7f9f4920 150 Gene3D G3DSA:1.20.120.340 3 131 5.2E-42 T 11-10-2018 Tbd_1593 b3be89a3284dbc0afbf8d81b7f9f4920 150 PIRSF PIRSF039090 3 138 9.2E-38 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tbd_1593 b3be89a3284dbc0afbf8d81b7f9f4920 150 TIGRFAM TIGR00208 fliS: flagellar protein FliS 9 127 2.4E-30 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tbd_1593 b3be89a3284dbc0afbf8d81b7f9f4920 150 Pfam PF02561 Flagellar protein FliS 11 127 2.1E-38 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tbd_0271 eb87e1da50176c106dce3211ba715b22 102 Gene3D G3DSA:2.102.10.10 1 102 2.7E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0271 eb87e1da50176c106dce3211ba715b22 102 Pfam PF00355 Rieske [2Fe-2S] domain 5 89 3.3E-15 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Tbd_0271 eb87e1da50176c106dce3211ba715b22 102 SUPERFAMILY SSF50022 4 101 2.23E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0466 865071e6bcfa3f02e8b0ac2adef69e73 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 307 2.8E-37 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tbd_0466 865071e6bcfa3f02e8b0ac2adef69e73 335 Gene3D G3DSA:3.40.190.170 17 330 5.8E-62 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tbd_2780 47afdcc777f3ae6fa445f80bca78b238 273 SUPERFAMILY SSF54427 132 272 9.42E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_2780 47afdcc777f3ae6fa445f80bca78b238 273 SMART SM00978 141 272 1.2E-45 T 11-10-2018 IPR007379 Tim44-like domain Tbd_2780 47afdcc777f3ae6fa445f80bca78b238 273 Pfam PF04280 Tim44-like domain 151 272 1.6E-18 T 11-10-2018 IPR007379 Tim44-like domain Tbd_2780 47afdcc777f3ae6fa445f80bca78b238 273 Gene3D G3DSA:3.10.450.240 145 267 1.2E-6 T 11-10-2018 Tbd_2146 43131bd2d56bb4262bed2a2e1f1c8ccb 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 518 667 3.0E-27 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Tbd_2146 43131bd2d56bb4262bed2a2e1f1c8ccb 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 148 304 2.6E-26 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Tbd_2146 43131bd2d56bb4262bed2a2e1f1c8ccb 1169 Pfam PF05359 Domain of Unknown Function (DUF748) 733 879 8.5E-36 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Tbd_0684 ec53a6d500943d9af67ca419bb77db89 829 Pfam PF12704 MacB-like periplasmic core domain 30 227 2.1E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Tbd_0684 ec53a6d500943d9af67ca419bb77db89 829 Pfam PF02687 FtsX-like permease family 733 821 1.1E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_1430 608456e6d9ee3efe29f4a962f17bfb5c 102 Gene3D G3DSA:1.10.1660.10 14 100 6.7E-17 T 11-10-2018 Tbd_1430 608456e6d9ee3efe29f4a962f17bfb5c 102 Pfam PF13591 MerR HTH family regulatory protein 17 97 4.7E-9 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 SUPERFAMILY SSF46548 5 170 1.1E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 Gene3D G3DSA:1.10.1060.10 6 156 3.2E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 SUPERFAMILY SSF51971 159 411 1.77E-69 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 Gene3D G3DSA:3.40.50.720 157 265 1.7E-19 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 5 480 5.7E-230 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 146 1.5E-35 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 161 468 6.2E-26 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 PRINTS PR00419 Adrenodoxin reductase family signature 184 197 3.8E-36 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 PRINTS PR00419 Adrenodoxin reductase family signature 336 349 3.8E-36 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 PRINTS PR00419 Adrenodoxin reductase family signature 226 236 3.8E-36 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 PRINTS PR00419 Adrenodoxin reductase family signature 302 316 3.8E-36 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 PRINTS PR00419 Adrenodoxin reductase family signature 161 183 3.8E-36 T 11-10-2018 Tbd_2768 44b335e9599f9bd54120559cee51443e 481 Gene3D G3DSA:3.50.50.60 266 410 1.2E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 25 465 1.1E-175 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 376 385 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 174 385 1.5E-75 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 SMART SM00382 186 369 4.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 SUPERFAMILY SSF52540 121 389 2.18E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 Gene3D G3DSA:3.40.50.12240 21 468 1.2E-162 T 11-10-2018 Tbd_1603 dcc5906f7bae8083b9dc58823fd4376b 468 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 463 1.6E-200 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 115 1.1E-36 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Gene3D G3DSA:3.30.870.10 508 687 1.4E-65 T 11-10-2018 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 SUPERFAMILY SSF56024 319 495 1.05E-60 T 11-10-2018 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Pfam PF02503 Polyphosphate kinase middle domain 124 325 2.7E-60 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Gene3D G3DSA:3.30.1840.10 4 316 1.6E-103 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 681 7.4E-299 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 SUPERFAMILY SSF56024 504 683 1.08E-69 T 11-10-2018 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Gene3D G3DSA:3.30.870.10 321 505 1.1E-75 T 11-10-2018 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 680 3.4E-155 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 SUPERFAMILY SSF143724 112 317 1.18E-66 T 11-10-2018 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 SUPERFAMILY SSF140356 6 110 2.22E-36 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 PIRSF PIRSF015589 1 687 2.9E-279 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Tbd_1085 78acf672f1f1229b1df86b754123a992 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 686 28.514 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 SMART SM00862 158 233 5.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 SUPERFAMILY SSF52172 13 139 1.71E-39 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 7.5E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 Pfam PF00072 Response regulator receiver domain 15 124 7.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 Gene3D G3DSA:3.40.50.2300 7 133 9.4E-39 T 11-10-2018 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 SMART SM00448 13 124 9.5E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 Gene3D G3DSA:1.10.10.10 136 241 1.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 SUPERFAMILY SSF46894 135 234 4.82E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1749 a1738a1ef3f16b29d22c47d2ec816c2c 242 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 15 233 7.3E-104 T 11-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 Gene3D G3DSA:2.20.200.10 133 386 5.0E-109 T 11-10-2018 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 SUPERFAMILY SSF56954 23 499 7.72E-93 T 11-10-2018 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 Gene3D G3DSA:1.20.1600.10 85 497 5.0E-109 T 11-10-2018 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 Pfam PF02321 Outer membrane efflux protein 95 286 3.1E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 Pfam PF02321 Outer membrane efflux protein 317 494 3.2E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1356 0e2e4ddb95a565929f0be10dffb5a497 501 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 30 496 1.8E-110 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Tbd_1357 8865f180eb8f7a7486c81256e2a39dc6 152 SUPERFAMILY SSF47175 39 143 2.5E-22 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Tbd_1357 8865f180eb8f7a7486c81256e2a39dc6 152 Pfam PF01322 Cytochrome C' 92 141 5.5E-9 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Tbd_1357 8865f180eb8f7a7486c81256e2a39dc6 152 Gene3D G3DSA:1.20.120.10 32 143 4.6E-15 T 11-10-2018 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 7 380 1.9E-122 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 SUPERFAMILY SSF88697 5 167 4.97E-51 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 Pfam PF14306 PUA-like domain 6 161 2.6E-53 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 Gene3D G3DSA:3.40.50.620 190 388 2.1E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 Gene3D G3DSA:3.10.400.10 4 189 3.1E-59 T 11-10-2018 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 29 385 45.209 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 SUPERFAMILY SSF52374 172 383 1.94E-80 T 11-10-2018 Tbd_0874 1f9ff4c4686f19bd66e6502c42944b9a 402 Pfam PF01747 ATP-sulfurylase 173 382 2.5E-86 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Tbd_1896 f3e0fe8b24a5974690615b6f87f15fe7 211 PIRSF PIRSF004649 1 207 5.5E-56 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Tbd_1896 f3e0fe8b24a5974690615b6f87f15fe7 211 Gene3D G3DSA:1.10.10.640 70 194 7.6E-64 T 11-10-2018 Tbd_1896 f3e0fe8b24a5974690615b6f87f15fe7 211 Pfam PF05494 MlaC protein 33 195 1.6E-60 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Tbd_1896 f3e0fe8b24a5974690615b6f87f15fe7 211 Gene3D G3DSA:3.10.450.50 33 169 7.6E-64 T 11-10-2018 Tbd_0678 9fe662d6f049f2a61491db39d20107e6 180 Gene3D G3DSA:2.40.70.10 54 178 1.3E-29 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Tbd_0678 9fe662d6f049f2a61491db39d20107e6 180 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 61 175 2.6E-25 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Tbd_0678 9fe662d6f049f2a61491db39d20107e6 180 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 84 95 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Tbd_0678 9fe662d6f049f2a61491db39d20107e6 180 Pfam PF13650 Aspartyl protease 74 158 8.1E-19 T 11-10-2018 Tbd_0678 9fe662d6f049f2a61491db39d20107e6 180 SUPERFAMILY SSF50630 64 166 7.3E-18 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Tbd_1051 0bc8675226859399786be3075190cc27 419 SMART SM00155 332 359 2.1E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_1051 0bc8675226859399786be3075190cc27 419 SMART SM00155 155 182 4.1 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_1051 0bc8675226859399786be3075190cc27 419 SUPERFAMILY SSF56024 41 245 3.45E-46 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 Pfam PF13091 PLD-like domain 74 211 3.0E-11 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_1051 0bc8675226859399786be3075190cc27 419 Pfam PF13091 PLD-like domain 262 385 9.7E-28 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_1051 0bc8675226859399786be3075190cc27 419 SUPERFAMILY SSF56024 207 404 1.1E-39 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 PIRSF PIRSF000850 320 393 0.0024 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 PIRSF PIRSF000850 249 310 4.3 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 PIRSF PIRSF000850 57 127 0.096 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 Gene3D G3DSA:3.30.870.10 238 389 1.1E-26 T 11-10-2018 Tbd_1051 0bc8675226859399786be3075190cc27 419 Gene3D G3DSA:3.30.870.10 51 233 9.0E-43 T 11-10-2018 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 SMART SM00363 23 82 2.5E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 Gene3D G3DSA:3.10.290.10 12 75 3.6E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 SUPERFAMILY SSF55174 23 73 9.55E-10 T 11-10-2018 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 Gene3D G3DSA:3.30.2350.10 96 320 1.2E-76 T 11-10-2018 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 Pfam PF00849 RNA pseudouridylate synthase 105 253 1.2E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 316 6.3E-80 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 SUPERFAMILY SSF55120 98 317 8.0E-65 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 Pfam PF01479 S4 domain 23 69 3.3E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1563 2650200485bca94e86154c1a9dadac8a 322 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 143 157 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_2483 31aba7bc3f4d02840760df507b9c3d43 119 Gene3D G3DSA:3.40.1260.10 1 119 2.5E-44 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2483 31aba7bc3f4d02840760df507b9c3d43 119 SUPERFAMILY SSF75169 1 117 7.23E-37 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2483 31aba7bc3f4d02840760df507b9c3d43 119 Pfam PF02635 DsrE/DsrF-like family 1 117 1.8E-29 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_2483 31aba7bc3f4d02840760df507b9c3d43 119 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 117 1.7E-43 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 Gene3D G3DSA:3.40.50.2300 1 132 5.0E-29 T 11-10-2018 Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 SMART SM00471 162 299 1.2E-13 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 SMART SM00448 1 113 9.5E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 Pfam PF01966 HD domain 167 289 1.0E-19 T 11-10-2018 IPR006674 HD domain Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 Pfam PF00072 Response regulator receiver domain 1 111 7.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 SUPERFAMILY SSF52172 1 145 3.13E-30 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 Gene3D G3DSA:1.10.3210.10 140 342 1.1E-75 T 11-10-2018 Tbd_2670 6ae1d92f5052e290bc348a825d1600eb 344 SUPERFAMILY SSF109604 143 329 4.57E-45 T 11-10-2018 Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SUPERFAMILY SSF55785 167 267 3.2E-6 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 Gene3D G3DSA:3.30.450.20 7 126 2.9E-16 T 11-10-2018 Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SMART SM00387 392 487 0.0045 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 Pfam PF07730 Histidine kinase 288 355 6.0E-10 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 2.2E-13 T 11-10-2018 IPR000014 PAS domain Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 Pfam PF00989 PAS fold 17 126 1.1E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 Gene3D G3DSA:3.30.565.10 359 486 2.0E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SMART SM00091 141 213 21.0 T 11-10-2018 IPR000014 PAS domain Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SMART SM00091 15 82 1.1E-6 T 11-10-2018 IPR000014 PAS domain Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 Gene3D G3DSA:3.30.450.20 141 258 1.3E-8 T 11-10-2018 Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SUPERFAMILY SSF55785 18 129 2.09E-15 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1587 c8b9cd25633acb81482b8e4c4db6df2f 493 SUPERFAMILY SSF55874 363 485 1.7E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0760 8c1a975e78f46f7147bc17d09881689e 301 Gene3D G3DSA:3.30.420.40 168 196 2.1E-6 T 11-10-2018 Tbd_0760 8c1a975e78f46f7147bc17d09881689e 301 Gene3D G3DSA:3.30.1490.300 74 130 2.1E-6 T 11-10-2018 Tbd_0760 8c1a975e78f46f7147bc17d09881689e 301 SUPERFAMILY SSF53067 51 152 4.01E-6 T 11-10-2018 Tbd_0760 8c1a975e78f46f7147bc17d09881689e 301 Gene3D G3DSA:3.30.420.40 131 167 2.1E-6 T 11-10-2018 Tbd_0912 d2b6968b46b1bb7f907b58c5339fa64b 139 Gene3D G3DSA:3.30.420.270 64 132 3.3E-10 T 11-10-2018 Tbd_0912 d2b6968b46b1bb7f907b58c5339fa64b 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 136 6.6E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 SUPERFAMILY SSF52343 101 220 2.88E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 Gene3D G3DSA:2.40.30.10 2 96 2.0E-11 T 11-10-2018 Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 Pfam PF00175 Oxidoreductase NAD-binding domain 106 203 1.3E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 SUPERFAMILY SSF63380 4 101 1.22E-14 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 Gene3D G3DSA:3.40.50.80 99 221 2.3E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 PRINTS PR00410 Phenol hydroxylase reductase family signature 190 198 1.9E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.9E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_1948 161b4af754382567b4b9a2b65fdc7228 221 PRINTS PR00410 Phenol hydroxylase reductase family signature 105 124 1.9E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 SUPERFAMILY SSF102114 22 107 5.1E-15 T 11-10-2018 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 Pfam PF04055 Radical SAM superfamily 30 113 1.6E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 PIRSF PIRSF000370 5 215 1.7E-69 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 7 213 38.063 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 7 216 1.2E-109 T 11-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 Pfam PF13394 4Fe-4S single cluster domain 28 110 2.5E-11 T 11-10-2018 Tbd_2203 805017f46aaa2ce698dbfa798113f039 216 Gene3D G3DSA:3.20.20.70 6 210 3.3E-37 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 Gene3D G3DSA:1.20.1370.20 489 585 9.3E-29 T 11-10-2018 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 176 193 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 92 115 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 155 173 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 364 391 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 195 213 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PRINTS PR00067 Catalase signature 396 422 1.3E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 SUPERFAMILY SSF52317 590 710 1.14E-13 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 ProSitePatterns PS00438 Catalase proximal active site signature. 115 131 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 Pfam PF06628 Catalase-related immune-responsive 492 555 1.1E-20 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 Pfam PF00199 Catalase 79 463 1.7E-174 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 SUPERFAMILY SSF56634 71 567 6.8E-210 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 PIRSF PIRSF038927 44 735 5.4E-289 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 409 417 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 Gene3D G3DSA:2.40.180.10 6 488 8.4E-198 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 SMART SM01060 79 467 1.5E-255 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Tbd_2311 5a3ac9fc63aa4495f576abb9e029eda1 737 Gene3D G3DSA:3.40.50.880 586 734 3.5E-29 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SUPERFAMILY SSF58104 248 529 2.35E-73 T 11-10-2018 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SMART SM00304 228 280 2.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 Gene3D G3DSA:1.10.287.950 227 530 6.8E-86 T 11-10-2018 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 Gene3D G3DSA:3.30.450.20 13 146 4.6E-29 T 11-10-2018 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SMART SM00283 281 528 3.4E-92 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 113 2.5E-14 T 11-10-2018 IPR000014 PAS domain Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 496 2.0E-51 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 Pfam PF08447 PAS fold 30 113 8.4E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SUPERFAMILY SSF55785 21 114 3.14E-27 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SMART SM00086 80 121 0.0012 T 11-10-2018 IPR001610 PAC motif Tbd_2406 35d99d9f674d8b4c447cb349aee61c60 566 SMART SM00091 8 74 0.0029 T 11-10-2018 IPR000014 PAS domain Tbd_1545 a780cfcc3d27704c6a773d66aae23596 268 Pfam PF01063 Amino-transferase class IV 24 244 4.4E-41 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tbd_1545 a780cfcc3d27704c6a773d66aae23596 268 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 259 3.0E-72 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Tbd_1545 a780cfcc3d27704c6a773d66aae23596 268 Gene3D G3DSA:3.30.470.10 1 105 1.3E-27 T 11-10-2018 Tbd_1545 a780cfcc3d27704c6a773d66aae23596 268 Gene3D G3DSA:3.20.10.10 116 268 2.5E-47 T 11-10-2018 Tbd_1545 a780cfcc3d27704c6a773d66aae23596 268 SUPERFAMILY SSF56752 2 264 2.75E-59 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 Gene3D G3DSA:2.20.28.10 1 56 2.8E-29 T 11-10-2018 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 PRINTS PR00163 Rubredoxin signature 3 19 1.6E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 PRINTS PR00163 Rubredoxin signature 33 49 1.6E-9 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 Pfam PF00301 Rubredoxin 4 49 1.0E-23 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 PIRSF PIRSF000071 1 56 2.1E-27 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 SUPERFAMILY SSF57802 1 53 6.73E-24 T 11-10-2018 Tbd_2316 178030ac8e95b121c17ba7d416c4212c 56 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 Gene3D G3DSA:1.10.287.1040 6 80 4.5E-27 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 Pfam PF02609 Exonuclease VII small subunit 13 63 2.9E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 SUPERFAMILY SSF116842 8 74 8.76E-20 T 11-10-2018 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 11 53 4.0E-17 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 12 66 9.5E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 12 72 14.044 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tbd_0881 c6652f8c54b0832b3c866e88d276f58a 80 PIRSF PIRSF006488 1 80 6.0E-25 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 37.602 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 SUPERFAMILY SSF52096 26 284 8.71E-83 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 Gene3D G3DSA:3.90.226.10 26 286 7.0E-81 T 11-10-2018 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 2.6E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 2.6E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 2.6E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 2.6E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 2.6E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 3.8E-125 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tbd_1912 83446248e3ab7a90c88718688fbcef14 288 Pfam PF01039 Carboxyl transferase domain 108 240 1.7E-13 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Tbd_1663 00ecf1f5938fe725e46c2b0aa28f02a8 148 Hamap MF_00042 Ribonuclease H [rnhA]. 3 148 32.479 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 Tbd_1663 00ecf1f5938fe725e46c2b0aa28f02a8 148 Pfam PF00075 RNase H 7 142 2.9E-48 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Tbd_1663 00ecf1f5938fe725e46c2b0aa28f02a8 148 Gene3D G3DSA:3.30.420.10 3 147 8.9E-60 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_1663 00ecf1f5938fe725e46c2b0aa28f02a8 148 SUPERFAMILY SSF53098 4 142 1.64E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 5.2E-78 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Gene3D G3DSA:3.30.160.40 220 304 1.1E-25 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PIRSF PIRSF001438 1 306 3.6E-118 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 SUPERFAMILY SSF54782 218 304 1.57E-24 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 2.3E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.3E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.3E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.3E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.3E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 2.3E-108 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 1.0E-17 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 SUPERFAMILY SSF53850 2 217 5.43E-83 T 11-10-2018 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.887 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Gene3D G3DSA:3.40.190.10 5 207 8.0E-84 T 11-10-2018 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 Gene3D G3DSA:3.40.190.10 101 200 8.0E-84 T 11-10-2018 Tbd_2568 5c4d8e47142aa254b156f09c21df9364 306 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 Gene3D G3DSA:1.10.287.470 105 178 1.3E-113 T 11-10-2018 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 Gene3D G3DSA:2.40.30.170 56 310 1.3E-113 T 11-10-2018 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 SUPERFAMILY SSF111369 59 307 9.02E-87 T 11-10-2018 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 Gene3D G3DSA:2.40.50.100 70 214 1.3E-113 T 11-10-2018 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 Gene3D G3DSA:2.40.420.20 311 380 1.3E-113 T 11-10-2018 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 382 9.4E-90 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1418 3287c3bab3308b16a13006a2e82297c3 400 Pfam PF13533 Biotin-lipoyl like 74 119 6.6E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Tbd_0674 cbb15fd38243bc6803ceffff49ebd35d 394 Pfam PF07690 Major Facilitator Superfamily 15 249 2.4E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_0674 cbb15fd38243bc6803ceffff49ebd35d 394 SUPERFAMILY SSF103473 8 384 6.8E-65 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_0674 cbb15fd38243bc6803ceffff49ebd35d 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 263 279 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Tbd_0674 cbb15fd38243bc6803ceffff49ebd35d 394 Gene3D G3DSA:1.20.1250.20 4 192 1.5E-24 T 11-10-2018 Tbd_0674 cbb15fd38243bc6803ceffff49ebd35d 394 Gene3D G3DSA:1.20.1250.20 203 390 5.2E-29 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 780 1.2E-40 T 11-10-2018 IPR000160 GGDEF domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF55781 145 321 6.98E-18 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 54 153 4.9E-19 T 11-10-2018 IPR000014 PAS domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 498 612 6.3E-18 T 11-10-2018 IPR000014 PAS domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00065 348 494 0.0046 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00065 162 331 0.013 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00091 27 100 2.3 T 11-10-2018 IPR000014 PAS domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00091 494 559 1.5E-6 T 11-10-2018 IPR000014 PAS domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Pfam PF00990 Diguanylate cyclase, GGDEF domain 617 776 4.1E-47 T 11-10-2018 IPR000160 GGDEF domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.30.450.40 327 495 1.1E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Pfam PF13426 PAS domain 48 145 6.8E-17 T 11-10-2018 IPR000014 PAS domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Pfam PF00563 EAL domain 798 1032 2.9E-69 T 11-10-2018 IPR001633 EAL domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.30.450.20 496 614 1.9E-24 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF55781 352 497 8.94E-10 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.20.20.450 794 1044 2.6E-97 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Pfam PF13185 GAF domain 174 321 3.0E-19 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.30.450.20 19 156 7.7E-35 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00052 791 1037 1.6E-115 T 11-10-2018 IPR001633 EAL domain Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF55785 54 147 2.9E-23 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.30.450.40 157 326 1.1E-20 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Gene3D G3DSA:3.30.70.270 615 793 2.1E-62 T 11-10-2018 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 Pfam PF08448 PAS fold 500 607 7.5E-9 T 11-10-2018 IPR013656 PAS fold-4 Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF141868 798 1045 4.05E-88 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF55073 622 783 1.41E-47 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SUPERFAMILY SSF55785 505 613 1.93E-20 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00086 105 147 2.4E-5 T 11-10-2018 IPR001610 PAC motif Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00086 564 606 6.6E-7 T 11-10-2018 IPR001610 PAC motif Tbd_1042 fa997d7a3e029754e3d8b3434478c0a1 1059 SMART SM00267 606 781 3.4E-58 T 11-10-2018 IPR000160 GGDEF domain Tbd_1239 32141582e3a6e90d9d097707263f3985 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 471 1.6E-219 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Tbd_1239 32141582e3a6e90d9d097707263f3985 472 Gene3D G3DSA:3.90.550.10 1 352 3.7E-119 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1239 32141582e3a6e90d9d097707263f3985 472 Gene3D G3DSA:2.60.120.10 364 463 1.3E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_1239 32141582e3a6e90d9d097707263f3985 472 SUPERFAMILY SSF53448 1 283 3.52E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1239 32141582e3a6e90d9d097707263f3985 472 SUPERFAMILY SSF51182 187 471 3.95E-87 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Tbd_1239 32141582e3a6e90d9d097707263f3985 472 Pfam PF01050 Mannose-6-phosphate isomerase 317 467 2.9E-73 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Tbd_1239 32141582e3a6e90d9d097707263f3985 472 Pfam PF00483 Nucleotidyl transferase 5 288 6.4E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_0188 1fecc5cb2f6dd5a21b2fc241b68c5447 206 Pfam PF01926 50S ribosome-binding GTPase 28 146 1.8E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0188 1fecc5cb2f6dd5a21b2fc241b68c5447 206 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 196 27.216 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Tbd_0188 1fecc5cb2f6dd5a21b2fc241b68c5447 206 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 192 7.3E-70 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Tbd_0188 1fecc5cb2f6dd5a21b2fc241b68c5447 206 SUPERFAMILY SSF52540 20 196 1.67E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0188 1fecc5cb2f6dd5a21b2fc241b68c5447 206 Gene3D G3DSA:3.40.50.300 3 203 2.6E-50 T 11-10-2018 Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 SUPERFAMILY SSF52540 18 213 2.08E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 263 447 8.0E-33 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 205 3.9E-12 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 21 449 3.1E-125 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 Gene3D G3DSA:3.40.50.300 63 207 5.7E-20 T 11-10-2018 Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 Gene3D G3DSA:3.40.50.880 259 472 8.2E-12 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 18 454 37.744 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Tbd_2473 63f2171d82b967962a39a56b1d7d0d27 473 SUPERFAMILY SSF52317 260 465 1.62E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 9.0E-20 T 11-10-2018 Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 Gene3D G3DSA:3.30.70.1710 3 91 5.3E-35 T 11-10-2018 Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 Pfam PF00936 BMC domain 9 84 2.2E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 SMART SM00877 8 85 4.5E-29 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Tbd_2645 657124bce5156720c0872f38ed9ff6b9 101 SUPERFAMILY SSF143414 9 95 6.54E-27 T 11-10-2018 IPR037233 CcmK-like superfamily Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 113 6.6E-20 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 SUPERFAMILY SSF69721 2 113 3.66E-27 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 Gene3D G3DSA:3.30.1420.10 2 38 5.8E-14 T 11-10-2018 Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 Pfam PF04358 DsrC like protein 5 113 8.8E-28 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 Gene3D G3DSA:1.10.10.370 44 115 1.6E-19 T 11-10-2018 Tbd_1365 542395b40fcd8d302b6e7a716e2a21ea 119 PIRSF PIRSF006223 3 116 4.9E-37 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 Gene3D G3DSA:3.30.870.10 207 384 1.4E-25 T 11-10-2018 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 Hamap MF_01917 Cardiolipin synthase B [clsB]. 14 396 44.83 T 11-10-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 Gene3D G3DSA:3.30.870.10 16 200 3.5E-36 T 11-10-2018 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 SUPERFAMILY SSF56024 188 371 2.02E-38 T 11-10-2018 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 SMART SM00155 120 147 0.0018 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 SMART SM00155 299 326 0.3 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 SUPERFAMILY SSF56024 9 198 1.86E-39 T 11-10-2018 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 Pfam PF13091 PLD-like domain 36 143 8.5E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_0446 bc2062f8b7680265c257aa411d00bfbc 396 Pfam PF13091 PLD-like domain 228 352 1.7E-24 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 331 36.094 T 11-10-2018 IPR033752 MetA family Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 SUPERFAMILY SSF52317 18 327 3.27E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 Gene3D G3DSA:3.40.50.880 1 331 9.0E-94 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 PIRSF PIRSF000450 293 333 0.48 T 11-10-2018 IPR033752 MetA family Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 PIRSF PIRSF000450 1 296 1.6E-58 T 11-10-2018 IPR033752 MetA family Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 35 255 7.0E-129 T 11-10-2018 Tbd_0246 c10639eb99f815278fb776fbf1364e5e 349 Pfam PF04204 Homoserine O-succinyltransferase 2 329 4.1E-99 T 11-10-2018 IPR033752 MetA family Tbd_1718 58d2d9482fb44f2f2697af9844f7c148 405 Pfam PF07690 Major Facilitator Superfamily 8 338 2.1E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_1718 58d2d9482fb44f2f2697af9844f7c148 405 Gene3D G3DSA:1.20.1250.20 1 397 9.5E-23 T 11-10-2018 Tbd_1718 58d2d9482fb44f2f2697af9844f7c148 405 SUPERFAMILY SSF103473 2 401 8.24E-27 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 SUPERFAMILY SSF50814 11 172 1.75E-42 T 11-10-2018 IPR012674 Calycin Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 4.3E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 4.3E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PRINTS PR01171 Bacterial lipocalin signature 100 114 4.3E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PRINTS PR01171 Bacterial lipocalin signature 117 125 4.3E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PRINTS PR01171 Bacterial lipocalin signature 132 143 4.3E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 PIRSF PIRSF036893 2 173 2.0E-53 T 11-10-2018 IPR022271 Lipocalin, ApoD type Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 Gene3D G3DSA:2.40.128.20 17 173 6.0E-47 T 11-10-2018 IPR012674 Calycin Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 Pfam PF08212 Lipocalin-like domain 31 169 1.8E-45 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Tbd_1196 60ff49c8e55139025d6679ac2761aa79 173 ProSitePatterns PS00213 Lipocalin signature. 32 43 - T 11-10-2018 IPR022272 Lipocalin family conserved site Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 SUPERFAMILY SSF51735 2 335 3.16E-100 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.0E-58 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 Gene3D G3DSA:3.40.50.720 3 273 2.3E-144 T 11-10-2018 Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.9E-138 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 Gene3D G3DSA:3.90.25.10 193 328 2.3E-144 T 11-10-2018 Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 9.0E-5 T 11-10-2018 Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 9.0E-5 T 11-10-2018 Tbd_1774 536e320cf93c2aa4b9e0ad011f1b6dd8 336 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 9.0E-5 T 11-10-2018 Tbd_1055 989691bd53d0ac56a34c7766b6ee750f 218 Gene3D G3DSA:3.40.50.150 7 217 1.4E-32 T 11-10-2018 Tbd_1055 989691bd53d0ac56a34c7766b6ee750f 218 Pfam PF13489 Methyltransferase domain 36 189 5.1E-18 T 11-10-2018 Tbd_1055 989691bd53d0ac56a34c7766b6ee750f 218 SUPERFAMILY SSF53335 5 217 1.64E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 SUPERFAMILY SSF118215 9 406 1.83E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 4.9E-129 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 Gene3D G3DSA:1.10.3860.10 5 412 4.2E-138 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 55 75 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 1.8E-52 T 11-10-2018 Tbd_0646 220d2bfaa129016a78c4870ff8bc7298 436 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 1.8E-52 T 11-10-2018 Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 SUPERFAMILY SSF52788 2 153 2.75E-54 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 SMART SM00226 3 152 2.6E-56 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 149 3.3E-45 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 9.4E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 9.4E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 9.4E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 124 139 9.4E-24 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tbd_1565 cd00625f37542bdea9cfdb0e703b1a41 165 Gene3D G3DSA:3.40.50.2300 1 158 1.4E-59 T 11-10-2018 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 SUPERFAMILY SSF56112 3 268 8.77E-80 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 SMART SM00220 6 266 3.8E-69 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 Gene3D G3DSA:1.10.510.10 83 271 3.6E-52 T 11-10-2018 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 12 35 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 PIRSF PIRSF000654 24 274 2.5E-26 T 11-10-2018 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 Gene3D G3DSA:3.30.200.20 1 82 1.4E-29 T 11-10-2018 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 Pfam PF00069 Protein kinase domain 6 259 1.6E-52 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tbd_1700 1af18e0c9eb1604c9a92956aca22f7e1 425 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 126 138 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 PIRSF PIRSF024622 4 172 1.6E-24 T 11-10-2018 IPR016824 Tfp pilus assembly protein FimT Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 Gene3D G3DSA:3.30.700.10 10 151 1.3E-15 T 11-10-2018 Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 29 2.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 Pfam PF12019 Type II transport protein GspH 45 156 2.0E-4 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Tbd_1864 5ead2ada04ef04a5c8204f8dd880e0da 172 SUPERFAMILY SSF54523 10 98 9.42E-17 T 11-10-2018 Tbd_1761 d413f40b4a27b7cf775f713c82b85ee9 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 3 414 6.4E-156 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Tbd_1761 d413f40b4a27b7cf775f713c82b85ee9 414 Pfam PF12704 MacB-like periplasmic core domain 26 212 2.7E-16 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Tbd_1761 d413f40b4a27b7cf775f713c82b85ee9 414 Pfam PF02687 FtsX-like permease family 300 407 1.1E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_0511 e644538693c98231f7ee34a9bb66c7ee 319 Gene3D G3DSA:3.60.110.10 17 293 2.7E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_0511 e644538693c98231f7ee34a9bb66c7ee 319 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 177 197 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Tbd_0511 e644538693c98231f7ee34a9bb66c7ee 319 Pfam PF00795 Carbon-nitrogen hydrolase 30 281 1.6E-51 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tbd_0511 e644538693c98231f7ee34a9bb66c7ee 319 SUPERFAMILY SSF56317 27 290 1.05E-75 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_0317 83ee7a88d65c28c47ac98eaa0a768618 230 SUPERFAMILY SSF53271 55 224 7.93E-33 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_0317 83ee7a88d65c28c47ac98eaa0a768618 230 Gene3D G3DSA:3.40.50.2020 110 229 6.3E-16 T 11-10-2018 Tbd_0317 83ee7a88d65c28c47ac98eaa0a768618 230 Pfam PF00156 Phosphoribosyl transferase domain 136 222 1.7E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_1693 885a800c8010454c65a293a2f3910111 830 Gene3D G3DSA:3.40.50.200 243 631 2.6E-30 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tbd_1693 885a800c8010454c65a293a2f3910111 830 Pfam PF00082 Subtilase family 283 620 1.5E-35 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Tbd_1693 885a800c8010454c65a293a2f3910111 830 PRINTS PR00723 Subtilisin serine protease family (S8) signature 556 572 9.1E-5 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_1693 885a800c8010454c65a293a2f3910111 830 PRINTS PR00723 Subtilisin serine protease family (S8) signature 321 334 9.1E-5 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_1693 885a800c8010454c65a293a2f3910111 830 PRINTS PR00723 Subtilisin serine protease family (S8) signature 280 299 9.1E-5 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Tbd_1693 885a800c8010454c65a293a2f3910111 830 SUPERFAMILY SSF52743 282 636 4.06E-41 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 243 4.8E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 299 314 4.8E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Gene3D G3DSA:3.40.50.300 221 377 6.8E-97 T 11-10-2018 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 446 1.0E-98 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Pfam PF12631 MnmE helical domain 127 443 3.3E-52 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 340 1.1E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Pfam PF01926 50S ribosome-binding GTPase 223 322 4.0E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 SUPERFAMILY SSF52540 76 367 6.9E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 12 124 2.8E-35 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Gene3D G3DSA:1.20.120.430 126 446 6.8E-97 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 446 31.975 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tbd_2824 fa030de73c9ab77bb14b0cec6cfab663 446 Gene3D G3DSA:3.30.1360.120 4 125 1.6E-39 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Gene3D G3DSA:3.10.580.10 147 297 2.1E-29 T 11-10-2018 Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Gene3D G3DSA:2.60.120.10 3 146 1.5E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 488 627 8.4E-41 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Pfam PF00571 CBS domain 233 285 2.1E-9 T 11-10-2018 IPR000644 CBS domain Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Pfam PF00571 CBS domain 171 222 7.0E-9 T 11-10-2018 IPR000644 CBS domain Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 SUPERFAMILY SSF51206 9 142 4.71E-14 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 SUPERFAMILY SSF54631 171 284 4.42E-27 T 11-10-2018 Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 SMART SM00116 240 287 0.0014 T 11-10-2018 IPR000644 CBS domain Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 SMART SM00116 176 223 7.5E-7 T 11-10-2018 IPR000644 CBS domain Tbd_0090 81b27c8d16e39a63620c56b85dda8d14 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 312 449 6.1E-50 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 SMART SM00968 519 619 1.2E-10 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 Gene3D G3DSA:3.40.50.300 1 228 2.0E-49 T 11-10-2018 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 SUPERFAMILY SSF52540 2 1159 1.34E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1148 7.5E-64 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1155 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 Gene3D G3DSA:3.40.50.300 1003 1165 9.6E-46 T 11-10-2018 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1157 22.91 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 SUPERFAMILY SSF75553 478 665 7.32E-9 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tbd_1228 b1726d2bc0bd495dd10aa96aefaded76 1165 PIRSF PIRSF005719 1 1163 1.9E-250 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein Tbd_2716 0e114e0a1a1fb59acf8e077649c33997 310 Pfam PF03186 CobD/Cbib protein 11 286 8.8E-94 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tbd_2716 0e114e0a1a1fb59acf8e077649c33997 310 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 272 2.3E-61 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tbd_2716 0e114e0a1a1fb59acf8e077649c33997 310 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 309 103.942 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 SUPERFAMILY SSF74650 1558 1826 6.28E-83 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:1.50.10.10 2362 2774 1.3E-196 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:1.50.10.140 1324 1529 4.0E-8 T 11-10-2018 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:2.60.420.10 2358 2834 1.3E-196 T 11-10-2018 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Pfam PF10091 Putative glucoamylase 1330 1517 4.8E-15 T 11-10-2018 IPR019282 Domain of unknown function DUF2329 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Pfam PF06165 Glycosyltransferase family 36 2078 2317 1.1E-80 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Pfam PF06165 Glycosyltransferase family 36 1570 1823 4.0E-81 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2348 2774 1.1E-121 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:2.70.98.40 2057 2353 1.3E-99 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:2.70.98.40 1558 1855 6.1E-92 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 SMART SM01068 1548 1609 5.2E-23 T 11-10-2018 IPR009342 Putative carbohydrate binding domain Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 SMART SM01068 2055 2120 1.9E-31 T 11-10-2018 IPR009342 Putative carbohydrate binding domain Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 Gene3D G3DSA:1.50.10.140 981 1124 3.5E-14 T 11-10-2018 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 SUPERFAMILY SSF48208 2324 2857 7.37E-94 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tbd_1304 edebe131647dc4e56648566e73e0334f 2859 SUPERFAMILY SSF74650 2055 2319 6.91E-90 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 29 47 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 238 261 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 407 430 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 485 504 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 219 236 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 PRINTS PR01607 Apyrase family signature 267 287 6.5E-9 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 SUPERFAMILY SSF56300 26 322 2.46E-65 T 11-10-2018 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 Gene3D G3DSA:3.90.780.10 356 553 7.5E-31 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 Gene3D G3DSA:3.60.21.10 25 325 4.3E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 SUPERFAMILY SSF55816 346 546 4.05E-29 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1621 f9d4d526441f20858187fa77115e96b0 577 Pfam PF02872 5'-nucleotidase, C-terminal domain 349 499 2.6E-27 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0642 7ac0b147b6523d9468379c1c80e278f8 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 4 178 1.0E-80 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Tbd_0642 7ac0b147b6523d9468379c1c80e278f8 201 SUPERFAMILY SSF46626 17 192 8.85E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0642 7ac0b147b6523d9468379c1c80e278f8 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 179 2.3E-83 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Tbd_0642 7ac0b147b6523d9468379c1c80e278f8 201 Gene3D G3DSA:1.10.760.10 41 200 6.5E-70 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1290 205e34d0e3ded91554008c276052e062 209 Gene3D G3DSA:3.40.50.12740 2 209 4.1E-65 T 11-10-2018 Tbd_1290 205e34d0e3ded91554008c276052e062 209 Pfam PF00072 Response regulator receiver domain 4 115 1.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1290 205e34d0e3ded91554008c276052e062 209 SMART SM00421 146 203 9.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1290 205e34d0e3ded91554008c276052e062 209 SMART SM00448 2 115 8.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1290 205e34d0e3ded91554008c276052e062 209 SUPERFAMILY SSF46894 138 209 1.09E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1290 205e34d0e3ded91554008c276052e062 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1290 205e34d0e3ded91554008c276052e062 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1290 205e34d0e3ded91554008c276052e062 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1290 205e34d0e3ded91554008c276052e062 209 SUPERFAMILY SSF52172 1 130 1.99E-35 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1290 205e34d0e3ded91554008c276052e062 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 9.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2621 b495f07c62b5d024fde39211eb5c9325 785 SUPERFAMILY SSF53300 595 779 1.14E-19 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_2621 b495f07c62b5d024fde39211eb5c9325 785 SMART SM00327 593 774 2.9E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_2621 b495f07c62b5d024fde39211eb5c9325 785 Gene3D G3DSA:3.40.50.410 588 773 2.2E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_2621 b495f07c62b5d024fde39211eb5c9325 785 Pfam PF00092 von Willebrand factor type A domain 596 762 2.0E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 SUPERFAMILY SSF46894 147 213 1.16E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.7E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 8.6E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 SMART SM00421 153 210 2.8E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 Pfam PF00072 Response regulator receiver domain 9 120 2.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 Gene3D G3DSA:3.40.50.12740 8 214 8.0E-63 T 11-10-2018 Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 SUPERFAMILY SSF52172 6 138 5.12E-35 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1399 b3b507bdd6eb2a748311a3865b06d711 219 SMART SM00448 7 120 1.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 412 580 2.2E-13 T 11-10-2018 IPR000160 GGDEF domain Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 SMART SM00267 397 584 3.1E-7 T 11-10-2018 IPR000160 GGDEF domain Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 SMART SM00052 2 244 5.2E-25 T 11-10-2018 IPR001633 EAL domain Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 Gene3D G3DSA:3.20.20.450 3 250 5.1E-63 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 510 1.2E-13 T 11-10-2018 IPR000160 GGDEF domain Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 Gene3D G3DSA:3.30.70.270 403 582 2.3E-28 T 11-10-2018 Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 Gene3D G3DSA:3.10.580.10 277 402 1.6E-8 T 11-10-2018 Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 SUPERFAMILY SSF54631 275 402 4.53E-9 T 11-10-2018 Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 SUPERFAMILY SSF141868 8 239 5.36E-62 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 SUPERFAMILY SSF55073 414 582 1.26E-24 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0350 8db793261ec182ccc39650f5e99241f8 606 Pfam PF00563 EAL domain 10 239 6.6E-53 T 11-10-2018 IPR001633 EAL domain Tbd_0824 8f842a26836757c4fe086bcf305b1d55 270 SUPERFAMILY SSF52540 23 233 3.04E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0824 8f842a26836757c4fe086bcf305b1d55 270 Pfam PF07728 AAA domain (dynein-related subfamily) 37 171 6.1E-33 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_0824 8f842a26836757c4fe086bcf305b1d55 270 Gene3D G3DSA:3.40.50.300 21 189 2.4E-31 T 11-10-2018 Tbd_0824 8f842a26836757c4fe086bcf305b1d55 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 184 266 3.1E-24 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 326 404 4.0E-20 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 Pfam PF07559 Flagellar basal body protein FlaE 177 286 1.5E-28 T 11-10-2018 IPR011491 Flagellar hook protein FlgE Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 Gene3D G3DSA:2.60.98.20 150 287 2.9E-39 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 387 3.0E-110 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 Pfam PF00460 Flagella basal body rod protein 3 33 8.0E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 SUPERFAMILY SSF117143 79 366 7.32E-85 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tbd_1634 0286e2733b65790c35fce3d97c30d11d 405 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 497 509 1.3E-9 T 11-10-2018 Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 317 333 1.3E-9 T 11-10-2018 Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 380 394 1.3E-9 T 11-10-2018 Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 Gene3D G3DSA:3.40.50.150 295 652 4.8E-43 T 11-10-2018 Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 Pfam PF02384 N-6 DNA Methylase 294 336 1.1E-4 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Tbd_0925 0a45a71bf713b51473e38c9e68a59639 1049 SUPERFAMILY SSF53335 206 637 3.09E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 SMART SM00962 175 375 4.2E-113 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 104 375 61.008 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 348 361 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 105 374 4.7E-106 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 Pfam PF00448 SRP54-type protein, GTPase domain 176 374 3.5E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 SUPERFAMILY SSF52540 169 373 2.3E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 Pfam PF02881 SRP54-type protein, helical bundle domain 91 157 7.6E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 Gene3D G3DSA:3.40.50.300 175 363 2.3E-109 T 11-10-2018 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 SUPERFAMILY SSF47364 75 154 2.75E-21 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 Gene3D G3DSA:1.20.120.140 78 372 2.3E-109 T 11-10-2018 Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 SMART SM00382 174 356 1.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0376 8777bc64619ba75d12c58b501298dd7d 376 SMART SM00963 80 161 2.7E-23 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Pfam PF00999 Sodium/hydrogen exchanger family 12 375 1.7E-67 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 SUPERFAMILY SSF116726 574 651 1.7E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Pfam PF02080 TrkA-C domain 589 650 9.9E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Gene3D G3DSA:3.40.50.720 407 567 2.8E-39 T 11-10-2018 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Pfam PF02254 TrkA-N domain 411 525 9.4E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 SUPERFAMILY SSF51735 408 549 7.62E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Gene3D G3DSA:1.20.1530.20 4 383 2.4E-89 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_0539 e53165f0bc0f7c8f00e0d4eebc1af94e 658 Gene3D G3DSA:3.30.70.1450 582 655 7.4E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tbd_1096 29cc84b8caa34300813208784fc89009 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 49 71 4.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1096 29cc84b8caa34300813208784fc89009 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 13 34 4.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1096 29cc84b8caa34300813208784fc89009 84 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 34 49 4.6E-17 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1096 29cc84b8caa34300813208784fc89009 84 Pfam PF01313 Bacterial export proteins, family 3 3 72 9.8E-27 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1096 29cc84b8caa34300813208784fc89009 84 PIRSF PIRSF004669 1 84 1.2E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 2.2E-28 T 11-10-2018 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.2E-28 T 11-10-2018 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.2E-28 T 11-10-2018 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 2.2E-28 T 11-10-2018 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 Gene3D G3DSA:3.40.50.720 1 333 9.2E-99 T 11-10-2018 Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 3.5E-57 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_2699 f29bd40afe291785ce4494a65957cc73 336 SUPERFAMILY SSF51735 1 333 3.36E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1661 3db9a80a9968046d43edb9032c763941 324 Gene3D G3DSA:3.40.50.2300 69 293 1.6E-22 T 11-10-2018 Tbd_1661 3db9a80a9968046d43edb9032c763941 324 Gene3D G3DSA:3.40.50.2300 145 313 1.6E-22 T 11-10-2018 Tbd_1661 3db9a80a9968046d43edb9032c763941 324 Pfam PF04392 ABC transporter substrate binding protein 88 312 1.2E-9 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein Tbd_0048 ec8c1a17ef9372f5ef376a11e6f65edf 444 Gene3D G3DSA:3.40.50.10840 5 243 3.2E-19 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Tbd_0048 ec8c1a17ef9372f5ef376a11e6f65edf 444 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 263 423 6.5E-36 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Tbd_0048 ec8c1a17ef9372f5ef376a11e6f65edf 444 Gene3D G3DSA:3.40.980.20 252 430 1.2E-10 T 11-10-2018 Tbd_0048 ec8c1a17ef9372f5ef376a11e6f65edf 444 SUPERFAMILY SSF142764 5 430 2.09E-79 T 11-10-2018 Tbd_0048 ec8c1a17ef9372f5ef376a11e6f65edf 444 Pfam PF07005 Putative sugar-binding N-terminal domain 5 239 1.9E-53 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Tbd_0770 42b61b46689d33e8040dd9cc9433194d 430 Pfam PF02646 RmuC family 139 416 9.6E-65 T 11-10-2018 IPR003798 DNA recombination RmuC Tbd_0770 42b61b46689d33e8040dd9cc9433194d 430 Gene3D G3DSA:1.20.120.20 41 196 5.2E-5 T 11-10-2018 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 3.5E-20 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 Gene3D G3DSA:2.60.300.12 10 116 5.2E-34 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 SUPERFAMILY SSF89360 10 102 1.9E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 6.7E-39 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Tbd_0456 fe0806b2a2d9515b1c3b1fdc37c32795 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.849 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Tbd_0407 ecf09ef3fa1b91077db64932ad2a947e 101 SUPERFAMILY SSF54189 5 95 6.83E-30 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0407 ecf09ef3fa1b91077db64932ad2a947e 101 Pfam PF00276 Ribosomal protein L23 11 97 9.2E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tbd_0407 ecf09ef3fa1b91077db64932ad2a947e 101 Gene3D G3DSA:3.30.70.330 3 101 1.2E-34 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Tbd_0407 ecf09ef3fa1b91077db64932ad2a947e 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 100 21.638 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 9 193 25.796 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 SUPERFAMILY SSF110997 211 283 1.31E-8 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 Gene3D G3DSA:2.40.40.10 100 194 8.2E-39 T 11-10-2018 IPR036908 RlpA-like domain superfamily Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 103 196 1.5E-43 T 11-10-2018 IPR012997 Rare lipoprotein A Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 Pfam PF03330 Lytic transglycolase 102 190 1.6E-27 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 Pfam PF05036 Sporulation related domain 210 283 1.7E-10 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 Gene3D G3DSA:3.30.70.1070 212 283 7.3E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_0265 d20375c752fcde8550288fb8988e50d1 286 SUPERFAMILY SSF50685 89 190 3.38E-11 T 11-10-2018 IPR036908 RlpA-like domain superfamily Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 SUPERFAMILY SSF47384 208 280 3.14E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 SMART SM00388 224 285 6.3E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 SUPERFAMILY SSF55874 288 430 1.57E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 427 2.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 Gene3D G3DSA:1.10.287.130 170 280 3.1E-15 T 11-10-2018 Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 Gene3D G3DSA:3.30.565.10 288 432 1.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1288 d6d17839a15c13d3333adc66aa5932e2 432 SMART SM00387 321 430 6.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0179 879a6b55f54439cc2a2521c3fdd8354c 359 Pfam PF13717 zinc-ribbon domain 4 37 2.0E-8 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative Tbd_0179 879a6b55f54439cc2a2521c3fdd8354c 359 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 3 39 5.0E-7 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative Tbd_0179 879a6b55f54439cc2a2521c3fdd8354c 359 Pfam PF11906 Protein of unknown function (DUF3426) 214 356 6.3E-39 T 11-10-2018 IPR021834 Protein of unknown function DUF3426 Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 Pfam PF16331 TolA binding protein trimerisation 49 120 1.4E-20 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 261 1.4E-38 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 Gene3D G3DSA:1.20.5.110 46 123 9.4E-9 T 11-10-2018 Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 Gene3D G3DSA:1.25.40.10 145 265 3.6E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 7 264 20.635 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 Pfam PF13525 Outer membrane lipoprotein 142 249 6.8E-12 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Tbd_2204 4132c7a005093b7856c7530dd3b3cd3a 265 SUPERFAMILY SSF48452 148 253 3.54E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 7.1E-40 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-39 T 11-10-2018 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.895 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 SUPERFAMILY SSF47060 4 89 1.09E-35 T 11-10-2018 IPR009068 S15/NS1, RNA-binding Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 Pfam PF00312 Ribosomal protein S15 8 88 8.8E-38 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 SMART SM01387 8 88 8.0E-53 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0694 7f449001d5aaa7d0ec4e23bbf4ecac2d 89 Gene3D G3DSA:1.10.287.10 1 89 1.2E-35 T 11-10-2018 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Pfam PF10531 SLBB domain 105 149 2.6E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Pfam PF10531 SLBB domain 189 239 3.4E-11 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 98 8.9E-20 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Gene3D G3DSA:3.10.560.10 187 261 5.5E-12 T 11-10-2018 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Gene3D G3DSA:3.10.560.10 99 186 6.7E-17 T 11-10-2018 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 Gene3D G3DSA:3.30.1950.10 31 98 3.4E-13 T 11-10-2018 Tbd_1795 83b9bf68e01f2723aa7506733287e873 264 TIGRFAM TIGR03028 EpsE: polysaccharide export protein EpsE 26 264 1.5E-127 T 11-10-2018 IPR017478 Polysaccharide export EpsE Tbd_2669 2cf4a573d4cfe15090fe0fdb7a644d03 250 Pfam PF12048 Protein of unknown function (DUF3530) 57 117 5.7E-11 T 11-10-2018 IPR022529 Protein of unknown function DUF3530 Tbd_2669 2cf4a573d4cfe15090fe0fdb7a644d03 250 SUPERFAMILY SSF53474 48 249 1.13E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2669 2cf4a573d4cfe15090fe0fdb7a644d03 250 Gene3D G3DSA:3.40.50.1820 51 250 3.7E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0970 c5894809804f41aa181922127e838591 432 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 362 393 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site Tbd_0970 c5894809804f41aa181922127e838591 432 Gene3D G3DSA:2.40.50.140 3 73 3.0E-22 T 11-10-2018 Tbd_0970 c5894809804f41aa181922127e838591 432 Pfam PF01938 TRAM domain 5 50 1.7E-7 T 11-10-2018 IPR002792 TRAM domain Tbd_0970 c5894809804f41aa181922127e838591 432 SUPERFAMILY SSF53335 62 432 7.86E-82 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0970 c5894809804f41aa181922127e838591 432 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 261 431 1.6E-16 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Tbd_0970 c5894809804f41aa181922127e838591 432 Gene3D G3DSA:3.40.1350.30 121 263 8.1E-104 T 11-10-2018 Tbd_0970 c5894809804f41aa181922127e838591 432 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 4 432 70.172 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Tbd_0970 c5894809804f41aa181922127e838591 432 SUPERFAMILY SSF50249 4 59 3.94E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0970 c5894809804f41aa181922127e838591 432 Gene3D G3DSA:3.40.50.150 74 427 8.1E-104 T 11-10-2018 Tbd_1034 d8a25c36078a0b8b93856478eceb694d 111 SUPERFAMILY SSF46785 6 102 1.09E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1034 d8a25c36078a0b8b93856478eceb694d 111 Gene3D G3DSA:1.10.10.10 1 109 1.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1034 d8a25c36078a0b8b93856478eceb694d 111 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 9.7E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_0583 1ab845bf18291f2d455ffe4e8b7668e6 276 PIRSF PIRSF012318 5 276 1.0E-94 T 11-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 Tbd_0583 1ab845bf18291f2d455ffe4e8b7668e6 276 SUPERFAMILY SSF47240 78 235 6.69E-13 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_0583 1ab845bf18291f2d455ffe4e8b7668e6 276 Pfam PF04305 Protein of unknown function (DUF455) 20 263 1.2E-95 T 11-10-2018 IPR007402 Protein of unknown function DUF455 Tbd_2049 2c0a07566416eb05daadcc8edfda51c8 245 Gene3D G3DSA:3.40.50.300 2 240 1.9E-53 T 11-10-2018 Tbd_2049 2c0a07566416eb05daadcc8edfda51c8 245 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2049 2c0a07566416eb05daadcc8edfda51c8 245 SUPERFAMILY SSF52540 11 226 1.13E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2049 2c0a07566416eb05daadcc8edfda51c8 245 Pfam PF00005 ABC transporter 25 164 8.9E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2049 2c0a07566416eb05daadcc8edfda51c8 245 SMART SM00382 33 212 1.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0579 141cda49e91545420dc124ee22e723bd 143 Gene3D G3DSA:3.40.50.10110 1 138 2.2E-39 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Tbd_0579 141cda49e91545420dc124ee22e723bd 143 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 132 1.6E-35 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Tbd_0579 141cda49e91545420dc124ee22e723bd 143 SUPERFAMILY SSF102400 2 137 1.57E-41 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Tbd_1320 5b7f3b27e546553f6f04c21757128b40 181 Gene3D G3DSA:2.130.10.10 22 181 7.7E-31 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1320 5b7f3b27e546553f6f04c21757128b40 181 SUPERFAMILY SSF50974 30 179 7.32E-32 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 SUPERFAMILY SSF141868 514 743 1.31E-56 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 484 1.2E-38 T 11-10-2018 IPR000160 GGDEF domain Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 Gene3D G3DSA:3.30.70.270 310 484 2.5E-48 T 11-10-2018 Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 SMART SM00052 498 740 2.5E-40 T 11-10-2018 IPR001633 EAL domain Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 Gene3D G3DSA:3.20.20.450 501 750 1.1E-61 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 482 6.0E-40 T 11-10-2018 IPR000160 GGDEF domain Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 SMART SM00267 313 486 1.1E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 SUPERFAMILY SSF55073 329 488 5.57E-43 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0995 694ec37993f73838d4018bd4fb2bef7d 762 Pfam PF00563 EAL domain 505 735 2.6E-59 T 11-10-2018 IPR001633 EAL domain Tbd_2562 9ca26c5e1116d34eb098852292fae0a3 291 SUPERFAMILY SSF51735 2 283 6.68E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2562 9ca26c5e1116d34eb098852292fae0a3 291 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 206 1.6E-11 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_2562 9ca26c5e1116d34eb098852292fae0a3 291 Gene3D G3DSA:3.40.50.720 1 287 2.6E-68 T 11-10-2018 Tbd_1979 c90476bb0ee5a2791afb1b8767c205b2 197 Pfam PF03358 NADPH-dependent FMN reductase 12 140 1.7E-6 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tbd_1979 c90476bb0ee5a2791afb1b8767c205b2 197 Gene3D G3DSA:3.40.50.360 1 197 6.5E-59 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_1979 c90476bb0ee5a2791afb1b8767c205b2 197 SUPERFAMILY SSF52218 1 195 7.71E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_1979 c90476bb0ee5a2791afb1b8767c205b2 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 3.2E-44 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Tbd_1578 cdddc18e8c35058b332dbc8712a68000 529 Pfam PF05977 Transmembrane secretion effector 8 527 2.8E-187 T 11-10-2018 IPR010290 Transmembrane secretion effector Tbd_1578 cdddc18e8c35058b332dbc8712a68000 529 SUPERFAMILY SSF103473 15 401 5.62E-51 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1578 cdddc18e8c35058b332dbc8712a68000 529 Gene3D G3DSA:1.20.1250.20 11 399 2.5E-41 T 11-10-2018 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 Gene3D G3DSA:1.10.150.240 26 93 1.3E-55 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 Gene3D G3DSA:3.40.50.1000 14 211 1.3E-55 T 11-10-2018 IPR023214 HAD superfamily Tbd_0945 b8280aea8be1263015149a625b7b1422 226 SUPERFAMILY SSF56784 11 224 5.47E-57 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0945 b8280aea8be1263015149a625b7b1422 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 216 5.7E-57 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 191 1.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 9.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 9.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 9.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 192 7.1E-30 T 11-10-2018 Tbd_0945 b8280aea8be1263015149a625b7b1422 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 188 3.4E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_1873 26714b0d955432c2f0a62001565e18c4 306 SUPERFAMILY SSF51735 1 305 3.81E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1873 26714b0d955432c2f0a62001565e18c4 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 220 2.1E-33 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1873 26714b0d955432c2f0a62001565e18c4 306 Gene3D G3DSA:3.40.50.720 1 306 4.9E-68 T 11-10-2018 Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 187 1.1E-42 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 244 336 6.4E-16 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 SUPERFAMILY SSF52540 5 200 9.07E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 Gene3D G3DSA:3.40.50.300 5 205 6.3E-56 T 11-10-2018 Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 Gene3D G3DSA:3.30.1220.10 230 338 1.2E-17 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 SMART SM00833 244 338 2.0E-22 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Tbd_2534 375d65e38b288e0fdcc9383bc9171bc9 349 SUPERFAMILY SSF90002 244 336 1.83E-18 T 11-10-2018 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 SUPERFAMILY SSF102114 15 267 1.57E-48 T 11-10-2018 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 SMART SM00729 24 251 3.2E-39 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 Pfam PF16199 Radical_SAM C-terminal domain 212 294 6.1E-24 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 Pfam PF04055 Radical SAM superfamily 44 199 1.7E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 304 2.7E-106 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 Tbd_2187 53ad8cef4185c3aac07a3b82c64333da 316 Gene3D G3DSA:3.80.30.20 46 264 3.7E-13 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_0749 12eee683fb374196710ca33b06dad45b 418 Pfam PF09967 VWA-like domain (DUF2201) 293 417 6.4E-26 T 11-10-2018 IPR018698 VWA-like domain Tbd_0749 12eee683fb374196710ca33b06dad45b 418 SUPERFAMILY SSF53300 288 393 1.82E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0749 12eee683fb374196710ca33b06dad45b 418 Pfam PF13203 Putative metallopeptidase domain 15 278 5.2E-45 T 11-10-2018 IPR025154 Putative metallopeptidase domain Tbd_0451 6d1585c4e5f585f0858d8df18db17de4 138 SUPERFAMILY SSF82784 1 136 7.72E-41 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Tbd_0451 6d1585c4e5f585f0858d8df18db17de4 138 Gene3D G3DSA:3.30.300.20 39 136 1.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0451 6d1585c4e5f585f0858d8df18db17de4 138 Gene3D G3DSA:2.20.25.10 1 33 1.2E-12 T 11-10-2018 Tbd_0451 6d1585c4e5f585f0858d8df18db17de4 138 Pfam PF02566 OsmC-like protein 33 130 1.2E-17 T 11-10-2018 IPR003718 OsmC/Ohr family Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 Pfam PF00155 Aminotransferase class I and II 42 381 1.2E-57 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 386 48.537 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 SUPERFAMILY SSF53383 10 385 1.18E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 382 2.4E-129 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 Gene3D G3DSA:3.90.1150.10 43 380 1.4E-118 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0320 6665192a0081480db99fe4dd332c9cab 386 Gene3D G3DSA:3.40.640.10 59 287 1.4E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0478 0b4326f5d78bf9e769e2769baa8fbaf0 199 Gene3D G3DSA:3.90.950.10 1 196 5.5E-75 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_0478 0b4326f5d78bf9e769e2769baa8fbaf0 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 192 1.5E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tbd_0478 0b4326f5d78bf9e769e2769baa8fbaf0 199 SUPERFAMILY SSF52972 1 194 1.49E-70 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tbd_0478 0b4326f5d78bf9e769e2769baa8fbaf0 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 194 49.088 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Tbd_0478 0b4326f5d78bf9e769e2769baa8fbaf0 199 Pfam PF01725 Ham1 family 4 190 2.7E-55 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tbd_1163 9920fd810e4dbc0a9be87b4d7ab9eae8 153 Pfam PF02082 Transcriptional regulator 1 83 8.2E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_1163 9920fd810e4dbc0a9be87b4d7ab9eae8 153 SUPERFAMILY SSF46785 2 133 2.0E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1163 9920fd810e4dbc0a9be87b4d7ab9eae8 153 Gene3D G3DSA:1.10.10.10 1 143 9.8E-52 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1163 9920fd810e4dbc0a9be87b4d7ab9eae8 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 5.1E-45 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_1163 9920fd810e4dbc0a9be87b4d7ab9eae8 153 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.6E-65 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Pfam PF02824 TGS domain 413 472 7.8E-17 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Pfam PF13328 HD domain 51 200 1.5E-53 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Pfam PF04607 Region found in RelA / SpoT proteins 260 369 1.9E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SUPERFAMILY SSF55021 649 726 5.73E-10 T 11-10-2018 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SUPERFAMILY SSF81271 400 472 6.54E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 51 723 3.8E-235 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Pfam PF13291 ACT domain 648 725 3.4E-18 T 11-10-2018 IPR002912 ACT domain Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Gene3D G3DSA:3.10.20.30 406 480 1.8E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SUPERFAMILY SSF109604 32 215 8.16E-73 T 11-10-2018 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Gene3D G3DSA:3.30.70.260 648 733 7.1E-14 T 11-10-2018 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SMART SM00471 66 178 1.3E-7 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Gene3D G3DSA:3.30.460.10 218 349 1.7E-46 T 11-10-2018 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SMART SM00954 260 370 1.1E-62 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 Gene3D G3DSA:1.10.3210.10 28 215 4.5E-80 T 11-10-2018 Tbd_0471 3f647a51ed6d2c55d9f88970dce2e18e 738 SUPERFAMILY SSF81301 206 417 2.94E-61 T 11-10-2018 Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 78 89 2.1E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 2.1E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 2.1E-12 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 48 286 3.3E-50 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 SUPERFAMILY SSF56601 8 301 3.97E-62 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0083 0059fc2f76f2fcb7fc2ce79f2c1cd84e 321 Gene3D G3DSA:3.40.710.10 27 319 8.2E-67 T 11-10-2018 Tbd_0418 fcb0d7f880d25637edfb9955cfd70a43 101 SUPERFAMILY SSF57716 2 101 6.49E-37 T 11-10-2018 Tbd_0418 fcb0d7f880d25637edfb9955cfd70a43 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.228 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Tbd_0418 fcb0d7f880d25637edfb9955cfd70a43 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 9.1E-26 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0418 fcb0d7f880d25637edfb9955cfd70a43 101 Gene3D G3DSA:4.10.830.10 40 101 1.7E-22 T 11-10-2018 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 SUPERFAMILY SSF55347 150 314 4.17E-73 T 11-10-2018 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 9.1E-134 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.2E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.2E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.2E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.2E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.2E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 314 3.6E-65 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 8.0E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 PIRSF PIRSF000149 1 333 3.6E-131 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 Gene3D G3DSA:3.30.360.10 150 316 5.3E-149 T 11-10-2018 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 Gene3D G3DSA:3.40.50.720 4 327 5.3E-149 T 11-10-2018 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 SMART SM00846 3 151 1.7E-98 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0160 a35fe380bc861e0fae39565cb0fe7591 333 SUPERFAMILY SSF51735 3 167 1.7E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Gene3D G3DSA:3.40.50.300 4 167 2.1E-40 T 11-10-2018 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 SUPERFAMILY SSF52540 138 434 4.5E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Pfam PF01926 50S ribosome-binding GTPase 177 295 1.5E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Pfam PF01926 50S ribosome-binding GTPase 5 120 4.5E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 351 431 2.3E-24 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 431 3.6E-166 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Gene3D G3DSA:3.30.300.20 351 433 1.1E-19 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 2.6E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.6E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Gene3D G3DSA:3.40.50.300 175 346 1.7E-47 T 11-10-2018 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 PIRSF PIRSF006485 1 440 5.2E-166 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 SUPERFAMILY SSF52540 3 167 2.64E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 SMART SM00382 1 117 1.8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 SMART SM00382 174 315 0.5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 5.2E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 342 4.4E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tbd_0598 1a5949c014c0f2ab6d42c31981ddc494 469 Hamap MF_00195 GTPase Der [der]. 2 434 37.223 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 Gene3D G3DSA:3.40.50.1360 7 212 3.1E-76 T 11-10-2018 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 48 212 4.3E-60 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 Gene3D G3DSA:3.30.70.260 124 195 3.1E-76 T 11-10-2018 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 213 9.8E-67 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 SUPERFAMILY SSF75445 126 197 1.57E-24 T 11-10-2018 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 216 32.932 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Tbd_2364 21717270e6d02f5dc773279b8b6bcf97 218 SUPERFAMILY SSF100950 1 145 1.0E-44 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Tbd_1426 69a1a86af8356260d35d96a2ecd31aee 366 Gene3D G3DSA:1.20.1530.20 20 351 2.4E-18 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_1426 69a1a86af8356260d35d96a2ecd31aee 366 Pfam PF01758 Sodium Bile acid symporter family 68 262 4.0E-33 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Tbd_1426 69a1a86af8356260d35d96a2ecd31aee 366 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 22 349 1.7E-113 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tbd_1426 69a1a86af8356260d35d96a2ecd31aee 366 PIRSF PIRSF005508 5 361 2.7E-114 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 PIRSF PIRSF019422 3 398 7.1E-139 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 Gene3D G3DSA:2.40.40.10 53 388 8.2E-127 T 11-10-2018 IPR036908 RlpA-like domain superfamily Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 Gene3D G3DSA:2.40.240.50 132 297 8.2E-127 T 11-10-2018 Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 Pfam PF06725 3D domain 313 386 1.7E-24 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 SMART SM00925 133 292 1.4E-94 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 SUPERFAMILY SSF50685 48 390 1.74E-137 T 11-10-2018 IPR036908 RlpA-like domain superfamily Tbd_2232 3e24956e04e59197fd1d1ed9ac4fdc06 400 Pfam PF03562 MltA specific insert domain 59 292 2.8E-87 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 Tbd_1772 7b13548f698b60668f54a46f3d8aa43b 238 Gene3D G3DSA:1.20.1540.10 38 232 4.4E-32 T 11-10-2018 IPR035952 Rhomboid-like superfamily Tbd_1772 7b13548f698b60668f54a46f3d8aa43b 238 SUPERFAMILY SSF144091 40 230 6.8E-41 T 11-10-2018 Tbd_1772 7b13548f698b60668f54a46f3d8aa43b 238 Pfam PF01694 Rhomboid family 83 230 3.0E-30 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Tbd_2636 eedd09c806741e5a951d96e930292c84 773 SMART SM00327 578 772 3.5E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_2636 eedd09c806741e5a951d96e930292c84 773 Pfam PF00092 von Willebrand factor type A domain 581 731 3.2E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_2636 eedd09c806741e5a951d96e930292c84 773 Gene3D G3DSA:3.40.50.410 578 769 5.7E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_2636 eedd09c806741e5a951d96e930292c84 773 SUPERFAMILY SSF53300 579 768 8.74E-21 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 179 1.6E-49 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 Gene3D G3DSA:3.30.70.580 1 67 3.8E-21 T 11-10-2018 Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 SUPERFAMILY SSF55120 3 179 3.04E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 Pfam PF00849 RNA pseudouridylate synthase 4 148 7.8E-13 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0853 ca871d02a024acef1704d4b112b1d178 180 Gene3D G3DSA:3.30.70.1560 68 168 1.6E-37 T 11-10-2018 Tbd_0607 663764ee1f365f58508d317b7b361621 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 430 1.3E-180 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0607 663764ee1f365f58508d317b7b361621 432 Gene3D G3DSA:3.40.440.10 7 250 3.2E-101 T 11-10-2018 Tbd_0607 663764ee1f365f58508d317b7b361621 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 134 145 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0607 663764ee1f365f58508d317b7b361621 432 SUPERFAMILY SSF52540 4 430 1.38E-178 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0607 663764ee1f365f58508d317b7b361621 432 Pfam PF00709 Adenylosuccinate synthetase 6 424 1.2E-179 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0607 663764ee1f365f58508d317b7b361621 432 Gene3D G3DSA:1.10.300.10 103 202 3.2E-101 T 11-10-2018 Tbd_0607 663764ee1f365f58508d317b7b361621 432 Gene3D G3DSA:3.90.170.10 268 432 8.2E-68 T 11-10-2018 Tbd_0607 663764ee1f365f58508d317b7b361621 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 214.743 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0607 663764ee1f365f58508d317b7b361621 432 SMART SM00788 5 425 2.4E-297 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0607 663764ee1f365f58508d317b7b361621 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 12 19 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tbd_0167 62e1460ec1840cd2a803aecebb471cd8 130 SUPERFAMILY SSF52833 48 128 1.84E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0167 62e1460ec1840cd2a803aecebb471cd8 130 Gene3D G3DSA:3.40.30.10 44 130 2.5E-12 T 11-10-2018 Tbd_0167 62e1460ec1840cd2a803aecebb471cd8 130 Pfam PF13417 Glutathione S-transferase, N-terminal domain 51 128 1.3E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Tbd_2546 dde05d643fc881b730c72ec10e13bc4b 610 SUPERFAMILY SSF48452 51 246 2.88E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2546 dde05d643fc881b730c72ec10e13bc4b 610 Gene3D G3DSA:1.25.40.10 32 359 4.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0759 1aabf2a7135c7d78cf3ae3a2948bc067 907 Gene3D G3DSA:2.60.40.740 205 333 6.5E-5 T 11-10-2018 Tbd_0759 1aabf2a7135c7d78cf3ae3a2948bc067 907 Pfam PF01345 Domain of unknown function DUF11 206 295 7.2E-18 T 11-10-2018 IPR001434 Domain of unknown function DUF11 Tbd_0759 1aabf2a7135c7d78cf3ae3a2948bc067 907 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 208 260 8.0E-12 T 11-10-2018 IPR001434 Domain of unknown function DUF11 Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 Pfam PF13537 Glutamine amidotransferase domain 47 165 2.7E-44 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 Pfam PF00733 Asparagine synthase 241 585 4.2E-83 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 PIRSF PIRSF001589 1 588 2.2E-194 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 SUPERFAMILY SSF52402 231 570 3.98E-72 T 11-10-2018 Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 Gene3D G3DSA:3.60.20.10 6 221 3.1E-60 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 SUPERFAMILY SSF56235 1 223 4.8E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 587 8.4E-304 T 11-10-2018 IPR017535 Asparagine synthase family amidotransferase Tbd_0060 76f8949fd6bb59ede3869ae63dcdbdf1 588 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 518 6.9E-134 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 SUPERFAMILY SSF54423 26 81 1.31E-13 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 Gene3D G3DSA:3.10.450.70 18 83 3.9E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 Gene3D G3DSA:3.40.30.10 99 236 6.0E-41 T 11-10-2018 Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 SUPERFAMILY SSF52833 93 232 7.23E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 79 1.1E-20 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Tbd_2331 ccf1cdf8888e0d6026b4fad0bdfef6a6 236 Pfam PF13098 Thioredoxin-like domain 107 231 1.1E-30 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_1142 791f63b766d12929c83641a46d0c2185 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 117 1.1E-39 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1142 791f63b766d12929c83641a46d0c2185 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.162 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Tbd_1142 791f63b766d12929c83641a46d0c2185 118 Gene3D G3DSA:1.20.58.1610 1 118 1.1E-44 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0571 04bff8d4edcc7323449c5cc3f5d11051 231 Pfam PF13247 4Fe-4S dicluster domain 67 166 4.1E-23 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0571 04bff8d4edcc7323449c5cc3f5d11051 231 Gene3D G3DSA:3.30.70.20 35 230 1.1E-58 T 11-10-2018 Tbd_0571 04bff8d4edcc7323449c5cc3f5d11051 231 Gene3D G3DSA:3.30.70.20 1 34 4.2E-6 T 11-10-2018 Tbd_0571 04bff8d4edcc7323449c5cc3f5d11051 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0571 04bff8d4edcc7323449c5cc3f5d11051 231 SUPERFAMILY SSF54862 1 200 5.13E-66 T 11-10-2018 Tbd_0680 793a332738576c19e933d9b1ee072034 202 Gene3D G3DSA:3.10.640.10 21 202 1.6E-76 T 11-10-2018 IPR038590 YaeQ superfamily Tbd_0680 793a332738576c19e933d9b1ee072034 202 SUPERFAMILY SSF52980 24 199 4.29E-73 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tbd_0680 793a332738576c19e933d9b1ee072034 202 SMART SM01322 23 197 5.4E-120 T 11-10-2018 IPR009822 YaeQ Tbd_0680 793a332738576c19e933d9b1ee072034 202 Pfam PF07152 YaeQ protein 23 194 8.1E-78 T 11-10-2018 IPR009822 YaeQ Tbd_0680 793a332738576c19e933d9b1ee072034 202 PIRSF PIRSF011484 23 201 2.6E-72 T 11-10-2018 IPR009822 YaeQ Tbd_2192 4072bfeddcd3e0192938546b8fc7822f 145 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 132 1.4E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tbd_2192 4072bfeddcd3e0192938546b8fc7822f 145 Gene3D G3DSA:1.10.940.10 1 138 1.8E-41 T 11-10-2018 IPR035926 NusB-like superfamily Tbd_2192 4072bfeddcd3e0192938546b8fc7822f 145 Pfam PF01029 NusB family 8 130 9.9E-33 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tbd_2192 4072bfeddcd3e0192938546b8fc7822f 145 SUPERFAMILY SSF48013 4 134 1.57E-39 T 11-10-2018 IPR035926 NusB-like superfamily Tbd_2192 4072bfeddcd3e0192938546b8fc7822f 145 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 134 20.794 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tbd_1582 9f01292414783854d78e9b2d2564ec67 793 Pfam PF02687 FtsX-like permease family 693 782 3.3E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_1582 9f01292414783854d78e9b2d2564ec67 793 Pfam PF02687 FtsX-like permease family 298 391 4.7E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_0664 0013b08e8986cd2a2ab5f55926eb96c5 216 SUPERFAMILY SSF54631 57 192 1.46E-11 T 11-10-2018 Tbd_0664 0013b08e8986cd2a2ab5f55926eb96c5 216 Gene3D G3DSA:3.10.580.10 58 203 1.8E-11 T 11-10-2018 Tbd_0664 0013b08e8986cd2a2ab5f55926eb96c5 216 Pfam PF00571 CBS domain 69 109 3.6E-5 T 11-10-2018 IPR000644 CBS domain Tbd_0490 0123b240926456b1588d9383e806fb19 252 Pfam PF01145 SPFH domain / Band 7 family 24 192 7.9E-35 T 11-10-2018 IPR001107 Band 7 domain Tbd_0490 0123b240926456b1588d9383e806fb19 252 SUPERFAMILY SSF117892 50 183 3.4E-43 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Tbd_0490 0123b240926456b1588d9383e806fb19 252 SMART SM00244 19 176 3.4E-59 T 11-10-2018 IPR001107 Band 7 domain Tbd_0490 0123b240926456b1588d9383e806fb19 252 Gene3D G3DSA:3.30.479.30 47 178 7.0E-46 T 11-10-2018 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 152 170 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 196 219 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 26 48 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 171 192 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 128 151 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 73 94 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0490 0123b240926456b1588d9383e806fb19 252 PRINTS PR00721 Stomatin signature 108 125 3.3E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Tbd_0310 66fb86f5045e51e852ae002f692ccc17 270 Gene3D G3DSA:3.20.20.370 15 248 7.0E-58 T 11-10-2018 Tbd_0310 66fb86f5045e51e852ae002f692ccc17 270 SUPERFAMILY SSF88713 43 263 3.25E-39 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tbd_0310 66fb86f5045e51e852ae002f692ccc17 270 Pfam PF01522 Polysaccharide deacetylase 78 211 1.2E-27 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tbd_1925 beccee2d8681f61cb8328a96bc1f6318 178 Gene3D G3DSA:2.30.110.10 2 176 8.2E-51 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_1925 beccee2d8681f61cb8328a96bc1f6318 178 SMART SM00903 13 165 5.4E-21 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tbd_1925 beccee2d8681f61cb8328a96bc1f6318 178 SUPERFAMILY SSF50475 5 172 9.32E-43 T 11-10-2018 Tbd_1925 beccee2d8681f61cb8328a96bc1f6318 178 Pfam PF01613 Flavin reductase like domain 17 161 2.7E-24 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tbd_1473 f3e02e265bc0b599d63bf90cb1427bc0 273 Gene3D G3DSA:3.60.10.10 8 240 1.5E-45 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_1473 f3e02e265bc0b599d63bf90cb1427bc0 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 229 6.9E-13 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tbd_1473 f3e02e265bc0b599d63bf90cb1427bc0 273 SUPERFAMILY SSF56219 5 240 6.81E-40 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 94 8.9E-43 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 29.736 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 Gene3D G3DSA:4.10.520.10 2 97 5.8E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 SMART SM00411 4 93 1.3E-39 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 Pfam PF00216 Bacterial DNA-binding protein 4 92 3.7E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.3E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.3E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.3E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1013 02bcc9088b08698eec1714df7b5e0213 103 SUPERFAMILY SSF47729 4 94 3.09E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_0905 7ba457bdc0d3bf4a8ba458dbfe7d56e2 169 SUPERFAMILY SSF103247 37 163 8.89E-23 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_0905 7ba457bdc0d3bf4a8ba458dbfe7d56e2 169 Gene3D G3DSA:3.30.310.70 33 162 4.5E-16 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_0905 7ba457bdc0d3bf4a8ba458dbfe7d56e2 169 Pfam PF03625 Domain of unknown function DUF302 68 129 8.7E-15 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_2306 7d33141e0b1563d87fd31463b19c4455 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 16 142 6.2E-19 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Tbd_2306 7d33141e0b1563d87fd31463b19c4455 157 SUPERFAMILY SSF55961 11 142 2.02E-30 T 11-10-2018 Tbd_2306 7d33141e0b1563d87fd31463b19c4455 157 Gene3D G3DSA:3.30.530.20 2 152 2.2E-31 T 11-10-2018 IPR023393 START-like domain superfamily Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 549 1.1E-139 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 Gene3D G3DSA:3.40.50.300 251 551 9.6E-51 T 11-10-2018 Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 Gene3D G3DSA:3.40.50.300 1 214 4.2E-42 T 11-10-2018 Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 508 6.3E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 SUPERFAMILY SSF52540 2 510 2.23E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2030 8c753c6e8b29fab3ed43caa28026ee01 551 PIRSF PIRSF003128 1 551 2.5E-138 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Tbd_0065 1ed253034a00ace4934afe049be0540d 296 SUPERFAMILY SSF103481 41 139 8.11E-12 T 11-10-2018 Tbd_0065 1ed253034a00ace4934afe049be0540d 296 SUPERFAMILY SSF103481 201 285 6.8E-13 T 11-10-2018 Tbd_0065 1ed253034a00ace4934afe049be0540d 296 Pfam PF00892 EamA-like transporter family 10 135 2.5E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_0065 1ed253034a00ace4934afe049be0540d 296 Pfam PF00892 EamA-like transporter family 148 281 1.9E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 Gene3D G3DSA:1.10.8.10 8 94 8.5E-20 T 11-10-2018 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 190 196 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 11 285 42.085 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 28 274 1.4E-68 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 Gene3D G3DSA:3.40.50.150 95 285 3.4E-60 T 11-10-2018 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 33 281 1.0E-88 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 SUPERFAMILY SSF53335 23 265 5.22E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2494 1e14c96b5ce7b0fcc4f7a7253bd4333f 287 Pfam PF05175 Methyltransferase small domain 113 201 8.9E-18 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Tbd_2648 8e833d6cd78c5a25cc29b4412b400322 84 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 81 6.0E-36 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tbd_2648 8e833d6cd78c5a25cc29b4412b400322 84 Gene3D G3DSA:2.40.50.220 1 84 7.6E-33 T 11-10-2018 IPR036677 EutN/Ccml superfamily Tbd_2648 8e833d6cd78c5a25cc29b4412b400322 84 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 2.2E-21 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tbd_2648 8e833d6cd78c5a25cc29b4412b400322 84 TIGRFAM TIGR02703 carboxysome_A: carboxysome peptide A 1 81 1.4E-49 T 11-10-2018 IPR014076 Carboxysome peptide A Tbd_2648 8e833d6cd78c5a25cc29b4412b400322 84 SUPERFAMILY SSF159133 1 81 6.02E-25 T 11-10-2018 IPR036677 EutN/Ccml superfamily Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 7 101 1.7E-28 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 Gene3D G3DSA:3.30.1420.10 6 35 2.1E-7 T 11-10-2018 Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 SUPERFAMILY SSF69721 7 101 9.42E-32 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 Gene3D G3DSA:1.10.10.370 36 102 1.6E-24 T 11-10-2018 Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 Pfam PF04358 DsrC like protein 7 101 2.4E-32 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1408 0f54dcef7809057fd58c0019fb25537d 106 PIRSF PIRSF006223 2 103 2.0E-33 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1464 cb2367482b069570291274158ae20b67 390 SUPERFAMILY SSF56300 78 315 2.21E-26 T 11-10-2018 Tbd_1464 cb2367482b069570291274158ae20b67 390 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 28 309 2.6E-71 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA Tbd_1464 cb2367482b069570291274158ae20b67 390 SMART SM00854 27 309 1.0E-109 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 SUPERFAMILY SSF64484 16 1363 0.0 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:1.10.132.30 641 790 1.2E-63 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:1.10.40.90 374 416 5.9E-20 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:1.10.150.390 1316 1375 1.5E-27 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 9.2E-18 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.1E-87 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:2.40.50.100 1024 1127 3.5E-31 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 394 4.2E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF00623 RNA polymerase Rpb1, domain 2 393 485 2.5E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 3.6E-75 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:2.40.50.100 1152 1215 8.1E-66 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1377 18.887 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 SMART SM00663 235 514 1.5E-183 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.1E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:1.10.274.100 490 640 1.4E-41 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:1.10.1790.20 1136 1314 8.1E-66 T 11-10-2018 Tbd_0399 99b7e61635c3d9f0f1b4f399ca60107d 1398 Gene3D G3DSA:2.40.50.100 948 1023 3.2E-27 T 11-10-2018 Tbd_0213 6d428c7f973b101bb36608d025f7a449 522 SUPERFAMILY SSF56112 89 442 4.82E-42 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_0213 6d428c7f973b101bb36608d025f7a449 522 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 450 5.6E-170 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Tbd_0213 6d428c7f973b101bb36608d025f7a449 522 Pfam PF03109 ABC1 family 109 225 3.1E-35 T 11-10-2018 IPR004147 UbiB domain Tbd_0006 aea95b3181f9ac092ef4d93697e378f3 151 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 93 3.0E-16 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Tbd_0006 aea95b3181f9ac092ef4d93697e378f3 151 SUPERFAMILY SSF50475 5 146 5.61E-33 T 11-10-2018 Tbd_0006 aea95b3181f9ac092ef4d93697e378f3 151 Gene3D G3DSA:2.30.110.10 5 143 6.6E-29 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_1117 dd967fe2fafed600fd0db5ce23d2d4b7 216 SUPERFAMILY SSF52218 14 207 6.52E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_1117 dd967fe2fafed600fd0db5ce23d2d4b7 216 Gene3D G3DSA:3.40.50.360 14 207 6.6E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_1117 dd967fe2fafed600fd0db5ce23d2d4b7 216 Pfam PF02525 Flavodoxin-like fold 14 202 2.1E-37 T 11-10-2018 IPR003680 Flavodoxin-like fold Tbd_1117 dd967fe2fafed600fd0db5ce23d2d4b7 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 13 205 28.002 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 Pfam PF00410 Ribosomal protein S8 5 130 5.1E-50 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 SUPERFAMILY SSF56047 2 130 2.35E-47 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 Gene3D G3DSA:3.30.1370.30 4 77 5.5E-28 T 11-10-2018 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.311 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0419 b523d4dcc892b55d5507752187f9068e 131 Gene3D G3DSA:3.30.1490.10 78 131 9.4E-24 T 11-10-2018 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 Pfam PF13609 Gram-negative porin 7 327 4.2E-63 T 11-10-2018 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 SUPERFAMILY SSF56935 23 362 1.07E-66 T 11-10-2018 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00184 Neisseria sp. porin signature 89 108 5.9E-19 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00184 Neisseria sp. porin signature 53 78 5.9E-19 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00184 Neisseria sp. porin signature 299 323 5.9E-19 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00184 Neisseria sp. porin signature 196 213 5.9E-19 T 11-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 195 207 2.1E-13 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 2.1E-13 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 302 319 2.1E-13 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 2.1E-13 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 91 101 2.1E-13 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Tbd_0448 3af8f6070a40a012a52b6be086b5ac7e 362 Gene3D G3DSA:2.40.160.10 23 362 4.0E-78 T 11-10-2018 IPR023614 Porin domain superfamily Tbd_2209 2b5f21457795d41e3a1266b09d5835e1 231 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 9 229 42.101 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Tbd_2209 2b5f21457795d41e3a1266b09d5835e1 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 3.1E-86 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Tbd_2209 2b5f21457795d41e3a1266b09d5835e1 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 81 212 3.5E-42 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 11 314 40.658 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 12 311 1.0E-89 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 164 311 1.4E-26 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 SUPERFAMILY SSF53671 10 314 2.88E-95 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 86 95 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 48 70 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 269 274 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 293 307 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 143 160 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 228 237 5.8E-30 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 58 65 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 2.4E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 144 155 2.4E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 300 2.4E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 2.4E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 156 7.9E-39 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 Gene3D G3DSA:3.40.50.1370 18 307 3.3E-90 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_2582 15e6abb597518bd8577e4baed3a64098 317 Gene3D G3DSA:3.40.50.1370 144 291 3.3E-90 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 Pfam PF12729 Four helix bundle sensory module for signal transduction 39 215 2.5E-14 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 SMART SM00283 298 545 4.2E-98 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 360 513 1.2E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 SUPERFAMILY SSF58104 265 546 2.22E-78 T 11-10-2018 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 Gene3D G3DSA:1.10.287.950 244 547 7.0E-94 T 11-10-2018 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 423 1.2E-59 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 40 65 1.2E-59 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 1.2E-59 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 1.2E-59 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 502 1.2E-59 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 SMART SM00304 245 297 1.