locus-tag class description BMG03_00005 PF00308 Bacterial dnaA protein BMG03_00005 PF08299 Bacterial dnaA protein helix-turn-helix BMG03_00005 PF11638 DnaA N-terminal domain BMG03_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BMG03_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BMG03_00010 PF02767 DNA polymerase III beta subunit, central domain BMG03_00015 PF02463 RecF/RecN/SMC N terminal domain BMG03_00030 PF00204 DNA gyrase B BMG03_00030 PF00986 DNA gyrase B subunit, carboxyl terminus BMG03_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_00030 PF01751 Toprim domain BMG03_00035 PF13276 HTH-like domain BMG03_00035 PF13683 Integrase core domain BMG03_00040 PF01527 Transposase BMG03_00045 PF02733 Dak1 domain BMG03_00045 PF02734 DAK2 domain BMG03_00055 PF00456 Transketolase, thiamine diphosphate binding domain BMG03_00060 PF02779 Transketolase, pyrimidine binding domain BMG03_00060 PF02780 Transketolase, C-terminal domain BMG03_00070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BMG03_00070 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_00080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_00085 PF03466 LysR substrate binding domain BMG03_00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_00090 PF08220 DeoR-like helix-turn-helix domain BMG03_00090 PF00455 DeoR C terminal sensor domain BMG03_00095 PF04198 Putative sugar-binding domain BMG03_00100 PF01261 Xylose isomerase-like TIM barrel BMG03_00105 PF01266 FAD dependent oxidoreductase BMG03_00105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BMG03_00110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_00110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_00120 PF00005 ABC transporter BMG03_00125 PF02653 Branched-chain amino acid transport system / permease component BMG03_00130 PF13407 Periplasmic binding protein domain BMG03_00135 PF01116 Fructose-bisphosphate aldolase class-II BMG03_00140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BMG03_00145 PF02502 Ribose/Galactose Isomerase BMG03_00150 PF00121 Triosephosphate isomerase BMG03_00155 PF02779 Transketolase, pyrimidine binding domain BMG03_00155 PF02780 Transketolase, C-terminal domain BMG03_00155 PF00456 Transketolase, thiamine diphosphate binding domain BMG03_00210 PF01794 Ferric reductase like transmembrane component BMG03_00215 PF00174 Oxidoreductase molybdopterin binding domain BMG03_00230 PF01668 SmpB protein BMG03_00235 PF00581 Rhodanese-like domain BMG03_00240 PF00155 Aminotransferase class I and II BMG03_00250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_00250 PF00529 HlyD membrane-fusion protein of T1SS BMG03_00255 PF07690 Major Facilitator Superfamily BMG03_00260 PF00909 Ammonium Transporter Family BMG03_00265 PF00543 Nitrogen regulatory protein P-II BMG03_00270 PF00912 Transglycosylase BMG03_00270 PF00905 Penicillin binding protein transpeptidase domain BMG03_00280 PF04333 MlaA lipoprotein BMG03_00285 PF00005 ABC transporter BMG03_00285 PF00664 ABC transporter transmembrane region BMG03_00290 PF00529 HlyD membrane-fusion protein of T1SS BMG03_00305 PF00155 Aminotransferase class I and II BMG03_00310 PF01327 Polypeptide deformylase BMG03_00315 PF01327 Polypeptide deformylase BMG03_00320 PF00551 Formyl transferase BMG03_00320 PF02911 Formyl transferase, C-terminal domain BMG03_00325 PF01145 SPFH domain / Band 7 family BMG03_00345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BMG03_00355 PF10431 C-terminal, D2-small domain, of ClpB protein BMG03_00355 PF02861 Clp amino terminal domain, pathogenicity island component BMG03_00355 PF17871 AAA lid domain BMG03_00355 PF07724 AAA domain (Cdc48 subfamily) BMG03_00355 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_00360 PF11799 impB/mucB/samB family C-terminal domain BMG03_00360 PF00817 impB/mucB/samB family BMG03_00375 PF00444 Ribosomal protein L36 BMG03_00385 PF00501 AMP-binding enzyme BMG03_00385 PF14535 AMP-binding enzyme C-terminal domain BMG03_00390 PF00005 ABC transporter BMG03_00410 PF02653 Branched-chain amino acid transport system / permease component BMG03_00415 PF00005 ABC transporter BMG03_00415 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMG03_00420 PF00501 AMP-binding enzyme BMG03_00425 PF00512 His Kinase A (phospho-acceptor) domain BMG03_00425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_00430 PF00486 Transcriptional regulatory protein, C terminal BMG03_00430 PF00072 Response regulator receiver domain BMG03_00445 PF13291 ACT domain BMG03_00445 PF02824 TGS domain BMG03_00445 PF04607 Region found in RelA / SpoT proteins BMG03_00450 PF01192 RNA polymerase Rpb6 BMG03_00455 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BMG03_00465 PF09335 SNARE associated Golgi protein BMG03_00470 PF02401 LytB protein BMG03_00485 PF00075 RNase H BMG03_00490 PF03458 UPF0126 domain BMG03_00495 PF04172 LrgB-like family BMG03_00500 PF03788 LrgA family BMG03_00505 PF02463 RecF/RecN/SMC N terminal domain BMG03_00525 PF05552 Conserved TM helix BMG03_00525 PF00924 Mechanosensitive ion channel BMG03_00530 PF01329 Pterin 4 alpha carbinolamine dehydratase BMG03_00535 PF08534 Redoxin BMG03_00540 PF14759 Reductase C-terminal BMG03_00540 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_00550 PF13419 Haloacid dehalogenase-like hydrolase BMG03_00555 PF00557 Metallopeptidase family M24 BMG03_00560 PF00994 Probable molybdopterin binding domain BMG03_00560 PF18146 Damage-inducible protein CinA KH domain BMG03_00560 PF02464 Competence-damaged protein BMG03_00575 PF03466 LysR substrate binding domain BMG03_00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_00580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMG03_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_00595 PF01425 Amidase BMG03_00600 PF02686 Glu-tRNAGln amidotransferase C subunit BMG03_00610 PF09278 MerR, DNA binding BMG03_00610 PF00376 MerR family regulatory protein BMG03_00615 PF09278 MerR, DNA binding BMG03_00615 PF00376 MerR family regulatory protein BMG03_00620 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_00620 PF12806 Acetyl-CoA dehydrogenase C-terminal like BMG03_00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_00645 PF02803 Thiolase, C-terminal domain BMG03_00645 PF00108 Thiolase, N-terminal domain BMG03_00650 PF00378 Enoyl-CoA hydratase/isomerase BMG03_00650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMG03_00650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMG03_00665 PF13193 AMP-binding enzyme C-terminal domain BMG03_00665 PF00501 AMP-binding enzyme BMG03_00685 PF00005 ABC transporter BMG03_00695 PF13416 Bacterial extracellular solute-binding protein BMG03_00700 PF01066 CDP-alcohol phosphatidyltransferase BMG03_00705 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_00705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_00715 PF01979 Amidohydrolase family BMG03_00720 PF18429 Domain of unknown function (DUF5609) BMG03_00735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMG03_00735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_00735 PF01842 ACT domain BMG03_00740 PF00149 Calcineurin-like phosphoesterase BMG03_00745 PF04273 Putative phosphatase (DUF442) BMG03_00745 PF00753 Metallo-beta-lactamase superfamily BMG03_00750 PF02803 Thiolase, C-terminal domain BMG03_00750 PF00108 Thiolase, N-terminal domain BMG03_00755 PF00072 Response regulator receiver domain BMG03_00755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BMG03_00755 PF00672 HAMP domain BMG03_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_00755 PF01627 Hpt domain BMG03_00755 PF00512 His Kinase A (phospho-acceptor) domain BMG03_00760 PF09382 RQC domain BMG03_00760 PF00570 HRDC domain BMG03_00760 PF00271 Helicase conserved C-terminal domain BMG03_00760 PF00270 DEAD/DEAH box helicase BMG03_00760 PF16124 RecQ zinc-binding BMG03_00775 PF11700 Vacuole effluxer Atg22 like BMG03_00780 PF03411 Penicillin-insensitive murein endopeptidase BMG03_00790 PF02592 Putative vitamin uptake transporter BMG03_00800 PF02609 Exonuclease VII small subunit BMG03_00805 PF00348 Polyprenyl synthetase BMG03_00810 PF02780 Transketolase, C-terminal