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0660 fedae8d94767b01644dd3fdad8249452 586 Pfam PF00672 HAMP domain 245 292 8.3E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1397 3459d0b38d04b5e1a1618a80f9f1d329 199 Pfam PF05573 NosL 59 186 1.5E-23 T 11-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL Tbd_1397 3459d0b38d04b5e1a1618a80f9f1d329 199 Gene3D G3DSA:3.30.70.2050 141 198 5.7E-9 T 11-10-2018 Tbd_1397 3459d0b38d04b5e1a1618a80f9f1d329 199 SUPERFAMILY SSF160387 82 193 3.66E-26 T 11-10-2018 Tbd_0239 459ba06821c2d32b59c74be097557d70 256 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 256 3.9E-69 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Tbd_0239 459ba06821c2d32b59c74be097557d70 256 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 2 256 1.9E-52 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Tbd_1569 69a388ef71406882aca844d0a25023b3 398 Gene3D G3DSA:3.40.640.10 62 285 2.7E-135 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1569 69a388ef71406882aca844d0a25023b3 398 Gene3D G3DSA:3.90.1150.10 25 392 2.7E-135 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1569 69a388ef71406882aca844d0a25023b3 398 Pfam PF00155 Aminotransferase class I and II 31 392 1.3E-71 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_1569 69a388ef71406882aca844d0a25023b3 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tbd_1569 69a388ef71406882aca844d0a25023b3 398 SUPERFAMILY SSF53383 3 396 8.48E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2762 efe24a715a36643ef0bda0df4b172162 353 Gene3D G3DSA:3.30.1330.40 205 330 1.7E-18 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tbd_2762 efe24a715a36643ef0bda0df4b172162 353 SUPERFAMILY SSF55298 199 328 2.83E-13 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tbd_0542 df8f6a0a7a751f56f76e26e20137f963 236 Gene3D G3DSA:3.30.700.10 7 65 2.2E-5 T 11-10-2018 Tbd_0542 df8f6a0a7a751f56f76e26e20137f963 236 SUPERFAMILY SSF54523 7 120 8.63E-10 T 11-10-2018 Tbd_0542 df8f6a0a7a751f56f76e26e20137f963 236 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 4.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0542 df8f6a0a7a751f56f76e26e20137f963 236 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0542 df8f6a0a7a751f56f76e26e20137f963 236 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Gene3D G3DSA:1.10.8.60 355 437 3.1E-32 T 11-10-2018 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 646 2.1E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 6.0E-22 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SMART SM00382 486 635 5.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SMART SM00382 205 350 1.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SUPERFAMILY SSF81923 1 141 2.62E-58 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SUPERFAMILY SSF52540 436 740 3.94E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 340 3.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Gene3D G3DSA:1.10.1780.10 1 142 1.0E-40 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 5.0E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 5.0E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 5.0E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 5.0E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Gene3D G3DSA:3.40.50.300 166 354 2.1E-65 T 11-10-2018 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Gene3D G3DSA:3.40.50.300 438 650 1.3E-79 T 11-10-2018 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SUPERFAMILY SSF52540 167 420 2.7E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Gene3D G3DSA:1.10.8.60 652 748 5.4E-26 T 11-10-2018 Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 SMART SM01086 652 742 1.6E-31 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Tbd_1237 7be9e9f2ffe0443b595dcc5858106350 750 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 62 5.4E-13 T 11-10-2018 IPR004176 Clp, N-terminal Tbd_0299 5bfee9d80c24a687186f002c75ca061e 307 SUPERFAMILY SSF52540 39 307 1.71E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0299 5bfee9d80c24a687186f002c75ca061e 307 Pfam PF13469 Sulfotransferase family 40 256 2.5E-20 T 11-10-2018 Tbd_0299 5bfee9d80c24a687186f002c75ca061e 307 Gene3D G3DSA:3.40.50.300 92 297 2.1E-30 T 11-10-2018 Tbd_1195 2fdbcc4626feccaeaa7095d4eba01a3a 171 Pfam PF01661 Macro domain 21 133 8.1E-44 T 11-10-2018 IPR002589 Macro domain Tbd_1195 2fdbcc4626feccaeaa7095d4eba01a3a 171 Gene3D G3DSA:3.40.220.10 3 171 1.2E-71 T 11-10-2018 Tbd_1195 2fdbcc4626feccaeaa7095d4eba01a3a 171 SUPERFAMILY SSF52949 5 168 5.55E-62 T 11-10-2018 Tbd_1195 2fdbcc4626feccaeaa7095d4eba01a3a 171 SMART SM00506 4 133 4.7E-49 T 11-10-2018 IPR002589 Macro domain Tbd_1696 bb9b6b81c871b4c1e4ee7cbc8ee32bd0 281 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 16 280 6.7E-104 T 11-10-2018 IPR017827 Hydroxysqualene synthase HpnC MetaCyc: PWY-7072 Tbd_1696 bb9b6b81c871b4c1e4ee7cbc8ee32bd0 281 Pfam PF00494 Squalene/phytoene synthase 18 270 1.2E-62 T 11-10-2018 Tbd_1696 bb9b6b81c871b4c1e4ee7cbc8ee32bd0 281 SUPERFAMILY SSF48576 15 280 1.87E-69 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_1696 bb9b6b81c871b4c1e4ee7cbc8ee32bd0 281 Gene3D G3DSA:1.10.600.10 14 257 1.0E-79 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_1445 4e6c799d313754880236ae3e32b7c9bb 167 Gene3D G3DSA:2.60.40.790 13 167 1.0E-33 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_1445 4e6c799d313754880236ae3e32b7c9bb 167 SUPERFAMILY SSF49764 58 166 2.09E-33 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_1445 4e6c799d313754880236ae3e32b7c9bb 167 Pfam PF00011 Hsp20/alpha crystallin family 68 167 8.3E-23 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 SUPERFAMILY SSF82829 226 311 1.12E-20 T 11-10-2018 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 401 8.5E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 SUPERFAMILY SSF52402 7 226 3.53E-56 T 11-10-2018 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Pfam PF09179 TilS substrate binding domain 240 307 1.9E-15 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Gene3D G3DSA:3.40.50.620 6 224 1.9E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Pfam PF01171 PP-loop family 15 192 3.3E-50 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Gene3D G3DSA:1.20.59.20 225 310 9.7E-15 T 11-10-2018 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 196 7.9E-50 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 SUPERFAMILY SSF56037 315 430 2.88E-27 T 11-10-2018 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Pfam PF11734 TilS substrate C-terminal domain 356 425 1.2E-24 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 299 22.978 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_0589 d6ba04e40602003f0032877c81325eb7 445 SMART SM00977 356 429 1.4E-27 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tbd_1612 da219182f9068135f67ff62f8607f471 262 Pfam PF01311 Bacterial export proteins, family 1 14 246 7.9E-73 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1612 da219182f9068135f67ff62f8607f471 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.9E-33 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1612 da219182f9068135f67ff62f8607f471 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.9E-33 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1612 da219182f9068135f67ff62f8607f471 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.9E-33 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1612 da219182f9068135f67ff62f8607f471 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.9E-33 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1612 da219182f9068135f67ff62f8607f471 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 7.6E-72 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Gene3D G3DSA:1.20.58.760 404 599 8.0E-74 T 11-10-2018 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Gene3D G3DSA:1.10.8.60 325 401 1.0E-27 T 11-10-2018 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Pfam PF06480 FtsH Extracellular 10 86 2.0E-13 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 SUPERFAMILY SSF140990 404 602 6.41E-76 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 602 37.517 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 SUPERFAMILY SSF52540 146 393 3.86E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 SMART SM00382 186 325 4.9E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Pfam PF01434 Peptidase family M41 384 592 2.8E-82 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Gene3D G3DSA:3.40.50.300 139 324 2.7E-70 T 11-10-2018 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 7.7E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 Gene3D G3DSA:2.40.50.920 27 102 1.3E-11 T 11-10-2018 Tbd_1133 1e85183b6a24f6e40529dba6e0e23b62 630 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 593 1.4E-240 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tbd_2278 1f9e1a9b2c15cc3f1e264bdea07a7e86 185 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 76 143 1.9E-14 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tbd_2278 1f9e1a9b2c15cc3f1e264bdea07a7e86 185 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 77 118 8.3E-6 T 11-10-2018 Tbd_2278 1f9e1a9b2c15cc3f1e264bdea07a7e86 185 SUPERFAMILY SSF143120 76 154 3.66E-10 T 11-10-2018 IPR036165 YefM-like superfamily Tbd_2278 1f9e1a9b2c15cc3f1e264bdea07a7e86 185 Gene3D G3DSA:3.40.1620.10 70 113 1.8E-6 T 11-10-2018 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 SUPERFAMILY SSF81301 1 119 2.4E-30 T 11-10-2018 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Hamap MF_01262 CCA-adding enzyme [cca]. 1 398 39.454 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Pfam PF01966 HD domain 227 308 5.5E-7 T 11-10-2018 IPR006674 HD domain Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Pfam PF01743 Poly A polymerase head domain 3 121 1.8E-16 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 SUPERFAMILY SSF81891 122 356 2.49E-48 T 11-10-2018 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 52.778 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 SUPERFAMILY SSF69819 407 542 4.19E-38 T 11-10-2018 IPR036820 Archease domain superfamily Reactome: R-HSA-6784531 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 148 209 7.9E-10 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 ProDom PD012969 UPF0211 RIKEN CDNA ENRICHED MALE FULL-LENGTH LIBRARY ZBTB8OS ADULT C43H8.1 413 541 5.0E-70 T 11-10-2018 IPR023572 Archease domain Reactome: R-HSA-6784531 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Pfam PF01951 Archease protein family (MTH1598/TM1083) 408 542 4.9E-34 T 11-10-2018 IPR023572 Archease domain Reactome: R-HSA-6784531 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Gene3D G3DSA:3.30.460.10 1 121 5.9E-28 T 11-10-2018 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Gene3D G3DSA:1.10.3090.10 122 408 3.5E-35 T 11-10-2018 Tbd_2360 cc8eed034fa699f8c3ff7bd6c361b799 542 Gene3D G3DSA:3.55.10.10 409 542 2.0E-34 T 11-10-2018 IPR036820 Archease domain superfamily Reactome: R-HSA-6784531 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 666 678 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 SUPERFAMILY SSF53756 25 824 0.0 T 11-10-2018 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 Pfam PF00343 Carbohydrate phosphorylase 109 821 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 39 821 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 PIRSF PIRSF000460 26 833 5.6E-218 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 Gene3D G3DSA:3.40.50.2000 28 484 4.6E-203 T 11-10-2018 Tbd_2056 2d1a75ff6c204b370df33c392a394f21 837 Gene3D G3DSA:3.40.50.2000 485 806 2.8E-142 T 11-10-2018 Tbd_1793 80bd16518eb920af41f45f314ce62cc9 296 Gene3D G3DSA:3.40.50.300 33 296 7.3E-46 T 11-10-2018 Tbd_1793 80bd16518eb920af41f45f314ce62cc9 296 SUPERFAMILY SSF52540 126 294 1.02E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1793 80bd16518eb920af41f45f314ce62cc9 296 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 108 294 4.6E-33 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Tbd_1793 80bd16518eb920af41f45f314ce62cc9 296 TIGRFAM TIGR03029 EpsG: chain length determinant protein tyrosine kinase EpsG 23 294 2.9E-100 T 11-10-2018 IPR017479 Tyrosine-protein kinase, chain length determinant protein EpsG Tbd_1793 80bd16518eb920af41f45f314ce62cc9 296 SUPERFAMILY SSF160246 23 100 4.71E-14 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_1275 8cb59dfb86f868547dab78b662fb7650 143 Pfam PF13673 Acetyltransferase (GNAT) domain 24 140 1.1E-25 T 11-10-2018 IPR000182 GNAT domain Tbd_1275 8cb59dfb86f868547dab78b662fb7650 143 Gene3D G3DSA:3.40.630.30 4 143 4.1E-45 T 11-10-2018 Tbd_1275 8cb59dfb86f868547dab78b662fb7650 143 SUPERFAMILY SSF55729 11 140 3.88E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 Pfam PF00459 Inositol monophosphatase family 11 239 6.6E-48 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.2E-23 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.2E-23 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 1.2E-23 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 137 160 1.2E-23 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.2E-23 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 Gene3D G3DSA:3.30.540.10 8 155 7.2E-36 T 11-10-2018 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 SUPERFAMILY SSF56655 15 264 2.75E-62 T 11-10-2018 Tbd_0158 0e0894fff7afc5ad8a4765e9f0b3bc28 268 Gene3D G3DSA:3.40.190.80 156 267 6.1E-23 T 11-10-2018 Tbd_2550 d1155c26460d9b5868cef115928ac145 174 Gene3D G3DSA:2.40.50.180 48 115 1.0E-9 T 11-10-2018 Tbd_2550 d1155c26460d9b5868cef115928ac145 174 Gene3D G3DSA:2.30.30.40 33 117 1.0E-9 T 11-10-2018 Tbd_2550 d1155c26460d9b5868cef115928ac145 174 SUPERFAMILY SSF50341 26 167 1.1E-21 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tbd_2550 d1155c26460d9b5868cef115928ac145 174 Pfam PF01584 CheW-like domain 31 161 1.1E-12 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 237 7.5E-68 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 SUPERFAMILY SSF51351 1 246 5.5E-93 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 Pfam PF00121 Triosephosphate isomerase 4 243 1.9E-90 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 162 172 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 Gene3D G3DSA:3.20.20.70 1 248 3.0E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1140 e9ff7de8c31b8befd3f17b51dbda49cb 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 245 62.007 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 Gene3D G3DSA:3.30.70.1290 24 186 6.5E-41 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 Pfam PF13518 Helix-turn-helix domain 267 301 2.6E-7 T 11-10-2018 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 SUPERFAMILY SSF48295 265 301 5.75E-5 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 SMART SM01321 32 146 2.9E-41 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 Pfam PF01797 Transposase IS200 like 37 143 8.6E-14 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tbd_1966 c03bbd374d4db692824f738a98a6157e 305 SUPERFAMILY SSF143422 24 151 6.15E-25 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tbd_2787 4b9617f0a7ae6175b4cbfd5963be64d2 254 Gene3D G3DSA:3.40.30.10 110 253 1.5E-42 T 11-10-2018 Tbd_2787 4b9617f0a7ae6175b4cbfd5963be64d2 254 Pfam PF13098 Thioredoxin-like domain 120 250 4.5E-17 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_2787 4b9617f0a7ae6175b4cbfd5963be64d2 254 SUPERFAMILY SSF54423 26 83 6.67E-18 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Tbd_2787 4b9617f0a7ae6175b4cbfd5963be64d2 254 SUPERFAMILY SSF52833 99 251 1.31E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2787 4b9617f0a7ae6175b4cbfd5963be64d2 254 Gene3D G3DSA:3.10.450.70 26 95 6.5E-28 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Tbd_0381 7ae325f9e42a0884a1502b4ca851c519 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0381 7ae325f9e42a0884a1502b4ca851c519 83 Pfam PF00037 4Fe-4S binding domain 6 25 2.5E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0381 7ae325f9e42a0884a1502b4ca851c519 83 Gene3D G3DSA:3.30.70.20 2 81 2.8E-34 T 11-10-2018 Tbd_0381 7ae325f9e42a0884a1502b4ca851c519 83 SUPERFAMILY SSF54862 4 75 2.63E-19 T 11-10-2018 Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 Gene3D G3DSA:3.30.70.100 181 269 2.0E-27 T 11-10-2018 Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 Pfam PF00924 Mechanosensitive ion channel 71 271 1.5E-40 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 SUPERFAMILY SSF50182 114 176 1.31E-13 T 11-10-2018 IPR010920 LSM domain superfamily Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 SUPERFAMILY SSF82689 178 281 1.7E-22 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 Gene3D G3DSA:2.30.30.60 129 178 2.0E-17 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Tbd_0499 3cfc856ade4f195a4c029f48265ed0cb 321 SUPERFAMILY SSF82861 19 112 1.7E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 Gene3D G3DSA:1.10.10.10 127 230 1.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 SMART SM00862 153 227 2.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 Gene3D G3DSA:3.40.50.2300 2 126 1.6E-36 T 11-10-2018 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 Pfam PF00072 Response regulator receiver domain 9 119 2.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 SUPERFAMILY SSF46894 129 227 2.44E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.6E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 SUPERFAMILY SSF52172 5 128 1.57E-36 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2611 618441df1c9c3b014ed59f5f153427fe 233 SMART SM00448 7 119 4.1E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1468 10769ce9026e5396fc7cebc639c09ff7 393 SUPERFAMILY SSF53649 53 390 6.11E-52 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_1468 10769ce9026e5396fc7cebc639c09ff7 393 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 59 376 2.5E-20 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Tbd_1468 10769ce9026e5396fc7cebc639c09ff7 393 Gene3D G3DSA:3.40.720.10 47 392 2.1E-35 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tbd_0906 dd5090e4c6e352d04051faab91996112 192 Gene3D G3DSA:2.60.40.200 41 190 1.7E-47 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0906 dd5090e4c6e352d04051faab91996112 192 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 52 185 5.5E-43 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0906 dd5090e4c6e352d04051faab91996112 192 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 174 185 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0906 dd5090e4c6e352d04051faab91996112 192 SUPERFAMILY SSF49329 41 185 1.14E-42 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 Gene3D G3DSA:3.90.25.10 193 336 6.8E-111 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 3.3E-9 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 PRINTS PR01713 Nucleotide sugar epimerase signature 303 320 3.3E-9 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 3.3E-9 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 3.3E-9 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 SUPERFAMILY SSF51735 11 339 2.76E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 Gene3D G3DSA:3.40.50.720 19 324 6.8E-111 T 11-10-2018 Tbd_0099 5e6e242e74957a693dd9506818612bf0 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 264 1.8E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1090 a143a9e39d6041f310c5b63c0590ced7 201 PRINTS PR01003 Flagellar assembly protein FliH signature 31 53 5.6E-8 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1090 a143a9e39d6041f310c5b63c0590ced7 201 PRINTS PR01003 Flagellar assembly protein FliH signature 154 170 5.6E-8 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1090 a143a9e39d6041f310c5b63c0590ced7 201 PRINTS PR01003 Flagellar assembly protein FliH signature 171 196 5.6E-8 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1090 a143a9e39d6041f310c5b63c0590ced7 201 PRINTS PR01003 Flagellar assembly protein FliH signature 126 153 5.6E-8 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1090 a143a9e39d6041f310c5b63c0590ced7 201 Pfam PF02108 Flagellar assembly protein FliH 63 189 8.9E-37 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Tbd_2271 746e98148c0198babea5d416a2475d35 188 SMART SM00448 1 112 7.0E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2271 746e98148c0198babea5d416a2475d35 188 PIRSF PIRSF036382 1 187 1.4E-56 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator Tbd_2271 746e98148c0198babea5d416a2475d35 188 Pfam PF03861 ANTAR domain 131 183 7.6E-15 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Tbd_2271 746e98148c0198babea5d416a2475d35 188 Gene3D G3DSA:1.10.10.10 131 187 4.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2271 746e98148c0198babea5d416a2475d35 188 Gene3D G3DSA:3.40.50.2300 1 129 1.0E-13 T 11-10-2018 Tbd_2271 746e98148c0198babea5d416a2475d35 188 Pfam PF00072 Response regulator receiver domain 3 112 3.8E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2271 746e98148c0198babea5d416a2475d35 188 SMART SM01012 128 183 9.3E-18 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Tbd_2271 746e98148c0198babea5d416a2475d35 188 SUPERFAMILY SSF52172 1 183 1.17E-46 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 PRINTS PR00974 Ribosomal protein S18 family signature 49 59 6.7E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 PRINTS PR00974 Ribosomal protein S18 family signature 59 66 6.7E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 PRINTS PR00974 Ribosomal protein S18 family signature 81 91 6.7E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 PRINTS PR00974 Ribosomal protein S18 family signature 67 81 6.7E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 SUPERFAMILY SSF46911 21 92 2.22E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 53 91 3.0E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 Pfam PF01084 Ribosomal protein S18 39 89 1.2E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 Gene3D G3DSA:4.10.640.10 12 95 9.6E-26 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 23 94 20.45 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2103 c1b94e4cc56483a80d8ca5f49fc95858 95 TIGRFAM TIGR00165 S18: ribosomal protein bS18 26 93 1.7E-32 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 PIRSF PIRSF001365 4 295 5.7E-96 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 292 1.4E-109 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 292 67.158 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 Gene3D G3DSA:3.20.20.70 8 296 1.1E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 3.3E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.3E-35 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.3E-35 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.3E-35 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.3E-35 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 SUPERFAMILY SSF51569 6 295 3.24E-105 T 11-10-2018 Tbd_1098 23418e29f60feedb98a6873463a74b27 296 SMART SM01130 6 294 1.2E-146 T 11-10-2018 IPR002220 DapA-like GO:0016829 Tbd_2552 559a8f3efea28076fed5b221992d085f 130 SUPERFAMILY SSF52172 7 126 1.27E-36 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2552 559a8f3efea28076fed5b221992d085f 130 Gene3D G3DSA:3.40.50.12740 8 130 1.7E-38 T 11-10-2018 Tbd_2552 559a8f3efea28076fed5b221992d085f 130 Pfam PF00072 Response regulator receiver domain 11 123 2.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2552 559a8f3efea28076fed5b221992d085f 130 SMART SM00448 9 122 1.5E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2382 6a3af8a8b42a158d310e36d195758721 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 197 4.0E-55 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tbd_2382 6a3af8a8b42a158d310e36d195758721 200 SMART SM01207 8 189 3.2E-81 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tbd_2382 6a3af8a8b42a158d310e36d195758721 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 20.085 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tbd_2382 6a3af8a8b42a158d310e36d195758721 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 188 1.8E-48 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tbd_2094 5098f354a964e9e5ccab477763ee84f8 185 SUPERFAMILY SSF89069 22 84 7.98E-13 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Tbd_2094 5098f354a964e9e5ccab477763ee84f8 185 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 22 93 5.0E-14 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 Tbd_2094 5098f354a964e9e5ccab477763ee84f8 185 Gene3D G3DSA:1.10.10.880 19 84 1.4E-12 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 236 40.044 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 Gene3D G3DSA:3.40.1180.10 3 238 9.1E-91 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 181 198 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 235 6.2E-79 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 SUPERFAMILY SSF64005 13 231 2.88E-84 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tbd_0789 52da707bcfc6a513317fcff9dd10aba8 245 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 235 4.2E-86 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 27 465 1.5E-130 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 SUPERFAMILY SSF54862 95 352 4.78E-29 T 11-10-2018 Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 Gene3D G3DSA:3.30.70.20 205 287 3.3E-5 T 11-10-2018 Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 Gene3D G3DSA:2.60.40.10 357 472 2.3E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 474 3.0E-22 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 Pfam PF12801 4Fe-4S binding domain 85 127 9.6E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 Pfam PF13746 4Fe-4S dicluster domain 209 322 3.2E-52 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0342 11e4ec37acdacc49e73f1cb379ff38f8 478 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 Gene3D G3DSA:2.30.30.60 267 314 8.0E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 SUPERFAMILY SSF82861 172 249 1.44E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 Gene3D G3DSA:3.30.70.100 321 413 8.9E-13 T 11-10-2018 Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 Pfam PF00924 Mechanosensitive ion channel 208 410 2.3E-38 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 SUPERFAMILY SSF82689 325 410 1.31E-15 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Tbd_2595 7a2cb6e0d567faae17ba8c425eb0ac60 422 SUPERFAMILY SSF50182 251 313 1.18E-14 T 11-10-2018 IPR010920 LSM domain superfamily Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 Gene3D G3DSA:3.40.630.10 152 485 2.9E-100 T 11-10-2018 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 SUPERFAMILY SSF53187 165 481 1.13E-91 T 11-10-2018 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 170 475 1.3E-93 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 PRINTS PR00481 Cytosol aminopeptidase signature 249 266 2.8E-38 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 PRINTS PR00481 Cytosol aminopeptidase signature 330 350 2.8E-38 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 PRINTS PR00481 Cytosol aminopeptidase signature 308 329 2.8E-38 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 PRINTS PR00481 Cytosol aminopeptidase signature 358 373 2.8E-38 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_0656 04b9fbe86d40ea78b822eb12dcf5abf7 486 PRINTS PR00481 Cytosol aminopeptidase signature 271 292 2.8E-38 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Tbd_1297 3762e130d6d5bd367fd22188566c7418 178 Pfam PF05137 Fimbrial assembly protein (PilN) 96 172 5.4E-5 T 11-10-2018 IPR007813 Fimbrial assembly PilN Tbd_1482 e6772601cfe44402a0f30a3a3158d576 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 85 1.5E-13 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_1482 e6772601cfe44402a0f30a3a3158d576 206 Gene3D G3DSA:1.20.120.1760 11 177 1.1E-13 T 11-10-2018 Tbd_1482 e6772601cfe44402a0f30a3a3158d576 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_0218 ae3db3da7339a46d4e56b227428b6811 142 PIRSF PIRSF000714 1 141 7.8E-41 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type Tbd_0218 ae3db3da7339a46d4e56b227428b6811 142 SUPERFAMILY SSF54197 1 135 3.56E-38 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_0218 ae3db3da7339a46d4e56b227428b6811 142 Gene3D G3DSA:3.30.428.10 10 142 6.6E-39 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_0218 ae3db3da7339a46d4e56b227428b6811 142 Pfam PF01230 HIT domain 13 97 2.4E-14 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 SMART SM00981 66 164 4.9E-19 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 Pfam PF02926 THUMP domain 47 163 2.1E-9 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 5.2E-6 T 11-10-2018 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 306 318 5.2E-6 T 11-10-2018 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 150 166 5.2E-6 T 11-10-2018 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 Gene3D G3DSA:3.30.2130.30 15 261 1.2E-124 T 11-10-2018 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 Pfam PF01170 Putative RNA methylase family UPF0020 172 376 3.4E-51 T 11-10-2018 IPR000241 Putative RNA methylase domain Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 SUPERFAMILY SSF53335 158 379 5.29E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 Gene3D G3DSA:3.40.50.150 179 374 1.2E-124 T 11-10-2018 Tbd_2424 e2c1aa6c483bf91f8f79e8b82b324002 398 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 309 315 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 TIGRFAM TIGR03572 WbuZ: glycosyl amidation-associated protein WbuZ 1 230 1.2E-90 T 11-10-2018 IPR020021 Glycosyl amidation-associated protein, WbuZ GO:0016833 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 Gene3D G3DSA:3.20.20.70 1 251 4.9E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 Pfam PF00977 Histidine biosynthesis protein 5 233 1.5E-91 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 49.391 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 2.3E-114 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tbd_1708 380b9b3945a95b6b6ae11e0a6c8767e9 251 SUPERFAMILY SSF51366 1 250 2.28E-87 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_0509 ec5d49682fa93a81a959257e720a140b 134 SUPERFAMILY SSF55174 11 110 8.77E-29 T 11-10-2018 Tbd_0509 ec5d49682fa93a81a959257e720a140b 134 Pfam PF01479 S4 domain 12 57 2.9E-15 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0509 ec5d49682fa93a81a959257e720a140b 134 PIRSF PIRSF016821 9 134 1.3E-41 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 Tbd_0509 ec5d49682fa93a81a959257e720a140b 134 Gene3D G3DSA:3.10.290.10 5 108 2.3E-34 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0509 ec5d49682fa93a81a959257e720a140b 134 SMART SM00363 12 72 3.2E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1280 932cf138b63b55346b862576adf6dbca 411 SUPERFAMILY SSF53383 42 409 1.71E-84 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1280 932cf138b63b55346b862576adf6dbca 411 Gene3D G3DSA:3.90.1150.10 49 401 2.4E-104 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1280 932cf138b63b55346b862576adf6dbca 411 Gene3D G3DSA:3.40.640.10 60 318 2.4E-104 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1280 932cf138b63b55346b862576adf6dbca 411 Pfam PF00266 Aminotransferase class-V 49 396 1.4E-54 T 11-10-2018 IPR000192 Aminotransferase class V domain Tbd_2162 fa69c1900c721af59664c0a0df33cb3d 200 Gene3D G3DSA:3.40.50.150 9 198 1.1E-30 T 11-10-2018 Tbd_2162 fa69c1900c721af59664c0a0df33cb3d 200 SUPERFAMILY SSF53335 9 181 6.39E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2162 fa69c1900c721af59664c0a0df33cb3d 200 Pfam PF13649 Methyltransferase domain 40 133 5.6E-15 T 11-10-2018 Tbd_1240 7616eaf3b98101c204c7029b6db4741b 104 SUPERFAMILY SSF63592 1 98 5.36E-37 T 11-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily Tbd_1240 7616eaf3b98101c204c7029b6db4741b 104 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 24.833 T 11-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Tbd_1240 7616eaf3b98101c204c7029b6db4741b 104 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 101 8.1E-43 T 11-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Tbd_1240 7616eaf3b98101c204c7029b6db4741b 104 Gene3D G3DSA:1.10.4000.10 1 104 9.0E-38 T 11-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily Tbd_1240 7616eaf3b98101c204c7029b6db4741b 104 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 97 7.0E-44 T 11-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 SUPERFAMILY SSF56176 30 227 1.31E-32 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Pfam PF01565 FAD binding domain 46 182 1.0E-16 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 324 86.414 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Gene3D G3DSA:3.30.465.10 112 237 3.5E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 SUPERFAMILY SSF56194 219 322 4.45E-37 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 223 320 4.4E-31 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 33 321 6.0E-55 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Gene3D G3DSA:3.90.78.10 238 324 1.2E-35 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0121 e5333303378ef736e4c51106ec13c86c 324 Gene3D G3DSA:3.30.43.10 15 93 2.9E-15 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 1.9E-102 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 Gene3D G3DSA:3.40.50.300 2 250 2.1E-61 T 11-10-2018 Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 Pfam PF00005 ABC transporter 24 166 1.0E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 SMART SM00382 33 216 6.7E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2274 dcb292cd5a3c3a685f7ed627133b4ef4 265 SUPERFAMILY SSF52540 5 233 4.26E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 9.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 Gene3D G3DSA:1.10.357.10 14 205 3.5E-48 T 11-10-2018 Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 Pfam PF16925 Bacterial transcriptional repressor C-terminal 89 188 4.9E-11 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 SUPERFAMILY SSF48498 88 201 2.62E-22 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_0482 7d47da3945d6c9c63f3c012c01a0f83d 213 SUPERFAMILY SSF46689 10 85 2.05E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 SMART SM00387 308 405 6.5E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 Gene3D G3DSA:3.30.565.10 269 407 3.6E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 Pfam PF07730 Histidine kinase 203 268 2.5E-10 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 SUPERFAMILY SSF55781 34 194 3.05E-19 T 11-10-2018 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 9.3E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 9.3E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 9.3E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 Gene3D G3DSA:3.30.450.40 32 194 9.4E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 SUPERFAMILY SSF55874 271 402 5.5E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 Pfam PF13185 GAF domain 48 187 9.1E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 SMART SM00065 49 196 0.0016 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_2463 e6716808e10c22df7aff273475ee34ff 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 403 2.8E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 Gene3D G3DSA:3.40.190.10 161 262 3.3E-70 T 11-10-2018 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 SUPERFAMILY SSF46785 1 86 6.49E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 Gene3D G3DSA:3.40.190.10 93 291 3.3E-70 T 11-10-2018 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 Gene3D G3DSA:1.10.10.10 1 85 8.4E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 SUPERFAMILY SSF53850 88 295 2.33E-41 T 11-10-2018 Tbd_2323 d49049f379e89a85e634dfe139ecf58a 301 Pfam PF03466 LysR substrate binding domain 90 294 5.8E-46 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 SUPERFAMILY SSF56059 104 306 3.01E-55 T 11-10-2018 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Gene3D G3DSA:3.30.1490.20 119 184 1.7E-74 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Pfam PF01820 D-ala D-ala ligase N-terminus 12 94 7.9E-17 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 PIRSF PIRSF039102 8 56 4.9E-7 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 PIRSF PIRSF039102 49 310 1.6E-83 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 251 279 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 SUPERFAMILY SSF52440 12 104 4.8E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Gene3D G3DSA:3.30.470.20 93 304 1.7E-74 T 11-10-2018 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 71 82 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Gene3D G3DSA:3.40.50.20 1 92 3.0E-30 T 11-10-2018 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 12 308 7.2E-102 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 11 309 34.763 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_0122 04df2fc99f197115800a41bf03fb4f95 310 Pfam PF07478 D-ala D-ala ligase C-terminus 111 306 2.8E-57 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 PIRSF PIRSF005457 1 254 7.6E-84 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 Gene3D G3DSA:3.60.15.10 1 254 3.2E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 254 39.327 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 254 2.2E-21 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 Pfam PF00753 Metallo-beta-lactamase superfamily 16 166 1.1E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 SUPERFAMILY SSF56281 3 253 1.21E-61 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 254 3.5E-91 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Tbd_1665 f11a93cdb80c742dd668aa2521a3c495 256 SMART SM00849 12 166 6.3E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Gene3D G3DSA:3.40.50.300 1 200 2.2E-78 T 11-10-2018 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Pfam PF00570 HRDC domain 530 595 2.8E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SMART SM00341 525 597 7.3E-11 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Gene3D G3DSA:1.10.150.80 528 598 2.9E-23 T 11-10-2018 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SMART SM00487 14 210 5.5E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Gene3D G3DSA:1.10.10.10 333 516 4.2E-50 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 8 597 5.1E-244 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SMART SM00490 242 323 1.7E-25 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 2.1E-154 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SUPERFAMILY SSF52540 200 446 6.2E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Pfam PF09382 RQC domain 398 509 2.3E-40 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Pfam PF00271 Helicase conserved C-terminal domain 218 322 3.9E-18 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SUPERFAMILY SSF47819 526 597 3.71E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Pfam PF16124 RecQ zinc-binding 335 396 1.6E-18 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SUPERFAMILY SSF52540 3 188 5.06E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Pfam PF00270 DEAD/DEAH box helicase 22 177 2.9E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 Gene3D G3DSA:3.40.50.300 201 332 2.4E-39 T 11-10-2018 Tbd_0896 50b6be17e0bcca8d8487841ee5ed618c 598 SMART SM00956 403 506 3.6E-55 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Tbd_0641 2bcc5338d41c852797e54381036a975b 54 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 1.2E-14 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 59 143 4.3E-35 T 11-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 Gene3D G3DSA:3.30.720.40 63 146 3.1E-15 T 11-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 Gene3D G3DSA:3.30.70.20 2 62 7.9E-23 T 11-10-2018 Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 133 1.5E-62 T 11-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 Pfam PF13187 4Fe-4S dicluster domain 9 57 2.2E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2283 22b0ecb789f749d0889385eb6ee999b0 160 SUPERFAMILY SSF54862 4 81 6.89E-22 T 11-10-2018 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PIRSF PIRSF006648 3 260 2.4E-20 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 Pfam PF01061 ABC-2 type transporter 17 222 7.7E-24 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 1.4E-37 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 1.4E-37 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 203 222 1.4E-37 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 63 85 1.4E-37 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 1.4E-37 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_0276 3724694add935306f81472dc27acd6b1 261 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 11 260 6.1E-79 T 11-10-2018 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 Tbd_1762 b85f6d9d6aa0c1ecd203f347ce7b9432 142 PIRSF PIRSF004681 3 142 1.2E-45 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tbd_1762 b85f6d9d6aa0c1ecd203f347ce7b9432 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 13 142 2.2E-39 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tbd_1762 b85f6d9d6aa0c1ecd203f347ce7b9432 142 Pfam PF01894 Uncharacterised protein family UPF0047 24 138 5.1E-35 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tbd_1762 b85f6d9d6aa0c1ecd203f347ce7b9432 142 SUPERFAMILY SSF111038 4 142 3.79E-44 T 11-10-2018 IPR035917 YjbQ-like superfamily Tbd_1762 b85f6d9d6aa0c1ecd203f347ce7b9432 142 Gene3D G3DSA:2.60.120.460 4 142 3.3E-38 T 11-10-2018 IPR035917 YjbQ-like superfamily Tbd_2637 c65ace25843e3268c9cfe641308eaf3b 268 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 265 7.2E-32 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Tbd_2637 c65ace25843e3268c9cfe641308eaf3b 268 SUPERFAMILY SSF52540 18 227 3.54E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2637 c65ace25843e3268c9cfe641308eaf3b 268 Pfam PF07728 AAA domain (dynein-related subfamily) 35 169 2.2E-31 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_2637 c65ace25843e3268c9cfe641308eaf3b 268 Gene3D G3DSA:3.40.50.300 18 187 1.4E-28 T 11-10-2018 Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 Pfam PF00753 Metallo-beta-lactamase superfamily 525 720 1.9E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 SMART SM00849 527 720 2.5E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 Gene3D G3DSA:3.60.15.10 518 762 5.7E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 Pfam PF13567 Domain of unknown function (DUF4131) 22 185 1.8E-30 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 SUPERFAMILY SSF56281 516 773 1.96E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 Pfam PF03772 Competence protein 229 490 5.0E-59 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 141 749 2.5E-110 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Tbd_1759 de18cb660da6c968d7ae515c47dfba7b 778 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 250 429 1.3E-23 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Tbd_2060 1766594922d474deb806816051874c3d 574 Gene3D G3DSA:3.20.110.20 197 491 1.2E-16 T 11-10-2018 Tbd_2060 1766594922d474deb806816051874c3d 574 Pfam PF03065 Glycosyl hydrolase family 57 9 477 2.7E-70 T 11-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Tbd_2060 1766594922d474deb806816051874c3d 574 SUPERFAMILY SSF88713 5 464 1.45E-93 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Gene3D G3DSA:2.40.30.170 251 325 7.5E-26 T 11-10-2018 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Gene3D G3DSA:2.40.50.320 421 497 2.2E-15 T 11-10-2018 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 219 397 2.2E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 SUPERFAMILY SSF111369 218 327 3.79E-10 T 11-10-2018 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Gene3D G3DSA:2.40.50.100 213 250 7.5E-26 T 11-10-2018 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Pfam PF11604 Copper binding periplasmic protein CusF 425 487 3.7E-18 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Gene3D G3DSA:2.40.420.20 331 420 8.6E-24 T 11-10-2018 Tbd_1334 84420b6ff68f12f805448b8906207eca 497 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 117 323 1.6E-62 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_1669 245a8d722c77386d4b33839ad72efa9e 468 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 261 463 9.0E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_1669 245a8d722c77386d4b33839ad72efa9e 468 SUPERFAMILY SSF161098 245 444 7.19E-18 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1669 245a8d722c77386d4b33839ad72efa9e 468 Gene3D G3DSA:1.10.3720.10 233 461 1.3E-19 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0109 83870485d480375203e14486b6db7786 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 342 1.2E-138 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0109 83870485d480375203e14486b6db7786 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 343 46.915 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0109 83870485d480375203e14486b6db7786 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 245 256 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0109 83870485d480375203e14486b6db7786 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0109 83870485d480375203e14486b6db7786 344 Pfam PF01979 Amidohydrolase family 12 310 2.0E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tbd_0109 83870485d480375203e14486b6db7786 344 PIRSF PIRSF001237 1 344 1.5E-137 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tbd_0109 83870485d480375203e14486b6db7786 344 Gene3D G3DSA:3.20.20.140 3 343 9.8E-109 T 11-10-2018 Tbd_0109 83870485d480375203e14486b6db7786 344 SUPERFAMILY SSF51556 3 342 1.74E-142 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_0190 1e518218d7e97432578e5bbf90414a0e 260 SUPERFAMILY SSF55729 91 223 5.68E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0190 1e518218d7e97432578e5bbf90414a0e 260 Gene3D G3DSA:3.40.630.30 56 226 1.2E-47 T 11-10-2018 Tbd_0885 74863667b1c88a3be7f4429715a1dc8b 262 Pfam PF11227 Protein of unknown function (DUF3025) 47 246 1.6E-65 T 11-10-2018 IPR021390 Protein of unknown function DUF3025 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 Gene3D G3DSA:1.10.287.470 237 309 7.0E-78 T 11-10-2018 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 Gene3D G3DSA:2.40.30.170 189 424 7.0E-78 T 11-10-2018 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 186 416 1.8E-46 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_1328 7e08094ca30cf706fef74c73af927377 503 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 176 481 1.7E-44 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 Gene3D G3DSA:2.40.50.100 203 345 7.0E-78 T 11-10-2018 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 Gene3D G3DSA:2.40.420.20 181 481 7.0E-78 T 11-10-2018 Tbd_1328 7e08094ca30cf706fef74c73af927377 503 SUPERFAMILY SSF111369 199 424 6.41E-25 T 11-10-2018 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 Pfam PF00691 OmpA family 162 257 2.7E-24 T 11-10-2018 IPR006665 OmpA-like domain Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 PRINTS PR01021 OMPA domain signature 193 208 1.2E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 PRINTS PR01021 OMPA domain signature 163 185 1.2E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 PRINTS PR01021 OMPA domain signature 208 224 1.2E-19 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 Gene3D G3DSA:3.30.1330.60 146 266 5.7E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 Pfam PF02412 Thrombospondin type 3 repeat 74 92 0.0011 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 Pfam PF02412 Thrombospondin type 3 repeat 100 122 0.013 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 SUPERFAMILY SSF103088 152 261 6.41E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2795 be73b5e1d6b7df82a940f285d384fa08 266 SUPERFAMILY SSF103647 66 125 2.75E-14 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Tbd_2403 6473eccdb22b11d94027da5e7c950144 156 Pfam PF06347 Bacterial SH3 domain 39 91 2.8E-10 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 Tbd_2403 6473eccdb22b11d94027da5e7c950144 156 Pfam PF06347 Bacterial SH3 domain 103 155 5.4E-8 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 Tbd_2403 6473eccdb22b11d94027da5e7c950144 156 Gene3D G3DSA:2.30.30.40 91 152 2.4E-6 T 11-10-2018 Tbd_2674 53ec97d359386be256d6438651af5283 151 Pfam PF01878 EVE domain 2 149 6.6E-50 T 11-10-2018 IPR002740 EVE domain Tbd_2674 53ec97d359386be256d6438651af5283 151 Gene3D G3DSA:3.10.590.10 1 150 3.9E-58 T 11-10-2018 Tbd_2674 53ec97d359386be256d6438651af5283 151 SUPERFAMILY SSF88697 1 150 1.49E-55 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0018 82440193af9653263cc74805c276a486 710 SUPERFAMILY SSF55874 551 703 7.6E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0018 82440193af9653263cc74805c276a486 710 SMART SM00091 364 431 0.0031 T 11-10-2018 IPR000014 PAS domain Tbd_0018 82440193af9653263cc74805c276a486 710 PIRSF PIRSF037532 1 708 6.5E-236 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Tbd_0018 82440193af9653263cc74805c276a486 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 363 483 3.9E-6 T 11-10-2018 IPR000014 PAS domain Tbd_0018 82440193af9653263cc74805c276a486 710 Gene3D G3DSA:3.30.450.20 354 478 5.8E-11 T 11-10-2018 Tbd_0018 82440193af9653263cc74805c276a486 710 Pfam PF00672 HAMP domain 302 346 3.4E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0018 82440193af9653263cc74805c276a486 710 Gene3D G3DSA:1.20.1480.50 263 353 2.7E-12 T 11-10-2018 Tbd_0018 82440193af9653263cc74805c276a486 710 SUPERFAMILY SSF158472 301 347 5.23E-9 T 11-10-2018 Tbd_0018 82440193af9653263cc74805c276a486 710 Gene3D G3DSA:3.30.565.10 557 708 1.0E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0018 82440193af9653263cc74805c276a486 710 SMART SM00388 485 557 1.7E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_0018 82440193af9653263cc74805c276a486 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 2.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0018 82440193af9653263cc74805c276a486 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0018 82440193af9653263cc74805c276a486 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0018 82440193af9653263cc74805c276a486 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 701 2.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0018 82440193af9653263cc74805c276a486 710 Pfam PF13188 PAS domain 365 411 1.2E-6 T 11-10-2018 IPR000014 PAS domain Tbd_0018 82440193af9653263cc74805c276a486 710 Gene3D G3DSA:1.10.287.130 479 554 3.0E-10 T 11-10-2018 Tbd_0018 82440193af9653263cc74805c276a486 710 SMART SM00304 298 350 3.4E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_0018 82440193af9653263cc74805c276a486 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 595 702 1.3E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0018 82440193af9653263cc74805c276a486 710 SMART SM00387 595 704 1.5E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0018 82440193af9653263cc74805c276a486 710 SUPERFAMILY SSF55785 356 475 1.9E-9 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_0018 82440193af9653263cc74805c276a486 710 SUPERFAMILY SSF47384 481 555 4.9E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2262 e466e226309461b3f0ffae2eb5cef766 120 Gene3D G3DSA:2.30.30.240 2 90 1.3E-24 T 11-10-2018 Tbd_2262 e466e226309461b3f0ffae2eb5cef766 120 SUPERFAMILY SSF50346 11 119 3.34E-27 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Tbd_2262 e466e226309461b3f0ffae2eb5cef766 120 Pfam PF05239 PRC-barrel domain 10 85 2.3E-18 T 11-10-2018 IPR027275 PRC-barrel domain Tbd_2713 9e9012150bb2b2cd7701724809382cb4 172 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 167 3.8E-57 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tbd_2713 9e9012150bb2b2cd7701724809382cb4 172 PIRSF PIRSF006135 1 170 3.2E-51 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tbd_2713 9e9012150bb2b2cd7701724809382cb4 172 SUPERFAMILY SSF52540 2 168 2.28E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2713 9e9012150bb2b2cd7701724809382cb4 172 Gene3D G3DSA:3.40.50.300 2 168 9.8E-54 T 11-10-2018 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 Pfam PF06426 Serine acetyltransferase, N-terminal 4 37 2.6E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 SUPERFAMILY SSF51161 4 173 1.94E-55 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 168 8.1E-78 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 Gene3D G3DSA:1.10.3130.10 1 68 8.0E-26 T 11-10-2018 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 Gene3D G3DSA:2.160.10.10 69 191 2.2E-37 T 11-10-2018 Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 1.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_1162 eb38999104f3b88b4ef2a8f7d493f717 252 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 110 4.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_1428 8bb11c349b62277cbb97f0a879f30cf1 268 Gene3D G3DSA:3.40.50.150 61 247 5.0E-57 T 11-10-2018 Tbd_1428 8bb11c349b62277cbb97f0a879f30cf1 268 SUPERFAMILY SSF53335 60 234 4.99E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1428 8bb11c349b62277cbb97f0a879f30cf1 268 Pfam PF13847 Methyltransferase domain 81 227 2.9E-36 T 11-10-2018 IPR025714 Methyltransferase domain Tbd_2084 99a101fbdc67dca01baf32db47822307 256 Pfam PF02565 Recombination protein O C terminal 95 243 1.5E-18 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tbd_2084 99a101fbdc67dca01baf32db47822307 256 SUPERFAMILY SSF57863 99 169 6.28E-5 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Tbd_2084 99a101fbdc67dca01baf32db47822307 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 19 197 7.6E-23 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tbd_2084 99a101fbdc67dca01baf32db47822307 256 Gene3D G3DSA:2.40.50.140 16 89 8.8E-29 T 11-10-2018 Tbd_2084 99a101fbdc67dca01baf32db47822307 256 Hamap MF_00201 DNA repair protein RecO [recO]. 14 251 23.217 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tbd_2084 99a101fbdc67dca01baf32db47822307 256 SUPERFAMILY SSF50249 17 88 1.64E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2084 99a101fbdc67dca01baf32db47822307 256 Gene3D G3DSA:1.20.1440.120 93 255 9.5E-47 T 11-10-2018 Tbd_2084 99a101fbdc67dca01baf32db47822307 256 Pfam PF11967 Recombination protein O N terminal 17 88 7.3E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Tbd_2149 d9f69c6ddfcd69c48b4c3f48b01bc843 203 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 37 188 6.7E-25 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Tbd_2149 d9f69c6ddfcd69c48b4c3f48b01bc843 203 SUPERFAMILY SSF52266 34 197 5.92E-38 T 11-10-2018 Tbd_2149 d9f69c6ddfcd69c48b4c3f48b01bc843 203 Gene3D G3DSA:3.40.50.1110 32 201 1.1E-45 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Tbd_2430 3878a733093f26b0c8513da03319f37b 595 SUPERFAMILY SSF52540 59 282 8.88E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2430 3878a733093f26b0c8513da03319f37b 595 Gene3D G3DSA:3.40.50.300 42 325 4.7E-80 T 11-10-2018 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 Gene3D G3DSA:3.40.50.300 326 593 5.7E-77 T 11-10-2018 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 Pfam PF00005 ABC transporter 63 231 5.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 Pfam PF12848 ABC transporter 270 346 5.7E-12 T 11-10-2018 IPR032781 ABC-transporter extension domain Tbd_2430 3878a733093f26b0c8513da03319f37b 595 ProSitePatterns PS00211 ABC transporters family signature. 203 217 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 Pfam PF00005 ABC transporter 380 513 9.9E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 SMART SM00382 388 566 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2430 3878a733093f26b0c8513da03319f37b 595 SMART SM00382 72 276 6.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2430 3878a733093f26b0c8513da03319f37b 595 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 43 593 8.8E-293 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Tbd_2430 3878a733093f26b0c8513da03319f37b 595 SUPERFAMILY SSF52540 342 564 2.06E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.7E-144 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 Gene3D G3DSA:3.40.50.300 159 335 8.7E-53 T 11-10-2018 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 SUPERFAMILY SSF82051 2 158 7.59E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 Gene3D G3DSA:2.70.210.12 1 158 6.9E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 Hamap MF_01454 GTPase Obg [obg]. 2 334 48.042 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.9E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.9E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.9E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.9E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 SUPERFAMILY SSF52540 152 335 5.84E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.5E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 PIRSF PIRSF002401 1 345 6.2E-135 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type Tbd_0866 971ffec835301049b0992c9fdcc2a452 350 Pfam PF01018 GTP1/OBG 4 158 1.2E-59 T 11-10-2018 IPR006169 GTP1/OBG domain Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 49.299 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 SUPERFAMILY SSF51726 2 350 3.84E-119 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 2.9E-135 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 Gene3D G3DSA:3.20.20.210 1 356 4.7E-156 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2779 5fe6da3dd1a0b1c0c3c153392b2d2d6c 356 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 8.9E-127 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 Gene3D G3DSA:3.40.50.150 112 412 4.1E-79 T 11-10-2018 Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 SUPERFAMILY SSF53335 107 412 8.28E-66 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 234 2.9E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 305 2.9E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 195 209 2.9E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 395 412 2.9E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 343 359 2.9E-28 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 Gene3D G3DSA:1.10.940.10 7 73 2.5E-5 T 11-10-2018 IPR035926 NusB-like superfamily Tbd_2598 ce6a2f33bf71d46b8025fce430327728 415 Pfam PF01189 16S rRNA methyltransferase RsmB/F 213 410 2.6E-43 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 SMART SM00559 56 184 1.4E-32 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 5 266 30.622 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 PIRSF PIRSF006493 3 299 3.0E-88 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 SUPERFAMILY SSF100939 5 271 3.73E-48 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 Gene3D G3DSA:2.40.290.10 6 183 4.4E-19 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 Pfam PF02735 Ku70/Ku80 beta-barrel domain 15 183 1.4E-35 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Tbd_2246 50124f6523220d30ef605a1e6a021cf4 299 TIGRFAM TIGR02772 Ku_bact: Ku protein 6 268 2.2E-89 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tbd_0393 c988ae315f177df89e7c734d333b734d 187 Gene3D G3DSA:3.30.70.940 1 127 6.2E-44 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 Gene3D G3DSA:2.30.30.30 128 186 7.3E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 SMART SM00739 133 160 4.5E-6 T 11-10-2018 IPR005824 KOW Tbd_0393 c988ae315f177df89e7c734d333b734d 187 SUPERFAMILY SSF50104 131 186 6.02E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tbd_0393 c988ae315f177df89e7c734d333b734d 187 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 3 186 3.4E-65 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 187 23.021 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 Pfam PF00467 KOW motif 136 168 9.4E-7 T 11-10-2018 IPR005824 KOW Tbd_0393 c988ae315f177df89e7c734d333b734d 187 SUPERFAMILY SSF82679 1 123 2.09E-35 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 PRINTS PR00338 Transcription termination factor NUSG signature 163 179 7.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 PRINTS PR00338 Transcription termination factor NUSG signature 67 79 7.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 PRINTS PR00338 Transcription termination factor NUSG signature 145 160 7.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 Pfam PF02357 Transcription termination factor nusG 1 118 1.5E-28 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tbd_0393 c988ae315f177df89e7c734d333b734d 187 ProSitePatterns PS01014 Transcription termination factor nusG signature. 170 179 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Tbd_0393 c988ae315f177df89e7c734d333b734d 187 SMART SM00738 1 121 8.7E-44 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tbd_0157 33dd5e743efcaebcbd5daf606ad84ad4 204 Gene3D G3DSA:3.40.50.150 3 154 4.7E-26 T 11-10-2018 Tbd_0157 33dd5e743efcaebcbd5daf606ad84ad4 204 SUPERFAMILY SSF53335 8 166 6.82E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0157 33dd5e743efcaebcbd5daf606ad84ad4 204 Pfam PF08241 Methyltransferase domain 46 144 5.4E-14 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_0123 c7a744910366b96b81ba54faf1b40364 258 Gene3D G3DSA:3.10.20.310 40 109 8.6E-20 T 11-10-2018 Tbd_0123 c7a744910366b96b81ba54faf1b40364 258 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 10 245 23.452 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Tbd_0123 c7a744910366b96b81ba54faf1b40364 258 Pfam PF03799 Cell division protein FtsQ 113 222 1.4E-23 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB Tbd_0123 c7a744910366b96b81ba54faf1b40364 258 Gene3D G3DSA:3.40.50.11690 110 249 2.1E-37 T 11-10-2018 Tbd_0123 c7a744910366b96b81ba54faf1b40364 258 Pfam PF08478 POTRA domain, FtsQ-type 40 109 5.4E-18 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Gene3D G3DSA:1.10.760.10 96 302 1.4E-64 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 SUPERFAMILY SSF46626 207 305 1.22E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Gene3D G3DSA:1.20.58.1490 1 68 4.2E-20 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Gene3D G3DSA:1.10.760.10 179 279 1.4E-64 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 SUPERFAMILY SSF46626 30 208 1.89E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 PIRSF PIRSF000006 1 306 1.1E-82 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 210 299 1.9E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 125 198 2.6E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 7 306 1.4E-76 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 PRINTS PR00605 Class IC cytochrome C signature 277 299 5.0E-8 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 PRINTS PR00605 Class IC cytochrome C signature 133 144 5.0E-8 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Tbd_0341 30676190a7af411f6c8daedef52fde6e 306 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 11 57 4.8E-24 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 SUPERFAMILY SSF55174 1 67 1.9E-5 T 11-10-2018 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 Gene3D G3DSA:3.30.70.1560 129 210 6.7E-49 T 11-10-2018 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 SUPERFAMILY SSF55120 61 226 8.64E-43 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 Gene3D G3DSA:3.10.290.10 1 58 2.3E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 Pfam PF00849 RNA pseudouridylate synthase 62 193 4.5E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 2.6E-40 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_0779 9b628de8f8cdab25bb35a09ed861e145 240 Gene3D G3DSA:3.30.70.580 62 225 6.7E-49 T 11-10-2018 Tbd_0711 74ba90ab6d3ad22e298fa198049c62ad 140 Gene3D G3DSA:3.30.420.270 63 132 2.5E-11 T 11-10-2018 Tbd_0711 74ba90ab6d3ad22e298fa198049c62ad 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 136 6.6E-32 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tbd_2129 63bcceb19bc5afb2b9e0c8eca8a7752b 744 Pfam PF07793 Protein of unknown function (DUF1631) 26 732 6.1E-174 T 11-10-2018 IPR012434 Protein of unknown function DUF1631 Tbd_2307 852a575d6e2d8d9648866e30addbe845 139 Pfam PF00583 Acetyltransferase (GNAT) family 19 112 8.3E-12 T 11-10-2018 IPR000182 GNAT domain Tbd_2307 852a575d6e2d8d9648866e30addbe845 139 Gene3D G3DSA:3.40.630.30 1 139 1.2E-44 T 11-10-2018 Tbd_2307 852a575d6e2d8d9648866e30addbe845 139 SUPERFAMILY SSF55729 10 138 5.23E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0901 f4cbba5cf94c107d443cf3ad0d2833d8 437 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 123 333 6.2E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_0901 f4cbba5cf94c107d443cf3ad0d2833d8 437 SUPERFAMILY SSF111369 135 343 1.2E-7 T 11-10-2018 Tbd_0901 f4cbba5cf94c107d443cf3ad0d2833d8 437 Gene3D G3DSA:2.40.420.20 354 437 1.1E-8 T 11-10-2018 Tbd_0901 f4cbba5cf94c107d443cf3ad0d2833d8 437 Gene3D G3DSA:2.40.30.170 264 353 1.2E-5 T 11-10-2018 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 7 442 1.2E-175 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 Pfam PF00696 Amino acid kinase family 24 268 1.9E-23 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 Pfam PF00583 Acetyltransferase (GNAT) family 329 413 1.8E-11 T 11-10-2018 IPR000182 GNAT domain Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 SUPERFAMILY SSF53633 3 293 1.4E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 PIRSF PIRSF000423 1 442 6.1E-188 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 Gene3D G3DSA:3.40.630.30 294 442 3.8E-40 T 11-10-2018 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 SUPERFAMILY SSF55729 280 415 1.69E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 207.313 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Tbd_0154 8e514b1d3df9451f330b13efe4191f61 442 Gene3D G3DSA:3.40.1160.10 5 292 3.0E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 SUPERFAMILY SSF54975 2 85 9.16E-26 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 Pfam PF00708 Acylphosphatase 5 85 2.4E-25 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 PRINTS PR00112 Acylphosphatase signature 3 18 7.4E-9 T 11-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 PRINTS PR00112 Acylphosphatase signature 24 49 7.4E-9 T 11-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_0859 843b2f9853423ef7ed08eb07fabcb50d 89 Gene3D G3DSA:3.30.70.100 1 86 6.5E-31 T 11-10-2018 Tbd_2231 fbb50735fb64668011f7dfe78c163e52 127 SUPERFAMILY SSF110069 8 127 1.96E-50 T 11-10-2018 IPR036767 ApaG domain superfamily Tbd_2231 fbb50735fb64668011f7dfe78c163e52 127 Gene3D G3DSA:2.60.40.1470 2 127 3.0E-51 T 11-10-2018 IPR036767 ApaG domain superfamily Tbd_2231 fbb50735fb64668011f7dfe78c163e52 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 34.505 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG Tbd_2231 fbb50735fb64668011f7dfe78c163e52 127 Pfam PF04379 ApaG domain 20 104 4.7E-37 T 11-10-2018 IPR007474 ApaG domain Tbd_1984 b9c956d198a1033e24636898e4127431 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 9.6E-19 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1984 b9c956d198a1033e24636898e4127431 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tbd_1984 b9c956d198a1033e24636898e4127431 196 SUPERFAMILY SSF46689 3 87 9.98E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_1984 b9c956d198a1033e24636898e4127431 196 SUPERFAMILY SSF48498 84 195 1.46E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_1984 b9c956d198a1033e24636898e4127431 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1984 b9c956d198a1033e24636898e4127431 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1984 b9c956d198a1033e24636898e4127431 196 Gene3D G3DSA:1.10.357.10 12 196 6.7E-39 T 11-10-2018 Tbd_0687 936b420de7490b2f5f2c2f0b0b908d92 129 SUPERFAMILY SSF54427 27 127 3.97E-32 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_0687 936b420de7490b2f5f2c2f0b0b908d92 129 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 4 126 25.897 T 11-10-2018 IPR023006 Uncharacterised protein family UPF0225 Tbd_0687 936b420de7490b2f5f2c2f0b0b908d92 129 Gene3D G3DSA:3.10.450.50 7 129 6.2E-35 T 11-10-2018 Tbd_0687 936b420de7490b2f5f2c2f0b0b908d92 129 Pfam PF02810 SEC-C motif 8 22 2.3E-4 T 11-10-2018 IPR004027 SEC-C motif Tbd_2013 0e618e5cd54e8f13f3f3afb1f2781052 380 Gene3D G3DSA:3.30.450.20 62 199 6.6E-8 T 11-10-2018 Tbd_2013 0e618e5cd54e8f13f3f3afb1f2781052 380 SUPERFAMILY SSF103190 102 205 4.0E-10 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 130 32.535 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 Gene3D G3DSA:3.30.420.80 2 130 4.7E-56 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 SUPERFAMILY SSF53137 15 130 1.44E-47 T 11-10-2018 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 2.1E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 PIRSF PIRSF002131 1 130 9.2E-53 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 Pfam PF00411 Ribosomal protein S11 20 129 3.4E-50 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tbd_0428 72239c19829d64fbc2c781e1e92e3390 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 3.8E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 Gene3D G3DSA:3.30.700.10 18 110 1.5E-12 T 11-10-2018 Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 SUPERFAMILY SSF54523 18 123 1.1E-16 T 11-10-2018 Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 38 7.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 2.4E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 2.4E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1301 0db2a11cc219cd7dc876d53c7648aced 168 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1000 cf009c91ce3be05f7e397c7f2e642989 219 SMART SM00463 131 215 1.5E-15 T 11-10-2018 IPR002625 Smr domain Tbd_1000 cf009c91ce3be05f7e397c7f2e642989 219 SUPERFAMILY SSF160443 132 215 2.75E-20 T 11-10-2018 IPR036063 Smr domain superfamily Tbd_1000 cf009c91ce3be05f7e397c7f2e642989 219 Gene3D G3DSA:3.30.1370.110 93 219 1.4E-42 T 11-10-2018 Tbd_1000 cf009c91ce3be05f7e397c7f2e642989 219 Pfam PF01713 Smr domain 134 215 6.9E-25 T 11-10-2018 IPR002625 Smr domain Tbd_0887 17327a0793005576e83ae7184923424d 320 Pfam PF00561 alpha/beta hydrolase fold 39 299 1.7E-31 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0887 17327a0793005576e83ae7184923424d 320 SUPERFAMILY SSF53474 7 300 8.71E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 109 123 2.3E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 66 77 2.3E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 40 48 2.3E-14 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Tbd_0887 17327a0793005576e83ae7184923424d 320 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 12 313 6.7E-117 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Tbd_0887 17327a0793005576e83ae7184923424d 320 Gene3D G3DSA:3.40.50.1820 4 316 7.4E-100 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0887 17327a0793005576e83ae7184923424d 320 PIRSF PIRSF006431 3 317 9.7E-130 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0887 17327a0793005576e83ae7184923424d 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0211 5cc1ed2af513ffa203c54ab00ece3e67 248 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 222 245 9.4E-7 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0211 5cc1ed2af513ffa203c54ab00ece3e67 248 Pfam PF07589 PEP-CTERM motif 222 244 1.2E-7 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Gene3D G3DSA:3.30.200.210 3 121 7.4E-16 T 11-10-2018 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Gene3D G3DSA:2.40.40.20 757 922 1.5E-26 T 11-10-2018 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Pfam PF00384 Molybdopterin oxidoreductase 71 594 4.6E-28 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Gene3D G3DSA:3.40.50.740 476 642 1.7E-12 T 11-10-2018 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Pfam PF01568 Molydopterin dinucleotide binding domain 783 881 3.3E-11 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Gene3D G3DSA:3.40.228.10 144 437 7.8E-51 T 11-10-2018 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 SUPERFAMILY SSF53706 14 764 9.16E-137 T 11-10-2018 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 SMART SM00926 13 67 1.1E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 66 3.3E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0570 aca1a36ccf2e22085ade7cd0f6c915e7 958 SUPERFAMILY SSF50692 775 928 5.2E-31 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Pfam PF01926 50S ribosome-binding GTPase 200 326 1.9E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 SUPERFAMILY SSF52540 198 371 3.16E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.0E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 275 293 2.0E-8 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 3.6E-27 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 PIRSF PIRSF006809 4 388 3.8E-133 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Gene3D G3DSA:3.40.50.300 199 373 2.5E-37 T 11-10-2018 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Hamap MF_00900 GTPase HflX [hflX]. 27 378 45.601 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Gene3D G3DSA:3.40.50.11060 20 138 6.6E-37 T 11-10-2018 Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.9E-30 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Tbd_0602 8bfe4d523b5050081f0f37b5fc9037c5 389 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 368 1.8E-144 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 Gene3D G3DSA:3.30.420.40 18 357 1.3E-86 T 11-10-2018 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 SMART SM00842 17 185 4.1E-5 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 PRINTS PR00301 70kDa heat shock protein signature 324 344 5.6E-5 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 PRINTS PR00301 70kDa heat shock protein signature 16 29 5.6E-5 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 PRINTS PR00301 70kDa heat shock protein signature 294 310 5.6E-5 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 18 359 9.0E-100 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 Gene3D G3DSA:3.30.1490.300 94 153 1.3E-86 T 11-10-2018 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 SUPERFAMILY SSF53067 64 180 2.12E-11 T 11-10-2018 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 Pfam PF11104 Type IV pilus assembly protein PilM; 19 359 2.5E-147 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 SUPERFAMILY SSF53067 197 356 6.48E-26 T 11-10-2018 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 Gene3D G3DSA:3.30.420.40 196 323 1.3E-86 T 11-10-2018 Tbd_0202 0265ee06f058990fbac57831ce0655d1 362 PIRSF PIRSF019169 4 360 1.8E-130 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Tbd_2366 7327d0f39702449db32e8ee8697a3537 251 Gene3D G3DSA:2.60.440.10 4 249 5.4E-87 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal Tbd_2366 7327d0f39702449db32e8ee8697a3537 251 Pfam PF07072 Cell division protein 16 225 2.2E-80 T 11-10-2018 IPR009777 Cell division protein ZapD Tbd_2366 7327d0f39702449db32e8ee8697a3537 251 Gene3D G3DSA:1.10.3900.10 10 177 5.4E-87 T 11-10-2018 Tbd_2366 7327d0f39702449db32e8ee8697a3537 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 31.663 T 11-10-2018 IPR009777 Cell division protein ZapD Tbd_2366 7327d0f39702449db32e8ee8697a3537 251 SUPERFAMILY SSF160950 2 249 3.4E-85 T 11-10-2018 IPR036268 ZapD domain superfamily Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 15 383 1.1E-109 T 11-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 SUPERFAMILY SSF56436 174 383 2.2E-43 T 11-10-2018 IPR016187 C-type lectin fold Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 Pfam PF12867 DinB superfamily 19 131 5.0E-6 T 11-10-2018 IPR024775 DinB-like domain Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 Gene3D G3DSA:3.90.1580.10 312 386 1.0E-6 T 11-10-2018 Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 Gene3D G3DSA:3.90.1580.10 169 308 7.5E-19 T 11-10-2018 Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 TIGRFAM TIGR04373 egtB_X_signatur: EgtB-related enzyme signature domain 335 383 2.5E-26 T 11-10-2018 IPR030809 EgtB-related enzyme signature domain Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 Pfam PF03781 Sulfatase-modifying factor enzyme 1 176 305 6.5E-14 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 Pfam PF03781 Sulfatase-modifying factor enzyme 1 313 383 1.5E-6 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Tbd_1022 9cdfc8c75b139e21ef785015b5cec58b 386 SUPERFAMILY SSF109854 12 141 4.49E-6 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Tbd_1747 8d826e535f064709662338c1985150b8 563 Gene3D G3DSA:2.40.30.170 268 491 1.7E-31 T 11-10-2018 Tbd_1747 8d826e535f064709662338c1985150b8 563 Gene3D G3DSA:2.40.420.20 262 552 1.7E-31 T 11-10-2018 Tbd_1747 8d826e535f064709662338c1985150b8 563 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 265 434 2.7E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_1747 8d826e535f064709662338c1985150b8 563 Gene3D G3DSA:1.10.287.470 319 386 1.7E-31 T 11-10-2018 Tbd_1747 8d826e535f064709662338c1985150b8 563 Gene3D G3DSA:2.40.50.100 282 417 1.7E-31 T 11-10-2018 Tbd_1747 8d826e535f064709662338c1985150b8 563 SUPERFAMILY SSF111369 304 421 4.45E-8 T 11-10-2018 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 SUPERFAMILY SSF46955 1 126 1.06E-38 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 8.2E-51 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 Pfam PF09278 MerR, DNA binding 45 108 6.0E-23 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 Pfam PF00376 MerR family regulatory protein 2 39 4.0E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 SMART SM00422 1 70 2.8E-32 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2267 6ba8c2818648d661a8bfc233a691a590 132 Gene3D G3DSA:1.10.1660.10 1 125 7.5E-37 T 11-10-2018 Tbd_1339 354ed82ad8a8305e7d3f85bcdf28f0ff 117 Pfam PF02411 MerT mercuric transport protein 1 117 4.5E-43 T 11-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 183 4.8E-82 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 Pfam PF14697 4Fe-4S dicluster domain 106 160 2.6E-18 T 11-10-2018 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 SUPERFAMILY SSF54862 37 172 9.21E-31 T 11-10-2018 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 Gene3D G3DSA:1.10.15.40 35 82 6.3E-11 T 11-10-2018 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 165 24.494 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 PIRSF PIRSF005784 1 187 3.0E-87 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 Gene3D G3DSA:3.30.70.20 83 178 1.3E-21 T 11-10-2018 Tbd_2016 5ba89b3b8701a030867a187a354f72c7 188 Pfam PF04060 Putative Fe-S cluster 41 73 4.0E-17 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 SUPERFAMILY SSF51366 1 250 1.32E-89 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 258 3.0E-72 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 33.003 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 Pfam PF00290 Tryptophan synthase alpha chain 8 247 4.9E-84 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 Gene3D G3DSA:3.20.20.70 1 269 3.1E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1913 4bf761b1e6fd4a2c30e109f6730d3af5 273 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 SMART SM00850 153 252 8.9E-29 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 SMART SM00448 8 122 1.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 Pfam PF04397 LytTr DNA-binding domain 154 251 1.5E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 Pfam PF00072 Response regulator receiver domain 10 122 9.9E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 SUPERFAMILY SSF52172 6 150 2.56E-34 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 Gene3D G3DSA:2.40.50.40 143 211 9.1E-12 T 11-10-2018 Tbd_0231 0203ccd49feceeb03059c42fe0545a42 254 Gene3D G3DSA:3.40.50.2300 4 141 7.2E-32 T 11-10-2018 Tbd_2238 865bf6853c3f6d7993f2229c31caa1e6 55 PIRSF PIRSF036466 2 55 5.1E-19 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2238 865bf6853c3f6d7993f2229c31caa1e6 55 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 1.1E-13 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2238 865bf6853c3f6d7993f2229c31caa1e6 55 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 2 49 19.103 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_1454 26b57a2896ef860fc8c0f2ea6c5bfeac 410 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 54 295 2.0E-20 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Tbd_1454 26b57a2896ef860fc8c0f2ea6c5bfeac 410 Gene3D G3DSA:3.30.590.20 10 403 1.4E-63 T 11-10-2018 Tbd_1454 26b57a2896ef860fc8c0f2ea6c5bfeac 410 SUPERFAMILY SSF55931 12 391 5.2E-39 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tbd_0606 637cde94a909992439ef5dd826b10249 321 PIRSF PIRSF001549 4 321 2.4E-43 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tbd_0606 637cde94a909992439ef5dd826b10249 321 Pfam PF13393 Histidyl-tRNA synthetase 10 313 3.2E-117 T 11-10-2018 Tbd_0606 637cde94a909992439ef5dd826b10249 321 Gene3D G3DSA:3.30.930.10 3 321 1.1E-66 T 11-10-2018 Tbd_0606 637cde94a909992439ef5dd826b10249 321 SUPERFAMILY SSF55681 4 315 1.12E-57 T 11-10-2018 Tbd_0606 637cde94a909992439ef5dd826b10249 321 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 321 29.134 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Tbd_0606 637cde94a909992439ef5dd826b10249 321 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 316 1.7E-85 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 Gene3D G3DSA:3.30.428.10 14 359 3.7E-95 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 8 185 5.2E-13 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 PIRSF PIRSF000808 4 363 1.3E-111 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 SUPERFAMILY SSF54197 9 186 1.05E-42 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 SUPERFAMILY SSF54197 188 361 3.4E-28 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_0601 ad20e8e45681999080a77c61b145d5ad 366 Gene3D G3DSA:3.30.428.10 54 184 3.7E-95 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_2561 295d426c1065a5005379f6576fce971e 135 Pfam PF04186 FxsA cytoplasmic membrane protein 8 104 5.8E-19 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 SUPERFAMILY SSF52172 3 132 1.99E-40 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 8.1E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 SMART SM00862 153 229 1.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 SUPERFAMILY SSF46894 131 230 2.3E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 Gene3D G3DSA:3.40.50.2300 1 131 1.6E-37 T 11-10-2018 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 SMART SM00448 4 115 5.5E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 Gene3D G3DSA:1.10.10.10 132 234 8.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2354 8cb6f458822fff27097c2ff17902bcf7 235 Pfam PF00072 Response regulator receiver domain 6 116 5.5E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2556 ee6ad7e92c9a5009158b2d77e46b71e9 211 Gene3D G3DSA:3.20.20.70 5 207 2.5E-60 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2556 ee6ad7e92c9a5009158b2d77e46b71e9 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 206 27.482 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_2556 ee6ad7e92c9a5009158b2d77e46b71e9 211 SUPERFAMILY SSF51391 7 204 1.96E-61 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_2556 ee6ad7e92c9a5009158b2d77e46b71e9 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 201 1.5E-59 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_2556 ee6ad7e92c9a5009158b2d77e46b71e9 211 Pfam PF02581 Thiamine monophosphate synthase 8 188 5.9E-57 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_2350 2f7edf256fc2e2c998120de38f8d2de3 280 SUPERFAMILY SSF81342 15 54 1.94E-7 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tbd_2350 2f7edf256fc2e2c998120de38f8d2de3 280 Gene3D G3DSA:1.20.950.20 104 261 1.4E-17 T 11-10-2018 Tbd_2350 2f7edf256fc2e2c998120de38f8d2de3 280 Gene3D G3DSA:1.20.950.20 7 63 1.1E-5 T 11-10-2018 Tbd_2350 2f7edf256fc2e2c998120de38f8d2de3 280 SUPERFAMILY SSF81342 110 275 3.3E-25 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tbd_2350 2f7edf256fc2e2c998120de38f8d2de3 280 Pfam PF01292 Prokaryotic cytochrome b561 17 270 1.1E-34 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 SMART SM00283 274 521 3.2E-91 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 489 3.3E-51 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 114 1.4E-12 T 11-10-2018 IPR000014 PAS domain Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 Gene3D G3DSA:3.30.450.20 4 135 2.8E-22 T 11-10-2018 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 Gene3D G3DSA:1.10.287.950 221 523 1.0E-85 T 11-10-2018 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 102 117 3.9E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 3.9E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 3.9E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 Pfam PF08447 PAS fold 31 114 4.3E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 SUPERFAMILY SSF55785 20 114 3.14E-24 T 11-10-2018 IPR035965 PAS domain superfamily Tbd_1618 d24a1fa998c77c80fe1d1df92b4f18f2 557 SUPERFAMILY SSF58104 241 524 1.7E-72 T 11-10-2018 Tbd_2672 2658326f3118a452da6e8fa088a99a0a 300 Pfam PF00378 Enoyl-CoA hydratase/isomerase 70 211 1.7E-17 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Tbd_2672 2658326f3118a452da6e8fa088a99a0a 300 Gene3D G3DSA:3.90.226.10 4 232 2.4E-70 T 11-10-2018 Tbd_2672 2658326f3118a452da6e8fa088a99a0a 300 SUPERFAMILY SSF52096 22 251 2.11E-35 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 Pfam PF04452 RNA methyltransferase 25 236 2.7E-67 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 Gene3D G3DSA:3.40.1280.10 74 242 4.3E-57 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 SUPERFAMILY SSF88697 4 71 2.82E-14 T 11-10-2018 IPR015947 PUA-like superfamily Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 18 241 1.2E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 PIRSF PIRSF015601 2 241 2.2E-55 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 SUPERFAMILY SSF75217 74 241 1.0E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_0155 f03b39c9b3d642f11d3c2991d628bfff 242 Gene3D G3DSA:2.40.240.20 1 68 1.6E-19 T 11-10-2018 Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 SUPERFAMILY SSF50891 42 207 3.65E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 Gene3D G3DSA:2.40.100.10 46 208 2.5E-64 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 47 205 2.3E-47 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 75 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 98 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Tbd_2047 b303c5be5f45fd8b0e193f38552abd13 219 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 81 98 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Tbd_0861 f77d41131a14b0b528356712a02d1b68 193 Gene3D G3DSA:1.25.40.10 83 193 3.5E-35 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0861 f77d41131a14b0b528356712a02d1b68 193 SUPERFAMILY SSF48452 1 189 4.55E-61 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0861 f77d41131a14b0b528356712a02d1b68 193 Pfam PF06041 Bacterial protein of unknown function (DUF924) 1 190 5.6E-63 T 11-10-2018 IPR010323 Protein of unknown function DUF924 Tbd_0861 f77d41131a14b0b528356712a02d1b68 193 Gene3D G3DSA:1.20.58.320 1 82 1.9E-20 T 11-10-2018 Tbd_1726 42641ebb205c2291905a475369fc579e 362 Gene3D G3DSA:2.120.10.30 98 357 8.7E-24 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_1726 42641ebb205c2291905a475369fc579e 362 SUPERFAMILY SSF50952 20 360 6.02E-36 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Tbd_1726 42641ebb205c2291905a475369fc579e 362 Pfam PF07995 Glucose / Sorbosone dehydrogenase 138 354 3.0E-13 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 Gene3D G3DSA:2.20.28.120 1 55 3.8E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 SUPERFAMILY SSF57829 1 53 2.26E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.9 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 Pfam PF00471 Ribosomal protein L33 7 53 6.1E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2590 206ea5fe9f961d2bad24c0b7a11fe5d3 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.6E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 Gene3D G3DSA:2.40.50.140 1 72 5.2E-34 T 11-10-2018 Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.431 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.5E-33 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 SMART SM00316 4 72 1.7E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 SUPERFAMILY SSF50249 1 71 1.49E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_1463 1403b18ff40fb4baeaf2d649119a5d46 87 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-24 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Tbd_0863 c13e783f7ddff85e3fd6ed66d72d38a9 343 SUPERFAMILY SSF48576 24 342 2.88E-101 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_0863 c13e783f7ddff85e3fd6ed66d72d38a9 343 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 224 236 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tbd_0863 c13e783f7ddff85e3fd6ed66d72d38a9 343 Pfam PF00348 Polyprenyl synthetase 53 281 5.3E-75 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tbd_0863 c13e783f7ddff85e3fd6ed66d72d38a9 343 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 102 116 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tbd_0863 c13e783f7ddff85e3fd6ed66d72d38a9 343 Gene3D G3DSA:1.10.600.10 13 342 4.6E-114 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_2649 81434f7ab48137313b89f23b0f990768 525 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 62 505 2.1E-201 T 11-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Tbd_2649 81434f7ab48137313b89f23b0f990768 525 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 62 515 3.2E-215 T 11-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Tbd_2649 81434f7ab48137313b89f23b0f990768 525 Gene3D G3DSA:3.30.1330.140 402 518 4.7E-49 T 11-10-2018 Tbd_2649 81434f7ab48137313b89f23b0f990768 525 Gene3D G3DSA:1.20.120.1310 50 155 4.4E-33 T 11-10-2018 Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 SUPERFAMILY SSF52768 1 305 1.34E-102 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 Gene3D G3DSA:3.40.800.20 1 307 1.9E-118 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 1.4E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 1.4E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.4E-15 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tbd_2025 d94b08d12ef0f0ac2863ab04a51b5197 307 Pfam PF00850 Histone deacetylase domain 20 304 2.7E-82 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tbd_0845 a6b9e589ecb852bf57809ce4c33aa341 228 SMART SM00986 55 212 2.1E-28 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0845 a6b9e589ecb852bf57809ce4c33aa341 228 SMART SM00987 55 212 2.1E-28 T 11-10-2018 Tbd_0845 a6b9e589ecb852bf57809ce4c33aa341 228 Gene3D G3DSA:3.40.470.10 27 221 4.6E-67 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0845 a6b9e589ecb852bf57809ce4c33aa341 228 SUPERFAMILY SSF52141 31 218 7.52E-55 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0845 a6b9e589ecb852bf57809ce4c33aa341 228 Pfam PF03167 Uracil DNA glycosylase superfamily 59 211 6.5E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_0322 53f4592ea4e8abe5e5ef325619c64b47 306 Pfam PF08241 Methyltransferase domain 51 162 4.4E-19 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_0322 53f4592ea4e8abe5e5ef325619c64b47 306 SUPERFAMILY SSF53335 11 267 7.28E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0322 53f4592ea4e8abe5e5ef325619c64b47 306 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 6 279 32.315 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Tbd_0322 53f4592ea4e8abe5e5ef325619c64b47 306 Gene3D G3DSA:3.40.50.150 2 197 1.4E-33 T 11-10-2018 Tbd_0322 53f4592ea4e8abe5e5ef325619c64b47 306 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 14 278 2.5E-71 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 Pfam PF01022 Bacterial regulatory protein, arsR family 31 76 2.0E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 SUPERFAMILY SSF46785 14 105 1.25E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 Gene3D G3DSA:1.10.10.10 8 104 3.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 41 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 56 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 1.4E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2395 1554ca3b0992979bb12f8bb769a8537f 109 SMART SM00418 24 102 1.1E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 Pfam PF00210 Ferritin-like domain 8 134 2.1E-20 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PIRSF PIRSF002560 1 142 1.4E-26 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 Gene3D G3DSA:1.20.1260.10 1 142 9.2E-36 T 11-10-2018 IPR012347 Ferritin-like Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 84 104 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 21 41 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 63 83 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 1 20 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 42 62 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 PRINTS PR00601 Bacterioferritin signature 105 125 6.1E-19 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2643 d7632a58287aedfc4ed63dbe9dd03018 147 SUPERFAMILY SSF47240 2 135 3.68E-30 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_2170 35213f7ab2111ace655c5ac69153a0db 229 SUPERFAMILY SSF102114 18 199 1.31E-24 T 11-10-2018 Tbd_2170 35213f7ab2111ace655c5ac69153a0db 229 Gene3D G3DSA:3.20.20.70 2 214 6.1E-37 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2170 35213f7ab2111ace655c5ac69153a0db 229 Pfam PF13353 4Fe-4S single cluster domain 19 105 6.8E-9 T 11-10-2018 Tbd_2170 35213f7ab2111ace655c5ac69153a0db 229 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 4 192 1.8E-63 T 11-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Tbd_2170 35213f7ab2111ace655c5ac69153a0db 229 Pfam PF04055 Radical SAM superfamily 22 163 8.6E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0727 d8ddad5a0011101262017c90f974ffd8 359 Gene3D G3DSA:3.20.20.300 1 338 8.6E-117 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Tbd_0727 d8ddad5a0011101262017c90f974ffd8 359 SUPERFAMILY SSF51445 4 296 2.0E-89 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_0727 d8ddad5a0011101262017c90f974ffd8 359 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 342 51.717 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Tbd_0727 d8ddad5a0011101262017c90f974ffd8 359 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 292 1.7E-80 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 SMART SM00965 97 145 1.1E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 Pfam PF07655 Secretin N-terminal domain 149 233 9.1E-21 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 7.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 492 510 7.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 515 529 7.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 369 7.5E-17 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 228 527 1.1E-77 T 11-10-2018 IPR013358 Pilus biogenesis, MshL Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 Gene3D G3DSA:3.55.50.30 61 153 9.4E-7 T 11-10-2018 Tbd_0764 47d893b809c9c17fb4f72ea95ef0d1e8 554 Pfam PF00263 Bacterial type II and III secretion system protein 350 528 8.1E-39 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 Pfam PF01726 LexA DNA binding domain 62 126 4.1E-26 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 TIGRFAM TIGR00498 lexA: repressor LexA 62 257 1.2E-70 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 Gene3D G3DSA:2.10.109.10 139 260 2.3E-43 T 11-10-2018 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 SUPERFAMILY SSF51306 137 256 8.02E-35 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 181 192 1.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 170 180 1.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 209 221 1.7E-12 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 Gene3D G3DSA:1.10.10.10 62 130 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 Pfam PF00717 Peptidase S24-like 173 239 3.4E-13 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 Hamap MF_00015 LexA repressor [lexA]. 64 258 30.48 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Tbd_1483 eff56aa6b70adef53efbf90a58340fea 261 SUPERFAMILY SSF46785 64 130 2.72E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 PRINTS PR01003 Flagellar assembly protein FliH signature 162 178 4.4E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 PRINTS PR01003 Flagellar assembly protein FliH signature 58 76 4.4E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 PRINTS PR01003 Flagellar assembly protein FliH signature 134 161 4.4E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 PRINTS PR01003 Flagellar assembly protein FliH signature 35 57 4.4E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 PRINTS PR01003 Flagellar assembly protein FliH signature 179 204 4.4E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Tbd_1602 5b1e09d8021c8abba0b20b6c1a8915ce 209 Pfam PF02108 Flagellar assembly protein FliH 72 197 5.5E-36 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Tbd_2250 a0c417bdc15ac73234025ec93028a811 71 SUPERFAMILY SSF69047 1 69 1.7E-27 T 11-10-2018 IPR036629 YjbJ superfamily Tbd_2250 a0c417bdc15ac73234025ec93028a811 71 PIRSF PIRSF039008 1 66 7.1E-32 T 11-10-2018 IPR026042 Stress response protein YjbJ Tbd_2250 a0c417bdc15ac73234025ec93028a811 71 Pfam PF05532 CsbD-like 4 56 5.8E-21 T 11-10-2018 IPR008462 CsbD-like domain Tbd_2250 a0c417bdc15ac73234025ec93028a811 71 Gene3D G3DSA:1.10.1470.10 1 69 1.3E-32 T 11-10-2018 IPR036629 YjbJ superfamily Tbd_0658 c53366cc78adb36935732e9f71144d50 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 49 63 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0658 c53366cc78adb36935732e9f71144d50 211 Pfam PF00849 RNA pseudouridylate synthase 12 161 1.8E-25 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0658 c53366cc78adb36935732e9f71144d50 211 Gene3D G3DSA:3.30.2350.10 1 210 1.2E-65 T 11-10-2018 Tbd_0658 c53366cc78adb36935732e9f71144d50 211 SUPERFAMILY SSF55120 3 210 1.02E-59 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1490 a16f61bb9ce2ca99e2034122a191b6b5 226 Pfam PF14487 Domain of unknown function (DUF4433) 10 223 1.3E-62 T 11-10-2018 IPR029494 Domain of unknown function DUF4433 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 Gene3D G3DSA:3.10.310.10 128 274 1.1E-101 T 11-10-2018 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 Gene3D G3DSA:3.10.310.10 16 283 1.1E-101 T 11-10-2018 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 SUPERFAMILY SSF54506 12 287 1.36E-55 T 11-10-2018 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 Pfam PF01678 Diaminopimelate epimerase 16 136 5.7E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 Pfam PF01678 Diaminopimelate epimerase 165 279 9.5E-29 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 15 286 3.5E-93 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 14 287 39.793 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tbd_2526 5fefd22d02d693d9baf925f9a60102eb 288 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 77 91 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Gene3D G3DSA:3.40.50.1100 52 148 7.3E-137 T 11-10-2018 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 321 410 4.7E-23 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 422 504 7.5E-24 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 308 9.6E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 6 504 1.6E-246 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Gene3D G3DSA:3.40.50.1100 16 319 7.3E-137 T 11-10-2018 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 Gene3D G3DSA:3.40.1020.10 330 505 6.9E-74 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 SUPERFAMILY SSF55021 411 504 1.6E-28 T 11-10-2018 Tbd_2363 989f5663221593a6cf06fde2c23d3a86 505 SUPERFAMILY SSF53686 5 357 7.33E-101 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tbd_0798 d213e7f56bc14015f44c89e3c478b668 372 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 369 35.087 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Tbd_0798 d213e7f56bc14015f44c89e3c478b668 372 Gene3D G3DSA:3.40.50.2000 165 345 4.9E-7 T 11-10-2018 Tbd_0798 d213e7f56bc14015f44c89e3c478b668 372 SUPERFAMILY SSF53756 1 368 3.14E-29 T 11-10-2018 Tbd_0798 d213e7f56bc14015f44c89e3c478b668 372 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 363 2.3E-95 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Tbd_0798 d213e7f56bc14015f44c89e3c478b668 372 Pfam PF02684 Lipid-A-disaccharide synthetase 1 343 6.0E-97 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 SUPERFAMILY SSF55874 335 482 5.37E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 SMART SM00388 262 330 1.0E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 Gene3D G3DSA:3.30.565.10 330 482 9.4E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 SUPERFAMILY SSF47384 247 327 6.08E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 SMART SM00304 209 261 0.0021 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 Gene3D G3DSA:1.10.287.130 213 329 6.6E-16 T 11-10-2018 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 481 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 263 328 8.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 SMART SM00387 372 484 2.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2769 801708c931ef81baef4c4cb08458edb4 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 483 2.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1192 3c19ad3225b761a03b88ed6fbb7615f2 147 Gene3D G3DSA:3.40.50.2300 3 145 9.1E-34 T 11-10-2018 Tbd_1192 3c19ad3225b761a03b88ed6fbb7615f2 147 SMART SM00448 4 129 2.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1192 3c19ad3225b761a03b88ed6fbb7615f2 147 Pfam PF00072 Response regulator receiver domain 6 127 1.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1192 3c19ad3225b761a03b88ed6fbb7615f2 147 SUPERFAMILY SSF52172 3 130 4.7E-32 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2642 12293cb496eb8271c19cb29567a03003 89 SUPERFAMILY SSF55248 6 85 1.18E-16 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_2642 12293cb496eb8271c19cb29567a03003 89 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 8 65 4.0E-10 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_2642 12293cb496eb8271c19cb29567a03003 89 Gene3D G3DSA:3.30.1360.20 5 88 9.0E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 SUPERFAMILY SSF53383 1 451 3.95E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 450 44.349 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 Pfam PF02347 Glycine cleavage system P-protein 3 443 9.4E-120 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 Gene3D G3DSA:3.90.1150.10 68 447 1.1E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 PIRSF PIRSF006815 1 451 1.3E-157 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Tbd_0176 7a602bc2d9503dd9b1dbe54cf0400fc2 464 Gene3D G3DSA:3.40.640.10 79 346 1.1E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1272 ec89e69366593d5e043436f8b276f2f2 115 Gene3D G3DSA:3.40.30.10 1 113 1.7E-37 T 11-10-2018 Tbd_1272 ec89e69366593d5e043436f8b276f2f2 115 SUPERFAMILY SSF52833 1 113 9.7E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1272 ec89e69366593d5e043436f8b276f2f2 115 Pfam PF03960 ArsC family 4 111 1.5E-16 T 11-10-2018 IPR006660 Arsenate reductase-like Tbd_1272 ec89e69366593d5e043436f8b276f2f2 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 111 3.6E-24 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 SMART SM00072 3 183 2.5E-6 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 3 180 37.183 T 11-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 Pfam PF00625 Guanylate kinase 6 179 2.8E-5 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 Gene3D G3DSA:3.40.50.300 9 177 2.5E-20 T 11-10-2018 Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 SUPERFAMILY SSF52540 2 182 4.61E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 Gene3D G3DSA:3.30.63.10 38 93 2.5E-20 T 11-10-2018 Tbd_2289 d46b1ae0a8d3f20800cda2088e0d5be1 190 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 4 180 4.8E-69 T 11-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_0803 72e01fb977d8f5e6723eb0e835d8ac0d 300 Pfam PF00413 Matrixin 148 198 5.9E-7 T 11-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 Tbd_0803 72e01fb977d8f5e6723eb0e835d8ac0d 300 SUPERFAMILY SSF55486 102 268 1.17E-24 T 11-10-2018 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 Pfam PF01709 Transcriptional regulator 5 239 2.2E-97 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 241 35.7 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 6.8E-95 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 SUPERFAMILY SSF75625 3 241 3.53E-96 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 Gene3D G3DSA:1.10.10.200 1 81 2.1E-36 T 11-10-2018 IPR017856 Integrase-like, N-terminal Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 Gene3D G3DSA:3.30.70.980 130 207 4.7E-54 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2215 4901a52bea8fa65a74da01cef7b0fe12 243 Gene3D G3DSA:3.30.70.980 86 238 4.7E-54 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0953 4f64225f5bf1b9995f5b4907ad17d5a2 288 Pfam PF02153 Prephenate dehydrogenase 18 272 6.0E-75 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Tbd_0953 4f64225f5bf1b9995f5b4907ad17d5a2 288 Gene3D G3DSA:1.10.3660.10 178 282 2.7E-35 T 11-10-2018 Tbd_0953 4f64225f5bf1b9995f5b4907ad17d5a2 288 SUPERFAMILY SSF51735 5 169 2.14E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0953 4f64225f5bf1b9995f5b4907ad17d5a2 288 Gene3D G3DSA:3.40.50.720 3 177 3.3E-55 T 11-10-2018 Tbd_0953 4f64225f5bf1b9995f5b4907ad17d5a2 288 SUPERFAMILY SSF48179 174 283 1.13E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_1253 ab63f23faea123f69ae3eadcbed34b0a 203 Pfam PF13686 DsrE/DsrF/DrsH-like family 39 202 4.3E-50 T 11-10-2018 IPR032836 DsrE2-like family Tbd_1253 ab63f23faea123f69ae3eadcbed34b0a 203 Gene3D G3DSA:3.40.1260.10 36 203 5.1E-35 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1253 ab63f23faea123f69ae3eadcbed34b0a 203 SUPERFAMILY SSF75169 40 201 2.24E-15 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2093 24277e1ab390b724db00a20a61cec189 318 Gene3D G3DSA:3.30.200.100 222 318 2.3E-15 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily Tbd_2093 24277e1ab390b724db00a20a61cec189 318 Gene3D G3DSA:2.50.20.10 28 208 4.8E-54 T 11-10-2018 Tbd_2093 24277e1ab390b724db00a20a61cec189 318 Pfam PF17188 MucB/RseB C-terminal domain 225 315 6.9E-18 T 11-10-2018 IPR033436 MucB/RseB, C-terminal Tbd_2093 24277e1ab390b724db00a20a61cec189 318 PIRSF PIRSF005427 1 318 5.0E-102 T 11-10-2018 IPR005588 MucB/RseB Tbd_2093 24277e1ab390b724db00a20a61cec189 318 Pfam PF03888 MucB/RseB N-terminal domain 30 201 8.7E-52 T 11-10-2018 IPR033434 MucB/RseB, N-terminal Tbd_0769 59f5999e03df6512295b554e96763bd4 257 Gene3D G3DSA:1.10.472.150 21 142 2.3E-41 T 11-10-2018 Tbd_0769 59f5999e03df6512295b554e96763bd4 257 SUPERFAMILY SSF55486 39 248 7.32E-42 T 11-10-2018 Tbd_0769 59f5999e03df6512295b554e96763bd4 257 Gene3D G3DSA:3.40.390.10 145 257 1.2E-40 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Tbd_0769 59f5999e03df6512295b554e96763bd4 257 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 246 5.9E-90 T 11-10-2018 IPR010384 MtfA family Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Gene3D G3DSA:2.10.230.10 146 206 3.8E-38 T 11-10-2018 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Gene3D G3DSA:2.60.260.20 253 361 6.0E-31 T 11-10-2018 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 SUPERFAMILY SSF57938 133 210 1.83E-22 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Pfam PF01556 DnaJ C terminal domain 120 332 3.0E-44 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 PRINTS PR00625 DnaJ domain signature 62 81 2.2E-32 T 11-10-2018 IPR001623 DnaJ domain Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 PRINTS PR00625 DnaJ domain signature 42 62 2.2E-32 T 11-10-2018 IPR001623 DnaJ domain Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 PRINTS PR00625 DnaJ domain signature 7 25 2.2E-32 T 11-10-2018 IPR001623 DnaJ domain Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 PRINTS PR00625 DnaJ domain signature 25 40 2.2E-32 T 11-10-2018 IPR001623 DnaJ domain Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Gene3D G3DSA:1.10.287.110 1 112 1.3E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 369 42.681 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 SUPERFAMILY SSF49493 257 343 7.98E-24 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 SMART SM00271 4 62 7.0E-32 T 11-10-2018 IPR001623 DnaJ domain Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 SUPERFAMILY SSF49493 113 261 3.66E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 SUPERFAMILY SSF46565 1 107 6.15E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Pfam PF00684 DnaJ central domain 146 206 7.4E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.5E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Gene3D G3DSA:2.60.260.20 116 248 3.8E-38 T 11-10-2018 Tbd_1539 98db1bc11f27b97c605a00fe681bdbcb 372 Pfam PF00226 DnaJ domain 5 67 5.6E-28 T 11-10-2018 IPR001623 DnaJ domain Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 Pfam PF05239 PRC-barrel domain 118 184 3.1E-8 T 11-10-2018 IPR027275 PRC-barrel domain Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 Pfam PF01782 RimM N-terminal domain 31 111 9.1E-23 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 Gene3D G3DSA:2.30.30.240 117 189 4.2E-26 T 11-10-2018 Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 Gene3D G3DSA:2.40.30.60 20 115 6.8E-28 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 28 188 8.9E-49 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 SUPERFAMILY SSF50346 121 188 2.35E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 28 189 25.203 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tbd_2374 b8dd732c25ae6f48a12f1c82a7d61c8b 189 SUPERFAMILY SSF50447 28 115 3.5E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 Pfam PF00589 Phage integrase family 237 400 1.4E-25 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 SUPERFAMILY SSF56349 130 410 3.83E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 Pfam PF13356 Arm DNA-binding domain 3 87 4.0E-13 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 Gene3D G3DSA:3.30.160.390 1 104 1.0E-23 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 Gene3D G3DSA:1.10.443.10 237 413 5.8E-23 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2823 eb46ec9de927ac301a649e20144f1050 440 Gene3D G3DSA:1.10.150.130 123 234 8.6E-27 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_1622 077f5b7590c67a42f513fbd102154382 572 Pfam PF02203 Tar ligand binding domain homologue 3 180 1.1E-29 T 11-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 SUPERFAMILY SSF58104 240 521 3.53E-79 T 11-10-2018 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 488 1.3E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 Pfam PF00672 HAMP domain 220 263 1.5E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 Gene3D G3DSA:1.10.287.950 219 522 7.9E-96 T 11-10-2018 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 SMART SM00304 220 272 3.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 4.4E-62 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 4.4E-62 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 4.4E-62 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 4.4E-62 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 294 323 4.4E-62 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_1622 077f5b7590c67a42f513fbd102154382 572 SMART SM00283 273 520 5.2E-98 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_1502 db368160f3ac7461f58553dac0732034 418 Gene3D G3DSA:3.40.50.450 6 399 1.0E-147 T 11-10-2018 Tbd_1502 db368160f3ac7461f58553dac0732034 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 4 398 42.843 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Tbd_1502 db368160f3ac7461f58553dac0732034 418 PIRSF PIRSF036483 3 417 7.4E-202 T 11-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Tbd_1502 db368160f3ac7461f58553dac0732034 418 SUPERFAMILY SSF53784 2 415 1.57E-105 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1502 db368160f3ac7461f58553dac0732034 418 Gene3D G3DSA:3.40.50.460 143 386 1.0E-147 T 11-10-2018 Tbd_1502 db368160f3ac7461f58553dac0732034 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 196 1.1E-8 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1502 db368160f3ac7461f58553dac0732034 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 155 1.1E-8 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1502 db368160f3ac7461f58553dac0732034 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 257 279 1.1E-8 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1502 db368160f3ac7461f58553dac0732034 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 1.1E-8 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1502 db368160f3ac7461f58553dac0732034 418 Pfam PF00365 Phosphofructokinase 11 323 1.1E-44 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tbd_1407 f4d6b42977e70878758fcb156fdd991c 532 SUPERFAMILY SSF51905 16 166 2.46E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1407 f4d6b42977e70878758fcb156fdd991c 532 Gene3D G3DSA:3.50.50.100 15 423 4.5E-114 T 11-10-2018 Tbd_1407 f4d6b42977e70878758fcb156fdd991c 532 SUPERFAMILY SSF51905 15 315 1.27E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1407 f4d6b42977e70878758fcb156fdd991c 532 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 322 3.7E-17 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_0501 a4f866014726ada43b46f4eb2419262e 338 Gene3D G3DSA:1.20.1420.30 38 326 8.9E-40 T 11-10-2018 Tbd_0501 a4f866014726ada43b46f4eb2419262e 338 Gene3D G3DSA:1.20.58.1130 12 217 8.9E-40 T 11-10-2018 Tbd_0501 a4f866014726ada43b46f4eb2419262e 338 Pfam PF01699 Sodium/calcium exchanger protein 8 153 1.0E-13 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_0501 a4f866014726ada43b46f4eb2419262e 338 Pfam PF01699 Sodium/calcium exchanger protein 190 333 3.1E-14 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 SUPERFAMILY SSF51649 143 469 1.83E-145 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 Gene3D G3DSA:3.20.20.110 143 473 2.8E-155 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 Gene3D G3DSA:3.30.70.150 15 141 3.7E-49 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 17 137 1.2E-43 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 11-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 6.2E-132 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 SUPERFAMILY SSF54966 5 141 2.49E-56 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_2624 71a3f4cd074811259b485422eb743cad 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 59.981 T 11-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tbd_1079 9d31f778feb1edc788733ae5324b3965 67 Pfam PF06348 Protein of unknown function (DUF1059) 6 58 1.6E-13 T 11-10-2018 IPR009409 Protein of unknown function DUF1059 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 Gene3D G3DSA:3.90.79.10 2 142 8.1E-38 T 11-10-2018 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 SUPERFAMILY SSF55811 6 143 7.72E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 69 88 2.9E-10 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 2.9E-10 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 2.9E-10 T 11-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_0444 6ca1b8fff4340b0cd90deb6768cc0cda 146 Pfam PF00293 NUDIX domain 7 129 4.5E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_2212 0b23d9c622c424e7ceaea4508a7e5796 501 Gene3D G3DSA:3.30.70.270 318 492 2.1E-48 T 11-10-2018 Tbd_2212 0b23d9c622c424e7ceaea4508a7e5796 501 SUPERFAMILY SSF55073 337 491 1.88E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2212 0b23d9c622c424e7ceaea4508a7e5796 501 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 488 1.7E-41 T 11-10-2018 IPR000160 GGDEF domain Tbd_2212 0b23d9c622c424e7ceaea4508a7e5796 501 SMART SM00267 321 492 2.5E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_2212 0b23d9c622c424e7ceaea4508a7e5796 501 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 491 2.2E-38 T 11-10-2018 IPR000160 GGDEF domain Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 Pfam PF00764 Arginosuccinate synthase 55 448 1.3E-151 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 SUPERFAMILY SSF69864 227 451 1.15E-92 T 11-10-2018 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 Gene3D G3DSA:3.40.50.620 54 226 3.8E-156 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 Gene3D G3DSA:3.90.1260.10 114 407 3.8E-156 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 TIGRFAM TIGR00032 argG: argininosuccinate synthase 53 448 1.2E-140 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 Gene3D G3DSA:1.20.5.470 428 453 1.7E-10 T 11-10-2018 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 Hamap MF_00005 Argininosuccinate synthase [argG]. 51 453 51.344 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 167 178 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 SUPERFAMILY SSF52402 52 217 1.7E-46 T 11-10-2018 Tbd_1849 73bc0b8d11fcd38c3a690bcd31633784 456 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 57 65 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 158 8.0E-74 T 11-10-2018 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 Pfam PF01220 Dehydroquinase class II 20 157 4.0E-59 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 SUPERFAMILY SSF52304 20 164 1.7E-60 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 PIRSF PIRSF001399 18 164 5.0E-58 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 172 73.282 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 ProSitePatterns PS01029 Dehydroquinase class II signature. 24 41 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 20 159 1.1E-59 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0183 aa2f08f27b9a9687157615b89139f819 172 Gene3D G3DSA:3.40.50.9100 6 166 3.7E-65 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 393 1.9E-96 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 6.4E-188 T 11-10-2018 IPR004482 Mg chelatase-related protein Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 3.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 3.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 3.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 3.2E-6 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 Gene3D G3DSA:3.30.230.10 31 169 5.2E-6 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 SUPERFAMILY SSF52540 189 493 8.15E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 SMART SM00382 209 390 3.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 9.5E-32 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 SUPERFAMILY SSF54211 2 169 5.69E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 140 5.1E-44 T 11-10-2018 Tbd_0237 42ce2bce2d7ed142cf41ac9f7223c0c6 495 Gene3D G3DSA:3.40.50.300 190 495 1.3E-57 T 11-10-2018 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Pfam PF02222 ATP-grasp domain 123 299 4.0E-51 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Gene3D G3DSA:3.40.50.20 1 122 1.3E-50 T 11-10-2018 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Gene3D G3DSA:3.30.1490.20 123 196 3.0E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 7 396 50.456 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 SUPERFAMILY SSF56059 113 318 1.13E-56 T 11-10-2018 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Gene3D G3DSA:3.30.470.20 197 396 1.9E-60 T 11-10-2018 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 394 1.2E-167 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 SUPERFAMILY SSF51246 324 394 1.37E-17 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 79 1.3E-4 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_0775 4618257bdd4cae6f65b609649f756c2e 398 SUPERFAMILY SSF52440 3 112 9.93E-31 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.4E-18 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 Gene3D G3DSA:1.10.287.310 1 62 1.4E-22 T 11-10-2018 Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.113 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 Pfam PF00831 Ribosomal L29 protein 4 60 2.8E-18 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0413 956adeba9c5a4ea6b4a0327c53e30907 64 SUPERFAMILY SSF46561 1 61 8.9E-18 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.5E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 Gene3D G3DSA:4.10.520.10 1 90 5.8E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 SMART SM00411 1 90 3.9E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_1674 654def079f5f33e029346ff7e3cf6913 90 SUPERFAMILY SSF47729 1 90 6.18E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_2784 17c526dbf86209df9e7921152b843109 216 Pfam PF01323 DSBA-like thioredoxin domain 90 183 2.2E-13 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Tbd_2784 17c526dbf86209df9e7921152b843109 216 Gene3D G3DSA:3.40.30.10 25 215 4.3E-53 T 11-10-2018 Tbd_2784 17c526dbf86209df9e7921152b843109 216 PIRSF PIRSF001488 2 209 1.3E-44 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Tbd_2784 17c526dbf86209df9e7921152b843109 216 SUPERFAMILY SSF52833 27 203 9.2E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 369 383 6.0E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 346 368 6.0E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 143 162 6.0E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 88 100 6.0E-21 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 SUPERFAMILY SSF53335 62 420 2.82E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 PIRSF PIRSF015855 9 477 2.5E-113 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 91 97 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_2276 ee55b04e54d61652d261e840bb6be67d 559 Pfam PF01555 DNA methylase 88 405 1.2E-44 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 SUPERFAMILY SSF53218 5 177 2.22E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 Gene3D G3DSA:3.40.980.10 4 183 1.0E-57 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 148 1.5E-37 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 71 84 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 SMART SM00852 9 155 6.3E-25 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_2143 fb187745f99be9941e949f1cd4c26d74 184 Pfam PF00994 Probable molybdopterin binding domain 10 149 2.8E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 Pfam PF01467 Cytidylyltransferase-like 5 133 5.1E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 1.0E-56 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 7.8E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 7.8E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 7.8E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 7.8E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 7.8E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 Gene3D G3DSA:3.40.50.620 1 160 3.2E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 2.0E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.08 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tbd_0380 d62c93547d8518451055b3c5d1df0320 160 SUPERFAMILY SSF52374 1 155 5.09E-43 T 11-10-2018 Tbd_1643 6a379bb7feffec7b22a5dda6d0b0cac3 170 Pfam PF01613 Flavin reductase like domain 14 140 7.1E-29 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tbd_1643 6a379bb7feffec7b22a5dda6d0b0cac3 170 SUPERFAMILY SSF50475 7 151 1.08E-42 T 11-10-2018 Tbd_1643 6a379bb7feffec7b22a5dda6d0b0cac3 170 Gene3D G3DSA:2.30.110.10 8 157 3.8E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_1643 6a379bb7feffec7b22a5dda6d0b0cac3 170 SMART SM00903 11 158 2.7E-39 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 SMART SM00851 15 129 5.3E-60 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Gene3D G3DSA:3.40.140.20 384 519 1.5E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Pfam PF02142 MGS-like domain 15 128 1.4E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 519 45.331 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 PIRSF PIRSF000414 1 519 3.4E-220 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Gene3D G3DSA:3.40.140.20 209 364 5.2E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 519 6.9E-226 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 SUPERFAMILY SSF52335 3 194 8.11E-70 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Gene3D G3DSA:3.40.50.1380 1 198 3.0E-86 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 SUPERFAMILY SSF53927 212 519 5.31E-125 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 SMART SM00798 134 451 5.8E-200 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2458 a7a7ee44d26081a5283324f99934eb01 519 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 450 6.7E-114 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_1295 4202132950520b8ef5ff2412850c3179 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_1295 4202132950520b8ef5ff2412850c3179 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 143 1.6E-10 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tbd_1295 4202132950520b8ef5ff2412850c3179 566 Gene3D G3DSA:3.40.50.300 292 565 1.3E-103 T 11-10-2018 Tbd_1295 4202132950520b8ef5ff2412850c3179 566 SUPERFAMILY SSF52540 172 563 1.68E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1295 4202132950520b8ef5ff2412850c3179 566 Gene3D G3DSA:3.30.450.90 147 283 6.4E-42 T 11-10-2018 Tbd_1295 4202132950520b8ef5ff2412850c3179 566 Pfam PF00437 Type II/IV secretion system protein 186 455 4.3E-74 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_1295 4202132950520b8ef5ff2412850c3179 566 SUPERFAMILY SSF160246 15 137 1.12E-16 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 SUPERFAMILY SSF53686 4 292 1.7E-91 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 284 6.8E-66 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 295 1.7E-148 T 11-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 295 4.9E-124 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 Gene3D G3DSA:3.40.50.1100 38 143 5.0E-112 T 11-10-2018 Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Tbd_0964 915d08baf9aa1201c3e6cd404501da88 297 Gene3D G3DSA:3.40.50.1100 10 291 5.0E-112 T 11-10-2018 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 4.1E-33 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 319 3.1E-36 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 SUPERFAMILY SSF53901 3 319 7.54E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 318 2.8E-137 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 Gene3D G3DSA:3.40.47.10 1 319 6.0E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_1551 1dc4c0afebfc8b6084659dcfb22f56aa 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 319 71.93 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tbd_0774 64b403ec9492c783fc9eb30a7600f80f 126 Gene3D G3DSA:1.10.490.10 1 126 3.1E-45 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Tbd_0774 64b403ec9492c783fc9eb30a7600f80f 126 Pfam PF01152 Bacterial-like globin 4 121 5.0E-40 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Tbd_0774 64b403ec9492c783fc9eb30a7600f80f 126 SUPERFAMILY SSF46458 3 124 8.96E-38 T 11-10-2018 IPR009050 Globin-like superfamily Tbd_1579 92d9b48116a762eec17cc8a7e7c5711a 84 Pfam PF04457 Protein of unknown function (DUF504) 24 82 3.7E-15 T 11-10-2018 IPR007547 Uncharacterised protein family UPF0248 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 Gene3D G3DSA:3.30.450.40 308 469 2.3E-10 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 SMART SM00065 322 469 0.0083 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 580 683 1.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 SUPERFAMILY SSF55781 324 463 1.16E-12 T 11-10-2018 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 Gene3D G3DSA:3.30.565.10 540 681 4.3E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 628 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 SMART SM00387 577 684 1.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 SUPERFAMILY SSF55874 551 682 5.37E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 Pfam PF13185 GAF domain 324 459 1.5E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 Gene3D G3DSA:1.10.287.130 484 539 4.3E-34 T 11-10-2018 Tbd_0198 f4b16bbe5355534fed34f1b1ea8a5295 693 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 11 681 0.0 T 11-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 SUPERFAMILY SSF56925 100 249 1.36E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 359 376 4.8E-10 T 11-10-2018 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 397 415 4.8E-10 T 11-10-2018 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 377 396 4.8E-10 T 11-10-2018 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 Pfam PF13505 Outer membrane protein beta-barrel domain 86 248 1.2E-15 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 Pfam PF00691 OmpA family 313 408 3.8E-23 T 11-10-2018 IPR006665 OmpA-like domain Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 SUPERFAMILY SSF103088 295 414 2.49E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 Gene3D G3DSA:3.30.1330.60 283 415 4.2E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01021 OMPA domain signature 314 336 4.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01021 OMPA domain signature 359 375 4.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 PRINTS PR01021 OMPA domain signature 344 359 4.5E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_0127 cd33649792b1aaf55a384e5366979bf9 415 Gene3D G3DSA:2.40.160.20 91 251 1.2E-25 T 11-10-2018 Tbd_0324 1537a62f595b4cdc95baef276cab259a 161 Pfam PF10003 Integral membrane protein (DUF2244) 22 159 1.0E-36 T 11-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 SMART SM00382 56 172 2.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Pfam PF16193 AAA C-terminal domain 191 266 1.7E-20 T 11-10-2018 IPR032423 AAA C-terminal domain Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Gene3D G3DSA:3.40.50.300 16 171 2.3E-44 T 11-10-2018 Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 60 165 1.4E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Pfam PF12002 MgsA AAA+ ATPase C terminal 267 433 3.6E-68 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 SUPERFAMILY SSF48019 251 433 3.12E-74 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 SUPERFAMILY SSF52540 20 225 2.01E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Gene3D G3DSA:1.10.3710.10 345 442 2.6E-36 T 11-10-2018 Tbd_1496 75fd26e7b76aa1f641fbb19f7b7f2722 442 Gene3D G3DSA:1.20.272.10 241 344 1.9E-42 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 295 308 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 47 62 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 82 95 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 755 771 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 129 143 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 447 461 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 514 530 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 552 564 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR00418 DNA topoisomerase II family signature 532 549 5.7E-69 T 11-10-2018 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SUPERFAMILY SSF54211 248 418 1.14E-58 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SUPERFAMILY SSF56719 706 814 4.71E-19 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 ProSitePatterns PS00177 DNA topoisomerase II signature. 449 457 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Gene3D G3DSA:3.40.50.670 425 612 9.5E-73 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SUPERFAMILY SSF55874 17 241 7.6E-62 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 202 4.3E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SMART SM00433 47 816 1.6E-248 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Pfam PF00204 DNA gyrase B 248 417 1.2E-57 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Gene3D G3DSA:3.40.50.670 705 820 5.7E-27 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Gene3D G3DSA:3.30.230.10 248 419 3.2E-73 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 497 506 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 208 223 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 247 269 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 17 27 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 387 401 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 223 236 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 401 421 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 792 808 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 339 355 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 PRINTS PR01159 DNA gyrase subunit B signature 776 788 5.3E-72 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 823 1.6E-292 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SMART SM00387 43 203 1.8E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Gene3D G3DSA:3.30.565.10 14 247 1.4E-84 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Pfam PF01751 Toprim domain 446 558 2.0E-17 T 11-10-2018 IPR006171 TOPRIM domain Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 751 812 2.1E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 823 99.257 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tbd_0003 6cf63736af85a88409cecb7a6aac7d41 823 SUPERFAMILY SSF56719 421 586 1.33E-66 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 93 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 112 4.9E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 56 252 3.6E-93 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 Pfam PF00813 FliP family 56 248 4.6E-81 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 138 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 52 61 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1610 0c084a07bcfcb1aca104102e42e1240d 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 124 9.2E-34 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_0281 431b42e31eefeadec9d48690bb7148a4 207 Pfam PF02563 Polysaccharide biosynthesis/export protein 41 112 4.5E-19 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Tbd_0281 431b42e31eefeadec9d48690bb7148a4 207 Gene3D G3DSA:3.10.560.10 116 204 6.5E-16 T 11-10-2018 Tbd_0281 431b42e31eefeadec9d48690bb7148a4 207 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 43 207 1.2E-74 T 11-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein Tbd_0281 431b42e31eefeadec9d48690bb7148a4 207 Gene3D G3DSA:3.30.1950.10 48 114 4.1E-10 T 11-10-2018 Tbd_0281 431b42e31eefeadec9d48690bb7148a4 207 Pfam PF10531 SLBB domain 123 170 5.4E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0720 74fb8759f9d1893af4f021a887cf9c69 640 Pfam PF06276 Ferric iron reductase FhuF-like transporter 451 601 5.8E-15 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain Tbd_0720 74fb8759f9d1893af4f021a887cf9c69 640 Gene3D G3DSA:1.10.510.40 416 587 8.4E-8 T 11-10-2018 Tbd_0720 74fb8759f9d1893af4f021a887cf9c69 640 Pfam PF04183 IucA / IucC family 205 428 3.0E-39 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 SUPERFAMILY SSF69721 1 111 1.96E-44 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 1.2E-51 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 Pfam PF04358 DsrC like protein 6 111 9.5E-49 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 PIRSF PIRSF006223 4 111 6.0E-46 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 Gene3D G3DSA:1.10.10.370 41 111 3.0E-36 T 11-10-2018 Tbd_2480 38ac810ce026bf44d2277a84d02ec395 111 Gene3D G3DSA:3.30.1420.10 1 40 2.3E-13 T 11-10-2018 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 Pfam PF04055 Radical SAM superfamily 82 241 1.5E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 Hamap MF_00206 Lipoyl synthase [lipA]. 1 311 156.895 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 SUPERFAMILY SSF102114 43 305 1.16E-67 T 11-10-2018 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 PIRSF PIRSF005963 3 310 1.0E-128 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 SMART SM00729 74 279 9.9E-17 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 22 63 1.4E-9 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 TIGRFAM TIGR00510 lipA: lipoyl synthase 23 305 1.5E-133 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Tbd_0274 af325e2d65ef978e7dc1c9e6f437a039 311 Gene3D G3DSA:3.20.20.70 72 304 9.3E-18 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 30 483 2.6E-142 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 Pfam PF02867 Ribonucleotide reductase, barrel domain 83 483 7.3E-112 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 SUPERFAMILY SSF51998 4 583 4.27E-154 T 11-10-2018 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 322 345 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 470 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 158 177 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 284 295 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 360 382 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 PRINTS PR01183 Ribonucleotide reductase large chain signature 388 411 3.7E-31 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 Pfam PF02867 Ribonucleotide reductase, barrel domain 514 572 7.4E-11 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 12 76 2.4E-6 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0058 d8f4685881efa41009500e9e6890c33d 600 Gene3D G3DSA:3.20.70.20 3 587 1.4E-169 T 11-10-2018 Tbd_1777 4d861115b8912f6c4189f7526746eec9 297 SUPERFAMILY SSF51735 4 292 4.19E-99 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1777 4d861115b8912f6c4189f7526746eec9 297 Gene3D G3DSA:3.40.50.720 5 282 6.4E-111 T 11-10-2018 Tbd_1777 4d861115b8912f6c4189f7526746eec9 297 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 292 4.1E-101 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Tbd_1777 4d861115b8912f6c4189f7526746eec9 297 Gene3D G3DSA:3.90.25.10 160 288 6.4E-111 T 11-10-2018 Tbd_1777 4d861115b8912f6c4189f7526746eec9 297 Pfam PF04321 RmlD substrate binding domain 4 293 7.9E-107 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Tbd_2314 85decdbb915c55d8f7ed1170da0c24cc 122 Gene3D G3DSA:3.30.479.10 1 118 4.9E-40 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Tbd_2314 85decdbb915c55d8f7ed1170da0c24cc 122 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 7.6E-30 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_2314 85decdbb915c55d8f7ed1170da0c24cc 122 SUPERFAMILY SSF55620 3 118 5.39E-34 T 11-10-2018 Tbd_2314 85decdbb915c55d8f7ed1170da0c24cc 122 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 118 6.2E-31 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_2314 85decdbb915c55d8f7ed1170da0c24cc 122 PIRSF PIRSF006113 1 118 3.5E-36 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_1866 879f43297776720d226a2aed45e94e48 368 SUPERFAMILY SSF54373 215 300 5.36E-21 T 11-10-2018 Tbd_1866 879f43297776720d226a2aed45e94e48 368 Gene3D G3DSA:3.50.50.60 6 341 9.7E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1866 879f43297776720d226a2aed45e94e48 368 SUPERFAMILY SSF51905 5 358 1.81E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1866 879f43297776720d226a2aed45e94e48 368 Pfam PF01266 FAD dependent oxidoreductase 5 341 5.1E-65 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tbd_1866 879f43297776720d226a2aed45e94e48 368 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 6 345 3.7E-84 T 11-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 Tbd_1866 879f43297776720d226a2aed45e94e48 368 Gene3D G3DSA:3.30.9.10 90 301 9.7E-84 T 11-10-2018 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 33 458 2.8E-157 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 PIRSF PIRSF000521 45 461 9.6E-20 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 Gene3D G3DSA:3.90.1150.10 31 453 3.2E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 Gene3D G3DSA:3.40.640.10 83 366 3.2E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 Pfam PF00202 Aminotransferase class-III 47 458 1.8E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tbd_0093 93921d1bfadfe7a0c486deb5aaeca08d 464 SUPERFAMILY SSF53383 23 460 5.29E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 16 28 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 129 146 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 34 50 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 150 175 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 110 126 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 PRINTS PR01217 Proline rich extensin signature 87 108 1.7E-9 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 200 278 3.8E-23 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 SUPERFAMILY SSF74653 197 276 5.49E-22 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 Gene3D G3DSA:3.30.1150.10 152 279 3.9E-24 T 11-10-2018 Tbd_0713 e4d017f05204e34d477f1223adf23746 280 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 202 278 5.9E-21 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 418 31.104 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 1.1E-147 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 PIRSF PIRSF001549 1 419 1.2E-107 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 Pfam PF13393 Histidyl-tRNA synthetase 10 311 2.2E-46 T 11-10-2018 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 SUPERFAMILY SSF55681 5 316 2.39E-98 T 11-10-2018 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 Gene3D G3DSA:3.30.930.10 2 321 7.8E-115 T 11-10-2018 Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 Gene3D G3DSA:3.40.50.800 327 419 7.7E-23 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 Pfam PF03129 Anticodon binding domain 329 418 1.6E-10 T 11-10-2018 IPR004154 Anticodon-binding Tbd_0595 05f7b97693f4bd0a3488fed45f710317 419 SUPERFAMILY SSF52954 326 418 3.32E-20 T 11-10-2018 Tbd_1748 673a594dd79d53ba8b462a3d9a7634b8 395 Pfam PF02321 Outer membrane efflux protein 212 390 2.1E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1748 673a594dd79d53ba8b462a3d9a7634b8 395 Pfam PF02321 Outer membrane efflux protein 23 202 4.4E-14 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1748 673a594dd79d53ba8b462a3d9a7634b8 395 SUPERFAMILY SSF56954 1 394 1.57E-44 T 11-10-2018 Tbd_1748 673a594dd79d53ba8b462a3d9a7634b8 395 Gene3D G3DSA:1.20.1600.10 16 394 2.7E-42 T 11-10-2018 Tbd_1033 ec609815fd1bfe38b7b4c1305e72e6c6 667 Pfam PF12392 Collagenase 403 517 1.6E-21 T 11-10-2018 IPR020988 Peptidase U32, collagenase Tbd_1033 ec609815fd1bfe38b7b4c1305e72e6c6 667 Pfam PF01136 Peptidase family U32 86 314 4.4E-70 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tbd_1033 ec609815fd1bfe38b7b4c1305e72e6c6 667 ProSitePatterns PS01276 Peptidase family U32 signature. 170 188 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tbd_1955 6838966e7c4cc1f3b3870b857a170b5d 326 Gene3D G3DSA:3.40.50.300 1 310 2.9E-88 T 11-10-2018 Tbd_1955 6838966e7c4cc1f3b3870b857a170b5d 326 PRINTS PR00478 Phosphoribulokinase family signature 126 144 3.3E-5 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_1955 6838966e7c4cc1f3b3870b857a170b5d 326 PRINTS PR00478 Phosphoribulokinase family signature 12 29 3.3E-5 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Tbd_1955 6838966e7c4cc1f3b3870b857a170b5d 326 SUPERFAMILY SSF52540 3 305 1.0E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1955 6838966e7c4cc1f3b3870b857a170b5d 326 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 236 5.8E-46 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 SUPERFAMILY SSF142695 204 358 2.09E-45 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 SUPERFAMILY SSF55821 4 203 4.81E-85 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 Gene3D G3DSA:3.40.50.10990 207 359 5.5E-23 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 PIRSF PIRSF001259 1 359 5.5E-117 T 11-10-2018 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.331 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.2E-83 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 Gene3D G3DSA:3.90.870.10 1 206 4.7E-87 T 11-10-2018 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 8 199 2.5E-72 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2190 9979c7adbc07e23327b8a1c260310c1b 361 Pfam PF00925 GTP cyclohydrolase II 210 357 5.2E-33 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.5E-96 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 350 5.0E-195 T 11-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 4.0E-93 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 Gene3D G3DSA:3.20.20.70 1 355 7.1E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 SUPERFAMILY SSF51569 3 329 5.27E-107 T 11-10-2018 Tbd_0163 7ad45d5cfb0a18ac7782c02fbe006992 355 PIRSF PIRSF001359 1 329 1.3E-81 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tbd_1928 96cee8aeaeab2322f79326884030c4de 275 Gene3D G3DSA:3.40.50.300 21 267 5.2E-62 T 11-10-2018 Tbd_1928 96cee8aeaeab2322f79326884030c4de 275 PIRSF PIRSF003092 7 275 3.8E-71 T 11-10-2018 IPR025501 ATP binding protein MinD Tbd_1928 96cee8aeaeab2322f79326884030c4de 275 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 265 1.2E-18 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tbd_1928 96cee8aeaeab2322f79326884030c4de 275 SUPERFAMILY SSF52540 21 270 4.84E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2746 d1967eff4d3c18e43441387e788d054f 443 Pfam PF00501 AMP-binding enzyme 8 354 1.1E-22 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tbd_2746 d1967eff4d3c18e43441387e788d054f 443 Gene3D G3DSA:3.40.50.12780 5 330 1.4E-27 T 11-10-2018 Tbd_2746 d1967eff4d3c18e43441387e788d054f 443 SUPERFAMILY SSF56801 7 440 1.83E-53 T 11-10-2018 Tbd_2746 d1967eff4d3c18e43441387e788d054f 443 Gene3D G3DSA:3.30.300.30 336 442 1.5E-13 T 11-10-2018 Tbd_2746 d1967eff4d3c18e43441387e788d054f 443 Pfam PF13193 AMP-binding enzyme C-terminal domain 374 428 1.6E-5 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Tbd_1704 551292271e577ae3be2cfeebc61f87c7 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 9.4E-24 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tbd_1704 551292271e577ae3be2cfeebc61f87c7 70 Pfam PF02416 mttA/Hcf106 family 5 49 6.2E-15 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Tbd_1704 551292271e577ae3be2cfeebc61f87c7 70 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 61 22.515 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tbd_2019 149045cdc059374d8a7b35b40f5ed356 216 SMART SM00900 106 198 3.9E-34 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_2019 149045cdc059374d8a7b35b40f5ed356 216 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 15 199 7.9E-56 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Tbd_2019 149045cdc059374d8a7b35b40f5ed356 216 Pfam PF04205 FMN-binding domain 106 196 1.0E-17 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_2019 149045cdc059374d8a7b35b40f5ed356 216 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 7 200 25.169 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Tbd_2019 149045cdc059374d8a7b35b40f5ed356 216 PIRSF PIRSF006091 1 212 6.0E-72 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 Pfam PF01597 Glycine cleavage H-protein 7 126 4.9E-43 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 1.5E-45 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 SUPERFAMILY SSF51230 3 126 2.09E-40 T 11-10-2018 IPR011053 Single hybrid motif Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 Gene3D G3DSA:2.40.50.100 1 127 5.4E-48 T 11-10-2018 Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 39.341 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tbd_0177 56868a2fd0a467ff9a2b76f3dc6d4219 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tbd_2399 8b560f4c3be9f5284aa49f6dd2521ddd 138 Gene3D G3DSA:3.40.250.10 36 138 3.7E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2399 8b560f4c3be9f5284aa49f6dd2521ddd 138 Pfam PF00581 Rhodanese-like domain 45 130 8.4E-18 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2399 8b560f4c3be9f5284aa49f6dd2521ddd 138 SMART SM00450 37 134 9.8E-27 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2399 8b560f4c3be9f5284aa49f6dd2521ddd 138 SUPERFAMILY SSF52821 17 137 1.7E-35 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 140 22.986 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 SUPERFAMILY SSF81330 13 135 1.12E-32 T 11-10-2018 IPR036019 Gated mechanosensitive channel Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 138 3.1E-40 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 Gene3D G3DSA:1.10.1200.120 3 141 3.0E-37 T 11-10-2018 IPR036019 Gated mechanosensitive channel Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 141 7.9E-33 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 6.5E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 6.5E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Tbd_2455 88a83a829848ff1c9c4567fb753e6646 141 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 6.5E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 SUPERFAMILY SSF118116 407 596 2.22E-58 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Gene3D G3DSA:3.30.230.10 214 324 4.1E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 SMART SM00853 411 554 2.2E-52 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Gene3D G3DSA:3.30.1370.100 454 549 1.9E-57 T 11-10-2018 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 SUPERFAMILY SSF54211 190 325 2.05E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 SUPERFAMILY SSF55874 2 200 1.96E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 4.8E-36 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 SMART SM01340 207 325 1.3E-52 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 305 1.2E-91 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 594 27.614 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Gene3D G3DSA:2.30.42.20 413 591 1.9E-57 T 11-10-2018 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 125 4.0E-13 T 11-10-2018 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Pfam PF08676 MutL C terminal dimerisation domain 407 554 2.0E-47 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tbd_1517 52b22edeee67ff7a4d25846633854c18 598 Gene3D G3DSA:3.30.565.10 1 213 5.0E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0780 71af567d2c6c3e189f442a375606f817 177 Hamap MF_00163 Peptide deformylase [def]. 2 171 25.987 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 2.9E-35 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 Gene3D G3DSA:3.90.45.10 1 177 6.3E-63 T 11-10-2018 IPR036821 Peptide deformylase superfamily Tbd_0780 71af567d2c6c3e189f442a375606f817 177 PRINTS PR01576 Peptide deformylase signature 98 109 1.6E-28 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 PRINTS PR01576 Peptide deformylase signature 110 128 1.6E-28 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 PRINTS PR01576 Peptide deformylase signature 34 63 1.6E-28 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 PRINTS PR01576 Peptide deformylase signature 129 158 1.6E-28 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 SUPERFAMILY SSF56420 2 168 3.14E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily Tbd_0780 71af567d2c6c3e189f442a375606f817 177 Pfam PF01327 Polypeptide deformylase 4 159 4.3E-48 T 11-10-2018 IPR023635 Peptide deformylase Tbd_0780 71af567d2c6c3e189f442a375606f817 177 PIRSF PIRSF004749 1 170 5.6E-49 T 11-10-2018 IPR023635 Peptide deformylase Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 SMART SM00345 7 66 6.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 Gene3D G3DSA:1.10.10.10 1 98 2.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 SUPERFAMILY SSF46785 1 69 9.47E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 Gene3D G3DSA:3.90.1150.10 99 465 7.8E-98 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 Gene3D G3DSA:3.40.640.10 142 360 7.8E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 SUPERFAMILY SSF53383 92 467 1.46E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 Pfam PF00155 Aminotransferase class I and II 148 455 6.1E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_1972 43f6a8e03e5768b2e428518c3b7d8c5d 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 4.9E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 SUPERFAMILY SSF46894 140 209 1.73E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 Gene3D G3DSA:3.40.50.12740 2 209 8.0E-62 T 11-10-2018 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 8.5E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 Pfam PF00072 Response regulator receiver domain 4 115 4.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 SMART SM00421 146 203 8.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 SUPERFAMILY SSF52172 1 132 1.07E-32 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 SMART SM00448 2 115 2.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2237 501dd210dedc3ab2562a0dd8fb62c24b 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 SMART SM00228 211 280 0.21 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 SMART SM00228 100 191 0.0045 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 Gene3D G3DSA:2.30.42.10 221 309 1.3E-18 T 11-10-2018 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 Gene3D G3DSA:2.30.42.10 130 220 2.1E-11 T 11-10-2018 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 Pfam PF02163 Peptidase family M50 14 439 2.2E-79 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 SUPERFAMILY SSF50156 194 293 3.42E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 SUPERFAMILY SSF50156 90 190 6.84E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Tbd_0792 3dbae30f296a98100fdfba481f830fb8 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 7 452 4.7E-106 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Tbd_2710 2bada09e1bc2385256339306ff4ac026 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 232 7.1E-34 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tbd_2710 2bada09e1bc2385256339306ff4ac026 247 Pfam PF02654 Cobalamin-5-phosphate synthase 7 232 1.2E-47 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tbd_2710 2bada09e1bc2385256339306ff4ac026 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 41.74 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tbd_1901 a0f248f74d9f45c91437f574bff22014 151 SUPERFAMILY SSF117396 7 75 5.36E-14 T 11-10-2018 IPR036520 UPF0759 superfamily Tbd_1901 a0f248f74d9f45c91437f574bff22014 151 Pfam PF01904 Protein of unknown function DUF72 24 74 9.0E-5 T 11-10-2018 IPR002763 Protein of unknown function DUF72 Tbd_1901 a0f248f74d9f45c91437f574bff22014 151 Gene3D G3DSA:3.20.20.410 1 80 1.3E-12 T 11-10-2018 IPR036520 UPF0759 superfamily Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 SUPERFAMILY SSF51556 5 256 3.96E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 Pfam PF01026 TatD related DNase 8 256 4.6E-79 T 11-10-2018 IPR001130 TatD family GO:0016788 Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 Gene3D G3DSA:3.20.20.140 2 260 1.6E-93 T 11-10-2018 Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 7 15 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 7 257 4.4E-85 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 PIRSF PIRSF005902 2 260 3.3E-82 T 11-10-2018 IPR001130 TatD family GO:0016788 Tbd_1540 a5778e93a0917968aa905b8681dab3cb 262 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tbd_0883 bf5036871e4bd03a38c1f29c31de4c2d 288 SUPERFAMILY SSF103481 181 280 3.01E-11 T 11-10-2018 Tbd_0883 bf5036871e4bd03a38c1f29c31de4c2d 288 Pfam PF00892 EamA-like transporter family 147 270 6.4E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_0883 bf5036871e4bd03a38c1f29c31de4c2d 288 Pfam PF00892 EamA-like transporter family 5 135 1.9E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_0883 bf5036871e4bd03a38c1f29c31de4c2d 288 SUPERFAMILY SSF103481 47 138 6.28E-11 T 11-10-2018 Tbd_1905 aa067c6af176b052131e67781392d89f 247 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 247 105.902 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Tbd_1905 aa067c6af176b052131e67781392d89f 247 Pfam PF00149 Calcineurin-like phosphoesterase 11 205 3.3E-6 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_1905 aa067c6af176b052131e67781392d89f 247 SUPERFAMILY SSF56300 9 230 5.32E-29 T 11-10-2018 Tbd_1905 aa067c6af176b052131e67781392d89f 247 Gene3D G3DSA:3.60.21.10 9 221 9.1E-12 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1905 aa067c6af176b052131e67781392d89f 247 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 11 233 3.8E-86 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 Gene3D G3DSA:1.20.120.910 6 139 8.7E-39 T 11-10-2018 Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 SUPERFAMILY SSF57716 99 137 1.43E-10 T 11-10-2018 Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 SUPERFAMILY SSF109635 4 98 3.66E-33 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 PRINTS PR00618 DksA/TraR zinc finger signature 102 113 6.3E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 PRINTS PR00618 DksA/TraR zinc finger signature 114 126 6.3E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 20 128 8.6E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 16 138 29.079 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Tbd_0691 56b3fbeafad2d1221ff65bdbf66a28ff 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 6.9E-13 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tbd_2527 e12ad0129c401535b3ca091d73e3b402 223 Gene3D G3DSA:3.30.450.40 42 222 6.1E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_2527 e12ad0129c401535b3ca091d73e3b402 223 Pfam PF04340 Protein of unknown function, DUF484 7 222 8.1E-37 T 11-10-2018 IPR007435 Protein of unknown function DUF484 Tbd_0487 08008b75c5c0d8d3a6f1b69c5062cd82 363 Gene3D G3DSA:3.30.70.270 178 351 1.2E-53 T 11-10-2018 Tbd_0487 08008b75c5c0d8d3a6f1b69c5062cd82 363 SMART SM00267 174 349 1.2E-51 T 11-10-2018 IPR000160 GGDEF domain Tbd_0487 08008b75c5c0d8d3a6f1b69c5062cd82 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 182 348 3.1E-42 T 11-10-2018 IPR000160 GGDEF domain Tbd_0487 08008b75c5c0d8d3a6f1b69c5062cd82 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 185 345 3.2E-45 T 11-10-2018 IPR000160 GGDEF domain Tbd_0487 08008b75c5c0d8d3a6f1b69c5062cd82 363 SUPERFAMILY SSF55073 190 348 3.92E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 7.8E-194 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 SUPERFAMILY SSF55347 134 355 2.21E-77 T 11-10-2018 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 8.2E-22 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 PIRSF PIRSF000148 1 371 2.0E-64 T 11-10-2018 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 Gene3D G3DSA:3.30.360.10 140 351 1.6E-80 T 11-10-2018 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 SMART SM00859 3 122 5.0E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 33.293 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 SUPERFAMILY SSF51735 1 147 2.37E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 Gene3D G3DSA:3.40.50.720 1 139 9.0E-59 T 11-10-2018 Tbd_1919 ffeb15c83e694e8ffbb4cc731370acc9 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 1.1E-55 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tbd_0072 6252289c6ed03e0e8ed08feb074829b8 166 SMART SM00344 10 122 3.8E-4 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Tbd_0072 6252289c6ed03e0e8ed08feb074829b8 166 Pfam PF13404 AsnC-type helix-turn-helix domain 10 53 2.2E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tbd_0072 6252289c6ed03e0e8ed08feb074829b8 166 Gene3D G3DSA:3.30.70.3460 38 165 2.5E-38 T 11-10-2018 Tbd_0072 6252289c6ed03e0e8ed08feb074829b8 166 SUPERFAMILY SSF46785 10 73 1.36E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2321 a4704292df1de0ccecc0d8c70fde2cf7 461 Pfam PF02321 Outer membrane efflux protein 266 450 1.1E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2321 a4704292df1de0ccecc0d8c70fde2cf7 461 Pfam PF02321 Outer membrane efflux protein 56 241 6.3E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2321 a4704292df1de0ccecc0d8c70fde2cf7 461 SUPERFAMILY SSF56954 4 453 4.32E-74 T 11-10-2018 Tbd_2321 a4704292df1de0ccecc0d8c70fde2cf7 461 PIRSF PIRSF001892 1 459 3.0E-132 T 11-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 Tbd_2321 a4704292df1de0ccecc0d8c70fde2cf7 461 Gene3D G3DSA:1.20.1600.10 33 453 2.3E-74 T 11-10-2018 Tbd_2426 e5da1936c593d3d5a4e3024b17741309 117 Gene3D G3DSA:3.40.30.10 28 113 3.2E-14 T 11-10-2018 Tbd_2426 e5da1936c593d3d5a4e3024b17741309 117 Pfam PF00578 AhpC/TSA family 51 105 4.1E-7 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_2426 e5da1936c593d3d5a4e3024b17741309 117 SUPERFAMILY SSF52833 13 103 7.13E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Gene3D G3DSA:3.30.930.10 74 277 1.6E-60 T 11-10-2018 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Pfam PF02237 Biotin protein ligase C terminal domain 280 326 3.9E-5 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Pfam PF08279 HTH domain 12 61 2.6E-9 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Gene3D G3DSA:1.10.10.10 7 66 2.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 SUPERFAMILY SSF55681 83 276 1.24E-54 T 11-10-2018 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 109 215 4.8E-13 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 SUPERFAMILY SSF46785 9 62 1.95E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 29.15 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 SUPERFAMILY SSF50037 279 326 9.61E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 325 2.2E-53 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0460 654fb84a194140a0a1c104569aa7de25 331 Gene3D G3DSA:2.30.30.100 278 330 9.7E-11 T 11-10-2018 Tbd_1413 465c5da802322b2f54ce8a591330fb0e 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1413 465c5da802322b2f54ce8a591330fb0e 233 SUPERFAMILY SSF52540 5 228 7.42E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1413 465c5da802322b2f54ce8a591330fb0e 233 SMART SM00382 34 222 3.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1413 465c5da802322b2f54ce8a591330fb0e 233 Pfam PF00005 ABC transporter 25 173 5.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1413 465c5da802322b2f54ce8a591330fb0e 233 Gene3D G3DSA:3.40.50.300 3 231 2.2E-63 T 11-10-2018 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 Pfam PF01235 Sodium:alanine symporter family 91 495 6.8E-129 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 255 274 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 345 363 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 396 418 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 227 245 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 455 475 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 PRINTS PR00175 Sodium/alanine symporter signature 126 148 1.0E-44 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_2725 7228ad53f1d36586140380af3dfc9008 502 TIGRFAM TIGR00835 agcS: amino acid carrier protein 54 486 1.3E-122 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tbd_0268 c03fb381e89ee87a28141a9334e1db1a 88 SUPERFAMILY SSF117991 3 88 2.75E-26 T 11-10-2018 IPR027471 YbeD-like domain superfamily Tbd_0268 c03fb381e89ee87a28141a9334e1db1a 88 Pfam PF04359 Protein of unknown function (DUF493) 5 88 7.7E-33 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Tbd_0268 c03fb381e89ee87a28141a9334e1db1a 88 Gene3D G3DSA:3.30.70.260 1 88 3.1E-31 T 11-10-2018 Tbd_0268 c03fb381e89ee87a28141a9334e1db1a 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 88 21.286 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Tbd_2046 c6fec7b0ceb4fecad317c88eeeff9c90 207 Gene3D G3DSA:1.10.472.60 44 170 6.1E-68 T 11-10-2018 Tbd_2046 c6fec7b0ceb4fecad317c88eeeff9c90 207 SUPERFAMILY SSF52833 6 205 2.96E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2046 c6fec7b0ceb4fecad317c88eeeff9c90 207 Gene3D G3DSA:3.40.30.10 8 198 6.1E-68 T 11-10-2018 Tbd_2046 c6fec7b0ceb4fecad317c88eeeff9c90 207 Pfam PF01323 DSBA-like thioredoxin domain 9 201 8.1E-19 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Tbd_2126 5c2d0f1f066fe680ee9aeee438f86184 262 SUPERFAMILY SSF110399 3 244 4.71E-87 T 11-10-2018 Tbd_2126 5c2d0f1f066fe680ee9aeee438f86184 262 Gene3D G3DSA:3.20.20.70 1 259 2.1E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2126 5c2d0f1f066fe680ee9aeee438f86184 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 253 6.9E-108 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Tbd_2126 5c2d0f1f066fe680ee9aeee438f86184 262 Hamap MF_00443 Thiazole synthase [thiG]. 3 259 42.593 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Tbd_0613 d162794595a223f7f00aba0857f3bc9b 222 SUPERFAMILY SSF48452 70 194 2.13E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0613 d162794595a223f7f00aba0857f3bc9b 222 Pfam PF13414 TPR repeat 82 120 1.3E-8 T 11-10-2018 Tbd_0613 d162794595a223f7f00aba0857f3bc9b 222 Gene3D G3DSA:1.25.40.10 44 208 3.5E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0613 d162794595a223f7f00aba0857f3bc9b 222 SMART SM00028 109 142 0.0037 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0613 d162794595a223f7f00aba0857f3bc9b 222 SMART SM00028 75 108 1.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1062 be5ce931ee91f115d5881ee120233840 157 Gene3D G3DSA:3.10.450.50 15 142 1.0E-20 T 11-10-2018 Tbd_1062 be5ce931ee91f115d5881ee120233840 157 SUPERFAMILY SSF54427 25 140 1.8E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_1062 be5ce931ee91f115d5881ee120233840 157 Pfam PF14534 Domain of unknown function (DUF4440) 28 136 9.7E-14 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 Tbd_1910 e8bef031008a69e62c1867b01ce6b560 214 SUPERFAMILY SSF110997 145 212 1.57E-15 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_1910 e8bef031008a69e62c1867b01ce6b560 214 Gene3D G3DSA:3.30.70.1070 138 214 1.0E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tbd_1910 e8bef031008a69e62c1867b01ce6b560 214 Pfam PF05036 Sporulation related domain 144 212 2.9E-15 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 SUPERFAMILY SSF54292 4 105 6.1E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.4E-56 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 Gene3D G3DSA:3.10.20.30 1 112 5.3E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 PRINTS PR00355 Adrenodoxin signature 42 52 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 PRINTS PR00355 Adrenodoxin signature 83 91 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 PRINTS PR00355 Adrenodoxin signature 60 74 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Tbd_1169 af6f3125e949b5bdc30cb6a2e75ee07b 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 91 3.3E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Tbd_1374 4cff5ee6af99632cbd3edc5758df96af 194 PIRSF PIRSF016919 4 194 2.5E-42 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein Tbd_1374 4cff5ee6af99632cbd3edc5758df96af 194 Pfam PF04955 HupE / UreJ protein 14 190 1.8E-49 T 11-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein Tbd_2575 01116be8cdaa9d4528476820dc8a4196 619 Pfam PF00773 RNB domain 464 504 5.6E-9 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tbd_2575 01116be8cdaa9d4528476820dc8a4196 619 Pfam PF00773 RNB domain 243 460 7.4E-35 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tbd_2575 01116be8cdaa9d4528476820dc8a4196 619 SUPERFAMILY SSF50249 230 550 2.97E-75 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2575 01116be8cdaa9d4528476820dc8a4196 619 SMART SM00955 235 506 3.8E-50 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tbd_2028 18f601d6682ba34d0e20e815b3cbdfec 620 SUPERFAMILY SSF52091 454 567 5.49E-18 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2028 18f601d6682ba34d0e20e815b3cbdfec 620 Pfam PF01740 STAS domain 457 563 4.7E-14 T 11-10-2018 IPR002645 STAS domain Tbd_2028 18f601d6682ba34d0e20e815b3cbdfec 620 Gene3D G3DSA:3.30.750.24 448 572 4.2E-22 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2028 18f601d6682ba34d0e20e815b3cbdfec 620 Pfam PF00916 Sulfate permease family 29 400 1.3E-88 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Tbd_0587 f59e9bea3aca3515478fac0de5031bf9 160 SUPERFAMILY SSF54534 4 139 5.3E-29 T 11-10-2018 Tbd_0587 f59e9bea3aca3515478fac0de5031bf9 160 Gene3D G3DSA:2.40.10.330 70 120 1.2E-48 T 11-10-2018 Tbd_0587 f59e9bea3aca3515478fac0de5031bf9 160 Gene3D G3DSA:3.10.50.40 3 153 1.2E-48 T 11-10-2018 Tbd_0587 f59e9bea3aca3515478fac0de5031bf9 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 73 1.2E-4 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 Gene3D G3DSA:2.40.170.20 154 628 9.9E-92 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 Gene3D G3DSA:2.170.130.10 28 153 4.1E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 11-10-2018 IPR010916 TonB box, conserved site Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 6.5E-28 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 Pfam PF00593 TonB dependent receptor 203 628 5.6E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_2720 8d21cb6b7448d350d21bf17ec2a6efda 631 SUPERFAMILY SSF56935 29 627 5.6E-100 T 11-10-2018 Tbd_1584 07f81775b3dbe1817ebbbd4104970ae6 216 Gene3D G3DSA:3.40.50.1820 2 211 1.2E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1584 07f81775b3dbe1817ebbbd4104970ae6 216 SUPERFAMILY SSF53474 6 212 5.8E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 SUPERFAMILY SSF52833 23 138 5.8E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 PIRSF PIRSF000077 35 139 4.6E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 Gene3D G3DSA:2.20.28.140 1 33 5.2E-14 T 11-10-2018 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 Gene3D G3DSA:3.40.30.10 38 140 9.6E-32 T 11-10-2018 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 PRINTS PR00421 Thioredoxin family signature 56 64 7.7E-8 T 11-10-2018 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 PRINTS PR00421 Thioredoxin family signature 104 115 7.7E-8 T 11-10-2018 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 PRINTS PR00421 Thioredoxin family signature 64 73 7.7E-8 T 11-10-2018 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 137 4.5E-33 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tbd_2401 f221fd962dfb0599083bccbbf4f2cd11 142 Pfam PF00085 Thioredoxin 39 138 5.2E-29 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_2402 93bede1e34344110543e1b26297244b5 152 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 4 141 7.8E-54 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 Hamap MF_00821 Protein-export protein SecB [secB]. 1 143 31.795 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 SUPERFAMILY SSF54611 3 140 4.58E-51 T 11-10-2018 IPR035958 SecB-like superfamily Tbd_2402 93bede1e34344110543e1b26297244b5 152 Pfam PF02556 Preprotein translocase subunit SecB 4 141 1.1E-54 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 95 117 2.1E-33 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 71 91 2.1E-33 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 121 139 2.1E-33 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 2.1E-33 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Tbd_2402 93bede1e34344110543e1b26297244b5 152 Gene3D G3DSA:3.10.420.10 1 152 6.2E-55 T 11-10-2018 IPR035958 SecB-like superfamily Tbd_0638 31e8e3851b36fa8d36107fd84a177d96 175 Pfam PF05751 FixH 14 154 4.6E-41 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH Tbd_1791 ef51b899ccd230f44dc6e8f8bfdbd6a6 230 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 42 221 8.4E-56 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Tbd_1791 ef51b899ccd230f44dc6e8f8bfdbd6a6 230 Pfam PF11984 Protein of unknown function (DUF3485) 10 215 3.9E-53 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Tbd_1880 531222b94074cb179267f4e2d0153867 358 Gene3D G3DSA:3.40.50.720 6 197 1.3E-52 T 11-10-2018 Tbd_1880 531222b94074cb179267f4e2d0153867 358 Gene3D G3DSA:3.90.25.10 198 358 7.1E-68 T 11-10-2018 Tbd_1880 531222b94074cb179267f4e2d0153867 358 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 10 357 6.8E-156 T 11-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 Tbd_1880 531222b94074cb179267f4e2d0153867 358 SUPERFAMILY SSF51735 10 344 3.74E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1880 531222b94074cb179267f4e2d0153867 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 17 252 7.7E-30 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_0161 18af030da9267c8bfcce1909b512f653 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 SUPERFAMILY SSF53748 3 389 3.06E-141 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 Gene3D G3DSA:3.40.50.1260 8 387 1.8E-145 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 342 353 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.6E-77 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 Pfam PF00162 Phosphoglycerate kinase 6 379 4.8E-137 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 389 37.741 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 PIRSF PIRSF000724 1 393 5.0E-134 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0161 18af030da9267c8bfcce1909b512f653 393 Gene3D G3DSA:3.40.50.1260 166 379 1.8E-145 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 SUPERFAMILY SSF53850 38 261 9.72E-31 T 11-10-2018 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Gene3D G3DSA:3.40.190.10 123 218 1.1E-42 T 11-10-2018 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 SMART SM00062 37 262 3.3E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Gene3D G3DSA:1.10.530.10 282 454 9.1E-29 T 11-10-2018 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 469 41.058 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 SUPERFAMILY SSF53955 243 414 5.63E-31 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Pfam PF01464 Transglycosylase SLT domain 288 396 7.6E-18 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 261 8.4E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tbd_1230 b7b3c2c7834da9f00dd2cf5d9e5dc00b 470 Gene3D G3DSA:3.40.190.10 34 256 1.1E-42 T 11-10-2018 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 7.7E-52 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 Gene3D G3DSA:1.10.520.20 2 107 3.5E-33 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 SUPERFAMILY SSF47928 3 106 2.09E-23 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.441 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 174 4.5E-43 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.1E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.1E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.1E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2800 2635b61e47e60870dff0e16a29fa4ba4 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.1E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 SUPERFAMILY SSF50249 1 66 1.84E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 Gene3D G3DSA:2.40.50.140 1 65 5.6E-31 T 11-10-2018 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 PIRSF PIRSF002599 1 68 4.4E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 PRINTS PR00050 Cold shock protein signature 40 58 2.1E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site Tbd_0855 1dbc306677b81350302f4114e2d04ae6 68 SMART SM00357 3 67 1.5E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Tbd_2029 eec5d8b10f6177a6b688bbafe2b7e717 161 Pfam PF00565 Staphylococcal nuclease homologue 50 142 7.1E-17 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tbd_2029 eec5d8b10f6177a6b688bbafe2b7e717 161 Gene3D G3DSA:2.40.50.90 14 147 4.4E-24 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily Tbd_2029 eec5d8b10f6177a6b688bbafe2b7e717 161 SMART SM00318 19 142 7.3E-16 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Tbd_2029 eec5d8b10f6177a6b688bbafe2b7e717 161 SUPERFAMILY SSF50199 15 149 6.93E-29 T 11-10-2018 Tbd_1877 ccf81f1fb08a8935ec57afa3209d4756 242 Gene3D G3DSA:3.40.50.300 36 242 2.5E-36 T 11-10-2018 Tbd_1877 ccf81f1fb08a8935ec57afa3209d4756 242 SUPERFAMILY SSF52540 48 233 1.78E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1877 ccf81f1fb08a8935ec57afa3209d4756 242 SMART SM00382 58 230 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1877 ccf81f1fb08a8935ec57afa3209d4756 242 Pfam PF00005 ABC transporter 49 181 1.5E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0240 dfcd4cc241603518477192367506ab71 112 Gene3D G3DSA:3.30.70.120 1 112 2.8E-45 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tbd_0240 dfcd4cc241603518477192367506ab71 112 PIRSF PIRSF039144 1 112 9.2E-54 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 SMART SM00938 4 105 1.7E-66 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 SUPERFAMILY SSF54913 1 112 2.45E-44 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_0240 dfcd4cc241603518477192367506ab71 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Tbd_0240 dfcd4cc241603518477192367506ab71 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Tbd_2696 5feb6ab3d1f7eb57d75a2f309a3aa03f 105 SMART SM00450 5 100 1.2E-24 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2696 5feb6ab3d1f7eb57d75a2f309a3aa03f 105 Pfam PF00581 Rhodanese-like domain 6 96 7.8E-15 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_2696 5feb6ab3d1f7eb57d75a2f309a3aa03f 105 Gene3D G3DSA:3.40.250.10 5 104 2.9E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_2696 5feb6ab3d1f7eb57d75a2f309a3aa03f 105 SUPERFAMILY SSF52821 3 101 8.91E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1109 ea4eb2706ad2ca5c74a367ce1090f45c 402 PIRSF PIRSF003085 3 398 8.0E-125 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Tbd_1109 ea4eb2706ad2ca5c74a367ce1090f45c 402 Pfam PF02353 Mycolic acid cyclopropane synthetase 105 378 3.2E-95 T 11-10-2018 Tbd_1109 ea4eb2706ad2ca5c74a367ce1090f45c 402 SUPERFAMILY SSF53335 114 382 6.23E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1109 ea4eb2706ad2ca5c74a367ce1090f45c 402 Gene3D G3DSA:3.40.50.150 113 386 5.7E-95 T 11-10-2018 Tbd_1429 afdc9a77368189305871049ebf885f4f 77 Gene3D G3DSA:3.40.30.10 1 77 3.6E-27 T 11-10-2018 Tbd_1429 afdc9a77368189305871049ebf885f4f 77 PIRSF PIRSF037031 1 77 2.1E-29 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 Tbd_1429 afdc9a77368189305871049ebf885f4f 77 SUPERFAMILY SSF52833 2 76 8.02E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1429 afdc9a77368189305871049ebf885f4f 77 Pfam PF13192 Thioredoxin domain 3 76 5.3E-26 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_0137 5a3e8bd6a5684ea7fe38048c8b35cfef 177 Pfam PF09626 Dihaem cytochrome c 48 168 6.5E-44 T 11-10-2018 IPR018588 Dihaem cytochrome c Tbd_2121 5b4970d4672774ebb40fa3894ec5409c 228 Gene3D G3DSA:3.40.50.1360 2 228 3.1E-67 T 11-10-2018 Tbd_2121 5b4970d4672774ebb40fa3894ec5409c 228 SUPERFAMILY SSF100950 5 227 1.5E-58 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Tbd_2121 5b4970d4672774ebb40fa3894ec5409c 228 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 226 1.4E-52 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Tbd_2121 5b4970d4672774ebb40fa3894ec5409c 228 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 221 4.2E-63 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Gene3D G3DSA:3.30.1490.20 135 199 8.0E-105 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 118 2.6E-40 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 145.074 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Gene3D G3DSA:3.40.50.20 6 112 8.0E-105 T 11-10-2018 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 SUPERFAMILY SSF52440 1 120 1.06E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 122 295 1.4E-70 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 8.1E-122 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 Gene3D G3DSA:3.30.470.20 113 293 8.0E-105 T 11-10-2018 Tbd_2409 7e570b751b3f0559bb6c415e915772c5 314 SUPERFAMILY SSF56059 121 309 2.4E-53 T 11-10-2018 Tbd_1983 60eaac8892c57835079c873ae1dbf66e 138 Gene3D G3DSA:3.40.1260.10 1 137 4.5E-18 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1983 60eaac8892c57835079c873ae1dbf66e 138 SUPERFAMILY SSF75169 1 123 1.35E-12 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1983 60eaac8892c57835079c873ae1dbf66e 138 Pfam PF02635 DsrE/DsrF-like family 3 122 4.1E-7 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 SUPERFAMILY SSF46689 316 414 1.57E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 SUPERFAMILY SSF52540 138 347 3.99E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Gene3D G3DSA:1.10.8.60 274 352 6.9E-14 T 11-10-2018 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Gene3D G3DSA:3.40.50.300 132 273 3.9E-29 T 11-10-2018 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Pfam PF02954 Bacterial regulatory protein, Fis family 372 412 2.5E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Pfam PF00072 Response regulator receiver domain 5 115 2.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Pfam PF14532 Sigma-54 interaction domain 137 274 2.3E-45 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Gene3D G3DSA:3.40.50.2300 2 131 8.5E-36 T 11-10-2018 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 SMART SM00448 3 115 1.8E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 SUPERFAMILY SSF52172 4 179 3.56E-39 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0019 282bccced7632bce0dd7a70fae875f20 424 Gene3D G3DSA:1.10.10.60 365 416 2.0E-13 T 11-10-2018 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 336 38.188 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 8.6E-98 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 SUPERFAMILY SSF52418 76 338 4.32E-100 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 Gene3D G3DSA:3.40.1030.10 72 342 1.8E-111 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 335 3.7E-130 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 4.3E-14 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 SUPERFAMILY SSF47648 3 70 9.16E-17 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_2223 bba3f2871fcf16c8575e20bc625eeb58 343 Gene3D G3DSA:1.20.970.10 1 71 1.1E-31 T 11-10-2018 Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 Gene3D G3DSA:3.20.20.450 466 717 7.1E-102 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 288 451 1.7E-45 T 11-10-2018 IPR000160 GGDEF domain Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 448 1.8E-49 T 11-10-2018 IPR000160 GGDEF domain Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 Pfam PF00563 EAL domain 469 703 2.0E-71 T 11-10-2018 IPR001633 EAL domain Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 SUPERFAMILY SSF141868 467 715 1.31E-89 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 SMART SM00267 280 452 8.6E-63 T 11-10-2018 IPR000160 GGDEF domain Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 Gene3D G3DSA:3.30.70.270 285 465 7.8E-61 T 11-10-2018 Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 SMART SM00052 462 708 2.0E-122 T 11-10-2018 IPR001633 EAL domain Tbd_1006 cf46f6cb92f1749a867584943ad6874c 730 SUPERFAMILY SSF55073 296 454 1.18E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 SUPERFAMILY SSF51690 111 276 1.73E-54 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 Gene3D G3DSA:3.90.1170.20 9 276 5.4E-107 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 PIRSF PIRSF006250 3 280 4.5E-92 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 5.7E-54 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 Gene3D G3DSA:3.20.20.70 120 267 5.4E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 276 1.2E-91 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 SUPERFAMILY SSF54675 4 110 5.49E-31 T 11-10-2018 Tbd_0814 67bbfb8c02456aab8e7b23c2070b8328 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 21 109 4.5E-25 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 PIRSF PIRSF001461 1 227 1.4E-99 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 205 2.1E-92 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 4.2E-91 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 Gene3D G3DSA:3.20.20.70 1 217 3.2E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2230 86f8647abc8d756f53496a6bd90a4a63 227 SUPERFAMILY SSF51366 3 206 2.77E-72 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_1894 840640132b3f8e2b5d0c84a3473da0fc 302 Gene3D G3DSA:3.40.50.300 1 237 3.2E-66 T 11-10-2018 Tbd_1894 840640132b3f8e2b5d0c84a3473da0fc 302 SUPERFAMILY SSF52540 6 233 1.9E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1894 840640132b3f8e2b5d0c84a3473da0fc 302 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1894 840640132b3f8e2b5d0c84a3473da0fc 302 SMART SM00382 32 212 3.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1894 840640132b3f8e2b5d0c84a3473da0fc 302 Pfam PF00005 ABC transporter 23 165 1.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1706 0cbfc8eed3d90cad7e65a925e66fbb21 108 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 91 1.1E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Tbd_1706 0cbfc8eed3d90cad7e65a925e66fbb21 108 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 6.7E-35 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tbd_1706 0cbfc8eed3d90cad7e65a925e66fbb21 108 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.962 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tbd_1706 0cbfc8eed3d90cad7e65a925e66fbb21 108 Gene3D G3DSA:1.10.287.1080 1 94 9.1E-34 T 11-10-2018 Tbd_1706 0cbfc8eed3d90cad7e65a925e66fbb21 108 SUPERFAMILY SSF101386 3 92 7.85E-28 T 11-10-2018 Tbd_2127 3dc6989c1521881e403095868d9c8653 67 Pfam PF02597 ThiS family 6 67 8.2E-16 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tbd_2127 3dc6989c1521881e403095868d9c8653 67 SUPERFAMILY SSF54285 4 66 1.19E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tbd_2127 3dc6989c1521881e403095868d9c8653 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 67 2.8E-22 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis Tbd_2127 3dc6989c1521881e403095868d9c8653 67 Gene3D G3DSA:3.10.20.30 2 67 3.5E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_2603 87c7e5e85f7aa42f8908356df80ef550 291 Gene3D G3DSA:3.30.2010.10 70 163 8.3E-32 T 11-10-2018 Tbd_2603 87c7e5e85f7aa42f8908356df80ef550 291 Hamap MF_00188 Protease HtpX [htpX]. 1 290 24.369 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Tbd_2603 87c7e5e85f7aa42f8908356df80ef550 291 Pfam PF01435 Peptidase family M48 80 289 1.0E-36 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 4.9E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 Gene3D G3DSA:3.30.700.10 14 121 1.0E-14 T 11-10-2018 Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 1.3E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 1.3E-7 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 33 8.9E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1302 bd3919d6b5d65c66fd40d869629fe000 124 SUPERFAMILY SSF54523 14 111 1.46E-21 T 11-10-2018 Tbd_2524 ba479d1daad795b7fd19d10a30cd47dd 167 Pfam PF00583 Acetyltransferase (GNAT) family 52 142 1.8E-18 T 11-10-2018 IPR000182 GNAT domain Tbd_2524 ba479d1daad795b7fd19d10a30cd47dd 167 SUPERFAMILY SSF55729 6 167 1.48E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_2524 ba479d1daad795b7fd19d10a30cd47dd 167 Gene3D G3DSA:3.40.630.30 7 167 5.4E-41 T 11-10-2018 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 9 1316 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SMART SM01211 1066 1317 1.0E-143 T 11-10-2018 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF52317 1063 1317 2.71E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF56042 432 655 7.63E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1066 1315 2.1E-98 T 11-10-2018 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:3.90.650.10 421 607 5.0E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:1.10.8.750 158 218 1.7E-27 T 11-10-2018 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Pfam PF02769 AIR synthase related protein, C-terminal domain 434 587 2.2E-28 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Pfam PF02769 AIR synthase related protein, C-terminal domain 834 992 1.5E-12 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF56042 827 1059 2.84E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF55326 226 428 2.3E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:3.90.650.10 812 1007 5.3E-28 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:3.30.1330.10 219 420 8.0E-42 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:3.30.1330.10 617 809 1.4E-23 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1318 20.712 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 Gene3D G3DSA:3.40.50.880 1008 1318 2.9E-127 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF109736 159 225 7.85E-22 T 11-10-2018 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF82697 5 157 1.62E-37 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tbd_0629 5597726a7536f9026152755bcbc29ac6 1318 SUPERFAMILY SSF55326 621 816 1.33E-61 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Gene3D G3DSA:3.30.470.20 1 234 5.3E-87 T 11-10-2018 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Pfam PF08442 ATP-grasp domain 2 203 7.4E-72 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Gene3D G3DSA:3.40.50.261 240 386 3.0E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 PIRSF PIRSF001554 1 386 9.4E-144 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.0E-152 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Pfam PF00549 CoA-ligase 262 380 1.4E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 SUPERFAMILY SSF52210 241 383 5.89E-50 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Gene3D G3DSA:3.30.1490.20 21 104 5.3E-87 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 SUPERFAMILY SSF56059 1 236 5.5E-75 T 11-10-2018 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Tbd_0805 27b2d7a1cf2b46fb1d49d97ef987daec 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.121 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Tbd_0467 18587c0de14ce2d003ebeaa779651ed0 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 153 8.6E-14 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tbd_1614 5ae194e2fb91b2e0f668f96a80bebfec 131 Pfam PF00072 Response regulator receiver domain 9 120 1.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1614 5ae194e2fb91b2e0f668f96a80bebfec 131 SMART SM00448 6 120 5.1E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1614 5ae194e2fb91b2e0f668f96a80bebfec 131 SUPERFAMILY SSF52172 5 125 2.99E-35 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1614 5ae194e2fb91b2e0f668f96a80bebfec 131 Gene3D G3DSA:3.40.50.12740 5 130 3.4E-37 T 11-10-2018 Tbd_2208 0ef1af1cafc1fec15462ae1f8804340b 136 TIGRFAM TIGR02801 tolR: protein TolR 8 132 3.0E-39 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Tbd_2208 0ef1af1cafc1fec15462ae1f8804340b 136 Gene3D G3DSA:3.30.420.270 52 126 4.3E-12 T 11-10-2018 Tbd_2208 0ef1af1cafc1fec15462ae1f8804340b 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 133 1.6E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tbd_1616 3728d5efe52658a433c478387d3d0139 202 SUPERFAMILY SSF64438 24 177 4.67E-53 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tbd_1616 3728d5efe52658a433c478387d3d0139 202 Pfam PF03975 CheD chemotactic sensory transduction 66 170 3.6E-35 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tbd_1616 3728d5efe52658a433c478387d3d0139 202 Gene3D G3DSA:3.30.1330.200 22 181 1.5E-54 T 11-10-2018 IPR038592 CheD-like superfamily Tbd_1616 3728d5efe52658a433c478387d3d0139 202 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 174 29.856 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 Gene3D G3DSA:1.25.40.10 22 163 9.0E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR01032 Gene IV protein signature 185 206 3.8E-10 T 11-10-2018 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR01032 Gene IV protein signature 551 573 3.8E-10 T 11-10-2018 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR01032 Gene IV protein signature 428 451 3.8E-10 T 11-10-2018 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR01032 Gene IV protein signature 498 526 3.8E-10 T 11-10-2018 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 SUPERFAMILY SSF48452 28 158 1.12E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 Gene3D G3DSA:3.55.50.30 164 272 8.2E-17 T 11-10-2018 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 SMART SM00965 205 256 9.0E-5 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 Pfam PF00263 Bacterial type II and III secretion system protein 409 571 4.3E-44 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 403 427 5.5E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 438 448 5.5E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 535 553 5.5E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 329 339 5.5E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1439 7af9a2d0e7a92bee4395a2430d257a17 656 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 572 5.5E-14 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 Gene3D G3DSA:1.40.20.10 236 523 2.9E-61 T 11-10-2018 IPR038186 CHAD domain superfamily Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 Pfam PF05235 CHAD domain 259 498 6.8E-46 T 11-10-2018 IPR007899 CHAD domain Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 SMART SM01118 18 232 3.4E-38 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 SUPERFAMILY SSF55154 19 231 1.18E-40 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 Pfam PF01928 CYTH domain 20 225 7.1E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 SMART SM00880 257 533 1.0E-64 T 11-10-2018 IPR007899 CHAD domain Tbd_1086 ecc148ec82de6cca0bb5bc5f47be13f2 540 Gene3D G3DSA:2.40.320.10 15 228 6.5E-29 T 11-10-2018 Tbd_1651 696143c698e9dd529839c5d1fc3f63b2 183 Gene3D G3DSA:3.60.21.10 1 168 4.5E-32 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1651 696143c698e9dd529839c5d1fc3f63b2 183 SUPERFAMILY SSF56300 1 167 1.96E-28 T 11-10-2018 Tbd_1651 696143c698e9dd529839c5d1fc3f63b2 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 156 1.9E-18 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Tbd_1651 696143c698e9dd529839c5d1fc3f63b2 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 157 4.1E-33 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tbd_1392 55d4be33096afb1b2079c5dd8ac94af3 318 SUPERFAMILY SSF52540 14 244 4.32E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1392 55d4be33096afb1b2079c5dd8ac94af3 318 SMART SM00382 45 225 3.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1392 55d4be33096afb1b2079c5dd8ac94af3 318 Pfam PF00005 ABC transporter 37 176 7.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1392 55d4be33096afb1b2079c5dd8ac94af3 318 Gene3D G3DSA:3.40.50.300 9 242 1.2E-66 T 11-10-2018 Tbd_1392 55d4be33096afb1b2079c5dd8ac94af3 318 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.2090.10 726 821 2.2E-299 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82693 155 333 1.74E-18 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82693 579 667 8.37E-7 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82714 725 814 1.57E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:1.20.1640.10 515 1034 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.70.1430 42 829 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:1.20.1640.10 15 514 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.70.1320 136 333 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.70.1440 675 879 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82693 42 127 1.73E-21 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82714 194 275 1.28E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82866 300 506 1.57E-33 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 SUPERFAMILY SSF82866 818 1041 1.96E-55 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.70.1430 570 674 2.2E-299 T 11-10-2018 Tbd_1327 9124e94c4f605320e81a6f1f37d89406 1059 Gene3D G3DSA:3.30.2090.10 189 280 2.2E-299 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 SUPERFAMILY SSF55120 95 261 9.11E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 SUPERFAMILY SSF55174 34 124 1.91E-16 T 11-10-2018 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 101 261 5.2E-48 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 Gene3D G3DSA:3.30.70.580 99 256 1.1E-45 T 11-10-2018 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 SMART SM00363 34 95 1.7E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 Gene3D G3DSA:3.30.70.1560 159 249 1.1E-45 T 11-10-2018 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 Pfam PF00849 RNA pseudouridylate synthase 97 230 3.5E-14 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 Pfam PF01479 S4 domain 34 79 6.4E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1258 4680c8aebe44c5fb374bb3c9778644e5 296 Gene3D G3DSA:3.10.290.10 28 89 6.2E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 SUPERFAMILY SSF53335 7 207 5.68E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 203 28.419 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 Gene3D G3DSA:3.40.50.150 2 208 1.7E-70 T 11-10-2018 Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 205 2.3E-57 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 Pfam PF02527 rRNA small subunit methyltransferase G 23 201 8.5E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tbd_2807 1ae0dec7629636f02cfe403417c6564c 208 PIRSF PIRSF003078 3 208 1.4E-56 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 SUPERFAMILY SSF52540 17 226 6.02E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 9 360 2.8E-134 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 Pfam PF03459 TOBE domain 298 360 2.6E-17 T 11-10-2018 IPR005116 Transport-associated OB, type 1 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 SUPERFAMILY SSF50331 243 360 1.08E-20 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 Gene3D G3DSA:3.40.50.300 21 233 8.4E-59 T 11-10-2018 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 Pfam PF00005 ABC transporter 23 165 3.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 Gene3D G3DSA:2.40.50.100 297 361 5.8E-15 T 11-10-2018 Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 SMART SM00382 30 215 1.0E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1285 4cc8d2e3a62d1bdce98e2c42e95ba7db 362 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0706 55b3c08c2048c7f935f19067e0e00ae2 407 Gene3D G3DSA:2.40.160.10 202 407 3.0E-12 T 11-10-2018 IPR023614 Porin domain superfamily Tbd_0706 55b3c08c2048c7f935f19067e0e00ae2 407 Pfam PF07396 Phosphate-selective porin O and P 94 397 3.8E-11 T 11-10-2018 IPR010870 Phosphate-selective porin O/P Tbd_0706 55b3c08c2048c7f935f19067e0e00ae2 407 SUPERFAMILY SSF56935 84 407 2.81E-42 T 11-10-2018 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 Pfam PF01872 RibD C-terminal domain 151 352 1.1E-46 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 103 7.9E-21 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 SUPERFAMILY SSF53927 7 148 9.03E-49 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 Gene3D G3DSA:3.40.430.10 140 358 6.0E-70 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 356 5.1E-53 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 354 1.9E-114 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 PIRSF PIRSF006769 3 359 5.9E-128 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 SUPERFAMILY SSF53597 149 355 1.28E-60 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tbd_2168 545b00c75e178a21b5df42451985a1a3 359 Gene3D G3DSA:3.40.140.10 2 139 6.4E-46 T 11-10-2018 Tbd_1835 5ec4409d3e57191d632a31e87d2e8872 242 SUPERFAMILY SSF75169 125 241 1.0E-13 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1835 5ec4409d3e57191d632a31e87d2e8872 242 Gene3D G3DSA:3.40.1260.10 123 241 4.9E-18 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 SMART SM00052 218 452 3.8E-41 T 11-10-2018 IPR001633 EAL domain Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 SUPERFAMILY SSF141868 225 451 5.23E-60 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 Pfam PF00563 EAL domain 224 447 1.1E-52 T 11-10-2018 IPR001633 EAL domain Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 Gene3D G3DSA:3.30.450.40 64 218 8.0E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 SUPERFAMILY SSF55781 72 214 1.04E-19 T 11-10-2018 Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 Pfam PF13185 GAF domain 70 210 1.2E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 Gene3D G3DSA:3.20.20.450 219 451 8.0E-59 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1061 810c8b17b20b1efb815ec53fd857096f 454 SMART SM00065 70 219 1.5E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 Tbd_1002 79408ac8c20d961011c588442c330290 757 Pfam PF01580 FtsK/SpoIIIE family 378 588 3.0E-67 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Tbd_1002 79408ac8c20d961011c588442c330290 757 SMART SM00843 690 755 1.6E-36 T 11-10-2018 IPR018541 FtsK gamma domain Tbd_1002 79408ac8c20d961011c588442c330290 757 Gene3D G3DSA:3.30.980.40 271 375 1.3E-32 T 11-10-2018 Tbd_1002 79408ac8c20d961011c588442c330290 757 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 17 192 8.9E-45 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region Tbd_1002 79408ac8c20d961011c588442c330290 757 SUPERFAMILY SSF46785 691 754 5.45E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1002 79408ac8c20d961011c588442c330290 757 SUPERFAMILY SSF52540 355 660 4.38E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1002 79408ac8c20d961011c588442c330290 757 Gene3D G3DSA:1.10.10.10 687 751 2.9E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1002 79408ac8c20d961011c588442c330290 757 Gene3D G3DSA:3.40.50.300 376 674 2.9E-117 T 11-10-2018 Tbd_1002 79408ac8c20d961011c588442c330290 757 Pfam PF09397 Ftsk gamma domain 692 752 6.3E-26 T 11-10-2018 IPR018541 FtsK gamma domain Tbd_0359 cd866ac9a1de40e91fbde98bbf124157 222 Gene3D G3DSA:3.30.1150.10 74 221 6.6E-5 T 11-10-2018 Tbd_0359 cd866ac9a1de40e91fbde98bbf124157 222 Pfam PF13103 TonB C terminal 132 216 8.6E-6 T 11-10-2018 Tbd_0359 cd866ac9a1de40e91fbde98bbf124157 222 SUPERFAMILY SSF74653 54 219 1.44E-6 T 11-10-2018 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 Pfam PF01196 Ribosomal protein L17 20 116 3.3E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 Gene3D G3DSA:3.90.1030.10 1 116 1.8E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.5E-43 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 SUPERFAMILY SSF64263 1 119 1.05E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0431 058cd8df8e1aced62d3b4541a78242ec 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.985 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.713 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 Pfam PF03023 MviN-like protein 28 476 6.7E-145 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.0E-81 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 PIRSF PIRSF002869 1 512 2.1E-171 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_1855 72afb2d1d57fd7c6275bd7009d8e2e08 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 7.4E-155 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tbd_0522 94bdb490fdaa22b98e0059138ba8aecc 267 Gene3D G3DSA:3.40.50.720 2 247 4.7E-77 T 11-10-2018 Tbd_0522 94bdb490fdaa22b98e0059138ba8aecc 267 SUPERFAMILY SSF69572 3 235 4.05E-56 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tbd_0522 94bdb490fdaa22b98e0059138ba8aecc 267 Pfam PF00899 ThiF family 8 169 2.6E-37 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 561 1.2E-199 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 8.1E-31 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 256 271 8.1E-31 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 52 64 8.1E-31 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 328 344 8.1E-31 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 406 425 8.1E-31 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 699 23.676 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 Pfam PF05746 DALR anticodon binding domain 593 692 3.7E-8 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 699 4.0E-192 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2347 cb56dd82050940e4ce792e5b9687ebfa 701 SUPERFAMILY SSF109604 359 502 9.42E-18 T 11-10-2018 Tbd_2809 8e50e4781a7af5a0cd2e182390261f9f 218 SUPERFAMILY SSF69336 20 77 2.88E-6 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Tbd_2809 8e50e4781a7af5a0cd2e182390261f9f 218 Pfam PF07589 PEP-CTERM motif 188 212 1.4E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2809 8e50e4781a7af5a0cd2e182390261f9f 218 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 189 213 5.8E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2738 1606116ddf72359fe4f08f97bd0e6d4b 243 SUPERFAMILY SSF56281 1 233 1.76E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_2738 1606116ddf72359fe4f08f97bd0e6d4b 243 Pfam PF00753 Metallo-beta-lactamase superfamily 28 183 9.2E-8 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_2738 1606116ddf72359fe4f08f97bd0e6d4b 243 Gene3D G3DSA:3.60.15.10 2 242 6.9E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_2738 1606116ddf72359fe4f08f97bd0e6d4b 243 SMART SM00849 11 183 3.8E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_2007 5ec0c0d7fdfd9c3dc63d637a4b279a98 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_2007 5ec0c0d7fdfd9c3dc63d637a4b279a98 197 PIRSF PIRSF000847 3 186 2.7E-37 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tbd_2007 5ec0c0d7fdfd9c3dc63d637a4b279a98 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 71 3.5E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tbd_2007 5ec0c0d7fdfd9c3dc63d637a4b279a98 197 Gene3D G3DSA:1.20.120.1760 3 174 9.8E-11 T 11-10-2018 Tbd_1351 8e13aeef88b0867b2f95c01c1f5bdbbc 146 Pfam PF12375 Phage protein 74 133 1.1E-17 T 11-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 Tbd_1351 8e13aeef88b0867b2f95c01c1f5bdbbc 146 Pfam PF01381 Helix-turn-helix 29 61 1.8E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tbd_1351 8e13aeef88b0867b2f95c01c1f5bdbbc 146 Gene3D G3DSA:1.10.260.40 27 79 6.1E-12 T 11-10-2018 Tbd_1351 8e13aeef88b0867b2f95c01c1f5bdbbc 146 SUPERFAMILY SSF47413 23 67 6.43E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tbd_1202 d74264769479fc99652352196d796d10 252 Pfam PF00775 Dioxygenase 53 158 1.3E-11 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 Tbd_1202 d74264769479fc99652352196d796d10 252 Gene3D G3DSA:2.60.130.10 11 241 6.0E-44 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Tbd_1202 d74264769479fc99652352196d796d10 252 SUPERFAMILY SSF49482 10 217 3.79E-47 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 Tbd_2104 3853d2aee28ae0bf146323fd28c80555 96 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 1.7E-28 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 Tbd_2104 3853d2aee28ae0bf146323fd28c80555 96 Gene3D G3DSA:2.40.50.140 1 96 6.3E-27 T 11-10-2018 Tbd_2104 3853d2aee28ae0bf146323fd28c80555 96 SUPERFAMILY SSF50249 1 94 5.57E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_2104 3853d2aee28ae0bf146323fd28c80555 96 PIRSF PIRSF003135 1 95 2.5E-13 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 Tbd_2104 3853d2aee28ae0bf146323fd28c80555 96 Hamap MF_00720 Primosomal replication protein N [priB]. 