domain BMG03_00810 PF02779 Transketolase, pyrimidine binding domain BMG03_00810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BMG03_00820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BMG03_00825 PF00756 Putative esterase BMG03_00830 PF03547 Membrane transport protein BMG03_00845 PF00857 Isochorismatase family BMG03_00850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BMG03_00850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BMG03_00855 PF01384 Phosphate transporter family BMG03_00865 PF01636 Phosphotransferase enzyme family BMG03_00870 PF00202 Aminotransferase class-III BMG03_00875 PF00472 RF-1 domain BMG03_00880 PF00919 Uncharacterized protein family UPF0004 BMG03_00880 PF04055 Radical SAM superfamily BMG03_00885 PF01678 Diaminopimelate epimerase BMG03_01140 PF00813 FliP family BMG03_01145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BMG03_01155 PF08345 Flagellar M-ring protein C-terminal BMG03_01155 PF01514 Secretory protein of YscJ/FliF family BMG03_01175 PF01618 MotA/TolQ/ExbB proton channel family BMG03_01190 PF00771 FHIPEP family BMG03_01200 PF01312 FlhB HrpN YscU SpaS Family BMG03_01215 PF02107 Flagellar L-ring protein BMG03_01225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_01225 PF00460 Flagella basal body rod protein BMG03_01230 PF00460 Flagella basal body rod protein BMG03_01230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_01235 PF01313 Bacterial export proteins, family 3 BMG03_01240 PF02049 Flagellar hook-basal body complex protein FliE BMG03_01245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_01250 PF00460 Flagella basal body rod protein BMG03_01255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_01255 PF18269 T3SS EscN ATPase C-terminal domain BMG03_01255 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_01260 PF01925 Sulfite exporter TauE/SafE BMG03_01270 PF01039 Carboxyl transferase domain BMG03_01270 PF17848 Acetyl-coA carboxylase zinc finger domain BMG03_01275 PF02875 Mur ligase family, glutamate ligase domain BMG03_01275 PF08245 Mur ligase middle domain BMG03_01285 PF03969 AFG1-like ATPase BMG03_01305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BMG03_01310 PF13462 Thioredoxin BMG03_01320 PF10576 Iron-sulfur binding domain of endonuclease III BMG03_01320 PF00730 HhH-GPD superfamily base excision DNA repair protein BMG03_01320 PF14815 NUDIX domain BMG03_01320 PF00633 Helix-hairpin-helix motif BMG03_01330 PF13532 2OG-Fe(II) oxygenase superfamily BMG03_01335 PF00012 Hsp70 protein BMG03_01340 PF01556 DnaJ C terminal domain BMG03_01340 PF00226 DnaJ domain BMG03_01340 PF00684 DnaJ central domain BMG03_01345 PF04002 RadC-like JAB domain BMG03_01355 PF07517 SecA DEAD-like domain BMG03_01355 PF01043 SecA preprotein cross-linking domain BMG03_01355 PF07516 SecA Wing and Scaffold domain BMG03_01355 PF02810 SEC-C motif BMG03_01360 PF09312 SurA N-terminal domain BMG03_01360 PF00639 PPIC-type PPIASE domain BMG03_01365 PF01960 ArgJ family BMG03_01370 PF00293 NUDIX domain BMG03_01375 PF04760 Translation initiation factor IF-2, N-terminal region BMG03_01375 PF00009 Elongation factor Tu GTP binding domain BMG03_01375 PF11987 Translation-initiation factor 2 BMG03_01375 PF08364 Bacterial translation initiation factor IF-2 associated region BMG03_01385 PF13184 NusA-like KH domain BMG03_01385 PF00575 S1 RNA binding domain BMG03_01385 PF08529 NusA N-terminal domain BMG03_01390 PF02576 RimP N-terminal domain BMG03_01390 PF17384 RimP C-terminal SH3 domain BMG03_01395 PF03073 TspO/MBR family BMG03_01400 PF00561 alpha/beta hydrolase fold BMG03_01410 PF00994 Probable molybdopterin binding domain BMG03_01415 PF00764 Arginosuccinate synthase BMG03_01425 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_01425 PF00585 C-terminal regulatory domain of Threonine dehydratase BMG03_01435 PF00072 Response regulator receiver domain BMG03_01435 PF00990 Diguanylate cyclase, GGDEF domain BMG03_01440 PF00293 NUDIX domain BMG03_01445 PF01430 Hsp33 protein BMG03_01450 PF00293 NUDIX domain BMG03_01455 PF01743 Poly A