1 96 21.236 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 Tbd_0754 9d538e427c2b96db666ee36d7f13007a 195 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.9E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0754 9d538e427c2b96db666ee36d7f13007a 195 Gene3D G3DSA:3.30.700.10 14 123 2.0E-15 T 11-10-2018 Tbd_0754 9d538e427c2b96db666ee36d7f13007a 195 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 9.6E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0754 9d538e427c2b96db666ee36d7f13007a 195 SUPERFAMILY SSF54523 14 108 5.1E-14 T 11-10-2018 Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 Gene3D G3DSA:3.30.1310.10 1 108 6.1E-45 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 5.3E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 SUPERFAMILY SSF82607 10 102 2.88E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 PIRSF PIRSF004555 3 108 1.5E-37 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.298 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tbd_0516 f469f56854c8ee4d155f7f479f750232 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 6.5E-34 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tbd_2234 ddd3a92b380295dd005a448bd0f14806 44 Pfam PF08085 Entericidin EcnA/B family 20 40 2.3E-11 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 Tbd_1394 5493e30920682521f37a3bff8c002313 173 Gene3D G3DSA:3.30.70.2050 115 172 1.5E-10 T 11-10-2018 Tbd_1394 5493e30920682521f37a3bff8c002313 173 SUPERFAMILY SSF160387 55 171 3.14E-38 T 11-10-2018 Tbd_1394 5493e30920682521f37a3bff8c002313 173 Pfam PF05573 NosL 17 161 6.6E-56 T 11-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL Tbd_1394 5493e30920682521f37a3bff8c002313 173 Gene3D G3DSA:3.30.70.2060 55 114 2.1E-17 T 11-10-2018 Tbd_2148 966854f102168aa1ca107926e4a93e11 446 Gene3D G3DSA:3.30.2290.10 3 232 4.5E-87 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tbd_2148 966854f102168aa1ca107926e4a93e11 446 Pfam PF01523 Putative modulator of DNA gyrase 33 323 8.4E-57 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tbd_2148 966854f102168aa1ca107926e4a93e11 446 SUPERFAMILY SSF111283 13 446 5.1E-129 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 PRINTS PR00606 Class ID cytochrome C signature 82 92 3.6E-23 T 11-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 PRINTS PR00606 Class ID cytochrome C signature 67 80 3.6E-23 T 11-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 PRINTS PR00606 Class ID cytochrome C signature 29 42 3.6E-23 T 11-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 PRINTS PR00606 Class ID cytochrome C signature 94 104 3.6E-23 T 11-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 PRINTS PR00606 Class ID cytochrome C signature 44 57 3.6E-23 T 11-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 Gene3D G3DSA:1.10.760.10 26 106 6.2E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 SUPERFAMILY SSF46626 28 105 1.75E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2726 be4cd0fddcc87d6a33e389d71ce554ae 106 Pfam PF00034 Cytochrome c 29 106 1.7E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1899 cb93a32110e06276dbc5e1a5c9bb04cf 262 Pfam PF02405 Permease MlaE 45 255 2.9E-77 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Tbd_1899 cb93a32110e06276dbc5e1a5c9bb04cf 262 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 260 4.2E-91 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Tbd_1058 2cd11eaadcd91a436e9968e8f82a9be6 296 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 40 284 2.3E-13 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Tbd_1058 2cd11eaadcd91a436e9968e8f82a9be6 296 Gene3D G3DSA:3.60.130.10 41 291 5.1E-21 T 11-10-2018 Tbd_1058 2cd11eaadcd91a436e9968e8f82a9be6 296 SUPERFAMILY SSF51197 12 288 1.34E-26 T 11-10-2018 Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 83 6.1E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 Gene3D G3DSA:1.10.150.130 4 92 7.7E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 290 58.425 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 Gene3D G3DSA:1.10.443.10 105 284 9.7E-58 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 Pfam PF00589 Phage integrase family 107 275 7.1E-44 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 292 8.6E-108 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 Tbd_2528 41ae28914f3b3fe16948cef0d1f2837b 294 SUPERFAMILY SSF56349 7 284 8.83E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 ProSitePatterns PS00194 Thioredoxin family active site. 27 45 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Pfam PF14559 Tetratricopeptide repeat 125 189 1.9E-10 T 11-10-2018 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Pfam PF00085 Thioredoxin 12 107 2.9E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Gene3D G3DSA:1.25.40.10 195 279 5.9E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Pfam PF14561 Tetratricopeptide repeat 196 279 1.0E-24 T 11-10-2018 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 SUPERFAMILY SSF52833 5 114 4.41E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 SUPERFAMILY SSF48452 111 245 3.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Gene3D G3DSA:1.25.40.10 112 194 3.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 Gene3D G3DSA:3.40.30.10 2 111 2.1E-32 T 11-10-2018 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 PRINTS PR00421 Thioredoxin family signature 34 43 3.5E-6 T 11-10-2018 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 PRINTS PR00421 Thioredoxin family signature 26 34 3.5E-6 T 11-10-2018 Tbd_0519 f8a0f8f303eb8f138a5e6470e8b439aa 280 PRINTS PR00421 Thioredoxin family signature 74 85 3.5E-6 T 11-10-2018 Tbd_0999 42d5ab04fb88e33811be4833042a4fca 151 PIRSF PIRSF000239 4 151 6.1E-23 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0999 42d5ab04fb88e33811be4833042a4fca 151 SUPERFAMILY SSF52833 7 151 1.47E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0999 42d5ab04fb88e33811be4833042a4fca 151 Pfam PF00578 AhpC/TSA family 6 129 5.2E-31 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0999 42d5ab04fb88e33811be4833042a4fca 151 Gene3D G3DSA:3.40.30.10 2 150 1.0E-43 T 11-10-2018 Tbd_2233 4be9704f32c9d41cf7cd898da091f9a2 192 SUPERFAMILY SSF47240 52 191 2.22E-37 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_2233 4be9704f32c9d41cf7cd898da091f9a2 192 PIRSF PIRSF018063 30 192 3.5E-51 T 11-10-2018 IPR014490 DNA-binding protein from starved cells-like Tbd_2233 4be9704f32c9d41cf7cd898da091f9a2 192 Gene3D G3DSA:1.20.1260.10 44 192 2.1E-50 T 11-10-2018 IPR012347 Ferritin-like Tbd_2233 4be9704f32c9d41cf7cd898da091f9a2 192 Pfam PF00210 Ferritin-like domain 57 191 1.6E-28 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Tbd_0174 ebd05285607522cfc431a253c0ea13db 163 SUPERFAMILY SSF52833 3 160 9.61E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0174 ebd05285607522cfc431a253c0ea13db 163 Gene3D G3DSA:3.40.30.10 1 163 3.0E-47 T 11-10-2018 Tbd_0174 ebd05285607522cfc431a253c0ea13db 163 Pfam PF08534 Redoxin 18 159 6.9E-27 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tbd_0174 ebd05285607522cfc431a253c0ea13db 163 Hamap MF_00269 Thiol peroxidase [tpx]. 2 163 37.204 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Tbd_0174 ebd05285607522cfc431a253c0ea13db 163 ProSitePatterns PS01265 Tpx family signature. 80 91 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 410 7.1E-157 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 Gene3D G3DSA:3.20.20.10 34 275 9.8E-147 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0226 89292e9b0b7baa246d917798c466740b 414 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Tbd_0226 89292e9b0b7baa246d917798c466740b 414 Gene3D G3DSA:2.40.37.10 14 407 9.8E-147 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 SUPERFAMILY SSF50621 257 412 3.56E-52 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.4E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 368 5.4E-24 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 41.522 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 SUPERFAMILY SSF51419 26 282 6.8E-78 T 11-10-2018 IPR029066 PLP-binding barrel Tbd_0226 89292e9b0b7baa246d917798c466740b 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 8.3E-65 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 4.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 4.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 4.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 4.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_0226 89292e9b0b7baa246d917798c466740b 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 4.5E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 712 723 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SUPERFAMILY SSF52518 12 264 1.41E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 275 371 2.1E-13 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SUPERFAMILY SSF52922 266 432 4.87E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Gene3D G3DSA:3.40.50.970 819 1198 2.8E-149 T 11-10-2018 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Gene3D G3DSA:3.40.920.10 437 646 5.3E-74 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SUPERFAMILY SSF52518 818 1198 1.07E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SUPERFAMILY SSF53323 439 691 2.48E-73 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 985 1097 5.0E-10 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 PIRSF PIRSF000159 7 1205 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 24 253 1.5E-77 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SUPERFAMILY SSF54862 688 862 7.11E-21 T 11-10-2018 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Gene3D G3DSA:3.40.50.970 9 264 1.2E-103 T 11-10-2018 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF10371 Domain of unknown function 653 701 1.7E-19 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 SMART SM00890 645 702 3.3E-25 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 12 1196 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Gene3D G3DSA:3.40.50.920 265 434 1.1E-57 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF13484 4Fe-4S double cluster binding domain 712 781 1.6E-10 T 11-10-2018 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 769 780 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 446 630 3.9E-26 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tbd_2468 daec73a73b088218fbef652a35ffedd0 1207 Gene3D G3DSA:3.30.70.20 692 815 4.3E-32 T 11-10-2018 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Pfam PF01926 50S ribosome-binding GTPase 234 352 6.0E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Pfam PF13167 GTP-binding GTPase N-terminal 28 141 9.8E-26 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Gene3D G3DSA:3.40.50.11060 21 170 2.0E-32 T 11-10-2018 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Gene3D G3DSA:3.40.50.300 231 405 8.2E-37 T 11-10-2018 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 SUPERFAMILY SSF52540 232 410 2.5E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Pfam PF16360 GTP-binding GTPase Middle Region 145 225 1.4E-19 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 283 298 3.8E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 234 254 3.8E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 255 273 3.8E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 100 395 4.8E-103 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 Hamap MF_00900 GTPase HflX [hflX]. 31 427 45.168 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_1363 2014ec1df5b0e76ee4ee37a48c444c29 458 PIRSF PIRSF006809 3 458 1.2E-141 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.2E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 Pfam PF00106 short chain dehydrogenase 5 194 1.7E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 Gene3D G3DSA:3.40.50.720 2 234 1.6E-60 T 11-10-2018 Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1469 2503fdf9c09544a356531c6d2b2c636c 234 SUPERFAMILY SSF51735 5 234 3.56E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 184 4.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 185 1.4E-9 T 11-10-2018 Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 SUPERFAMILY SSF56784 1 213 2.53E-40 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 Gene3D G3DSA:3.40.50.1000 6 202 3.5E-24 T 11-10-2018 IPR023214 HAD superfamily Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.6E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 2.6E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0839 037d4bf51d0207cb353370ae30205d97 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 2.6E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 3.5E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 3.5E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 3.5E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 133 157 3.5E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 PIRSF PIRSF006648 5 248 1.4E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tbd_1893 dd2c819840d8420d31c84dd3efe419ff 251 Pfam PF01061 ABC-2 type transporter 6 213 3.7E-35 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 Pfam PF00762 Ferrochelatase 18 333 4.9E-114 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 Gene3D G3DSA:3.40.50.1400 18 334 6.9E-99 T 11-10-2018 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 TIGRFAM TIGR00109 hemH: ferrochelatase 17 334 1.0E-88 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 SUPERFAMILY SSF53800 18 340 3.6E-107 T 11-10-2018 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 36.981 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Tbd_2033 dae63b7eaa9c6fbf0a5241e0bafaa1a3 367 Gene3D G3DSA:3.40.50.1400 179 317 6.9E-99 T 11-10-2018 Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 Pfam PF00437 Type II/IV secretion system protein 120 252 7.3E-37 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 199 213 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 Gene3D G3DSA:3.40.50.300 107 362 3.6E-88 T 11-10-2018 Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 9 349 1.3E-139 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 SUPERFAMILY SSF52540 6 343 6.55E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2420 8fcf44ce5181233df5a3113177e430c7 377 Gene3D G3DSA:3.30.450.90 2 106 4.4E-32 T 11-10-2018 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 SUPERFAMILY SSF52540 368 614 2.57E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 SUPERFAMILY SSF90123 48 367 1.31E-66 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 SMART SM00382 404 590 2.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 Pfam PF00005 ABC transporter 395 544 3.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 Gene3D G3DSA:3.40.50.300 369 622 1.3E-93 T 11-10-2018 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 Gene3D G3DSA:1.20.1560.10 52 368 1.7E-112 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_1273 52d2674ca8323726ebb52bd809c23f8e 622 Pfam PF00664 ABC transporter transmembrane region 61 333 1.2E-41 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tbd_1636 c6f55e3021fe64e4fa476960000d16c0 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 132 1.1E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tbd_1636 c6f55e3021fe64e4fa476960000d16c0 134 Pfam PF00460 Flagella basal body rod protein 7 32 2.3E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_1636 c6f55e3021fe64e4fa476960000d16c0 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tbd_1636 c6f55e3021fe64e4fa476960000d16c0 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 133 8.7E-51 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.2E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 SUPERFAMILY SSF89360 1 96 6.67E-33 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.3E-53 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 Gene3D G3DSA:2.60.300.12 2 107 2.5E-37 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Tbd_1166 425228010ad0e3540eafa9ecefcfef84 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.1E-25 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Tbd_1165 5018ff39d930811a08e8894e0ec23574 128 SUPERFAMILY SSF82649 2 125 9.68E-49 T 11-10-2018 Tbd_1165 5018ff39d930811a08e8894e0ec23574 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 5.8E-69 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Tbd_1165 5018ff39d930811a08e8894e0ec23574 128 Pfam PF01592 NifU-like N terminal domain 3 125 5.3E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Tbd_1165 5018ff39d930811a08e8894e0ec23574 128 Gene3D G3DSA:3.90.1010.10 1 128 1.1E-57 T 11-10-2018 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 SMART SM00861 550 747 1.2E-60 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 28 891 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 SUPERFAMILY SSF52518 79 498 9.03E-86 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Gene3D G3DSA:3.40.50.12470 513 763 5.4E-156 T 11-10-2018 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 SUPERFAMILY SSF52518 533 752 7.46E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Pfam PF02779 Transketolase, pyrimidine binding domain 550 748 1.1E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Pfam PF00676 Dehydrogenase E1 component 173 473 2.1E-46 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Gene3D G3DSA:3.40.50.11610 684 888 5.4E-156 T 11-10-2018 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Gene3D G3DSA:1.10.287.1150 42 123 5.7E-22 T 11-10-2018 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Gene3D G3DSA:3.40.50.970 124 478 4.0E-141 T 11-10-2018 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 751 891 1.6E-40 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Tbd_1188 b1c6894e7a9d0af7ad520705e0a23f30 897 PIRSF PIRSF000157 21 893 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 TIGRFAM TIGR00496 frr: ribosome recycling factor 14 189 5.1E-67 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 Hamap MF_00040 Ribosome-recycling factor [frr]. 7 189 26.804 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 SUPERFAMILY SSF55194 8 187 2.35E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 Gene3D G3DSA:1.10.132.20 16 186 1.9E-63 T 11-10-2018 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 Gene3D G3DSA:3.30.1360.40 35 109 1.9E-63 T 11-10-2018 Tbd_0788 2dba955a88b88118d0ad1a0bdb8c7090 189 Pfam PF01765 Ribosome recycling factor 24 187 4.9E-60 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 Pfam PF01047 MarR family 34 91 4.6E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 SUPERFAMILY SSF46785 10 141 2.6E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 Gene3D G3DSA:1.10.10.10 4 142 9.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1028 0c4167fa3678a3ad052fb7df290cd426 146 SMART SM00347 27 127 8.5E-23 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Pfam PF03454 MoeA C-terminal region (domain IV) 326 392 3.1E-10 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 172 308 2.0E-32 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 SUPERFAMILY SSF63882 1 170 1.31E-50 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 162 7.2E-43 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Gene3D G3DSA:3.90.105.10 22 169 1.3E-131 T 11-10-2018 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 SUPERFAMILY SSF63867 323 394 1.7E-15 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Gene3D G3DSA:2.40.340.10 322 387 1.3E-131 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 SUPERFAMILY SSF53218 172 315 9.03E-46 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Gene3D G3DSA:3.40.980.10 170 321 1.3E-131 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 SMART SM00852 175 312 1.2E-45 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Gene3D G3DSA:2.170.190.11 45 136 1.3E-131 T 11-10-2018 Tbd_1025 ee664aa2f3125c71af04ed3a1692e720 397 Pfam PF00994 Probable molybdopterin binding domain 177 310 2.9E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 SUPERFAMILY SSF82866 79 295 1.57E-38 T 11-10-2018 Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 115 281 6.7E-51 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 2.0E-29 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 200 218 2.0E-29 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 2.0E-29 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 PRINTS PR01755 Bacterial translocase SecF protein signature 152 166 2.0E-29 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 284 5.2E-74 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 Gene3D G3DSA:1.20.1640.10 94 307 4.8E-12 T 11-10-2018 Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 295 28.141 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 Pfam PF07549 SecD/SecF GG Motif 33 59 3.9E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Tbd_2080 d80f11f231f3da207a03ccb9b4da9a2f 310 Pfam PF02355 Protein export membrane protein 109 292 1.1E-62 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 608 732 2.2E-46 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 SUPERFAMILY SSF55904 603 746 4.45E-45 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 390 404 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 PIRSF PIRSF009393 1 747 1.5E-277 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Gene3D G3DSA:3.40.640.10 150 453 4.1E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 144 1.6E-37 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Gene3D G3DSA:3.90.1150.10 457 627 8.0E-70 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 SUPERFAMILY SSF53383 150 600 3.58E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Gene3D G3DSA:3.40.50.2300 5 149 8.5E-20 T 11-10-2018 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Gene3D G3DSA:3.90.100.10 628 747 5.0E-40 T 11-10-2018 Tbd_2106 c798d68e2684ebd31119389178ba94a6 747 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 150 581 3.5E-149 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Tbd_1957 271c9dcbb04a86f94315fc837cefd35c 309 Gene3D G3DSA:2.40.10.220 190 305 3.2E-6 T 11-10-2018 Tbd_1957 271c9dcbb04a86f94315fc837cefd35c 309 Pfam PF07238 PilZ domain 194 302 2.2E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Tbd_1957 271c9dcbb04a86f94315fc837cefd35c 309 SUPERFAMILY SSF141371 194 263 4.51E-6 T 11-10-2018 Tbd_1957 271c9dcbb04a86f94315fc837cefd35c 309 Pfam PF12945 Flagellar protein YcgR 102 185 9.7E-16 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Tbd_1957 271c9dcbb04a86f94315fc837cefd35c 309 SUPERFAMILY SSF141371 93 195 8.63E-19 T 11-10-2018 Tbd_0980 d341673853a40f810fb747336c3fed7b 264 Pfam PF02405 Permease MlaE 50 258 1.8E-38 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Tbd_0148 3d11d04b23a7a694d75d39f0fdb7fda1 296 Gene3D G3DSA:3.90.1200.10 103 296 5.5E-65 T 11-10-2018 Tbd_0148 3d11d04b23a7a694d75d39f0fdb7fda1 296 PIRSF PIRSF006221 8 296 1.4E-88 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Tbd_0148 3d11d04b23a7a694d75d39f0fdb7fda1 296 Gene3D G3DSA:3.30.200.20 5 99 5.7E-13 T 11-10-2018 Tbd_0148 3d11d04b23a7a694d75d39f0fdb7fda1 296 SUPERFAMILY SSF56112 22 288 5.78E-39 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_0148 3d11d04b23a7a694d75d39f0fdb7fda1 296 Pfam PF03881 Fructosamine kinase 10 293 2.1E-100 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.7E-173 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.705 T 11-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 Gene3D G3DSA:3.40.1670.10 337 454 5.2E-51 T 11-10-2018 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.3E-172 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 Gene3D G3DSA:1.20.5.570 455 487 7.6E-17 T 11-10-2018 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 SUPERFAMILY SSF50475 3 322 7.45E-127 T 11-10-2018 Tbd_0104 3483318ab4c6dc363882a1a8b0ba52ea 487 SUPERFAMILY SSF143968 323 487 3.53E-67 T 11-10-2018 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 118 1.2E-36 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 117 2.0E-28 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 Gene3D G3DSA:1.20.1300.10 2 124 1.2E-32 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 PIRSF PIRSF000178 2 125 2.1E-23 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1182 b5ac07eec91c21804ce4a246ba7f792d 126 SUPERFAMILY SSF81343 4 122 2.05E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 SUPERFAMILY SSF56655 3 332 6.16E-116 T 11-10-2018 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 334 47.24 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PIRSF PIRSF000904 1 337 1.3E-128 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 Gene3D G3DSA:3.30.540.10 1 196 2.6E-74 T 11-10-2018 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 6.6E-69 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 195 8.1E-64 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 Gene3D G3DSA:3.40.190.80 197 334 1.5E-54 T 11-10-2018 Tbd_2577 f5af6e1ccdca55e22a9bd52a95e55664 337 PIRSF PIRSF500210 1 337 2.2E-131 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Tbd_0358 895b8cfa077ffadda526e146604102e2 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 132 6.2E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tbd_0358 895b8cfa077ffadda526e146604102e2 135 Gene3D G3DSA:3.30.420.270 61 128 2.4E-15 T 11-10-2018 Tbd_0169 ac88434418fa3203cf04212ba15c1d5e 273 Pfam PF01553 Acyltransferase 74 185 9.6E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_0169 ac88434418fa3203cf04212ba15c1d5e 273 SUPERFAMILY SSF69593 61 253 6.41E-27 T 11-10-2018 Tbd_0169 ac88434418fa3203cf04212ba15c1d5e 273 SMART SM00563 77 189 2.1E-30 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 SMART SM00418 27 107 9.2E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 1.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 1.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 Gene3D G3DSA:1.10.10.10 16 112 1.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 Pfam PF12840 Helix-turn-helix domain 28 88 1.0E-9 T 11-10-2018 Tbd_1736 59f7d788c9077640a8bb3bfb791bd3c6 131 SUPERFAMILY SSF46785 17 112 8.19E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 SUPERFAMILY SSF51905 2 188 6.98E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 Gene3D G3DSA:3.30.390.120 313 376 9.8E-18 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 Gene3D G3DSA:3.50.50.60 6 277 4.7E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 276 1.5E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 4.9E-13 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.9E-13 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 4.9E-13 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 4.9E-13 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 Gene3D G3DSA:3.50.50.60 107 241 4.7E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 5.3E-19 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.3E-19 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 5.3E-19 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 5.3E-19 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 5.3E-19 T 11-10-2018 Tbd_2315 6666045cd9d3e183fe8ee97eb2c5d571 378 SUPERFAMILY SSF51905 142 302 5.18E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0040 a934bf2aca73a2eddf99b1ab059400f0 513 Pfam PF01435 Peptidase family M48 94 284 4.9E-38 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_0040 a934bf2aca73a2eddf99b1ab059400f0 513 Gene3D G3DSA:3.30.2010.10 88 173 1.6E-8 T 11-10-2018 Tbd_0563 9a32002887053c338062c80dab0eff07 610 SUPERFAMILY SSF56300 71 412 9.99E-77 T 11-10-2018 Tbd_0563 9a32002887053c338062c80dab0eff07 610 Gene3D G3DSA:3.60.21.10 132 412 2.1E-79 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_0563 9a32002887053c338062c80dab0eff07 610 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 34 594 2.0E-267 T 11-10-2018 IPR030998 Thiosulfohydrolase SoxB Tbd_0563 9a32002887053c338062c80dab0eff07 610 SUPERFAMILY SSF55816 410 593 7.32E-32 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 Pfam PF02872 5'-nucleotidase, C-terminal domain 433 555 1.0E-15 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 Gene3D G3DSA:3.90.780.10 413 602 6.7E-72 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 PRINTS PR01607 Apyrase family signature 318 341 6.3E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 PRINTS PR01607 Apyrase family signature 544 563 6.3E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 PRINTS PR01607 Apyrase family signature 299 316 6.3E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 PRINTS PR01607 Apyrase family signature 73 91 6.3E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0563 9a32002887053c338062c80dab0eff07 610 PRINTS PR01607 Apyrase family signature 350 370 6.3E-12 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 342 8.0E-182 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 Gene3D G3DSA:3.40.50.720 5 326 3.1E-170 T 11-10-2018 Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 335 4.8E-161 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 345 57.336 T 11-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 Gene3D G3DSA:3.90.25.10 193 340 3.1E-170 T 11-10-2018 Tbd_1776 3086d6eb7bb0881884ceed26a56f300e 361 SUPERFAMILY SSF51735 3 341 1.78E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 Gene3D G3DSA:1.20.58.180 207 288 2.8E-33 T 11-10-2018 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 3 283 59.354 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 5 281 2.3E-149 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 SUPERFAMILY SSF55681 4 282 2.49E-131 T 11-10-2018 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 78 98 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 109 133 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 158 173 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 243 259 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 57 72 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 135 155 4.5E-68 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 Gene3D G3DSA:3.30.930.10 1 206 9.5E-111 T 11-10-2018 Tbd_2348 e1552164b9f7308c02a3fad9a7e25f79 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 4 289 7.7E-154 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 Gene3D G3DSA:3.40.1280.10 7 170 6.1E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 9 240 3.6E-67 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 Gene3D G3DSA:1.10.8.590 174 255 2.9E-24 T 11-10-2018 Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 Pfam PF00588 SpoU rRNA Methylase family 12 161 7.8E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 PIRSF PIRSF004808 7 248 5.0E-71 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Tbd_1161 8629cb151139c628d3e7c2da55a32308 256 SUPERFAMILY SSF75217 11 192 7.85E-38 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR01900 YidC translocation/secretion protein signature 469 484 5.4E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.4E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR01900 YidC translocation/secretion protein signature 340 356 5.4E-23 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 353 4.1E-108 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 Pfam PF02096 60Kd inner membrane protein 355 533 3.6E-60 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 354 533 8.4E-71 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 23.726 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 Pfam PF14849 YidC periplasmic domain 70 343 1.4E-80 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 325 345 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 499 522 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 252 267 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 217 235 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 463 485 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 163 183 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 75 96 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 PRINTS PR00701 60kDa inner membrane protein signature 416 439 7.2E-72 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tbd_2825 670d2892b8637a20afb04c1bb2cff25e 546 Gene3D G3DSA:2.70.98.90 65 334 1.2E-84 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 333 8.3E-79 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.5E-28 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 SUPERFAMILY SSF48019 214 337 6.04E-21 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 Gene3D G3DSA:3.40.50.300 1 139 2.0E-47 T 11-10-2018 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 Gene3D G3DSA:1.10.8.60 142 211 4.6E-26 T 11-10-2018 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 Gene3D G3DSA:1.20.272.10 215 341 8.5E-17 T 11-10-2018 Tbd_2443 dacf5ed9ff266857bb7e3656c1d0d8da 344 SUPERFAMILY SSF52540 6 209 1.59E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 199 4.0E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 161 1.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 163 183 1.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.2E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 Gene3D G3DSA:1.10.150.240 17 98 1.2E-73 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 5.3E-22 T 11-10-2018 Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 Gene3D G3DSA:3.40.50.1000 5 218 1.2E-73 T 11-10-2018 IPR023214 HAD superfamily Tbd_0690 becfcf6e5a734539858d70a34a9ef36b 253 SUPERFAMILY SSF56784 1 223 2.44E-44 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 22 47 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 7.7E-121 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 23 525 1.2E-216 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 SUPERFAMILY SSF81442 19 525 9.42E-197 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 31 473 9.5E-157 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0326 5416427b61f07ddddb79142cb93e1ff0 526 Gene3D G3DSA:1.20.210.10 10 526 7.1E-224 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0967 99398c110ab5bf9f5b43866657950df0 300 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 274 5.3E-21 T 11-10-2018 IPR017039 Virulence factor BrkB Tbd_0967 99398c110ab5bf9f5b43866657950df0 300 Pfam PF03631 Virulence factor BrkB 24 277 1.4E-54 T 11-10-2018 IPR017039 Virulence factor BrkB Tbd_0967 99398c110ab5bf9f5b43866657950df0 300 PIRSF PIRSF035875 2 296 4.2E-64 T 11-10-2018 IPR017039 Virulence factor BrkB Tbd_1725 442026e34715b1c98cc8701e32706125 229 SUPERFAMILY SSF53067 1 101 3.76E-28 T 11-10-2018 Tbd_1725 442026e34715b1c98cc8701e32706125 229 Gene3D G3DSA:3.30.420.40 3 213 8.6E-71 T 11-10-2018 Tbd_1725 442026e34715b1c98cc8701e32706125 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 213 6.8E-60 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Tbd_1725 442026e34715b1c98cc8701e32706125 229 Gene3D G3DSA:3.30.420.40 94 182 8.6E-71 T 11-10-2018 Tbd_1725 442026e34715b1c98cc8701e32706125 229 SUPERFAMILY SSF53067 105 211 6.6E-22 T 11-10-2018 Tbd_1725 442026e34715b1c98cc8701e32706125 229 Pfam PF00814 Glycoprotease family 29 139 1.6E-27 T 11-10-2018 IPR000905 Gcp-like domain Tbd_0068 541bf473ec36383de52a93e5874e82a5 212 Gene3D G3DSA:3.60.15.10 1 209 7.7E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0068 541bf473ec36383de52a93e5874e82a5 212 SMART SM00849 12 191 8.7E-44 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0068 541bf473ec36383de52a93e5874e82a5 212 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 2.1E-31 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0068 541bf473ec36383de52a93e5874e82a5 212 SUPERFAMILY SSF56281 2 207 1.44E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 Gene3D G3DSA:3.30.450.90 158 294 3.0E-47 T 11-10-2018 Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 Gene3D G3DSA:3.40.50.300 299 570 4.9E-104 T 11-10-2018 Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 Gene3D G3DSA:3.30.300.160 68 146 4.0E-6 T 11-10-2018 Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 Pfam PF00437 Type II/IV secretion system protein 194 461 7.4E-88 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 389 403 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 SUPERFAMILY SSF52540 182 568 1.27E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 18 150 2.2E-16 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 SUPERFAMILY SSF160246 7 145 6.02E-33 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_2370 6dd12cc53a6aabff2aa64a9bf3326661 571 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 570 1.2E-252 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Tbd_0272 f89910e94cf78e29ec94440f8e5cefa2 182 Pfam PF00578 AhpC/TSA family 43 159 3.5E-24 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_0272 f89910e94cf78e29ec94440f8e5cefa2 182 Gene3D G3DSA:3.40.30.10 21 182 1.1E-45 T 11-10-2018 Tbd_0272 f89910e94cf78e29ec94440f8e5cefa2 182 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0272 f89910e94cf78e29ec94440f8e5cefa2 182 SUPERFAMILY SSF52833 37 180 2.45E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2758 7bdf7da11bb4536e26afdec19f324b87 256 Gene3D G3DSA:3.40.50.150 39 254 1.8E-43 T 11-10-2018 Tbd_2758 7bdf7da11bb4536e26afdec19f324b87 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 157 171 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Tbd_2758 7bdf7da11bb4536e26afdec19f324b87 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 241 5.0E-27 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Tbd_2758 7bdf7da11bb4536e26afdec19f324b87 256 SUPERFAMILY SSF53335 34 239 6.43E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0672 a0074d286b440710b92d1e7509f3dcd8 171 Pfam PF01381 Helix-turn-helix 20 70 1.2E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tbd_0672 a0074d286b440710b92d1e7509f3dcd8 171 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 83 3.9E-32 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Tbd_0672 a0074d286b440710b92d1e7509f3dcd8 171 Gene3D G3DSA:1.10.260.40 2 101 3.8E-32 T 11-10-2018 Tbd_0672 a0074d286b440710b92d1e7509f3dcd8 171 SMART SM00530 15 71 3.1E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tbd_0672 a0074d286b440710b92d1e7509f3dcd8 171 SUPERFAMILY SSF47413 11 93 4.22E-24 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 Pfam PF01016 Ribosomal L27 protein 2 81 1.2E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 3.0E-19 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 Gene3D G3DSA:2.40.50.100 20 86 2.3E-31 T 11-10-2018 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 9.0E-41 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 SUPERFAMILY SSF110324 2 81 2.37E-35 T 11-10-2018 Tbd_0865 1f951f72d0e3f7c505e43748c0119f94 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.952 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 Gene3D G3DSA:3.60.120.10 4 441 2.7E-138 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 SUPERFAMILY SSF56322 75 440 2.22E-121 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 PRINTS PR00095 Anthranilate synthase component I signature 388 402 1.8E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 PRINTS PR00095 Anthranilate synthase component I signature 373 387 1.8E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.8E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 PRINTS PR00095 Anthranilate synthase component I signature 279 292 1.8E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_1546 8c4e90d2b70d4b97a746431d1025815e 442 Pfam PF00425 chorismate binding enzyme 178 431 7.1E-91 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Tbd_2633 8c15bd879c371302619a5e9820ebc747 195 Gene3D G3DSA:3.30.530.20 16 135 1.0E-38 T 11-10-2018 IPR023393 START-like domain superfamily Tbd_2633 8c15bd879c371302619a5e9820ebc747 195 SUPERFAMILY SSF55961 17 130 2.28E-27 T 11-10-2018 Tbd_1383 564d142ec7f85d6ee538899b0af3c0f2 268 Gene3D G3DSA:3.40.50.300 36 246 6.9E-61 T 11-10-2018 Tbd_1383 564d142ec7f85d6ee538899b0af3c0f2 268 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 30 239 9.9E-83 T 11-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Tbd_1383 564d142ec7f85d6ee538899b0af3c0f2 268 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 56 218 2.0E-28 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Tbd_1383 564d142ec7f85d6ee538899b0af3c0f2 268 SUPERFAMILY SSF52540 25 240 2.89E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1383 564d142ec7f85d6ee538899b0af3c0f2 268 PIRSF PIRSF005624 20 253 1.3E-91 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Tbd_1124 38be81de53ca8a4128966c321c460b3d 342 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 120 28.144 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE Tbd_1124 38be81de53ca8a4128966c321c460b3d 342 Gene3D G3DSA:3.30.1450.10 38 112 9.9E-26 T 11-10-2018 IPR037873 BamE-like Tbd_1124 38be81de53ca8a4128966c321c460b3d 342 Gene3D G3DSA:3.10.450.50 214 335 1.5E-6 T 11-10-2018 Tbd_1124 38be81de53ca8a4128966c321c460b3d 342 Pfam PF04355 SmpA / OmlA family 32 100 5.6E-22 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Tbd_1124 38be81de53ca8a4128966c321c460b3d 342 SUPERFAMILY SSF54427 225 331 2.97E-13 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_1633 ec4db2087d825e4a04dbee74538b24d7 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 7.1E-55 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Tbd_1633 ec4db2087d825e4a04dbee74538b24d7 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 2.5E-39 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tbd_1633 ec4db2087d825e4a04dbee74538b24d7 246 Pfam PF00460 Flagella basal body rod protein 5 35 2.6E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_1633 ec4db2087d825e4a04dbee74538b24d7 246 SUPERFAMILY SSF117143 78 204 2.62E-22 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tbd_1633 ec4db2087d825e4a04dbee74538b24d7 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 242 2.3E-20 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tbd_0230 1b392d5203eeaa71378454506fc82aa7 358 Gene3D G3DSA:3.30.565.10 202 333 5.1E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0230 1b392d5203eeaa71378454506fc82aa7 358 Pfam PF06580 Histidine kinase 147 225 1.1E-22 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Tbd_0230 1b392d5203eeaa71378454506fc82aa7 358 SUPERFAMILY SSF55874 202 283 3.23E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2284 817edddcc9bb86e6c4421cc6e3fbd02e 282 SUPERFAMILY SSF103501 79 230 7.45E-6 T 11-10-2018 IPR036197 NarG-like superfamily Tbd_1234 55821fd2b679778b6269ca6139af8469 509 Pfam PF04293 SpoVR like protein 23 453 1.4E-177 T 11-10-2018 IPR007390 Sporulation stage V, protein R Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 SUPERFAMILY SSF56317 1 251 1.96E-65 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 532 28.558 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 Gene3D G3DSA:3.40.50.620 261 533 9.3E-115 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 PIRSF PIRSF006630 1 533 2.1E-189 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 SUPERFAMILY SSF52402 254 516 1.4E-76 T 11-10-2018 Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 TIGRFAM TIGR00552 nadE: NAD+ synthetase 265 511 3.6E-59 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 Pfam PF02540 NAD synthase 259 506 1.7E-72 T 11-10-2018 IPR022310 NAD/GMP synthase Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 Gene3D G3DSA:3.60.110.10 1 260 3.5E-88 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tbd_0807 a31fa8c0c97881e05ff1e711b8a4af21 537 Pfam PF00795 Carbon-nitrogen hydrolase 2 243 6.6E-36 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Pfam PF08751 TrwC relaxase 12 284 2.7E-85 T 11-10-2018 IPR014862 TrwC relaxase Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Pfam PF13604 AAA domain 428 605 2.7E-42 T 11-10-2018 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Gene3D G3DSA:3.40.50.300 806 868 4.1E-13 T 11-10-2018 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Gene3D G3DSA:3.40.50.300 387 595 3.6E-34 T 11-10-2018 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 SUPERFAMILY SSF55464 7 288 1.88E-84 T 11-10-2018 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Gene3D G3DSA:2.30.30.940 744 805 4.1E-13 T 11-10-2018 Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 SUPERFAMILY SSF52540 425 573 1.93E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 SUPERFAMILY SSF52540 537 862 1.35E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 14 286 1.0E-75 T 11-10-2018 IPR014059 Conjugative relaxase, N-terminal Tbd_1820 34339bb70ae1e0d535353898240b4a57 929 Pfam PF01443 Viral (Superfamily 1) RNA helicase 806 852 1.3E-4 T 11-10-2018 IPR027351 (+) RNA virus helicase core domain GO:0005524 Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Gene3D G3DSA:3.40.50.300 15 276 9.4E-93 T 11-10-2018 Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Pfam PF13361 UvrD-like helicase C-terminal domain 281 621 4.1E-67 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 SUPERFAMILY SSF52540 10 645 1.92E-169 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Gene3D G3DSA:1.10.486.10 386 545 7.7E-114 T 11-10-2018 Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 275 3.4E-71 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Gene3D G3DSA:1.10.10.160 119 191 9.4E-93 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Tbd_2449 ad28e4ced345920b84d75bcf1b662c07 726 Gene3D G3DSA:3.40.50.300 284 638 7.7E-114 T 11-10-2018 Tbd_1921 81b773d5f784affc01352c0848bc76b1 212 Gene3D G3DSA:3.20.19.10 1 184 2.9E-76 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tbd_1921 81b773d5f784affc01352c0848bc76b1 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.139 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Tbd_1921 81b773d5f784affc01352c0848bc76b1 212 SUPERFAMILY SSF52016 1 205 1.77E-62 T 11-10-2018 Tbd_1921 81b773d5f784affc01352c0848bc76b1 212 Pfam PF00694 Aconitase C-terminal domain 1 131 2.2E-37 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tbd_1921 81b773d5f784affc01352c0848bc76b1 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 2.8E-82 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Tbd_0835 adceb59880b03d43c8b523621239b823 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 40.008 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tbd_0835 adceb59880b03d43c8b523621239b823 247 Pfam PF01975 Survival protein SurE 3 182 5.1E-60 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tbd_0835 adceb59880b03d43c8b523621239b823 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 6.3E-72 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tbd_0835 adceb59880b03d43c8b523621239b823 247 SUPERFAMILY SSF64167 1 246 1.57E-87 T 11-10-2018 Tbd_0835 adceb59880b03d43c8b523621239b823 247 Gene3D G3DSA:3.40.1210.10 1 247 7.3E-95 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 Gene3D G3DSA:2.40.50.140 350 419 1.0E-15 T 11-10-2018 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 Pfam PF00905 Penicillin binding protein transpeptidase domain 424 670 3.5E-40 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 Pfam PF00912 Transglycosylase 57 231 2.3E-65 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 Pfam PF17092 Penicillin-binding protein OB-like domain 318 421 6.1E-21 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 Gene3D G3DSA:1.10.3810.10 51 244 2.5E-75 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 SUPERFAMILY SSF56601 213 738 1.71E-128 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 SUPERFAMILY SSF53955 44 254 4.22E-76 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_0201 245ef4682913430a52c4f48b1c66efff 793 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 67 707 2.1E-191 T 11-10-2018 Tbd_1200 728ba7cc7e05a63344850ad90de9f4d8 305 Gene3D G3DSA:3.20.20.100 36 301 4.6E-42 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tbd_1200 728ba7cc7e05a63344850ad90de9f4d8 305 SUPERFAMILY SSF51430 34 294 1.3E-49 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tbd_1200 728ba7cc7e05a63344850ad90de9f4d8 305 Pfam PF00248 Aldo/keto reductase family 47 294 2.1E-29 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 Gene3D G3DSA:1.20.1560.10 5 332 8.4E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 Gene3D G3DSA:3.40.50.300 349 588 9.0E-85 T 11-10-2018 Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 SMART SM00382 379 564 2.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 SUPERFAMILY SSF90123 9 331 1.83E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 Pfam PF00005 ABC transporter 370 518 5.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 SUPERFAMILY SSF52540 350 586 1.78E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2816 60fd10acb1aa1a95fd5b2fa5e5c340f1 588 Pfam PF00664 ABC transporter transmembrane region 75 307 8.6E-27 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tbd_2434 519b3c9316fd1d98c85681c78b51f372 179 Gene3D G3DSA:3.40.30.10 74 151 1.2E-11 T 11-10-2018 Tbd_2434 519b3c9316fd1d98c85681c78b51f372 179 SUPERFAMILY SSF52833 74 147 6.94E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2434 519b3c9316fd1d98c85681c78b51f372 179 Pfam PF00462 Glutaredoxin 85 133 7.8E-7 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Tbd_2434 519b3c9316fd1d98c85681c78b51f372 179 Pfam PF13511 Domain of unknown function (DUF4124) 12 48 1.3E-7 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 Gene3D G3DSA:3.90.25.10 200 329 7.8E-130 T 11-10-2018 Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 Gene3D G3DSA:3.40.50.720 2 321 7.8E-130 T 11-10-2018 Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 4.5E-151 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 9.4E-99 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_1780 58ea5f1fd8624d0028e7e1a2c1c07753 355 SUPERFAMILY SSF51735 2 348 1.09E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1933 1c19aa5cd8387e9d322982c9398bb59a 423 Gene3D G3DSA:3.40.50.720 3 297 7.3E-46 T 11-10-2018 Tbd_1933 1c19aa5cd8387e9d322982c9398bb59a 423 Pfam PF13460 NAD(P)H-binding 7 147 2.9E-16 T 11-10-2018 IPR016040 NAD(P)-binding domain Tbd_1933 1c19aa5cd8387e9d322982c9398bb59a 423 Pfam PF13781 DoxX-like family 314 415 3.4E-30 T 11-10-2018 IPR025695 DoxX-like family Tbd_1933 1c19aa5cd8387e9d322982c9398bb59a 423 SUPERFAMILY SSF51735 1 257 2.25E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 Pfam PF13286 Phosphohydrolase-associated domain 282 367 1.2E-26 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 Pfam PF01966 HD domain 65 195 1.6E-15 T 11-10-2018 IPR006674 HD domain Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 369 38.234 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 SMART SM00471 61 205 2.4E-11 T 11-10-2018 IPR003607 HD/PDEase domain Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 369 8.9E-90 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 Gene3D G3DSA:1.10.3210.10 1 370 3.6E-132 T 11-10-2018 Tbd_0316 8ed7cfa6af9c241c5d54c138b8cf8294 376 SUPERFAMILY SSF109604 16 369 3.98E-90 T 11-10-2018 Tbd_0593 a2e99e8d153496e4e5be5cc37424c3b6 291 Pfam PF13464 Domain of unknown function (DUF4115) 217 290 2.5E-22 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 Tbd_0593 a2e99e8d153496e4e5be5cc37424c3b6 291 Gene3D G3DSA:1.10.260.40 3 92 9.5E-24 T 11-10-2018 Tbd_0593 a2e99e8d153496e4e5be5cc37424c3b6 291 Pfam PF13413 Helix-turn-helix domain 13 72 7.6E-23 T 11-10-2018 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 251 8.9E-83 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 Gene3D G3DSA:1.10.8.100 191 255 1.2E-20 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 Gene3D G3DSA:3.40.50.150 1 188 8.3E-65 T 11-10-2018 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 253 55.929 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 Pfam PF00398 Ribosomal RNA adenine dimethylase 2 252 1.7E-60 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 SUPERFAMILY SSF53335 1 252 1.19E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2340 a805d5decb206ad88a675ccde1f1058d 255 SMART SM00650 18 186 1.1E-83 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Gene3D G3DSA:3.40.50.300 273 418 3.2E-52 T 11-10-2018 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 SUPERFAMILY SSF52540 9 419 5.66E-134 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Gene3D G3DSA:3.40.50.300 2 244 2.6E-69 T 11-10-2018 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 10 665 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 667 43.488 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Pfam PF04851 Type III restriction enzyme, res subunit 21 132 5.1E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 SMART SM00490 464 550 1.6E-20 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 SUPERFAMILY SSF46600 621 669 2.22E-12 T 11-10-2018 IPR036876 UVR domain superfamily Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Pfam PF12344 Ultra-violet resistance protein B 556 598 1.7E-22 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Pfam PF02151 UvrB/uvrC motif 633 666 1.5E-10 T 11-10-2018 IPR001943 UVR domain GO:0005515 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 SMART SM00487 14 430 2.1E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Gene3D G3DSA:3.40.50.300 419 600 4.0E-51 T 11-10-2018 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Gene3D G3DSA:4.10.860.10 615 671 9.3E-15 T 11-10-2018 Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 Pfam PF00271 Helicase conserved C-terminal domain 440 548 2.8E-18 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_1568 bdc77401ca7d547c1d6fd183c0632c66 675 SUPERFAMILY SSF52540 42 589 6.55E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 155 231 1.3E-21 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 154 231 6.4E-22 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 SUPERFAMILY SSF74653 119 233 1.57E-24 T 11-10-2018 Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 Gene3D G3DSA:3.30.1150.10 106 233 3.8E-23 T 11-10-2018 Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 170 188 8.9E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 8.9E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_0910 bf48cce4ce236a0a377059f2426fffd0 234 PRINTS PR01374 Gram-negative bacterial tonB protein signature 149 170 8.9E-7 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_0256 1416a33c3f1265de3ee95f03047a3f1b 215 Pfam PF13511 Domain of unknown function (DUF4124) 26 86 3.1E-13 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 Gene3D G3DSA:3.30.70.20 233 321 1.5E-93 T 11-10-2018 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 429 1.2E-149 T 11-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 SUPERFAMILY SSF54862 222 318 4.51E-13 T 11-10-2018 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 SUPERFAMILY SSF55124 6 161 1.26E-56 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 88 152 4.5E-7 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 SUPERFAMILY SSF56014 163 419 5.52E-50 T 11-10-2018 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 Gene3D G3DSA:3.30.413.10 159 413 1.5E-93 T 11-10-2018 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 161 397 2.0E-33 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_1369 652d1ff924f3680559ffda4d96eb4256 434 Gene3D G3DSA:3.30.70.2500 54 158 2.1E-39 T 11-10-2018 Tbd_1132 140c5869db0d45a9ffceafb855c032bc 220 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 16 209 30.194 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Tbd_1132 140c5869db0d45a9ffceafb855c032bc 220 SUPERFAMILY SSF53335 31 207 2.32E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1132 140c5869db0d45a9ffceafb855c032bc 220 Pfam PF01728 FtsJ-like methyltransferase 32 206 7.3E-57 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Tbd_1132 140c5869db0d45a9ffceafb855c032bc 220 PIRSF PIRSF005461 2 216 9.2E-77 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Tbd_1132 140c5869db0d45a9ffceafb855c032bc 220 Gene3D G3DSA:3.40.50.150 31 208 4.5E-61 T 11-10-2018 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 SUPERFAMILY SSF46977 529 662 4.84E-39 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 16 662 5.5E-275 T 11-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 PIRSF PIRSF000171 5 667 4.3E-257 T 11-10-2018 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 SUPERFAMILY SSF51905 10 515 2.14E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 Gene3D G3DSA:3.90.700.10 291 421 1.7E-266 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 SUPERFAMILY SSF56425 266 411 2.93E-65 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 Gene3D G3DSA:3.50.50.90 14 658 1.7E-266 T 11-10-2018 Tbd_0872 be09ec6882e30bbdb54831a423d84f6a 673 Pfam PF00890 FAD binding domain 16 272 1.3E-7 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1560 1afe62056642ce24794572c848fd2697 313 Gene3D G3DSA:3.40.1750.20 167 233 1.6E-64 T 11-10-2018 Tbd_1560 1afe62056642ce24794572c848fd2697 313 Pfam PF01343 Peptidase family S49 129 271 3.1E-35 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Tbd_1560 1afe62056642ce24794572c848fd2697 313 SUPERFAMILY SSF52096 44 264 1.87E-43 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tbd_1560 1afe62056642ce24794572c848fd2697 313 Gene3D G3DSA:3.90.226.10 68 267 1.6E-64 T 11-10-2018 Tbd_0191 62195961647a455d9f3ccac85c86ab54 291 SUPERFAMILY SSF69572 9 266 2.49E-51 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tbd_0191 62195961647a455d9f3ccac85c86ab54 291 Pfam PF00899 ThiF family 13 258 1.1E-39 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tbd_0191 62195961647a455d9f3ccac85c86ab54 291 Gene3D G3DSA:3.40.50.720 7 269 2.8E-42 T 11-10-2018 Tbd_2010 225240f2a2a117a1bb59dcf2f65c592f 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 216 6.5E-28 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Tbd_2010 225240f2a2a117a1bb59dcf2f65c592f 222 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 19 171 9.7E-14 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Tbd_2010 225240f2a2a117a1bb59dcf2f65c592f 222 SUPERFAMILY SSF101327 17 183 3.79E-10 T 11-10-2018 IPR036255 YgfB-like superfamily Tbd_0481 05daa7b2f503f5b96b5d4856797e2dde 215 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 89 105 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_0481 05daa7b2f503f5b96b5d4856797e2dde 215 SUPERFAMILY SSF55620 21 209 1.04E-55 T 11-10-2018 Tbd_0481 05daa7b2f503f5b96b5d4856797e2dde 215 Gene3D G3DSA:3.30.1130.10 80 213 1.3E-36 T 11-10-2018 Tbd_0481 05daa7b2f503f5b96b5d4856797e2dde 215 Pfam PF01227 GTP cyclohydrolase I 33 208 5.8E-47 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 Pfam PF03471 Transporter associated domain 344 419 1.4E-14 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 SMART SM01091 343 421 4.2E-20 T 11-10-2018 IPR005170 Transporter-associated domain Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 SUPERFAMILY SSF54631 196 331 8.14E-26 T 11-10-2018 Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 SUPERFAMILY SSF56176 342 422 3.82E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 Gene3D G3DSA:3.10.580.10 189 341 2.7E-43 T 11-10-2018 Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 Gene3D G3DSA:3.30.465.10 342 419 5.5E-20 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 Pfam PF01595 Domain of unknown function DUF21 13 185 1.4E-42 T 11-10-2018 IPR002550 CNNM, transmembrane domain Tbd_2371 1349be2cf00918204fff31b8d8e8a98d 432 Pfam PF00571 CBS domain 283 328 3.2E-5 T 11-10-2018 IPR000644 CBS domain Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 SUPERFAMILY SSF52540 6 244 2.73E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 Pfam PF08402 TOBE domain 283 352 6.9E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 Gene3D G3DSA:2.40.50.940 224 353 5.9E-10 T 11-10-2018 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 Gene3D G3DSA:3.40.50.300 4 223 6.4E-60 T 11-10-2018 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 Gene3D G3DSA:2.40.50.140 290 344 5.9E-10 T 11-10-2018 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 SUPERFAMILY SSF50331 243 352 4.68E-11 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 Pfam PF00005 ABC transporter 21 163 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0988 e5d4795b4a2ca84f9612d96dfd72d6e4 355 SMART SM00382 28 213 5.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0212 51f06f3ff9ced9835c2e6904f95464bb 475 Pfam PF00474 Sodium:solute symporter family 30 430 4.9E-33 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tbd_0212 51f06f3ff9ced9835c2e6904f95464bb 475 Gene3D G3DSA:1.20.1730.10 4 474 1.7E-61 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Tbd_0723 c873e379589c8f4ff097ff0b85303be2 657 Gene3D G3DSA:1.10.760.10 120 234 3.3E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0723 c873e379589c8f4ff097ff0b85303be2 657 Pfam PF00034 Cytochrome c 146 226 3.1E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0723 c873e379589c8f4ff097ff0b85303be2 657 SUPERFAMILY SSF46626 127 228 2.82E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0723 c873e379589c8f4ff097ff0b85303be2 657 Pfam PF03239 Iron permease FTR1 family 506 600 1.8E-14 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Tbd_0723 c873e379589c8f4ff097ff0b85303be2 657 Pfam PF03239 Iron permease FTR1 family 371 493 1.8E-17 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 SUPERFAMILY SSF90123 12 324 2.49E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 Pfam PF00664 ABC transporter transmembrane region 25 295 6.0E-58 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 10 578 1.8E-246 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 Pfam PF00005 ABC transporter 357 506 8.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 Gene3D G3DSA:3.40.50.300 326 578 6.0E-94 T 11-10-2018 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 Gene3D G3DSA:1.20.1560.10 2 325 1.8E-88 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 SMART SM00382 365 552 1.6E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2507 89fc34e11df0235f1b1425c2d6525342 579 SUPERFAMILY SSF52540 330 577 1.46E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0878 14fa96de126395d5c1df83707c093f11 269 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 11 265 37.904 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Tbd_0878 14fa96de126395d5c1df83707c093f11 269 Pfam PF02649 Type I GTP cyclohydrolase folE2 11 260 1.5E-97 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Tbd_0878 14fa96de126395d5c1df83707c093f11 269 Gene3D G3DSA:3.10.270.10 9 265 1.2E-100 T 11-10-2018 Tbd_2525 4dcbf248905a7b92b2c73bfe8959d76a 139 Pfam PF13380 CoA binding domain 19 132 2.7E-37 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_2525 4dcbf248905a7b92b2c73bfe8959d76a 139 SUPERFAMILY SSF51735 4 136 1.01E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2525 4dcbf248905a7b92b2c73bfe8959d76a 139 SMART SM00881 14 107 1.8E-22 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Tbd_2525 4dcbf248905a7b92b2c73bfe8959d76a 139 Gene3D G3DSA:3.40.50.720 2 138 8.3E-42 T 11-10-2018 Tbd_2819 de664cbb716571e5bb80ad543f593f39 676 Pfam PF06048 Domain of unknown function (DUF927) 125 403 4.1E-99 T 11-10-2018 IPR009270 Domain of unknown function DUF927 Tbd_1057 376bd788967b64761823defcf3a38015 171 Pfam PF03167 Uracil DNA glycosylase superfamily 11 161 1.1E-7 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1057 376bd788967b64761823defcf3a38015 171 SUPERFAMILY SSF52141 7 167 1.57E-35 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1057 376bd788967b64761823defcf3a38015 171 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 162 6.9E-49 T 11-10-2018 IPR026353 Hypoxanthine-DNA glycosylase Tbd_1057 376bd788967b64761823defcf3a38015 171 SMART SM00986 8 166 1.9E-15 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1057 376bd788967b64761823defcf3a38015 171 SMART SM00987 8 166 1.9E-15 T 11-10-2018 Tbd_1057 376bd788967b64761823defcf3a38015 171 Gene3D G3DSA:3.40.470.10 3 171 1.9E-52 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 472 501 5.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 571 600 5.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 94 182 1.9E-11 T 11-10-2018 IPR029095 NarX-like, N-terminal Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 672 6.5E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 SUPERFAMILY SSF58104 406 706 4.97E-64 T 11-10-2018 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 Gene3D G3DSA:1.10.287.950 379 707 7.2E-62 T 11-10-2018 Tbd_2549 0628f5a39d6bfda8cb254afb7ef52afd 707 SMART SM00283 444 705 6.9E-83 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tbd_2451 930c034a44a5da6e0c48c5b535f638ad 107 Gene3D G3DSA:2.20.130.30 35 107 7.2E-24 T 11-10-2018 Tbd_2451 930c034a44a5da6e0c48c5b535f638ad 107 Pfam PF11191 Protein of unknown function (DUF2782) 30 107 3.3E-28 T 11-10-2018 IPR021357 Protein of unknown function DUF2782 Tbd_0009 bff8c8ab6974f805be229a582cbd3cb7 130 SUPERFAMILY SSF52172 21 124 1.37E-5 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0009 bff8c8ab6974f805be229a582cbd3cb7 130 Gene3D G3DSA:3.40.50.2300 12 129 8.0E-6 T 11-10-2018 Tbd_0353 fa0168b99e63e4c9e32bd9d83f5b5d1b 469 Gene3D G3DSA:3.40.190.10 202 393 2.9E-6 T 11-10-2018 Tbd_1625 71f87373e23574282c4418cc51040252 120 SUPERFAMILY SSF52172 1 119 7.68E-37 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_1625 71f87373e23574282c4418cc51040252 120 Pfam PF00072 Response regulator receiver domain 4 115 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_1625 71f87373e23574282c4418cc51040252 120 Gene3D G3DSA:3.40.50.12740 2 120 1.4E-36 T 11-10-2018 Tbd_1625 71f87373e23574282c4418cc51040252 120 SMART SM00448 2 115 9.0E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_0634 9139dba5e8415b1d150d302e9ea462a4 268 Gene3D G3DSA:2.50.20.10 24 258 3.0E-61 T 11-10-2018 Tbd_0634 9139dba5e8415b1d150d302e9ea462a4 268 Pfam PF17131 Outer membrane lipoprotein-sorting protein 75 258 1.5E-51 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 PIRSF PIRSF002756 5 341 9.8E-103 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 Pfam PF12849 PBP superfamily domain 31 312 4.3E-58 T 11-10-2018 IPR024370 PBP domain Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 SUPERFAMILY SSF53850 32 340 3.6E-91 T 11-10-2018 Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 Gene3D G3DSA:3.40.190.10 106 283 2.1E-114 T 11-10-2018 Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 Gene3D G3DSA:3.40.190.10 32 330 2.1E-114 T 11-10-2018 Tbd_1420 529a99f6af6ad0a9eb774a8e9d95a979 341 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 32 340 1.5E-116 T 11-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 SUPERFAMILY SSF52540 24 252 2.16E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Gene3D G3DSA:1.10.8.60 186 259 3.5E-29 T 11-10-2018 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 331 1.3E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Gene3D G3DSA:3.40.50.300 24 185 2.5E-40 T 11-10-2018 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 341 184.513 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 SMART SM00382 55 182 4.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Gene3D G3DSA:1.10.10.10 261 339 1.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2211 89d98720c0f771871f0887ce842d4013 341 SUPERFAMILY SSF46785 261 334 6.8E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2211 89d98720c0f771871f0887ce842d4013 341 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 261 332 2.0E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 8.6E-146 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tbd_2211 89d98720c0f771871f0887ce842d4013 341 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 2.2E-118 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Tbd_1973 d90f6e541fbf5a4a5c6e396b5219195b 71 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 64 2.5E-10 T 11-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Tbd_1973 d90f6e541fbf5a4a5c6e396b5219195b 71 Gene3D G3DSA:3.30.160.250 4 70 4.1E-16 T 11-10-2018 Tbd_1973 d90f6e541fbf5a4a5c6e396b5219195b 71 SUPERFAMILY SSF143100 4 66 1.96E-20 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like Tbd_1036 770f27923599123807e7a2bd126084e7 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 3.1E-21 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tbd_1036 770f27923599123807e7a2bd126084e7 124 TIGRFAM TIGR00494 crcB: protein CrcB 5 117 1.7E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tbd_1036 770f27923599123807e7a2bd126084e7 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 17.744 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tbd_1505 b8705e0270ad529e9ffec89eedad634d 252 SUPERFAMILY SSF53448 4 249 4.69E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1505 b8705e0270ad529e9ffec89eedad634d 252 Gene3D G3DSA:3.90.550.10 1 250 2.7E-92 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1505 b8705e0270ad529e9ffec89eedad634d 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 242 1.5E-89 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Tbd_1505 b8705e0270ad529e9ffec89eedad634d 252 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 250 42.818 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Tbd_1505 b8705e0270ad529e9ffec89eedad634d 252 Pfam PF02348 Cytidylyltransferase 5 223 3.8E-53 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 Pfam PF00563 EAL domain 417 651 2.7E-69 T 11-10-2018 IPR001633 EAL domain Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 SMART SM00052 410 656 1.2E-102 T 11-10-2018 IPR001633 EAL domain Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 Gene3D G3DSA:3.20.20.450 414 665 1.1E-94 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 Gene3D G3DSA:3.30.70.270 234 413 4.9E-60 T 11-10-2018 Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 SUPERFAMILY SSF141868 415 663 4.45E-83 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 399 2.1E-42 T 11-10-2018 IPR000160 GGDEF domain Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 SMART SM00267 228 400 7.2E-61 T 11-10-2018 IPR000160 GGDEF domain Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 396 4.5E-48 T 11-10-2018 IPR000160 GGDEF domain Tbd_0616 9eb3266d10f107c1d352e05b8d531b4a 674 SUPERFAMILY SSF55073 244 401 1.96E-50 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_2303 79dab19cadff6c770582979e94586427 271 PIRSF PIRSF003092 1 271 2.0E-87 T 11-10-2018 IPR025501 ATP binding protein MinD Tbd_2303 79dab19cadff6c770582979e94586427 271 SUPERFAMILY SSF52540 3 269 1.53E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2303 79dab19cadff6c770582979e94586427 271 Pfam PF13614 AAA domain 3 165 2.7E-20 T 11-10-2018 IPR025669 AAA domain Tbd_2303 79dab19cadff6c770582979e94586427 271 Gene3D G3DSA:3.40.50.300 2 260 7.2E-71 T 11-10-2018 Tbd_2303 79dab19cadff6c770582979e94586427 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 2.1E-101 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 Pfam PF00483 Nucleotidyl transferase 30 294 8.9E-64 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 28 400 2.7E-151 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 25 426 50.304 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 34 53 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 Gene3D G3DSA:2.160.10.10 309 432 6.1E-37 T 11-10-2018 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 Gene3D G3DSA:3.90.550.10 16 308 3.0E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 219 229 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 121 129 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 SUPERFAMILY SSF51161 314 418 1.8E-16 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_2061 113fe47a786b2220a06cb167c0e35d73 439 SUPERFAMILY SSF53448 25 381 7.21E-80 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1316 a3c07bb28863584126472b3e86151ec2 300 SUPERFAMILY SSF52540 55 235 2.66E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1316 a3c07bb28863584126472b3e86151ec2 300 Gene3D G3DSA:3.40.50.300 44 197 3.1E-6 T 11-10-2018 Tbd_0454 c0742b717266fd5d3757298dfe17a9ac 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Tbd_0454 c0742b717266fd5d3757298dfe17a9ac 130 Gene3D G3DSA:3.30.230.10 1 130 9.9E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0454 c0742b717266fd5d3757298dfe17a9ac 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.4E-44 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Tbd_0454 c0742b717266fd5d3757298dfe17a9ac 130 SUPERFAMILY SSF54211 5 130 6.07E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0454 c0742b717266fd5d3757298dfe17a9ac 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.516 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Tbd_2124 42954a02a04bd8d128fab8fcfbfaed8e 215 Pfam PF01914 MarC family integral membrane protein 10 209 2.9E-51 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Tbd_2124 42954a02a04bd8d128fab8fcfbfaed8e 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 10 206 7.6E-54 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Gene3D G3DSA:2.120.10.90 532 843 2.2E-127 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 SUPERFAMILY SSF56719 30 523 7.19E-179 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 843 24.387 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 795 841 8.2E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 739 1.4E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 687 8.6E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 792 5.3E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 639 3.3E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 586 1.9E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 SMART SM00434 11 500 2.0E-284 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 5.9E-154 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 842 0.0 T 11-10-2018 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Gene3D G3DSA:3.30.1360.40 236 334 1.9E-224 T 11-10-2018 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Gene3D G3DSA:1.10.268.10 371 494 1.9E-224 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 SUPERFAMILY SSF101904 534 848 8.89E-113 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tbd_0948 87d5b3c65ba391315856ef5d00c44ba8 849 Gene3D G3DSA:3.90.199.10 33 522 1.9E-224 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 Gene3D G3DSA:1.10.357.140 22 169 7.0E-40 T 11-10-2018 Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 29.026 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 Gene3D G3DSA:1.20.120.1780 170 290 1.4E-10 T 11-10-2018 Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 Pfam PF01040 UbiA prenyltransferase family 25 268 1.3E-60 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Tbd_0463 8c3e67d866167e8d8b79a7e3e08b255f 293 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 284 1.4E-99 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 Gene3D G3DSA:1.10.10.2830 105 218 2.4E-35 T 11-10-2018 Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 SUPERFAMILY SSF110849 29 120 4.45E-28 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 28 202 3.7E-59 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 SMART SM00470 29 118 7.4E-36 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 Pfam PF02195 ParB-like nuclease domain 31 118 1.3E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 Gene3D G3DSA:3.90.1530.30 42 104 2.8E-28 T 11-10-2018 Tbd_2805 2d9b2ac497ba071b2e7ad36c873dfdb2 284 SUPERFAMILY SSF109709 111 220 2.48E-34 T 11-10-2018 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PIRSF PIRSF000722 42 358 4.8E-91 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PIRSF PIRSF000722 4 42 0.012 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 Gene3D G3DSA:3.30.420.40 165 358 7.3E-52 T 11-10-2018 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 SUPERFAMILY SSF53067 7 163 3.11E-42 T 11-10-2018 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 SUPERFAMILY SSF53067 129 357 4.0E-56 T 11-10-2018 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 Hamap MF_00020 Acetate kinase [ackA]. 1 358 105.046 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PRINTS PR00471 Acetate kinase family signature 285 301 3.3E-23 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PRINTS PR00471 Acetate kinase family signature 263 276 3.3E-23 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PRINTS PR00471 Acetate kinase family signature 336 348 3.3E-23 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PRINTS PR00471 Acetate kinase family signature 170 191 3.3E-23 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 PRINTS PR00471 Acetate kinase family signature 8 19 3.3E-23 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 Gene3D G3DSA:3.30.420.40 2 163 1.6E-43 T 11-10-2018 Tbd_0832 f54d01c37fd2455a2a77b955287d6d58 363 Pfam PF00871 Acetokinase family 58 347 6.2E-69 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tbd_1232 c368ae0686f6b88410935410ab0b0b94 639 SMART SM00763 18 375 5.0E-217 T 11-10-2018 IPR013153 PrkA AAA domain Tbd_1232 c368ae0686f6b88410935410ab0b0b94 639 Pfam PF08298 PrkA AAA domain 19 375 6.7E-175 T 11-10-2018 IPR013153 PrkA AAA domain Tbd_1232 c368ae0686f6b88410935410ab0b0b94 639 Pfam PF06798 PrkA serine protein kinase C-terminal domain 378 631 1.1E-70 T 11-10-2018 IPR010650 PrkA C-terminal domain Tbd_1232 c368ae0686f6b88410935410ab0b0b94 639 PIRSF PIRSF000549 1 639 4.9E-290 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Tbd_1232 c368ae0686f6b88410935410ab0b0b94 639 SUPERFAMILY SSF52540 74 349 4.83E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 Gene3D G3DSA:2.60.120.10 2 148 3.8E-41 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 Gene3D G3DSA:1.10.10.10 149 224 8.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 SUPERFAMILY SSF46785 149 221 4.94E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 8.9E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 1.3E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 SMART SM00100 16 134 3.4E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 SUPERFAMILY SSF51206 10 148 1.15E-33 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Tbd_0079 9b51a1d8bf603200ef15b7e84b0c239d 225 SMART SM00419 169 217 1.3E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tbd_0406 fa8682f241f2e0e97da9d51a2826db72 205 Gene3D G3DSA:3.40.1370.10 3 205 9.3E-64 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0406 fa8682f241f2e0e97da9d51a2826db72 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 205 29.845 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0406 fa8682f241f2e0e97da9d51a2826db72 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 7.5E-66 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0406 fa8682f241f2e0e97da9d51a2826db72 205 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 8.7E-60 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Tbd_0406 fa8682f241f2e0e97da9d51a2826db72 205 SUPERFAMILY SSF52166 1 204 1.57E-67 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 SUPERFAMILY SSF46785 1 85 1.07E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 SUPERFAMILY SSF55781 71 337 2.75E-60 T 11-10-2018 Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 Gene3D G3DSA:3.30.450.40 104 334 1.4E-35 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 Gene3D G3DSA:3.30.390.60 126 225 1.4E-35 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 328 27.525 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 Gene3D G3DSA:1.10.10.10 1 83 5.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 334 2.7E-94 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 PIRSF PIRSF005485 1 339 3.7E-106 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tbd_2032 286f1c7a5d3c1db6c83c4a0c24e04126 339 Pfam PF01628 HrcA protein C terminal domain 103 321 1.1E-56 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Tbd_0650 da611d30bb342ad6ce22ac5db9d047dd 146 Pfam PF04214 Protein of unknown function, DUF 52 120 9.6E-34 T 11-10-2018 IPR007332 Protein of unknown function DUF411 Tbd_0650 da611d30bb342ad6ce22ac5db9d047dd 146 SUPERFAMILY SSF52833 6 100 2.84E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 SMART SM00926 43 105 1.0E-5 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 SUPERFAMILY SSF53706 4 1064 0.0 T 11-10-2018 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 Pfam PF01568 Molydopterin dinucleotide binding domain 1084 1196 1.4E-21 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 Pfam PF00384 Molybdopterin oxidoreductase 108 827 1.0E-140 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1233 0.0 T 11-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 Gene3D G3DSA:3.40.50.12440 44 1243 0.0 T 11-10-2018 Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 SUPERFAMILY SSF50692 1078 1230 1.22E-43 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tbd_1403 6bdbbe39d878a2a8356077f12e5190ff 1252 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.5E-18 T 11-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 191 6.3E-37 T 11-10-2018 Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 Gene3D G3DSA:3.40.50.1000 4 217 3.6E-73 T 11-10-2018 IPR023214 HAD superfamily Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 203 1.4E-37 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 SUPERFAMILY SSF56784 1 213 8.83E-30 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 Gene3D G3DSA:1.20.1440.100 15 88 3.6E-73 T 11-10-2018 Tbd_2011 cfe81d5aceb722544bceea98730ec085 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 193 4.8E-20 T 11-10-2018 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 Pfam PF00464 Serine hydroxymethyltransferase 8 383 8.7E-172 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 Gene3D G3DSA:3.90.1150.10 10 392 3.4E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 Gene3D G3DSA:3.40.640.10 37 286 3.4E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 52.145 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 SUPERFAMILY SSF53383 6 414 1.79E-180 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2165 52fc4e0315300724b676a01ab48dcff9 414 PIRSF PIRSF000412 1 414 4.9E-168 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 Gene3D G3DSA:3.40.50.720 6 259 2.6E-105 T 11-10-2018 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 Gene3D G3DSA:3.40.50.10860 8 276 2.6E-105 T 11-10-2018 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.175 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.5E-66 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 SUPERFAMILY SSF53223 1 122 2.3E-39 T 11-10-2018 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 SUPERFAMILY SSF51735 123 281 3.14E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.3E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0689 af88c2cb6c8cfc0ad2e2e256ba4ea3b1 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.7E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tbd_0354 1ad21c1b65764d0f44415f385adae12f 555 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 201 518 1.3E-18 T 11-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal Tbd_0354 1ad21c1b65764d0f44415f385adae12f 555 Gene3D G3DSA:2.40.160.50 175 553 2.2E-62 T 11-10-2018 Tbd_0354 1ad21c1b65764d0f44415f385adae12f 555 Pfam PF08479 POTRA domain, ShlB-type 64 138 2.8E-14 T 11-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type Tbd_0354 1ad21c1b65764d0f44415f385adae12f 555 Gene3D G3DSA:3.10.20.310 48 138 1.5E-11 T 11-10-2018 Tbd_2207 6396c37aaf6e48f4fa0b42904c5522d8 290 SUPERFAMILY SSF74653 199 277 1.57E-14 T 11-10-2018 Tbd_2207 6396c37aaf6e48f4fa0b42904c5522d8 290 Gene3D G3DSA:3.30.1150.10 170 290 2.7E-23 T 11-10-2018 Tbd_2207 6396c37aaf6e48f4fa0b42904c5522d8 290 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 225 279 2.5E-9 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Tbd_2207 6396c37aaf6e48f4fa0b42904c5522d8 290 Pfam PF13103 TonB C terminal 206 275 3.1E-17 T 11-10-2018 Tbd_2200 5b94faa6fcc0ccf8d510e352483cc29f 111 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_2200 5b94faa6fcc0ccf8d510e352483cc29f 111 SUPERFAMILY SSF54523 8 87 1.78E-22 T 11-10-2018 Tbd_2200 5b94faa6fcc0ccf8d510e352483cc29f 111 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.2E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_2200 5b94faa6fcc0ccf8d510e352483cc29f 111 Gene3D G3DSA:3.30.700.10 8 111 4.4E-25 T 11-10-2018 Tbd_2200 5b94faa6fcc0ccf8d510e352483cc29f 111 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.1E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 Gene3D G3DSA:3.90.470.20 1 125 5.0E-34 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 SUPERFAMILY SSF56214 1 124 5.36E-26 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 2.0E-16 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 21.713 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 6.5E-21 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 126 8.0E-29 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tbd_0728 1605fb7d18373f00e3050498ca2a1e60 131 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 92 6.0E-33 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 Pfam PF00005 ABC transporter 19 165 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 SUPERFAMILY SSF52540 1 218 5.2E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 Gene3D G3DSA:3.40.50.300 1 220 2.9E-65 T 11-10-2018 Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 SMART SM00382 27 214 1.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0375 0501e855e96806d3ec352342f8b9eccc 220 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.7E-80 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Tbd_2031 09d3d0c69236014bbf1424faadfca267 290 Hamap MF_00361 NAD kinase [nadK]. 6 286 33.959 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tbd_2031 09d3d0c69236014bbf1424faadfca267 290 Pfam PF01513 ATP-NAD kinase 55 267 5.3E-58 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tbd_2031 09d3d0c69236014bbf1424faadfca267 290 Gene3D G3DSA:2.60.200.30 128 263 5.3E-95 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tbd_2031 09d3d0c69236014bbf1424faadfca267 290 SUPERFAMILY SSF111331 7 288 1.96E-89 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tbd_2031 09d3d0c69236014bbf1424faadfca267 290 Gene3D G3DSA:3.40.50.10330 24 286 5.3E-95 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tbd_1507 8c4c6bce3d02056afce1a2d0619c8a8b 369 Gene3D G3DSA:3.30.70.270 187 355 8.0E-42 T 11-10-2018 Tbd_1507 8c4c6bce3d02056afce1a2d0619c8a8b 369 SMART SM00267 189 353 8.9E-33 T 11-10-2018 IPR000160 GGDEF domain Tbd_1507 8c4c6bce3d02056afce1a2d0619c8a8b 369 Pfam PF00990 Diguanylate cyclase, GGDEF domain 201 348 3.1E-32 T 11-10-2018 IPR000160 GGDEF domain Tbd_1507 8c4c6bce3d02056afce1a2d0619c8a8b 369 SUPERFAMILY SSF55073 205 349 8.37E-35 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1507 8c4c6bce3d02056afce1a2d0619c8a8b 369 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 197 349 1.7E-32 T 11-10-2018 IPR000160 GGDEF domain Tbd_2433 7103f444dc334bd2c36b120337c2bf7f 701 Pfam PF01432 Peptidase family M3 231 699 2.2E-139 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Tbd_2433 7103f444dc334bd2c36b120337c2bf7f 701 SUPERFAMILY SSF55486 11 699 1.57E-187 T 11-10-2018 Tbd_2433 7103f444dc334bd2c36b120337c2bf7f 701 Gene3D G3DSA:1.10.1370.10 149 627 6.9E-253 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Tbd_2433 7103f444dc334bd2c36b120337c2bf7f 701 Gene3D G3DSA:1.10.1370.40 22 698 6.9E-253 T 11-10-2018 Tbd_0203 058f10c673dfcbaaf146e908afdecbb9 191 Pfam PF05137 Fimbrial assembly protein (PilN) 100 176 9.9E-23 T 11-10-2018 IPR007813 Fimbrial assembly PilN Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 522 540 3.1E-11 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 309 319 3.1E-11 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 545 559 3.1E-11 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 PRINTS PR00811 Bacterial general secretion pathway protein D signature 375 399 3.1E-11 T 11-10-2018 IPR001775 GspD/PilQ family Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 Gene3D G3DSA:3.55.50.30 62 141 2.1E-8 T 11-10-2018 Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 SMART SM00965 92 140 5.4E-4 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Tbd_0549 a679ddd8ab5e102a15dd68c913c5f42e 581 Pfam PF00263 Bacterial type II and III secretion system protein 380 557 1.5E-38 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 4.2E-32 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 Gene3D G3DSA:3.40.50.720 1 161 4.1E-55 T 11-10-2018 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 SUPERFAMILY SSF51735 1 162 1.04E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 6.7E-50 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 PIRSF PIRSF000103 1 291 1.6E-77 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 Gene3D G3DSA:1.10.1040.10 162 290 8.7E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 SUPERFAMILY SSF48179 162 286 2.61E-35 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_0081 b4d3e4b5eaf54c892dc19612a1f6e941 292 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 2 289 5.2E-110 T 11-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 Pfam PF01594 AI-2E family transporter 14 335 4.1E-56 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 385 659 6.7E-81 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 SUPERFAMILY SSF56104 375 663 1.5E-102 T 11-10-2018 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 382 662 26.834 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 ProSitePatterns PS01058 SAICAR synthetase signature 2. 574 582 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 Gene3D G3DSA:3.30.200.20 374 473 1.1E-32 T 11-10-2018 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 Pfam PF01259 SAICAR synthetase 385 637 2.0E-104 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tbd_2668 1327404e62a6685aefd048eafe2c32da 665 Gene3D G3DSA:3.30.470.20 474 618 1.6E-60 T 11-10-2018 Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 SMART SM00796 56 246 3.9E-55 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 61 246 8.4E-54 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 Gene3D G3DSA:3.30.1360.40 58 129 5.5E-6 T 11-10-2018 Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 90 255 9.8E-46 T 11-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 SUPERFAMILY SSF50891 133 256 1.33E-38 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_2813 c774e2619a0dc063f7d2e2fda2292ada 257 Gene3D G3DSA:2.40.100.10 132 257 1.3E-45 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 SUPERFAMILY SSF54862 1 102 4.79E-24 T 11-10-2018 Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 Gene3D G3DSA:3.30.70.20 2 99 4.2E-31 T 11-10-2018 Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 Pfam PF00037 4Fe-4S binding domain 35 56 4.3E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.6E-20 T 11-10-2018 IPR022569 Ferredoxin, C-terminal Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.2E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.2E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Tbd_0035 1bdc81a5a956c60aac2cf2e34608ec1e 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.2E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 SMART SM00418 55 135 3.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 107 122 4.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 92 107 4.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 Gene3D G3DSA:1.10.10.10 46 140 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 SUPERFAMILY SSF46785 40 140 5.36E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1424 9887ab39fd8f8aef73ce7f484c160d20 158 Pfam PF12840 Helix-turn-helix domain 56 116 1.6E-11 T 11-10-2018 Tbd_0296 ad4e6d1a3204f9d6a29940bda0059ae4 365 SUPERFAMILY SSF48208 37 310 1.87E-13 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 SUPERFAMILY SSF55120 1 252 3.31E-83 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 Gene3D G3DSA:3.30.70.580 1 105 4.9E-33 T 11-10-2018 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 PIRSF PIRSF001430 1 259 1.6E-70 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 Pfam PF01416 tRNA pseudouridine synthase 10 103 8.3E-6 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 Pfam PF01416 tRNA pseudouridine synthase 143 245 3.2E-28 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 31.99 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 Gene3D G3DSA:3.30.70.660 107 243 9.9E-45 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Tbd_1916 c0fc5e9094fe675f743f31f426c064b0 260 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 7.6E-61 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Gene3D G3DSA:1.10.730.20 647 920 1.9E-86 T 11-10-2018 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 846 6.5E-270 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 5.7E-203 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Gene3D G3DSA:3.40.50.620 25 636 6.0E-230 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 SUPERFAMILY SSF52374 3 656 2.35E-139 T 11-10-2018 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Pfam PF08264 Anticodon-binding domain of tRNA 692 845 9.6E-22 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Gene3D G3DSA:3.90.740.10 192 405 6.0E-230 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 1.9E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 534 547 1.9E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 577 1.9E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 1.9E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 398 413 1.9E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 920 21.173 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 SUPERFAMILY SSF47323 659 919 4.3E-67 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 SUPERFAMILY SSF50677 201 400 6.7E-55 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tbd_1857 51e610a4154d8d8eea70e270b143fa2a 929 Pfam PF06827 Zinc finger found in FPG and IleRS 890 917 3.0E-6 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Tbd_1544 2f8fdd07286c88402c25898a0de2bb2e 333 Pfam PF02618 YceG-like family 44 329 1.2E-77 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Tbd_1544 2f8fdd07286c88402c25898a0de2bb2e 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 35 332 4.2E-81 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Tbd_1544 2f8fdd07286c88402c25898a0de2bb2e 333 Gene3D G3DSA:3.30.160.60 305 333 1.3E-10 T 11-10-2018 Tbd_1544 2f8fdd07286c88402c25898a0de2bb2e 333 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 15 333 33.176 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Tbd_1544 2f8fdd07286c88402c25898a0de2bb2e 333 Gene3D G3DSA:1.10.8.1150 41 114 1.7E-6 T 11-10-2018 Tbd_0864 f04d030a831dab370eee2602ac7246bc 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.212 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0864 f04d030a831dab370eee2602ac7246bc 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.7E-43 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0864 f04d030a831dab370eee2602ac7246bc 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.8E-38 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0864 f04d030a831dab370eee2602ac7246bc 103 SUPERFAMILY SSF141091 1 102 1.05E-39 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0864 f04d030a831dab370eee2602ac7246bc 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SMART SM00387 319 428 5.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SUPERFAMILY SSF158472 172 222 2.62E-7 T 11-10-2018 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 Pfam PF00672 HAMP domain 172 220 9.3E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 423 4.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SUPERFAMILY SSF55874 277 426 7.99E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 8.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SMART SM00304 172 224 8.0E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SUPERFAMILY SSF47384 208 283 4.51E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 Gene3D G3DSA:3.30.565.10 304 428 8.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 SMART SM00388 225 286 5.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 Gene3D G3DSA:1.10.287.130 176 288 1.4E-23 T 11-10-2018 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2353 f27d97b19508bf82f2e0cc9def54d521 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_0531 95064ae8516b53c89e61567a004bf7c6 151 SUPERFAMILY SSF55804 4 148 5.36E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Tbd_0531 95064ae8516b53c89e61567a004bf7c6 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain Tbd_0531 95064ae8516b53c89e61567a004bf7c6 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 1.8E-32 T 11-10-2018 IPR002178 PTS EIIA type-2 domain Tbd_0531 95064ae8516b53c89e61567a004bf7c6 151 Gene3D G3DSA:3.40.930.10 1 150 9.9E-47 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 PRINTS PR00160 Glutaredoxin signature 61 74 1.3E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 PRINTS PR00160 Glutaredoxin signature 47 60 1.3E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 PRINTS PR00160 Glutaredoxin signature 4 22 1.3E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 Pfam PF00462 Glutaredoxin 4 64 1.6E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 Gene3D G3DSA:3.40.30.10 1 83 8.4E-23 T 11-10-2018 Tbd_1126 d54da7fa75d207f7611652dcfb433cc4 92 SUPERFAMILY SSF52833 1 81 5.62E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.041 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 Pfam PF00137 ATP synthase subunit C 10 71 1.1E-8 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 PRINTS PR00124 ATP synthase C subunit signature 32 47 6.1E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 PRINTS PR00124 ATP synthase C subunit signature 11 30 6.1E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 PRINTS PR00124 ATP synthase C subunit signature 49 74 6.1E-11 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 5.7E-29 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 SUPERFAMILY SSF81333 2 76 2.75E-17 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tbd_2802 9f093a1acd15ba0d85b39bca945acc44 79 Gene3D G3DSA:1.20.20.10 1 78 2.1E-29 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tbd_2727 1297917693d08983f8623070dd6753d1 673 Gene3D G3DSA:3.40.30.10 1 172 1.1E-66 T 11-10-2018 Tbd_2727 1297917693d08983f8623070dd6753d1 673 SUPERFAMILY SSF52833 1 130 1.25E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2727 1297917693d08983f8623070dd6753d1 673 PIRSF PIRSF006402 1 673 5.5E-222 T 11-10-2018 IPR024705 Spermatogenesis-associated protein 20 Tbd_2727 1297917693d08983f8623070dd6753d1 673 SUPERFAMILY SSF48208 192 541 2.49E-69 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tbd_2727 1297917693d08983f8623070dd6753d1 673 Pfam PF03190 Protein of unknown function, DUF255 3 164 4.1E-74 T 11-10-2018 IPR004879 Domain of unknown function DUF255 Tbd_2727 1297917693d08983f8623070dd6753d1 673 Gene3D G3DSA:1.50.10.10 399 607 1.7E-8 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tbd_0248 fe5296dd68be2bbf5b636c0e3441170c 255 SUPERFAMILY SSF52540 4 232 3.55E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0248 fe5296dd68be2bbf5b636c0e3441170c 255 Gene3D G3DSA:3.40.50.300 3 251 1.1E-67 T 11-10-2018 Tbd_0248 fe5296dd68be2bbf5b636c0e3441170c 255 Pfam PF00005 ABC transporter 23 171 1.4E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0248 fe5296dd68be2bbf5b636c0e3441170c 255 SMART SM00382 30 220 4.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0248 fe5296dd68be2bbf5b636c0e3441170c 255 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_0103 c056717910fa33814e0c15cdc05d513b 186 SUPERFAMILY SSF53271 10 175 7.21E-25 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_0103 c056717910fa33814e0c15cdc05d513b 186 Gene3D G3DSA:3.40.50.2020 3 184 5.7E-32 T 11-10-2018 Tbd_0103 c056717910fa33814e0c15cdc05d513b 186 Pfam PF00156 Phosphoribosyl transferase domain 15 173 8.3E-29 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 48 477 7.8E-88 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 376 390 7.5E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 77 96 7.5E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 361 375 7.5E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 303 325 7.5E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 438 451 7.5E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 65 460 5.4E-60 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 SUPERFAMILY SSF56601 35 480 4.3E-88 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 Gene3D G3DSA:3.50.80.20 106 168 1.4E-16 T 11-10-2018 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 Gene3D G3DSA:3.40.710.10 290 480 2.3E-56 T 11-10-2018 Tbd_0101 f987bd63b2d0547884a844c39c1e5132 488 Gene3D G3DSA:3.40.710.10 45 105 8.4E-10 T 11-10-2018 Tbd_2337 1264a2d5f81d57bf928b0a38a7ee0ae6 728 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 702 19.779 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Tbd_2337 1264a2d5f81d57bf928b0a38a7ee0ae6 728 Pfam PF04453 Organic solvent tolerance protein 282 642 9.2E-90 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Tbd_1047 d5f92e2187b210e6e3c4a36448289e10 389 Gene3D G3DSA:3.40.50.150 122 383 7.8E-96 T 11-10-2018 Tbd_1047 d5f92e2187b210e6e3c4a36448289e10 389 PIRSF PIRSF003085 14 388 1.3E-115 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Tbd_1047 d5f92e2187b210e6e3c4a36448289e10 389 SUPERFAMILY SSF53335 123 379 1.36E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1047 d5f92e2187b210e6e3c4a36448289e10 389 Pfam PF02353 Mycolic acid cyclopropane synthetase 114 374 3.7E-92 T 11-10-2018 Tbd_1092 d77928080a9513c94978974dc10271d9 149 Pfam PF02050 Flagellar FliJ protein 19 137 9.8E-16 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tbd_2687 8c793054634a2d7ce921c8e50a72ebcf 149 Pfam PF04314 Copper chaperone PCu(A)C 25 128 7.3E-36 T 11-10-2018 IPR007410 Copper chaperone PCuAC Tbd_2687 8c793054634a2d7ce921c8e50a72ebcf 149 Gene3D G3DSA:2.60.40.1890 28 141 1.3E-36 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Tbd_2687 8c793054634a2d7ce921c8e50a72ebcf 149 SUPERFAMILY SSF110087 3 140 1.96E-45 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 223 1.2E-95 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 193 207 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 172 183 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 86 103 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 36 45 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 5 23 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 PRINTS PR00395 Ribosomal protein S2 signature 155 172 2.9E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 Gene3D G3DSA:1.10.287.610 102 147 5.2E-82 T 11-10-2018 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 SUPERFAMILY SSF52313 5 228 6.28E-87 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 Gene3D G3DSA:3.40.50.10490 7 216 5.2E-82 T 11-10-2018 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 222 39.467 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0785 e4472b3c1f702017c553f79e02e60db8 248 Pfam PF00318 Ribosomal protein S2 8 221 9.1E-88 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2622 fafe36bda2a66b939351e1ab8498007a 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 264 6.8E-33 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Tbd_2622 fafe36bda2a66b939351e1ab8498007a 267 Gene3D G3DSA:3.40.50.300 20 187 2.4E-29 T 11-10-2018 Tbd_2622 fafe36bda2a66b939351e1ab8498007a 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 2.0E-32 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_2622 fafe36bda2a66b939351e1ab8498007a 267 SUPERFAMILY SSF52540 20 224 8.76E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0443 3632f4a21a620064f754f9104d2ae77c 101 PIRSF PIRSF019302 1 101 2.1E-34 T 11-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 Tbd_0443 3632f4a21a620064f754f9104d2ae77c 101 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 3 98 1.1E-33 T 11-10-2018 IPR016755 Uncharacterised conserved protein UCP019302 Tbd_2264 f40fbd819fba719b19d851bdcc47f3e3 141 Gene3D G3DSA:3.30.70.3200 2 89 4.6E-16 T 11-10-2018 Tbd_2264 f40fbd819fba719b19d851bdcc47f3e3 141 SUPERFAMILY SSF54975 3 84 3.11E-19 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tbd_2264 f40fbd819fba719b19d851bdcc47f3e3 141 Pfam PF04940 Sensors of blue-light using FAD 6 83 6.3E-13 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Tbd_2264 f40fbd819fba719b19d851bdcc47f3e3 141 SMART SM01034 5 91 1.7E-7 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Tbd_0928 29ae53872f69ad7425a43cea760ae67a 239 Gene3D G3DSA:3.30.420.10 74 232 1.8E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0928 29ae53872f69ad7425a43cea760ae67a 239 Pfam PF00665 Integrase core domain 78 191 4.5E-33 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tbd_0928 29ae53872f69ad7425a43cea760ae67a 239 Pfam PF13276 HTH-like domain 1 49 1.9E-13 T 11-10-2018 IPR025948 HTH-like domain Tbd_0928 29ae53872f69ad7425a43cea760ae67a 239 SUPERFAMILY SSF53098 72 234 1.9E-40 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 Hamap MF_00268 Protein RecA [recA]. 25 350 52.56 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 SMART SM00382 78 249 7.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 SUPERFAMILY SSF52540 23 288 7.58E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 24 344 9.7E-174 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 ProSitePatterns PS00321 recA signature. 234 242 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 Pfam PF00154 recA bacterial DNA recombination protein 27 289 1.1E-147 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 Gene3D G3DSA:3.40.50.300 47 289 2.0E-84 T 11-10-2018 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 231 259 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 318 335 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 186 215 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 264 293 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 114 143 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 PRINTS PR00142 RecA protein signature 148 177 1.4E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 SUPERFAMILY SSF54752 289 347 5.89E-22 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tbd_2197 de54154f1d5b2a8021ca8588e4b14ad5 364 Gene3D G3DSA:3.30.250.10 290 364 1.3E-28 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 604 48.586 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 582 6.6E-75 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 SUPERFAMILY SSF82866 399 597 3.27E-41 T 11-10-2018 Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Gene3D G3DSA:1.20.1640.10 422 597 1.1E-5 T 11-10-2018 Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 589 8.1E-146 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Pfam PF07549 SecD/SecF GG Motif 120 141 1.9E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Gene3D G3DSA:3.30.70.3400 222 421 2.3E-56 T 11-10-2018 Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Pfam PF02355 Protein export membrane protein 422 590 1.5E-16 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Pfam PF13721 SecD export protein N-terminal TM region 1 103 2.0E-35 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain Tbd_2079 fc1f4d5208957a175f64c675e637f1c7 604 Gene3D G3DSA:3.30.1360.200 280 420 2.3E-56 T 11-10-2018 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 Pfam PF02119 Flagellar P-ring protein 22 364 3.5E-139 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 22 37 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 162 180 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 188 206 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 57 72 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 83 102 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 122 140 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 37 52 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 252 264 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 PRINTS PR01010 Flagellar P-ring protein signature 105 122 2.5E-83 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_1630 15b47bffe2e51359de4c5b302db0193e 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 365 38.244 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Tbd_0311 e373a86bdb53a64172b99a60d9f42e37 488 Pfam PF13440 Polysaccharide biosynthesis protein 31 322 6.2E-70 T 11-10-2018 Tbd_0311 e373a86bdb53a64172b99a60d9f42e37 488 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 325 463 6.2E-9 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 Gene3D G3DSA:1.10.1660.10 3 130 1.3E-31 T 11-10-2018 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 SUPERFAMILY SSF46955 8 121 7.33E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 4.3E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 4.3E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 4.3E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 SMART SM00422 8 77 1.8E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 10 132 1.1E-50 T 11-10-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 Tbd_1338 26f8b96c17df7f52198f37c32297d0e7 135 Pfam PF13411 MerR HTH family regulatory protein 9 75 2.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 299 8.5E-110 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 2.7E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 2.7E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 2.7E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 2.7E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 300 76.12 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 Gene3D G3DSA:3.40.50.1370 133 286 9.0E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 7.2E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 7.2E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 7.2E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 7.2E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 7.2E-28 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 SUPERFAMILY SSF53671 2 299 6.55E-103 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 Gene3D G3DSA:3.40.50.1370 4 296 9.0E-113 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 143 2.2E-48 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 1.6E-48 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tbd_1850 8c2ae9f0d1d920630f563bbcc4494c23 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 SUPERFAMILY SSF52317 266 457 3.16E-38 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 18 490 8.6E-145 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 SUPERFAMILY SSF52540 17 252 3.47E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 265 447 4.5E-55 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 498 206.045 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 Pfam PF13500 AAA domain 17 243 6.8E-21 T 11-10-2018 Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 Gene3D G3DSA:3.40.50.880 266 407 6.7E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_2714 4fe50e030ff49f67b58126b890f25fc6 500 Gene3D G3DSA:3.40.50.300 16 248 5.1E-54 T 11-10-2018 Tbd_2169 7c183090991ac65a7ca470e0a34a4f0e 248 Gene3D G3DSA:3.40.50.150 19 244 5.4E-86 T 11-10-2018 Tbd_2169 7c183090991ac65a7ca470e0a34a4f0e 248 SUPERFAMILY SSF53335 5 178 2.48E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2169 7c183090991ac65a7ca470e0a34a4f0e 248 Pfam PF08241 Methyltransferase domain 42 129 5.4E-15 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_2169 7c183090991ac65a7ca470e0a34a4f0e 248 Gene3D G3DSA:1.10.10.2560 135 234 5.4E-86 T 11-10-2018 Tbd_2077 27550e909f9d198487cae71638d3304d 336 Gene3D G3DSA:3.30.2010.10 153 240 6.9E-7 T 11-10-2018 Tbd_2077 27550e909f9d198487cae71638d3304d 336 Pfam PF01435 Peptidase family M48 160 326 1.1E-20 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_2551 32760d06044e8c4f3d4b66ca82b5cbff 121 SUPERFAMILY SSF52172 5 120 1.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_2551 32760d06044e8c4f3d4b66ca82b5cbff 121 SMART SM00448 4 117 1.6E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2551 32760d06044e8c4f3d4b66ca82b5cbff 121 Pfam PF00072 Response regulator receiver domain 6 117 5.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tbd_2551 32760d06044e8c4f3d4b66ca82b5cbff 121 Gene3D G3DSA:3.40.50.12740 4 121 1.1E-44 T 11-10-2018 Tbd_0812 caa45d2453c976808c478613e1d49672 306 Gene3D G3DSA:2.40.50.140 224 306 2.8E-7 T 11-10-2018 Tbd_0812 caa45d2453c976808c478613e1d49672 306 Pfam PF14743 DNA ligase OB-like domain 238 303 2.5E-29 T 11-10-2018 IPR029319 DNA ligase, OB-like domain Tbd_0812 caa45d2453c976808c478613e1d49672 306 SUPERFAMILY SSF56091 53 224 2.04E-34 T 11-10-2018 Tbd_0812 caa45d2453c976808c478613e1d49672 306 Gene3D G3DSA:3.30.1490.70 57 216 2.6E-49 T 11-10-2018 Tbd_0812 caa45d2453c976808c478613e1d49672 306 Gene3D G3DSA:3.30.470.30 77 177 2.6E-49 T 11-10-2018 Tbd_0812 caa45d2453c976808c478613e1d49672 306 SUPERFAMILY SSF50249 199 303 4.11E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 Gene3D G3DSA:3.90.1280.10 235 292 1.3E-12 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 Gene3D G3DSA:3.55.30.10 13 184 8.9E-53 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 Pfam PF01430 Hsp33 protein 18 281 5.2E-70 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 SUPERFAMILY SSF118352 234 291 1.57E-12 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 Gene3D G3DSA:1.10.287.480 187 234 4.6E-13 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 PIRSF PIRSF005261 7 294 1.2E-63 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Tbd_0750 82d0598b1962f0a106efc66b073d7553 297 SUPERFAMILY SSF64397 17 240 5.49E-59 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Tbd_1799 3df79ef51fa6df463badf8d07a1277fb 455 SUPERFAMILY SSF56935 25 455 5.5E-47 T 11-10-2018 Tbd_1799 3df79ef51fa6df463badf8d07a1277fb 455 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 32 429 8.7E-28 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Tbd_1799 3df79ef51fa6df463badf8d07a1277fb 455 Gene3D G3DSA:2.40.160.60 24 455 5.2E-78 T 11-10-2018 Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 Gene3D G3DSA:3.10.580.10 1 148 1.7E-37 T 11-10-2018 Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 Pfam PF00571 CBS domain 3 58 7.2E-10 T 11-10-2018 IPR000644 CBS domain Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 Pfam PF00571 CBS domain 72 126 4.2E-15 T 11-10-2018 IPR000644 CBS domain Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 SMART SM00116 10 61 8.1E-7 T 11-10-2018 IPR000644 CBS domain Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 SMART SM00116 79 127 2.2E-8 T 11-10-2018 IPR000644 CBS domain Tbd_1388 f0088f67a8f79830f3fd26ca2b84f88b 149 SUPERFAMILY SSF54631 1 133 1.89E-31 T 11-10-2018 Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 SUPERFAMILY SSF52540 7 237 1.75E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 Gene3D G3DSA:3.40.50.300 282 529 1.9E-51 T 11-10-2018 Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 Pfam PF00005 ABC transporter 18 184 3.9E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 SMART SM00382 26 238 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 SMART SM00382 344 512 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 Pfam PF00005 ABC transporter 336 467 4.8E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 SUPERFAMILY SSF52540 297 527 6.37E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 Pfam PF12848 ABC transporter 224 309 8.6E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain Tbd_0151 c1ee0f912ba7deb7c6469183c428f610 530 Gene3D G3DSA:3.40.50.300 5 279 2.5E-57 T 11-10-2018 Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 Gene3D G3DSA:3.40.50.720 140 264 6.9E-33 T 11-10-2018 Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 SUPERFAMILY SSF51735 281 549 1.43E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 Pfam PF02719 Polysaccharide biosynthesis protein 283 570 5.2E-122 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 Gene3D G3DSA:3.40.50.720 278 583 3.7E-114 T 11-10-2018 Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 SUPERFAMILY SSF51735 142 270 4.33E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1871 02b85cd5dd56346b711430f4c52b60c4 614 Pfam PF13727 CoA-binding domain 60 238 4.6E-15 T 11-10-2018 Tbd_1014 cc9ea2d4e7fff607cba44e7e83dcf90d 121 SUPERFAMILY SSF46955 16 92 1.97E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_1014 cc9ea2d4e7fff607cba44e7e83dcf90d 121 Gene3D G3DSA:1.10.1660.10 12 88 6.8E-21 T 11-10-2018 Tbd_1014 cc9ea2d4e7fff607cba44e7e83dcf90d 121 Pfam PF13411 MerR HTH family regulatory protein 18 86 8.3E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_1014 cc9ea2d4e7fff607cba44e7e83dcf90d 121 SMART SM00422 18 88 8.2E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 Gene3D G3DSA:3.20.20.80 3 71 1.0E-14 T 11-10-2018 Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 Gene3D G3DSA:3.20.20.80 72 454 4.5E-134 T 11-10-2018 Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 Pfam PF02446 4-alpha-glucanotransferase 14 67 2.2E-9 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 Pfam PF02446 4-alpha-glucanotransferase 76 431 2.2E-114 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 SUPERFAMILY SSF51445 6 453 6.56E-138 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_2059 3a74936c36fd20cfdaa869f1ca41eb67 456 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 76 438 2.3E-65 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tbd_0982 d0d49c09c43cc8639ffa8e0f3ba3ae66 312 Gene3D G3DSA:3.30.2010.10 106 191 4.9E-8 T 11-10-2018 Tbd_0982 d0d49c09c43cc8639ffa8e0f3ba3ae66 312 Pfam PF01435 Peptidase family M48 112 290 2.8E-28 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_1638 ad2e840fed92d9df55a1133eeaf6d694 237 SMART SM00858 113 175 7.6E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tbd_1638 ad2e840fed92d9df55a1133eeaf6d694 237 Pfam PF13144 Chaperone for flagella basal body P-ring formation 39 235 1.6E-43 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Tbd_1638 ad2e840fed92d9df55a1133eeaf6d694 237 Gene3D G3DSA:2.30.30.760 179 236 2.8E-18 T 11-10-2018 Tbd_1638 ad2e840fed92d9df55a1133eeaf6d694 237 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 235 1.8E-35 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 331 2.6E-26 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 SUPERFAMILY SSF52467 156 355 1.19E-36 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 SUPERFAMILY SSF52518 1 172 1.36E-23 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Gene3D G3DSA:3.40.50.1220 202 357 1.1E-79 T 11-10-2018 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 SUPERFAMILY SSF52518 368 552 3.4E-36 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Gene3D G3DSA:3.40.50.970 358 517 1.1E-79 T 11-10-2018 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 517 9.8E-25 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Gene3D G3DSA:3.40.50.970 1 176 6.5E-38 T 11-10-2018 Tbd_1876 07aeebdbbe17edc8d33d4ec629a78446 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 172 1.4E-35 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 ProSitePatterns PS00571 Amidases signature. 149 180 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 SUPERFAMILY SSF75304 5 481 7.33E-170 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 475 3.2E-186 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 Gene3D G3DSA:3.90.1300.10 3 484 2.3E-205 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 475 94.991 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tbd_0258 089dd2430ff67ddb2bb2760c5fbb83b5 485 Pfam PF01425 Amidase 22 464 1.1E-158 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 SUPERFAMILY SSF110921 392 500 1.96E-26 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Gene3D G3DSA:3.20.20.70 2 276 1.5E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 4.8E-38 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 4.0E-215 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 43.285 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Pfam PF00682 HMGL-like 6 273 1.2E-96 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Gene3D G3DSA:1.10.238.260 280 393 9.6E-36 T 11-10-2018 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 Gene3D G3DSA:3.30.160.270 394 501 5.0E-12 T 11-10-2018 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 SMART SM00917 370 501 1.2E-44 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tbd_1986 4b4ed9d72f76cb8f7e72411ebefed202 511 SUPERFAMILY SSF51569 1 291 4.03E-98 T 11-10-2018 Tbd_1073 02e40152c921659f2880930a8ffe093e 233 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 195 215 0.0022 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2379 8e2d9f4f1cedffa2f633091a37d2ac3d 322 Gene3D G3DSA:3.40.630.10 3 318 6.6E-54 T 11-10-2018 Tbd_2379 8e2d9f4f1cedffa2f633091a37d2ac3d 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 23 307 5.6E-21 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Tbd_2379 8e2d9f4f1cedffa2f633091a37d2ac3d 322 SUPERFAMILY SSF53187 22 317 1.36E-57 T 11-10-2018 Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 PRINTS PR01438 Universal stress protein signature 4 22 3.2E-13 T 11-10-2018 IPR006015 Universal stress protein A Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 PRINTS PR01438 Universal stress protein signature 124 146 3.2E-13 T 11-10-2018 IPR006015 Universal stress protein A Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 PRINTS PR01438 Universal stress protein signature 106 118 3.2E-13 T 11-10-2018 IPR006015 Universal stress protein A Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 SUPERFAMILY SSF52402 153 294 3.1E-24 T 11-10-2018 Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 Pfam PF00582 Universal stress protein family 153 293 2.6E-17 T 11-10-2018 IPR006016 UspA Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 Pfam PF00582 Universal stress protein family 5 146 3.0E-26 T 11-10-2018 IPR006016 UspA Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 SUPERFAMILY SSF52402 5 148 7.62E-33 T 11-10-2018 Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 Gene3D G3DSA:3.40.50.620 2 146 1.9E-32 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1735 d6a08fd860864badce1aaef265692f7a 301 Gene3D G3DSA:3.40.50.620 148 293 1.1E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 SUPERFAMILY SSF49503 577 699 7.1E-28 T 11-10-2018 IPR008972 Cupredoxin Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 SUPERFAMILY SSF49503 68 304 1.19E-15 T 11-10-2018 IPR008972 Cupredoxin Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 SUPERFAMILY SSF49503 333 481 6.96E-20 T 11-10-2018 IPR008972 Cupredoxin Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 Pfam PF07731 Multicopper oxidase 590 699 1.8E-21 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 Gene3D G3DSA:2.60.40.420 328 530 2.9E-58 T 11-10-2018 IPR008972 Cupredoxin Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 Gene3D G3DSA:2.60.40.420 565 704 8.9E-46 T 11-10-2018 IPR008972 Cupredoxin Tbd_1072 55e74161b63d83f7d3f2132128babacb 706 Gene3D G3DSA:2.60.40.420 58 302 2.6E-53 T 11-10-2018 IPR008972 Cupredoxin Tbd_1836 17256b9723413c154b5a4c77337aef62 191 SUPERFAMILY SSF88659 117 177 2.01E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tbd_1836 17256b9723413c154b5a4c77337aef62 191 SUPERFAMILY SSF88946 24 105 2.2E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1836 17256b9723413c154b5a4c77337aef62 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 176 1.3E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tbd_1836 17256b9723413c154b5a4c77337aef62 191 Pfam PF04542 Sigma-70 region 2 25 90 1.0E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tbd_1836 17256b9723413c154b5a4c77337aef62 191 Gene3D G3DSA:1.10.10.10 115 180 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1836 17256b9723413c154b5a4c77337aef62 191 Gene3D G3DSA:1.10.1740.10 20 92 1.5E-16 T 11-10-2018 Tbd_1836 17256b9723413c154b5a4c77337aef62 191 Pfam PF08281 Sigma-70, region 4 121 172 1.3E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 Pfam PF04751 Protein of unknown function (DUF615) 20 170 1.2E-57 T 11-10-2018 IPR006839 Ribosome-associated, YjgA Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 Gene3D G3DSA:1.10.60.30 106 176 5.2E-28 T 11-10-2018 Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 Gene3D G3DSA:1.10.60.30 30 104 3.1E-27 T 11-10-2018 Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 PIRSF PIRSF016183 5 176 1.4E-63 T 11-10-2018 IPR006839 Ribosome-associated, YjgA Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 9 174 21.352 T 11-10-2018 IPR006839 Ribosome-associated, YjgA Tbd_2147 4a47fb82504a5857f4e47b3a5c82f407 176 SUPERFAMILY SSF158710 31 173 2.48E-51 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily Tbd_1342 e8f6b141eb0ffb0bb7b2a8135a6e356a 138 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 20 138 1.8E-31 T 11-10-2018 IPR011979 Conserved hypothetical protein CHP02293 Tbd_1342 e8f6b141eb0ffb0bb7b2a8135a6e356a 138 Pfam PF09722 Protein of unknown function (DUF2384) 87 135 3.0E-16 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 PRINTS PR00419 Adrenodoxin reductase family signature 155 169 1.4E-5 T 11-10-2018 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 PRINTS PR00419 Adrenodoxin reductase family signature 24 46 1.4E-5 T 11-10-2018 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 PRINTS PR00419 Adrenodoxin reductase family signature 47 60 1.4E-5 T 11-10-2018 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 Gene3D G3DSA:3.90.660.10 63 294 8.4E-61 T 11-10-2018 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 Pfam PF13450 NAD(P)-binding Rossmann-like domain 27 75 2.9E-11 T 11-10-2018 Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 SUPERFAMILY SSF51905 24 331 2.22E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1276 b2a28e673427d537e019cdf07b5884a1 340 Gene3D G3DSA:3.50.50.60 26 329 8.4E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Pfam PF00042 Globin 8 102 9.4E-9 T 11-10-2018 IPR000971 Globin GO:0020037 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 SUPERFAMILY SSF46458 1 143 2.33E-35 T 11-10-2018 IPR009050 Globin-like superfamily Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Pfam PF00970 Oxidoreductase FAD-binding domain 179 256 3.0E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Gene3D G3DSA:3.40.50.80 259 391 2.2E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Gene3D G3DSA:1.10.490.10 1 144 1.1E-51 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Pfam PF00175 Oxidoreductase NAD-binding domain 267 367 4.4E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 SUPERFAMILY SSF52343 245 384 1.57E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 251 260 4.2E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 266 285 4.2E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 4.2E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 4.2E-10 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 Gene3D G3DSA:2.40.30.10 151 258 2.3E-32 T 11-10-2018 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 7.1E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 7.1E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 266 285 7.1E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 7.1E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2329 0e8a348cb31f3175ee275eaaa056a541 395 SUPERFAMILY SSF63380 150 256 2.33E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_1522 a545718973a718b25dc6d17052cc4290 265 Gene3D G3DSA:3.40.50.1860 98 207 2.9E-90 T 11-10-2018 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 SUPERFAMILY SSF53681 8 105 4.25E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 SUPERFAMILY SSF53681 110 263 1.44E-42 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 252 1.1E-69 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 Gene3D G3DSA:3.40.50.1860 9 254 2.9E-90 T 11-10-2018 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 Hamap MF_00258 Glutamate racemase [murI]. 7 256 36.442 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_1522 a545718973a718b25dc6d17052cc4290 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 215 1.7E-36 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Gene3D G3DSA:1.10.150.300 113 200 2.3E-150 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.9E-154 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Gene3D G3DSA:3.10.20.30 48 361 2.3E-150 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 SUPERFAMILY SSF52540 3 301 1.58E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 SUPERFAMILY SSF81271 279 359 8.28E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Gene3D G3DSA:3.40.50.300 3 278 2.3E-150 T 11-10-2018 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.1E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Pfam PF01926 50S ribosome-binding GTPase 5 125 4.0E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.118 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tbd_0390 8918125aa28e46c188a17433efb9fe48 363 PIRSF PIRSF006641 1 363 1.2E-150 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tbd_2515 1fc27c5a69ee09c985a37555d3f7245b 136 Gene3D G3DSA:2.60.40.3230 21 126 2.6E-25 T 11-10-2018 IPR038483 YcfL-like superfamily Tbd_2515 1fc27c5a69ee09c985a37555d3f7245b 136 Pfam PF07233 Protein of unknown function (DUF1425) 36 124 6.1E-23 T 11-10-2018 IPR010824 Protein of unknown function DUF1425 Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 269 33.228 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 Pfam PF00288 GHMP kinases N terminal domain 86 142 2.5E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 Gene3D G3DSA:3.30.70.890 159 276 1.2E-34 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 272 2.7E-80 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 SUPERFAMILY SSF55060 161 275 1.92E-36 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 Pfam PF08544 GHMP kinases C terminal 204 256 2.4E-6 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 SUPERFAMILY SSF54211 4 157 9.87E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 Gene3D G3DSA:3.30.230.10 1 157 1.2E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tbd_0386 c6287d7c34cb2f0513821209dea3e833 278 PIRSF PIRSF010376 1 276 5.6E-84 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tbd_2117 df69ae52836c6b5c1b797ab8353ac048 168 Gene3D G3DSA:3.40.30.10 28 168 3.3E-26 T 11-10-2018 Tbd_2117 df69ae52836c6b5c1b797ab8353ac048 168 SUPERFAMILY SSF52833 29 156 7.97E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2117 df69ae52836c6b5c1b797ab8353ac048 168 Pfam PF13098 Thioredoxin-like domain 44 138 3.0E-16 T 11-10-2018 IPR012336 Thioredoxin-like fold Tbd_1592 93a9b4aa25b4936f889972f16d5f5b3e 665 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 6 101 2.3E-25 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Tbd_1592 93a9b4aa25b4936f889972f16d5f5b3e 665 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 237 398 8.3E-42 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Tbd_1592 93a9b4aa25b4936f889972f16d5f5b3e 665 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 573 647 1.1E-6 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Tbd_1460 b52b16d7c1e408ac5fcb05f13fef3fac 114 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 4 106 7.8E-32 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1460 b52b16d7c1e408ac5fcb05f13fef3fac 114 PIRSF PIRSF006821 1 108 1.3E-17 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_0688 b5fbc2e77c05e23329b04573773f7ee5 194 PIRSF PIRSF004633 25 194 4.1E-16 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain Tbd_0688 b5fbc2e77c05e23329b04573773f7ee5 194 Gene3D G3DSA:2.30.110.10 40 193 1.5E-43 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_0688 b5fbc2e77c05e23329b04573773f7ee5 194 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 132 1.1E-12 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Tbd_0688 b5fbc2e77c05e23329b04573773f7ee5 194 SUPERFAMILY SSF50475 37 188 5.05E-34 T 11-10-2018 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.6E-97 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 Gene3D G3DSA:3.30.260.10 136 410 3.6E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 SUPERFAMILY SSF48592 7 521 2.98E-78 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 SUPERFAMILY SSF52029 184 376 2.09E-82 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.0E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.0E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.0E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.0E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.0E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.345 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 Gene3D G3DSA:3.50.7.10 192 372 3.6E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 Gene3D G3DSA:1.10.560.10 8 521 3.6E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 SUPERFAMILY SSF54849 137 203 8.93E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tbd_0091 0311d0004a3b8409ff4b91e31a7c9f69 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.5E-256 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tbd_2664 77f084417711b1ff5d3f99f4cfabce59 352 Pfam PF11306 Protein of unknown function (DUF3108) 135 345 3.2E-24 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 Gene3D G3DSA:3.40.50.150 169 491 2.8E-89 T 11-10-2018 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 223 237 4.3E-11 T 11-10-2018 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 206 4.3E-11 T 11-10-2018 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 4.3E-11 T 11-10-2018 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 Pfam PF02384 N-6 DNA Methylase 170 474 5.3E-51 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 SUPERFAMILY SSF53335 20 670 1.93E-114 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2680 f6de14e2a61df5652f721b382004e8e5 676 Pfam PF12161 HsdM N-terminal domain 21 155 5.0E-21 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Tbd_2429 682bfbadcaa18d9e55e96b284d0ae70c 152 Gene3D G3DSA:2.60.120.370 1 150 4.7E-40 T 11-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily Tbd_2429 682bfbadcaa18d9e55e96b284d0ae70c 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 149 5.5E-29 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family Tbd_2429 682bfbadcaa18d9e55e96b284d0ae70c 152 SUPERFAMILY SSF51197 2 149 1.87E-38 T 11-10-2018 Tbd_2429 682bfbadcaa18d9e55e96b284d0ae70c 152 Pfam PF04074 Domain of unknown function (DUF386) 2 146 6.5E-41 T 11-10-2018 IPR004375 YhcH/YjgK/YiaL family Tbd_0440 24802870d6409e8d4b3dc87e5f262968 86 Pfam PF09723 Zinc ribbon domain 1 40 3.7E-13 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tbd_0440 24802870d6409e8d4b3dc87e5f262968 86 SUPERFAMILY SSF57802 4 36 8.95E-5 T 11-10-2018 Tbd_0440 24802870d6409e8d4b3dc87e5f262968 86 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 4.4E-20 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tbd_0440 24802870d6409e8d4b3dc87e5f262968 86 SMART SM00834 1 42 1.4E-15 T 11-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tbd_2608 ade0d2b464426965570bd095a7cc85ab 157 Gene3D G3DSA:3.40.50.620 7 117 5.1E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2608 ade0d2b464426965570bd095a7cc85ab 157 Pfam PF00582 Universal stress protein family 7 113 2.6E-6 T 11-10-2018 IPR006016 UspA Tbd_2608 ade0d2b464426965570bd095a7cc85ab 157 SUPERFAMILY SSF52402 6 113 1.0E-9 T 11-10-2018 Tbd_1484 6c5ba34523fea9ac623169a8e7d3426c 87 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 22 51 5.7E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1484 6c5ba34523fea9ac623169a8e7d3426c 87 SUPERFAMILY SSF46626 2 83 7.16E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1484 6c5ba34523fea9ac623169a8e7d3426c 87 Gene3D G3DSA:1.10.760.10 20 86 3.4E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0484 93643ccbe3d562d369de0fa7e5bdab59 161 Pfam PF04191 Phospholipid methyltransferase 50 149 4.1E-14 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Tbd_0484 93643ccbe3d562d369de0fa7e5bdab59 161 Gene3D G3DSA:1.20.120.1630 2 161 2.5E-26 T 11-10-2018 Tbd_0484 93643ccbe3d562d369de0fa7e5bdab59 161 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 115 161 2.0E-20 T 11-10-2018 Tbd_0529 83559ac897489a666232af4b89f80ad7 278 PIRSF PIRSF005052 1 278 6.3E-107 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Tbd_0529 83559ac897489a666232af4b89f80ad7 278 Pfam PF03668 P-loop ATPase protein family 1 277 3.4E-91 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Tbd_0529 83559ac897489a666232af4b89f80ad7 278 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 278 38.612 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Tbd_0529 83559ac897489a666232af4b89f80ad7 278 SUPERFAMILY SSF52540 2 152 3.99E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1020 86f258fb89d5a0d87d2661d317e1297a 318 SUPERFAMILY SSF53335 32 304 1.62E-7 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1020 86f258fb89d5a0d87d2661d317e1297a 318 PIRSF PIRSF018005 3 315 4.6E-98 T 11-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 Tbd_1020 86f258fb89d5a0d87d2661d317e1297a 318 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 15 310 9.6E-110 T 11-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 Tbd_1020 86f258fb89d5a0d87d2661d317e1297a 318 Gene3D G3DSA:3.40.50.150 42 220 9.9E-36 T 11-10-2018 Tbd_1020 86f258fb89d5a0d87d2661d317e1297a 318 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 17 311 2.0E-92 T 11-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent Tbd_1870 22296bf96ec32abe40dea9aa80d6a451 352 Gene3D G3DSA:3.40.50.2000 164 336 1.3E-39 T 11-10-2018 Tbd_1870 22296bf96ec32abe40dea9aa80d6a451 352 Gene3D G3DSA:3.40.50.2000 1 150 8.2E-25 T 11-10-2018 Tbd_1870 22296bf96ec32abe40dea9aa80d6a451 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 314 9.4E-29 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Tbd_1870 22296bf96ec32abe40dea9aa80d6a451 352 SUPERFAMILY SSF53756 1 333 2.83E-77 T 11-10-2018 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 PIRSF PIRSF038971 2 377 8.2E-117 T 11-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 SUPERFAMILY SSF51338 4 357 6.01E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 376 8.5E-122 T 11-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 Gene3D G3DSA:2.30.40.10 342 357 2.2E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 Gene3D G3DSA:3.20.20.140 311 339 2.2E-6 T 11-10-2018 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 Gene3D G3DSA:2.30.40.10 15 53 8.9E-15 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 Pfam PF01979 Amidohydrolase family 51 375 1.7E-12 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 SUPERFAMILY SSF51556 54 343 2.1E-23 T 11-10-2018 IPR032466 Metal-dependent hydrolase Tbd_2290 2c6b11808b2d9f2fdb8d62b77705e63e 384 Gene3D G3DSA:3.20.20.140 54 112 8.9E-15 T 11-10-2018 Tbd_1531 18dcb746253f37b22de8019d95f1a1f1 87 SUPERFAMILY SSF82657 1 86 1.31E-23 T 11-10-2018 IPR036065 BolA-like superfamily Tbd_1531 18dcb746253f37b22de8019d95f1a1f1 87 Pfam PF01722 BolA-like protein 12 86 2.4E-26 T 11-10-2018 IPR002634 BolA protein Tbd_1531 18dcb746253f37b22de8019d95f1a1f1 87 Gene3D G3DSA:3.30.300.90 2 87 3.7E-25 T 11-10-2018 Tbd_1531 18dcb746253f37b22de8019d95f1a1f1 87 PIRSF PIRSF003113 1 87 3.0E-23 T 11-10-2018 IPR002634 BolA protein Tbd_2156 612406ea3a5540c923747bbe11e2407a 131 PIRSF PIRSF021774 1 131 1.9E-44 T 11-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 Tbd_2156 612406ea3a5540c923747bbe11e2407a 131 Gene3D G3DSA:3.30.310.70 4 129 5.7E-48 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_2156 612406ea3a5540c923747bbe11e2407a 131 Pfam PF03625 Domain of unknown function DUF302 36 99 1.8E-28 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_2156 612406ea3a5540c923747bbe11e2407a 131 SUPERFAMILY SSF103247 9 128 4.97E-38 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 1.0E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 PIRSF PIRSF029827 1 91 3.9E-38 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 Gene3D G3DSA:1.10.3880.10 1 91 5.9E-39 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 89 3.1E-42 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 89 26.254 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Tbd_0024 de82ed9cf3e95139982ca5086706e062 91 SUPERFAMILY SSF111148 1 90 1.07E-37 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Tbd_1868 4e74977f269055ddc0f864bd83f16b85 376 Pfam PF00534 Glycosyl transferases group 1 195 345 1.5E-19 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_1868 4e74977f269055ddc0f864bd83f16b85 376 SUPERFAMILY SSF53756 8 371 2.66E-55 T 11-10-2018 Tbd_1868 4e74977f269055ddc0f864bd83f16b85 376 Gene3D G3DSA:3.40.50.2000 184 350 4.8E-24 T 11-10-2018 Tbd_1868 4e74977f269055ddc0f864bd83f16b85 376 Pfam PF13439 Glycosyltransferase Family 4 19 170 2.2E-24 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_1868 4e74977f269055ddc0f864bd83f16b85 376 Gene3D G3DSA:3.40.50.2000 9 179 3.4E-22 T 11-10-2018 Tbd_1961 2ecb415e504c288eea5b3643318ae492 97 Gene3D G3DSA:3.30.2310.20 1 93 2.3E-9 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tbd_1961 2ecb415e504c288eea5b3643318ae492 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 8.4E-13 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Tbd_0661 c5a650e95ed156e44e887c1ddb3238f3 181 Pfam PF02635 DsrE/DsrF-like family 76 163 1.8E-4 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_0661 c5a650e95ed156e44e887c1ddb3238f3 181 SUPERFAMILY SSF75169 56 164 1.6E-8 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.0E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 SUPERFAMILY SSF51735 8 243 7.89E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.3E-21 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 Pfam PF00106 short chain dehydrogenase 8 187 4.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0028 T 11-10-2018 Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 Gene3D G3DSA:3.40.50.720 6 248 1.1E-51 T 11-10-2018 Tbd_2785 6156d0fb6061bd5f2de206664f03bbdc 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 1.1E-62 T 11-10-2018 Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 SUPERFAMILY SSF51735 8 254 1.67E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 8.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 8.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 Gene3D G3DSA:3.40.50.720 1 252 2.7E-77 T 11-10-2018 Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_0924 ffad3325fc8e5f01286a6b84653a6b29 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_2462 8096b08e23ef811c454bc8703a2004bb 1095 Gene3D G3DSA:3.40.710.10 787 1019 6.3E-14 T 11-10-2018 Tbd_2462 8096b08e23ef811c454bc8703a2004bb 1095 SUPERFAMILY SSF53955 136 288 5.91E-8 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_2462 8096b08e23ef811c454bc8703a2004bb 1095 SUPERFAMILY SSF56601 776 1000 3.03E-22 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tbd_2462 8096b08e23ef811c454bc8703a2004bb 1095 Gene3D G3DSA:1.10.3810.10 119 291 3.8E-6 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_2462 8096b08e23ef811c454bc8703a2004bb 1095 Pfam PF00912 Transglycosylase 127 330 1.9E-20 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_1781 f5e75c8e04c25f0a30648ae07b2d2a8b 365 Gene3D G3DSA:3.40.50.2000 181 349 7.7E-14 T 11-10-2018 Tbd_1781 f5e75c8e04c25f0a30648ae07b2d2a8b 365 Pfam PF13692 Glycosyl transferases group 1 210 329 3.2E-6 T 11-10-2018 Tbd_1781 f5e75c8e04c25f0a30648ae07b2d2a8b 365 SUPERFAMILY SSF53756 10 361 1.88E-30 T 11-10-2018 Tbd_1781 f5e75c8e04c25f0a30648ae07b2d2a8b 365 Pfam PF09314 Domain of unknown function (DUF1972) 3 176 5.2E-15 T 11-10-2018 IPR015393 Domain of unknown function DUF1972 Tbd_1781 f5e75c8e04c25f0a30648ae07b2d2a8b 365 Gene3D G3DSA:3.40.50.2000 7 180 1.0E-7 T 11-10-2018 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 Gene3D G3DSA:3.30.1330.60 68 186 1.1E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 82 185 8.7E-41 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 PRINTS PR01021 OMPA domain signature 115 130 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 PRINTS PR01021 OMPA domain signature 85 107 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 PRINTS PR01021 OMPA domain signature 130 146 1.0E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 SUPERFAMILY SSF103088 80 184 2.75E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 185 27.537 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 ProSitePatterns PS01068 OmpA-like domain. 117 161 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Tbd_2205 1d8a1a32fe0537fc78eb37c79eda2de1 188 Pfam PF00691 OmpA family 84 179 8.7E-19 T 11-10-2018 IPR006665 OmpA-like domain Tbd_1754 1474b70e72b46953aa012792fbce58b3 112 Gene3D G3DSA:3.10.20.280 1 87 1.3E-34 T 11-10-2018 IPR037021 RnfH superfamily Tbd_1754 1474b70e72b46953aa012792fbce58b3 112 SUPERFAMILY SSF54285 3 77 1.44E-26 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tbd_1754 1474b70e72b46953aa012792fbce58b3 112 Pfam PF03658 RnfH family Ubiquitin 4 85 1.8E-36 T 11-10-2018 IPR005346 RnfH protein Tbd_1754 1474b70e72b46953aa012792fbce58b3 112 Hamap MF_00460 Protein RnfH [rnfH]. 3 93 26.929 T 11-10-2018 IPR005346 RnfH protein Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 Pfam PF08245 Mur ligase middle domain 47 186 4.7E-11 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 SUPERFAMILY SSF53623 6 284 1.15E-86 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 415 1.7E-103 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 SUPERFAMILY SSF53244 285 417 2.2E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 285 364 2.8E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 Gene3D G3DSA:3.90.190.20 287 421 5.1E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 Gene3D G3DSA:3.40.1190.10 3 285 1.3E-90 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tbd_1911 a7625594eb22105d65a91ab9d4d76bb7 422 PIRSF PIRSF001563 3 422 1.6E-111 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tbd_2312 1b3386e5e4e33c333a11caa69e84900c 149 SUPERFAMILY SSF49764 14 148 4.34E-40 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_2312 1b3386e5e4e33c333a11caa69e84900c 149 Pfam PF00011 Hsp20/alpha crystallin family 48 148 8.6E-26 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tbd_2312 1b3386e5e4e33c333a11caa69e84900c 149 Gene3D G3DSA:2.60.40.790 15 149 1.8E-38 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 SMART SM00729 142 367 2.0E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Pfam PF00919 Uncharacterized protein family UPF0004 13 99 1.5E-19 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Gene3D G3DSA:2.40.50.140 382 443 3.0E-16 T 11-10-2018 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Pfam PF04055 Radical SAM superfamily 148 325 6.3E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 SUPERFAMILY SSF102114 133 372 6.93E-49 T 11-10-2018 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 439 8.3E-171 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 11 442 60.312 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 440 1.3E-98 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Gene3D G3DSA:3.80.30.20 140 381 4.8E-69 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tbd_1764 4e5dfdb13661198fe8cf97ac0d6a89af 443 Gene3D G3DSA:3.40.50.12160 12 128 6.0E-27 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 SMART SM00487 255 445 1.2E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Gene3D G3DSA:3.40.50.300 443 615 2.6E-52 T 11-10-2018 Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 SUPERFAMILY SSF52540 169 439 1.33E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 SUPERFAMILY SSF50249 11 164 3.26E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 SMART SM00490 490 574 1.7E-19 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Pfam PF00270 DEAD/DEAH box helicase 261 417 2.0E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Gene3D G3DSA:2.40.50.140 42 134 1.5E-8 T 11-10-2018 Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Gene3D G3DSA:3.40.50.300 200 435 1.6E-82 T 11-10-2018 Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Pfam PF00271 Helicase conserved C-terminal domain 466 573 1.9E-16 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 649 2.3E-205 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 Pfam PF17191 RecG wedge domain 11 163 1.1E-9 T 11-10-2018 IPR033454 RecG, wedge domain Tbd_0469 b903785d3d0a718f583c9a0479ab4b6d 678 SUPERFAMILY SSF52540 280 637 1.93E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0576 bf22148ba514c39f90368673a4d7510d 400 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 373 1.8E-28 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Tbd_0576 bf22148ba514c39f90368673a4d7510d 400 SUPERFAMILY SSF56935 23 398 2.12E-61 T 11-10-2018 Tbd_0576 bf22148ba514c39f90368673a4d7510d 400 Gene3D G3DSA:2.40.160.60 22 400 7.4E-82 T 11-10-2018 Tbd_0013 62fd90392df7e7338b6923a5f7917e14 403 SMART SM00257 36 85 1.6E-6 T 11-10-2018 IPR018392 LysM domain Tbd_0013 62fd90392df7e7338b6923a5f7917e14 403 Gene3D G3DSA:3.10.350.10 36 83 8.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily Tbd_0013 62fd90392df7e7338b6923a5f7917e14 403 SUPERFAMILY SSF54106 36 84 8.76E-7 T 11-10-2018 Tbd_0013 62fd90392df7e7338b6923a5f7917e14 403 Pfam PF01476 LysM domain 37 83 4.6E-13 T 11-10-2018 IPR018392 LysM domain Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 Pfam PF08521 Two-component sensor kinase N-terminal 16 147 8.5E-10 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 2.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 4.2E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 4.2E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 SMART SM00304 172 224 0.0017 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 SUPERFAMILY SSF47384 208 287 2.16E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 Gene3D G3DSA:1.10.287.130 176 288 3.9E-19 T 11-10-2018 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 437 2.9E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 SMART SM00387 332 439 3.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 SMART SM00388 225 289 6.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 SUPERFAMILY SSF55874 279 438 1.03E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2792 a95d49d70efaf3ede8adb79023b20ba9 444 Gene3D G3DSA:3.30.565.10 298 443 7.8E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_0937 81b506cad584967b8be2c0aa0b3f3572 911 SUPERFAMILY SSF52540 13 243 4.05E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0937 81b506cad584967b8be2c0aa0b3f3572 911 SUPERFAMILY SSF52540 69 430 1.43E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0937 81b506cad584967b8be2c0aa0b3f3572 911 Gene3D G3DSA:3.40.50.300 255 457 1.2E-22 T 11-10-2018 Tbd_0937 81b506cad584967b8be2c0aa0b3f3572 911 Gene3D G3DSA:3.40.50.300 8 252 9.3E-10 T 11-10-2018 Tbd_0937 81b506cad584967b8be2c0aa0b3f3572 911 Pfam PF04851 Type III restriction enzyme, res subunit 13 238 3.2E-30 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tbd_1698 de453ee6f11bb59502852cac51466796 424 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 5 421 2.8E-145 T 11-10-2018 IPR017830 Hydroxysqualene dehydroxylase HpnE MetaCyc: PWY-7072 Tbd_1698 de453ee6f11bb59502852cac51466796 424 SUPERFAMILY SSF51905 1 423 5.18E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1698 de453ee6f11bb59502852cac51466796 424 Gene3D G3DSA:3.50.50.60 142 424 3.4E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1698 de453ee6f11bb59502852cac51466796 424 Pfam PF01593 Flavin containing amine oxidoreductase 13 420 7.0E-25 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Tbd_1698 de453ee6f11bb59502852cac51466796 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 388 403 1.1E-6 T 11-10-2018 Tbd_1698 de453ee6f11bb59502852cac51466796 424 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.1E-6 T 11-10-2018 Tbd_1698 de453ee6f11bb59502852cac51466796 424 Gene3D G3DSA:3.50.50.60 1 82 4.8E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1122 cd20e3016604ac713c453ea18569dfe6 287 Pfam PF01497 Periplasmic binding protein 41 260 5.2E-24 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Tbd_1122 cd20e3016604ac713c453ea18569dfe6 287 Gene3D G3DSA:3.40.50.1980 158 283 1.2E-28 T 11-10-2018 Tbd_1122 cd20e3016604ac713c453ea18569dfe6 287 SUPERFAMILY SSF53807 17 284 2.83E-60 T 11-10-2018 Tbd_1122 cd20e3016604ac713c453ea18569dfe6 287 Gene3D G3DSA:3.40.50.1980 37 157 1.7E-34 T 11-10-2018 Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 SMART SM00382 34 222 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 Gene3D G3DSA:3.40.50.300 3 226 2.1E-60 T 11-10-2018 Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 SUPERFAMILY SSF52540 5 223 1.43E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 6.9E-97 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 Tbd_1760 62f3af8831c50cc6204013dad2a148c4 226 Pfam PF00005 ABC transporter 25 173 7.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 1.4E-7 T 11-10-2018 Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 311 1.4E-7 T 11-10-2018 Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 1.4E-7 T 11-10-2018 Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 SUPERFAMILY SSF51905 14 387 2.37E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 Pfam PF01494 FAD binding domain 15 326 3.5E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Tbd_2763 5405c77958c8832087bbdf2936ff0e71 445 Gene3D G3DSA:3.50.50.60 8 417 2.2E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1203 c22ade0f97c27a91f88c9870af4371a4 128 Pfam PF04343 Protein of unknown function, DUF488 16 120 4.2E-15 T 11-10-2018 IPR007438 Protein of unknown function DUF488 Tbd_1186 1b252ae23f9cfa914359846a66b1c076 104 Gene3D G3DSA:1.10.150.250 21 100 2.7E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Tbd_1186 1b252ae23f9cfa914359846a66b1c076 104 Pfam PF03937 Flavinator of succinate dehydrogenase 28 97 9.0E-20 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase Tbd_1186 1b252ae23f9cfa914359846a66b1c076 104 SUPERFAMILY SSF109910 25 100 2.62E-18 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Tbd_0232 75780c05fa921ae79dd28e3c98219734 185 SUPERFAMILY SSF55811 13 180 1.49E-52 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_0232 75780c05fa921ae79dd28e3c98219734 185 ProSitePatterns PS00893 Nudix box signature. 81 102 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_0232 75780c05fa921ae79dd28e3c98219734 185 Gene3D G3DSA:3.90.79.10 7 185 1.3E-57 T 11-10-2018 Tbd_0232 75780c05fa921ae79dd28e3c98219734 185 Pfam PF00293 NUDIX domain 48 156 7.4E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_0294 5901f1181322782ef20bc00dd2e7c585 413 Pfam PF13439 Glycosyltransferase Family 4 62 203 6.3E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_0294 5901f1181322782ef20bc00dd2e7c585 413 Gene3D G3DSA:3.40.50.2000 202 383 7.7E-66 T 11-10-2018 Tbd_0294 5901f1181322782ef20bc00dd2e7c585 413 Pfam PF00534 Glycosyl transferases group 1 212 383 4.0E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_0294 5901f1181322782ef20bc00dd2e7c585 413 SUPERFAMILY SSF53756 18 398 2.2E-73 T 11-10-2018 Tbd_0294 5901f1181322782ef20bc00dd2e7c585 413 Gene3D G3DSA:3.40.50.2000 97 201 7.7E-66 T 11-10-2018 Tbd_1494 7252666f67ca172ba9068539ea1b2613 188 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 73 182 3.0E-58 T 11-10-2018 IPR020358 Uncharacterised protein family Y4oB Tbd_1494 7252666f67ca172ba9068539ea1b2613 188 Pfam PF09722 Protein of unknown function (DUF2384) 132 186 1.2E-11 T 11-10-2018 IPR024467 Domain of unknown function DUF2384 Tbd_0993 959e1cad3697e98e4ffbcb88b26aa96a 229 Gene3D G3DSA:1.20.120.20 19 184 1.2E-5 T 11-10-2018 Tbd_0659 9eb88db12d5f158a92c58a6c3ba16168 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 67 77 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0659 9eb88db12d5f158a92c58a6c3ba16168 174 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 162 173 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0659 9eb88db12d5f158a92c58a6c3ba16168 174 Gene3D G3DSA:2.60.40.200 22 174 9.5E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0659 9eb88db12d5f158a92c58a6c3ba16168 174 SUPERFAMILY SSF49329 28 173 2.23E-47 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_0659 9eb88db12d5f158a92c58a6c3ba16168 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 173 8.2E-31 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 Pfam PF00771 FHIPEP family 25 677 9.1E-251 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 Gene3D G3DSA:3.40.30.60 356 499 7.9E-46 T 11-10-2018 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 15 682 2.0E-244 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 Gene3D G3DSA:1.10.8.540 500 588 9.5E-26 T 11-10-2018 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 2.2E-55 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 PIRSF PIRSF005419 2 692 3.0E-274 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tbd_1177 9eaa76e69d9a9705e463e619aea92974 692 Gene3D G3DSA:1.10.490.80 595 685 4.4E-8 T 11-10-2018 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 SUPERFAMILY SSF52141 32 210 6.54E-63 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 Gene3D G3DSA:3.40.470.10 32 213 7.3E-70 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 Pfam PF03167 Uracil DNA glycosylase superfamily 58 203 2.9E-46 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 43 204 9.8E-62 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 SMART SM00987 57 204 1.2E-40 T 11-10-2018 Tbd_1723 3c5aaf4d6b5ce8618a11203193560ef6 213 SMART SM00986 57 204 1.2E-40 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Gene3D G3DSA:3.40.30.10 463 588 9.8E-27 T 11-10-2018 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 ProSitePatterns PS00194 Thioredoxin family active site. 495 513 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 176 373 1.7E-17 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Pfam PF13899 Thioredoxin-like 477 560 5.7E-11 T 11-10-2018 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Pfam PF11412 Disulphide bond corrector protein DsbC 23 132 3.7E-29 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 SUPERFAMILY SSF74863 21 132 1.44E-34 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 2 587 34.707 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 Gene3D G3DSA:2.60.40.1250 16 147 6.7E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Tbd_2790 db0ebc5a373b1d20f63e2f93760c5142 589 SUPERFAMILY SSF52833 474 581 2.31E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1521 eb44a96b6f003f71a30e1eba5667bcf0 204 SUPERFAMILY SSF161111 18 202 4.97E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_1521 eb44a96b6f003f71a30e1eba5667bcf0 204 Gene3D G3DSA:1.20.1510.10 19 74 6.8E-6 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_1521 eb44a96b6f003f71a30e1eba5667bcf0 204 Gene3D G3DSA:1.20.1510.10 76 201 1.4E-5 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_1521 eb44a96b6f003f71a30e1eba5667bcf0 204 Pfam PF01545 Cation efflux family 23 201 4.4E-11 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 Gene3D G3DSA:3.40.50.300 213 381 5.4E-49 T 11-10-2018 Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 SMART SM00490 259 340 7.4E-33 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 Gene3D G3DSA:3.40.50.300 1 211 8.6E-75 T 11-10-2018 Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 SUPERFAMILY SSF52540 73 358 3.72E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 Pfam PF00271 Helicase conserved C-terminal domain 233 340 8.9E-29 T 11-10-2018 IPR001650 Helicase, C-terminal Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 SMART SM00487 20 222 2.5E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tbd_2815 f06f2a2d34f3976a642f40afad345177 533 Pfam PF00270 DEAD/DEAH box helicase 25 190 9.9E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 Pfam PF04552 Sigma-54, DNA binding domain 321 473 1.3E-57 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 Gene3D G3DSA:1.10.10.60 416 473 4.4E-18 T 11-10-2018 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 473 9.1E-122 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 363 382 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 Pfam PF04963 Sigma-54 factor, core binding domain 113 303 3.0E-48 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 PRINTS PR00045 Sigma-54 factor signature 375 387 5.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 PRINTS PR00045 Sigma-54 factor signature 449 467 5.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 PRINTS PR00045 Sigma-54 factor signature 187 204 5.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 PRINTS PR00045 Sigma-54 factor signature 391 402 5.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 Gene3D G3DSA:1.10.10.1330 118 231 2.9E-16 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 PIRSF PIRSF000774 1 475 5.5E-143 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 1.3E-11 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0732 dd413147b03e579381e012c3b2ee537d 476 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 454 461 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 Gene3D G3DSA:3.40.50.720 6 326 1.8E-121 T 11-10-2018 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 Gene3D G3DSA:3.90.25.10 170 313 1.8E-121 T 11-10-2018 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 244 2.9E-44 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 4 332 49.531 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 6 331 6.0E-130 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 Tbd_0963 dcb36362b9e0d8ab78b4c4fd823e4c26 332 SUPERFAMILY SSF51735 6 330 5.75E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 Gene3D G3DSA:2.160.20.80 40 212 2.5E-42 T 11-10-2018 Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 SUPERFAMILY SSF141571 52 204 4.02E-40 T 11-10-2018 Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 Pfam PF00805 Pentapeptide repeats (8 copies) 55 92 5.0E-10 T 11-10-2018 IPR001646 Pentapeptide repeat Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 Pfam PF00805 Pentapeptide repeats (8 copies) 95 134 4.7E-7 T 11-10-2018 IPR001646 Pentapeptide repeat Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 Pfam PF00805 Pentapeptide repeats (8 copies) 174 199 1.4E-4 T 11-10-2018 IPR001646 Pentapeptide repeat Tbd_0916 743b0f95dbf55188ddf0015ac3f22a84 219 Pfam PF00805 Pentapeptide repeats (8 copies) 135 172 3.9E-11 T 11-10-2018 IPR001646 Pentapeptide repeat Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PRINTS PR01004 Flagellar FliJ protein signature 27 43 7.2E-13 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PRINTS PR01004 Flagellar FliJ protein signature 126 146 7.2E-13 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PRINTS PR01004 Flagellar FliJ protein signature 4 26 7.2E-13 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PRINTS PR01004 Flagellar FliJ protein signature 44 61 7.2E-13 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PRINTS PR01004 Flagellar FliJ protein signature 63 84 7.2E-13 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 PIRSF PIRSF019404 1 148 4.5E-50 T 11-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 142 1.3E-27 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tbd_1604 3cb7d8ef3ee72eb84d576e589f7a6cf7 149 Pfam PF02050 Flagellar FliJ protein 19 141 1.2E-31 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tbd_0347 d1174d8547fda744f579e459fc6e1107 339 Pfam PF00239 Resolvase, N terminal domain 78 200 7.7E-15 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tbd_0347 d1174d8547fda744f579e459fc6e1107 339 Gene3D G3DSA:3.40.50.1390 58 213 3.0E-23 T 11-10-2018 Tbd_0347 d1174d8547fda744f579e459fc6e1107 339 SMART SM00857 62 209 9.0E-24 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tbd_0347 d1174d8547fda744f579e459fc6e1107 339 Pfam PF07508 Recombinase 254 320 1.6E-11 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tbd_0347 d1174d8547fda744f579e459fc6e1107 339 SUPERFAMILY SSF53041 83 208 9.68E-17 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tbd_0184 5144db204a6475ad316007c0287f742f 171 SUPERFAMILY SSF52833 1 166 2.7E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0184 5144db204a6475ad316007c0287f742f 171 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_0184 5144db204a6475ad316007c0287f742f 171 Gene3D G3DSA:3.40.30.10 38 169 2.8E-36 T 11-10-2018 Tbd_0184 5144db204a6475ad316007c0287f742f 171 Pfam PF08534 Redoxin 41 160 1.1E-20 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Tbd_1798 612b0deb10c89f18b2c1ef6172c115d2 316 Gene3D G3DSA:3.10.50.40 142 234 2.9E-10 T 11-10-2018 Tbd_1798 612b0deb10c89f18b2c1ef6172c115d2 316 Pfam PF13145 PPIC-type PPIASE domain 124 244 2.0E-15 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Tbd_1798 612b0deb10c89f18b2c1ef6172c115d2 316 SUPERFAMILY SSF109998 34 168 7.85E-13 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tbd_1798 612b0deb10c89f18b2c1ef6172c115d2 316 TIGRFAM TIGR02925 cis_trans_EpsD: peptidyl-prolyl cis-trans isomerase, EpsD family 10 238 2.6E-102 T 11-10-2018 IPR014274 Peptidyl-prolyl cis-trans isomerase, EpsD-type Tbd_1798 612b0deb10c89f18b2c1ef6172c115d2 316 Gene3D G3DSA:1.10.4030.30 102 275 2.9E-10 T 11-10-2018 Tbd_1175 699b9d63955e3b20dcbcd163320bef1e 408 Pfam PF00483 Nucleotidyl transferase 1 265 9.4E-57 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_1175 699b9d63955e3b20dcbcd163320bef1e 408 SUPERFAMILY SSF53448 1 346 2.23E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1175 699b9d63955e3b20dcbcd163320bef1e 408 SUPERFAMILY SSF51161 286 386 1.28E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_1175 699b9d63955e3b20dcbcd163320bef1e 408 Gene3D G3DSA:3.90.550.10 1 280 3.6E-77 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1175 699b9d63955e3b20dcbcd163320bef1e 408 Gene3D G3DSA:2.160.10.10 281 393 6.6E-28 T 11-10-2018 Tbd_1387 12ab614ebe050f0238c796d08c8424ce 195 Pfam PF09990 Predicted membrane protein (DUF2231) 49 148 4.0E-24 T 11-10-2018 IPR019251 Domain of unknown function DUF2231, transmembrane Tbd_2478 4ff7ac0d8c07c48c96ad09367b847ecc 507 SUPERFAMILY SSF46548 70 173 3.84E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_2478 4ff7ac0d8c07c48c96ad09367b847ecc 507 Pfam PF13183 4Fe-4S dicluster domain 73 159 6.4E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2478 4ff7ac0d8c07c48c96ad09367b847ecc 507 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2478 4ff7ac0d8c07c48c96ad09367b847ecc 507 Pfam PF02754 Cysteine-rich domain 379 479 1.0E-4 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_2317 067783c3576b0935894c19d5df8cf498 157 Pfam PF02915 Rubrerythrin 11 125 6.9E-13 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tbd_2317 067783c3576b0935894c19d5df8cf498 157 Gene3D G3DSA:1.20.1260.10 3 132 1.3E-30 T 11-10-2018 IPR012347 Ferritin-like Tbd_2317 067783c3576b0935894c19d5df8cf498 157 SUPERFAMILY SSF47240 6 129 3.33E-30 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_1731 591044fae344a94c65d33d168aa20c72 212 SUPERFAMILY SSF55469 18 211 2.49E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tbd_1731 591044fae344a94c65d33d168aa20c72 212 Pfam PF00881 Nitroreductase family 25 197 5.0E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tbd_1731 591044fae344a94c65d33d168aa20c72 212 Gene3D G3DSA:3.40.109.10 16 212 5.7E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tbd_1330 438634efe78ea0ab76cda1941d0fd07f 121 ProDom PD074011 PRECURSOR SIGNAL RESISTANCE CZCI ZINC COBALT-ZINC-CADMIUM SYSTEM COBALT CATION CADMIUM 1 89 6.0E-27 T 11-10-2018 IPR020487 Cobalt/zinc/cadmium resistance protein CzcI Tbd_2422 254d2b53e623e5fc3091a3a82c24aab8 128 Gene3D G3DSA:3.40.50.1010 1 125 3.7E-7 T 11-10-2018 Tbd_2422 254d2b53e623e5fc3091a3a82c24aab8 128 SUPERFAMILY SSF88723 3 124 1.54E-16 T 11-10-2018 IPR029060 PIN-like domain superfamily Tbd_2422 254d2b53e623e5fc3091a3a82c24aab8 128 Pfam PF01850 PIN domain 4 121 3.2E-9 T 11-10-2018 IPR002716 PIN domain Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 Gene3D G3DSA:1.10.287.130 186 268 3.1E-7 T 11-10-2018 Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 SMART SM00387 312 417 3.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 SUPERFAMILY SSF47384 204 265 5.1E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 1.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 1.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 414 1.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 Gene3D G3DSA:3.30.565.10 282 416 3.7E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 SUPERFAMILY SSF55874 277 415 1.27E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2689 16c55c1843cf6519fe1db2bd500ebe78 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 414 1.3E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tbd_1131 6e6d2bad25bc604cb352dcfed4bbe741 98 SUPERFAMILY SSF75471 3 95 1.28E-26 T 11-10-2018 IPR035920 YhbY-like superfamily Tbd_1131 6e6d2bad25bc604cb352dcfed4bbe741 98 Gene3D G3DSA:3.30.110.60 2 98 1.1E-31 T 11-10-2018 IPR035920 YhbY-like superfamily Tbd_1131 6e6d2bad25bc604cb352dcfed4bbe741 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 87 1.3E-18 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Tbd_1131 6e6d2bad25bc604cb352dcfed4bbe741 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 97 1.0E-44 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Tbd_1131 6e6d2bad25bc604cb352dcfed4bbe741 98 SMART SM01103 4 87 4.5E-39 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Tbd_0228 a5f2882141a579041b6e3e1c9daae64c 192 Gene3D G3DSA:1.10.10.10 2 140 2.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0228 a5f2882141a579041b6e3e1c9daae64c 192 Pfam PF12802 MarR family 31 90 7.9E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_0228 a5f2882141a579041b6e3e1c9daae64c 192 SUPERFAMILY SSF46785 7 113 2.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0228 a5f2882141a579041b6e3e1c9daae64c 192 SMART SM00347 25 125 1.1E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.1E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.0E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.0E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 Gene3D G3DSA:3.30.700.10 9 134 4.8E-27 T 11-10-2018 Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 30 117 5.4E-21 T 11-10-2018 IPR031982 Type IV minor pilin ComP Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 SUPERFAMILY SSF54523 9 125 2.9E-25 T 11-10-2018 Tbd_1865 bd70b3701e1f686bb11d38215117bc0f 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 3.8E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0073 1ac9b1c86ec77180ade80a7572814cbb 147 Gene3D G3DSA:1.10.10.10 1 53 3.0E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0073 1ac9b1c86ec77180ade80a7572814cbb 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 44 2.9E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tbd_0073 1ac9b1c86ec77180ade80a7572814cbb 147 Gene3D G3DSA:3.30.70.3460 65 146 8.2E-16 T 11-10-2018 Tbd_1721 67faa5512119e0fad92138f8dc103ef4 244 Pfam PF04011 LemA family 25 207 5.9E-64 T 11-10-2018 IPR007156 LemA Tbd_1721 67faa5512119e0fad92138f8dc103ef4 244 SUPERFAMILY SSF140478 37 194 8.37E-53 T 11-10-2018 IPR023353 LemA-like domain superfamily Tbd_1721 67faa5512119e0fad92138f8dc103ef4 244 Gene3D G3DSA:1.20.1440.20 29 207 1.2E-60 T 11-10-2018 IPR023353 LemA-like domain superfamily Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 Gene3D G3DSA:1.10.510.10 140 230 3.6E-18 T 11-10-2018 Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 Pfam PF01163 RIO1 family 40 223 1.1E-43 T 11-10-2018 Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 Gene3D G3DSA:3.30.200.20 16 126 7.6E-5 T 11-10-2018 Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 SMART SM00090 5 234 4.9E-13 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Tbd_0611 11f41ffc270f2d59d26bcbbbeeb68874 282 SUPERFAMILY SSF56112 20 213 6.54E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_2335 066c8ffddb62e78e526d80f58c0268cb 237 Gene3D G3DSA:3.90.550.10 6 236 1.6E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2335 066c8ffddb62e78e526d80f58c0268cb 237 SUPERFAMILY SSF53448 7 232 2.7E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2335 066c8ffddb62e78e526d80f58c0268cb 237 Pfam PF00483 Nucleotidyl transferase 7 231 5.6E-22 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_0721 7a53d4521af3c955573908d1f9671364 402 SMART SM01209 113 280 0.0019 T 11-10-2018 Tbd_0721 7a53d4521af3c955573908d1f9671364 402 SUPERFAMILY SSF56059 92 316 6.01E-36 T 11-10-2018 Tbd_0721 7a53d4521af3c955573908d1f9671364 402 Pfam PF02655 ATP-grasp domain 148 281 4.2E-5 T 11-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Tbd_0721 7a53d4521af3c955573908d1f9671364 402 Gene3D G3DSA:3.30.470.20 107 400 1.8E-42 T 11-10-2018 Tbd_1121 2dc5affb66fc5212d9dabe8ae7c22eb3 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 190 3.0E-47 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_1121 2dc5affb66fc5212d9dabe8ae7c22eb3 198 PIRSF PIRSF000709 7 182 3.0E-8 T 11-10-2018 Tbd_1121 2dc5affb66fc5212d9dabe8ae7c22eb3 198 SMART SM00855 4 154 9.0E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_1121 2dc5affb66fc5212d9dabe8ae7c22eb3 198 Gene3D G3DSA:3.40.50.1240 4 195 1.2E-46 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_1121 2dc5affb66fc5212d9dabe8ae7c22eb3 198 SUPERFAMILY SSF53254 3 192 5.35E-49 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_0889 552e53b3dcb0e78025c9fa87776837aa 374 PIRSF PIRSF018953 3 374 1.2E-58 T 11-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 Tbd_0889 552e53b3dcb0e78025c9fa87776837aa 374 SMART SM01204 221 361 7.8E-37 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tbd_0889 552e53b3dcb0e78025c9fa87776837aa 374 Pfam PF08495 FIST N domain 43 219 2.7E-23 T 11-10-2018 IPR013702 FIST domain, N-terminal Tbd_0889 552e53b3dcb0e78025c9fa87776837aa 374 SMART SM00897 40 220 1.0E-32 T 11-10-2018 IPR013702 FIST domain, N-terminal Tbd_0889 552e53b3dcb0e78025c9fa87776837aa 374 Pfam PF10442 FIST C domain 221 360 1.3E-28 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tbd_0426 d174d5ee4642230981ae33019f1247db 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.9E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Tbd_0426 d174d5ee4642230981ae33019f1247db 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.53 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tbd_0426 d174d5ee4642230981ae33019f1247db 72 SMART SM00316 4 72 3.6E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_0426 d174d5ee4642230981ae33019f1247db 72 Gene3D G3DSA:2.40.50.140 1 72 3.3E-37 T 11-10-2018 Tbd_0426 d174d5ee4642230981ae33019f1247db 72 SUPERFAMILY SSF50249 1 70 1.18E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0426 d174d5ee4642230981ae33019f1247db 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.4E-37 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tbd_0308 2ea106f6226a90fe8375c26ec93b373a 309 SUPERFAMILY SSF53448 4 268 2.44E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0308 2ea106f6226a90fe8375c26ec93b373a 309 Gene3D G3DSA:3.90.550.10 3 231 7.8E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0308 2ea106f6226a90fe8375c26ec93b373a 309 Pfam PF00535 Glycosyl transferase family 2 6 168 2.1E-20 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0057 1a29090376de68a0b4780e731aa52059 310 SUPERFAMILY SSF52151 10 186 2.54E-53 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tbd_0057 1a29090376de68a0b4780e731aa52059 310 Pfam PF01734 Patatin-like phospholipase 15 171 2.3E-21 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Tbd_0057 1a29090376de68a0b4780e731aa52059 310 Gene3D G3DSA:3.40.1090.10 104 199 4.0E-13 T 11-10-2018 Tbd_0057 1a29090376de68a0b4780e731aa52059 310 Gene3D G3DSA:3.40.1090.10 2 103 8.2E-25 T 11-10-2018 Tbd_2416 a4ed79609f2af2bee8b81ca36c4da9bc 191 Pfam PF02325 YGGT family 12 79 2.0E-15 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 Tbd_2416 a4ed79609f2af2bee8b81ca36c4da9bc 191 Pfam PF02325 YGGT family 113 177 9.5E-15 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 Tbd_2698 26ca16b2587df1a465a62f40fc6e69a3 420 Gene3D G3DSA:3.40.50.11720 50 213 2.0E-49 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Tbd_2698 26ca16b2587df1a465a62f40fc6e69a3 420 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 41 215 1.1E-63 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Tbd_2698 26ca16b2587df1a465a62f40fc6e69a3 420 Gene3D G3DSA:3.40.50.2000 220 404 1.7E-62 T 11-10-2018 Tbd_2698 26ca16b2587df1a465a62f40fc6e69a3 420 SUPERFAMILY SSF53756 64 407 3.82E-16 T 11-10-2018 Tbd_0360 3ebd7a5a8495010a7c37e583f6204ca1 528 Pfam PF16930 Putative porin 37 528 1.4E-174 T 11-10-2018 IPR032638 Putative bacterial porin Tbd_0360 3ebd7a5a8495010a7c37e583f6204ca1 528 SUPERFAMILY SSF56935 160 504 2.27E-12 T 11-10-2018 Tbd_0128 f1eba170c7551ee9432f5de4e85ca7b1 352 Gene3D G3DSA:1.10.760.10 58 188 1.0E-43 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0128 f1eba170c7551ee9432f5de4e85ca7b1 352 SUPERFAMILY SSF46626 191 292 2.5E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0128 f1eba170c7551ee9432f5de4e85ca7b1 352 SUPERFAMILY SSF46626 74 181 2.42E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0128 f1eba170c7551ee9432f5de4e85ca7b1 352 Gene3D G3DSA:1.10.760.10 191 305 1.9E-41 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0128 f1eba170c7551ee9432f5de4e85ca7b1 352 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 201 281 4.1E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0565 c0b0e13b9b44f4f9d95341184ac292b4 104 Gene3D G3DSA:2.60.40.10 2 104 3.4E-35 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_0565 c0b0e13b9b44f4f9d95341184ac292b4 104 Pfam PF08770 Sulphur oxidation protein SoxZ 7 101 3.3E-38 T 11-10-2018 IPR014880 Sulphur oxidation protein SoxZ Tbd_0565 c0b0e13b9b44f4f9d95341184ac292b4 104 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 103 5.0E-42 T 11-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Tbd_0565 c0b0e13b9b44f4f9d95341184ac292b4 104 SUPERFAMILY SSF81296 1 103 1.54E-31 T 11-10-2018 IPR014756 Immunoglobulin E-set Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.8E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.2E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.2E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.2E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.2E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 SUPERFAMILY SSF54686 1 134 2.75E-52 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.2E-58 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.894 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0412 6df654f0c4abd6fbdf15594e7d14a2c2 138 Gene3D G3DSA:3.90.1170.10 1 136 4.4E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_1318 64d0470eb65050799ebf06eae3e3125d 190 SUPERFAMILY SSF56349 29 151 1.44E-13 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_1318 64d0470eb65050799ebf06eae3e3125d 190 Pfam PF00589 Phage integrase family 33 116 8.3E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_1318 64d0470eb65050799ebf06eae3e3125d 190 Gene3D G3DSA:1.10.443.10 25 162 3.5E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_0796 2ada3b5c6b149c118bcbc90a52f37e5f 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 143 36.11 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_0796 2ada3b5c6b149c118bcbc90a52f37e5f 145 Gene3D G3DSA:3.10.129.10 1 144 2.0E-61 T 11-10-2018 Tbd_0796 2ada3b5c6b149c118bcbc90a52f37e5f 145 Pfam PF07977 FabA-like domain 10 136 1.9E-38 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_0796 2ada3b5c6b149c118bcbc90a52f37e5f 145 SUPERFAMILY SSF54637 1 139 9.56E-49 T 11-10-2018 IPR029069 HotDog domain superfamily Tbd_0796 2ada3b5c6b149c118bcbc90a52f37e5f 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1 140 3.6E-62 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_2604 041abae676f442fcea74d72a981da212 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_2604 041abae676f442fcea74d72a981da212 301 Gene3D G3DSA:1.10.10.10 1 92 1.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2604 041abae676f442fcea74d72a981da212 301 SUPERFAMILY SSF53850 90 293 2.29E-27 T 11-10-2018 Tbd_2604 041abae676f442fcea74d72a981da212 301 Pfam PF03466 LysR substrate binding domain 90 295 2.3E-13 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_2604 041abae676f442fcea74d72a981da212 301 Gene3D G3DSA:3.40.190.290 93 300 3.1E-9 T 11-10-2018 Tbd_2604 041abae676f442fcea74d72a981da212 301 SUPERFAMILY SSF46785 3 85 7.96E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0733 bd143070e1f287702f76e6108b332758 195 Pfam PF01814 Hemerythrin HHE cation binding domain 28 145 3.2E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Tbd_0733 bd143070e1f287702f76e6108b332758 195 Gene3D G3DSA:1.20.120.520 14 165 7.1E-14 T 11-10-2018 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 126 148 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 91 115 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 263 289 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 32 48 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 49 70 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 235 262 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PRINTS PR00073 Coprogen oxidase signature 163 192 2.0E-82 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 167 191 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 SUPERFAMILY SSF102886 10 303 3.14E-134 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 Gene3D G3DSA:3.40.1500.10 1 303 6.7E-130 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 PIRSF PIRSF000166 4 303 1.3E-120 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 Pfam PF01218 Coproporphyrinogen III oxidase 11 303 2.0E-126 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_2461 468d95f0aae2644c11e5244dbe2dd344 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 5 278 53.896 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Tbd_1789 e887570200ec3d2d9096ccc788bc250b 550 SUPERFAMILY SSF51445 84 427 2.64E-40 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_1789 e887570200ec3d2d9096ccc788bc250b 550 Gene3D G3DSA:3.20.20.80 85 390 1.4E-45 T 11-10-2018 Tbd_1789 e887570200ec3d2d9096ccc788bc250b 550 Gene3D G3DSA:2.60.40.1180 425 549 6.2E-5 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 5.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.0E-39 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 6.0E-129 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 Gene3D G3DSA:3.40.1690.10 218 357 1.3E-55 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 SUPERFAMILY SSF160544 250 353 3.01E-41 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tbd_1245 d04b180c2bc049eaa6dc6c6fb3ecb0b3 390 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 2.2E-127 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1847 2e8523ac4136a7c98986d553d0ddd3d4 190 SUPERFAMILY SSF56235 2 187 3.65E-20 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1847 2e8523ac4136a7c98986d553d0ddd3d4 190 Gene3D G3DSA:3.60.20.10 2 184 2.9E-21 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 162 178 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 204 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 299 316 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 264 282 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 230 248 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 215 229 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 PRINTS PR01486 Bacterial phospholipase A1 protein signature 321 341 1.9E-36 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 Gene3D G3DSA:2.40.230.10 96 350 4.8E-91 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 SUPERFAMILY SSF56931 92 349 9.15E-92 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_0096 244366d9a21b1ab658d29302551fbf41 352 Pfam PF02253 Phospholipase A1 90 348 3.4E-104 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Tbd_2272 f3ac0196ac473a0efe0f08b3806657ad 423 Gene3D G3DSA:3.40.190.10 142 412 1.8E-126 T 11-10-2018 Tbd_2272 f3ac0196ac473a0efe0f08b3806657ad 423 Gene3D G3DSA:3.40.190.10 56 407 1.8E-126 T 11-10-2018 Tbd_2272 f3ac0196ac473a0efe0f08b3806657ad 423 Pfam PF13379 NMT1-like family 49 298 5.3E-108 T 11-10-2018 Tbd_2272 f3ac0196ac473a0efe0f08b3806657ad 423 SUPERFAMILY SSF53850 53 291 7.47E-31 T 11-10-2018 Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 Pfam PF01230 HIT domain 68 160 1.1E-22 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 SUPERFAMILY SSF54197 60 171 1.56E-38 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 ProSitePatterns PS00892 HIT domain signature. 139 157 - T 11-10-2018 IPR019808 Histidine triad, conserved site Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 Gene3D G3DSA:3.30.428.10 37 175 6.2E-41 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 PRINTS PR00332 Histidine triad family signature 79 97 3.8E-6 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_1576 86f4ec1195cfab343ff4c1bd052ed4a7 182 PRINTS PR00332 Histidine triad family signature 146 156 3.8E-6 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 Gene3D G3DSA:3.40.50.10890 230 414 1.1E-140 T 11-10-2018 Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 Gene3D G3DSA:3.60.15.10 6 447 1.1E-140 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 SUPERFAMILY SSF56281 1 473 1.44E-126 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 SMART SM00849 13 242 4.2E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 Pfam PF10996 Beta-Casp domain 263 388 5.2E-21 T 11-10-2018 IPR022712 Beta-Casp domain Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 Pfam PF00753 Metallo-beta-lactamase superfamily 13 208 5.0E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 SMART SM01027 263 388 6.9E-49 T 11-10-2018 IPR022712 Beta-Casp domain Tbd_0095 ade69d432761399cad33ed62b8555dd1 474 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 402 465 9.1E-16 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Tbd_1402 1e78d1729e0d352133c9239f5d36c6aa 558 Gene3D G3DSA:1.20.1250.20 16 260 4.7E-72 T 11-10-2018 Tbd_1402 1e78d1729e0d352133c9239f5d36c6aa 558 SUPERFAMILY SSF103473 44 552 1.83E-24 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1402 1e78d1729e0d352133c9239f5d36c6aa 558 Gene3D G3DSA:1.20.1250.20 328 557 3.0E-60 T 11-10-2018 Tbd_1402 1e78d1729e0d352133c9239f5d36c6aa 558 Pfam PF07690 Major Facilitator Superfamily 41 189 9.7E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_2135 1bc572c6bcd096c5f407fb7980027afb 78 Pfam PF10276 Zinc-finger domain 44 67 2.2E-6 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2135 1bc572c6bcd096c5f407fb7980027afb 78 Gene3D G3DSA:2.60.260.40 16 70 3.8E-9 T 11-10-2018 Tbd_0909 ea025a0a2df213c19acde6ec8d2a7b50 711 Gene3D G3DSA:2.40.170.20 162 711 1.1E-80 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_0909 ea025a0a2df213c19acde6ec8d2a7b50 711 SUPERFAMILY SSF56935 20 711 4.27E-110 T 11-10-2018 Tbd_0909 ea025a0a2df213c19acde6ec8d2a7b50 711 Pfam PF00593 TonB dependent receptor 220 709 4.4E-44 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_0909 ea025a0a2df213c19acde6ec8d2a7b50 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 150 7.8E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_0909 ea025a0a2df213c19acde6ec8d2a7b50 711 Gene3D G3DSA:2.170.130.10 20 161 1.9E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_0657 3f5a07bbf947d5a9b59adf5275ca88df 106 SUPERFAMILY SSF69118 6 104 3.01E-18 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tbd_0657 3f5a07bbf947d5a9b59adf5275ca88df 106 Pfam PF02627 Carboxymuconolactone decarboxylase family 20 99 8.9E-15 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tbd_0657 3f5a07bbf947d5a9b59adf5275ca88df 106 Gene3D G3DSA:1.20.1290.10 2 102 3.3E-17 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tbd_2179 231c1c3ddcbe6afccce1b45aa9a48f40 68 Pfam PF11127 Protein of unknown function (DUF2892) 2 57 1.1E-15 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_0286 7b57cdfb3138b564b38d07fa5ced2b2b 371 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 354 3.7E-107 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tbd_0286 7b57cdfb3138b564b38d07fa5ced2b2b 371 SUPERFAMILY SSF53756 1 358 2.45E-113 T 11-10-2018 Tbd_0286 7b57cdfb3138b564b38d07fa5ced2b2b 371 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 354 1.9E-88 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Tbd_0286 7b57cdfb3138b564b38d07fa5ced2b2b 371 Gene3D G3DSA:3.40.50.2000 195 335 7.9E-50 T 11-10-2018 Tbd_0286 7b57cdfb3138b564b38d07fa5ced2b2b 371 Gene3D G3DSA:3.40.50.2000 3 194 2.0E-75 T 11-10-2018 Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 Gene3D G3DSA:3.40.50.300 148 330 4.0E-42 T 11-10-2018 Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 SUPERFAMILY SSF52540 152 344 1.84E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 SMART SM00962 154 342 2.3E-34 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 Gene3D G3DSA:1.20.120.1380 122 147 4.0E-42 T 11-10-2018 Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 58 242 2.6E-55 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 SMART SM00382 153 296 5.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1178 a90399ba0afb81bdaba239cc598358da 375 Pfam PF00448 SRP54-type protein, GTPase domain 157 341 1.8E-27 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tbd_2695 b7df9c8061798dd10956a49beccd49db 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 176 6.9E-33 T 11-10-2018 Tbd_2695 b7df9c8061798dd10956a49beccd49db 217 SUPERFAMILY SSF53335 1 178 2.43E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2695 b7df9c8061798dd10956a49beccd49db 217 Gene3D G3DSA:3.40.50.150 1 210 3.5E-50 T 11-10-2018 Tbd_2152 7f9da47bfea800923b298b0c98613066 108 SUPERFAMILY SSF54534 2 107 8.64E-46 T 11-10-2018 Tbd_2152 7f9da47bfea800923b298b0c98613066 108 Gene3D G3DSA:3.10.50.40 1 108 1.5E-48 T 11-10-2018 Tbd_2152 7f9da47bfea800923b298b0c98613066 108 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 16 105 7.1E-39 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 7.8E-139 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 SUPERFAMILY SSF51569 11 335 5.27E-143 T 11-10-2018 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 Gene3D G3DSA:3.20.20.70 6 336 5.0E-144 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 SMART SM01004 12 334 2.2E-236 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.8E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_0189 c4bde8b443c576d4dc2216708a6c57f6 336 PIRSF PIRSF001415 6 336 9.1E-147 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tbd_2325 923f50cda652f834b09c4397dc75651c 285 Pfam PF04982 HPP family 67 188 1.8E-39 T 11-10-2018 IPR007065 HPP Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Gene3D G3DSA:3.40.50.970 404 613 1.2E-66 T 11-10-2018 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 47 208 1.9E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 435 583 1.6E-50 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 SUPERFAMILY SSF52518 44 225 7.07E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Gene3D G3DSA:3.40.50.970 41 227 1.1E-68 T 11-10-2018 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 236 371 2.3E-45 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 SUPERFAMILY SSF52518 413 610 1.24E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 SUPERFAMILY SSF52467 229 403 2.13E-64 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 47 609 2.4E-255 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tbd_1991 e0dd9b5d66ca1ed55a733b4c74ecb00d 613 Gene3D G3DSA:3.40.50.1220 230 402 1.0E-61 T 11-10-2018 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 SUPERFAMILY SSF52518 388 581 3.71E-29 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 PIRSF PIRSF017245 14 745 1.2E-157 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 SMART SM00861 395 583 0.0019 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 Gene3D G3DSA:3.40.50.970 52 361 2.0E-36 T 11-10-2018 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 SUPERFAMILY SSF52922 589 740 1.41E-10 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 Pfam PF09364 XFP N-terminal domain 109 260 8.3E-5 T 11-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 443 565 1.6E-11 T 11-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 Gene3D G3DSA:3.40.50.970 397 597 3.3E-35 T 11-10-2018 Tbd_0049 6768ff478fc695746e5b957a4fca54c7 745 SUPERFAMILY SSF52518 61 361 1.71E-30 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Tbd_2586 26d057aa4bde748622b32caacd2b1ee3 146 Pfam PF00692 dUTPase 13 144 4.3E-38 T 11-10-2018 IPR029054 dUTPase-like Tbd_2586 26d057aa4bde748622b32caacd2b1ee3 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 145 4.7E-47 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Tbd_2586 26d057aa4bde748622b32caacd2b1ee3 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 3 145 33.139 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Tbd_2586 26d057aa4bde748622b32caacd2b1ee3 146 SUPERFAMILY SSF51283 3 145 2.09E-49 T 11-10-2018 IPR036157 dUTPase-like superfamily Tbd_2586 26d057aa4bde748622b32caacd2b1ee3 146 Gene3D G3DSA:2.70.40.10 1 145 6.4E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily Tbd_2448 e7f45ed1f96a6985b362f8f13c656044 83 Pfam PF02597 ThiS family 4 78 2.8E-8 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tbd_2448 e7f45ed1f96a6985b362f8f13c656044 83 SUPERFAMILY SSF54285 1 77 3.92E-11 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tbd_2448 e7f45ed1f96a6985b362f8f13c656044 83 Gene3D G3DSA:3.10.20.30 1 79 1.4E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_0291 3b6be6839eb347d50276309932d9c946 382 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 3 370 1.9E-176 T 11-10-2018 IPR017522 Sugar transferase, PEP-CTERM, Stp2 Tbd_0291 3b6be6839eb347d50276309932d9c946 382 Gene3D G3DSA:3.40.50.2000 15 362 2.8E-66 T 11-10-2018 Tbd_0291 3b6be6839eb347d50276309932d9c946 382 Pfam PF13439 Glycosyltransferase Family 4 15 171 2.5E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_0291 3b6be6839eb347d50276309932d9c946 382 Pfam PF13692 Glycosyl transferases group 1 192 332 1.7E-29 T 11-10-2018 Tbd_0291 3b6be6839eb347d50276309932d9c946 382 SUPERFAMILY SSF53756 4 373 9.11E-78 T 11-10-2018 Tbd_0291 3b6be6839eb347d50276309932d9c946 382 Gene3D G3DSA:3.40.50.2000 170 353 2.8E-66 T 11-10-2018 Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 Pfam PF13356 Arm DNA-binding domain 13 104 2.0E-12 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 Gene3D G3DSA:3.30.160.390 3 124 2.2E-16 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 Gene3D G3DSA:1.10.443.10 241 433 1.1E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 Pfam PF00589 Phage integrase family 261 411 2.0E-16 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 Gene3D G3DSA:1.10.150.130 125 237 9.7E-11 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Tbd_2675 a4f103783e0b8412871599dd5044e31e 443 SUPERFAMILY SSF56349 129 420 3.24E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_0981 c2a50bbe687535e7c6bf413848fff211 177 Gene3D G3DSA:2.30.30.40 26 84 5.3E-9 T 11-10-2018 Tbd_0981 c2a50bbe687535e7c6bf413848fff211 177 Pfam PF06347 Bacterial SH3 domain 34 76 4.3E-8 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 SUPERFAMILY SSF51604 140 423 2.69E-131 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 1.6E-131 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 Pfam PF03952 Enolase, N-terminal domain 4 134 3.8E-61 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 Hamap MF_00318 Enolase [eno]. 2 411 45.385 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 Gene3D G3DSA:3.30.390.10 1 127 4.0E-58 T 11-10-2018 IPR029017 Enolase-like, N-terminal Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 6.2E-212 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 Gene3D G3DSA:3.20.20.120 128 426 1.8E-134 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 SMART SM01192 139 425 9.9E-224 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 334 348 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 107 123 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 311 322 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 161 174 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 363 380 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PRINTS PR00148 Enolase signature 37 51 2.8E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 SMART SM01193 4 134 8.9E-99 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 PIRSF PIRSF001400 1 425 1.2E-193 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tbd_0621 99510238d5ef74cdc0d4f167fc4d0e60 427 SUPERFAMILY SSF54826 3 137 3.09E-58 T 11-10-2018 Tbd_1236 f4797a155e9adcb7dfd34bde61887a3d 102 Gene3D G3DSA:3.30.1390.10 2 102 1.4E-43 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tbd_1236 f4797a155e9adcb7dfd34bde61887a3d 102 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 19 98 1.8E-35 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Tbd_1236 f4797a155e9adcb7dfd34bde61887a3d 102 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 15 97 29.316 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Tbd_1236 f4797a155e9adcb7dfd34bde61887a3d 102 SUPERFAMILY SSF54736 17 101 4.87E-34 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 SUPERFAMILY SSF69721 8 106 2.22E-33 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 Pfam PF04358 DsrC like protein 12 106 7.0E-33 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 Gene3D G3DSA:3.30.1420.10 10 40 3.4E-8 T 11-10-2018 Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 PIRSF PIRSF006223 2 108 3.6E-33 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 12 106 1.8E-29 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2327 202b6b2545ac7f2eeb09c717301b2fdd 111 Gene3D G3DSA:1.10.10.370 41 107 2.1E-25 T 11-10-2018 Tbd_0762 7c77c49cf9712e7ca2de0c06a29dc45d 218 Pfam PF04612 Type II secretion system (T2SS), protein M 7 98 3.7E-9 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Tbd_1157 e984edb051cb8e8013b474253e3e3926 74 Gene3D G3DSA:3.10.290.10 1 72 2.1E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_1157 e984edb051cb8e8013b474253e3e3926 74 Pfam PF13275 S4 domain 8 71 2.7E-22 T 11-10-2018 Tbd_1157 e984edb051cb8e8013b474253e3e3926 74 SUPERFAMILY SSF55174 3 71 7.33E-19 T 11-10-2018 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 12 618 0.0 T 11-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 Pfam PF00890 FAD binding domain 12 241 6.0E-18 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 Pfam PF02910 Fumarate reductase flavoprotein C-term 499 613 6.6E-7 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 Gene3D G3DSA:3.90.700.10 264 393 3.1E-262 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 SUPERFAMILY SSF46977 486 618 1.24E-40 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 SUPERFAMILY SSF56425 239 382 6.07E-55 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 PIRSF PIRSF000171 1 622 5.3E-243 T 11-10-2018 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 Gene3D G3DSA:3.50.50.90 10 617 3.1E-262 T 11-10-2018 Tbd_2282 9f2a18a03059e088efecef1c28d27a6a 622 SUPERFAMILY SSF51905 5 476 1.74E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2594 321a0abcbe656c12a99ce2c1febdeca3 390 Pfam PF01610 Transposase 273 384 1.2E-10 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Tbd_2594 321a0abcbe656c12a99ce2c1febdeca3 390 Pfam PF00487 Fatty acid desaturase 10 212 7.7E-13 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 SUPERFAMILY SSF48452 177 294 8.65E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 Gene3D G3DSA:3.90.70.10 31 168 5.9E-11 T 11-10-2018 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 Gene3D G3DSA:1.25.40.10 169 300 2.3E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 SMART SM00028 245 278 6.