polymerase head domain BMG03_01455 PF13735 tRNA nucleotidyltransferase domain 2 putative BMG03_01455 PF12627 Probable RNA and SrmB- binding site of polymerase A BMG03_01460 PF00005 ABC transporter BMG03_01460 PF00664 ABC transporter transmembrane region BMG03_01465 PF05958 tRNA (Uracil-5-)-methyltransferase BMG03_01470 PF03734 L,D-transpeptidase catalytic domain BMG03_01480 PF03734 L,D-transpeptidase catalytic domain BMG03_01490 PF00762 Ferrochelatase BMG03_01495 PF02358 Trehalose-phosphatase BMG03_01500 PF00982 Glycosyltransferase family 20 BMG03_01505 PF08241 Methyltransferase domain BMG03_01510 PF00156 Phosphoribosyl transferase domain BMG03_01515 PF00462 Glutaredoxin BMG03_01520 PF00795 Carbon-nitrogen hydrolase BMG03_01530 PF01555 DNA methylase BMG03_01530 PF18755 Restriction Enzyme Adenine Methylase Associated BMG03_01535 PF01351 Ribonuclease HII BMG03_01555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BMG03_01560 PF03435 Saccharopine dehydrogenase NADP binding domain BMG03_01560 PF16653 Saccharopine dehydrogenase C-terminal domain BMG03_01570 PF00356 Bacterial regulatory proteins, lacI family BMG03_01585 PF00459 Inositol monophosphatase family BMG03_01590 PF02348 Cytidylyltransferase BMG03_01595 PF00483 Nucleotidyl transferase BMG03_01600 PF16363 GDP-mannose 4,6 dehydratase BMG03_01625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BMG03_01630 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BMG03_01630 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BMG03_01635 PF00005 ABC transporter BMG03_01650 PF00571 CBS domain BMG03_01650 PF01380 SIS domain BMG03_01655 PF00476 DNA polymerase family A BMG03_01655 PF01612 3'-5' exonuclease BMG03_01660 PF09335 SNARE associated Golgi protein BMG03_01670 PF00005 ABC transporter BMG03_01680 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_01690 PF00465 Iron-containing alcohol dehydrogenase BMG03_01695 PF00171 Aldehyde dehydrogenase family BMG03_01700 PF03951 Glutamine synthetase, beta-Grasp domain BMG03_01700 PF00120 Glutamine synthetase, catalytic domain BMG03_01705 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_01710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_01735 PF04321 RmlD substrate binding domain BMG03_01740 PF02673 Bacitracin resistance protein BacA BMG03_01745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_01745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BMG03_01755 PF01645 Conserved region in glutamate synthase BMG03_01755 PF04898 Glutamate synthase central domain BMG03_01755 PF01493 GXGXG motif BMG03_01755 PF00310 Glutamine amidotransferases class-II BMG03_01770 PF00912 Transglycosylase BMG03_01790 PF01593 Flavin containing amine oxidoreductase BMG03_01795 PF04542 Sigma-70 region 2 BMG03_01795 PF04545 Sigma-70, region 4 BMG03_01800 PF12973 ChrR Cupin-like domain BMG03_01810 PF00483 Nucleotidyl transferase BMG03_01815 PF04321 RmlD substrate binding domain BMG03_01820 PF16363 GDP-mannose 4,6 dehydratase BMG03_01825 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BMG03_01835 PF00892 EamA-like transporter family BMG03_01840 PF00180 Isocitrate/isopropylmalate dehydrogenase BMG03_01865 PF00694 Aconitase C-terminal domain BMG03_01870 PF00330 Aconitase family (aconitate hydratase) BMG03_01875 PF00924 Mechanosensitive ion channel BMG03_01875 PF12794 Mechanosensitive ion channel inner membrane domain 1 BMG03_01875 PF12795 Mechanosensitive ion channel porin domain BMG03_01885 PF02590 Predicted SPOUT methyltransferase BMG03_01895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BMG03_01895 PF01676 Metalloenzyme superfamily BMG03_01910 PF00293 NUDIX domain BMG03_01915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BMG03_01915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BMG03_01920 PF00890 FAD binding domain BMG03_01920 PF02910 Fumarate reductase flavoprotein C-term BMG03_01925 PF02445 Quinolinate synthetase A protein BMG03_01930 PF00929 Exonuclease BMG03_01935 PF01121 Dephospho-CoA kinase BMG03_01940 PF01488 Shikimate / quinate 5-dehydrogenase BMG03_01940 