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 SMART SM00028 211 244 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 SMART SM00028 177 210 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 Pfam PF13432 Tetratricopeptide repeat 181 244 4.9E-10 T 11-10-2018 Tbd_1110 82080ded38c9c1d01768066a7385224b 312 Pfam PF13529 Peptidase_C39 like family 26 135 1.8E-10 T 11-10-2018 IPR039564 Peptidase C39-like Tbd_0023 cb1928d2b668a75dffdca0e5469f5e6d 111 Gene3D G3DSA:1.25.40.10 1 108 1.8E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0023 cb1928d2b668a75dffdca0e5469f5e6d 111 Pfam PF13432 Tetratricopeptide repeat 23 78 1.8E-10 T 11-10-2018 Tbd_0023 cb1928d2b668a75dffdca0e5469f5e6d 111 SMART SM00028 18 51 4.3E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0023 cb1928d2b668a75dffdca0e5469f5e6d 111 SMART SM00028 52 85 0.66 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0023 cb1928d2b668a75dffdca0e5469f5e6d 111 SUPERFAMILY SSF48452 3 82 9.87E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2804 3dfe5265daa977a6cb67409edc5604e9 129 Pfam PF03899 ATP synthase I chain 16 112 9.9E-6 T 11-10-2018 IPR005598 ATP synthase protein I Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 Pfam PF01544 CorA-like Mg2+ transporter protein 32 319 6.9E-57 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 Gene3D G3DSA:3.30.460.20 3 133 1.0E-25 T 11-10-2018 Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 Gene3D G3DSA:1.20.58.340 134 245 3.0E-23 T 11-10-2018 Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 SUPERFAMILY SSF143865 5 256 1.09E-55 T 11-10-2018 Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 Gene3D G3DSA:1.20.58.340 247 323 2.9E-19 T 11-10-2018 Tbd_2140 68bc03e4b0dca1a4b5b53482bb3e51e8 323 SUPERFAMILY SSF144083 258 320 1.26E-15 T 11-10-2018 Tbd_0907 cd12275c21ef2d24023e760d21f51acb 395 Gene3D G3DSA:2.120.10.10 41 206 8.6E-10 T 11-10-2018 Tbd_0907 cd12275c21ef2d24023e760d21f51acb 395 SUPERFAMILY SSF50939 47 379 3.92E-20 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-25 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.8E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.8E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.8E-17 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 SUPERFAMILY SSF143034 2 64 2.62E-23 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.787 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 Pfam PF01632 Ribosomal protein L35 2 62 5.8E-25 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_1009 019b8566a6e575edada2d40717789a2e 65 Gene3D G3DSA:2.40.50.530 4 64 6.3E-21 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 Pfam PF10135 Rod binding protein 51 97 2.9E-18 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 13 289 2.0E-100 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 Gene3D G3DSA:1.10.530.10 148 288 4.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 Gene3D G3DSA:2.10.70.40 182 234 4.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 7 27 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 209 230 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 231 252 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 167 185 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 29 52 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 54 74 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 187 208 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 143 166 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 PRINTS PR01002 Flagellar protein FlgJ signature 274 292 1.1E-48 T 11-10-2018 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 154 291 1.3E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Tbd_1629 16c167b0b7ee4b53d4d69e76812bf7f5 294 SMART SM00047 140 292 2.0E-38 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Tbd_0222 30d817d456bd9be738992e59ebafbdde 217 Gene3D G3DSA:3.40.50.300 28 144 6.3E-19 T 11-10-2018 Tbd_0222 30d817d456bd9be738992e59ebafbdde 217 Gene3D G3DSA:1.10.8.60 147 212 3.7E-22 T 11-10-2018 Tbd_0222 30d817d456bd9be738992e59ebafbdde 217 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 3 212 3.5E-67 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 Tbd_0222 30d817d456bd9be738992e59ebafbdde 217 SUPERFAMILY SSF52540 27 192 4.53E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0222 30d817d456bd9be738992e59ebafbdde 217 Pfam PF00308 Bacterial dnaA protein 95 188 4.3E-5 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Tbd_2731 e044097a320aee5e619b962364e6a2ee 283 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 159 171 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tbd_2731 e044097a320aee5e619b962364e6a2ee 283 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 26 282 19.997 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tbd_2731 e044097a320aee5e619b962364e6a2ee 283 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 29 276 7.5E-79 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tbd_2731 e044097a320aee5e619b962364e6a2ee 283 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 24 282 3.5E-81 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 391 7.5E-17 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 PRINTS PR00812 Bacterial general secretion pathway protein F signature 56 68 7.5E-17 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 PRINTS PR00812 Bacterial general secretion pathway protein F signature 356 370 7.5E-17 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 PRINTS PR00812 Bacterial general secretion pathway protein F signature 154 182 7.5E-17 T 11-10-2018 IPR003004 GspF/PilC family Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 Gene3D G3DSA:1.20.81.30 245 352 2.0E-20 T 11-10-2018 Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 Pfam PF00482 Type II secretion system (T2SS), protein F 60 182 5.4E-26 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 Pfam PF00482 Type II secretion system (T2SS), protein F 262 383 5.6E-22 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_1433 2bf7f981b6137c0830f545e85c4d2608 392 Gene3D G3DSA:1.20.81.30 56 161 1.2E-21 T 11-10-2018 Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 136 165 20.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 277 298 320.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 300 337 2800.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 188 209 1500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 232 254 650.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 114 135 780.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 255 276 34.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 84 112 400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00710 166 187 2100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00722 192 351 22.0 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SMART SM00722 46 186 5.2E-9 T 11-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 Gene3D G3DSA:2.160.20.10 14 275 2.5E-27 T 11-10-2018 IPR012334 Pectin lyase fold Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 Pfam PF05048 Periplasmic copper-binding protein (NosD) 143 367 5.4E-61 T 11-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 31 404 8.3E-134 T 11-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 SUPERFAMILY SSF51126 24 390 1.52E-67 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Tbd_1391 0ab3e518e3ce2e973d2e5cbfb6621045 422 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 260 291 4.1E-6 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Pfam PF01645 Conserved region in glutamate synthase 800 1164 6.1E-154 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 SUPERFAMILY SSF51395 453 1196 3.08E-253 T 11-10-2018 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Pfam PF00310 Glutamine amidotransferases class-II 21 435 6.6E-163 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Pfam PF04898 Glutamate synthase central domain 464 744 9.6E-104 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Pfam PF01493 GXGXG motif 1244 1429 4.2E-79 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Gene3D G3DSA:3.60.20.10 21 552 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 SUPERFAMILY SSF69336 1221 1474 3.4E-86 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 SUPERFAMILY SSF56235 21 437 6.09E-141 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Gene3D G3DSA:3.20.20.70 490 1178 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Gene3D G3DSA:3.20.20.70 440 799 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2767 473e74bfcde662ac8d66011019acfff0 1494 Gene3D G3DSA:2.160.20.60 1217 1484 2.0E-99 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Tbd_0303 106f6c67fbe79e9bd27c004aa3ed1eca 287 Gene3D G3DSA:3.90.550.10 3 173 1.2E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0303 106f6c67fbe79e9bd27c004aa3ed1eca 287 Pfam PF00535 Glycosyl transferase family 2 10 125 1.8E-7 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0303 106f6c67fbe79e9bd27c004aa3ed1eca 287 SUPERFAMILY SSF53448 10 226 8.63E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1077 962e0810cc31d762fc14a14f93a291a0 448 Gene3D G3DSA:3.30.565.60 215 381 2.2E-35 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily Tbd_1077 962e0810cc31d762fc14a14f93a291a0 448 Pfam PF04326 Putative DNA-binding domain 5 120 2.8E-15 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Tbd_1077 962e0810cc31d762fc14a14f93a291a0 448 Gene3D G3DSA:3.30.950.30 4 120 1.4E-17 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily Tbd_1077 962e0810cc31d762fc14a14f93a291a0 448 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 291 377 1.6E-18 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Tbd_1360 88172ad30de0b44bcee869c02aa1a34f 401 Pfam PF12704 MacB-like periplasmic core domain 19 256 8.1E-13 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Tbd_1360 88172ad30de0b44bcee869c02aa1a34f 401 Pfam PF02687 FtsX-like permease family 312 395 1.4E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_0250 2e841f552a5fcc2891ab6e691c6d08f6 225 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 47 200 1.1E-14 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Tbd_0250 2e841f552a5fcc2891ab6e691c6d08f6 225 Gene3D G3DSA:3.40.50.10610 31 215 9.4E-32 T 11-10-2018 Tbd_0250 2e841f552a5fcc2891ab6e691c6d08f6 225 SUPERFAMILY SSF159594 44 207 5.23E-30 T 11-10-2018 Tbd_0262 66fc1d960f2b58c2844506d3e3140387 166 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 149 8.8E-22 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Tbd_0262 66fc1d960f2b58c2844506d3e3140387 166 Pfam PF04093 rod shape-determining protein MreD 18 122 1.8E-14 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Tbd_0262 66fc1d960f2b58c2844506d3e3140387 166 PIRSF PIRSF018472 3 161 4.8E-34 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Tbd_2543 4c8c7884f6f24efdb35708f27d090ee2 179 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 16 174 2.2E-59 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Tbd_2543 4c8c7884f6f24efdb35708f27d090ee2 179 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 179 87.47 T 11-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Tbd_2543 4c8c7884f6f24efdb35708f27d090ee2 179 Pfam PF03350 Uncharacterized protein family, UPF0114 22 138 2.7E-40 T 11-10-2018 IPR005134 Uncharacterised protein family UPF0114 Tbd_0475 418b17b4c989be83d9012862980f376a 314 SMART SM00220 18 289 4.0E-37 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tbd_0475 418b17b4c989be83d9012862980f376a 314 SUPERFAMILY SSF56112 15 284 1.27E-56 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_0475 418b17b4c989be83d9012862980f376a 314 Gene3D G3DSA:1.10.510.10 12 310 2.0E-53 T 11-10-2018 Tbd_0475 418b17b4c989be83d9012862980f376a 314 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 156 168 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Tbd_0475 418b17b4c989be83d9012862980f376a 314 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 24 46 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Tbd_0475 418b17b4c989be83d9012862980f376a 314 Pfam PF00069 Protein kinase domain 18 279 2.6E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tbd_1863 9603442d3babf9589222c5356fac7462 290 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 1.0E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0088 478223e51143e84b10a6f59162d40202 604 Pfam PF00474 Sodium:solute symporter family 33 304 7.8E-35 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tbd_0088 478223e51143e84b10a6f59162d40202 604 Pfam PF00474 Sodium:solute symporter family 408 523 1.3E-15 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tbd_0088 478223e51143e84b10a6f59162d40202 604 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 595 3.1E-258 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily Tbd_0088 478223e51143e84b10a6f59162d40202 604 Gene3D G3DSA:1.20.1730.10 385 584 3.6E-23 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Tbd_0088 478223e51143e84b10a6f59162d40202 604 Gene3D G3DSA:1.20.1730.10 22 327 5.0E-36 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Tbd_1019 2be9f7c6ab6960f95492b4685b14394e 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 474 45.188 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Tbd_1019 2be9f7c6ab6960f95492b4685b14394e 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 456 2.6E-139 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Tbd_1308 e0af4bb69c8267a446700d7e85e03f56 224 Pfam PF04343 Protein of unknown function, DUF488 27 148 1.6E-33 T 11-10-2018 IPR007438 Protein of unknown function DUF488 Tbd_1308 e0af4bb69c8267a446700d7e85e03f56 224 PIRSF PIRSF024492 13 191 1.5E-58 T 11-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 Tbd_1837 853c0c9871e3dae99f0fb1da63e423c6 150 SUPERFAMILY SSF75169 38 150 4.32E-24 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1837 853c0c9871e3dae99f0fb1da63e423c6 150 Gene3D G3DSA:3.40.1260.10 34 150 4.0E-30 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1837 853c0c9871e3dae99f0fb1da63e423c6 150 Pfam PF02635 DsrE/DsrF-like family 47 149 2.8E-13 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_1900 648ee9cceea8296216b06983a30d9b60 270 Gene3D G3DSA:3.40.50.300 4 248 1.4E-62 T 11-10-2018 Tbd_1900 648ee9cceea8296216b06983a30d9b60 270 SMART SM00382 31 245 6.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1900 648ee9cceea8296216b06983a30d9b60 270 SUPERFAMILY SSF52540 6 236 1.21E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1900 648ee9cceea8296216b06983a30d9b60 270 Pfam PF00005 ABC transporter 22 171 8.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1900 648ee9cceea8296216b06983a30d9b60 270 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1509 65bc66c848de931b87e5869996473d44 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 136 2.2E-27 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Tbd_1509 65bc66c848de931b87e5869996473d44 138 Gene3D G3DSA:3.30.420.270 61 132 7.8E-7 T 11-10-2018 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 Gene3D G3DSA:3.40.50.720 129 304 1.1E-129 T 11-10-2018 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 PIRSF PIRSF000183 1 360 1.1E-133 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 SUPERFAMILY SSF51735 136 302 1.41E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 358 8.8E-134 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 Gene3D G3DSA:3.40.50.720 3 350 1.1E-129 T 11-10-2018 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 SMART SM01002 148 296 1.7E-75 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 SMART SM01003 4 136 1.1E-69 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 SUPERFAMILY SSF52283 1 354 3.49E-61 T 11-10-2018 Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 350 7.7E-73 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tbd_0644 d2626643971b25f4890a9c356cedfa57 360 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.9E-44 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tbd_1274 723abdd2ebe78c9df2c12a4e043e4fd3 430 Gene3D G3DSA:1.20.1250.20 15 413 8.5E-28 T 11-10-2018 Tbd_1274 723abdd2ebe78c9df2c12a4e043e4fd3 430 SUPERFAMILY SSF103473 27 420 1.44E-38 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1274 723abdd2ebe78c9df2c12a4e043e4fd3 430 Pfam PF11700 Vacuole effluxer Atg22 like 59 422 1.3E-38 T 11-10-2018 IPR024671 Autophagy-related protein 22-like Tbd_2239 2f00b42ba59cdf3cf0282a169f6baee9 57 PIRSF PIRSF036466 1 55 4.4E-20 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2239 2f00b42ba59cdf3cf0282a169f6baee9 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 19.793 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_2239 2f00b42ba59cdf3cf0282a169f6baee9 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 43 5.6E-14 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Tbd_1763 ec2136e489240d0d4e31d3500722c3df 334 Gene3D G3DSA:3.30.70.2130 130 208 4.8E-7 T 11-10-2018 Tbd_1763 ec2136e489240d0d4e31d3500722c3df 334 PIRSF PIRSF015283 1 333 5.2E-72 T 11-10-2018 IPR016631 Regulatory, RpfE Tbd_0670 560ec75d25805a381d7157637d4015db 265 SMART SM00421 167 224 1.5E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 Gene3D G3DSA:3.40.50.12740 19 228 2.3E-29 T 11-10-2018 Tbd_0670 560ec75d25805a381d7157637d4015db 265 SUPERFAMILY SSF46894 160 225 8.5E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 ProSitePatterns PS00622 LuxR-type HTH domain signature. 184 211 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 169 223 2.6E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 200 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 184 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 200 212 1.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tbd_0670 560ec75d25805a381d7157637d4015db 265 SUPERFAMILY SSF52172 18 142 7.93E-7 T 11-10-2018 IPR011006 CheY-like superfamily Tbd_0955 9eefcfa715fa1b35522ef73c5efdb6ff 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 217 3.0E-70 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tbd_0955 9eefcfa715fa1b35522ef73c5efdb6ff 225 Pfam PF02224 Cytidylate kinase 12 219 3.7E-70 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tbd_0955 9eefcfa715fa1b35522ef73c5efdb6ff 225 Gene3D G3DSA:3.40.50.300 5 224 1.5E-74 T 11-10-2018 Tbd_0955 9eefcfa715fa1b35522ef73c5efdb6ff 225 SUPERFAMILY SSF52540 9 221 4.51E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0955 9eefcfa715fa1b35522ef73c5efdb6ff 225 Hamap MF_00238 Cytidylate kinase [cmk]. 9 223 32.044 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tbd_0445 f4963e149d138a0c14752ba89545a9ac 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 28 240 5.0E-12 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tbd_0445 f4963e149d138a0c14752ba89545a9ac 251 SUPERFAMILY SSF56219 3 247 5.23E-48 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_0445 f4963e149d138a0c14752ba89545a9ac 251 Gene3D G3DSA:3.60.10.10 3 250 1.6E-40 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_1988 8e3929885703ea223c3a274dbbe39237 208 Pfam PF02666 Phosphatidylserine decarboxylase 40 205 4.0E-34 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Tbd_1988 8e3929885703ea223c3a274dbbe39237 208 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 5 207 2.2E-70 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Tbd_1988 8e3929885703ea223c3a274dbbe39237 208 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 5 208 35.732 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Tbd_2069 94c8c461941fb98da724dd217dd05808 257 Gene3D G3DSA:1.10.10.10 16 104 1.0E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2602 782f98dc05874e4e652052b252f318c0 325 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 9 317 1.7E-123 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Tbd_2602 782f98dc05874e4e652052b252f318c0 325 Pfam PF03741 Integral membrane protein TerC family 83 286 7.4E-57 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Tbd_1081 53fcbf7d955e9b12e899418b0e0fa8d6 309 Pfam PF00149 Calcineurin-like phosphoesterase 54 253 4.6E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_1081 53fcbf7d955e9b12e899418b0e0fa8d6 309 Gene3D G3DSA:3.60.21.10 53 287 1.3E-18 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_1081 53fcbf7d955e9b12e899418b0e0fa8d6 309 SUPERFAMILY SSF56300 54 291 3.48E-34 T 11-10-2018 Tbd_1724 15c6dad0e910540a744c1bd42b00c171 160 Pfam PF00583 Acetyltransferase (GNAT) family 26 132 3.2E-12 T 11-10-2018 IPR000182 GNAT domain Tbd_1724 15c6dad0e910540a744c1bd42b00c171 160 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 23 154 1.2E-35 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Tbd_1724 15c6dad0e910540a744c1bd42b00c171 160 SUPERFAMILY SSF55729 15 158 3.77E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_1724 15c6dad0e910540a744c1bd42b00c171 160 Gene3D G3DSA:3.40.630.30 14 159 4.6E-43 T 11-10-2018 Tbd_0829 ee636e97b0a1eb86f93e22ed7819dfb1 467 Gene3D G3DSA:3.30.70.270 13 145 3.3E-6 T 11-10-2018 Tbd_0829 ee636e97b0a1eb86f93e22ed7819dfb1 467 Pfam PF00817 impB/mucB/samB family 24 148 1.2E-9 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tbd_0829 ee636e97b0a1eb86f93e22ed7819dfb1 467 SUPERFAMILY SSF56672 10 225 2.0E-33 T 11-10-2018 Tbd_0829 ee636e97b0a1eb86f93e22ed7819dfb1 467 Gene3D G3DSA:2.30.40.20 18 70 3.3E-6 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 Gene3D G3DSA:1.10.287.470 83 154 1.1E-66 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 SUPERFAMILY SSF111369 42 268 3.53E-28 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 Gene3D G3DSA:2.40.30.170 37 268 1.1E-66 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 Gene3D G3DSA:2.40.420.20 25 325 1.1E-66 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 330 1.8E-59 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_2396 4b99387be098b294a8398578a78aff91 346 Gene3D G3DSA:2.40.50.100 49 189 1.1E-66 T 11-10-2018 Tbd_2396 4b99387be098b294a8398578a78aff91 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 262 6.7E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tbd_0898 13b2c354c2b4aa32582675ea3b86b129 303 Pfam PF08241 Methyltransferase domain 106 220 6.6E-12 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_0898 13b2c354c2b4aa32582675ea3b86b129 303 SUPERFAMILY SSF53335 89 280 1.94E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0898 13b2c354c2b4aa32582675ea3b86b129 303 Gene3D G3DSA:3.40.50.150 65 286 3.9E-24 T 11-10-2018 Tbd_1779 eb8f3c9ed6eda6771916e438cf9f427f 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 3.3E-157 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Tbd_1779 eb8f3c9ed6eda6771916e438cf9f427f 293 Pfam PF00483 Nucleotidyl transferase 4 240 3.5E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tbd_1779 eb8f3c9ed6eda6771916e438cf9f427f 293 Gene3D G3DSA:3.90.550.10 1 293 3.8E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1779 eb8f3c9ed6eda6771916e438cf9f427f 293 SUPERFAMILY SSF53448 1 289 6.76E-91 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0972 6b9fcf1bc215c2b2f3942fb9763a1960 439 SUPERFAMILY SSF109604 251 429 2.29E-16 T 11-10-2018 Tbd_0972 6b9fcf1bc215c2b2f3942fb9763a1960 439 Pfam PF08668 HDOD domain 251 354 2.1E-6 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_0972 6b9fcf1bc215c2b2f3942fb9763a1960 439 Gene3D G3DSA:1.10.3210.10 233 423 7.7E-9 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:1.20.1330.10 45 411 3.2E-89 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 SUPERFAMILY SSF64518 351 609 4.18E-37 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 SUPERFAMILY SSF64518 1 366 5.23E-68 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:2.170.280.10 178 394 3.2E-89 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 3.5E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:2.30.220.10 189 288 3.2E-89 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 PRINTS PR00207 Flagellin signature 37 54 2.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 PRINTS PR00207 Flagellin signature 76 95 2.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 PRINTS PR00207 Flagellin signature 111 134 2.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:1.10.8.410 561 609 3.8E-25 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:1.20.1330.10 444 560 2.0E-17 T 11-10-2018 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Pfam PF00700 Bacterial flagellin C-terminal helical region 524 608 1.1E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tbd_1590 7b77676d2cf5849fbe0e29bd88dd0f45 609 Gene3D G3DSA:1.20.58.1830 5 33 3.2E-89 T 11-10-2018 Tbd_1087 cf52f4b499094b0969ad826b9d1f59f1 150 SUPERFAMILY SSF53254 2 140 8.77E-21 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_1087 cf52f4b499094b0969ad826b9d1f59f1 150 SMART SM00855 2 106 5.7E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_1087 cf52f4b499094b0969ad826b9d1f59f1 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 67 5.6E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_1087 cf52f4b499094b0969ad826b9d1f59f1 150 Gene3D G3DSA:3.40.50.1240 1 145 8.2E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_2268 5acd118209472aebb53c2110b955702f 283 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 278 3.5E-18 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Tbd_2268 5acd118209472aebb53c2110b955702f 283 SUPERFAMILY SSF74653 195 277 6.67E-20 T 11-10-2018 Tbd_2268 5acd118209472aebb53c2110b955702f 283 Gene3D G3DSA:3.30.1150.10 182 278 1.1E-20 T 11-10-2018 Tbd_2268 5acd118209472aebb53c2110b955702f 283 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 203 277 2.3E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Tbd_2268 5acd118209472aebb53c2110b955702f 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 129 139 3.2E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_2268 5acd118209472aebb53c2110b955702f 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 218 236 3.2E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_2268 5acd118209472aebb53c2110b955702f 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 197 218 3.2E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_2268 5acd118209472aebb53c2110b955702f 283 PRINTS PR01374 Gram-negative bacterial tonB protein signature 237 254 3.2E-11 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Tbd_2751 3d819f4b27bfefc14341dc629d5cc7f3 283 SUPERFAMILY SSF88713 64 272 8.45E-49 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tbd_2751 3d819f4b27bfefc14341dc629d5cc7f3 283 Gene3D G3DSA:3.20.20.370 69 282 9.5E-47 T 11-10-2018 Tbd_2751 3d819f4b27bfefc14341dc629d5cc7f3 283 Pfam PF01522 Polysaccharide deacetylase 79 196 4.8E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tbd_0622 c136e081ce5b15f136ce4082d5184254 114 Hamap MF_00599 Cell division protein FtsB [ftsB]. 16 104 27.418 T 11-10-2018 IPR023081 Cell division protein FtsB Tbd_0622 c136e081ce5b15f136ce4082d5184254 114 Pfam PF04977 Septum formation initiator 27 102 1.0E-20 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 Gene3D G3DSA:2.130.10.10 64 535 3.0E-184 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 SUPERFAMILY SSF49503 513 645 2.21E-30 T 11-10-2018 IPR008972 Cupredoxin Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 SUPERFAMILY SSF50974 65 524 3.14E-118 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 16 645 0.0 T 11-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 Pfam PF13473 Cupredoxin-like domain 552 628 9.3E-8 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain Tbd_1389 5e351b669ce893469a17a770cc0fc1a2 646 Gene3D G3DSA:2.60.40.420 536 646 1.1E-31 T 11-10-2018 IPR008972 Cupredoxin Tbd_0328 dccf781761914e54127e4c72b0c4ed42 182 PIRSF PIRSF005413 2 181 5.1E-61 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0328 dccf781761914e54127e4c72b0c4ed42 182 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 26 167 3.4E-47 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0328 dccf781761914e54127e4c72b0c4ed42 182 SUPERFAMILY SSF110111 49 170 2.88E-44 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0328 dccf781761914e54127e4c72b0c4ed42 182 Gene3D G3DSA:2.60.370.10 48 179 1.6E-43 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0043 3a314c080e9cbef27f0f941ec3d43db2 249 SMART SM00849 12 171 1.7E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0043 3a314c080e9cbef27f0f941ec3d43db2 249 SUPERFAMILY SSF56281 1 228 1.54E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0043 3a314c080e9cbef27f0f941ec3d43db2 249 Pfam PF00753 Metallo-beta-lactamase superfamily 12 171 6.3E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase Tbd_0043 3a314c080e9cbef27f0f941ec3d43db2 249 Gene3D G3DSA:3.60.15.10 1 234 2.9E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0264 91eb65e75f004b9a99c27b2fae0cc7b2 366 Pfam PF01098 Cell cycle protein 21 361 7.7E-103 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0264 91eb65e75f004b9a99c27b2fae0cc7b2 366 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 16 362 6.3E-129 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0264 91eb65e75f004b9a99c27b2fae0cc7b2 366 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 10 364 27.106 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0264 91eb65e75f004b9a99c27b2fae0cc7b2 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0524 2af43263d5bd34cbab07cef435ce349c 187 SUPERFAMILY SSF50475 7 128 6.04E-10 T 11-10-2018 Tbd_0524 2af43263d5bd34cbab07cef435ce349c 187 Gene3D G3DSA:2.30.110.10 5 128 3.2E-16 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tbd_0524 2af43263d5bd34cbab07cef435ce349c 187 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 99 5.8E-7 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 Pfam PF00155 Aminotransferase class I and II 56 308 1.5E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 SUPERFAMILY SSF53383 3 316 1.81E-52 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 186 199 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 Gene3D G3DSA:3.90.1150.10 22 301 1.3E-48 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 Gene3D G3DSA:3.40.640.10 34 234 1.3E-48 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_2715 893da34fa872827079a9d3dce3c25e70 321 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 319 1.4E-111 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Tbd_2529 7d4555d821b12348602338fb31220188 269 SUPERFAMILY SSF52540 62 236 2.96E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2529 7d4555d821b12348602338fb31220188 269 PIRSF PIRSF028756 1 263 4.7E-76 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Tbd_2529 7d4555d821b12348602338fb31220188 269 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 5 261 2.6E-111 T 11-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 Tbd_2529 7d4555d821b12348602338fb31220188 269 Gene3D G3DSA:3.40.50.300 1 266 1.9E-106 T 11-10-2018 Tbd_2529 7d4555d821b12348602338fb31220188 269 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 30 251 6.0E-72 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related Tbd_1095 7618ac8851f674881aa368df046e77a5 241 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 170 185 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 218 230 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 48 241 4.7E-70 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 Pfam PF00813 FliP family 47 237 1.0E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 82 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 82 101 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 215 240 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 170 190 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 43 62 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_1095 7618ac8851f674881aa368df046e77a5 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 191 212 2.4E-57 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tbd_2601 d0ffc1ff3122cbdf680021825e6d0917 352 Pfam PF01594 AI-2E family transporter 16 344 1.7E-32 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Tbd_2485 c64a2245638565479a888ac97a58d55c 433 Gene3D G3DSA:3.30.70.2500 54 158 2.9E-38 T 11-10-2018 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 88 152 2.6E-5 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 428 1.3E-149 T 11-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 161 396 1.6E-33 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 SUPERFAMILY SSF54862 222 318 9.14E-14 T 11-10-2018 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 SUPERFAMILY SSF56014 163 419 5.52E-49 T 11-10-2018 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 Gene3D G3DSA:3.30.413.10 159 413 1.9E-96 T 11-10-2018 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 SUPERFAMILY SSF55124 7 161 2.83E-55 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Tbd_2485 c64a2245638565479a888ac97a58d55c 433 Gene3D G3DSA:3.30.70.20 233 321 1.9E-96 T 11-10-2018 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 Pfam PF04055 Radical SAM superfamily 54 199 4.5E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 Gene3D G3DSA:3.20.20.70 10 317 3.4E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 SMART SM00876 224 316 4.3E-44 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 224 314 5.9E-18 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 SMART SM00729 47 256 2.2E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 PIRSF PIRSF001619 3 316 7.2E-129 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 Hamap MF_01694 Biotin synthase [bioB]. 9 317 41.848 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 SUPERFAMILY SSF102114 11 314 3.27E-88 T 11-10-2018 Tbd_0319 9c5cc91dc1bd1931188532ba873ffbae 317 TIGRFAM TIGR00433 bioB: biotin synthase 19 314 2.1E-121 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tbd_1171 8f08f3360137e384ecf6d3a292839035 190 SUPERFAMILY SSF56925 31 190 1.28E-22 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Tbd_1171 8f08f3360137e384ecf6d3a292839035 190 Gene3D G3DSA:2.40.160.20 16 190 9.5E-41 T 11-10-2018 Tbd_1171 8f08f3360137e384ecf6d3a292839035 190 Pfam PF01389 OmpA-like transmembrane domain 32 190 5.1E-20 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 Tbd_1210 0faf2f23d20d19e315a36afe61b5a77b 155 Pfam PF07799 Protein of unknown function (DUF1643) 14 142 6.8E-41 T 11-10-2018 IPR012441 Protein of unknown function DUF1643 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.468 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.2E-130 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 5.2E-74 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 Gene3D G3DSA:1.10.3730.40 183 338 7.1E-73 T 11-10-2018 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 Gene3D G3DSA:3.40.50.720 1 182 6.8E-78 T 11-10-2018 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 PIRSF PIRSF000116 3 203 3.1E-46 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 PIRSF PIRSF000116 201 332 1.3E-14 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 SUPERFAMILY SSF51735 1 182 1.32E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1989 a438311338bb38c1df584630610e6ef0 338 SUPERFAMILY SSF48179 183 332 8.33E-69 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_1989 a438311338bb38c1df584630610e6ef0 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 3.1E-64 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tbd_0089 2da52953fc1ac50aa568a932114b852f 233 SMART SM00479 41 211 1.4E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_0089 2da52953fc1ac50aa568a932114b852f 233 Gene3D G3DSA:3.30.420.10 35 213 2.9E-33 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0089 2da52953fc1ac50aa568a932114b852f 233 SUPERFAMILY SSF53098 33 210 3.33E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_0089 2da52953fc1ac50aa568a932114b852f 233 Pfam PF00929 Exonuclease 43 202 2.1E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 SUPERFAMILY SSF46689 5 68 1.05E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 Pfam PF16925 Bacterial transcriptional repressor C-terminal 80 182 8.5E-11 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 SUPERFAMILY SSF48498 94 192 1.91E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 Gene3D G3DSA:1.10.357.10 6 195 1.5E-49 T 11-10-2018 Tbd_1255 6b8f562a7274e4d375f26d9cc73d5875 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.3E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_0270 8fec14c2120e7b7ba10f6a021777126c 371 SUPERFAMILY SSF52418 90 367 1.01E-33 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_0270 8fec14c2120e7b7ba10f6a021777126c 371 Pfam PF02885 Glycosyl transferase family, helical bundle domain 16 79 1.7E-6 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_0270 8fec14c2120e7b7ba10f6a021777126c 371 SUPERFAMILY SSF47648 14 84 1.13E-9 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_0270 8fec14c2120e7b7ba10f6a021777126c 371 Gene3D G3DSA:3.40.1030.10 86 371 3.9E-45 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tbd_0270 8fec14c2120e7b7ba10f6a021777126c 371 Gene3D G3DSA:1.20.970.10 13 82 2.1E-11 T 11-10-2018 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 SUPERFAMILY SSF51246 316 382 1.33E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 19 372 1.7E-123 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 Pfam PF02222 ATP-grasp domain 124 292 1.2E-52 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Tbd_2662 e6e473892851701f5f1d12b558d64588 384 Gene3D G3DSA:3.30.1490.20 125 187 5.9E-21 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 SUPERFAMILY SSF56059 115 312 7.07E-61 T 11-10-2018 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 Gene3D G3DSA:3.30.470.20 188 384 8.3E-75 T 11-10-2018 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 SUPERFAMILY SSF52440 9 112 2.73E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tbd_2662 e6e473892851701f5f1d12b558d64588 384 Gene3D G3DSA:3.40.50.20 12 124 2.0E-38 T 11-10-2018 Tbd_2662 e6e473892851701f5f1d12b558d64588 384 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 19 370 41.391 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 SMART SM01350 170 298 1.8E-6 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 301 6.2E-104 T 11-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 Gene3D G3DSA:3.40.50.720 1 168 1.7E-49 T 11-10-2018 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 Gene3D G3DSA:1.10.1040.10 169 301 4.6E-48 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 SUPERFAMILY SSF48179 168 292 2.99E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 170 281 1.1E-23 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 159 187 1.1E-38 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 60 89 1.1E-38 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 1.1E-38 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 113 138 1.1E-38 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 235 262 1.1E-38 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 155 6.9E-39 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Tbd_2123 6c7fd60ca2903b27514d511666e2cad1 302 SUPERFAMILY SSF51735 1 157 1.81E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2522 d46686bc41c18e45c807f8002819298a 287 PIRSF PIRSF026649 1 285 2.1E-73 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tbd_2522 d46686bc41c18e45c807f8002819298a 287 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 276 3.8E-41 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tbd_2425 637ce5e9aed1df484568cd390f839cca 137 PIRSF PIRSF004638 1 137 4.6E-46 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Tbd_2425 637ce5e9aed1df484568cd390f839cca 137 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 137 1.4E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Tbd_1506 21738f6a944ea6bd6ac5b6074ae8a067 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.948 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 Tbd_1506 21738f6a944ea6bd6ac5b6074ae8a067 62 SUPERFAMILY SSF158997 1 54 6.67E-22 T 11-10-2018 Tbd_1506 21738f6a944ea6bd6ac5b6074ae8a067 62 Gene3D G3DSA:2.20.25.10 8 61 1.6E-24 T 11-10-2018 Tbd_1506 21738f6a944ea6bd6ac5b6074ae8a067 62 Pfam PF03966 Trm112p-like protein 3 40 1.3E-11 T 11-10-2018 IPR005651 Trm112-like Tbd_2221 ef7dec6f5a8f141ccf8fb7fd39840298 497 Gene3D G3DSA:3.40.50.300 201 375 9.3E-22 T 11-10-2018 Tbd_2221 ef7dec6f5a8f141ccf8fb7fd39840298 497 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 497 5.2E-231 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal Tbd_2221 ef7dec6f5a8f141ccf8fb7fd39840298 497 SUPERFAMILY SSF52540 18 379 1.71E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2221 ef7dec6f5a8f141ccf8fb7fd39840298 497 Gene3D G3DSA:3.40.50.300 8 115 3.5E-8 T 11-10-2018 Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 SUPERFAMILY SSF75217 1 234 6.54E-93 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 PIRSF PIRSF000386 1 236 1.3E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 Gene3D G3DSA:1.10.1270.20 176 236 7.7E-28 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 236 104.3 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 Gene3D G3DSA:3.40.1280.10 1 175 2.9E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 3.3E-86 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tbd_2375 5a6177e244748584391bdfc65cd1c41b 236 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 1.9E-57 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tbd_2684 866bd54082a18e59dc75fe17bad5b733 234 SMART SM00507 16 72 0.0041 T 11-10-2018 IPR003615 HNH nuclease Tbd_2684 866bd54082a18e59dc75fe17bad5b733 234 Gene3D G3DSA:3.30.40.60 6 83 1.8E-9 T 11-10-2018 Tbd_2684 866bd54082a18e59dc75fe17bad5b733 234 Pfam PF01844 HNH endonuclease 31 76 1.7E-7 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Tbd_1719 5693266418e683e691cbd39337fc7ed8 169 Gene3D G3DSA:3.10.310.50 16 166 1.2E-46 T 11-10-2018 Tbd_1719 5693266418e683e691cbd39337fc7ed8 169 Pfam PF04536 TPM domain 22 143 1.9E-14 T 11-10-2018 IPR007621 TPM domain Tbd_2305 a6a43a9bccff584a7447b3e87732d89a 210 Pfam PF03713 Domain of unknown function (DUF305) 126 201 2.3E-12 T 11-10-2018 IPR005183 Domain of unknown function DUF305 Tbd_2305 a6a43a9bccff584a7447b3e87732d89a 210 Gene3D G3DSA:1.20.1260.10 123 208 1.4E-12 T 11-10-2018 IPR012347 Ferritin-like Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 Gene3D G3DSA:1.10.940.10 1 138 2.0E-30 T 11-10-2018 IPR035926 NusB-like superfamily Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 417 2.3E-109 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 SUPERFAMILY SSF48013 3 142 2.45E-26 T 11-10-2018 IPR035926 NusB-like superfamily Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 306 317 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 307 319 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 242 252 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 357 373 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 227 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 417 5.5E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 Pfam PF01029 NusB family 5 119 1.4E-15 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 Pfam PF01189 16S rRNA methyltransferase RsmB/F 232 416 3.0E-55 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 SUPERFAMILY SSF53335 134 418 1.29E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 Gene3D G3DSA:3.40.50.150 222 418 5.3E-61 T 11-10-2018 Tbd_0016 5ba62981342d1206d67cfc98130bd7b9 418 Gene3D G3DSA:3.30.70.1170 166 221 6.4E-17 T 11-10-2018 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 SUPERFAMILY SSF56322 38 512 1.24E-158 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 50 509 5.5E-169 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 Pfam PF00425 chorismate binding enzyme 248 501 7.0E-98 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 50 199 1.8E-30 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 Gene3D G3DSA:3.60.120.10 19 516 5.4E-179 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 PRINTS PR00095 Anthranilate synthase component I signature 458 472 1.9E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 PRINTS PR00095 Anthranilate synthase component I signature 363 376 1.9E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 PRINTS PR00095 Anthranilate synthase component I signature 443 457 1.9E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_2228 803dfc51e559bc3bfb71aad1d0b45637 521 PRINTS PR00095 Anthranilate synthase component I signature 349 362 1.9E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 Gene3D G3DSA:1.10.240.10 260 365 3.5E-36 T 11-10-2018 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 Pfam PF00579 tRNA synthetases class I (W and Y) 225 308 1.2E-9 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 4.3E-52 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.4E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.4E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.4E-21 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 Gene3D G3DSA:3.40.50.620 1 229 2.9E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.854 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 173 4.8E-59 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tbd_1525 b9546d4e5f8107c242e6959520262eba 400 SUPERFAMILY SSF52374 5 397 2.09E-88 T 11-10-2018 Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 SUPERFAMILY SSF48498 63 178 1.18E-26 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 SUPERFAMILY SSF46689 2 54 3.33E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 41 7.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 Gene3D G3DSA:1.10.357.10 40 181 1.1E-28 T 11-10-2018 Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 Pfam PF08359 YsiA-like protein, C-terminal region 63 175 9.0E-9 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 Gene3D G3DSA:1.10.10.60 1 39 4.3E-8 T 11-10-2018 Tbd_2178 bc94dea529cab510923ca8e9c6635fb9 181 ProSitePatterns PS01081 TetR-type HTH domain signature. 8 39 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tbd_0813 06a2cd5836529dfc96f5fcad59160f53 161 SUPERFAMILY SSF55729 9 160 2.19E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tbd_0813 06a2cd5836529dfc96f5fcad59160f53 161 Pfam PF00583 Acetyltransferase (GNAT) family 52 140 1.3E-15 T 11-10-2018 IPR000182 GNAT domain Tbd_0813 06a2cd5836529dfc96f5fcad59160f53 161 Gene3D G3DSA:3.40.630.30 1 148 9.2E-28 T 11-10-2018 Tbd_0416 9336fb61d685999820874eaf117f8b37 107 SMART SM00739 3 30 4.0E-5 T 11-10-2018 IPR005824 KOW Tbd_0416 9336fb61d685999820874eaf117f8b37 107 Gene3D G3DSA:2.30.30.30 1 104 2.6E-38 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tbd_0416 9336fb61d685999820874eaf117f8b37 107 SUPERFAMILY SSF50104 3 101 6.77E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tbd_0416 9336fb61d685999820874eaf117f8b37 107 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 3.5E-25 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0416 9336fb61d685999820874eaf117f8b37 107 Pfam PF00467 KOW motif 8 39 6.2E-5 T 11-10-2018 IPR005824 KOW Tbd_0416 9336fb61d685999820874eaf117f8b37 107 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 2.7E-38 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0416 9336fb61d685999820874eaf117f8b37 107 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 19.948 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0914 62deaf67823785ba920a32e35cdc3acd 488 Gene3D G3DSA:2.130.10.10 325 478 3.0E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Tbd_0914 62deaf67823785ba920a32e35cdc3acd 488 SUPERFAMILY SSF51004 24 461 3.79E-24 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Tbd_2225 dee2f720a6fadc845469b9cd04404b56 422 SUPERFAMILY SSF51905 151 241 1.23E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2225 dee2f720a6fadc845469b9cd04404b56 422 SUPERFAMILY SSF51905 3 339 1.34E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_2225 dee2f720a6fadc845469b9cd04404b56 422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 308 4.9E-17 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tbd_2225 dee2f720a6fadc845469b9cd04404b56 422 Gene3D G3DSA:3.50.50.100 1 415 1.7E-156 T 11-10-2018 Tbd_0080 94dff59653f8aa0905766dbf9382064d 117 SUPERFAMILY SSF52283 6 101 5.67E-5 T 11-10-2018 Tbd_0080 94dff59653f8aa0905766dbf9382064d 117 Gene3D G3DSA:3.40.50.720 5 117 6.8E-6 T 11-10-2018 Tbd_1878 ff7fbbd5a91171269542ba0eb429afd6 271 Pfam PF01061 ABC-2 type transporter 30 232 1.9E-25 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Tbd_2102 38326921dff9e686c904035883379961 149 Gene3D G3DSA:3.40.5.10 1 50 2.9E-21 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2102 38326921dff9e686c904035883379961 149 Gene3D G3DSA:3.10.430.100 61 148 1.6E-28 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tbd_2102 38326921dff9e686c904035883379961 149 SUPERFAMILY SSF55658 1 55 1.1E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Tbd_2102 38326921dff9e686c904035883379961 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2102 38326921dff9e686c904035883379961 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.07 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2102 38326921dff9e686c904035883379961 149 SUPERFAMILY SSF55653 60 148 1.18E-26 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tbd_2102 38326921dff9e686c904035883379961 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.1E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2102 38326921dff9e686c904035883379961 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.2E-27 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal Tbd_2102 38326921dff9e686c904035883379961 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 3.2E-46 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_2541 722f95088be0493cde6fbe1767d69888 188 PIRSF PIRSF039093 1 180 4.0E-84 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tbd_2541 722f95088be0493cde6fbe1767d69888 188 SUPERFAMILY SSF56235 3 177 3.66E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_2541 722f95088be0493cde6fbe1767d69888 188 Pfam PF00227 Proteasome subunit 5 176 1.0E-21 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Tbd_2541 722f95088be0493cde6fbe1767d69888 188 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 176 1.3E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tbd_2541 722f95088be0493cde6fbe1767d69888 188 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.776 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tbd_2541 722f95088be0493cde6fbe1767d69888 188 Gene3D G3DSA:3.60.20.10 2 178 3.7E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1775 428f33ef8069cc32310b37bda4ee0fab 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 231 8.0E-77 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1775 428f33ef8069cc32310b37bda4ee0fab 327 SUPERFAMILY SSF51735 2 320 1.89E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1775 428f33ef8069cc32310b37bda4ee0fab 327 Gene3D G3DSA:3.40.50.720 7 309 1.9E-106 T 11-10-2018 Tbd_1775 428f33ef8069cc32310b37bda4ee0fab 327 Gene3D G3DSA:3.90.25.10 169 316 1.9E-106 T 11-10-2018 Tbd_1775 428f33ef8069cc32310b37bda4ee0fab 327 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 320 49.209 T 11-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 Tbd_1859 821527b5a783ff313b0831c3bc8caecc 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 90 1.0E-5 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Tbd_1859 821527b5a783ff313b0831c3bc8caecc 145 Gene3D G3DSA:2.40.10.330 74 130 2.1E-28 T 11-10-2018 Tbd_1859 821527b5a783ff313b0831c3bc8caecc 145 SUPERFAMILY SSF54534 6 144 6.48E-25 T 11-10-2018 Tbd_1859 821527b5a783ff313b0831c3bc8caecc 145 Gene3D G3DSA:3.10.50.40 16 142 2.1E-28 T 11-10-2018 Tbd_1897 d2bcbdb952896b784c97df1df6538b6f 453 Pfam PF02321 Outer membrane efflux protein 258 450 2.4E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1897 d2bcbdb952896b784c97df1df6538b6f 453 Pfam PF02321 Outer membrane efflux protein 29 190 3.7E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1897 d2bcbdb952896b784c97df1df6538b6f 453 Gene3D G3DSA:1.20.1600.10 16 452 5.3E-51 T 11-10-2018 Tbd_1897 d2bcbdb952896b784c97df1df6538b6f 453 SUPERFAMILY SSF56954 28 452 3.92E-48 T 11-10-2018 Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 Gene3D G3DSA:3.30.750.140 214 326 1.1E-36 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 Pfam PF02120 Flagellar hook-length control protein FliK 234 316 1.6E-25 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 PRINTS PR01007 Flagellar hook-length control protein signature 24 41 3.7E-13 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 PRINTS PR01007 Flagellar hook-length control protein signature 282 305 3.7E-13 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 PRINTS PR01007 Flagellar hook-length control protein signature 249 267 3.7E-13 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Tbd_1605 91379a2fff27c5c76cf9da9f4d14e980 360 PRINTS PR01007 Flagellar hook-length control protein signature 224 246 3.7E-13 T 11-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 Pfam PF00731 AIR carboxylase 6 153 9.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 SUPERFAMILY SSF52255 6 160 1.96E-64 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 159 1.1E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 PIRSF PIRSF001338 2 162 2.4E-63 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 31.812 T 11-10-2018 IPR033747 Class I PurE Tbd_2661 c02fcef97ad221c036a393115248ecca 165 SMART SM01001 5 156 1.8E-98 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tbd_2661 c02fcef97ad221c036a393115248ecca 165 Gene3D G3DSA:3.40.50.7700 1 165 1.3E-71 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tbd_0675 9ebd6a391b33fee56485b6bed86320ba 432 Pfam PF04230 Polysaccharide pyruvyl transferase 48 353 8.8E-15 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tbd_2118 1deae07334c136e502e9dbcff5556b0e 164 Pfam PF00578 AhpC/TSA family 27 139 8.1E-18 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_2118 1deae07334c136e502e9dbcff5556b0e 164 SUPERFAMILY SSF52833 27 156 5.28E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2118 1deae07334c136e502e9dbcff5556b0e 164 Gene3D G3DSA:3.40.30.10 20 160 3.1E-36 T 11-10-2018 Tbd_2118 1deae07334c136e502e9dbcff5556b0e 164 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tbd_1997 dad746a600475837a7f877afb433d7b6 154 Pfam PF07179 SseB protein N-terminal domain 24 141 5.8E-15 T 11-10-2018 IPR009839 SseB protein N-terminal domain Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 SUPERFAMILY SSF55811 2 163 1.62E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 Pfam PF14803 Nudix N-terminal 2 35 5.7E-17 T 11-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 Pfam PF00293 NUDIX domain 41 116 9.2E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 Gene3D G3DSA:2.20.70.10 1 35 4.7E-18 T 11-10-2018 Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 Gene3D G3DSA:3.90.79.10 36 177 2.5E-41 T 11-10-2018 Tbd_0747 af08b5c40daf67e168cc66cf4e7a4bf9 177 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_1259 81490b927c2bc25c8e2269397a9641f6 221 SUPERFAMILY SSF82861 117 202 8.11E-6 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tbd_1259 81490b927c2bc25c8e2269397a9641f6 221 Pfam PF05552 Conserved TM helix 107 151 4.2E-10 T 11-10-2018 IPR008910 Conserved TM helix Tbd_1259 81490b927c2bc25c8e2269397a9641f6 221 Pfam PF05552 Conserved TM helix 12 58 3.6E-16 T 11-10-2018 IPR008910 Conserved TM helix Tbd_2199 5996e471b896ae90d78717db09bf5599 555 SMART SM00028 495 528 330.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_2199 5996e471b896ae90d78717db09bf5599 555 SMART SM00028 427 460 0.0028 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_2199 5996e471b896ae90d78717db09bf5599 555 SMART SM00028 461 494 0.72 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_2199 5996e471b896ae90d78717db09bf5599 555 Gene3D G3DSA:1.25.40.10 426 522 2.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_2199 5996e471b896ae90d78717db09bf5599 555 SUPERFAMILY SSF48452 426 520 4.05E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1954 acb4021f76fb920ee87f7fe93d640666 183 Pfam PF14366 Domain of unknown function (DUF4410) 50 147 6.2E-18 T 11-10-2018 IPR025522 Protein of unknown function DUF4410 Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 SMART SM00346 8 97 2.0E-23 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 SUPERFAMILY SSF55781 65 250 7.19E-47 T 11-10-2018 Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 SUPERFAMILY SSF46785 8 80 1.91E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 Gene3D G3DSA:1.10.10.10 6 78 3.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 Gene3D G3DSA:3.30.450.40 79 255 9.9E-54 T 11-10-2018 IPR029016 GAF-like domain superfamily Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 Pfam PF01614 Bacterial transcriptional regulator 129 232 4.2E-29 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal Tbd_0050 6d07b29a4d027f07497568173d84eab1 257 Pfam PF09339 IclR helix-turn-helix domain 11 60 1.2E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 Gene3D G3DSA:1.20.1280.20 85 174 2.1E-20 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 SUPERFAMILY SSF47144 82 173 4.58E-22 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 SMART SM00271 5 70 6.3E-11 T 11-10-2018 IPR001623 DnaJ domain Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 Gene3D G3DSA:1.10.287.110 5 83 5.6E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 91 166 1.2E-18 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 SUPERFAMILY SSF46565 5 78 1.7E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 Pfam PF00226 DnaJ domain 6 74 7.4E-8 T 11-10-2018 IPR001623 DnaJ domain Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 5 174 23.131 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_1167 7afdab17abbeab2974b871f515fe9e6f 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 17 172 3.5E-32 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 366 3.4E-7 T 11-10-2018 Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.4E-7 T 11-10-2018 Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 Pfam PF12831 FAD dependent oxidoreductase 11 49 9.8E-11 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 SUPERFAMILY SSF51905 9 415 1.42E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 Gene3D G3DSA:3.50.50.60 7 113 6.7E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 329 6.2E-6 T 11-10-2018 Tbd_1648 7e5214e2d51f8a5c4f29c6a09aea79e5 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.2E-6 T 11-10-2018 Tbd_0648 9824cc406a14df3d7e033cbeacf86449 68 Pfam PF09851 Short C-terminal domain 40 66 2.8E-6 T 11-10-2018 IPR018649 SHOCT domain Tbd_0339 90a5b2601c923e9be171ff5336e021ac 248 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 234 2.3E-94 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Tbd_0339 90a5b2601c923e9be171ff5336e021ac 248 SUPERFAMILY SSF46626 17 228 6.92E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0339 90a5b2601c923e9be171ff5336e021ac 248 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 8 240 1.5E-96 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Tbd_0801 87a04a051aa9a7580f7ce6e59f1251eb 131 SUPERFAMILY SSF52833 22 127 1.73E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0801 87a04a051aa9a7580f7ce6e59f1251eb 131 Gene3D G3DSA:3.40.30.10 6 117 2.4E-11 T 11-10-2018 Tbd_0801 87a04a051aa9a7580f7ce6e59f1251eb 131 Pfam PF00085 Thioredoxin 23 114 2.1E-11 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tbd_0452 b230a6dd636826fd1f004db6ec074b58 251 Pfam PF02698 DUF218 domain 79 241 1.2E-24 T 11-10-2018 IPR003848 Domain of unknown function DUF218 Tbd_1475 7f0092d8e841cf6972c474968ee55973 478 SUPERFAMILY SSF51905 16 449 1.26E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1475 7f0092d8e841cf6972c474968ee55973 478 Pfam PF12831 FAD dependent oxidoreductase 27 465 4.3E-119 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Tbd_1475 7f0092d8e841cf6972c474968ee55973 478 Gene3D G3DSA:3.50.50.60 23 220 1.1E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1926 a59c0a0d45d2bd01c84b213703407a47 123 Gene3D G3DSA:1.10.10.370 44 115 2.4E-19 T 11-10-2018 Tbd_1926 a59c0a0d45d2bd01c84b213703407a47 123 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 26 111 9.0E-20 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1926 a59c0a0d45d2bd01c84b213703407a47 123 PIRSF PIRSF006223 2 115 1.5E-35 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1926 a59c0a0d45d2bd01c84b213703407a47 123 SUPERFAMILY SSF69721 20 112 4.45E-22 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_1926 a59c0a0d45d2bd01c84b213703407a47 123 Pfam PF04358 DsrC like protein 25 111 1.8E-22 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_1817 708c36566ab944ed83ad5c5b3cafbfa6 331 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 276 1.7E-13 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 Tbd_1384 794462d0dd94c749250656794918b0ed 365 Gene3D G3DSA:3.40.50.11740 51 290 4.0E-92 T 11-10-2018 Tbd_1384 794462d0dd94c749250656794918b0ed 365 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 11 355 1.6E-105 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tbd_1384 794462d0dd94c749250656794918b0ed 365 Gene3D G3DSA:1.10.10.2140 310 360 1.6E-21 T 11-10-2018 Tbd_1384 794462d0dd94c749250656794918b0ed 365 PIRSF PIRSF005622 1 361 6.4E-118 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tbd_1384 794462d0dd94c749250656794918b0ed 365 Pfam PF01924 Hydrogenase formation hypA family 6 356 1.2E-120 T 11-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tbd_1384 794462d0dd94c749250656794918b0ed 365 Gene3D G3DSA:3.40.50.11750 15 250 4.0E-92 T 11-10-2018 Tbd_0528 cdfecc2d60875f244f19d06cfea0d262 120 Gene3D G3DSA:2.60.320.10 26 118 3.8E-22 T 11-10-2018 IPR038690 NusG, domain 2 superfamily Tbd_0528 cdfecc2d60875f244f19d06cfea0d262 120 Pfam PF07009 NusG domain II 16 111 2.3E-22 T 11-10-2018 IPR024045 NusG, domain 2 Tbd_2491 bdba94dc6187669249635551d02fad09 301 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 75 284 7.1E-16 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Tbd_2491 bdba94dc6187669249635551d02fad09 301 SUPERFAMILY SSF51197 16 289 8.7E-49 T 11-10-2018 Tbd_2491 bdba94dc6187669249635551d02fad09 301 Gene3D G3DSA:3.60.130.10 44 299 1.5E-30 T 11-10-2018 Tbd_2481 e33ab168a48916fbe9966521a4f16e89 99 Gene3D G3DSA:3.40.1260.10 1 99 7.5E-35 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2481 e33ab168a48916fbe9966521a4f16e89 99 Pfam PF04077 DsrH like protein 7 94 1.2E-28 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Tbd_2481 e33ab168a48916fbe9966521a4f16e89 99 SUPERFAMILY SSF75169 1 98 3.79E-28 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2481 e33ab168a48916fbe9966521a4f16e89 99 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 98 8.5E-34 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 Gene3D G3DSA:3.90.79.10 1 158 1.4E-43 T 11-10-2018 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 SUPERFAMILY SSF55811 2 153 6.5E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 Pfam PF00293 NUDIX domain 7 144 4.1E-23 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_2110 1e47bdc731bbc7475e5e795aed85e013 183 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.497 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Tbd_0585 f537a0cb9660096d6a0651536c9d2526 377 SMART SM00558 87 223 0.004 T 11-10-2018 IPR003347 JmjC domain Tbd_0585 f537a0cb9660096d6a0651536c9d2526 377 Gene3D G3DSA:2.60.120.650 2 212 7.5E-81 T 11-10-2018 Tbd_0585 f537a0cb9660096d6a0651536c9d2526 377 SUPERFAMILY SSF51197 9 296 2.2E-75 T 11-10-2018 Tbd_0585 f537a0cb9660096d6a0651536c9d2526 377 Gene3D G3DSA:1.10.10.2510 213 375 2.3E-24 T 11-10-2018 Tbd_0585 f537a0cb9660096d6a0651536c9d2526 377 Pfam PF08007 Cupin superfamily protein 17 298 4.2E-89 T 11-10-2018 IPR003347 JmjC domain Tbd_2754 2c27e8cf52214ee67fd68d0c666f0c14 269 SUPERFAMILY SSF53901 7 168 1.27E-8 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Tbd_2754 2c27e8cf52214ee67fd68d0c666f0c14 269 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 38 205 2.3E-27 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Tbd_1640 6c3d465ed989b74081fc93abbf65b04b 158 Pfam PF05130 FlgN protein 6 145 1.2E-27 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Tbd_1640 6c3d465ed989b74081fc93abbf65b04b 158 SUPERFAMILY SSF140566 6 129 1.09E-23 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Tbd_1640 6c3d465ed989b74081fc93abbf65b04b 158 Gene3D G3DSA:1.20.58.300 6 129 3.9E-28 T 11-10-2018 Tbd_0794 b342c0e46fbaa82d750250f675204c1f 167 SMART SM00935 11 165 7.5E-54 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tbd_0794 b342c0e46fbaa82d750250f675204c1f 167 Pfam PF03938 Outer membrane protein (OmpH-like) 11 164 1.4E-33 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tbd_0794 b342c0e46fbaa82d750250f675204c1f 167 SUPERFAMILY SSF111384 24 164 1.7E-33 T 11-10-2018 Tbd_0794 b342c0e46fbaa82d750250f675204c1f 167 PIRSF PIRSF002094 1 167 3.2E-53 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Tbd_0794 b342c0e46fbaa82d750250f675204c1f 167 Gene3D G3DSA:3.30.910.20 23 164 3.5E-40 T 11-10-2018 IPR024930 Skp domain superfamily Tbd_1862 93c4e62556d8271489ffe9c75d056cb8 420 Pfam PF14341 PilX N-terminal 14 64 1.3E-10 T 11-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain Tbd_2537 9aa0cc410947abd731c71c6acc9adf06 444 SUPERFAMILY SSF56935 122 418 2.5E-16 T 11-10-2018 Tbd_1591 f2b6031b22a0b293dd5da7c264e77a72 131 SUPERFAMILY SSF160214 32 131 1.24E-23 T 11-10-2018 IPR035924 FlaG-like superfamily Tbd_1591 f2b6031b22a0b293dd5da7c264e77a72 131 Pfam PF03646 FlaG protein 44 128 2.2E-22 T 11-10-2018 IPR005186 FlaG protein Tbd_1591 f2b6031b22a0b293dd5da7c264e77a72 131 Gene3D G3DSA:3.30.160.170 33 127 2.6E-14 T 11-10-2018 IPR035924 FlaG-like superfamily Tbd_2653 7d9f78bfcb3a5c4ad274be4e9c49b300 1043 Hamap MF_01871 UPF0753 protein . 10 1019 24.573 T 11-10-2018 IPR018752 Uncharacterised protein family UPF0753 Tbd_2653 7d9f78bfcb3a5c4ad274be4e9c49b300 1043 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 15 1004 4.4E-274 T 11-10-2018 IPR018752 Uncharacterised protein family UPF0753 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 SUPERFAMILY SSF53850 86 299 1.38E-48 T 11-10-2018 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 SUPERFAMILY SSF46785 4 111 1.02E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 Gene3D G3DSA:3.40.190.290 91 301 3.9E-51 T 11-10-2018 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 Gene3D G3DSA:1.10.10.10 1 90 2.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 Pfam PF03466 LysR substrate binding domain 87 294 2.5E-52 T 11-10-2018 IPR005119 LysR, substrate-binding Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1717 caef4e75263e522cc954fe4b1717ee85 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tbd_1241 fa3c9d626537051787efe0dff3898a4b 184 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 2.3E-82 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Tbd_1241 fa3c9d626537051787efe0dff3898a4b 184 SUPERFAMILY SSF160930 6 160 2.48E-61 T 11-10-2018 Tbd_1241 fa3c9d626537051787efe0dff3898a4b 184 PIRSF PIRSF003159 1 181 2.6E-92 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Tbd_1241 fa3c9d626537051787efe0dff3898a4b 184 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 171 2.0E-99 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Tbd_1241 fa3c9d626537051787efe0dff3898a4b 184 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 183 43.843 T 11-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 Gene3D G3DSA:2.40.50.140 4 87 1.5E-32 T 11-10-2018 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 23.738 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 2.5E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 2.5E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 2.5E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 78 7.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 Pfam PF00366 Ribosomal protein S17 13 79 3.7E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 SUPERFAMILY SSF50249 9 85 1.54E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_0414 54aaca8ace2254cf0eaccd016b4803c5 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 78 2.2E-33 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 1.5E-9 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 1.5E-9 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 1.5E-9 T 11-10-2018 IPR003004 GspF/PilC family Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 Gene3D G3DSA:1.20.81.30 53 165 4.5E-23 T 11-10-2018 Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 Gene3D G3DSA:1.20.81.30 252 361 8.9E-26 T 11-10-2018 Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 Pfam PF00482 Type II secretion system (T2SS), protein F 65 188 1.1E-21 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_0546 911f03c7e73281126b8a8357c20550c8 401 Pfam PF00482 Type II secretion system (T2SS), protein F 269 391 2.2E-23 T 11-10-2018 IPR018076 Type II secretion system F domain Tbd_1757 61287431926a5ee1429880b40605da8a 346 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 11 315 4.2E-115 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 Tbd_1757 61287431926a5ee1429880b40605da8a 346 Pfam PF00581 Rhodanese-like domain 13 123 2.0E-9 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1757 61287431926a5ee1429880b40605da8a 346 Gene3D G3DSA:3.40.50.300 137 298 1.6E-5 T 11-10-2018 Tbd_1757 61287431926a5ee1429880b40605da8a 346 SMART SM00450 1 127 1.3E-12 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1757 61287431926a5ee1429880b40605da8a 346 SUPERFAMILY SSF52821 12 125 4.98E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1757 61287431926a5ee1429880b40605da8a 346 SUPERFAMILY SSF52540 140 273 7.25E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1757 61287431926a5ee1429880b40605da8a 346 ProSitePatterns PS00380 Rhodanese signature 1. 23 34 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Tbd_1757 61287431926a5ee1429880b40605da8a 346 Gene3D G3DSA:3.40.250.10 8 128 2.6E-40 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1401 9d264a042c80de8af8a48feee289b6aa 422 SUPERFAMILY SSF103473 6 400 4.05E-62 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1401 9d264a042c80de8af8a48feee289b6aa 422 Pfam PF07690 Major Facilitator Superfamily 17 366 2.1E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_1401 9d264a042c80de8af8a48feee289b6aa 422 Gene3D G3DSA:1.20.1250.20 1 185 9.3E-48 T 11-10-2018 Tbd_1401 9d264a042c80de8af8a48feee289b6aa 422 Gene3D G3DSA:1.20.1250.20 191 413 1.7E-49 T 11-10-2018 Tbd_2759 7fb2ed45f4c729fd4484ef15f106c24b 260 Gene3D G3DSA:3.90.550.10 9 209 1.4E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2759 7fb2ed45f4c729fd4484ef15f106c24b 260 SUPERFAMILY SSF53448 12 246 3.7E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_2759 7fb2ed45f4c729fd4484ef15f106c24b 260 Pfam PF00535 Glycosyl transferase family 2 12 136 1.0E-20 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_2742 f638dba587decd60620d2e1a49c14c71 108 Pfam PF03860 Domain of Unknown Function (DUF326) 86 105 8.0E-7 T 11-10-2018 IPR005560 Protein of unknown function DUF326 Tbd_2742 f638dba587decd60620d2e1a49c14c71 108 Gene3D G3DSA:1.20.1270.360 1 108 2.4E-34 T 11-10-2018 Tbd_1266 e3c7984b32224f528a7d0692422e37c9 673 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 184 7.9E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Tbd_1266 e3c7984b32224f528a7d0692422e37c9 673 Gene3D G3DSA:2.170.130.10 52 193 2.1E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Tbd_1266 e3c7984b32224f528a7d0692422e37c9 673 Pfam PF00593 TonB dependent receptor 258 672 5.4E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Tbd_1266 e3c7984b32224f528a7d0692422e37c9 673 SUPERFAMILY SSF56935 61 673 9.16E-90 T 11-10-2018 Tbd_1266 e3c7984b32224f528a7d0692422e37c9 673 Gene3D G3DSA:2.40.170.20 194 673 5.6E-62 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Tbd_2660 6f7f680f34984f093424f2eacb0b5faa 114 PIRSF PIRSF021239 1 114 2.5E-51 T 11-10-2018 IPR007437 Protein of unknown function DUF486 Tbd_2660 6f7f680f34984f093424f2eacb0b5faa 114 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 1.5E-43 T 11-10-2018 IPR007437 Protein of unknown function DUF486 Tbd_2293 249b694657b7fbde40c18542060f1d46 299 PIRSF PIRSF011468 2 298 4.6E-136 T 11-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_2293 249b694657b7fbde40c18542060f1d46 299 Pfam PF06007 Phosphonate metabolism protein PhnJ 12 287 1.7E-138 T 11-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_0755 89ed433b65e2fea02fde7a36912e23fb 155 SUPERFAMILY SSF54523 12 112 1.65E-11 T 11-10-2018 Tbd_0755 89ed433b65e2fea02fde7a36912e23fb 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 3.0E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0755 89ed433b65e2fea02fde7a36912e23fb 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 6.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0755 89ed433b65e2fea02fde7a36912e23fb 155 Gene3D G3DSA:3.30.700.10 12 141 1.6E-8 T 11-10-2018 Tbd_2164 72f87eb6ed95f14cb82797c6e617ff88 356 SUPERFAMILY SSF53850 137 274 2.95E-5 T 11-10-2018 Tbd_2164 72f87eb6ed95f14cb82797c6e617ff88 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 315 3.6E-61 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tbd_2164 72f87eb6ed95f14cb82797c6e617ff88 356 Gene3D G3DSA:3.40.190.10 149 320 1.2E-129 T 11-10-2018 Tbd_2164 72f87eb6ed95f14cb82797c6e617ff88 356 Gene3D G3DSA:3.40.190.170 29 333 1.2E-129 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tbd_2164 72f87eb6ed95f14cb82797c6e617ff88 356 PIRSF PIRSF039026 1 354 1.5E-124 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 5.7E-103 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 Pfam PF01883 Iron-sulfur cluster assembly protein 7 78 1.2E-20 T 11-10-2018 IPR002744 MIP18 family-like Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 SUPERFAMILY SSF52540 91 324 8.38E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 Gene3D G3DSA:3.30.300.130 1 88 4.5E-8 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.578 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 SUPERFAMILY SSF117916 1 84 2.55E-15 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Tbd_2108 0bfada729055493e2ffeff9650e14b33 362 Gene3D G3DSA:3.40.50.300 89 338 1.2E-88 T 11-10-2018 Tbd_1542 3f3202437f82a23b9bcc1d6efa8a8978 327 SMART SM00382 22 177 3.5E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1542 3f3202437f82a23b9bcc1d6efa8a8978 327 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 207 7.0E-59 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tbd_1542 3f3202437f82a23b9bcc1d6efa8a8978 327 Pfam PF13177 DNA polymerase III, delta subunit 19 172 1.5E-38 T 11-10-2018 Tbd_1542 3f3202437f82a23b9bcc1d6efa8a8978 327 SUPERFAMILY SSF52540 5 212 3.47E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1542 3f3202437f82a23b9bcc1d6efa8a8978 327 Gene3D G3DSA:3.40.50.300 3 174 9.1E-51 T 11-10-2018 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 Pfam PF00849 RNA pseudouridylate synthase 67 157 2.2E-8 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 Gene3D G3DSA:3.10.290.10 2 57 2.8E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 111 240 2.5E-36 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 Gene3D G3DSA:3.30.2350.10 61 244 2.3E-44 T 11-10-2018 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 SUPERFAMILY SSF55174 5 98 2.49E-15 T 11-10-2018 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 Pfam PF01479 S4 domain 5 47 1.4E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 SUPERFAMILY SSF55120 66 243 5.28E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tbd_0435 555585c2a1b978eb04e7acd7fb6d4177 245 SMART SM00363 5 62 9.8E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1443 6dee7eae95efbf6d2f99f8d6a63db79b 126 Gene3D G3DSA:1.20.120.520 3 126 4.3E-14 T 11-10-2018 Tbd_1443 6dee7eae95efbf6d2f99f8d6a63db79b 126 Pfam PF01814 Hemerythrin HHE cation binding domain 12 122 2.8E-15 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Tbd_2269 dcf01a48e64e57cbfe833779d17b3fcb 266 Gene3D G3DSA:3.40.50.1820 27 256 7.1E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2269 dcf01a48e64e57cbfe833779d17b3fcb 266 SUPERFAMILY SSF53474 30 255 1.64E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2269 dcf01a48e64e57cbfe833779d17b3fcb 266 Pfam PF01738 Dienelactone hydrolase family 43 253 9.3E-19 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Tbd_2440 ede70a8fedca97cdcc5230a803b630ad 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 7.8E-36 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tbd_2440 ede70a8fedca97cdcc5230a803b630ad 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.061 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tbd_2440 ede70a8fedca97cdcc5230a803b630ad 117 SUPERFAMILY SSF81301 1 110 1.13E-37 T 11-10-2018 Tbd_2440 ede70a8fedca97cdcc5230a803b630ad 117 Gene3D G3DSA:3.30.460.10 1 116 3.7E-37 T 11-10-2018 Tbd_2440 ede70a8fedca97cdcc5230a803b630ad 117 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.4E-25 T 11-10-2018 Tbd_1459 a12cbdba0a90e97c88dca1188fa96429 118 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 4 106 1.2E-31 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_2171 f00ce1899edae66f24ffc313836ee301 676 Pfam PF03477 ATP cone domain 17 105 5.5E-22 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tbd_2171 f00ce1899edae66f24ffc313836ee301 676 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 133 670 1.3E-135 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tbd_2171 f00ce1899edae66f24ffc313836ee301 676 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 134 670 8.0E-171 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tbd_2171 f00ce1899edae66f24ffc313836ee301 676 Gene3D G3DSA:3.20.70.20 147 675 3.5E-105 T 11-10-2018 Tbd_2171 f00ce1899edae66f24ffc313836ee301 676 SUPERFAMILY SSF51998 134 668 8.24E-156 T 11-10-2018 Tbd_1379 70254c8f23336ecaa91c3d225c86ede6 136 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 21 129 7.5E-31 T 11-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Tbd_1379 70254c8f23336ecaa91c3d225c86ede6 136 Gene3D G3DSA:3.30.1370.140 17 116 9.5E-35 T 11-10-2018 IPR038527 HupH, C-terminal domain superfamily Tbd_1379 70254c8f23336ecaa91c3d225c86ede6 136 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 21 118 3.0E-50 T 11-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Tbd_1541 2b04e2238d0d47a1bb10d363352f1662 123 Gene3D G3DSA:2.40.10.220 8 123 6.5E-45 T 11-10-2018 Tbd_1541 2b04e2238d0d47a1bb10d363352f1662 123 Pfam PF07238 PilZ domain 21 106 1.7E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 Pfam PF10150 Ribonuclease E/G family 115 384 6.1E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 Gene3D G3DSA:3.40.1260.20 394 504 6.2E-37 T 11-10-2018 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 418 3.6E-158 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 SUPERFAMILY SSF50249 39 119 6.76E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tbd_1564 be41a4cb32408d594539de0297a4d557 873 SMART SM00316 37 113 1.8E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 Hamap MF_00970 Ribonuclease E [rne]. 1 864 32.086 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 Gene3D G3DSA:2.40.50.140 31 119 5.1E-29 T 11-10-2018 Tbd_1564 be41a4cb32408d594539de0297a4d557 873 Pfam PF00575 S1 RNA binding domain 36 112 3.8E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 Tbd_1176 947ed0638f507934a9687c61ed13ade2 261 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 243 2.9E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1176 947ed0638f507934a9687c61ed13ade2 261 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.0E-8 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1176 947ed0638f507934a9687c61ed13ade2 261 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 219 236 1.0E-8 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1176 947ed0638f507934a9687c61ed13ade2 261 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 199 217 1.0E-8 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tbd_1887 75a110d4a654a29334eea1aac4f1082d 280 Gene3D G3DSA:3.20.20.60 79 201 2.2E-13 T 11-10-2018 Tbd_1887 75a110d4a654a29334eea1aac4f1082d 280 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 64 178 1.1E-8 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Tbd_1887 75a110d4a654a29334eea1aac4f1082d 280 SUPERFAMILY SSF51621 62 184 1.57E-14 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_2167 6c5943ac88700b41079833882325f9c9 258 SMART SM01057 36 255 8.3E-97 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain Tbd_2167 6c5943ac88700b41079833882325f9c9 258 SUPERFAMILY SSF51069 35 255 5.63E-71 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Tbd_2167 6c5943ac88700b41079833882325f9c9 258 Pfam PF00194 Eukaryotic-type carbonic anhydrase 35 255 1.0E-47 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain Tbd_2167 6c5943ac88700b41079833882325f9c9 258 Gene3D G3DSA:3.10.200.10 33 257 8.2E-77 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 Pfam PF04055 Radical SAM superfamily 85 234 1.7E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 SUPERFAMILY SSF102114 51 320 3.01E-44 T 11-10-2018 Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 10 357 4.7E-195 T 11-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 PIRSF PIRSF004869 5 318 1.2E-94 T 11-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 Gene3D G3DSA:3.20.20.70 69 291 2.5E-36 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1585 6ce67f9d33110d1a7e78946c8fa46e0e 364 Pfam PF13353 4Fe-4S single cluster domain 79 175 1.9E-6 T 11-10-2018 Tbd_2723 490ed08b457830dc6cebeaf0c6cf32db 100 Gene3D G3DSA:1.20.5.50 49 73 1.4E-6 T 11-10-2018 Tbd_2723 490ed08b457830dc6cebeaf0c6cf32db 100 Pfam PF05164 Cell division protein ZapA 7 69 5.8E-22 T 11-10-2018 IPR007838 Cell division protein ZapA-like Tbd_2723 490ed08b457830dc6cebeaf0c6cf32db 100 SUPERFAMILY SSF102829 7 94 4.18E-22 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily Tbd_2723 490ed08b457830dc6cebeaf0c6cf32db 100 Gene3D G3DSA:1.10.20.30 1 48 5.6E-17 T 11-10-2018 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 83 2.0E-21 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.532 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.7E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-25 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 Gene3D G3DSA:1.20.58.110 1 87 3.3E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1854 bba6166196e4e2ba27bfa55f682eb982 87 SUPERFAMILY SSF46992 3 86 1.31E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 Gene3D G3DSA:2.30.30.280 210 277 2.1E-28 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 358 38.435 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 Gene3D G3DSA:2.40.30.10 281 358 1.1E-24 T 11-10-2018 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 Gene3D G3DSA:3.40.50.620 1 209 1.6E-89 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 Pfam PF03054 tRNA methyl transferase 4 357 1.8E-131 T 11-10-2018 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 3.5E-129 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tbd_0851 625441bf3b0244ea4e8f582d225d0111 358 SUPERFAMILY SSF52402 2 241 1.68E-57 T 11-10-2018 Tbd_1658 42b3a7a57b893da07d1e92072cbddf16 102 Pfam PF04316 Anti-sigma-28 factor, FlgM 35 89 3.1E-11 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Tbd_1658 42b3a7a57b893da07d1e92072cbddf16 102 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 2 91 1.2E-19 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Tbd_1658 42b3a7a57b893da07d1e92072cbddf16 102 SUPERFAMILY SSF101498 20 90 1.96E-11 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Tbd_0357 50593cdad32b7479da3bb3cd3fe009ab 555 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 176 299 3.1E-14 T 11-10-2018 Tbd_0357 50593cdad32b7479da3bb3cd3fe009ab 555 SUPERFAMILY SSF49899 132 303 4.66E-19 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Tbd_0357 50593cdad32b7479da3bb3cd3fe009ab 555 Pfam PF10102 Domain of unknown function (DUF2341) 64 145 1.6E-14 T 11-10-2018 IPR018765 Domain of unknown function DUF2341 Tbd_0357 50593cdad32b7479da3bb3cd3fe009ab 555 Gene3D G3DSA:2.60.120.200 96 300 1.5E-15 T 11-10-2018 Tbd_0357 50593cdad32b7479da3bb3cd3fe009ab 555 Pfam PF01618 MotA/TolQ/ExbB proton channel family 429 538 3.6E-27 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 Gene3D G3DSA:3.40.50.1000 1 180 7.4E-53 T 11-10-2018 IPR023214 HAD superfamily Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 Pfam PF13242 HAD-hyrolase-like 99 170 2.2E-11 T 11-10-2018 Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 SUPERFAMILY SSF56784 1 176 8.54E-44 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 6.0E-41 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 PIRSF PIRSF004682 1 180 2.7E-51 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Tbd_2346 2d5018c60f2af65eb295eeeca2343605 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 1.1E-30 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Tbd_0076 f2c002b08e30c3fc0e88ba93cb7eb760 98 SUPERFAMILY SSF46626 19 88 1.39E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0076 f2c002b08e30c3fc0e88ba93cb7eb760 98 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 23 87 1.1E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0076 f2c002b08e30c3fc0e88ba93cb7eb760 98 Gene3D G3DSA:1.10.760.10 2 92 6.1E-15 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 SUPERFAMILY SSF54919 1 138 7.2E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 Gene3D G3DSA:3.30.70.141 1 141 9.1E-60 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.321 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 SMART SM00562 3 140 5.5E-86 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 3.7E-56 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.0E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.0E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.0E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.0E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_0590 60299a7d55d10d73bcdeb723ea9fe297 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.0E-41 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tbd_1291 9a19b47fbf9cbc7fd317d42a23d7148b 510 Pfam PF01436 NHL repeat 411 438 1.8E-5 T 11-10-2018 IPR001258 NHL repeat GO:0005515 Tbd_1291 9a19b47fbf9cbc7fd317d42a23d7148b 510 SUPERFAMILY SSF101898 98 440 5.75E-22 T 11-10-2018 Tbd_1291 9a19b47fbf9cbc7fd317d42a23d7148b 510 Gene3D G3DSA:2.120.10.30 226 320 6.6E-15 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_1291 9a19b47fbf9cbc7fd317d42a23d7148b 510 Gene3D G3DSA:2.120.10.30 321 439 3.2E-30 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_1291 9a19b47fbf9cbc7fd317d42a23d7148b 510 Gene3D G3DSA:2.120.10.30 100 225 1.1E-21 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 365 6.0E-73 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Pfam PF13437 HlyD family secretion protein 176 282 2.8E-13 T 11-10-2018 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Gene3D G3DSA:2.40.30.170 54 295 2.4E-70 T 11-10-2018 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Gene3D G3DSA:2.40.420.20 296 363 2.4E-70 T 11-10-2018 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Pfam PF13533 Biotin-lipoyl like 65 113 1.1E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 SUPERFAMILY SSF111369 54 291 6.54E-44 T 11-10-2018 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Gene3D G3DSA:2.40.50.100 64 207 2.4E-70 T 11-10-2018 Tbd_2320 7f8c23e058b84206f09a9749abe93457 381 Gene3D G3DSA:1.10.287.470 99 172 2.4E-70 T 11-10-2018 Tbd_2538 f66d9e58d44da2ff48d85aed9ddaf9db 297 Gene3D G3DSA:3.40.50.1980 187 296 1.5E-8 T 11-10-2018 Tbd_2538 f66d9e58d44da2ff48d85aed9ddaf9db 297 Gene3D G3DSA:3.40.50.1980 19 183 9.8E-29 T 11-10-2018 Tbd_2538 f66d9e58d44da2ff48d85aed9ddaf9db 297 Pfam PF01297 Zinc-uptake complex component A periplasmic 25 294 3.0E-32 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Tbd_2538 f66d9e58d44da2ff48d85aed9ddaf9db 297 SUPERFAMILY SSF53807 13 295 6.38E-61 T 11-10-2018 Tbd_1767 465b5fdb999a392c8dc557a7b4fa60f8 395 SUPERFAMILY SSF56796 6 393 4.06E-90 T 11-10-2018 Tbd_1767 465b5fdb999a392c8dc557a7b4fa60f8 395 Gene3D G3DSA:1.20.1090.10 191 394 5.1E-46 T 11-10-2018 Tbd_1767 465b5fdb999a392c8dc557a7b4fa60f8 395 Gene3D G3DSA:3.40.50.1970 1 190 9.3E-47 T 11-10-2018 Tbd_1767 465b5fdb999a392c8dc557a7b4fa60f8 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 386 1.9E-99 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tbd_1874 579dbf6aec11382cf103b22354a7a54c 249 SUPERFAMILY SSF53448 2 214 7.67E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1874 579dbf6aec11382cf103b22354a7a54c 249 Gene3D G3DSA:3.90.550.10 1 230 2.1E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1874 579dbf6aec11382cf103b22354a7a54c 249 Pfam PF00535 Glycosyl transferase family 2 4 156 4.7E-21 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 Pfam PF06508 Queuosine biosynthesis protein QueC 5 213 5.3E-76 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 Gene3D G3DSA:3.40.50.620 3 221 3.2E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 220 55.572 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 9.3E-59 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 SUPERFAMILY SSF52402 5 223 1.81E-65 T 11-10-2018 Tbd_2202 1d36b90b1e2dcfff0503541689f44663 224 PIRSF PIRSF006293 1 224 2.1E-75 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Tbd_1872 3fd06827c24d680bfdba82d40f2246a3 320 Pfam PF00953 Glycosyl transferase family 4 69 208 3.0E-25 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tbd_1425 8bd6ad7a0f19834c1a64db0dbb48573e 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 128 1.2E-20 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tbd_1425 8bd6ad7a0f19834c1a64db0dbb48573e 141 SUPERFAMILY SSF52788 4 129 9.94E-37 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tbd_1425 8bd6ad7a0f19834c1a64db0dbb48573e 141 SMART SM00226 5 133 2.7E-26 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tbd_1425 8bd6ad7a0f19834c1a64db0dbb48573e 141 Gene3D G3DSA:3.40.50.2300 3 131 5.3E-36 T 11-10-2018 Tbd_0337 44e41fb1d0dd3497ee6cc1fd3dd8d91c 197 Gene3D G3DSA:3.40.30.10 32 193 5.0E-51 T 11-10-2018 Tbd_0337 44e41fb1d0dd3497ee6cc1fd3dd8d91c 197 Pfam PF02630 SCO1/SenC 36 173 2.0E-36 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0337 44e41fb1d0dd3497ee6cc1fd3dd8d91c 197 SUPERFAMILY SSF52833 38 194 2.77E-50 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1958 9238e9d5aab85b9f3db0b47a4bba4a60 304 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 222 243 6.9E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1099 d3a858133fba80613ca513ab658307b9 367 Pfam PF06804 NlpB/DapX lipoprotein 26 363 2.0E-46 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein Tbd_1099 d3a858133fba80613ca513ab658307b9 367 Gene3D G3DSA:3.30.310.170 246 365 2.6E-9 T 11-10-2018 Tbd_1099 d3a858133fba80613ca513ab658307b9 367 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 1 367 30.786 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC Tbd_2656 bedbbd4585d450db52fcbbf48187d18d 507 Pfam PF02417 Chromate transporter 82 241 8.4E-35 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Tbd_2656 bedbbd4585d450db52fcbbf48187d18d 507 Pfam PF02417 Chromate transporter 314 500 2.0E-32 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Tbd_2656 bedbbd4585d450db52fcbbf48187d18d 507 TIGRFAM TIGR00937 2A51: chromate efflux transporter 84 497 4.4E-69 T 11-10-2018 IPR014047 Chromate transporter, long chain Tbd_2656 bedbbd4585d450db52fcbbf48187d18d 507 PIRSF PIRSF004810 63 507 1.0E-120 T 11-10-2018 IPR014047 Chromate transporter, long chain Tbd_2616 d374e77e8deb55ea05e33a645c47c73f 551 SUPERFAMILY SSF52091 431 523 3.14E-17 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2616 d374e77e8deb55ea05e33a645c47c73f 551 Pfam PF00916 Sulfate permease family 18 374 3.3E-81 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Tbd_2616 d374e77e8deb55ea05e33a645c47c73f 551 Gene3D G3DSA:3.30.750.24 429 540 4.6E-25 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2616 d374e77e8deb55ea05e33a645c47c73f 551 Pfam PF01740 STAS domain 433 525 2.0E-15 T 11-10-2018 IPR002645 STAS domain Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 318 340 3.0E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 102 121 3.0E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 68 80 3.0E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 341 355 3.0E-23 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 PIRSF PIRSF015855 2 558 4.2E-113 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 SUPERFAMILY SSF53335 43 387 7.36E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 71 77 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tbd_0936 056aaff6056cb850f153da31d1b3e092 577 Pfam PF01555 DNA methylase 68 373 1.2E-52 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tbd_1151 f762ebc86d13e32d02137639c004761b 211 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 164 3.4E-39 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1151 f762ebc86d13e32d02137639c004761b 211 Gene3D G3DSA:1.20.120.1200 4 167 2.8E-45 T 11-10-2018 Tbd_1260 5180f419e486bdde58a4508adfb0667d 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 264 275 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1260 5180f419e486bdde58a4508adfb0667d 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1260 5180f419e486bdde58a4508adfb0667d 373 SUPERFAMILY SSF46548 240 364 9.24E-15 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1260 5180f419e486bdde58a4508adfb0667d 373 Pfam PF17179 4Fe-4S dicluster domain 263 357 7.2E-32 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Gene3D G3DSA:3.90.400.10 106 176 6.5E-216 T 11-10-2018 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 8 543 5.4E-276 T 11-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Gene3D G3DSA:3.20.20.80 8 457 6.5E-216 T 11-10-2018 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 SUPERFAMILY SSF56112 753 1046 1.56E-6 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 SUPERFAMILY SSF51011 468 543 2.88E-17 T 11-10-2018 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 SMART SM00642 16 415 1.8E-94 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Pfam PF00128 Alpha amylase, catalytic domain 31 384 2.0E-72 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 SUPERFAMILY SSF51445 5 460 2.6E-130 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Pfam PF16657 Maltogenic Amylase, C-terminal domain 463 540 2.2E-29 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Gene3D G3DSA:2.60.40.1180 463 556 7.1E-32 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Tbd_1172 09c9669d8cbaaf1f0b0945a12ffb7c15 1095 Gene3D G3DSA:3.90.1200.10 815 1093 6.1E-33 T 11-10-2018 Tbd_2535 fa9be0789bf817f0bc32244f68089b0f 78 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 9 77 4.7E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tbd_2535 fa9be0789bf817f0bc32244f68089b0f 78 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 71 3.0E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tbd_2535 fa9be0789bf817f0bc32244f68089b0f 78 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 4 72 21.881 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tbd_2535 fa9be0789bf817f0bc32244f68089b0f 78 Pfam PF01809 Haemolytic domain 6 71 1.4E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tbd_2535 fa9be0789bf817f0bc32244f68089b0f 78 SMART SM01234 4 71 7.7E-41 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Tbd_1530 208b5259996bec91430d17850b7646fa 100 Pfam PF03795 YCII-related domain 1 95 4.1E-26 T 11-10-2018 IPR005545 YCII-related Tbd_1530 208b5259996bec91430d17850b7646fa 100 SUPERFAMILY SSF54909 1 97 1.82E-29 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Tbd_1530 208b5259996bec91430d17850b7646fa 100 Gene3D G3DSA:3.30.70.1060 1 98 1.6E-33 T 11-10-2018 Tbd_0561 d497e766da1b39775911ab2e44a8d905 467 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 196 252 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0561 d497e766da1b39775911ab2e44a8d905 467 SUPERFAMILY SSF81442 3 450 8.5E-91 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0561 d497e766da1b39775911ab2e44a8d905 467 Gene3D G3DSA:1.20.210.10 1 466 1.5E-126 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0561 d497e766da1b39775911ab2e44a8d905 467 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 436 4.4E-82 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0302 5e13b5d99fa69169bf4d92e6ae1f27ea 383 Pfam PF00534 Glycosyl transferases group 1 190 359 2.1E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_0302 5e13b5d99fa69169bf4d92e6ae1f27ea 383 Pfam PF13439 Glycosyltransferase Family 4 16 178 3.4E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_0302 5e13b5d99fa69169bf4d92e6ae1f27ea 383 Gene3D G3DSA:3.40.50.2000 5 368 1.1E-91 T 11-10-2018 Tbd_0302 5e13b5d99fa69169bf4d92e6ae1f27ea 383 SUPERFAMILY SSF53756 3 377 4.54E-80 T 11-10-2018 Tbd_0302 5e13b5d99fa69169bf4d92e6ae1f27ea 383 Gene3D G3DSA:3.40.50.2000 176 367 1.1E-91 T 11-10-2018 Tbd_2241 80865132afe515a454122c2dcf59ac85 137 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 37 117 3.1E-6 T 11-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Tbd_1406 d465435261b7d4c83391edf95e3b5c5e 232 SUPERFAMILY SSF103501 3 226 4.58E-64 T 11-10-2018 IPR036197 NarG-like superfamily Tbd_1406 d465435261b7d4c83391edf95e3b5c5e 232 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 226 2.3E-73 T 11-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 Tbd_1406 d465435261b7d4c83391edf95e3b5c5e 232 Pfam PF02665 Nitrate reductase gamma subunit 4 226 4.6E-81 T 11-10-2018 IPR023234 NarG-like domain Tbd_1406 d465435261b7d4c83391edf95e3b5c5e 232 Gene3D G3DSA:1.20.950.20 2 218 9.1E-74 T 11-10-2018 Tbd_2555 603daaa3da66effc3e60341bee20c91d 280 Gene3D G3DSA:3.40.1190.20 5 274 1.9E-80 T 11-10-2018 IPR029056 Ribokinase-like Tbd_2555 603daaa3da66effc3e60341bee20c91d 280 SUPERFAMILY SSF53613 10 271 2.18E-70 T 11-10-2018 IPR029056 Ribokinase-like Tbd_2555 603daaa3da66effc3e60341bee20c91d 280 Pfam PF08543 Phosphomethylpyrimidine kinase 21 262 7.6E-77 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Tbd_2318 b036a3c5096d67d59dab83598f5f8fc0 136 Pfam PF09335 SNARE associated Golgi protein 34 129 2.5E-11 T 11-10-2018 IPR032816 SNARE associated Golgi protein Tbd_0628 4cc95174be1f2206722de9bfecf8180d 68 Pfam PF11809 Domain of unknown function (DUF3330) 25 68 1.7E-11 T 11-10-2018 IPR021767 Transposon Tn21 modulator protein Tbd_0617 dbf94ecfd6bb048ad9cc027f92df2fdd 258 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 3 258 64.781 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Tbd_0617 dbf94ecfd6bb048ad9cc027f92df2fdd 258 Pfam PF03618 Kinase/pyrophosphorylase 6 254 4.4E-69 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Tbd_2705 047ffef510d4ba47873c1af5efa1c15f 319 SUPERFAMILY SSF52540 91 280 1.08E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2705 047ffef510d4ba47873c1af5efa1c15f 319 Pfam PF02562 PhoH-like protein 105 307 2.1E-93 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Tbd_2705 047ffef510d4ba47873c1af5efa1c15f 319 Gene3D G3DSA:3.40.50.300 102 308 3.4E-72 T 11-10-2018 Tbd_1511 4a463b808b831f50253e47761bef6d08 451 Pfam PF02601 Exonuclease VII, large subunit 133 443 7.9E-95 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Tbd_1511 4a463b808b831f50253e47761bef6d08 451 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 18 352 6.5E-126 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tbd_1511 4a463b808b831f50253e47761bef6d08 451 Pfam PF13742 OB-fold nucleic acid binding domain 17 109 5.1E-28 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Tbd_1511 4a463b808b831f50253e47761bef6d08 451 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 14 446 28.546 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tbd_2253 a2213ba64d1c1a94b32bd8a28ddf49ed 389 Pfam PF01594 AI-2E family transporter 39 377 2.2E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 Gene3D G3DSA:3.40.718.10 1 353 6.9E-147 T 11-10-2018 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 SMART SM01329 2 349 5.9E-202 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 348 1.5E-149 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 SUPERFAMILY SSF53659 1 350 5.38E-120 T 11-10-2018 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 349 2.8E-134 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tbd_1920 76bc52056f3976e53dd1a70f45cb7001 353 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 353 50.812 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 Gene3D G3DSA:1.10.150.280 17 86 7.8E-22 T 11-10-2018 Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 SMART SM00278 30 49 0.12 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 SMART SM00278 60 79 140.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 20 82 7.3E-23 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 SUPERFAMILY SSF47781 21 86 1.56E-26 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_1766 b8e70ced8e02eaaca30362cc26e7b9f3 89 Pfam PF12836 Helix-hairpin-helix motif 21 81 1.4E-23 T 11-10-2018 Tbd_0581 a549f585bbf2b8df4e2247fdaff00592 359 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 346 1.8E-113 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Tbd_0581 a549f585bbf2b8df4e2247fdaff00592 359 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 346 1.7E-57 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Tbd_1930 5439ca1513787531542ebef669917535 232 Gene3D G3DSA:1.20.1260.140 26 231 1.9E-85 T 11-10-2018 IPR038659 Alternative oxidase superfamily Tbd_1930 5439ca1513787531542ebef669917535 232 Pfam PF01786 Alternative oxidase 29 221 1.1E-77 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 Tbd_1930 5439ca1513787531542ebef669917535 232 PIRSF PIRSF005229 11 230 1.0E-98 T 11-10-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 Tbd_0247 53d344ceb2ab95af2abe116c23868cbf 364 Pfam PF02405 Permease MlaE 148 357 2.5E-62 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Tbd_1185 8778512d599881b9fd3f99197f523537 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 142 153 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1185 8778512d599881b9fd3f99197f523537 231 SUPERFAMILY SSF46548 101 229 5.41E-38 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1185 8778512d599881b9fd3f99197f523537 231 SUPERFAMILY SSF54292 2 100 4.85E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tbd_1185 8778512d599881b9fd3f99197f523537 231 Pfam PF13534 4Fe-4S dicluster domain 141 214 2.0E-9 T 11-10-2018 Tbd_1185 8778512d599881b9fd3f99197f523537 231 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 223 4.1E-78 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1185 8778512d599881b9fd3f99197f523537 231 Gene3D G3DSA:1.10.1060.10 101 231 4.3E-54 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tbd_1185 8778512d599881b9fd3f99197f523537 231 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 2 105 5.9E-30 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tbd_1185 8778512d599881b9fd3f99197f523537 231 Gene3D G3DSA:3.10.20.30 1 100 2.9E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Tbd_2652 1acf35a7d2129ff38db98fb9be7c7ce3 108 Pfam PF00543 Nitrogen regulatory protein P-II 12 99 1.2E-5 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_2652 1acf35a7d2129ff38db98fb9be7c7ce3 108 SMART SM00938 12 107 5.0E-4 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tbd_2652 1acf35a7d2129ff38db98fb9be7c7ce3 108 SUPERFAMILY SSF54913 5 106 3.06E-19 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_2652 1acf35a7d2129ff38db98fb9be7c7ce3 108 Gene3D G3DSA:3.30.70.120 1 108 5.1E-30 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tbd_1004 fd771fb0d551edda82219a338333977c 160 Gene3D G3DSA:3.30.1330.50 2 160 1.6E-69 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1004 fd771fb0d551edda82219a338333977c 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5 158 1.3E-68 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1004 fd771fb0d551edda82219a338333977c 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 4 159 36.623 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1004 fd771fb0d551edda82219a338333977c 160 Pfam PF02542 YgbB family 4 158 8.7E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1004 fd771fb0d551edda82219a338333977c 160 SUPERFAMILY SSF69765 4 159 2.75E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1004 fd771fb0d551edda82219a338333977c 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 38 53 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tbd_1595 69985ea0a06358a5c1a16429781577bb 355 Pfam PF02120 Flagellar hook-length control protein FliK 274 354 6.5E-17 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Tbd_2820 539aa5ad31345c5ffc45b6e4c8946e6a 275 Pfam PF13662 Toprim domain 189 261 1.1E-9 T 11-10-2018 IPR006171 TOPRIM domain Tbd_2820 539aa5ad31345c5ffc45b6e4c8946e6a 275 SMART SM00493 188 266 0.0058 T 11-10-2018 IPR006171 TOPRIM domain Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 Gene3D G3DSA:3.90.780.10 422 529 1.5E-18 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 SUPERFAMILY SSF56300 52 377 1.81E-56 T 11-10-2018 Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 Gene3D G3DSA:3.60.21.10 50 382 9.5E-57 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 ProSitePatterns PS00785 5'-nucleotidase signature 1. 