PF08501 Shikimate dehydrogenase substrate binding domain BMG03_01940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BMG03_01945 PF02545 Maf-like protein BMG03_01955 PF07498 Rho termination factor, N-terminal domain BMG03_01955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_01955 PF07497 Rho termination factor, RNA-binding domain BMG03_01960 PF10396 GTP-binding protein TrmE N-terminus BMG03_01960 PF01926 50S ribosome-binding GTPase BMG03_01960 PF12631 MnmE helical domain BMG03_01965 PF01134 Glucose inhibited division protein A BMG03_01965 PF13932 GidA associated domain BMG03_01970 PF02527 rRNA small subunit methyltransferase G BMG03_01975 PF13614 AAA domain BMG03_01980 PF02195 ParB-like nuclease domain BMG03_01980 PF17762 HTH domain found in ParB protein BMG03_01985 PF04304 Protein of unknown function (DUF454) BMG03_01990 PF06969 HemN C-terminal domain BMG03_01990 PF04055 Radical SAM superfamily BMG03_01995 PF01725 Ham1 family BMG03_02000 PF03725 3' exoribonuclease family, domain 2 BMG03_02000 PF01138 3' exoribonuclease family, domain 1 BMG03_02005 PF01628 HrcA protein C terminal domain BMG03_02010 PF01025 GrpE BMG03_02015 PF01624 MutS domain I BMG03_02015 PF05192 MutS domain III BMG03_02015 PF05188 MutS domain II BMG03_02015 PF05190 MutS family domain IV BMG03_02015 PF00488 MutS domain V BMG03_02020 PF01515 Phosphate acetyl/butaryl transferase BMG03_02020 PF00390 Malic enzyme, N-terminal domain BMG03_02020 PF03949 Malic enzyme, NAD binding domain BMG03_02025 PF00486 Transcriptional regulatory protein, C terminal BMG03_02025 PF00072 Response regulator receiver domain BMG03_02030 PF01895 PhoU domain BMG03_02035 PF00005 ABC transporter BMG03_02040 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02045 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BMG03_02070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BMG03_02075 PF00814 Glycoprotease family BMG03_02105 PF02119 Flagellar P-ring protein BMG03_02115 PF00460 Flagella basal body rod protein BMG03_02115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_02120 PF00460 Flagella basal body rod protein BMG03_02120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_02120 PF07559 Flagellar basal body protein FlaE BMG03_02125 PF00691 OmpA family BMG03_02125 PF13677 Membrane MotB of proton-channel complex MotA/MotB BMG03_02135 PF04403 Paraquat-inducible protein A BMG03_02140 PF02470 MlaD protein BMG03_02150 PF01613 Flavin reductase like domain BMG03_02165 PF05114 Protein of unknown function (DUF692) BMG03_02175 PF04542 Sigma-70 region 2 BMG03_02175 PF04545 Sigma-70, region 4 BMG03_02185 PF00459 Inositol monophosphatase family BMG03_02190 PF01523 Putative modulator of DNA gyrase BMG03_02200 PF00378 Enoyl-CoA hydratase/isomerase BMG03_02210 PF01258 Prokaryotic dksA/traR C4-type zinc finger BMG03_02215 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BMG03_02215 PF05221 S-adenosyl-L-homocysteine hydrolase BMG03_02230 PF01966 HD domain BMG03_02235 PF00816 H-NS histone family BMG03_02240 PF00072 Response regulator receiver domain BMG03_02245 PF02630 SCO1/SenC BMG03_02250 PF00512 His Kinase A (phospho-acceptor) domain BMG03_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_02260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BMG03_02265 PF01636 Phosphotransferase enzyme family BMG03_02270 PF12804 MobA-like NTP transferase domain BMG03_02275 PF12705 PD-(D/E)XK nuclease superfamily BMG03_02280 PF00580 UvrD/REP helicase N-terminal domain BMG03_02280 PF12705 PD-(D/E)XK nuclease superfamily BMG03_02280 PF13361 UvrD-like helicase C-terminal domain BMG03_02285 PF00085 Thioredoxin BMG03_02295 PF00227 Proteasome subunit BMG03_02305 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_02305 PF07724 AAA domain (Cdc48 subfamily) BMG03_02320 PF06725 3D domain BMG03_02320 PF03562 MltA specific insert domain BMG03_02330 PF04186 FxsA cytoplasmic membrane protein BMG03_02335 PF02556 Preprotein translocase subunit SecB BMG03_02340 PF00293 NUDIX domain BMG03_02345 PF01103 Surface antigen BMG03_02345 PF17243 POTRA