55 67 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 Pfam PF02872 5'-nucleotidase, C-terminal domain 405 525 4.4E-6 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_2012 b0d6456d42be9ca40458033d1a1eec94 713 SUPERFAMILY SSF55816 405 571 3.92E-9 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_2588 8fedc92935bd4f253fb9b88ccdb365b4 224 SUPERFAMILY SSF47781 18 89 4.22E-6 T 11-10-2018 IPR010994 RuvA domain 2-like Tbd_2588 8fedc92935bd4f253fb9b88ccdb365b4 224 Gene3D G3DSA:3.40.140.10 101 224 5.9E-44 T 11-10-2018 Tbd_2588 8fedc92935bd4f253fb9b88ccdb365b4 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.7E-69 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 Tbd_2588 8fedc92935bd4f253fb9b88ccdb365b4 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Tbd_2588 8fedc92935bd4f253fb9b88ccdb365b4 224 Pfam PF04002 RadC-like JAB domain 104 222 9.2E-45 T 11-10-2018 IPR025657 RadC-like JAB domain Tbd_1211 810a81da7cb90725f2ea3995fd803804 168 SMART SM00507 5 57 0.0032 T 11-10-2018 IPR003615 HNH nuclease Tbd_1211 810a81da7cb90725f2ea3995fd803804 168 Gene3D G3DSA:3.30.40.60 4 83 2.6E-10 T 11-10-2018 Tbd_1211 810a81da7cb90725f2ea3995fd803804 168 Pfam PF14279 HNH endonuclease 17 61 2.2E-7 T 11-10-2018 IPR029471 HNH endonuclease 5 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 Pfam PF00293 NUDIX domain 173 300 3.4E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 SUPERFAMILY SSF55811 163 305 6.63E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 Gene3D G3DSA:3.90.79.10 174 305 1.9E-26 T 11-10-2018 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 PRINTS PR00502 NUDIX hydrolase family signature 200 214 3.0E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 PRINTS PR00502 NUDIX hydrolase family signature 214 229 3.0E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_2635 51c66425045b324bda1098c1e8e8979f 313 ProSitePatterns PS00893 Nudix box signature. 205 226 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_1867 d45c18feb6c17f448148271896388a3d 327 Pfam PF06258 Mitochondrial fission ELM1 31 322 1.5E-70 T 11-10-2018 IPR009367 Mitochondrial fission protein ELM1-like Tbd_1307 2b482c944c8c7778ce7a1f1b73d99634 124 Pfam PF08895 Domain of unknown function (DUF1840) 23 123 6.2E-32 T 11-10-2018 IPR014991 Protein of unknown function DUF1840 Tbd_0849 61bfd4e7682a84462ff41c7ae130bb3d 213 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 189 211 3.9E-7 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0849 61bfd4e7682a84462ff41c7ae130bb3d 213 Pfam PF07589 PEP-CTERM motif 188 211 3.7E-9 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0849 61bfd4e7682a84462ff41c7ae130bb3d 213 SMART SM00754 44 188 1.8E-8 T 11-10-2018 IPR010895 CHRD Tbd_0849 61bfd4e7682a84462ff41c7ae130bb3d 213 Pfam PF07452 CHRD domain 47 186 2.6E-18 T 11-10-2018 IPR010895 CHRD Tbd_2567 d2151d6a951a01f1035c8f0ece4c6861 252 Gene3D G3DSA:3.40.50.10090 39 166 9.4E-67 T 11-10-2018 Tbd_2567 d2151d6a951a01f1035c8f0ece4c6861 252 SUPERFAMILY SSF69618 7 247 5.49E-53 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2567 d2151d6a951a01f1035c8f0ece4c6861 252 Gene3D G3DSA:3.40.50.10090 10 235 9.4E-67 T 11-10-2018 Tbd_2567 d2151d6a951a01f1035c8f0ece4c6861 252 Pfam PF02602 Uroporphyrinogen-III synthase HemD 21 230 2.5E-36 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tbd_2470 973dcc53f84be5efcd106b215d5a58d1 271 SUPERFAMILY SSF56112 73 191 1.39E-7 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_2681 fee66d12eda665b06f1f3b34e8d93d55 634 Gene3D G3DSA:3.30.950.30 2 150 3.5E-36 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily Tbd_2681 fee66d12eda665b06f1f3b34e8d93d55 634 Gene3D G3DSA:3.30.565.60 263 407 4.4E-30 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily Tbd_2681 fee66d12eda665b06f1f3b34e8d93d55 634 Pfam PF04326 Putative DNA-binding domain 15 142 1.2E-11 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Tbd_2681 fee66d12eda665b06f1f3b34e8d93d55 634 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 324 400 4.8E-17 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Tbd_1370 4ca00f29f2022808392549ca4a57a14d 144 Gene3D G3DSA:2.60.40.790 2 144 8.8E-32 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_1370 4ca00f29f2022808392549ca4a57a14d 144 SUPERFAMILY SSF49764 16 143 2.13E-31 T 11-10-2018 IPR008978 HSP20-like chaperone Tbd_1370 4ca00f29f2022808392549ca4a57a14d 144 Pfam PF00011 Hsp20/alpha crystallin family 46 143 1.3E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 Gene3D G3DSA:3.20.20.210 395 762 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 320 1.1E-111 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 764 37.187 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 SUPERFAMILY SSF51726 3 400 1.96E-108 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 Gene3D G3DSA:3.20.20.210 6 530 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 763 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 SUPERFAMILY SSF51726 402 762 7.98E-121 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 PIRSF PIRSF000382 1 769 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Tbd_2286 47a31ff3c5fa1b1029f5392295d900e8 772 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 437 759 2.8E-153 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 295 2.7E-91 T 11-10-2018 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 289 2.5E-72 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 Gene3D G3DSA:3.40.50.150 107 296 6.5E-58 T 11-10-2018 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 295 32.249 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 PIRSF PIRSF000401 1 296 2.9E-93 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Tbd_0180 b2211f1895c943518597672e036b2cb6 296 SUPERFAMILY SSF53335 72 275 1.79E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2764 b33187e05cb9b7a291c4c57a073fd357 172 Gene3D G3DSA:3.30.240.20 76 148 2.7E-20 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Tbd_2764 b33187e05cb9b7a291c4c57a073fd357 172 Pfam PF04239 Protein of unknown function (DUF421) 85 147 5.9E-13 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Tbd_1377 81076af099df5286f8ea9437575df893 219 SUPERFAMILY SSF103501 8 209 5.23E-31 T 11-10-2018 IPR036197 NarG-like superfamily Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 PRINTS PR00502 NUDIX hydrolase family signature 35 49 2.3E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 PRINTS PR00502 NUDIX hydrolase family signature 49 64 2.3E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 Gene3D G3DSA:3.90.79.10 2 128 9.5E-35 T 11-10-2018 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 SUPERFAMILY SSF51391 117 311 7.85E-47 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 Gene3D G3DSA:3.20.20.70 129 312 2.0E-45 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 Pfam PF00293 NUDIX domain 8 117 2.7E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 SUPERFAMILY SSF55811 6 128 4.47E-34 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tbd_0027 81b4ef1d70c8874c45fac0bdeca9c425 312 Pfam PF02581 Thiamine monophosphate synthase 140 308 1.8E-39 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 PIRSF PIRSF000903 1 272 1.0E-109 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 SUPERFAMILY SSF56300 1 255 1.65E-56 T 11-10-2018 Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 Gene3D G3DSA:3.60.21.10 1 271 2.8E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 265 2.1E-81 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.382 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Tbd_0168 65baedfc3051f58f6f8cba1a95cc3ec9 273 Pfam PF00149 Calcineurin-like phosphoesterase 1 78 3.8E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_0199 2465648aca040ed45e96da248faf16fa 464 Pfam PF02397 Bacterial sugar transferase 275 458 1.4E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase Tbd_0199 2465648aca040ed45e96da248faf16fa 464 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 20 464 1.2E-162 T 11-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated Tbd_0199 2465648aca040ed45e96da248faf16fa 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 27 462 2.0E-124 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tbd_1892 9a50be09ba487d1900b1e168ed7b5290 88 PIRSF PIRSF003113 1 88 1.3E-26 T 11-10-2018 IPR002634 BolA protein Tbd_1892 9a50be09ba487d1900b1e168ed7b5290 88 SUPERFAMILY SSF82657 6 87 2.35E-29 T 11-10-2018 IPR036065 BolA-like superfamily Tbd_1892 9a50be09ba487d1900b1e168ed7b5290 88 Pfam PF01722 BolA-like protein 33 83 3.8E-20 T 11-10-2018 IPR002634 BolA protein Tbd_1892 9a50be09ba487d1900b1e168ed7b5290 88 Gene3D G3DSA:3.30.300.90 8 87 1.0E-31 T 11-10-2018 Tbd_0765 45dff81d24c578c6c0691225a4670279 323 Gene3D G3DSA:3.40.50.300 55 212 5.7E-15 T 11-10-2018 Tbd_0765 45dff81d24c578c6c0691225a4670279 323 SUPERFAMILY SSF52540 32 288 9.5E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0765 45dff81d24c578c6c0691225a4670279 323 SMART SM00382 69 235 4.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_0765 45dff81d24c578c6c0691225a4670279 323 Pfam PF13401 AAA domain 69 196 5.8E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1221 c59c5d48894e3583bb28f1b0202bfdfa 398 Gene3D G3DSA:3.90.1150.10 13 379 3.6E-114 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1221 c59c5d48894e3583bb28f1b0202bfdfa 398 Pfam PF00155 Aminotransferase class I and II 32 389 5.3E-44 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_1221 c59c5d48894e3583bb28f1b0202bfdfa 398 Gene3D G3DSA:3.40.640.10 43 290 3.6E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1221 c59c5d48894e3583bb28f1b0202bfdfa 398 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 394 6.7E-183 T 11-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 Tbd_1221 c59c5d48894e3583bb28f1b0202bfdfa 398 SUPERFAMILY SSF53383 2 394 4.13E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2560 714104b767f349589a38068a7c35cb50 107 Gene3D G3DSA:3.30.70.120 1 107 1.5E-39 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tbd_2560 714104b767f349589a38068a7c35cb50 107 SUPERFAMILY SSF54913 2 104 2.3E-37 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_2560 714104b767f349589a38068a7c35cb50 107 Pfam PF03091 CutA1 divalent ion tolerance protein 5 101 8.0E-36 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Tbd_0990 c53d5a725fb9119e069c47a193687612 349 Gene3D G3DSA:3.40.190.10 137 347 1.9E-121 T 11-10-2018 Tbd_0990 c53d5a725fb9119e069c47a193687612 349 SUPERFAMILY SSF53850 37 345 2.55E-83 T 11-10-2018 Tbd_0990 c53d5a725fb9119e069c47a193687612 349 Gene3D G3DSA:3.40.190.10 40 312 1.9E-121 T 11-10-2018 Tbd_0990 c53d5a725fb9119e069c47a193687612 349 PIRSF PIRSF002825 13 349 5.9E-99 T 11-10-2018 IPR026045 Ferric binding protein Tbd_0990 c53d5a725fb9119e069c47a193687612 349 Pfam PF13343 Bacterial extracellular solute-binding protein 84 314 1.8E-27 T 11-10-2018 Tbd_0842 ac6b86a5085387846be2d5efff811c68 426 Pfam PF00155 Aminotransferase class I and II 55 413 8.5E-51 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_0842 ac6b86a5085387846be2d5efff811c68 426 Gene3D G3DSA:3.40.640.10 73 314 1.5E-139 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0842 ac6b86a5085387846be2d5efff811c68 426 Gene3D G3DSA:3.90.1150.10 41 418 1.5E-139 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_0842 ac6b86a5085387846be2d5efff811c68 426 SUPERFAMILY SSF53383 23 421 7.37E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 271 3.3E-64 T 11-10-2018 Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 Gene3D G3DSA:3.40.190.10 114 223 2.5E-73 T 11-10-2018 Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 SUPERFAMILY SSF53850 42 253 1.35E-45 T 11-10-2018 Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 10 247 7.0E-76 T 11-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 3 281 6.7E-111 T 11-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 Tbd_2300 d58a32f6fd1bdd551907bf9446ffe02d 290 Gene3D G3DSA:3.40.190.10 30 251 2.5E-73 T 11-10-2018 Tbd_0305 4ddfdd9fcf1699282a13102928c878ea 341 Gene3D G3DSA:3.40.50.2000 89 329 8.2E-22 T 11-10-2018 Tbd_0305 4ddfdd9fcf1699282a13102928c878ea 341 Gene3D G3DSA:3.40.50.2000 158 320 8.2E-22 T 11-10-2018 Tbd_0305 4ddfdd9fcf1699282a13102928c878ea 341 SUPERFAMILY SSF53756 36 331 1.15E-29 T 11-10-2018 Tbd_0305 4ddfdd9fcf1699282a13102928c878ea 341 Pfam PF13692 Glycosyl transferases group 1 180 302 2.2E-15 T 11-10-2018 Tbd_0495 2a5c7b01e3b57705b9ef174d113dd046 504 Pfam PF00361 Proton-conducting membrane transporter 130 424 5.0E-43 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0495 2a5c7b01e3b57705b9ef174d113dd046 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.3E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0495 2a5c7b01e3b57705b9ef174d113dd046 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 383 409 1.3E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0495 2a5c7b01e3b57705b9ef174d113dd046 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 1.3E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0495 2a5c7b01e3b57705b9ef174d113dd046 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 1.3E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0574 7fd84408f47c637e3686e416fe16981e 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 11-10-2018 IPR001455 TusA-like domain Tbd_0574 7fd84408f47c637e3686e416fe16981e 75 Gene3D G3DSA:3.30.110.40 1 75 6.9E-30 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_0574 7fd84408f47c637e3686e416fe16981e 75 SUPERFAMILY SSF64307 3 74 4.19E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_0574 7fd84408f47c637e3686e416fe16981e 75 Pfam PF01206 Sulfurtransferase TusA 5 74 1.8E-23 T 11-10-2018 IPR001455 TusA-like domain Tbd_2166 0c0164ec49374d2489c9dd7a06b6889b 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.5E-58 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tbd_2166 0c0164ec49374d2489c9dd7a06b6889b 158 Pfam PF03477 ATP cone domain 50 136 5.8E-13 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tbd_2166 0c0164ec49374d2489c9dd7a06b6889b 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 82.989 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tbd_1111 3ad7193445c02057173f56c38e8fe1f9 131 PIRSF PIRSF029543 1 131 7.0E-33 T 11-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 SUPERFAMILY SSF55620 1 145 3.0E-38 T 11-10-2018 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 Gene3D G3DSA:3.30.479.10 1 147 7.0E-33 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 PIRSF PIRSF006113 1 79 1.9E-17 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 PIRSF PIRSF006113 96 147 6.4 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 116 6.0E-28 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_2184 348cef323b99708f84d1220cc38ac96d 149 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 145 8.5E-34 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 117 9.3E-56 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 139 53.697 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 SUPERFAMILY SSF55620 4 112 4.67E-27 T 11-10-2018 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 Pfam PF14489 QueF-like protein 40 118 1.9E-33 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 Gene3D G3DSA:3.30.1130.10 3 137 1.1E-45 T 11-10-2018 Tbd_1227 979a404e06408f3fb80fd0c8926c8bdc 139 PIRSF PIRSF027377 1 124 8.0E-55 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 Pfam PF00281 Ribosomal protein L5 24 80 2.9E-28 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.952 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 PIRSF PIRSF002161 1 179 2.0E-65 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 Gene3D G3DSA:3.30.1440.10 1 179 7.2E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 SUPERFAMILY SSF55282 3 179 1.81E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0417 8ebc4491193ff5df0442eaa3b9842460 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.8E-41 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_1024 478bae50762c4eccf621d92698e8b490 166 Gene3D G3DSA:2.20.25.120 47 79 1.4E-57 T 11-10-2018 Tbd_1024 478bae50762c4eccf621d92698e8b490 166 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 158 4.3E-47 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tbd_1024 478bae50762c4eccf621d92698e8b490 166 SUPERFAMILY SSF52540 1 159 6.62E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1024 478bae50762c4eccf621d92698e8b490 166 Gene3D G3DSA:3.40.50.300 5 156 1.4E-57 T 11-10-2018 Tbd_1024 478bae50762c4eccf621d92698e8b490 166 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 134 4.0E-52 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tbd_0056 c6ed24a674cdcb6e54ee86dd3acd6c51 444 Pfam PF08668 HDOD domain 255 362 4.5E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_0056 c6ed24a674cdcb6e54ee86dd3acd6c51 444 SUPERFAMILY SSF109604 221 440 1.26E-35 T 11-10-2018 Tbd_0056 c6ed24a674cdcb6e54ee86dd3acd6c51 444 Gene3D G3DSA:1.10.3210.10 231 389 1.5E-20 T 11-10-2018 Tbd_0056 c6ed24a674cdcb6e54ee86dd3acd6c51 444 PIRSF PIRSF003180 35 443 5.4E-64 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Tbd_0726 552ea9a58a38cc8578f9009509e35533 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 293 1.1E-79 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tbd_0726 552ea9a58a38cc8578f9009509e35533 313 Gene3D G3DSA:1.20.1510.10 22 215 7.3E-41 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_0726 552ea9a58a38cc8578f9009509e35533 313 SUPERFAMILY SSF160240 223 292 9.94E-7 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tbd_0726 552ea9a58a38cc8578f9009509e35533 313 Pfam PF01545 Cation efflux family 25 215 2.7E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tbd_0726 552ea9a58a38cc8578f9009509e35533 313 SUPERFAMILY SSF161111 21 216 6.67E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 227 8.3E-102 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 Gene3D G3DSA:3.30.190.20 23 225 1.4E-77 T 11-10-2018 Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.0E-51 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.059 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 PIRSF PIRSF002155 1 227 1.1E-77 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 Gene3D G3DSA:3.40.50.790 68 159 1.4E-77 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Tbd_0395 caea732b3cd55d00250b6ad9dbd3658e 231 SUPERFAMILY SSF56808 6 225 5.36E-81 T 11-10-2018 IPR023674 Ribosomal protein L1-like Tbd_1243 9bea45c8fd4f03e0e15a4d8bf933f358 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 5.5E-123 T 11-10-2018 IPR022522 Flagellar motor stator, MotA Tbd_1243 9bea45c8fd4f03e0e15a4d8bf933f358 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Tbd_1243 9bea45c8fd4f03e0e15a4d8bf933f358 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 238 1.8E-10 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_2427 a25ebc953d918752f1664445d442ff4e 67 Pfam PF04102 SlyX 3 67 3.5E-22 T 11-10-2018 IPR007236 SlyX Tbd_2427 a25ebc953d918752f1664445d442ff4e 67 Hamap MF_00715 Protein SlyX [slyX]. 1 67 13.92 T 11-10-2018 IPR007236 SlyX Tbd_0663 fc80deccf6a24513327a46bb826c145a 161 Pfam PF02308 MgtC family 25 149 5.5E-38 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_0663 fc80deccf6a24513327a46bb826c145a 161 PRINTS PR01837 MgtC/SapB protein signature 28 47 1.8E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_0663 fc80deccf6a24513327a46bb826c145a 161 PRINTS PR01837 MgtC/SapB protein signature 47 65 1.8E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_0663 fc80deccf6a24513327a46bb826c145a 161 PRINTS PR01837 MgtC/SapB protein signature 103 127 1.8E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_0663 fc80deccf6a24513327a46bb826c145a 161 PRINTS PR01837 MgtC/SapB protein signature 74 96 1.8E-40 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_2090 4d43f789b97625b78462cd37f92c2ea1 81 SUPERFAMILY SSF52833 3 78 1.92E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2090 4d43f789b97625b78462cd37f92c2ea1 81 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 77 1.2E-11 T 11-10-2018 IPR008554 Glutaredoxin-like Tbd_2090 4d43f789b97625b78462cd37f92c2ea1 81 Gene3D G3DSA:3.40.30.10 1 78 8.3E-18 T 11-10-2018 Tbd_2062 fe06665577688dbbe3c991c27bc49069 332 SUPERFAMILY SSF53067 1 317 3.95E-51 T 11-10-2018 Tbd_2062 fe06665577688dbbe3c991c27bc49069 332 Gene3D G3DSA:3.40.367.20 102 303 8.3E-95 T 11-10-2018 Tbd_2062 fe06665577688dbbe3c991c27bc49069 332 Pfam PF02685 Glucokinase 4 316 8.8E-86 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Tbd_2062 fe06665577688dbbe3c991c27bc49069 332 Gene3D G3DSA:3.30.420.40 4 313 8.3E-95 T 11-10-2018 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 16 116 1.9E-31 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 ProSitePatterns PS01344 Frataxin family signature. 61 75 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 15 116 20.734 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 SUPERFAMILY SSF55387 14 113 1.74E-25 T 11-10-2018 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 Gene3D G3DSA:3.30.920.10 12 116 5.2E-29 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 Pfam PF01491 Frataxin-like domain 16 112 5.5E-19 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_0227 292aad0a295e55338e4b03ef30d368e0 116 SMART SM01219 15 115 2.6E-36 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Tbd_2018 2617d8f8243745b464662b36932631c2 342 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 3 335 1.9E-116 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Tbd_2018 2617d8f8243745b464662b36932631c2 342 Pfam PF03116 NQR2, RnfD, RnfE family 2 334 2.2E-97 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Tbd_2018 2617d8f8243745b464662b36932631c2 342 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 1 336 25.153 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Tbd_0343 ade09e015be14da818ec8ffb96030c60 260 Pfam PF05751 FixH 148 257 4.9E-12 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH Tbd_1845 9b0b6f1801cb68baca120b44899e958b 181 Gene3D G3DSA:3.40.50.880 1 180 1.8E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1845 9b0b6f1801cb68baca120b44899e958b 181 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 176 2.2E-58 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Tbd_1845 9b0b6f1801cb68baca120b44899e958b 181 SUPERFAMILY SSF52317 1 179 8.84E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Tbd_1845 9b0b6f1801cb68baca120b44899e958b 181 Pfam PF01965 DJ-1/PfpI family 2 163 6.2E-48 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Tbd_2107 dcc967db88c0a27e1fc638b684f3fd8f 188 Gene3D G3DSA:2.70.40.10 1 159 1.1E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily Tbd_2107 dcc967db88c0a27e1fc638b684f3fd8f 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.0E-46 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Tbd_2107 dcc967db88c0a27e1fc638b684f3fd8f 188 Pfam PF00692 dUTPase 80 183 7.0E-7 T 11-10-2018 IPR029054 dUTPase-like Tbd_2107 dcc967db88c0a27e1fc638b684f3fd8f 188 SUPERFAMILY SSF51283 3 188 4.06E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily Tbd_2107 dcc967db88c0a27e1fc638b684f3fd8f 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 27.94 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Tbd_0714 6602c2a6ac994b47f6ef813df1b1f0c7 362 Pfam PF03929 PepSY-associated TM region 9 354 2.9E-62 T 11-10-2018 IPR005625 PepSY-associated TM protein Tbd_0714 6602c2a6ac994b47f6ef813df1b1f0c7 362 Pfam PF03413 Peptidase propeptide and YPEB domain 59 111 2.7E-5 T 11-10-2018 IPR025711 PepSY domain Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 Gene3D G3DSA:2.40.50.460 449 564 4.0E-9 T 11-10-2018 Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 Gene3D G3DSA:3.10.310.30 324 448 2.3E-29 T 11-10-2018 Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 Pfam PF01368 DHH family 75 201 2.9E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 26 558 2.2E-140 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 SUPERFAMILY SSF64182 48 460 5.62E-115 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 Pfam PF02272 DHHA1 domain 319 446 4.4E-23 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tbd_1771 b739b0f44b3c804de9fbb09c56cf97c5 565 Gene3D G3DSA:3.90.1640.30 49 323 1.0E-85 T 11-10-2018 Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 Gene3D G3DSA:3.40.50.1820 34 318 3.3E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 SUPERFAMILY SSF53474 43 317 4.52E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 Pfam PF12146 Serine aminopeptidase, S33 69 300 1.4E-56 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 3.0E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 146 159 3.0E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_1305 c75044af5d1632424fe3185fc1605b69 341 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 3.0E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_2605 546be8acd9363a4e1ae3654f503d5ead 145 SUPERFAMILY SSF88723 9 125 3.08E-13 T 11-10-2018 IPR029060 PIN-like domain superfamily Tbd_2605 546be8acd9363a4e1ae3654f503d5ead 145 Pfam PF13470 PIN domain 9 118 1.5E-26 T 11-10-2018 IPR002716 PIN domain Tbd_2605 546be8acd9363a4e1ae3654f503d5ead 145 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 9 122 6.4E-11 T 11-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component Tbd_2408 de6be68979f72cefb042c8da35c512bc 426 Gene3D G3DSA:3.40.50.11280 65 203 1.8E-49 T 11-10-2018 Tbd_2408 de6be68979f72cefb042c8da35c512bc 426 Pfam PF08886 Glutamate-cysteine ligase 17 418 5.5E-207 T 11-10-2018 IPR011718 Glutamate--cysteine ligase GshA Tbd_2408 de6be68979f72cefb042c8da35c512bc 426 SUPERFAMILY SSF56059 268 355 4.37E-6 T 11-10-2018 Tbd_2408 de6be68979f72cefb042c8da35c512bc 426 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 420 4.2E-196 T 11-10-2018 IPR011718 Glutamate--cysteine ligase GshA Tbd_2444 96706406f576c258816567cd7d2ef3ae 163 Gene3D G3DSA:3.30.160.150 31 161 8.4E-43 T 11-10-2018 Tbd_2444 96706406f576c258816567cd7d2ef3ae 163 Pfam PF04390 Lipopolysaccharide-assembly 31 156 9.8E-14 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Tbd_2444 96706406f576c258816567cd7d2ef3ae 163 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 3 161 22.185 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Tbd_0368 6f096d08d97702d48564d33816b4e7b8 239 SUPERFAMILY SSF56059 22 219 2.94E-52 T 11-10-2018 Tbd_0368 6f096d08d97702d48564d33816b4e7b8 239 Gene3D G3DSA:3.30.1490.20 28 217 5.8E-62 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tbd_0368 6f096d08d97702d48564d33816b4e7b8 239 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 67 126 9.9E-8 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tbd_0368 6f096d08d97702d48564d33816b4e7b8 239 Gene3D G3DSA:1.20.80.30 117 210 5.8E-62 T 11-10-2018 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 3 285 37.786 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 283 2.5E-100 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 Gene3D G3DSA:3.40.1010.20 99 195 3.1E-114 T 11-10-2018 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 Gene3D G3DSA:3.40.1010.20 8 281 3.1E-114 T 11-10-2018 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 Pfam PF02401 LytB protein 5 281 7.6E-94 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tbd_1860 bc80703f4aee6afd5d9a78a712a4699d 308 Gene3D G3DSA:3.40.50.11270 14 98 3.1E-114 T 11-10-2018 Tbd_2191 274a3a4d327e63ce16e11cfe795b2c52 155 SUPERFAMILY SSF52121 10 155 4.06E-55 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2191 274a3a4d327e63ce16e11cfe795b2c52 155 Gene3D G3DSA:3.40.50.960 10 155 4.9E-53 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2191 274a3a4d327e63ce16e11cfe795b2c52 155 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 19 151 4.8E-40 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2191 274a3a4d327e63ce16e11cfe795b2c52 155 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 15 155 28.136 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_2191 274a3a4d327e63ce16e11cfe795b2c52 155 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 18 152 2.4E-50 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 SUPERFAMILY SSF64518 138 447 4.45E-25 T 11-10-2018 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 SUPERFAMILY SSF64518 443 625 6.28E-26 T 11-10-2018 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 585 626 3.5E-11 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 362 384 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.7E-22 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 Pfam PF00460 Flagella basal body rod protein 8 35 9.3E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tbd_1628 2aa37f253b8bac11938d60844b3a76dc 629 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 348 4.1E-87 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tbd_0973 b4e6b1af86bdfe5458e5dff430e1b105 485 Pfam PF13598 Domain of unknown function (DUF4139) 189 481 6.7E-9 T 11-10-2018 IPR037291 Domain of unknown function DUF4139 Tbd_1583 93ee5e67b69921a48d26e36ca21168ab 241 Pfam PF00005 ABC transporter 31 174 6.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tbd_1583 93ee5e67b69921a48d26e36ca21168ab 241 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tbd_1583 93ee5e67b69921a48d26e36ca21168ab 241 SUPERFAMILY SSF52540 14 229 3.39E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1583 93ee5e67b69921a48d26e36ca21168ab 241 Gene3D G3DSA:3.40.50.300 10 239 1.9E-64 T 11-10-2018 Tbd_1583 93ee5e67b69921a48d26e36ca21168ab 241 SMART SM00382 40 223 2.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Tbd_1076 2e64d71ef8fc5e78057d5484251dced7 248 Gene3D G3DSA:3.40.50.150 1 248 1.3E-101 T 11-10-2018 Tbd_1076 2e64d71ef8fc5e78057d5484251dced7 248 SUPERFAMILY SSF53335 5 243 4.11E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1076 2e64d71ef8fc5e78057d5484251dced7 248 PIRSF PIRSF034653 1 248 4.9E-117 T 11-10-2018 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type Tbd_1076 2e64d71ef8fc5e78057d5484251dced7 248 Pfam PF13847 Methyltransferase domain 36 159 1.2E-10 T 11-10-2018 IPR025714 Methyltransferase domain Tbd_0433 6c57f71df1c3be7d213bbf89e875735a 424 Gene3D G3DSA:3.40.1480.10 261 416 3.8E-132 T 11-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Tbd_0433 6c57f71df1c3be7d213bbf89e875735a 424 Pfam PF05161 MOFRL family 312 416 4.4E-35 T 11-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Tbd_0433 6c57f71df1c3be7d213bbf89e875735a 424 Pfam PF13660 Domain of unknown function (DUF4147) 14 232 1.2E-76 T 11-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Tbd_0433 6c57f71df1c3be7d213bbf89e875735a 424 Gene3D G3DSA:3.40.50.10180 37 260 3.8E-132 T 11-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Tbd_0433 6c57f71df1c3be7d213bbf89e875735a 424 SUPERFAMILY SSF82544 6 422 1.06E-133 T 11-10-2018 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 Pfam PF00297 Ribosomal protein L3 63 185 8.4E-18 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 3.1E-86 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 Gene3D G3DSA:2.40.30.10 130 213 1.8E-15 T 11-10-2018 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 Gene3D G3DSA:2.40.50.620 32 96 7.6E-16 T 11-10-2018 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.719 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0405 234d06d77f4a1856b839342275ec1944 214 SUPERFAMILY SSF50447 1 211 1.41E-78 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tbd_0405 234d06d77f4a1856b839342275ec1944 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 SMART SM00411 1 90 2.3E-38 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 Gene3D G3DSA:4.10.520.10 1 97 7.7E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.2E-28 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 SUPERFAMILY SSF47729 1 92 5.45E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.3E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.3E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0007 c32700a1b6ee76900ac7ed48de0c5961 98 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.3E-14 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 PRINTS PR01035 Tetracycline resistance protein signature 137 159 1.0E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 PRINTS PR01035 Tetracycline resistance protein signature 18 34 1.0E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 PRINTS PR01035 Tetracycline resistance protein signature 46 65 1.0E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 PRINTS PR01035 Tetracycline resistance protein signature 268 289 1.0E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 Pfam PF07690 Major Facilitator Superfamily 13 233 1.2E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 Gene3D G3DSA:1.20.1250.20 1 388 6.2E-82 T 11-10-2018 Tbd_0437 48e89b4ce25c38a3cf586db00989a087 453 SUPERFAMILY SSF103473 1 385 7.32E-64 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 Pfam PF00210 Ferritin-like domain 8 144 2.9E-36 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 SUPERFAMILY SSF47240 1 152 9.38E-54 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PIRSF PIRSF002560 1 157 2.3E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 Gene3D G3DSA:1.20.1260.10 1 155 8.7E-67 T 11-10-2018 IPR012347 Ferritin-like Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 23 43 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 3 22 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 65 85 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 86 106 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 107 127 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 128 149 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 PRINTS PR00601 Bacterioferritin signature 44 64 6.3E-66 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_0704 3337f4e35cc4bfb5d7112afebc5057b7 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 8.0E-73 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Tbd_2345 39426e7ce7349b6a4519c8cd4c9bc7f0 240 SUPERFAMILY SSF69593 6 235 1.23E-39 T 11-10-2018 Tbd_2345 39426e7ce7349b6a4519c8cd4c9bc7f0 240 Pfam PF01553 Acyltransferase 60 182 3.8E-17 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_2345 39426e7ce7349b6a4519c8cd4c9bc7f0 240 SMART SM00563 71 185 1.9E-30 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tbd_1995 14163bb3eddee977f87a89c1e6e39cc6 145 Pfam PF06271 RDD family 11 135 1.2E-21 T 11-10-2018 IPR010432 RDD Tbd_0384 58b5118640427da3032a9419f8daa726 592 Gene3D G3DSA:1.25.40.10 246 371 4.5E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SUPERFAMILY SSF48452 411 581 1.19E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 Gene3D G3DSA:1.25.40.10 54 240 1.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SUPERFAMILY SSF48452 179 368 2.23E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 Pfam PF13429 Tetratricopeptide repeat 301 569 6.5E-9 T 11-10-2018 Tbd_0384 58b5118640427da3032a9419f8daa726 592 Pfam PF13432 Tetratricopeptide repeat 185 235 5.0E-4 T 11-10-2018 Tbd_0384 58b5118640427da3032a9419f8daa726 592 Gene3D G3DSA:1.25.40.10 372 590 9.6E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 445 478 47.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 308 341 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 479 513 3.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 207 240 13.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 547 580 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0384 58b5118640427da3032a9419f8daa726 592 SMART SM00028 141 174 210.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_2516 48bf80fff0b7d8c575c64ab3b4a4866d 509 SUPERFAMILY SSF48452 58 253 1.95E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_1722 6b94fe1a677f0552f7170326474213fb 350 Gene3D G3DSA:3.40.50.150 158 337 4.8E-22 T 11-10-2018 Tbd_1722 6b94fe1a677f0552f7170326474213fb 350 Pfam PF08241 Methyltransferase domain 227 278 1.8E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tbd_1722 6b94fe1a677f0552f7170326474213fb 350 SUPERFAMILY SSF53335 154 323 2.26E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1570 0d34c2318c175251481b3e5c17dce948 424 Pfam PF03631 Virulence factor BrkB 29 275 4.3E-24 T 11-10-2018 IPR017039 Virulence factor BrkB Tbd_1570 0d34c2318c175251481b3e5c17dce948 424 Pfam PF00027 Cyclic nucleotide-binding domain 317 399 6.1E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_1570 0d34c2318c175251481b3e5c17dce948 424 SUPERFAMILY SSF51206 315 419 4.45E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Tbd_1570 0d34c2318c175251481b3e5c17dce948 424 SMART SM00100 287 412 1.8E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Tbd_1570 0d34c2318c175251481b3e5c17dce948 424 Gene3D G3DSA:2.60.120.10 309 423 5.9E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 Gene3D G3DSA:3.40.640.10 21 268 2.4E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 PIRSF PIRSF000524 4 376 4.8E-115 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 SUPERFAMILY SSF53383 8 372 1.67E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 Gene3D G3DSA:3.90.1150.10 8 370 2.4E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 Pfam PF00266 Aminotransferase class-V 11 351 7.4E-35 T 11-10-2018 IPR000192 Aminotransferase class V domain Tbd_2509 af0cae00306ad95a45cb2fbc2aa44a12 377 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 208 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tbd_0313 0c0f93b8136a892deb16c70d06ae8aa9 342 SUPERFAMILY SSF53448 9 311 2.0E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0313 0c0f93b8136a892deb16c70d06ae8aa9 342 Pfam PF00535 Glycosyl transferase family 2 18 66 6.1E-5 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0313 0c0f93b8136a892deb16c70d06ae8aa9 342 Pfam PF00535 Glycosyl transferase family 2 111 175 9.2E-7 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_2304 1712d692b57cf8e4542ef53250881a97 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 9.1E-27 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tbd_2304 1712d692b57cf8e4542ef53250881a97 84 SUPERFAMILY SSF55229 36 83 7.72E-14 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tbd_2304 1712d692b57cf8e4542ef53250881a97 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 17.396 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tbd_2304 1712d692b57cf8e4542ef53250881a97 84 Gene3D G3DSA:3.30.1070.10 1 82 3.0E-25 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tbd_2304 1712d692b57cf8e4542ef53250881a97 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 81 5.3E-24 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tbd_2359 087f69a1d0341da23e8584889cb26acc 476 SUPERFAMILY SSF103365 6 476 7.32E-159 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tbd_2359 087f69a1d0341da23e8584889cb26acc 476 Gene3D G3DSA:3.90.1860.10 3 476 3.8E-177 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tbd_2359 087f69a1d0341da23e8584889cb26acc 476 Pfam PF01139 tRNA-splicing ligase RtcB 45 476 1.3E-146 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tbd_2499 866a5c0c5c706f4975648ab0ed6a93a3 106 PIRSF PIRSF005894 1 106 2.4E-48 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Tbd_2499 866a5c0c5c706f4975648ab0ed6a93a3 106 SUPERFAMILY SSF52833 3 103 7.11E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2499 866a5c0c5c706f4975648ab0ed6a93a3 106 Pfam PF00462 Glutaredoxin 16 81 4.4E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Tbd_2499 866a5c0c5c706f4975648ab0ed6a93a3 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.1E-46 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related Tbd_2499 866a5c0c5c706f4975648ab0ed6a93a3 106 Gene3D G3DSA:3.40.30.10 6 103 2.5E-30 T 11-10-2018 Tbd_1577 b2407b240937207d436123bcca3efeac 370 Gene3D G3DSA:3.20.20.70 1 354 2.9E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1577 b2407b240937207d436123bcca3efeac 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 2.1E-63 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Tbd_1577 b2407b240937207d436123bcca3efeac 370 SUPERFAMILY SSF51395 2 353 1.1E-115 T 11-10-2018 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 Gene3D G3DSA:2.40.50.100 538 613 1.5E-22 T 11-10-2018 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 Pfam PF00364 Biotin-requiring enzyme 547 612 3.3E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 SUPERFAMILY SSF51230 537 612 1.7E-20 T 11-10-2018 IPR011053 Single hybrid motif Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 Pfam PF02436 Conserved carboxylase domain 291 481 5.9E-55 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 Pfam PF00682 HMGL-like 4 269 7.4E-46 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 608 1.3E-251 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 SUPERFAMILY SSF51569 1 299 8.97E-92 T 11-10-2018 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 Gene3D G3DSA:3.20.20.70 1 449 2.6E-172 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 SUPERFAMILY SSF89000 296 447 1.69E-50 T 11-10-2018 Tbd_1556 1fa5c24eb8c77130ce2d9a9419cce5d7 615 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 569 586 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tbd_0744 f4fea53607bb75bc7fa9e3fcf27c9de9 189 Gene3D G3DSA:1.20.1260.10 33 180 8.1E-10 T 11-10-2018 IPR012347 Ferritin-like Tbd_0744 f4fea53607bb75bc7fa9e3fcf27c9de9 189 Pfam PF13628 Domain of unknown function (DUF4142) 42 176 1.7E-42 T 11-10-2018 IPR025419 Domain of unknown function DUF4142 Tbd_0868 539e6b68004cc6f844b09639007d70f2 705 SUPERFAMILY SSF53300 520 703 9.06E-23 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0868 539e6b68004cc6f844b09639007d70f2 705 Gene3D G3DSA:3.40.50.410 514 698 2.8E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_0868 539e6b68004cc6f844b09639007d70f2 705 SMART SM00327 519 704 3.6E-12 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_0868 539e6b68004cc6f844b09639007d70f2 705 Pfam PF13519 von Willebrand factor type A domain 522 629 2.2E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 Pfam PF12796 Ankyrin repeats (3 copies) 172 258 9.1E-12 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 Gene3D G3DSA:1.25.40.20 89 296 2.2E-46 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SUPERFAMILY SSF48403 106 293 1.02E-41 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 266 295 0.51 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 135 164 25.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 233 262 0.3 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 200 229 1.5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 167 196 8.6E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_0361 c701fd2c19aa6335f3a9325a04908f97 301 SMART SM00248 102 131 480.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tbd_2125 b9d504ec584a8ee9b040293935d6d3b6 227 Gene3D G3DSA:3.40.50.150 21 227 2.0E-65 T 11-10-2018 Tbd_2125 b9d504ec584a8ee9b040293935d6d3b6 227 Pfam PF02390 Putative methyltransferase 56 222 1.9E-55 T 11-10-2018 Tbd_2125 b9d504ec584a8ee9b040293935d6d3b6 227 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 15 227 30.239 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Tbd_2125 b9d504ec584a8ee9b040293935d6d3b6 227 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 44 226 1.3E-54 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Tbd_2125 b9d504ec584a8ee9b040293935d6d3b6 227 SUPERFAMILY SSF53335 10 226 1.44E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0514 87aa019892418dcddb10f96f793614fe 358 Gene3D G3DSA:3.20.20.70 3 351 1.4E-158 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_0514 87aa019892418dcddb10f96f793614fe 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 350 1.2E-161 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tbd_0514 87aa019892418dcddb10f96f793614fe 358 Pfam PF00793 DAHP synthetase I family 45 336 5.5E-104 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tbd_0514 87aa019892418dcddb10f96f793614fe 358 SUPERFAMILY SSF51569 9 349 2.41E-135 T 11-10-2018 Tbd_0514 87aa019892418dcddb10f96f793614fe 358 PIRSF PIRSF001361 1 353 1.3E-158 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tbd_1045 823124ee2dab21c9aa61cb60664d5369 412 Pfam PF07670 Nucleoside recognition 50 157 1.5E-9 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tbd_1045 823124ee2dab21c9aa61cb60664d5369 412 PIRSF PIRSF036542 1 409 6.1E-187 T 11-10-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB Tbd_2597 f3e55a4a9a71e1b041c7370659f23760 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 11-10-2018 IPR020845 AMP-binding, conserved site Tbd_2597 f3e55a4a9a71e1b041c7370659f23760 602 Gene3D G3DSA:3.40.50.12780 6 308 3.8E-59 T 11-10-2018 Tbd_2597 f3e55a4a9a71e1b041c7370659f23760 602 Gene3D G3DSA:3.40.50.12780 324 462 1.7E-39 T 11-10-2018 Tbd_2597 f3e55a4a9a71e1b041c7370659f23760 602 SUPERFAMILY SSF56801 4 597 3.92E-127 T 11-10-2018 Tbd_2597 f3e55a4a9a71e1b041c7370659f23760 602 Pfam PF00501 AMP-binding enzyme 16 469 8.1E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tbd_0926 714d5b2c21a8fd886cb4aeccab0af02b 216 Pfam PF13643 Domain of unknown function (DUF4145) 102 188 8.2E-15 T 11-10-2018 IPR025285 Domain of unknown function DUF4145 Tbd_0139 d0a2301d37b781f9aa88a7748469e8fa 218 Pfam PF01292 Prokaryotic cytochrome b561 22 205 5.8E-32 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Tbd_0139 d0a2301d37b781f9aa88a7748469e8fa 218 Gene3D G3DSA:1.20.950.20 12 194 8.4E-24 T 11-10-2018 Tbd_0139 d0a2301d37b781f9aa88a7748469e8fa 218 SUPERFAMILY SSF81342 18 209 5.73E-32 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tbd_2452 f82a4b9f7e62715e6b23f37ccc4ae7fe 242 Gene3D G3DSA:3.40.50.450 25 224 1.2E-63 T 11-10-2018 Tbd_2452 f82a4b9f7e62715e6b23f37ccc4ae7fe 242 SUPERFAMILY SSF102405 20 221 7.78E-61 T 11-10-2018 Tbd_2452 f82a4b9f7e62715e6b23f37ccc4ae7fe 242 Pfam PF03641 Possible lysine decarboxylase 90 220 6.2E-32 T 11-10-2018 IPR031100 LOG family Tbd_2452 f82a4b9f7e62715e6b23f37ccc4ae7fe 242 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 48 220 8.8E-45 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Tbd_1508 53a43d9d3f356b6b48ce468c3bac7787 329 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 313 1.6E-65 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tbd_1508 53a43d9d3f356b6b48ce468c3bac7787 329 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 15 327 1.3E-102 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tbd_1508 53a43d9d3f356b6b48ce468c3bac7787 329 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 328 38.688 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Tbd_1508 53a43d9d3f356b6b48ce468c3bac7787 329 SUPERFAMILY SSF52540 48 155 1.49E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 Pfam PF00571 CBS domain 11 57 1.1E-5 T 11-10-2018 IPR000644 CBS domain Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 Pfam PF00571 CBS domain 71 124 3.7E-9 T 11-10-2018 IPR000644 CBS domain Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 SUPERFAMILY SSF54631 8 129 5.81E-27 T 11-10-2018 Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 SMART SM00116 78 125 9.2E-4 T 11-10-2018 IPR000644 CBS domain Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 SMART SM00116 13 60 6.7E-6 T 11-10-2018 IPR000644 CBS domain Tbd_1844 b6b9d3148a875843c2c546ed335f0be7 144 Gene3D G3DSA:3.10.580.10 1 130 2.8E-33 T 11-10-2018 Tbd_2194 763c53cbd5e6536bee13bfda07cf5634 159 Pfam PF04608 Phosphatidylglycerophosphatase A 13 154 3.7E-50 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Tbd_2194 763c53cbd5e6536bee13bfda07cf5634 159 PIRSF PIRSF006162 4 159 1.6E-44 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Tbd_2194 763c53cbd5e6536bee13bfda07cf5634 159 SUPERFAMILY SSF101307 8 155 4.84E-38 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Tbd_1423 c4d3d33fdaf1ddfdbdb97fc0895775bb 442 Gene3D G3DSA:2.120.10.30 181 438 2.2E-5 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tbd_1423 c4d3d33fdaf1ddfdbdb97fc0895775bb 442 Pfam PF05787 Bacterial protein of unknown function (DUF839) 169 421 1.2E-21 T 11-10-2018 IPR008557 Protein of unknown function DUF839 Tbd_1423 c4d3d33fdaf1ddfdbdb97fc0895775bb 442 SUPERFAMILY SSF63829 109 423 4.9E-8 T 11-10-2018 Tbd_1248 aea4aa427fedbd9f008af5c29a3a6871 267 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 208 1.5E-9 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tbd_1248 aea4aa427fedbd9f008af5c29a3a6871 267 Gene3D G3DSA:3.40.50.300 1 234 1.5E-40 T 11-10-2018 Tbd_1248 aea4aa427fedbd9f008af5c29a3a6871 267 SUPERFAMILY SSF52540 2 238 1.23E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0790 b0d2b4efcada903bdd7372b22d567857 268 Pfam PF01148 Cytidylyltransferase family 7 259 2.2E-54 T 11-10-2018 Tbd_0790 b0d2b4efcada903bdd7372b22d567857 268 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 222 248 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Tbd_1035 c4702ab192ac11f776d6993682dda14f 152 SUPERFAMILY SSF103247 24 151 7.72E-17 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_1035 c4702ab192ac11f776d6993682dda14f 152 Pfam PF03625 Domain of unknown function DUF302 80 125 4.4E-8 T 11-10-2018 IPR005180 Domain of unknown function DUF302 Tbd_1035 c4702ab192ac11f776d6993682dda14f 152 Gene3D G3DSA:3.30.310.70 21 151 1.0E-8 T 11-10-2018 IPR035923 TT1751-like domain superfamily Tbd_1493 e498bf426736355b2ec9eab84753ae07 226 SMART SM00953 77 204 1.8E-37 T 11-10-2018 IPR014914 RES domain Tbd_1493 e498bf426736355b2ec9eab84753ae07 226 Pfam PF08808 RES domain 68 210 6.4E-31 T 11-10-2018 IPR014914 RES domain Tbd_1609 3a2c8ae8b2b4abb6f96c34f137ae2c03 144 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 38 105 9.5E-22 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tbd_1609 3a2c8ae8b2b4abb6f96c34f137ae2c03 144 Pfam PF04347 Flagellar biosynthesis protein, FliO 50 132 8.3E-20 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 125 137 3.4E-22 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 396 410 3.4E-22 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 181 200 3.4E-22 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 373 395 3.4E-22 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 SUPERFAMILY SSF53335 89 438 3.69E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1491 0683af633f53759f2dc39604c95c72d3 779 Pfam PF01555 DNA methylase 126 424 2.9E-43 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tbd_0194 b73e61511d67e545d8b110092f10cb81 285 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 260 284 3.0E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0194 b73e61511d67e545d8b110092f10cb81 285 Pfam PF07589 PEP-CTERM motif 259 283 8.3E-8 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_2198 758743a7f89f25f9ad139c94bb91f76e 153 Gene3D G3DSA:1.10.10.10 59 100 2.4E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2198 758743a7f89f25f9ad139c94bb91f76e 153 Gene3D G3DSA:1.10.10.10 105 151 2.8E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2198 758743a7f89f25f9ad139c94bb91f76e 153 Pfam PF02631 RecX family 34 148 1.3E-30 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Tbd_2198 758743a7f89f25f9ad139c94bb91f76e 153 Hamap MF_01114 Regulatory protein RecX [recX]. 5 151 14.059 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Tbd_2198 758743a7f89f25f9ad139c94bb91f76e 153 Gene3D G3DSA:1.10.10.10 11 56 9.7E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1037 93a8c8f0a4746a58662889381e772c1a 104 Gene3D G3DSA:3.30.70.120 1 94 2.4E-21 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tbd_1037 93a8c8f0a4746a58662889381e772c1a 104 Pfam PF02641 Uncharacterized ACR, COG1993 6 84 1.0E-17 T 11-10-2018 IPR003793 Domain of unknown function DUF190 Tbd_1037 93a8c8f0a4746a58662889381e772c1a 104 SUPERFAMILY SSF54913 1 100 5.0E-24 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tbd_0156 bdf5385e6fc3051b4f2e6beedbea94c2 186 Gene3D G3DSA:3.40.30.10 9 186 2.7E-44 T 11-10-2018 Tbd_0156 bdf5385e6fc3051b4f2e6beedbea94c2 186 SUPERFAMILY SSF52833 5 185 9.51E-47 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0156 bdf5385e6fc3051b4f2e6beedbea94c2 186 Pfam PF00578 AhpC/TSA family 12 132 1.2E-15 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_2026 6c095c51785ffe4e1302b37d548af881 107 Gene3D G3DSA:1.10.760.10 23 101 9.3E-28 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2026 6c095c51785ffe4e1302b37d548af881 107 SUPERFAMILY SSF46626 5 103 2.12E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2026 6c095c51785ffe4e1302b37d548af881 107 Pfam PF00034 Cytochrome c 26 101 1.1E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 SUPERFAMILY SSF55315 5 101 9.65E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 Pfam PF00588 SpoU rRNA Methylase family 113 249 5.0E-32 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 Gene3D G3DSA:3.40.1280.10 108 260 1.8E-45 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 SUPERFAMILY SSF75217 99 257 1.24E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 SMART SM00967 34 106 0.0037 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tbd_0615 d9372c54cb4761f5ef6d5e545b9adb92 260 Gene3D G3DSA:3.30.1330.30 5 102 3.1E-10 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 SUPERFAMILY SSF56176 5 216 4.67E-65 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 Gene3D G3DSA:3.30.70.2740 334 415 1.7E-7 T 11-10-2018 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 454 9.0E-65 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 SUPERFAMILY SSF55103 189 457 2.45E-75 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 Gene3D G3DSA:3.30.465.40 5 234 1.7E-59 T 11-10-2018 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 Gene3D G3DSA:1.10.45.10 416 456 1.3E-6 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Tbd_0047 a920322514e613a5ea24c04f89e1966b 483 Pfam PF01565 FAD binding domain 41 179 2.5E-37 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tbd_1965 c23b078466465bee2ebdcd5179826800 60 SUPERFAMILY SSF158442 2 56 1.31E-7 T 11-10-2018 IPR023380 DsbB-like superfamily Tbd_1965 c23b078466465bee2ebdcd5179826800 60 Gene3D G3DSA:1.20.1550.10 1 59 5.4E-8 T 11-10-2018 IPR023380 DsbB-like superfamily Tbd_1965 c23b078466465bee2ebdcd5179826800 60 Pfam PF02600 Disulfide bond formation protein DsbB 2 56 3.9E-6 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Tbd_1714 6368c332510cdeb19c217e4fca555011 136 Pfam PF01475 Ferric uptake regulator family 19 110 1.8E-18 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Tbd_1714 6368c332510cdeb19c217e4fca555011 136 Gene3D G3DSA:1.10.10.10 3 85 5.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1714 6368c332510cdeb19c217e4fca555011 136 SUPERFAMILY SSF46785 8 129 3.14E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0895 773951bd9fb1d9480eea61b5f343d637 90 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 15 56 1.1E-5 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tbd_0895 773951bd9fb1d9480eea61b5f343d637 90 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 38 67 1.8E-5 T 11-10-2018 Tbd_0895 773951bd9fb1d9480eea61b5f343d637 90 SUPERFAMILY SSF143120 15 61 6.54E-7 T 11-10-2018 IPR036165 YefM-like superfamily Tbd_1156 5a200362e7af9dfc3a10d604ac0b7d8a 100 Pfam PF10993 Protein of unknown function (DUF2818) 5 96 3.3E-38 T 11-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane Tbd_1156 5a200362e7af9dfc3a10d604ac0b7d8a 100 PIRSF PIRSF019883 1 100 4.7E-36 T 11-10-2018 IPR016768 Uncharacterised conserved protein UCP019883, membrane Tbd_0643 67ef4a9a63a5d7e0c427dd2adfb6031a 473 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 9 440 8.9E-119 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0643 67ef4a9a63a5d7e0c427dd2adfb6031a 473 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 5 464 4.3E-227 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Tbd_0643 67ef4a9a63a5d7e0c427dd2adfb6031a 473 Gene3D G3DSA:1.20.210.10 1 467 1.9E-208 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0643 67ef4a9a63a5d7e0c427dd2adfb6031a 473 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 200 255 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0643 67ef4a9a63a5d7e0c427dd2adfb6031a 473 SUPERFAMILY SSF81442 5 465 8.5E-129 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2251 ce257ab537195182a6aae3e6647264ac 103 Pfam PF04972 BON domain 35 103 7.1E-20 T 11-10-2018 IPR007055 BON domain Tbd_2251 ce257ab537195182a6aae3e6647264ac 103 SMART SM00749 40 103 7.0E-5 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 PIRSF PIRSF038455 1 281 6.2E-91 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 SUPERFAMILY SSF46626 172 280 8.06E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 75 281 1.4E-66 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 SUPERFAMILY SSF46626 48 167 3.61E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 Gene3D G3DSA:1.10.760.10 30 164 5.3E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0564 5efd65bbba69f73427c1a60a361a5aa5 281 Gene3D G3DSA:1.10.760.10 165 281 3.4E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0536 bb32ea28cbfdaf2ac7de199876236d60 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 185 8.3E-43 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Tbd_0536 bb32ea28cbfdaf2ac7de199876236d60 190 Gene3D G3DSA:2.60.450.10 61 190 4.3E-6 T 11-10-2018 Tbd_0536 bb32ea28cbfdaf2ac7de199876236d60 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 185 1.0E-37 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Tbd_2581 a63201fa96255509a3b4afca66a43774 164 Gene3D G3DSA:3.40.50.2020 4 159 9.4E-44 T 11-10-2018 Tbd_2581 a63201fa96255509a3b4afca66a43774 164 SUPERFAMILY SSF53271 10 142 3.8E-36 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_2581 a63201fa96255509a3b4afca66a43774 164 Pfam PF00156 Phosphoribosyl transferase domain 8 135 3.9E-19 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_0725 4610ecd3e99cc00340f866ab65f92b00 60 Pfam PF10636 Hemin uptake protein hemP 24 60 6.2E-19 T 11-10-2018 IPR019600 Hemin uptake protein HemP Tbd_0725 4610ecd3e99cc00340f866ab65f92b00 60 Gene3D G3DSA:2.10.70.10 22 60 1.8E-16 T 11-10-2018 Tbd_2173 9891a57ae7314e9b40e921dccefb7504 85 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 73 3.6E-19 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 Tbd_2173 9891a57ae7314e9b40e921dccefb7504 85 SUPERFAMILY SSF64307 7 73 1.07E-11 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_1097 3110aa3460f6f1f48c467a11f2e77cda 249 Pfam PF01311 Bacterial export proteins, family 1 10 236 6.3E-33 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1097 3110aa3460f6f1f48c467a11f2e77cda 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 172 194 3.5E-8 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1097 3110aa3460f6f1f48c467a11f2e77cda 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 73 92 3.5E-8 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1097 3110aa3460f6f1f48c467a11f2e77cda 249 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 194 213 3.5E-8 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 393 53.115 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 Pfam PF00266 Aminotransferase class-V 4 366 4.5E-87 T 11-10-2018 IPR000192 Aminotransferase class V domain Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 PIRSF PIRSF005572 1 382 3.0E-133 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 Gene3D G3DSA:3.90.1150.10 4 373 6.0E-162 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 3 402 1.4E-222 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 Gene3D G3DSA:3.40.640.10 15 260 6.0E-162 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_1164 b89a21259fc54169c79923cd9c49f286 402 SUPERFAMILY SSF53383 2 388 3.72E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 39 273 1.1E-38 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 Pfam PF01514 Secretory protein of YscJ/FliF family 28 216 2.5E-52 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 Gene3D G3DSA:3.30.300.30 119 214 2.3E-10 T 11-10-2018 Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 PRINTS PR01009 Flagellar M-ring protein signature 193 211 5.6E-15 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 PRINTS PR01009 Flagellar M-ring protein signature 118 136 5.6E-15 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 PRINTS PR01009 Flagellar M-ring protein signature 150 164 5.6E-15 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tbd_1088 c67f83be6de9d89e1191e8e2e4b936e8 381 Pfam PF08345 Flagellar M-ring protein C-terminal 284 343 2.6E-6 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal Tbd_1562 769f7b6c804f4d8a1d2973d8fc006cf0 218 SUPERFAMILY SSF56784 3 215 4.14E-56 T 11-10-2018 IPR036412 HAD-like superfamily Tbd_1562 769f7b6c804f4d8a1d2973d8fc006cf0 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 179 1.2E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tbd_1562 769f7b6c804f4d8a1d2973d8fc006cf0 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 185 2.8E-29 T 11-10-2018 Tbd_1562 769f7b6c804f4d8a1d2973d8fc006cf0 218 Gene3D G3DSA:3.40.50.1000 8 207 4.1E-51 T 11-10-2018 IPR023214 HAD superfamily Tbd_1562 769f7b6c804f4d8a1d2973d8fc006cf0 218 Gene3D G3DSA:1.10.150.240 20 85 4.1E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 Gene3D G3DSA:3.40.30.10 5 263 6.9E-114 T 11-10-2018 Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 Pfam PF13410 Glutathione S-transferase, C-terminal domain 125 195 2.1E-6 T 11-10-2018 Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 Gene3D G3DSA:1.20.1050.10 83 219 6.9E-114 T 11-10-2018 Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 SUPERFAMILY SSF47616 89 206 1.6E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 SUPERFAMILY SSF52833 4 102 3.86E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_1050 d21bb8f2a9ac6764f10739a7ca933f16 263 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 1.6E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Tbd_1173 101123b2f0820087506c607cfef238ad 592 Gene3D G3DSA:2.60.40.10 2 96 5.4E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold Tbd_1173 101123b2f0820087506c607cfef238ad 592 SUPERFAMILY SSF51445 87 509 1.45E-114 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Tbd_1173 101123b2f0820087506c607cfef238ad 592 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 2 65 5.2E-5 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Tbd_1173 101123b2f0820087506c607cfef238ad 592 Pfam PF00128 Alpha amylase, catalytic domain 122 222 9.5E-21 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1173 101123b2f0820087506c607cfef238ad 592 Gene3D G3DSA:1.10.10.760 439 483 7.7E-181 T 11-10-2018 Tbd_1173 101123b2f0820087506c607cfef238ad 592 Pfam PF11941 Domain of unknown function (DUF3459) 499 584 5.7E-14 T 11-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Tbd_1173 101123b2f0820087506c607cfef238ad 592 PIRSF PIRSF006337 1 579 1.1E-225 T 11-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Tbd_1173 101123b2f0820087506c607cfef238ad 592 SUPERFAMILY SSF81296 3 91 1.07E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set Tbd_1173 101123b2f0820087506c607cfef238ad 592 SMART SM00642 112 453 2.2E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tbd_1173 101123b2f0820087506c607cfef238ad 592 Gene3D G3DSA:3.20.20.80 100 507 7.7E-181 T 11-10-2018 Tbd_1173 101123b2f0820087506c607cfef238ad 592 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 12 553 6.4E-216 T 11-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Tbd_0880 185d53b239983f25896d6472a5963582 296 Pfam PF00348 Polyprenyl synthetase 32 262 1.5E-53 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tbd_0880 185d53b239983f25896d6472a5963582 296 SUPERFAMILY SSF48576 4 289 1.44E-83 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_0880 185d53b239983f25896d6472a5963582 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tbd_0880 185d53b239983f25896d6472a5963582 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tbd_0880 185d53b239983f25896d6472a5963582 296 Gene3D G3DSA:1.10.600.10 2 296 9.3E-94 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tbd_1315 f252530ac726628cb955c1f07237d8a1 659 Gene3D G3DSA:3.30.420.10 227 459 2.8E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_1964 0a7af9951c25677c4dcff340bf5f196a 180 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 154 178 0.0033 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1655 b65cfed1bafcb8af4ab7b4a605aa64b0 125 PIRSF PIRSF029720 1 125 1.6E-48 T 11-10-2018 IPR014558 Uncharacterised conserved lipoprotein Tbd_1655 b65cfed1bafcb8af4ab7b4a605aa64b0 125 Pfam PF03640 Secreted repeat of unknown function 28 68 3.4E-14 T 11-10-2018 IPR005297 Lipoprotein repeat Tbd_1655 b65cfed1bafcb8af4ab7b4a605aa64b0 125 Pfam PF03640 Secreted repeat of unknown function 82 124 2.8E-21 T 11-10-2018 IPR005297 Lipoprotein repeat Tbd_0304 2a680f67a374a554aa77b25ac2ef3963 253 Gene3D G3DSA:1.25.40.10 72 231 5.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0304 2a680f67a374a554aa77b25ac2ef3963 253 SMART SM00028 145 178 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0304 2a680f67a374a554aa77b25ac2ef3963 253 SMART SM00028 111 144 0.74 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tbd_0304 2a680f67a374a554aa77b25ac2ef3963 253 SUPERFAMILY SSF48452 108 184 2.05E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 Pfam PF05860 haemagglutination activity domain 95 193 1.0E-15 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 Pfam PF13018 Extended Signal Peptide of Type V secretion system 15 39 4.9E-5 T 11-10-2018 IPR024973 ESPR domain Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 SUPERFAMILY SSF51126 90 435 4.71E-35 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 SUPERFAMILY SSF51126 767 926 1.66E-6 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 SMART SM00912 67 194 8.8E-19 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3305 3413 4.1E-38 T 11-10-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 Gene3D G3DSA:2.160.20.10 688 976 1.2E-5 T 11-10-2018 IPR012334 Pectin lyase fold Tbd_0355 a0c091256509346d0e7a9ec1189d763d 3472 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 104 190 1.9E-14 T 11-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 Pfam PF02049 Flagellar hook-basal body complex protein FliE 31 114 5.1E-30 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 33 113 9.8E-24 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 9 114 18.247 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 99 112 4.1E-16 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 43 59 4.1E-16 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_1599 6a97899a71a60753ee3402a943caa5ac 114 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 78 94 4.1E-16 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tbd_2827 3fd9f7bc8e4444664d5ade71cab3cc12 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.3E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2827 3fd9f7bc8e4444664d5ade71cab3cc12 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2827 3fd9f7bc8e4444664d5ade71cab3cc12 44 Pfam PF00468 Ribosomal protein L34 1 44 3.1E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2827 3fd9f7bc8e4444664d5ade71cab3cc12 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.142 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_2827 3fd9f7bc8e4444664d5ade71cab3cc12 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tbd_1223 4317950ea7bd78b7591d3566acdf2964 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 123 2.9E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Tbd_1223 4317950ea7bd78b7591d3566acdf2964 127 SUPERFAMILY SSF54593 4 126 6.19E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_1223 4317950ea7bd78b7591d3566acdf2964 127 Gene3D G3DSA:3.10.180.10 11 126 1.2E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 SUPERFAMILY SSF51735 9 236 8.34E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 80 237 3.2E-23 T 11-10-2018 Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 Gene3D G3DSA:3.40.50.720 4 241 1.9E-36 T 11-10-2018 Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.7E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.7E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.7E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1886 bb2a7aaea7a079d165f440f17380a0ba 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 3.7E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tbd_1102 a44d0f72cf77fe4da6f28622fa03916b 114 Pfam PF11743 Protein of unknown function (DUF3301) 5 98 2.1E-32 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 Tbd_0494 1a4c7576cfef6700fa911aa42b7b7ec8 163 PIRSF PIRSF019239 1 163 5.4E-44 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tbd_0494 1a4c7576cfef6700fa911aa42b7b7ec8 163 Pfam PF01899 Na+/H+ ion antiporter subunit 12 159 9.8E-42 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Tbd_0340 a854f133b9a85efbb191cd7ba514a0c4 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 17 53 1.5E-9 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Tbd_2298 934d8dc18098c04130e0cd3c1ad72a4f 271 SUPERFAMILY SSF161098 69 258 1.1E-33 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2298 934d8dc18098c04130e0cd3c1ad72a4f 271 Gene3D G3DSA:1.10.3720.10 64 265 1.2E-30 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2298 934d8dc18098c04130e0cd3c1ad72a4f 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 265 1.5E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_2298 934d8dc18098c04130e0cd3c1ad72a4f 271 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 266 2.5E-88 T 11-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Tbd_2275 edb23c72e124b0cd443784de0abffcba 902 SUPERFAMILY SSF52540 61 420 2.51E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2275 edb23c72e124b0cd443784de0abffcba 902 SUPERFAMILY SSF52540 59 263 2.23E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2275 edb23c72e124b0cd443784de0abffcba 902 Pfam PF04851 Type III restriction enzyme, res subunit 1 251 8.1E-14 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tbd_2342 a0e741d3f25ddf7d49bf946cba50a362 198 Pfam PF13875 Domain of unknown function (DUF4202) 9 191 1.3E-68 T 11-10-2018 IPR025255 Protein of unknown function DUF4202 Tbd_0332 21c99372eec150eccc50891977de3229 238 Pfam PF02104 SURF1 family 18 218 1.2E-36 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1123 adcecc1380a03f42c00896322ff00658 148 SUPERFAMILY SSF46785 7 132 1.75E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_1123 adcecc1380a03f42c00896322ff00658 148 Gene3D G3DSA:1.10.10.10 1 83 2.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_1123 adcecc1380a03f42c00896322ff00658 148 Gene3D G3DSA:3.30.1490.190 85 142 4.3E-21 T 11-10-2018 Tbd_1123 adcecc1380a03f42c00896322ff00658 148 Pfam PF01475 Ferric uptake regulator family 11 129 5.1E-47 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Tbd_1064 2e132dc043c4725046e9d0c7e996ba90 268 SUPERFAMILY SSF53213 5 257 3.66E-86 T 11-10-2018 Tbd_1064 2e132dc043c4725046e9d0c7e996ba90 268 Gene3D G3DSA:3.40.830.10 1 257 1.1E-86 T 11-10-2018 Tbd_1064 2e132dc043c4725046e9d0c7e996ba90 268 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 257 6.0E-41 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Tbd_1064 2e132dc043c4725046e9d0c7e996ba90 268 PIRSF PIRSF006157 1 258 3.4E-81 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 Tbd_0485 705b7bb60b25befca9364537f1f3a19c 177 SUPERFAMILY SSF69118 1 176 2.43E-36 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tbd_0485 705b7bb60b25befca9364537f1f3a19c 177 Gene3D G3DSA:1.20.1290.10 14 177 3.3E-24 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tbd_0485 705b7bb60b25befca9364537f1f3a19c 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 104 6.6E-6 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tbd_1256 1c4aaf240699fed7cd320a7621a203b8 274 Hamap MF_01805 Segregation and condensation protein A [scpA]. 40 270 20.934 T 11-10-2018 IPR003768 Segregation and condensation protein A Tbd_1256 1c4aaf240699fed7cd320a7621a203b8 274 Pfam PF02616 Segregation and condensation protein ScpA 57 268 1.6E-30 T 11-10-2018 IPR003768 Segregation and condensation protein A Tbd_0279 62f5de8afe3fe4d75cabde996ee14322 105 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 4 91 4.8E-7 T 11-10-2018 Tbd_0279 62f5de8afe3fe4d75cabde996ee14322 105 Gene3D G3DSA:3.40.30.10 6 105 1.4E-32 T 11-10-2018 Tbd_0279 62f5de8afe3fe4d75cabde996ee14322 105 SUPERFAMILY SSF52833 6 104 2.12E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2518 adf6de8172d0db115204f045680eeb8d 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 1.3E-30 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 Gene3D G3DSA:3.40.50.300 25 189 3.3E-35 T 11-10-2018 Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 254 26.49 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 1 245 6.1E-56 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 SUPERFAMILY SSF52540 37 240 2.51E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 Gene3D G3DSA:1.10.40.50 190 257 2.6E-20 T 11-10-2018 Tbd_1842 874705e58ee8f50593dd0289acd692b1 257 Pfam PF03193 RsgA GTPase 22 189 4.7E-43 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Tbd_1244 0013622544b75a38daa9c5f8c25d8e40 319 Gene3D G3DSA:3.30.1330.60 118 302 5.8E-58 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_1244 0013622544b75a38daa9c5f8c25d8e40 319 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 64 5.7E-18 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain Tbd_1244 0013622544b75a38daa9c5f8c25d8e40 319 Pfam PF00691 OmpA family 170 261 2.6E-13 T 11-10-2018 IPR006665 OmpA-like domain Tbd_1244 0013622544b75a38daa9c5f8c25d8e40 319 SUPERFAMILY SSF103088 167 274 1.44E-18 T 11-10-2018 IPR036737 OmpA-like domain superfamily Tbd_2185 d7bfbbc265cb5fd39fcb0220f43495af 297 Pfam PF01136 Peptidase family U32 83 262 3.0E-18 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 Gene3D G3DSA:3.40.50.10490 95 289 1.6E-224 T 11-10-2018 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 Pfam PF00342 Phosphoglucose isomerase 49 539 9.2E-217 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 1.2E-54 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 Gene3D G3DSA:3.40.50.10490 10 504 1.6E-224 T 11-10-2018 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 SUPERFAMILY SSF53697 4 546 4.7E-209 T 11-10-2018 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 40.287 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 Gene3D G3DSA:1.10.1390.10 505 546 1.8E-16 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_0974 e4d77473b83ac1ac58cd11c249e8300b 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tbd_1529 a556c37db3cadadff12c8a235b45d6d2 210 Pfam PF04279 Intracellular septation protein A 3 201 4.1E-69 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Tbd_1529 a556c37db3cadadff12c8a235b45d6d2 210 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 2 202 18.413 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Tbd_0457 fec4622d37f1ebf3108be17e45fc1e2c 372 Gene3D G3DSA:3.30.420.40 148 332 2.4E-123 T 11-10-2018 Tbd_0457 fec4622d37f1ebf3108be17e45fc1e2c 372 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 12 372 5.9E-141 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Tbd_0457 fec4622d37f1ebf3108be17e45fc1e2c 372 Gene3D G3DSA:3.30.420.40 17 367 2.4E-123 T 11-10-2018 Tbd_0457 fec4622d37f1ebf3108be17e45fc1e2c 372 SUPERFAMILY SSF53067 12 346 1.12E-20 T 11-10-2018 Tbd_0457 fec4622d37f1ebf3108be17e45fc1e2c 372 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 372 41.656 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Tbd_1974 333198a3b8545cc50750670bcf1f437f 84 Gene3D G3DSA:3.30.920.30 20 84 1.1E-5 T 11-10-2018 IPR038570 HicA superfamily Tbd_1974 333198a3b8545cc50750670bcf1f437f 84 SUPERFAMILY SSF54786 21 72 5.1E-7 T 11-10-2018 Tbd_1974 333198a3b8545cc50750670bcf1f437f 84 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 71 6.8E-7 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Tbd_1154 572da2c995f858f0f0b600120e421392 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 6.7E-47 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 6.7E-47 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 6.7E-47 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 6.7E-47 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 6.7E-47 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 Pfam PF00361 Proton-conducting membrane transporter 134 419 4.1E-81 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 62 125 7.9E-6 T 11-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1154 572da2c995f858f0f0b600120e421392 494 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 3.1E-188 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 Pfam PF13187 4Fe-4S dicluster domain 9 68 1.8E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 128 6.7E-59 T 11-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 Gene3D G3DSA:3.30.70.20 2 73 4.0E-27 T 11-10-2018 Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 Gene3D G3DSA:3.30.720.40 74 145 2.2E-25 T 11-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 SUPERFAMILY SSF54862 3 120 8.69E-22 T 11-10-2018 Tbd_0873 9cbf81a18e0fffafe5e5be1025356cc3 161 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 71 140 2.4E-26 T 11-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Tbd_0356 428f02751726342955725786575584ce 655 SUPERFAMILY SSF55816 435 649 2.35E-40 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 504 527 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 587 606 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 304 321 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 370 390 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 106 124 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 PRINTS PR01607 Apyrase family signature 339 362 1.0E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 Gene3D G3DSA:3.60.21.10 99 420 2.8E-66 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Tbd_0356 428f02751726342955725786575584ce 655 Gene3D G3DSA:3.90.780.10 442 651 3.2E-47 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 Pfam PF00149 Calcineurin-like phosphoesterase 109 356 5.0E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tbd_0356 428f02751726342955725786575584ce 655 Pfam PF02872 5'-nucleotidase, C-terminal domain 443 613 8.4E-31 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tbd_0356 428f02751726342955725786575584ce 655 SUPERFAMILY SSF56300 108 427 1.26E-65 T 11-10-2018 Tbd_1701 42d3d2d850640200486685e796756bd8 400 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Tbd_1701 42d3d2d850640200486685e796756bd8 400 SUPERFAMILY SSF111352 6 374 1.96E-91 T 11-10-2018 Tbd_1701 42d3d2d850640200486685e796756bd8 400 Gene3D G3DSA:1.10.3430.10 1 399 3.1E-95 T 11-10-2018 IPR029020 Ammonium/urea transporter Tbd_1701 42d3d2d850640200486685e796756bd8 400 Pfam PF00909 Ammonium Transporter Family 12 392 9.1E-83 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Tbd_1263 d3a84c1094ab7d6dd4dc51da9b02ed8b 433 Pfam PF00374 Nickel-dependent hydrogenase 262 424 2.5E-10 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tbd_1263 d3a84c1094ab7d6dd4dc51da9b02ed8b 433 Pfam PF00374 Nickel-dependent hydrogenase 45 130 3.1E-12 T 11-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tbd_1263 d3a84c1094ab7d6dd4dc51da9b02ed8b 433 SUPERFAMILY SSF56762 3 424 1.57E-96 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1263 d3a84c1094ab7d6dd4dc51da9b02ed8b 433 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 415 424 - T 11-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tbd_1263 d3a84c1094ab7d6dd4dc51da9b02ed8b 433 Gene3D G3DSA:1.10.645.10 7 424 7.9E-106 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_0716 f11117f308d906235a0adbe92b9ed723 253 Gene3D G3DSA:3.20.20.60 1 253 2.1E-83 T 11-10-2018 Tbd_0716 f11117f308d906235a0adbe92b9ed723 253 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 26 212 2.1E-31 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Tbd_0716 f11117f308d906235a0adbe92b9ed723 253 SUPERFAMILY SSF51621 1 253 6.63E-74 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tbd_2390 76fc71aec3f7952c8eb8cf7722903908 251 SUPERFAMILY SSF69572 5 250 2.62E-80 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tbd_2390 76fc71aec3f7952c8eb8cf7722903908 251 Gene3D G3DSA:3.40.50.720 3 251 6.3E-89 T 11-10-2018 Tbd_2390 76fc71aec3f7952c8eb8cf7722903908 251 Pfam PF00899 ThiF family 11 245 2.2E-61 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 1.8E-8 T 11-10-2018 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 PRINTS PR00942 Copper-transporting ATPase 1 signature 64 75 1.8E-8 T 11-10-2018 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 1.8E-8 T 11-10-2018 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 Pfam PF00403 Heavy-metal-associated domain 12 71 7.2E-16 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 Gene3D G3DSA:3.30.70.100 3 75 3.8E-22 T 11-10-2018 Tbd_1659 a0b3df100214aaa55b5659b2a32f58c6 75 SUPERFAMILY SSF55008 4 73 2.23E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 Pfam PF00557 Metallopeptidase family M24 180 411 7.8E-64 T 11-10-2018 IPR000994 Peptidase M24 Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 121 5.3E-34 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 Gene3D G3DSA:3.90.230.10 171 433 9.8E-99 T 11-10-2018 Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 Gene3D G3DSA:3.40.350.10 5 170 8.5E-48 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 SMART SM01011 3 135 5.7E-60 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 SUPERFAMILY SSF53092 4 173 1.1E-47 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 SUPERFAMILY SSF55920 174 431 1.44E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Tbd_2334 3a98040075270613d76156f5d9dea9cd 433 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 347 359 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Tbd_1500 5642b6ebc9e931a37e39685556899c86 679 PIRSF PIRSF001265 1 679 2.6E-262 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_1500 5642b6ebc9e931a37e39685556899c86 679 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 7 678 4.5E-268 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_1500 5642b6ebc9e931a37e39685556899c86 679 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 679 25.674 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_1500 5642b6ebc9e931a37e39685556899c86 679 Pfam PF03030 Inorganic H+ pyrophosphatase 14 674 3.9E-268 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 2.6E-70 T 11-10-2018 Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 248 6.8E-17 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 3.7E-78 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 Gene3D G3DSA:3.60.10.10 1 258 4.3E-82 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 SUPERFAMILY SSF56219 1 256 1.96E-73 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tbd_0254 60404aac85a008066cccb5154d9bd31c 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Tbd_1335 84468aebd7773142aa675683f13d6c6d 429 Pfam PF02321 Outer membrane efflux protein 38 223 1.7E-7 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1335 84468aebd7773142aa675683f13d6c6d 429 Pfam PF02321 Outer membrane efflux protein 245 418 5.8E-13 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1335 84468aebd7773142aa675683f13d6c6d 429 SUPERFAMILY SSF56954 15 419 1.31E-48 T 11-10-2018 Tbd_1335 84468aebd7773142aa675683f13d6c6d 429 Gene3D G3DSA:1.20.1600.10 30 421 1.3E-38 T 11-10-2018 Tbd_0776 8d9e54ca73e679810e62b778537e7f37 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 33 172 8.9E-27 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tbd_0776 8d9e54ca73e679810e62b778537e7f37 183 SMART SM00644 23 171 1.1E-40 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tbd_0776 8d9e54ca73e679810e62b778537e7f37 183 Gene3D G3DSA:3.40.80.10 11 183 1.0E-55 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tbd_0776 8d9e54ca73e679810e62b778537e7f37 183 SUPERFAMILY SSF55846 11 179 2.62E-62 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tbd_2488 1971c79c0091345c9a3cc87934d815ba 110 Pfam PF04358 DsrC like protein 5 105 1.2E-28 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2488 1971c79c0091345c9a3cc87934d815ba 110 SUPERFAMILY SSF69721 2 106 3.27E-28 T 11-10-2018 IPR025526 DsrC-like domain superfamily Tbd_2488 1971c79c0091345c9a3cc87934d815ba 110 PIRSF PIRSF006223 3 108 1.2E-35 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2488 1971c79c0091345c9a3cc87934d815ba 110 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 105 3.0E-22 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Tbd_2488 1971c79c0091345c9a3cc87934d815ba 110 Gene3D G3DSA:1.10.10.370 39 106 4.7E-21 T 11-10-2018 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 8.8E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 8.8E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 8.8E-19 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 TIGRFAM TIGR00077 lspA: signal peptidase II 7 148 6.6E-40 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 153 16.636 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_1858 e46b65d82e114d5068e79d8a7498ad3b 157 Pfam PF01252 Signal peptidase (SPase) II 8 147 2.7E-40 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 Gene3D G3DSA:3.30.413.10 291 407 2.7E-37 T 11-10-2018 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 PIRSF PIRSF004640 1 407 2.5E-135 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 SUPERFAMILY SSF56014 295 404 1.18E-7 T 11-10-2018 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 399 30.925 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 396 1.2E-124 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 Gene3D G3DSA:3.20.20.20 3 290 2.0E-102 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_0594 3e65b6de6bc9fc548a6e9e0237d9c28b 407 Pfam PF04551 GcpE protein 10 397 2.5E-118 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tbd_0996 706cc7a1eab4d7f1a974e162ff1eec32 284 Gene3D G3DSA:3.40.50.1820 26 278 1.0E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0996 706cc7a1eab4d7f1a974e162ff1eec32 284 Pfam PF12697 Alpha/beta hydrolase family 46 260 6.4E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tbd_0996 706cc7a1eab4d7f1a974e162ff1eec32 284 SUPERFAMILY SSF53474 39 278 1.99E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_1707 69c0328d89a6c09cae2a79b3aa89f5d4 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.641 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tbd_1707 69c0328d89a6c09cae2a79b3aa89f5d4 133 Gene3D G3DSA:3.10.20.400 3 95 1.7E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tbd_1707 69c0328d89a6c09cae2a79b3aa89f5d4 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 9.9E-35 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tbd_1707 69c0328d89a6c09cae2a79b3aa89f5d4 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 107 1.0E-26 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tbd_1707 69c0328d89a6c09cae2a79b3aa89f5d4 133 SUPERFAMILY SSF141734 4 111 3.53E-48 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tbd_2677 a13a7faf4e4d3c6c8237e106b490195d 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 60 1.2E-18 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Tbd_1794 2264f44b33ebf53e4b10b0a83417ac09 461 Pfam PF13807 G-rich domain on putative tyrosine kinase 343 414 3.0E-12 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain Tbd_1794 2264f44b33ebf53e4b10b0a83417ac09 461 TIGRFAM TIGR03017 EpsF: chain length determinant protein EpsF 1 440 1.8E-221 T 11-10-2018 IPR017468 Chain length determinant protein EpsF Tbd_1794 2264f44b33ebf53e4b10b0a83417ac09 461 Pfam PF02706 Chain length determinant protein 2 88 5.7E-13 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Tbd_1561 c1b527e3be32f904f02e7dbd5c2c3710 116 Gene3D G3DSA:2.102.10.10 6 116 3.6E-10 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_1561 c1b527e3be32f904f02e7dbd5c2c3710 116 Pfam PF00355 Rieske [2Fe-2S] domain 8 93 3.8E-8 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Tbd_1561 c1b527e3be32f904f02e7dbd5c2c3710 116 SUPERFAMILY SSF50022 6 112 9.69E-20 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Tbd_0382 0889b8c6a63fc0bc77a9b16b6b489e28 652 Pfam PF00350 Dynamin family 59 275 1.4E-13 T 11-10-2018 IPR022812 Dynamin superfamily Tbd_0382 0889b8c6a63fc0bc77a9b16b6b489e28 652 SUPERFAMILY SSF52540 44 347 1.17E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1909 81e44074a60adafbeb46a35eb705d624 163 Pfam PF02674 Colicin V production protein 4 145 1.4E-30 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Tbd_1422 7b0308882b297d6e4e4a4781f0ff1542 261 Pfam PF00563 EAL domain 5 235 3.9E-27 T 11-10-2018 IPR001633 EAL domain Tbd_1422 7b0308882b297d6e4e4a4781f0ff1542 261 SMART SM00052 1 241 6.9E-7 T 11-10-2018 IPR001633 EAL domain Tbd_1422 7b0308882b297d6e4e4a4781f0ff1542 261 SUPERFAMILY SSF141868 4 240 7.85E-28 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_1422 7b0308882b297d6e4e4a4781f0ff1542 261 Gene3D G3DSA:3.20.20.450 1 241 5.9E-31 T 11-10-2018 IPR035919 EAL domain superfamily Tbd_2254 8ff722e15e00a29cf4629163463b0a85 632 Pfam PF05170 AsmA family 4 524 2.9E-60 T 11-10-2018 IPR007844 AsmA Tbd_0334 71b4b967e05fdcc62c6cafdc1f110c86 327 Pfam PF02628 Cytochrome oxidase assembly protein 6 318 8.6E-89 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Tbd_0729 7beb1d2342017380782f1a65b2393e59 293 SUPERFAMILY SSF102114 37 210 8.76E-10 T 11-10-2018 Tbd_0729 7beb1d2342017380782f1a65b2393e59 293 Gene3D G3DSA:3.20.20.70 35 230 9.3E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2180 dfdb0382e1a637dafd8ac854704368c0 381 SUPERFAMILY SSF56935 24 381 2.01E-57 T 11-10-2018 Tbd_2180 dfdb0382e1a637dafd8ac854704368c0 381 Gene3D G3DSA:2.40.160.60 23 381 2.9E-74 T 11-10-2018 Tbd_2180 dfdb0382e1a637dafd8ac854704368c0 381 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 181 378 1.8E-18 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Tbd_1792 3229fc5026969508190d5591d6d259a3 298 TIGRFAM TIGR03113 exosortase_2: exosortase B 20 288 1.3E-136 T 11-10-2018 IPR017544 Exosortase 2 Tbd_1792 3229fc5026969508190d5591d6d259a3 298 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 190 280 9.2E-21 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain Tbd_1792 3229fc5026969508190d5591d6d259a3 298 TIGRFAM TIGR02602 8TM_EpsH: exosortase 42 283 2.8E-44 T 11-10-2018 IPR013426 Exosortase, EpsH-like Tbd_1792 3229fc5026969508190d5591d6d259a3 298 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 25 282 9.1E-63 T 11-10-2018 IPR019127 Exosortase Tbd_2002 3647dfe982abdb55af76c9e4bb63d0ba 337 Pfam PF01076 Plasmid recombination enzyme 3 176 4.3E-16 T 11-10-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 Tbd_2002 3647dfe982abdb55af76c9e4bb63d0ba 337 Gene3D G3DSA:3.30.930.30 7 181 1.4E-23 T 11-10-2018 Tbd_0118 c1613bedc9eeb5a9bdca1c359dd6baee 385 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 15 375 2.1E-126 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0118 c1613bedc9eeb5a9bdca1c359dd6baee 385 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 13 384 39.978 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_0118 c1613bedc9eeb5a9bdca1c359dd6baee 385 Pfam PF01098 Cell cycle protein 18 377 2.2E-104 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tbd_1313 5cd86ec6e31dc9ae33cd926eabdce53b 211 Gene3D G3DSA:1.20.1260.10 46 191 7.1E-37 T 11-10-2018 IPR012347 Ferritin-like Tbd_1313 5cd86ec6e31dc9ae33cd926eabdce53b 211 Pfam PF03713 Domain of unknown function (DUF305) 50 185 1.6E-35 T 11-10-2018 IPR005183 Domain of unknown function DUF305 Tbd_2020 403c4e8e19a187c294577d7c36901a6d 225 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 210 1.8E-76 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Tbd_2020 403c4e8e19a187c294577d7c36901a6d 225 PIRSF PIRSF006102 3 221 4.4E-69 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Tbd_2020 403c4e8e19a187c294577d7c36901a6d 225 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 203 6.1E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Tbd_2020 403c4e8e19a187c294577d7c36901a6d 225 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 213 25.714 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Tbd_1250 e81e182203813ec6fffd0727b02e6078 245 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 219 1.6E-22 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_0848 ec362f59d43488ff54c0cb5642a7cf18 362 SUPERFAMILY SSF74653 198 279 5.1E-11 T 11-10-2018 Tbd_0848 ec362f59d43488ff54c0cb5642a7cf18 362 Gene3D G3DSA:3.30.1150.10 155 279 1.3E-6 T 11-10-2018 Tbd_0708 b73dc99df0cd9f33d65c46288ebf407d 287 Pfam PF02424 ApbE family 11 246 5.4E-37 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Tbd_0708 b73dc99df0cd9f33d65c46288ebf407d 287 Gene3D G3DSA:3.10.520.20 2 277 7.0E-46 T 11-10-2018 Tbd_0708 b73dc99df0cd9f33d65c46288ebf407d 287 SUPERFAMILY SSF143631 4 259 1.02E-53 T 11-10-2018 IPR003374 ApbE-like superfamily Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 Gene3D G3DSA:1.20.810.10 1 410 3.5E-159 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 280 386 1.3E-41 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 SUPERFAMILY SSF81648 283 401 1.24E-30 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 SUPERFAMILY SSF81342 9 282 5.02E-100 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 PIRSF PIRSF038885 1 410 9.9E-163 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Tbd_1832 c84f694706777d70d6245da1303ad9ed 410 Pfam PF00033 Cytochrome b/b6/petB 26 214 1.9E-70 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Tbd_2172 0cce486d11f368cb1dac5dfaa72c51e8 146 Gene3D G3DSA:1.20.120.520 4 143 1.1E-24 T 11-10-2018 Tbd_2172 0cce486d11f368cb1dac5dfaa72c51e8 146 Pfam PF01814 Hemerythrin HHE cation binding domain 4 125 2.6E-22 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Tbd_0042 d041244df3690010d65b8463623948f7 186 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 5 185 2.1E-63 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tbd_0042 d041244df3690010d65b8463623948f7 186 Pfam PF12804 MobA-like NTP transferase domain 6 158 2.6E-33 T 11-10-2018 IPR025877 MobA-like NTP transferase Tbd_0042 d041244df3690010d65b8463623948f7 186 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 2 186 23.937 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tbd_0042 d041244df3690010d65b8463623948f7 186 Gene3D G3DSA:3.90.550.10 1 186 1.2E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0042 d041244df3690010d65b8463623948f7 186 SUPERFAMILY SSF53448 4 184 4.02E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0923 284e0cab7c573bc5160266ec12ef5e07 583 Gene3D G3DSA:1.50.10.10 210 577 7.2E-73 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tbd_0923 284e0cab7c573bc5160266ec12ef5e07 583 SUPERFAMILY SSF48208 183 572 3.18E-73 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tbd_0923 284e0cab7c573bc5160266ec12ef5e07 583 Pfam PF00723 Glycosyl hydrolases family 15 214 476 8.5E-25 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Tbd_0938 a8e3c5ec7ba9656c5cb3574039d495e2 307 SUPERFAMILY SSF56349 33 302 1.32E-11 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_0938 a8e3c5ec7ba9656c5cb3574039d495e2 307 Pfam PF12835 Integrase 122 257 5.3E-13 T 11-10-2018 IPR024456 Integrase catalytic domain, putative Tbd_0938 a8e3c5ec7ba9656c5cb3574039d495e2 307 Gene3D G3DSA:1.10.443.10 123 306 1.6E-7 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_0818 02036644f23f27b983ec90aa652abffe 128 Pfam PF06532 Protein of unknown function (DUF1109) 11 71 1.1E-13 T 11-10-2018 IPR009495 Anti-sigma-F factor NrsF Tbd_0818 02036644f23f27b983ec90aa652abffe 128 Pfam PF06532 Protein of unknown function (DUF1109) 94 128 8.0E-10 T 11-10-2018 IPR009495 Anti-sigma-F factor NrsF Tbd_0681 6e2bfab38acc2be5f7e18917f6b9c329 185 ProDom PD105539 COIL PRECURSOR AQ_678 COILED SIGNAL 15 182 3.0E-66 T 11-10-2018 Tbd_2540 323d7e1dd0d94b3a2aa24c3329802e45 370 Gene3D G3DSA:3.30.750.24 279 370 1.3E-8 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2540 323d7e1dd0d94b3a2aa24c3329802e45 370 Pfam PF13466 STAS domain 281 359 1.7E-14 T 11-10-2018 IPR002645 STAS domain Tbd_2540 323d7e1dd0d94b3a2aa24c3329802e45 370 SUPERFAMILY SSF52091 281 363 6.47E-9 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_2476 ae62164013213dc8c51f7f1ee7dadd34 167 SUPERFAMILY SSF48695 33 125 4.34E-15 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Tbd_2260 33d2fe976c0f8469791fa922972d153f 266 Pfam PF06884 Protein of unknown function (DUF1264) 53 222 2.4E-62 T 11-10-2018 IPR010686 Oil body-associated protein-like Tbd_1670 0a96477a1ddbe18ac46d5efc79780310 325 SUPERFAMILY SSF161098 109 306 5.63E-11 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1670 0a96477a1ddbe18ac46d5efc79780310 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 323 6.1E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_1670 0a96477a1ddbe18ac46d5efc79780310 325 Gene3D G3DSA:1.10.3720.10 106 319 6.6E-15 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2498 289c87875ed22cf9c1af987219290658 363 Pfam PF14907 Uncharacterised nucleotidyltransferase 25 277 1.7E-52 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase Tbd_0862 454c4980618cdb113cbeda384c6676a4 83 Pfam PF09360 Iron-binding zinc finger CDGSH type 52 75 1.8E-9 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Tbd_0862 454c4980618cdb113cbeda384c6676a4 83 Pfam PF09360 Iron-binding zinc finger CDGSH type 8 39 3.5E-10 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Tbd_0862 454c4980618cdb113cbeda384c6676a4 83 SMART SM00704 9 45 1.5E-9 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Tbd_0862 454c4980618cdb113cbeda384c6676a4 83 SMART SM00704 46 81 4.1E-5 T 11-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Tbd_0862 454c4980618cdb113cbeda384c6676a4 83 Gene3D G3DSA:3.40.5.90 1 78 2.4E-34 T 11-10-2018 Tbd_2711 e16d63835e7489fee9e5e6f5411cbc08 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 13 192 3.8E-39 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_2711 e16d63835e7489fee9e5e6f5411cbc08 202 Gene3D G3DSA:3.40.50.1240 10 188 4.5E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_2711 e16d63835e7489fee9e5e6f5411cbc08 202 SMART SM00855 10 160 4.6E-12 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tbd_2711 e16d63835e7489fee9e5e6f5411cbc08 202 SUPERFAMILY SSF53254 11 190 5.35E-39 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Tbd_2087 d6166766a6ecb99ef59ff2ae6336f61c 131 Pfam PF16137 Domain of unknown function (DUF4845) 34 118 4.5E-27 T 11-10-2018 IPR032314 Protein of unknown function DUF4845 Tbd_0971 51d5cb63c31a0d2ebef83c5168d7aec8 267 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 57 266 1.2E-93 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like Tbd_0971 51d5cb63c31a0d2ebef83c5168d7aec8 267 Gene3D G3DSA:3.30.420.10 13 224 2.5E-19 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0971 51d5cb63c31a0d2ebef83c5168d7aec8 267 SUPERFAMILY SSF53098 9 263 4.75E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 3.2E-103 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 257 5.3E-30 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 138 2.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 48 1.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 SUPERFAMILY SSF51161 2 258 3.14E-79 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Gene3D G3DSA:2.160.10.10 1 190 7.0E-53 T 11-10-2018 Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 45.979 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 PIRSF PIRSF000456 1 258 1.5E-102 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Tbd_0797 6a12c81970f973d34d70fa0c8667fc9a 258 Gene3D G3DSA:1.20.1180.10 193 258 1.5E-25 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Tbd_0480 be6f6b7d0483ae1bd6d9a6f58278c106 260 SUPERFAMILY SSF53474 22 256 1.25E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0480 be6f6b7d0483ae1bd6d9a6f58278c106 260 Gene3D G3DSA:3.40.50.1820 13 259 3.8E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_0480 be6f6b7d0483ae1bd6d9a6f58278c106 260 Pfam PF01738 Dienelactone hydrolase family 35 257 2.8E-42 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Tbd_0261 789c1bc43e6c1e4f1007b9530e992615 281 Gene3D G3DSA:2.40.10.350 186 260 9.8E-30 T 11-10-2018 Tbd_0261 789c1bc43e6c1e4f1007b9530e992615 281 PIRSF PIRSF038471 7 281 3.4E-60 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tbd_0261 789c1bc43e6c1e4f1007b9530e992615 281 Pfam PF04085 rod shape-determining protein MreC 131 272 1.8E-32 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tbd_0261 789c1bc43e6c1e4f1007b9530e992615 281 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 273 3.8E-35 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tbd_0261 789c1bc43e6c1e4f1007b9530e992615 281 Gene3D G3DSA:2.40.10.340 128 271 9.8E-30 T 11-10-2018 Tbd_0236 f682e8409778580a0e80e457d71546ab 343 Pfam PF01988 VIT family 127 335 6.3E-62 T 11-10-2018 IPR008217 Ccc1 family Tbd_0802 f5e76fa2dd8fafb3f3dc421a8c8e7827 333 Pfam PF01699 Sodium/calcium exchanger protein 3 159 1.2E-14 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_0802 f5e76fa2dd8fafb3f3dc421a8c8e7827 333 Pfam PF01699 Sodium/calcium exchanger protein 194 332 1.1E-10 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_0802 f5e76fa2dd8fafb3f3dc421a8c8e7827 333 Gene3D G3DSA:1.20.58.1130 10 225 2.2E-36 T 11-10-2018 Tbd_0802 f5e76fa2dd8fafb3f3dc421a8c8e7827 333 Gene3D G3DSA:1.20.1420.30 33 305 2.2E-36 T 11-10-2018 Tbd_0046 a5b786227d74573779098744b3d72b68 348 Pfam PF01565 FAD binding domain 3 130 2.7E-22 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tbd_0046 a5b786227d74573779098744b3d72b68 348 SUPERFAMILY SSF55103 130 346 4.09E-20 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tbd_0046 a5b786227d74573779098744b3d72b68 348 SUPERFAMILY SSF56176 5 168 7.27E-34 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tbd_0046 a5b786227d74573779098744b3d72b68 348 Gene3D G3DSA:3.30.465.10 48 167 1.1E-33 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tbd_0841 b91d38dc193d3f0d64b25a340ce3cc9d 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 121 1.7E-26 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Tbd_0841 b91d38dc193d3f0d64b25a340ce3cc9d 126 SUPERFAMILY SSF64076 1 123 3.27E-32 T 11-10-2018 IPR036748 MTH938-like superfamily Tbd_0841 b91d38dc193d3f0d64b25a340ce3cc9d 126 Gene3D G3DSA:3.40.1230.10 1 125 2.1E-32 T 11-10-2018 IPR036748 MTH938-like superfamily Tbd_0884 c51ae6edbc63fa40d4753fe1db63ee8e 122 Gene3D G3DSA:3.40.50.10600 1 113 2.5E-28 T 11-10-2018 IPR038396 SpoIIAA-like superfamily Tbd_0884 c51ae6edbc63fa40d4753fe1db63ee8e 122 Pfam PF11964 SpoIIAA-like 10 112 2.5E-18 T 11-10-2018 IPR021866 SpoIIAA-like Tbd_0884 c51ae6edbc63fa40d4753fe1db63ee8e 122 SUPERFAMILY SSF52091 4 112 5.89E-31 T 11-10-2018 IPR036513 STAS domain superfamily Tbd_1927 6225883f13e3b4ab12b0b4302ad16848 253 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 53 216 4.4E-50 T 11-10-2018 IPR000160 GGDEF domain Tbd_1927 6225883f13e3b4ab12b0b4302ad16848 253 Gene3D G3DSA:3.30.70.270 40 217 6.8E-55 T 11-10-2018 Tbd_1927 6225883f13e3b4ab12b0b4302ad16848 253 SMART SM00267 43 217 1.7E-54 T 11-10-2018 IPR000160 GGDEF domain Tbd_1927 6225883f13e3b4ab12b0b4302ad16848 253 Pfam PF00990 Diguanylate cyclase, GGDEF domain 56 212 2.3E-47 T 11-10-2018 IPR000160 GGDEF domain Tbd_1927 6225883f13e3b4ab12b0b4302ad16848 253 SUPERFAMILY SSF55073 59 216 3.77E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Tbd_1931 13a67ed61a394e20a61dc367a3ff38b5 341 Gene3D G3DSA:3.60.20.30 224 340 1.9E-29 T 11-10-2018 Tbd_1931 13a67ed61a394e20a61dc367a3ff38b5 341 SUPERFAMILY SSF56235 46 327 1.29E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tbd_1931 13a67ed61a394e20a61dc367a3ff38b5 341 Pfam PF01112 Asparaginase 47 329 1.8E-61 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 SUPERFAMILY SSF51717 7 274 2.49E-99 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 Pfam PF00809 Pterin binding enzyme 19 257 2.4E-83 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 Gene3D G3DSA:3.20.20.20 1 279 1.4E-106 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 271 1.7E-96 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Tbd_1134 913e1ad6d031f7cd029d865f281544fa 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tbd_1094 087ba9298e0dc06d460a74271245dfa9 112 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 108 6.1E-17 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tbd_1094 087ba9298e0dc06d460a74271245dfa9 112 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 101 3.2E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tbd_2520 c4c9d34d1a14f46f9bf54d149f439da7 357 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 9.8E-79 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Tbd_2520 c4c9d34d1a14f46f9bf54d149f439da7 357 Gene3D G3DSA:1.20.1420.30 35 309 6.7E-88 T 11-10-2018 Tbd_2520 c4c9d34d1a14f46f9bf54d149f439da7 357 Pfam PF01699 Sodium/calcium exchanger protein 175 316 3.8E-29 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_2520 c4c9d34d1a14f46f9bf54d149f439da7 357 Pfam PF01699 Sodium/calcium exchanger protein 5 144 8.5E-28 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tbd_2520 c4c9d34d1a14f46f9bf54d149f439da7 357 Gene3D G3DSA:1.20.58.1130 8 206 6.7E-88 T 11-10-2018 Tbd_2015 77d7273e2b99ea8ea9f7b53938955056 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 189 1.1E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Tbd_2015 77d7273e2b99ea8ea9f7b53938955056 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 7.6E-81 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Tbd_2015 77d7273e2b99ea8ea9f7b53938955056 191 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 190 24.74 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Tbd_2015 77d7273e2b99ea8ea9f7b53938955056 191 PIRSF PIRSF006102 1 191 7.7E-58 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Tbd_1206 7c0db75800f4def25a1221bfbba6e0f9 70 SUPERFAMILY SSF51161 29 65 1.66E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_1206 7c0db75800f4def25a1221bfbba6e0f9 70 Gene3D G3DSA:2.160.10.10 27 69 6.0E-15 T 11-10-2018 Tbd_1571 26323e932fe9326fa6e4d21aad269fac 381 Gene3D G3DSA:1.10.443.10 162 326 3.9E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_1571 26323e932fe9326fa6e4d21aad269fac 381 Pfam PF00589 Phage integrase family 187 317 2.8E-13 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_1571 26323e932fe9326fa6e4d21aad269fac 381 SUPERFAMILY SSF56349 58 320 2.09E-49 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2811 0ff0b08ffb59e7d8e40f95366877494a 235 SUPERFAMILY SSF88713 2 233 1.48E-72 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tbd_2811 0ff0b08ffb59e7d8e40f95366877494a 235 Pfam PF03746 LamB/YcsF family 2 232 9.6E-78 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Tbd_2811 0ff0b08ffb59e7d8e40f95366877494a 235 Gene3D G3DSA:3.20.20.370 1 235 7.8E-81 T 11-10-2018 Tbd_0280 2288ca67d8350d729d1c25d165051c49 131 SUPERFAMILY SSF101386 5 127 2.91E-40 T 11-10-2018 Tbd_0280 2288ca67d8350d729d1c25d165051c49 131 PIRSF PIRSF029826 3 122 2.2E-45 T 11-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Tbd_0280 2288ca67d8350d729d1c25d165051c49 131 Gene3D G3DSA:1.10.287.1080 5 114 5.8E-35 T 11-10-2018 Tbd_0280 2288ca67d8350d729d1c25d165051c49 131 Pfam PF12643 MazG-like family 40 117 1.4E-14 T 11-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Tbd_2431 d0fabe51cead2bd73aff48918d93879d 164 SUPERFAMILY SSF52833 29 163 1.07E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_2431 d0fabe51cead2bd73aff48918d93879d 164 Pfam PF00578 AhpC/TSA family 30 142 1.6E-25 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Tbd_2431 d0fabe51cead2bd73aff48918d93879d 164 Gene3D G3DSA:3.40.30.10 20 164 8.6E-42 T 11-10-2018 Tbd_2273 703f55c18dfcb0bbaaf6e77829bb806c 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 285 4.5E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_2273 703f55c18dfcb0bbaaf6e77829bb806c 299 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 93 287 3.0E-75 T 11-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 Tbd_2273 703f55c18dfcb0bbaaf6e77829bb806c 299 SUPERFAMILY SSF161098 103 286 2.62E-27 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_2273 703f55c18dfcb0bbaaf6e77829bb806c 299 Gene3D G3DSA:1.10.3720.10 106 291 2.2E-24 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0944 1adef1849f07bf027a8b3573404e97b3 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 122 4.5E-43 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Tbd_0944 1adef1849f07bf027a8b3573404e97b3 127 PIRSF PIRSF005610 1 120 1.1E-30 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Tbd_2398 69baa1adb3903f0e923e1fb1967c649d 72 Pfam PF11127 Protein of unknown function (DUF2892) 2 62 3.1E-16 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_1115 554aa6295ad611d8d24f088d93b07463 204 Pfam PF03458 UPF0126 domain 7 79 2.7E-17 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Tbd_1115 554aa6295ad611d8d24f088d93b07463 204 Pfam PF03458 UPF0126 domain 92 165 5.9E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Tbd_2487 034662dc4b4b5407e4e79ece33e7aac6 219 TIGRFAM TIGR02807 cas6_cmx6: CRISPR-associated protein Cas6, subtype MYXAN 17 207 9.2E-76 T 11-10-2018 IPR014174 CRISPR-associated protein, Cas6-related Tbd_2487 034662dc4b4b5407e4e79ece33e7aac6 219 Pfam PF09559 Cas6 Crispr 19 209 7.6E-58 T 11-10-2018 IPR014174 CRISPR-associated protein, Cas6-related Tbd_2195 e9602dcb8044f39572a0d3016a114f6d 165 Gene3D G3DSA:3.90.950.20 1 164 2.3E-59 T 11-10-2018 IPR036653 CinA-like, C-terminal Tbd_2195 e9602dcb8044f39572a0d3016a114f6d 165 Pfam PF02464 Competence-damaged protein 11 163 6.6E-57 T 11-10-2018 IPR008136 CinA, C-terminal Tbd_2195 e9602dcb8044f39572a0d3016a114f6d 165 SUPERFAMILY SSF142433 7 163 2.62E-55 T 11-10-2018 IPR036653 CinA-like, C-terminal Tbd_2195 e9602dcb8044f39572a0d3016a114f6d 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 1.3E-46 T 11-10-2018 IPR008136 CinA, C-terminal Tbd_0365 079a473036cb9f678a6a2df4a49f5709 103 Pfam PF00589 Phage integrase family 22 87 1.2E-7 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tbd_0365 079a473036cb9f678a6a2df4a49f5709 103 Gene3D G3DSA:1.10.443.10 2 97 3.4E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tbd_0365 079a473036cb9f678a6a2df4a49f5709 103 SUPERFAMILY SSF56349 22 100 4.71E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 5.1E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 5.1E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 5.1E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 5.1E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 5.1E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 45.065 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 1.8E-52 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 1.7E-55 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 SUPERFAMILY SSF53098 1 153 7.02E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Tbd_2214 43d5fd54c18de508a672fed97022c03e 171 Gene3D G3DSA:3.30.420.10 3 155 1.4E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tbd_0314 b9abdd651fd8803f8f15f2e8692ff1b7 369 Gene3D G3DSA:3.40.50.2000 176 350 4.5E-15 T 11-10-2018 Tbd_0314 b9abdd651fd8803f8f15f2e8692ff1b7 369 SUPERFAMILY SSF53756 4 364 5.27E-28 T 11-10-2018 Tbd_0314 b9abdd651fd8803f8f15f2e8692ff1b7 369 Pfam PF13692 Glycosyl transferases group 1 194 331 3.7E-21 T 11-10-2018 Tbd_0314 b9abdd651fd8803f8f15f2e8692ff1b7 369 Gene3D G3DSA:3.40.50.2000 18 358 4.5E-15 T 11-10-2018 Tbd_1029 fd75427a8aba543118e7e94c24d22a72 181 SUPERFAMILY SSF81342 1 179 1.96E-39 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tbd_1029 fd75427a8aba543118e7e94c24d22a72 181 Pfam PF01292 Prokaryotic cytochrome b561 6 174 6.5E-30 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Tbd_1923 30392f5bae00e14d720cf84a0c45cd80 386 Gene3D G3DSA:1.20.1250.20 2 180 5.4E-25 T 11-10-2018 Tbd_1923 30392f5bae00e14d720cf84a0c45cd80 386 Pfam PF12832 MFS_1 like family 6 359 6.8E-90 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain Tbd_1923 30392f5bae00e14d720cf84a0c45cd80 386 PIRSF PIRSF004925 1 386 1.9E-106 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Tbd_1923 30392f5bae00e14d720cf84a0c45cd80 386 SUPERFAMILY SSF103473 6 377 1.31E-50 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_1923 30392f5bae00e14d720cf84a0c45cd80 386 Gene3D G3DSA:1.20.1250.20 188 381 3.2E-44 T 11-10-2018 Tbd_1278 9bd415dd701b3be8e6ff3ddfdd19b481 291 Gene3D G3DSA:3.90.1580.10 46 290 2.8E-53 T 11-10-2018 Tbd_1278 9bd415dd701b3be8e6ff3ddfdd19b481 291 Pfam PF03781 Sulfatase-modifying factor enzyme 1 54 288 3.3E-44 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Tbd_1278 9bd415dd701b3be8e6ff3ddfdd19b481 291 SUPERFAMILY SSF56436 53 289 1.44E-53 T 11-10-2018 IPR016187 C-type lectin fold Tbd_1739 6be8028aaa9f43fd4f614e9d3a777d8a 245 SUPERFAMILY SSF54862 35 221 1.78E-69 T 11-10-2018 Tbd_1739 6be8028aaa9f43fd4f614e9d3a777d8a 245 Pfam PF13247 4Fe-4S dicluster domain 90 183 7.5E-31 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_1739 6be8028aaa9f43fd4f614e9d3a777d8a 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 128 139 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_1739 6be8028aaa9f43fd4f614e9d3a777d8a 245 Gene3D G3DSA:3.30.70.20 65 236 1.4E-61 T 11-10-2018 Tbd_1739 6be8028aaa9f43fd4f614e9d3a777d8a 245 Gene3D G3DSA:3.30.70.20 28 64 2.2E-6 T 11-10-2018 Tbd_1063 96a538ee449f93d8d52a8ed12ee78d3c 104 Pfam PF11373 Protein of unknown function (DUF3175) 15 100 9.4E-44 T 11-10-2018 IPR021513 Ralstonia phage RSL1, Orf186 Tbd_0768 8a0cc04a1aafd3fb75e0ef0039db0573 389 Gene3D G3DSA:3.40.640.10 7 389 9.3E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tbd_0768 8a0cc04a1aafd3fb75e0ef0039db0573 389 SUPERFAMILY SSF53383 9 388 2.79E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tbd_0768 8a0cc04a1aafd3fb75e0ef0039db0573 389 Pfam PF00155 Aminotransferase class I and II 36 383 1.7E-54 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tbd_0768 8a0cc04a1aafd3fb75e0ef0039db0573 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tbd_0651 1f82b33794a7a115a4b52f1edc3e99be 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 143 6.5E-26 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like Tbd_0651 1f82b33794a7a115a4b52f1edc3e99be 149 SUPERFAMILY SSF55961 2 144 2.04E-42 T 11-10-2018 Tbd_0651 1f82b33794a7a115a4b52f1edc3e99be 149 Gene3D G3DSA:3.30.530.20 3 146 4.0E-39 T 11-10-2018 IPR023393 START-like domain superfamily Tbd_0871 df60f9d01cea5c498efbc4504330684f 303 Pfam PF03692 Putative zinc- or iron-chelating domain 37 131 2.7E-10 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Tbd_0251 5a48cd64d1aa3ed1efc5dee345b2696a 142 Gene3D G3DSA:2.60.40.3340 14 142 1.6E-33 T 11-10-2018 Tbd_0251 5a48cd64d1aa3ed1efc5dee345b2696a 142 Pfam PF14467 Domain of unknown function (DUF4426) 23 141 3.1E-38 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 Tbd_0074 ffc2de2615e6861447762400e5839e37 334 ProSitePatterns PS00519 AsnC-type HTH domain signature. 189 215 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Tbd_0074 ffc2de2615e6861447762400e5839e37 334 Gene3D G3DSA:3.30.70.3460 195 333 5.0E-37 T 11-10-2018 Tbd_0074 ffc2de2615e6861447762400e5839e37 334 Gene3D G3DSA:3.30.70.3460 64 150 2.8E-19 T 11-10-2018 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 Gene3D G3DSA:1.10.760.10 74 161 1.0E-34 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 PRINTS PR00607 Class IE cytochrome C signature 131 143 1.4E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 PRINTS PR00607 Class IE cytochrome C signature 88 99 1.4E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 PRINTS PR00607 Class IE cytochrome C signature 99 109 1.4E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 PRINTS PR00607 Class IE cytochrome C signature 146 157 1.4E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 77 156 1.5E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1398 a773c759b0b7b9e25824602589b2cc75 161 SUPERFAMILY SSF46626 80 158 5.38E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1843 049ff3157b6d64f4ef9c9d99f24b6372 169 Gene3D G3DSA:3.40.1260.10 32 156 4.5E-15 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1843 049ff3157b6d64f4ef9c9d99f24b6372 169 Pfam PF02635 DsrE/DsrF-like family 34 156 9.0E-19 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Tbd_1843 049ff3157b6d64f4ef9c9d99f24b6372 169 SUPERFAMILY SSF75169 34 156 3.14E-19 T 11-10-2018 IPR027396 DsrEFH-like Tbd_2579 aaad0763d73cfe827b556f0666924b3b 185 Gene3D G3DSA:3.40.1740.10 1 185 4.7E-66 T 11-10-2018 Tbd_2579 aaad0763d73cfe827b556f0666924b3b 185 SUPERFAMILY SSF143456 5 185 4.84E-63 T 11-10-2018 Tbd_2579 aaad0763d73cfe827b556f0666924b3b 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 185 37.386 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 Tbd_2579 aaad0763d73cfe827b556f0666924b3b 185 Pfam PF02622 Uncharacterized ACR, COG1678 15 172 1.8E-46 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 Tbd_1329 1d1721e87eedcf8b93a49ee6a2665b4f 425 SUPERFAMILY SSF56954 3 414 1.57E-76 T 11-10-2018 Tbd_1329 1d1721e87eedcf8b93a49ee6a2665b4f 425 Gene3D G3DSA:1.20.1600.10 14 419 1.7E-65 T 11-10-2018 Tbd_1329 1d1721e87eedcf8b93a49ee6a2665b4f 425 Pfam PF02321 Outer membrane efflux protein 41 212 3.2E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_1329 1d1721e87eedcf8b93a49ee6a2665b4f 425 Pfam PF02321 Outer membrane efflux protein 242 414 1.6E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2287 73178d6fa549272e8ad468fcad7df90c 251 Pfam PF09997 Predicted membrane protein (DUF2238) 52 200 4.2E-54 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Tbd_2287 73178d6fa549272e8ad468fcad7df90c 251 PIRSF PIRSF020606 11 223 6.4E-72 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 Gene3D G3DSA:1.10.760.10 73 158 1.1E-50 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 71 278 4.1E-60 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 SUPERFAMILY SSF46626 44 163 1.01E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 Gene3D G3DSA:1.10.760.10 55 274 1.1E-50 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 PIRSF PIRSF038455 1 278 9.3E-79 T 11-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Tbd_0918 b259e62595c4cb49671f497b5fb26f0f 278 SUPERFAMILY SSF46626 170 277 7.92E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_1884 2467ea5c8e2674c056277abeddb651d1 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 21 234 1.4E-15 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1884 2467ea5c8e2674c056277abeddb651d1 326 SUPERFAMILY SSF51735 16 320 1.37E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_1884 2467ea5c8e2674c056277abeddb651d1 326 Gene3D G3DSA:3.40.50.720 19 321 2.9E-23 T 11-10-2018 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 Gene3D G3DSA:1.10.760.10 43 123 3.4E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 SUPERFAMILY SSF46626 8 129 3.44E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 PRINTS PR00607 Class IE cytochrome C signature 66 76 4.7E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 PRINTS PR00607 Class IE cytochrome C signature 94 106 4.7E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 PRINTS PR00607 Class IE cytochrome C signature 109 120 4.7E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 PRINTS PR00607 Class IE cytochrome C signature 55 66 4.7E-12 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Tbd_0840 b86d2c3a3dad64cf2ad82acd9a37ea02 157 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 44 119 7.3E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1516 c99a8841533d1d3af4b63ffeb52863e8 120 Gene3D G3DSA:2.10.109.10 2 113 6.8E-23 T 11-10-2018 Tbd_1516 c99a8841533d1d3af4b63ffeb52863e8 120 Pfam PF00717 Peptidase S24-like 31 95 2.3E-13 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tbd_1516 c99a8841533d1d3af4b63ffeb52863e8 120 SUPERFAMILY SSF51306 24 107 1.57E-22 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tbd_2630 cb4e7b9154f96f71c97152531474dfb3 233 Pfam PF09335 SNARE associated Golgi protein 72 187 1.6E-14 T 11-10-2018 IPR032816 SNARE associated Golgi protein Tbd_1992 a0c9d8f24717a1094c574dcc8e8e2c20 111 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 3 107 3.8E-37 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1992 a0c9d8f24717a1094c574dcc8e8e2c20 111 PIRSF PIRSF006821 1 109 1.6E-16 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_0682 917f11140ecf2f8b17e0e12b67c66a65 294 Gene3D G3DSA:3.40.50.150 45 201 1.5E-5 T 11-10-2018 Tbd_0682 917f11140ecf2f8b17e0e12b67c66a65 294 Pfam PF13679 Methyltransferase domain 51 190 6.3E-43 T 11-10-2018 IPR025714 Methyltransferase domain Tbd_0682 917f11140ecf2f8b17e0e12b67c66a65 294 SUPERFAMILY SSF53335 61 190 1.25E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_0559 9018b5f4d64735f37e21084e6597310c 83 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 8 76 1.3E-9 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Tbd_0556 33964f661f19e528cd3171a3910cb2db 346 SUPERFAMILY SSF54862 104 298 5.23E-9 T 11-10-2018 Tbd_0556 33964f661f19e528cd3171a3910cb2db 346 Pfam PF12801 4Fe-4S binding domain 207 241 0.0027 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0556 33964f661f19e528cd3171a3910cb2db 346 Pfam PF12801 4Fe-4S binding domain 94 137 2.4E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_0761 36357aa531188786e5804b9800ef6504 215 Pfam PF05137 Fimbrial assembly protein (PilN) 126 199 4.4E-5 T 11-10-2018 IPR007813 Fimbrial assembly PilN Tbd_1217 e776d1fa8b90ba1640c8607c4dd672cb 164 Gene3D G3DSA:2.40.440.10 1 164 8.3E-36 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tbd_1217 e776d1fa8b90ba1640c8607c4dd672cb 164 Pfam PF03734 L,D-transpeptidase catalytic domain 4 163 1.8E-21 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Tbd_1217 e776d1fa8b90ba1640c8607c4dd672cb 164 SUPERFAMILY SSF141523 2 163 3.53E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tbd_0719 3f8b04b86f421fc268be828d34509091 387 SUPERFAMILY SSF103473 6 379 2.22E-34 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_0719 3f8b04b86f421fc268be828d34509091 387 Gene3D G3DSA:1.20.1250.20 209 386 8.3E-12 T 11-10-2018 Tbd_0719 3f8b04b86f421fc268be828d34509091 387 Gene3D G3DSA:1.20.1250.20 5 195 4.8E-19 T 11-10-2018 Tbd_0719 3f8b04b86f421fc268be828d34509091 387 Pfam PF07690 Major Facilitator Superfamily 12 285 1.7E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_2479 e5c07df5abe858b9f2b818415da378a3 244 SUPERFAMILY SSF103501 7 233 9.55E-47 T 11-10-2018 IPR036197 NarG-like superfamily Tbd_2479 e5c07df5abe858b9f2b818415da378a3 244 Pfam PF02665 Nitrate reductase gamma subunit 66 212 1.6E-14 T 11-10-2018 IPR023234 NarG-like domain Tbd_2479 e5c07df5abe858b9f2b818415da378a3 244 Gene3D G3DSA:1.20.950.20 47 219 1.1E-19 T 11-10-2018 Tbd_2294 a0c5f41e6e26f769350ffc8449f7a635 370 PIRSF PIRSF007313 1 369 1.9E-151 T 11-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Tbd_2294 a0c5f41e6e26f769350ffc8449f7a635 370 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 3 365 2.8E-145 T 11-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Tbd_0778 2b53c989609b6464a42f2fc7c2f34eae 253 Pfam PF01048 Phosphorylase superfamily 2 212 3.5E-42 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Tbd_0778 2b53c989609b6464a42f2fc7c2f34eae 253 Gene3D G3DSA:3.40.50.1580 1 251 1.0E-73 T 11-10-2018 Tbd_0778 2b53c989609b6464a42f2fc7c2f34eae 253 SUPERFAMILY SSF53167 1 244 1.67E-76 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Tbd_0778 2b53c989609b6464a42f2fc7c2f34eae 253 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 253 33.126 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Tbd_2064 7343541473a347f623037a8534af23aa 327 Gene3D G3DSA:3.40.50.720 1 323 2.0E-80 T 11-10-2018 Tbd_2064 7343541473a347f623037a8534af23aa 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 1.1E-40 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_2064 7343541473a347f623037a8534af23aa 327 SUPERFAMILY SSF51735 1 319 3.69E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2270 17716889f2b1bce749cb499c5c0b5adb 254 SUPERFAMILY SSF53850 24 252 3.07E-41 T 11-10-2018 Tbd_2270 17716889f2b1bce749cb499c5c0b5adb 254 Gene3D G3DSA:3.40.190.10 107 216 1.3E-88 T 11-10-2018 Tbd_2270 17716889f2b1bce749cb499c5c0b5adb 254 Gene3D G3DSA:3.40.190.10 29 252 1.3E-88 T 11-10-2018 Tbd_2270 17716889f2b1bce749cb499c5c0b5adb 254 Pfam PF13531 Bacterial extracellular solute-binding protein 28 252 1.3E-36 T 11-10-2018 Tbd_2741 bcc82739fa26609d793f919e5e18a894 78 Pfam PF09851 Short C-terminal domain 51 76 3.0E-10 T 11-10-2018 IPR018649 SHOCT domain Tbd_1222 15143acb436c5cb8d86819003a9de74f 328 SUPERFAMILY SSF103481 228 312 4.05E-8 T 11-10-2018 Tbd_1222 15143acb436c5cb8d86819003a9de74f 328 Pfam PF00892 EamA-like transporter family 181 313 9.1E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_1222 15143acb436c5cb8d86819003a9de74f 328 Pfam PF00892 EamA-like transporter family 41 168 1.9E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_1222 15143acb436c5cb8d86819003a9de74f 328 SUPERFAMILY SSF103481 79 172 4.97E-11 T 11-10-2018 Tbd_2336 a1591774ac842a3ea9797f0f2a32af70 330 SUPERFAMILY SSF56112 5 299 5.69E-59 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_2336 a1591774ac842a3ea9797f0f2a32af70 330 Gene3D G3DSA:3.90.1200.10 91 326 9.4E-74 T 11-10-2018 Tbd_2336 a1591774ac842a3ea9797f0f2a32af70 330 Pfam PF01636 Phosphotransferase enzyme family 22 245 3.7E-34 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Tbd_2336 a1591774ac842a3ea9797f0f2a32af70 330 Gene3D G3DSA:3.30.200.20 1 90 5.1E-24 T 11-10-2018 Tbd_0483 eec727900aba91c345cdb0211bbabebb 172 SUPERFAMILY SSF54427 18 143 4.16E-26 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_0483 eec727900aba91c345cdb0211bbabebb 172 Pfam PF13474 SnoaL-like domain 26 144 4.5E-13 T 11-10-2018 IPR037401 SnoaL-like domain Tbd_0483 eec727900aba91c345cdb0211bbabebb 172 Gene3D G3DSA:3.10.450.50 18 148 4.1E-29 T 11-10-2018 Tbd_0521 f107bc79abd337a3a5feb179fc2abf4c 66 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 4.4E-23 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 Tbd_2065 b872fd1b745c72830362a0b5b4423e0e 624 Pfam PF02705 K+ potassium transporter 15 546 2.3E-211 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 Tbd_2065 b872fd1b745c72830362a0b5b4423e0e 624 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 6 624 34.834 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup Tbd_1470 313eace6eb85f430c8472a9426f617d9 205 Gene3D G3DSA:3.60.15.10 3 202 3.8E-31 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_1470 313eace6eb85f430c8472a9426f617d9 205 SUPERFAMILY SSF56281 2 201 5.8E-17 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tbd_0709 68d1c6d8e22b22d03f47b48c01327bb7 181 Pfam PF04205 FMN-binding domain 95 173 9.3E-10 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_0709 68d1c6d8e22b22d03f47b48c01327bb7 181 SMART SM00900 95 176 1.4E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 150 2.1E-16 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 Gene3D G3DSA:3.30.450.90 153 286 3.0E-42 T 11-10-2018 Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 SUPERFAMILY SSF160246 4 148 2.17E-31 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 SUPERFAMILY SSF52540 177 559 6.42E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 Pfam PF00437 Type II/IV secretion system protein 190 453 2.5E-71 T 11-10-2018 IPR001482 Type II/IV secretion system protein Tbd_0547 22ccdb0b71759ef9dd5073693993005a 565 Gene3D G3DSA:3.40.50.300 287 562 1.2E-106 T 11-10-2018 Tbd_1627 3e6ea536c1f86402e47b0c51460e81ec 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 6.0E-21 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tbd_1627 3e6ea536c1f86402e47b0c51460e81ec 300 SUPERFAMILY SSF64518 1 300 1.96E-69 T 11-10-2018 Tbd_1627 3e6ea536c1f86402e47b0c51460e81ec 300 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 187 1.0E-63 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Tbd_1627 3e6ea536c1f86402e47b0c51460e81ec 300 Gene3D G3DSA:1.20.1330.10 40 247 9.8E-65 T 11-10-2018 Tbd_1515 de0e305d9821990143d29cd0834f567b 150 SUPERFAMILY SSF54909 11 125 3.59E-6 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Tbd_1729 905b4fcff1cf72aa6120bfb7cb70a1f0 254 Pfam PF13852 Protein of unknown function (DUF4197) 51 249 1.0E-73 T 11-10-2018 IPR025245 Protein of unknown function DUF4197 Tbd_0464 9a3b49d7fab9035e962f606251c69d6e 187 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 16 187 27.226 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Tbd_0464 9a3b49d7fab9035e962f606251c69d6e 187 Pfam PF04345 Chorismate lyase 26 184 6.9E-28 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Tbd_0464 9a3b49d7fab9035e962f606251c69d6e 187 Gene3D G3DSA:3.40.1410.10 10 185 3.1E-44 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tbd_0464 9a3b49d7fab9035e962f606251c69d6e 187 SUPERFAMILY SSF64288 10 184 1.28E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 SUPERFAMILY SSF50715 1 194 9.24E-56 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Gene3D G3DSA:2.170.120.20 97 195 2.4E-24 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 14 95 6.0E-42 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 186 31.224 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Gene3D G3DSA:2.40.240.10 2 95 2.1E-31 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Pfam PF01386 Ribosomal L25p family 7 92 8.9E-25 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 23.053 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 189 4.8E-27 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain Tbd_0388 d1c37dd884f78c5a6156a9c2ef0753fe 201 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 176 2.0E-41 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tbd_1405 849d33fcc7559c7c5c7aa16eebee7800 215 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 13 165 2.0E-32 T 11-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 Tbd_1405 849d33fcc7559c7c5c7aa16eebee7800 215 SUPERFAMILY SSF89155 7 168 9.16E-31 T 11-10-2018 IPR036411 TorD-like superfamily Tbd_1405 849d33fcc7559c7c5c7aa16eebee7800 215 Pfam PF02613 Nitrate reductase delta subunit 43 161 2.3E-10 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Tbd_1405 849d33fcc7559c7c5c7aa16eebee7800 215 Gene3D G3DSA:1.10.3480.10 3 196 1.9E-10 T 11-10-2018 Tbd_0575 144542d5bf8e850d3c228abdbd7cc126 169 SUPERFAMILY SSF75169 4 167 2.94E-20 T 11-10-2018 IPR027396 DsrEFH-like Tbd_0575 144542d5bf8e850d3c228abdbd7cc126 169 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 168 1.6E-49 T 11-10-2018 IPR032836 DsrE2-like family Tbd_0575 144542d5bf8e850d3c228abdbd7cc126 169 Gene3D G3DSA:3.40.1260.10 1 169 1.7E-38 T 11-10-2018 IPR027396 DsrEFH-like Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 PIRSF PIRSF004669 1 89 4.0E-31 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.8E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.8E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.8E-22 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 6.5E-32 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Tbd_1611 8133f598f7a582f40db12352b01f65b3 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.6E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tbd_1536 dfce293ebfb19cd9ffb669c0872997a1 249 SUPERFAMILY SSF53448 9 222 2.34E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1536 dfce293ebfb19cd9ffb669c0872997a1 249 Gene3D G3DSA:3.90.550.10 2 235 1.3E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1536 dfce293ebfb19cd9ffb669c0872997a1 249 Pfam PF00535 Glycosyl transferase family 2 11 118 4.6E-22 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0612 80504158261222737fad1a0fb8da285f 582 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 24 416 2.4E-104 T 11-10-2018 IPR003776 YcaO-like domain Tbd_0612 80504158261222737fad1a0fb8da285f 582 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 72 403 4.8E-82 T 11-10-2018 IPR003776 YcaO-like domain Tbd_0935 a012219df4ab7e3de847e983f2dbf27d 646 SUPERFAMILY SSF55874 4 111 4.45E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tbd_2116 ff79e9f2f74c42b1781bdb2d1d8f2337 420 Gene3D G3DSA:1.20.1600.10 17 414 5.0E-48 T 11-10-2018 Tbd_2116 ff79e9f2f74c42b1781bdb2d1d8f2337 420 Pfam PF02321 Outer membrane efflux protein 230 407 5.3E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2116 ff79e9f2f74c42b1781bdb2d1d8f2337 420 Pfam PF02321 Outer membrane efflux protein 24 206 2.8E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tbd_2116 ff79e9f2f74c42b1781bdb2d1d8f2337 420 SUPERFAMILY SSF56954 1 413 1.57E-53 T 11-10-2018 Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 Pfam PF00535 Glycosyl transferase family 2 381 561 2.0E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 Pfam PF00535 Glycosyl transferase family 2 3 89 3.6E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 SUPERFAMILY SSF53448 3 181 4.78E-13 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 Gene3D G3DSA:3.90.550.10 1 108 1.2E-9 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 SUPERFAMILY SSF53448 372 611 1.41E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1882 ba42511e10ba649d6093c063147ac9d4 819 Gene3D G3DSA:3.90.550.10 369 604 1.2E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0022 f40f97ad8f33929cf6a60384a7fa4b07 485 PIRSF PIRSF006247 1 485 4.0E-154 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tbd_0022 f40f97ad8f33929cf6a60384a7fa4b07 485 Pfam PF02386 Cation transport protein 43 477 2.5E-57 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tbd_1367 b23a9719922bc5cd4c217b58631a6cb5 245 Pfam PF04972 BON domain 10 74 0.0063 T 11-10-2018 IPR007055 BON domain Tbd_1367 b23a9719922bc5cd4c217b58631a6cb5 245 Pfam PF04972 BON domain 176 244 7.5E-9 T 11-10-2018 IPR007055 BON domain Tbd_1367 b23a9719922bc5cd4c217b58631a6cb5 245 Pfam PF04972 BON domain 123 171 6.1E-6 T 11-10-2018 IPR007055 BON domain Tbd_2324 dc5a3236f8516a327a9591e0e5ad63dc 305 Pfam PF02535 ZIP Zinc transporter 159 300 1.3E-20 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tbd_2150 218de9b14e4cd2da974ee9454b56bdbc 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 161 6.8E-27 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tbd_1840 00f1b707d1078af1f1c112573dd12e80 102 SUPERFAMILY SSF46626 1 95 3.04E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2752 398bf7e1fc9660bf8b6a86f0eae1329f 244 Pfam PF13649 Methyltransferase domain 54 161 2.7E-11 T 11-10-2018 Tbd_2752 398bf7e1fc9660bf8b6a86f0eae1329f 244 SUPERFAMILY SSF53335 35 218 9.49E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_2752 398bf7e1fc9660bf8b6a86f0eae1329f 244 Gene3D G3DSA:3.40.50.150 13 232 1.4E-25 T 11-10-2018 Tbd_0453 12c60324b408859f48f586952d637adb 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 8.6E-61 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tbd_0453 12c60324b408859f48f586952d637adb 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 28.18 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tbd_0453 12c60324b408859f48f586952d637adb 148 PIRSF PIRSF002181 1 147 2.2E-48 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tbd_0453 12c60324b408859f48f586952d637adb 148 Gene3D G3DSA:3.90.1180.10 1 142 5.0E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0453 12c60324b408859f48f586952d637adb 148 Pfam PF00572 Ribosomal protein L13 15 138 1.4E-53 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tbd_0453 12c60324b408859f48f586952d637adb 148 SUPERFAMILY SSF52161 1 139 8.9E-59 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_1486 f3040c6b353f1067276580f523962a5b 245 Gene3D G3DSA:3.40.50.300 7 236 4.9E-5 T 11-10-2018 Tbd_1486 f3040c6b353f1067276580f523962a5b 245 SUPERFAMILY SSF52540 10 180 4.87E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0869 a7d52f5cb13f772ede836d88d659b023 270 SUPERFAMILY SSF52540 30 226 3.31E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0869 a7d52f5cb13f772ede836d88d659b023 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 185 267 1.9E-29 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Tbd_0869 a7d52f5cb13f772ede836d88d659b023 270 Pfam PF07728 AAA domain (dynein-related subfamily) 38 172 8.1E-32 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tbd_0869 a7d52f5cb13f772ede836d88d659b023 270 Gene3D G3DSA:3.40.50.300 23 190 7.0E-31 T 11-10-2018 Tbd_1786 c78935a023abb905ab61b50fa2bd7b98 298 Pfam PF04230 Polysaccharide pyruvyl transferase 16 232 2.8E-17 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tbd_2380 380a11a7cfba696510b4f604fc59456d 240 Pfam PF01925 Sulfite exporter TauE/SafE 5 233 7.1E-26 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tbd_1939 b7dd876add8c662de8d9270fa8fd743d 111 Pfam PF07561 Domain of Unknown Function (DUF1540) 26 57 1.6E-4 T 11-10-2018 IPR011437 Domain of unknown function DUF1540 Tbd_1939 b7dd876add8c662de8d9270fa8fd743d 111 Pfam PF07561 Domain of Unknown Function (DUF1540) 76 100 0.002 T 11-10-2018 IPR011437 Domain of unknown function DUF1540 Tbd_1981 586ec6f7ce7e73944841482d946a741a 140 SMART SM00450 28 133 5.2E-26 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1981 586ec6f7ce7e73944841482d946a741a 140 Pfam PF00581 Rhodanese-like domain 33 129 6.8E-19 T 11-10-2018 IPR001763 Rhodanese-like domain Tbd_1981 586ec6f7ce7e73944841482d946a741a 140 SUPERFAMILY SSF52821 11 136 6.55E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1981 586ec6f7ce7e73944841482d946a741a 140 Gene3D G3DSA:3.40.250.10 11 138 8.5E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Tbd_1337 b403b338387cae2c6c64bb6b68c9e180 77 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 33 8.3E-7 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 Tbd_0385 70758db36132c9401f5479725a1903a7 186 SUPERFAMILY SSF89392 16 183 1.57E-42 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Tbd_0385 70758db36132c9401f5479725a1903a7 186 Pfam PF03550 Outer membrane lipoprotein LolB 35 182 8.2E-41 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Tbd_0385 70758db36132c9401f5479725a1903a7 186 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 34 183 3.2E-24 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Tbd_0385 70758db36132c9401f5479725a1903a7 186 Gene3D G3DSA:2.50.20.10 30 184 7.5E-37 T 11-10-2018 Tbd_0385 70758db36132c9401f5479725a1903a7 186 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 184 20.683 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Tbd_0911 9bbd288cf36c0cfe45a26149dd2b85db 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 209 1.6E-34 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_0344 c609d91edf3a0a368aa7688a8a9e5432 61 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 46 3.5E-18 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Tbd_0344 c609d91edf3a0a368aa7688a8a9e5432 61 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 7 47 5.0E-13 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Tbd_0149 02b01fde7c9dba2201aa17090c9a0792 160 Pfam PF03168 Late embryogenesis abundant protein 53 138 7.6E-17 T 11-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup Tbd_0149 02b01fde7c9dba2201aa17090c9a0792 160 SMART SM00769 32 143 2.5E-12 T 11-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 Tbd_0149 02b01fde7c9dba2201aa17090c9a0792 160 Gene3D G3DSA:2.60.40.1820 28 157 2.3E-13 T 11-10-2018 Tbd_0149 02b01fde7c9dba2201aa17090c9a0792 160 SUPERFAMILY SSF117070 9 157 4.32E-29 T 11-10-2018 Tbd_1393 d5eeeaf75b32fa3b6d6e0c5b6bd75906 271 Pfam PF12679 ABC-2 family transporter protein 9 271 1.6E-37 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Tbd_2076 4f378651d504027d7a6166a173c2e20e 348 Pfam PF05987 Bacterial protein of unknown function (DUF898) 7 340 1.2E-105 T 11-10-2018 IPR010295 Protein of unknown function DUF898 Tbd_2432 5fa5581b092104c98aa96a1d5e956ab2 189 Gene3D G3DSA:2.160.10.10 9 188 6.4E-58 T 11-10-2018 Tbd_2432 5fa5581b092104c98aa96a1d5e956ab2 189 SUPERFAMILY SSF51161 15 182 7.62E-43 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Tbd_2432 5fa5581b092104c98aa96a1d5e956ab2 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 135 1.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2432 5fa5581b092104c98aa96a1d5e956ab2 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 23 52 1.8E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Tbd_2113 196bf2178582badd2dc349c16b82db5c 210 Gene3D G3DSA:1.10.530.10 78 197 2.4E-19 T 11-10-2018 Tbd_2113 196bf2178582badd2dc349c16b82db5c 210 SUPERFAMILY SSF53955 44 179 2.22E-26 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Tbd_2113 196bf2178582badd2dc349c16b82db5c 210 Pfam PF01464 Transglycosylase SLT domain 89 177 1.1E-13 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Tbd_2632 3a4b5be858d27204ee23f4390abc3e57 225 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 50 199 5.0E-52 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_2632 3a4b5be858d27204ee23f4390abc3e57 225 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 48 208 35.439 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_2632 3a4b5be858d27204ee23f4390abc3e57 225 Pfam PF01625 Peptide methionine sulfoxide reductase 50 202 2.8E-58 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_2632 3a4b5be858d27204ee23f4390abc3e57 225 SUPERFAMILY SSF55068 44 212 4.58E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_2632 3a4b5be858d27204ee23f4390abc3e57 225 Gene3D G3DSA:3.30.1060.10 35 210 1.1E-63 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Tbd_1554 bcfd8606560bbb2136f1a5c2fcea2777 139 Pfam PF02620 Uncharacterized ACR, COG1399 56 138 1.1E-12 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Tbd_2004 e8e452bb014a123e1b9f2ddc346ec93b 68 SUPERFAMILY SSF46955 18 64 1.57E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_2004 e8e452bb014a123e1b9f2ddc346ec93b 68 Gene3D G3DSA:1.10.1660.10 11 67 4.2E-8 T 11-10-2018 Tbd_1347 e074b434e4a13b6f78c2d521642d22e2 145 Pfam PF12375 Phage protein 74 131 1.2E-16 T 11-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 Tbd_1347 e074b434e4a13b6f78c2d521642d22e2 145 SUPERFAMILY SSF47413 25 67 9.25E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tbd_1347 e074b434e4a13b6f78c2d521642d22e2 145 Pfam PF01381 Helix-turn-helix 29 61 1.1E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tbd_1347 e074b434e4a13b6f78c2d521642d22e2 145 Gene3D G3DSA:1.10.260.40 27 79 9.5E-11 T 11-10-2018 Tbd_1875 cc85a05fba7f47a33457dc211206b366 241 SUPERFAMILY SSF53448 1 202 8.91E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1875 cc85a05fba7f47a33457dc211206b366 241 Gene3D G3DSA:3.90.550.10 1 215 3.6E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_1875 cc85a05fba7f47a33457dc211206b366 241 Pfam PF00535 Glycosyl transferase family 2 3 158 1.0E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_0249 f3d41ac2aebb2e08363a0fd9b259db61 315 Pfam PF02470 MlaD protein 39 117 4.3E-12 T 11-10-2018 IPR003399 Mce/MlaD Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 Gene3D G3DSA:2.140.10.20 150 575 1.4E-201 T 11-10-2018 IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 Gene3D G3DSA:1.10.760.10 51 149 1.2E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 Pfam PF02239 Cytochrome D1 heme domain 178 570 2.9E-158 T 11-10-2018 Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 SUPERFAMILY SSF51004 150 575 1.44E-129 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 SUPERFAMILY SSF46626 8 161 3.44E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0077 c4b6a4d8d8903c4b80ae1fd78ec2bbd8 575 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 141 5.3E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2510 156308b8a3a01608dbd8cab8148f9a86 52 Pfam PF11752 Protein of unknown function (DUF3309) 4 52 1.3E-21 T 11-10-2018 IPR021738 Protein of unknown function DUF3309 Tbd_0138 827d42404d50dfa2a7985d929fd832db 133 Pfam PF09086 Domain of unknown function (DUF1924) 37 129 1.1E-36 T 11-10-2018 IPR015170 Protein of unknown function DUF1924 Tbd_0138 827d42404d50dfa2a7985d929fd832db 133 SUPERFAMILY SSF46626 27 131 2.08E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0138 827d42404d50dfa2a7985d929fd832db 133 Gene3D G3DSA:1.10.760.10 19 131 3.1E-43 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_0958 b42d543392c3b8685b693251934030e6 96 Pfam PF06305 Lipopolysaccharide assembly protein A domain 27 78 6.1E-11 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Tbd_2707 84406f9e3c2d5388a9db0a571c91a7d3 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 16 216 3.0E-64 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Tbd_2707 84406f9e3c2d5388a9db0a571c91a7d3 218 Pfam PF03006 Haemolysin-III related 13 210 1.1E-37 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Tbd_0415 7570573725287954b3653454fd6d5e41 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.87 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tbd_0415 7570573725287954b3653454fd6d5e41 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.0E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tbd_0415 7570573725287954b3653454fd6d5e41 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tbd_0415 7570573725287954b3653454fd6d5e41 122 SUPERFAMILY SSF50193 1 122 3.53E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0415 7570573725287954b3653454fd6d5e41 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.0E-57 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Tbd_0415 7570573725287954b3653454fd6d5e41 122 Gene3D G3DSA:2.40.150.20 1 122 4.1E-54 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tbd_0415 7570573725287954b3653454fd6d5e41 122 SMART SM01374 1 122 3.3E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tbd_1940 71fa6c5a02ebfcdfb6f9919226127f55 308 Pfam PF01936 NYN domain 9 152 2.2E-33 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type Tbd_1940 71fa6c5a02ebfcdfb6f9919226127f55 308 Gene3D G3DSA:3.40.50.1010 2 156 6.2E-34 T 11-10-2018 Tbd_0823 780965ac0e5773eb11284b5d58f0d0fe 456 SUPERFAMILY SSF81442 3 446 3.4E-74 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0823 780965ac0e5773eb11284b5d58f0d0fe 456 Gene3D G3DSA:1.20.210.10 2 440 4.2E-108 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_0823 780965ac0e5773eb11284b5d58f0d0fe 456 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 8 417 4.6E-62 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2523 f8d4b3d316b56d465b520c15a63c067b 303 PIRSF PIRSF026649 1 302 1.8E-89 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tbd_2523 f8d4b3d316b56d465b520c15a63c067b 303 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 293 1.5E-64 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Tbd_1889 4c90d6e134ec86de73bcef02ea7fa107 283 SUPERFAMILY SSF53756 17 273 7.69E-8 T 11-10-2018 Tbd_1889 4c90d6e134ec86de73bcef02ea7fa107 283 Pfam PF13524 Glycosyl transferases group 1 180 273 5.9E-21 T 11-10-2018 Tbd_2027 3e2e153c04756ec66435eebbc6faf84d 111 Gene3D G3DSA:1.10.760.10 24 105 5.6E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2027 3e2e153c04756ec66435eebbc6faf84d 111 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 101 2.2E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2027 3e2e153c04756ec66435eebbc6faf84d 111 SUPERFAMILY SSF46626 4 109 5.87E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 111 4.4E-14 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 Pfam PF00361 Proton-conducting membrane transporter 124 352 5.2E-52 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 7.2E-30 T 11-10-2018 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 7.2E-30 T 11-10-2018 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 7.2E-30 T 11-10-2018 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 148 169 7.2E-30 T 11-10-2018 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 7.2E-30 T 11-10-2018 Tbd_2655 309804aa9e8caeeefaf75ed0e5bab42b 559 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 7.2E-30 T 11-10-2018 Tbd_0777 a7002d080a2af73b2924fed7da67a195 185 SUPERFAMILY SSF53271 13 181 2.36E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_0777 a7002d080a2af73b2924fed7da67a195 185 Pfam PF00156 Phosphoribosyl transferase domain 22 163 1.8E-18 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_0777 a7002d080a2af73b2924fed7da67a195 185 Gene3D G3DSA:3.40.50.2020 1 184 3.7E-50 T 11-10-2018 Tbd_1639 1f3506d1d361f0f452aa91e5ea2aaec7 98 SUPERFAMILY SSF101498 1 90 6.41E-16 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Tbd_1639 1f3506d1d361f0f452aa91e5ea2aaec7 98 Pfam PF04316 Anti-sigma-28 factor, FlgM 36 88 2.4E-15 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Tbd_1639 1f3506d1d361f0f452aa91e5ea2aaec7 98 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 3 91 6.9E-24 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Tbd_1242 b833911e91a46f41d9a0fb5a9de918ae 251 SUPERFAMILY SSF53335 54 237 3.88E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1242 b833911e91a46f41d9a0fb5a9de918ae 251 Gene3D G3DSA:3.40.50.150 99 251 9.7E-22 T 11-10-2018 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 216 6.6E-13 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 SUPERFAMILY SSF63380 3 98 5.91E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 SUPERFAMILY SSF52343 102 228 1.28E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 Gene3D G3DSA:2.40.30.10 1 95 2.3E-27 T 11-10-2018 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 110 129 1.5E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 158 1.5E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 50 57 1.5E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 212 1.5E-8 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 Gene3D G3DSA:3.40.50.80 96 245 2.7E-37 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tbd_2358 df9e5de1d6d5fd2fe1c7df0705e869cb 248 Pfam PF00970 Oxidoreductase FAD-binding domain 17 90 4.2E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tbd_1803 7c79b3ffed37b24f972cfb269b6a2ac7 266 Pfam PF07589 PEP-CTERM motif 237 261 2.4E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0374 98380cef8fa4148c193823114186430a 308 PIRSF PIRSF003097 5 297 2.5E-58 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Tbd_1720 e9d7cdb03a22709779636727ba0eaa51 320 Gene3D G3DSA:3.10.310.50 57 204 5.2E-46 T 11-10-2018 Tbd_1720 e9d7cdb03a22709779636727ba0eaa51 320 Pfam PF04536 TPM domain 74 197 4.9E-36 T 11-10-2018 IPR007621 TPM domain Tbd_1852 c297bc442da7bf06d81aaebab2ba8695 166 Pfam PF06181 Urate oxidase N-terminal 93 155 5.7E-9 T 11-10-2018 IPR010389 Urate oxidase N-terminal Tbd_1852 c297bc442da7bf06d81aaebab2ba8695 166 PIRSF PIRSF032086 3 166 1.9E-48 T 11-10-2018 IPR016988 Uncharacterised conserved protein UCP032086 Tbd_2620 7edc417e822833876fa2fab3f2b9b057 106 Gene3D G3DSA:3.30.1200.10 2 101 6.3E-20 T 11-10-2018 IPR036591 YggU-like superfamily Tbd_2620 7edc417e822833876fa2fab3f2b9b057 106 SUPERFAMILY SSF69786 4 94 7.59E-24 T 11-10-2018 IPR036591 YggU-like superfamily Tbd_2620 7edc417e822833876fa2fab3f2b9b057 106 Hamap MF_00634 UPF0235 protein YggU [yggU]. 11 99 14.459 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Tbd_2620 7edc417e822833876fa2fab3f2b9b057 106 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 15 86 7.3E-19 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Tbd_2620 7edc417e822833876fa2fab3f2b9b057 106 SMART SM01152 11 87 1.5E-19 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Tbd_0496 569432a3336bf32a8cfc4f1c29b9552c 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 104 1.9E-24 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Tbd_2365 06058ee8a5fd1c244a81e241731eb264 69 Gene3D G3DSA:3.30.50.10 4 68 7.0E-24 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Tbd_2365 06058ee8a5fd1c244a81e241731eb264 69 Pfam PF03884 DNA gyrase inhibitor YacG 10 59 4.0E-25 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Tbd_2365 06058ee8a5fd1c244a81e241731eb264 69 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 6 66 18.0 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Tbd_2365 06058ee8a5fd1c244a81e241731eb264 69 SUPERFAMILY SSF57716 7 63 6.56E-21 T 11-10-2018 Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 Gene3D G3DSA:3.10.180.10 1 126 7.2E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 5.3E-23 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 SUPERFAMILY SSF54593 1 127 1.34E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 129 1.1E-61 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Tbd_2343 b100e1ede594637a8a6695a9c00d2f05 137 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Tbd_1985 9679aa05d6b0f07f25057abfe832da01 308 SUPERFAMILY SSF103481 203 305 1.44E-14 T 11-10-2018 Tbd_1985 9679aa05d6b0f07f25057abfe832da01 308 SUPERFAMILY SSF103481 51 155 7.19E-14 T 11-10-2018 Tbd_1985 9679aa05d6b0f07f25057abfe832da01 308 Pfam PF00892 EamA-like transporter family 16 152 2.3E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_1985 9679aa05d6b0f07f25057abfe832da01 308 Pfam PF00892 EamA-like transporter family 165 300 6.6E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tbd_2144 d126cd1cf6034535e24f69a253f18bd6 240 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 216 8.2E-27 T 11-10-2018 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 SMART SM01329 30 409 3.1E-171 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 SUPERFAMILY SSF53659 3 412 6.91E-142 T 11-10-2018 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 413 2.9E-212 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 408 1.9E-113 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 300 319 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tbd_0854 ff09264ff62fa576b8e62c70a15642b4 413 Gene3D G3DSA:3.40.718.10 1 413 2.2E-181 T 11-10-2018 Tbd_2465 eeb61e827749caed52d55748cf0b1407 100 SUPERFAMILY SSF47240 5 93 2.71E-27 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_2465 eeb61e827749caed52d55748cf0b1407 100 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 97 6.9E-42 T 11-10-2018 IPR030907 Ferritin-like protein Tbd_0295 832dc39372316dbb90f269d19cd57c02 461 SUPERFAMILY SSF56801 17 420 4.88E-17 T 11-10-2018 Tbd_0295 832dc39372316dbb90f269d19cd57c02 461 Gene3D G3DSA:3.40.50.12780 19 353 5.2E-66 T 11-10-2018 Tbd_0566 997806f0d949d347da1fe19ecc977d77 155 Pfam PF13501 Sulfur oxidation protein SoxY 54 153 1.6E-31 T 11-10-2018 IPR032711 Ig-like SoxY domain Tbd_0566 997806f0d949d347da1fe19ecc977d77 155 Gene3D G3DSA:2.60.40.2470 33 155 6.9E-44 T 11-10-2018 IPR038162 Ig-like SoxY domain superfamily Tbd_0566 997806f0d949d347da1fe19ecc977d77 155 PIRSF PIRSF010312 1 155 8.0E-45 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY Tbd_0566 997806f0d949d347da1fe19ecc977d77 155 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 5 155 2.3E-53 T 11-10-2018 IPR016568 Sulphur oxidation, SoxY Tbd_2111 b616c5336e58be6de82913e80880897a 255 Pfam PF01564 Spermine/spermidine synthase domain 49 173 1.7E-11 T 11-10-2018 Tbd_2111 b616c5336e58be6de82913e80880897a 255 Gene3D G3DSA:3.40.50.150 17 252 2.7E-53 T 11-10-2018 Tbd_2111 b616c5336e58be6de82913e80880897a 255 SUPERFAMILY SSF53335 16 241 5.16E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tbd_1113 683948d4ab748e2f546b202e20915ac1 123 Pfam PF10861 Protein of Unknown function (DUF2784) 4 110 2.5E-37 T 11-10-2018 IPR021218 Protein of unknown function DUF2784 Tbd_1982 74e449e168f779daa244755e4991b6e1 79 SUPERFAMILY SSF64307 6 77 1.83E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_1982 74e449e168f779daa244755e4991b6e1 79 Pfam PF01206 Sulfurtransferase TusA 9 77 2.4E-23 T 11-10-2018 IPR001455 TusA-like domain Tbd_1982 74e449e168f779daa244755e4991b6e1 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 11-10-2018 IPR001455 TusA-like domain Tbd_1982 74e449e168f779daa244755e4991b6e1 79 Gene3D G3DSA:3.30.110.40 4 79 2.3E-29 T 11-10-2018 IPR036868 TusA-like domain superfamily Tbd_2415 94f7125c2ab228498f2e0ae4c2081ea7 648 SUPERFAMILY SSF52540 58 330 4.18E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_2415 94f7125c2ab228498f2e0ae4c2081ea7 648 Pfam PF00350 Dynamin family 72 285 3.0E-12 T 11-10-2018 IPR022812 Dynamin superfamily Tbd_0287 4377e7bc6d0236b729ce0c3220a28a73 277 SUPERFAMILY SSF88713 5 250 9.14E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tbd_0287 4377e7bc6d0236b729ce0c3220a28a73 277 Gene3D G3DSA:3.20.20.370 1 259 1.1E-47 T 11-10-2018 Tbd_0287 4377e7bc6d0236b729ce0c3220a28a73 277 Pfam PF01522 Polysaccharide deacetylase 36 141 7.9E-21 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tbd_0287 4377e7bc6d0236b729ce0c3220a28a73 277 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 3 273 4.1E-142 T 11-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase Tbd_0287 4377e7bc6d0236b729ce0c3220a28a73 277 Pfam PF11959 Domain of unknown function (DUF3473) 145 273 3.1E-54 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 Tbd_1498 c6f3c35f8230923c5413bdc51ccbcc3e 63 Pfam PF11127 Protein of unknown function (DUF2892) 1 62 1.5E-16 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_0888 268ba27ad7de290b209be7b6e34bee6d 129 SUPERFAMILY SSF51735 2 110 2.77E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_0888 268ba27ad7de290b209be7b6e34bee6d 129 Gene3D G3DSA:3.40.50.720 2 113 1.5E-10 T 11-10-2018 Tbd_1626 a3b6d8b7dc7d1f21c41fb5a8a5ef4838 187 SUPERFAMILY SSF75708 83 131 4.58E-5 T 11-10-2018 Tbd_0877 f08a786dac09a48eb295aff4b677c91a 215 SUPERFAMILY SSF50630 100 204 4.5E-19 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Tbd_0877 f08a786dac09a48eb295aff4b677c91a 215 Gene3D G3DSA:2.40.70.10 89 214 1.5E-31 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Tbd_0877 f08a786dac09a48eb295aff4b677c91a 215 Pfam PF13975 gag-polyprotein putative aspartyl protease 111 199 1.4E-23 T 11-10-2018 Tbd_0877 f08a786dac09a48eb295aff4b677c91a 215 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 96 212 1.3E-32 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Tbd_0877 f08a786dac09a48eb295aff4b677c91a 215 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 120 131 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Tbd_0055 0494ca2d3fd88b0eda8e82ae169ad459 193 Pfam PF11845 Protein of unknown function (DUF3365) 20 190 1.3E-25 T 11-10-2018 IPR021796 Protein of unknown function DUF3365 Tbd_1962 e047a64ce82df932b992102d2967ce9f 92 SUPERFAMILY SSF47598 1 37 7.23E-6 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Tbd_1915 71f40c569ae3d10a8acf6221d841fdf9 205 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 200 3.1E-49 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tbd_1915 71f40c569ae3d10a8acf6221d841fdf9 205 SUPERFAMILY SSF51366 4 202 9.42E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tbd_1915 71f40c569ae3d10a8acf6221d841fdf9 205 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 205 42.766 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tbd_1915 71f40c569ae3d10a8acf6221d841fdf9 205 Gene3D G3DSA:3.20.20.70 1 205 2.7E-68 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tbd_2344 5e7076a6d9c69eadec1eab0a146ba3e5 217 Pfam PF01863 Protein of unknown function DUF45 13 209 1.5E-51 T 11-10-2018 IPR002725 Protein of unknown function DUF45 Tbd_2344 5e7076a6d9c69eadec1eab0a146ba3e5 217 Gene3D G3DSA:3.30.2010.10 123 212 2.1E-15 T 11-10-2018 Tbd_0979 ee7016e178520448afcf7767db0e732b 134 Gene3D G3DSA:3.40.50.300 1 114 3.7E-5 T 11-10-2018 Tbd_0979 ee7016e178520448afcf7767db0e732b 134 SUPERFAMILY SSF52540 4 94 2.05E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0094 cee60805acb12aa0e2ae731b4c6d0303 158 SUPERFAMILY SSF47175 53 150 2.06E-8 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Tbd_0333 cbb38c2cad17a4ea2f59dfba965bc253 195 SUPERFAMILY SSF52833 62 193 2.69E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Tbd_0333 cbb38c2cad17a4ea2f59dfba965bc253 195 Gene3D G3DSA:3.40.30.10 60 187 2.9E-7 T 11-10-2018 Tbd_2733 4a946f054652ae72c0177643f0e81e64 420 SUPERFAMILY SSF103473 19 416 7.32E-37 T 11-10-2018 IPR036259 MFS transporter superfamily Tbd_2733 4a946f054652ae72c0177643f0e81e64 420 Gene3D G3DSA:1.20.1250.20 26 412 2.9E-33 T 11-10-2018 Tbd_2733 4a946f054652ae72c0177643f0e81e64 420 Pfam PF07690 Major Facilitator Superfamily 46 268 9.9E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tbd_2003 b49df2fb2430dcf51841aaad25c7db0e 95 Pfam PF14090 Helix-turn-helix domain 25 92 5.7E-25 T 11-10-2018 Tbd_0175 1e8f83db3d990cb3a8837f886e8e4d27 94 Pfam PF11342 Protein of unknown function (DUF3144) 10 85 2.2E-27 T 11-10-2018 IPR021490 Protein of unknown function DUF3144 Tbd_2776 315347bfd87f5a49869ec22942f2aeab 384 Gene3D G3DSA:2.40.160.60 24 384 1.2E-103 T 11-10-2018 Tbd_2776 315347bfd87f5a49869ec22942f2aeab 384 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 31 382 7.5E-31 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Tbd_2776 315347bfd87f5a49869ec22942f2aeab 384 SUPERFAMILY SSF56935 25 384 1.28E-60 T 11-10-2018 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 PRINTS PR01008 Flagellar L-ring protein signature 162 178 1.7E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 PRINTS PR01008 Flagellar L-ring protein signature 65 77 1.7E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 PRINTS PR01008 Flagellar L-ring protein signature 183 197 1.7E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 PRINTS PR01008 Flagellar L-ring protein signature 136 151 1.7E-20 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 24.739 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_1631 0b6c92a41ff8d712e0564664ceea5178 222 Pfam PF02107 Flagellar L-ring protein 43 221 8.1E-56 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Tbd_2539 25a0d5ce5400c2b537b1990af3a7be35 256 SUPERFAMILY SSF81345 43 238 2.48E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Tbd_2539 25a0d5ce5400c2b537b1990af3a7be35 256 Pfam PF00950 ABC 3 transport family 10 159 5.7E-7 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Tbd_2539 25a0d5ce5400c2b537b1990af3a7be35 256 Pfam PF00950 ABC 3 transport family 162 242 4.0E-8 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Tbd_2692 c3b1171b1b3c334a844f553dbedf5d5f 276 Pfam PF02673 Bacitracin resistance protein BacA 10 259 1.6E-82 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tbd_2692 c3b1171b1b3c334a844f553dbedf5d5f 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 265 17.644 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tbd_2692 c3b1171b1b3c334a844f553dbedf5d5f 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 258 1.2E-80 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tbd_1279 766fbb972127dd34386acfbae0d6e93c 329 Gene3D G3DSA:2.40.128.140 28 329 7.8E-89 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily Tbd_1279 766fbb972127dd34386acfbae0d6e93c 329 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 34 327 5.5E-104 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 Tbd_0468 be2d9256a276878a492f5416ad269a04 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 409 8.9E-83 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tbd_0468 be2d9256a276878a492f5416ad269a04 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 13 412 2.3E-105 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tbd_0468 be2d9256a276878a492f5416ad269a04 425 PIRSF PIRSF006066 1 420 8.5E-103 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tbd_0185 aabb0312621e017cb2088ea37490d7c3 379 Pfam PF01578 Cytochrome C assembly protein 170 374 1.7E-47 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Tbd_0185 aabb0312621e017cb2088ea37490d7c3 379 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 140 377 8.3E-72 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Tbd_0513 305597183828d342fe0953b43b451149 266 Pfam PF07589 PEP-CTERM motif 238 263 3.0E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1980 afe93a393ab8845d1ddafb6a3e2c76de 115 Pfam PF09842 Predicted membrane protein (DUF2069) 8 108 1.5E-35 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane Tbd_1943 11e8d89f5670976bbde122e2fc7c33ac 281 Pfam PF01226 Formate/nitrite transporter 8 257 3.3E-63 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Tbd_1943 11e8d89f5670976bbde122e2fc7c33ac 281 Gene3D G3DSA:1.20.1080.10 1 249 4.5E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Tbd_2248 3350f06692eecfab33dad58f9ce31d30 161 Gene3D G3DSA:1.20.120.520 1 150 2.1E-12 T 11-10-2018 Tbd_2248 3350f06692eecfab33dad58f9ce31d30 161 Pfam PF01814 Hemerythrin HHE cation binding domain 11 130 7.8E-14 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Tbd_0834 6bb8004ff5d619863fe5f19eba6a410d 1243 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 909 1242 2.0E-59 T 11-10-2018 IPR007452 Translocation and assembly module TamB Tbd_0301 5a49cebb523427709437eb51e3e3d631 309 Gene3D G3DSA:3.90.550.10 1 249 3.1E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0301 5a49cebb523427709437eb51e3e3d631 309 SUPERFAMILY SSF53448 3 232 2.21E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tbd_0301 5a49cebb523427709437eb51e3e3d631 309 Pfam PF00535 Glycosyl transferase family 2 6 116 3.2E-35 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tbd_1267 f64a58a0464a04bd6574f9e30657a871 177 Pfam PF13689 Domain of unknown function (DUF4154) 33 172 1.0E-40 T 11-10-2018 IPR025293 YfiR-like Tbd_2619 f4693867bc78e442254425eaa8eec126 73 SUPERFAMILY SSF47598 7 48 1.89E-6 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Tbd_0465 b97880d8ee5085c94819bb6459ad3831 291 Gene3D G3DSA:1.25.40.920 40 291 3.6E-69 T 11-10-2018 IPR038537 TatT superfamily Tbd_0465 b97880d8ee5085c94819bb6459ad3831 291 Pfam PF16811 TRAP transporter T-component 46 291 4.6E-82 T 11-10-2018 IPR031823 TRAP transporter T-component Tbd_1559 a01be0c84940cc86fe3ae3e791aaaff3 75 Gene3D G3DSA:2.30.30.400 9 74 1.1E-7 T 11-10-2018 IPR038626 Rof-like superfamily Tbd_1559 a01be0c84940cc86fe3ae3e791aaaff3 75 SUPERFAMILY SSF101744 4 70 1.31E-13 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Tbd_0605 e678c0f3ea3ee9d377f0e296536433ab 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 7 60 2.6E-17 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 Tbd_2691 13ca51b6a84c32ef799f341a79b30361 433 SUPERFAMILY SSF51695 81 426 3.4E-61 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Tbd_2691 13ca51b6a84c32ef799f341a79b30361 433 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 83 420 2.8E-17 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Tbd_2691 13ca51b6a84c32ef799f341a79b30361 433 Gene3D G3DSA:3.20.20.190 77 427 1.2E-37 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 Gene3D G3DSA:1.10.3720.10 1 253 1.2E-49 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 SUPERFAMILY SSF161098 2 246 1.01E-39 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 Gene3D G3DSA:1.10.3720.10 267 527 2.9E-27 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 SUPERFAMILY SSF161098 268 522 8.37E-33 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 252 5.0E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_0989 118ac8a47d6e5583d24106ae94c3fa21 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 330 522 1.2E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_2446 93f3fdc4eb0a61ba55066b223982322b 163 Gene3D G3DSA:3.30.450.150 30 156 1.5E-31 T 11-10-2018 IPR038084 GlcG-like domain superfamily Tbd_2446 93f3fdc4eb0a61ba55066b223982322b 163 Pfam PF03928 Haem-degrading 29 152 3.4E-22 T 11-10-2018 IPR005624 Haem-degrading Tbd_2446 93f3fdc4eb0a61ba55066b223982322b 163 SUPERFAMILY SSF143744 21 155 1.96E-29 T 11-10-2018 IPR038084 GlcG-like domain superfamily Tbd_0894 016bb9c174553ebd0105b4a1c6946cd9 143 Gene3D G3DSA:3.40.50.1010 3 138 8.4E-15 T 11-10-2018 Tbd_0894 016bb9c174553ebd0105b4a1c6946cd9 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 139 11.401 T 11-10-2018 IPR022907 VapC family GO:0004540 Tbd_0894 016bb9c174553ebd0105b4a1c6946cd9 143 SUPERFAMILY SSF88723 4 140 4.21E-18 T 11-10-2018 IPR029060 PIN-like domain superfamily Tbd_0894 016bb9c174553ebd0105b4a1c6946cd9 143 Pfam PF01850 PIN domain 4 132 3.4E-18 T 11-10-2018 IPR002716 PIN domain Tbd_1787 0bd104e9f4f8d65df1efd4f11c23a661 295 SUPERFAMILY SSF53649 33 93 1.31E-5 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tbd_1787 0bd104e9f4f8d65df1efd4f11c23a661 295 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 32 91 8.3E-6 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Tbd_1332 9da8250c987a88c17e4eae5b467ff953 114 Gene3D G3DSA:2.40.50.320 43 114 2.3E-25 T 11-10-2018 Tbd_1332 9da8250c987a88c17e4eae5b467ff953 114 Pfam PF11604 Copper binding periplasmic protein CusF 49 113 3.3E-25 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF Tbd_1233 c80b7ed951b135ea89f761b97fd64acc 419 SUPERFAMILY SSF53300 248 351 1.62E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tbd_1233 c80b7ed951b135ea89f761b97fd64acc 419 Pfam PF04285 Protein of unknown function (DUF444) 4 417 2.9E-175 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 Tbd_1233 c80b7ed951b135ea89f761b97fd64acc 419 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 419 37.003 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 Tbd_1262 32ff517cfe4690206811041a56c60b95 267 Gene3D G3DSA:3.40.50.700 11 174 1.9E-41 T 11-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Tbd_1262 32ff517cfe4690206811041a56c60b95 267 SUPERFAMILY SSF56770 12 224 8.5E-45 T 11-10-2018 Tbd_1262 32ff517cfe4690206811041a56c60b95 267 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 23 160 2.0E-25 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_2014 6e1c6d1d2ee08fae651c3fb5bda52b17 156 Gene3D G3DSA:1.10.10.10 1 146 1.5E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_2014 6e1c6d1d2ee08fae651c3fb5bda52b17 156 SUPERFAMILY SSF46785 2 132 8.44E-39 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_2014 6e1c6d1d2ee08fae651c3fb5bda52b17 156 Pfam PF02082 Transcriptional regulator 1 81 1.1E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_2014 6e1c6d1d2ee08fae651c3fb5bda52b17 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 5.0E-38 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_2475 3c7825c484c4675967bfe909d003483f 259 Pfam PF13247 4Fe-4S dicluster domain 116 215 3.5E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tbd_2475 3c7825c484c4675967bfe909d003483f 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 152 163 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tbd_2475 3c7825c484c4675967bfe909d003483f 259 Gene3D G3DSA:3.30.70.20 126 191 4.0E-48 T 11-10-2018 Tbd_2475 3c7825c484c4675967bfe909d003483f 259 Gene3D G3DSA:3.30.70.20 58 256 4.0E-48 T 11-10-2018 Tbd_2475 3c7825c484c4675967bfe909d003483f 259 SUPERFAMILY SSF54862 56 240 3.56E-47 T 11-10-2018 Tbd_1804 7a5c95bf0760b30efb73dc15e25f0c04 227 Pfam PF07589 PEP-CTERM motif 202 226 5.8E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0021 5c83b65b105b22390187ae3cea9d0377 488 PIRSF PIRSF006247 4 488 5.8E-162 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tbd_0021 5c83b65b105b22390187ae3cea9d0377 488 Pfam PF02386 Cation transport protein 42 266 1.8E-40 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tbd_0021 5c83b65b105b22390187ae3cea9d0377 488 Pfam PF02386 Cation transport protein 307 480 3.9E-22 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.9E-37 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.9E-37 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.9E-37 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.9E-37 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 3.5E-28 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_1141 b6f8b2de89ed11de9e7e2bd889fee740 114 Pfam PF03840 Preprotein translocase SecG subunit 5 73 3.3E-23 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tbd_2421 750c15e92c584b7efab1d8cf3a958cef 237 TIGRFAM TIGR04498 AbiV_defense: abortive infection protein, AbiV family 22 162 5.0E-43 T 11-10-2018 IPR030987 Abortive infection protein, AbiV family Tbd_2574 484446706c40810b193fc95a0aacb2bf 185 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 185 3.7E-63 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Tbd_2574 484446706c40810b193fc95a0aacb2bf 185 SUPERFAMILY SSF53474 2 185 7.05E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2574 484446706c40810b193fc95a0aacb2bf 185 Gene3D G3DSA:3.40.50.1820 1 185 1.9E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Tbd_2136 9cc60cea8b9d67a6e9c8f96fca561145 143 Pfam PF13474 SnoaL-like domain 12 126 3.1E-19 T 11-10-2018 IPR037401 SnoaL-like domain Tbd_2136 9cc60cea8b9d67a6e9c8f96fca561145 143 Gene3D G3DSA:3.10.450.50 1 143 2.7E-50 T 11-10-2018 Tbd_2136 9cc60cea8b9d67a6e9c8f96fca561145 143 SUPERFAMILY SSF54427 6 127 7.91E-32 T 11-10-2018 IPR032710 NTF2-like domain superfamily Tbd_1929 59dcbebb13d37f9e994bfea0dccfda96 273 Gene3D G3DSA:1.10.3210.10 14 264 1.8E-24 T 11-10-2018 Tbd_1929 59dcbebb13d37f9e994bfea0dccfda96 273 SUPERFAMILY SSF109604 14 267 4.71E-32 T 11-10-2018 Tbd_1929 59dcbebb13d37f9e994bfea0dccfda96 273 Pfam PF08668 HDOD domain 21 213 2.7E-14 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Tbd_2045 5b4e2f6ebb46da136efc04461d002790 67 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 8.9E-20 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Tbd_2045 5b4e2f6ebb46da136efc04461d002790 67 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.6E-20 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Tbd_1027 d5b1aeee66d4513e9fd1fe3fa289bf5e 151 SUPERFAMILY SSF54690 3 148 3.53E-52 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Tbd_1027 d5b1aeee66d4513e9fd1fe3fa289bf5e 151 Gene3D G3DSA:3.90.1170.40 1 148 7.9E-52 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Tbd_1027 d5b1aeee66d4513e9fd1fe3fa289bf5e 151 Pfam PF02391 MoaE protein 6 119 1.1E-35 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Tbd_2747 bb1d8c5ac3f1cf3cef131e93e00543fe 105 SUPERFAMILY SSF54637 9 96 3.89E-14 T 11-10-2018 IPR029069 HotDog domain superfamily Tbd_2747 bb1d8c5ac3f1cf3cef131e93e00543fe 105 Gene3D G3DSA:3.10.129.10 1 102 6.5E-20 T 11-10-2018 Tbd_2747 bb1d8c5ac3f1cf3cef131e93e00543fe 105 Pfam PF07977 FabA-like domain 9 70 8.8E-7 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tbd_1853 f039be57659dfc11e5aaa2784604d0c3 106 Gene3D G3DSA:3.30.70.2340 13 106 1.1E-31 T 11-10-2018 Tbd_1853 f039be57659dfc11e5aaa2784604d0c3 106 Pfam PF12112 Protein of unknown function (DUF3579) 22 104 7.0E-33 T 11-10-2018 IPR021969 Protein of unknown function DUF3579 Tbd_0506 bf6870ddfe055c06cfa0c9916334faaf 203 Pfam PF07589 PEP-CTERM motif 177 201 1.3E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0336 3009f2a43f0177f3c422b8e52b333fbd 154 Pfam PF02082 Transcriptional regulator 1 80 8.1E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_0336 3009f2a43f0177f3c422b8e52b333fbd 154 SUPERFAMILY SSF46785 3 133 1.93E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tbd_0336 3009f2a43f0177f3c422b8e52b333fbd 154 Gene3D G3DSA:1.10.10.10 1 140 4.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tbd_0336 3009f2a43f0177f3c422b8e52b333fbd 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 6.2E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Tbd_0220 ccf5b763d46814ff0f979ee7dc0d6115 311 Pfam PF05661 Protein of unknown function (DUF808) 4 297 5.9E-117 T 11-10-2018 IPR008526 Inner membrane protein YedI Tbd_0220 ccf5b763d46814ff0f979ee7dc0d6115 311 PIRSF PIRSF016660 1 310 2.6E-124 T 11-10-2018 IPR008526 Inner membrane protein YedI Tbd_1869 d6d0a3f037a96f8dd31a464b352fbf15 355 Pfam PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term 165 254 1.8E-7 T 11-10-2018 IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 Tbd_1869 d6d0a3f037a96f8dd31a464b352fbf15 355 Gene3D G3DSA:3.40.50.11660 131 290 8.0E-18 T 11-10-2018 IPR038577 GT10-like superfamily Tbd_1869 d6d0a3f037a96f8dd31a464b352fbf15 355 SUPERFAMILY SSF53756 21 295 1.95E-41 T 11-10-2018 Tbd_1715 51471cae7d98a50d739ec20736cf7363 102 Pfam PF09413 Putative prokaryotic signal transducing protein 3 67 2.7E-9 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 Tbd_0238 dbf440b37feb4d4134f41fae53276c54 87 Pfam PF04380 Membrane fusogenic activity 7 79 5.9E-26 T 11-10-2018 IPR007475 Membrane fusogenic activity Tbd_2154 40bf83938426e28327e637dd6a2ee936 104 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 3.5E-31 T 11-10-2018 IPR018741 Protein of unknown function DUF2288 Tbd_1138 7462fb9b80e6069eac4b08b9594ed814 281 Gene3D G3DSA:1.10.3720.10 62 279 5.2E-29 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_1138 7462fb9b80e6069eac4b08b9594ed814 281 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 13 278 5.3E-84 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Tbd_1138 7462fb9b80e6069eac4b08b9594ed814 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 281 1.5E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tbd_1138 7462fb9b80e6069eac4b08b9594ed814 281 SUPERFAMILY SSF161098 27 269 1.4E-34 T 11-10-2018 IPR035906 MetI-like superfamily Tbd_0627 3fd9a90db44246cd702f84612f307092 295 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 74 283 2.2E-8 T 11-10-2018 Tbd_1805 c641b3dffc3403ef28f17c9b3c8262b2 228 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 197 223 1.0E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_0992 c5227b8c31838b92eed125768b6240c5 170 Gene3D G3DSA:3.90.1720.10 32 161 5.5E-37 T 11-10-2018 Tbd_0992 c5227b8c31838b92eed125768b6240c5 170 SUPERFAMILY SSF54001 29 156 3.2E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Tbd_0992 c5227b8c31838b92eed125768b6240c5 170 Pfam PF00877 NlpC/P60 family 47 155 6.3E-25 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Tbd_2361 ce1eedca9a5fb8f7cc47a4df9c4673bb 345 SUPERFAMILY SSF51735 1 290 1.37E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Tbd_2361 ce1eedca9a5fb8f7cc47a4df9c4673bb 345 Gene3D G3DSA:3.40.50.720 5 329 8.1E-56 T 11-10-2018 Tbd_2361 ce1eedca9a5fb8f7cc47a4df9c4673bb 345 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 234 3.7E-22 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tbd_1737 9c0f10b84828da81bb9b4bfd552a3c41 553 Gene3D G3DSA:3.50.50.60 85 300 8.1E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1737 9c0f10b84828da81bb9b4bfd552a3c41 553 Gene3D G3DSA:3.50.50.60 470 537 4.1E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1737 9c0f10b84828da81bb9b4bfd552a3c41 553 SUPERFAMILY SSF51905 100 533 1.44E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tbd_1737 9c0f10b84828da81bb9b4bfd552a3c41 553 PIRSF PIRSF038984 1 539 2.7E-248 T 11-10-2018 IPR028348 FAD dependent protein Tbd_1737 9c0f10b84828da81bb9b4bfd552a3c41 553 Gene3D G3DSA:3.30.70.2700 1 80 6.1E-26 T 11-10-2018 Tbd_0508 e33fbfba1fa4f0040df85d3b7a6d260a 192 Gene3D G3DSA:3.40.50.360 1 190 9.9E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_0508 e33fbfba1fa4f0040df85d3b7a6d260a 192 SUPERFAMILY SSF52218 2 164 1.8E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Tbd_0508 e33fbfba1fa4f0040df85d3b7a6d260a 192 Pfam PF03358 NADPH-dependent FMN reductase 2 155 2.1E-40 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tbd_1499 b47b6c7a3f802670673bbbc9f4886b77 68 Pfam PF11127 Protein of unknown function (DUF2892) 1 68 6.7E-21 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_0535 1533adefb9bcd336b55daeaf71217935 177 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 23 167 4.6E-46 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Tbd_0535 1533adefb9bcd336b55daeaf71217935 177 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 26.192 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Tbd_0535 1533adefb9bcd336b55daeaf71217935 177 Pfam PF03968 OstA-like protein 34 143 6.4E-30 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Tbd_0535 1533adefb9bcd336b55daeaf71217935 177 Gene3D G3DSA:2.60.450.10 25 170 6.6E-46 T 11-10-2018 Tbd_0363 11e157bb3d81f74fe408fa04949d9a4c 80 Pfam PF06803 Protein of unknown function (DUF1232) 60 75 1.4E-4 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Tbd_0740 401057e3fff48c187fc310c22968cbfd 442 Gene3D G3DSA:3.40.50.2000 197 387 4.8E-122 T 11-10-2018 Tbd_0740 401057e3fff48c187fc310c22968cbfd 442 Pfam PF00534 Glycosyl transferases group 1 210 384 1.5E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Tbd_0740 401057e3fff48c187fc310c22968cbfd 442 Pfam PF13439 Glycosyltransferase Family 4 24 197 5.1E-31 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tbd_0740 401057e3fff48c187fc310c22968cbfd 442 SUPERFAMILY SSF53756 22 407 2.27E-90 T 11-10-2018 Tbd_0740 401057e3fff48c187fc310c22968cbfd 442 Gene3D G3DSA:3.40.50.2000 7 404 4.8E-122 T 11-10-2018 Tbd_0275 302a2fee862ab8ddc356722f1c5bd6b7 263 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 233 255 1.6E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1412 b062d1a3befbcb997e80e18f38601d24 400 Pfam PF02687 FtsX-like permease family 306 390 1.0E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tbd_1412 b062d1a3befbcb997e80e18f38601d24 400 Pfam PF12704 MacB-like periplasmic core domain 20 238 3.1E-43 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Tbd_0017 ddd5821db223959470a980c1b7b1d151 200 Pfam PF14334 Domain of unknown function (DUF4390) 25 177 1.1E-49 T 11-10-2018 IPR025500 Protein of unknown function DUF4390 Tbd_1535 8681e16dbb7e5c2d3baa84e08e5359a4 234 Pfam PF09335 SNARE associated Golgi protein 64 180 1.5E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein Tbd_1107 ac21e4f2e9b0163c9099c55eca23bf84 442 SUPERFAMILY SSF54862 32 96 1.48E-5 T 11-10-2018 Tbd_1107 ac21e4f2e9b0163c9099c55eca23bf84 442 Pfam PF02754 Cysteine-rich domain 204 287 1.9E-7 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_1107 ac21e4f2e9b0163c9099c55eca23bf84 442 Pfam PF02754 Cysteine-rich domain 336 411 7.5E-5 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_2613 2d5cfacb56811a0c10b208b184650c6d 361 Pfam PF01925 Sulfite exporter TauE/SafE 17 289 3.4E-33 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tbd_1082 3323901981a8ea0b89989866373815d4 378 Pfam PF12698 ABC-2 family transporter protein 27 370 6.1E-47 T 11-10-2018 Tbd_1179 daa4cd2923caa690d29bd4cb11eba029 223 Gene3D G3DSA:3.40.50.300 29 170 2.2E-8 T 11-10-2018 Tbd_2196 7c9702de91c01a5d9acce1339d2f8ebb 296 Pfam PF13280 WYL domain 129 211 1.5E-13 T 11-10-2018 IPR026881 WYL domain Tbd_2196 7c9702de91c01a5d9acce1339d2f8ebb 296 PIRSF PIRSF015558 3 292 1.0E-63 T 11-10-2018 IPR016634 WYL domain protein, s026 type Tbd_0582 9d1985b3e7689f6e55491e8da7df72db 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 2.1E-67 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Tbd_0582 9d1985b3e7689f6e55491e8da7df72db 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 352 1.3E-118 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Tbd_0756 5fa90ca10a50ec5ea779ba38ef6930b0 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0756 5fa90ca10a50ec5ea779ba38ef6930b0 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tbd_0082 592da569c47391403a2a3fb99b262fa0 318 Pfam PF03547 Membrane transport protein 201 309 5.2E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Tbd_0082 592da569c47391403a2a3fb99b262fa0 318 Pfam PF03547 Membrane transport protein 42 153 1.5E-9 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Tbd_0082 592da569c47391403a2a3fb99b262fa0 318 Gene3D G3DSA:1.20.1530.20 169 317 6.8E-6 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Tbd_1687 5debf56f0dba982787c74bc7e0d68f4a 784 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 151 567 1.2E-121 T 11-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Tbd_1687 5debf56f0dba982787c74bc7e0d68f4a 784 SUPERFAMILY SSF52540 159 575 1.36E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_1687 5debf56f0dba982787c74bc7e0d68f4a 784 Gene3D G3DSA:1.10.8.80 236 354 8.5E-60 T 11-10-2018 Tbd_1687 5debf56f0dba982787c74bc7e0d68f4a 784 Gene3D G3DSA:3.40.50.300 155 542 8.5E-60 T 11-10-2018 Tbd_0372 7c314d161e10f38cf8eeca5ea578efd7 189 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 37 139 1.6E-17 T 11-10-2018 IPR011979 Conserved hypothetical protein CHP02293 Tbd_1580 b92dc7b33bc84ca911177cf118cb33a5 214 Gene3D G3DSA:3.30.1310.20 56 114 5.5E-19 T 11-10-2018 Tbd_1580 b92dc7b33bc84ca911177cf118cb33a5 214 SUPERFAMILY SSF53271 1 208 5.9E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Tbd_1580 b92dc7b33bc84ca911177cf118cb33a5 214 Pfam PF00156 Phosphoribosyl transferase domain 3 194 5.6E-42 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tbd_1657 054a928b27ca899c6ff4725748054381 411 PIRSF PIRSF033563 1 411 7.5E-126 T 11-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Tbd_1657 054a928b27ca899c6ff4725748054381 411 Pfam PF06245 Protein of unknown function (DUF1015) 4 408 9.6E-129 T 11-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Tbd_1444 c704d942adb30d65265c7572a5685e30 127 Pfam PF11154 Protein of unknown function (DUF2934) 27 61 8.3E-14 T 11-10-2018 IPR021327 Protein of unknown function DUF2934 Tbd_0087 5777c91a7144813bdc0d57fea6cd8067 88 Pfam PF13937 Domain of unknown function (DUF4212) 10 86 2.9E-35 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted Tbd_0087 5777c91a7144813bdc0d57fea6cd8067 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 4.9E-36 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted Tbd_0329 3a21667ff3d28e84c7066826c2501a20 65 Pfam PF11174 Protein of unknown function (DUF2970) 10 61 2.2E-20 T 11-10-2018 IPR021344 Protein of unknown function DUF2970 Tbd_2181 c93aaf69ee849fb2b9f3ffde44f5e10b 197 Gene3D G3DSA:1.20.120.10 75 183 1.5E-5 T 11-10-2018 Tbd_2181 c93aaf69ee849fb2b9f3ffde44f5e10b 197 SUPERFAMILY SSF47175 78 182 1.31E-11 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Tbd_2356 0f29364217a3fbb1c5f01070d39cf89d 190 Pfam PF05433 Glycine zipper 2TM domain 72 111 8.6E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Tbd_0985 8983085309ad346bbee9a825e8dc650f 343 SUPERFAMILY SSF54197 161 231 2.55E-5 T 11-10-2018 IPR036265 HIT-like superfamily Tbd_2628 d0ca1b7f634a896d0080dc7387e19a93 72 Pfam PF11127 Protein of unknown function (DUF2892) 1 66 2.8E-20 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 Tbd_0705 7a866b232f9ec1b086bcf752343a8c8f 70 Gene3D G3DSA:1.10.10.1100 1 58 9.8E-21 T 11-10-2018 Tbd_0705 7a866b232f9ec1b086bcf752343a8c8f 70 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 1.3E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Tbd_1924 f352365bfea8e45082dddd422553ef0b 147 PIRSF PIRSF016789 17 138 3.4E-38 T 11-10-2018 IPR007401 Protein of unknown function DUF454 Tbd_1924 f352365bfea8e45082dddd422553ef0b 147 Pfam PF04304 Protein of unknown function (DUF454) 18 132 2.4E-36 T 11-10-2018 IPR007401 Protein of unknown function DUF454 Tbd_2175 97a3d18ff13597b005df924a61edb625 84 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 15 82 2.0E-26 T 11-10-2018 IPR018720 Domain of unknown function DUF2249 Tbd_0352 462abc377503808b497e1abf53ff5ca0 285 Pfam PF07589 PEP-CTERM motif 259 283 2.2E-6 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1409 9fa51e18f1a0fac40bc2eb7f5e59f034 424 Pfam PF05940 NnrS protein 47 418 9.8E-117 T 11-10-2018 IPR010266 NnrS Tbd_2186 4a9c6d66b06d6123e94335931d4539ca 333 Pfam PF01136 Peptidase family U32 79 332 1.5E-66 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tbd_2070 a2082a2e3a7e50161ca96b767b1c721c 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 35 67 6.1E-6 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Tbd_2070 a2082a2e3a7e50161ca96b767b1c721c 74 SUPERFAMILY SSF46955 24 68 1.28E-5 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_1970 ac3f4e47ac2304616fbce643f5bdee82 201 Gene3D G3DSA:1.20.120.80 22 201 2.0E-36 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_1970 ac3f4e47ac2304616fbce643f5bdee82 201 SUPERFAMILY SSF81452 12 200 2.35E-40 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tbd_2252 3216c6f0528108c8c1a732533a1c1119 233 Pfam PF07589 PEP-CTERM motif 202 226 4.7E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1204 488c22fb65d7347f5235a876ebe147fc 145 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 137 8.9E-6 T 11-10-2018 IPR028973 PhnB-like Tbd_1204 488c22fb65d7347f5235a876ebe147fc 145 Gene3D G3DSA:3.10.180.10 8 145 1.8E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_1204 488c22fb65d7347f5235a876ebe147fc 145 SUPERFAMILY SSF54593 1 141 4.97E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_1811 ae9599c3a6e180e5b9b2592a7bd693ba 308 Pfam PF16280 Domain of unknown function (DUF4928) 23 305 3.9E-59 T 11-10-2018 IPR032564 Protein of unknown function DUF4928 Tbd_2217 301b49ee324656a3f83143daaae674cb 394 Pfam PF05816 Toxic anion resistance protein (TelA) 63 378 1.4E-60 T 11-10-2018 IPR008863 Toxic anion resistance Tbd_1993 3082e0ad67f7dbfa43ebae2f70d4272e 112 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 3 110 1.4E-35 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1993 3082e0ad67f7dbfa43ebae2f70d4272e 112 PIRSF PIRSF006821 1 112 3.8E-20 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_0054 82c656f14f19aaa67157903b57f57d4b 220 Pfam PF04367 Protein of unknown function (DUF502) 73 178 1.1E-21 T 11-10-2018 IPR007462 Protein of unknown function DUF502 Tbd_1049 5520f9dc54c488f2c8fb022912e3b0b8 178 Gene3D G3DSA:3.10.180.70 13 178 2.5E-62 T 11-10-2018 Tbd_1049 5520f9dc54c488f2c8fb022912e3b0b8 178 SUPERFAMILY SSF54593 17 174 4.27E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Tbd_1049 5520f9dc54c488f2c8fb022912e3b0b8 178 PIRSF PIRSF021700 13 176 9.7E-59 T 11-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase Tbd_1049 5520f9dc54c488f2c8fb022912e3b0b8 178 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 16 136 3.9E-46 T 11-10-2018 IPR028973 PhnB-like Tbd_2749 78234cd0ef4312329a9313400f5d8176 194 SUPERFAMILY SSF89392 29 188 3.14E-11 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Tbd_2749 78234cd0ef4312329a9313400f5d8176 194 Gene3D G3DSA:2.50.20.10 29 192 6.9E-16 T 11-10-2018 Tbd_2663 c21d3994e08afe4ae43a8f61449aede7 145 Pfam PF02643 Uncharacterized ACR, COG1430 39 140 5.7E-32 T 11-10-2018 IPR003795 Protein of unknown function DUF192 Tbd_2663 c21d3994e08afe4ae43a8f61449aede7 145 Gene3D G3DSA:2.60.120.1140 21 141 2.3E-39 T 11-10-2018 IPR038695 Saro_0823-like superfamily Tbd_2502 1f274a8a3c1e5fdaaca098ec9d3c9575 154 Pfam PF13511 Domain of unknown function (DUF4124) 8 58 1.1E-11 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 Tbd_2412 10a5df1ce9ba529507837f92fc3fcd42 138 Pfam PF03610 PTS system fructose IIA component 3 116 2.2E-22 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Tbd_2412 10a5df1ce9ba529507837f92fc3fcd42 138 SUPERFAMILY SSF53062 1 130 1.1E-33 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Tbd_2412 10a5df1ce9ba529507837f92fc3fcd42 138 Gene3D G3DSA:3.40.50.510 1 137 6.2E-38 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Tbd_1934 091faf10fc6869d5d1be23cffc2e1d6b 154 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 153 1.7E-61 T 11-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane Tbd_2000 5987da8336ad447a898c8c11abff16fe 211 Pfam PF07589 PEP-CTERM motif 179 204 5.9E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Tbd_1645 2b406cc25f334c1eddc3b8e22159b15a 303 Pfam PF02754 Cysteine-rich domain 6 88 7.9E-7 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_1645 2b406cc25f334c1eddc3b8e22159b15a 303 Pfam PF02754 Cysteine-rich domain 157 244 2.2E-9 T 11-10-2018 IPR004017 Cysteine-rich domain Tbd_2700 f30f228557625f1538f93c3808c0b7c3 224 Pfam PF04519 Polymer-forming cytoskeletal 72 167 8.9E-17 T 11-10-2018 IPR007607 Bactofilin A/B Tbd_2163 13f02a328d8974e1324d0403d83d7765 207 SUPERFAMILY SSF47240 42 121 4.4E-16 T 11-10-2018 IPR009078 Ferritin-like superfamily Tbd_2163 13f02a328d8974e1324d0403d83d7765 207 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 207 31.322 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Tbd_2163 13f02a328d8974e1324d0403d83d7765 207 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 46 204 4.8E-42 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Tbd_2778 ebcb3544fcfc8f7d67e9fcd47c36d21f 184 Pfam PF05433 Glycine zipper 2TM domain 68 109 1.4E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 8 472 18.649 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 472 2.9E-146 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 Pfam PF00361 Proton-conducting membrane transporter 127 418 8.1E-73 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 1.3E-9 T 11-10-2018 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 1.3E-9 T 11-10-2018 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 1.3E-9 T 11-10-2018 Tbd_1155 f9f7a3ac1516a32065b265db42571269 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 1.3E-9 T 11-10-2018 Tbd_1994 cd786d81d597cc899cd33e4547ede4ff 134 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 4 107 4.6E-38 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1044 43d89336d27c050fb4976bfdf3164f9a 305 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 305 67.847 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tbd_1044 43d89336d27c050fb4976bfdf3164f9a 305 Pfam PF03186 CobD/Cbib protein 7 283 8.7E-39 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tbd_1158 4862d26a2b29a519fc9ce1fa477c77e6 89 Gene3D G3DSA:3.30.1490.340 1 89 4.7E-11 T 11-10-2018 Tbd_1461 b7198f7e500b9ba35a75222b47b2e277 108 PIRSF PIRSF006821 1 108 2.5E-17 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1461 b7198f7e500b9ba35a75222b47b2e277 108 Pfam PF09941 Uncharacterized conserved protein (DUF2173) 4 106 6.3E-33 T 11-10-2018 IPR018685 Protein of unknown function DUF2173 Tbd_1056 4ba0369e113d0ec96640e1273e19f1a6 130 Pfam PF07681 DoxX 10 89 7.7E-15 T 11-10-2018 IPR032808 DoxX family Tbd_1219 64bf1a08f64aa14874e67418e5e9dedc 258 Pfam PF01435 Peptidase family M48 65 244 1.7E-31 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tbd_1785 b130b58e8af9192ff864d3ed8cee6ddf 513 Pfam PF01943 Polysaccharide biosynthesis protein 19 286 1.8E-6 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Tbd_0172 d02b3c9cd87c4b48f538f4777731d81e 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 23 123 3.4E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Tbd_0172 d02b3c9cd87c4b48f538f4777731d81e 125 Gene3D G3DSA:1.10.3830.10 9 125 2.5E-37 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Tbd_1573 8d5b428abbdb24b41efadfe744dee47e 63 SUPERFAMILY SSF46955 7 57 2.38E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Tbd_1573 8d5b428abbdb24b41efadfe744dee47e 63 Pfam PF12728 Helix-turn-helix domain 8 56 1.5E-11 T 11-10-2018 Tbd_2022 0b1517c6cdf99d6ef5500b8a0e36d896 144 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 3.2E-59 T 11-10-2018 IPR014993 Protein of unknown function DUF1841 Tbd_1119 60bfb290faa17a1154c8e5974f6ec2f7 168 Pfam PF08750 CNP1-like family 31 164 3.4E-49 T 11-10-2018 IPR014861 Uncharacterised domain CNP1 Tbd_0441 8ee47ee390d7544e7b6955eba18f3229 211 Pfam PF04367 Protein of unknown function (DUF502) 68 171 7.9E-33 T 11-10-2018 IPR007462 Protein of unknown function DUF502 Tbd_0712 90e68906004bfc9e2be6f1f291e0870a 250 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 213 1.6E-36 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_1325 6080f5965c02ac9e29db106ef0b903ba 288 Pfam PF05275 Copper resistance protein B precursor (CopB) 83 288 8.0E-93 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 Tbd_2735 9bf79dc7e7f6cdfa0459c0d47879bb76 266 Pfam PF01925 Sulfite exporter TauE/SafE 7 256 2.9E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tbd_2511 7f4b280648d7d73bbdc74526dbb379dd 127 Gene3D G3DSA:3.30.1490.340 1 88 6.4E-9 T 11-10-2018 Tbd_2592 471770dafbb1a8dd4f1eec25c5ac232c 146 PIRSF PIRSF015875 1 146 3.1E-41 T 11-10-2018 IPR007418 Protein of unknown function DUF474 Tbd_0243 3d81cd4ca5dd451fa0d20102ba42a966 129 Gene3D G3DSA:1.20.1270.390 30 128 1.5E-24 T 11-10-2018 Tbd_0243 3d81cd4ca5dd451fa0d20102ba42a966 129 Pfam PF14346 Domain of unknown function (DUF4398) 23 121 9.8E-24 T 11-10-2018 IPR025511 Domain of unknown function DUF4398 Tbd_0781 39574cf46162058cea2e4a0069f29307 128 Pfam PF07309 Flagellar protein FlaF 22 120 3.9E-12 T 11-10-2018 IPR010845 Flagellar FlaF GO:0044781 Tbd_1130 d91e4754602b5f39810fb0e3a5cd9cda 152 Pfam PF13664 Domain of unknown function (DUF4149) 12 109 4.6E-22 T 11-10-2018 IPR025423 Domain of unknown function DUF4149 Tbd_0130 d007ca1cefc03c771ccd1524da133219 143 Pfam PF05258 Protein of unknown function (DUF721) 6 82 2.5E-14 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Tbd_1534 0f721f7458107a510d0236f0795393c3 532 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 67 217 6.1E-15 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Tbd_2201 b0cbdf661954d9e361de0aca48659001 420 Pfam PF04143 Sulphur transport 30 378 3.7E-55 T 11-10-2018 IPR007272 Sulphur transport domain Tbd_2673 c54ca631b20c57be9b2756739373afad 268 Pfam PF01925 Sulfite exporter TauE/SafE 14 264 1.4E-56 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tbd_1740 00402a9197aa14ab2554db28b0afed39 361 Pfam PF03916 Polysulphide reductase, NrfD 9 310 6.7E-29 T 11-10-2018 IPR005614 NrfD family Tbd_1510 33f2fa40a5857697fd1dd621fc9c8023 201 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 4.8E-36 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tbd_1455 e710b475e462bc1a0267f9ae969fbfeb 235 Pfam PF05013 N-formylglutamate amidohydrolase 9 212 6.5E-28 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase Tbd_1455 e710b475e462bc1a0267f9ae969fbfeb 235 Gene3D G3DSA:3.40.630.40 2 235 4.6E-69 T 11-10-2018 Tbd_1455 e710b475e462bc1a0267f9ae969fbfeb 235 SUPERFAMILY SSF53187 4 233 1.29E-51 T 11-10-2018 Tbd_2566 008f44fe540ae062c00c50f0644d9e3c 343 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 27 339 2.5E-52 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX Tbd_0447 f414035ac7edefa7eb7ac848bee58320 282 Pfam PF04228 Putative neutral zinc metallopeptidase 1 277 8.8E-119 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Tbd_2822 2f6885bd989f8910d16960a80cc50d7f 98 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 30 88 2.4E-19 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Tbd_0245 ef5e3ef3defc6e20e6bbbfe5d5c6cdcd 283 SUPERFAMILY SSF52540 14 197 1.74E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tbd_0934 2cac510cdb81d4d6a7f08ce93486b742 587 Pfam PF10592 AIPR protein 243 531 2.4E-51 T 11-10-2018 IPR018891 Abortive bacteriophage infection, resistance Tbd_0572 ac970e97f5149b4566fc07e7dd705c16 312 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 9.8E-43 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Tbd_0450 5804eec927010991080eb07916302ec7 65 Pfam PF10049 Protein of unknown function (DUF2283) 2 49 1.9E-17 T 11-10-2018 IPR019270 Protein of unknown function DUF2283 Tbd_2496 d15acc309b90fc9544c5dcce3e4ee7a4 96 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 21 94 6.2E-22 T 11-10-2018 IPR027599 PqqD family protein, HPr-rel-A system Tbd_0367 a606420f78200fd9460c5b5f7c360248 640 Gene3D G3DSA:1.20.58.220 418 634 6.5E-20 T 11-10-2018 IPR038078 PhoU-like domain superfamily Tbd_0922 5988d6d12e0151de6ffc887aabb157a7 427 Pfam PF02308 MgtC family 19 138 8.9E-20 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tbd_0922 5988d6d12e0151de6ffc887aabb157a7 427 Pfam PF13194 Domain of unknown function (DUF4010) 187 396 7.9E-60 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 Tbd_1518 ae6e12aadc054535b4d3993b8201bd6f 179 Gene3D G3DSA:1.20.120.520 3 172 6.0E-41 T 11-10-2018 Tbd_1518 ae6e12aadc054535b4d3993b8201bd6f 179 Pfam PF01814 Hemerythrin HHE cation binding domain 16 151 2.1E-15 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Tbd_1038 a16a5e42235704ca38ffe23a7a0f5e04 249 Pfam PF01925 Sulfite exporter TauE/SafE 7 246 7.0E-37 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tbd_1108 5459fcb59f5e6ffbb743c158afde15f6 194 Pfam PF12007 Protein of unknown function (DUF3501) 3 193 7.5E-73 T 11-10-2018 IPR021890 Protein of unknown function DUF3501 Tbd_0225 467f267363a121da9aac88c587e75530 238 PRINTS PR00624 Histone H5 signature 9 30 3.7E-9 T 11-10-2018 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 Tbd_0225 467f267363a121da9aac88c587e75530 238 PRINTS PR00624 Histone H5 signature 168 187 3.7E-9 T 11-10-2018 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 Tbd_0225 467f267363a121da9aac88c587e75530 238 PRINTS PR00624 Histone H5 signature 116 130 3.7E-9 T 11-10-2018 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 Tbd_0225 467f267363a121da9aac88c587e75530 238 PRINTS PR00624 Histone H5 signature 146 163 3.7E-9 T 11-10-2018 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 Tbd_1594 7278a57cd45854e4cc8bb02fc5f68a31 109 Pfam PF05400 Flagellar protein FliT 20 104 7.1E-25 T 11-10-2018 IPR008622 Flagellar protein FliT Tbd_1594 7278a57cd45854e4cc8bb02fc5f68a31 109 Gene3D G3DSA:1.20.58.380 4 91 4.1E-24 T 11-10-2018 Tbd_0147 f2c8ac7b87f98bcfd3f8d285f48c00f4 132 Pfam PF06155 Protein of unknown function (DUF971) 9 93 1.8E-28 T 11-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Tbd_0147 f2c8ac7b87f98bcfd3f8d285f48c00f4 132 Gene3D G3DSA:3.30.2020.30 2 97 4.3E-28 T 11-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Tbd_1765 2a57d0078dbb1c28ea43554ca61e4e14 261 Pfam PF02535 ZIP Zinc transporter 89 253 5.1E-28 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tbd_0870 06acb28912a4850710badf0a87134d8e 146 Pfam PF13511 Domain of unknown function (DUF4124) 11 65 1.2E-11 T 11-10-2018 IPR025392 Domain of unknown function DUF4124 Tbd_1466 a51c76787ca896acdca42e322e8a2732 345 SUPERFAMILY SSF56112 24 323 1.14E-13 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Tbd_2099 81f071115753e654cc2f3013534042a6 91 Pfam PF16290 Domain of unknown function (DUF4936) 6 90 1.7E-28 T 11-10-2018 IPR032556 Protein of unknown function DUF4936 Tbd_0252 fae1fd7fbe3cab20792d191286336b55 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 213 8.4E-59 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Tbd_1427 d1cb1f47ed9ab944715e2a52e5f3436f 322 Pfam PF03773 Predicted permease 22 315 2.0E-64 T 11-10-2018 IPR005524 Predicted permease DUF318 Tbd_1888 060111cc41bf3ad1643742ba6a366571 415 Pfam PF04932 O-Antigen ligase 191 344 3.2E-17 T 11-10-2018 IPR007016 O-antigen ligase-related Tbd_2474 79f3e5cff8769be90e75409b786e63e3 400 Pfam PF03916 Polysulphide reductase, NrfD 44 332 1.1E-49 T 11-10-2018 IPR005614 NrfD family Tbd_1476 320a8cd9330faff691ba986ef2344cbf 374 Pfam PF04230 Polysaccharide pyruvyl transferase 20 304 3.2E-40 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tbd_0489 1259712a942329983cd0b88a2dee382c 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 215 6.1E-42 T 11-10-2018 IPR006214 Bax inhibitor 1-related Tbd_0930 146533eced3125bc7de394e5e6bae5e8 325 Pfam PF07042 TrfA protein 42 267 1.3E-21 T 11-10-2018 IPR010751 Plasmid replication initiator protein TrfA Tbd_0331 df94509a96d2d90821db6b3b668195c6 82 Pfam PF11137 Protein of unknown function (DUF2909) 17 76 7.6E-20 T 11-10-2018 IPR021313 Protein of unknown function DUF2909 Tbd_0816 58c2829b5855fb3ac17fe3e749780ee9 261 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 129 241 1.6E-27 T 11-10-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain Tbd_0736 cb4d76d7498a993e8cb6f6976834e474 224 Pfam PF14063 Protein of unknown function (DUF4254) 49 191 2.2E-54 T 11-10-2018 IPR025350 Protein of unknown function DUF4254 Tbd_2081 1f63ce9137f06e631f53f05d13baacd3 202 Pfam PF09335 SNARE associated Golgi protein 34 160 4.3E-21 T 11-10-2018 IPR032816 SNARE associated Golgi protein Tbd_1514 5316c3356b391f3944518d3e3f8893e1 188 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 93 184 3.8E-15 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related