domain TamA domain 1 BMG03_02345 PF07244 Surface antigen variable number repeat BMG03_02355 PF03631 Virulence factor BrkB BMG03_02400 PF05532 CsbD-like BMG03_02415 PF07568 Histidine kinase BMG03_02415 PF12282 Signal transduction histidine kinase BMG03_02415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_02420 PF04542 Sigma-70 region 2 BMG03_02420 PF08281 Sigma-70, region 4 BMG03_02430 PF00072 Response regulator receiver domain BMG03_02435 PF00106 short chain dehydrogenase BMG03_02450 PF00392 Bacterial regulatory proteins, gntR family BMG03_02450 PF07702 UTRA domain BMG03_02455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_02460 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02465 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02470 PF00005 ABC transporter BMG03_02480 PF01321 Creatinase/Prolidase N-terminal domain BMG03_02480 PF00557 Metallopeptidase family M24 BMG03_02490 PF13533 Biotin-lipoyl like BMG03_02500 PF02687 FtsX-like permease family BMG03_02500 PF12704 MacB-like periplasmic core domain BMG03_02500 PF00005 ABC transporter BMG03_02515 PF00753 Metallo-beta-lactamase superfamily BMG03_02515 PF00581 Rhodanese-like domain BMG03_02520 PF00512 His Kinase A (phospho-acceptor) domain BMG03_02520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_02520 PF00672 HAMP domain BMG03_02525 PF00072 Response regulator receiver domain BMG03_02525 PF00486 Transcriptional regulatory protein, C terminal BMG03_02540 PF00005 ABC transporter BMG03_02585 PF00171 Aldehyde dehydrogenase family BMG03_02600 PF07690 Major Facilitator Superfamily BMG03_02615 PF04542 Sigma-70 region 2 BMG03_02615 PF08281 Sigma-70, region 4 BMG03_02635 PF01553 Acyltransferase BMG03_02650 PF00455 DeoR C terminal sensor domain BMG03_02650 PF08220 DeoR-like helix-turn-helix domain BMG03_02655 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BMG03_02655 PF01266 FAD dependent oxidoreductase BMG03_02660 PF00005 ABC transporter BMG03_02665 PF00005 ABC transporter BMG03_02665 PF17912 MalK OB fold domain BMG03_02670 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02675 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_02690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_02690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_02695 PF00465 Iron-containing alcohol dehydrogenase BMG03_02740 PF00270 DEAD/DEAH box helicase BMG03_02740 PF00271 Helicase conserved C-terminal domain BMG03_02750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_02750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_02760 PF01266 FAD dependent oxidoreductase BMG03_02760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BMG03_02765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_02765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_02770 PF09349 OHCU decarboxylase BMG03_02770 PF01014 Uricase BMG03_02775 PF07883 Cupin domain BMG03_02775 PF05899 Protein of unknown function (DUF861) BMG03_02780 PF04115 Ureidoglycolate lyase BMG03_02785 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_02785 PF00107 Zinc-binding dehydrogenase BMG03_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_02790 PF03466 LysR substrate binding domain BMG03_02795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_02795 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_02795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_02800 PF02515 CoA-transferase family III BMG03_02815 PF04955 HupE / UreJ protein BMG03_02820 PF02421 Ferrous iron transport protein B BMG03_02820 PF07670 Nucleoside recognition BMG03_02820 PF07664 Ferrous iron transport protein B C terminus BMG03_02850 PF00072 Response regulator receiver domain BMG03_02850 PF00196 Bacterial regulatory proteins, luxR family BMG03_02865 PF07536 HWE histidine kinase BMG03_02865 PF13426 PAS domain BMG03_02865 PF13581 Histidine kinase-like ATPase domain BMG03_02870 PF04143 Sulphur transport BMG03_02900 PF02075 Crossover junction endodeoxyribonuclease RuvC BMG03_02905 PF07499 RuvA, C-terminal domain BMG03_02905 PF01330 RuvA N terminal domain BMG03_02910 PF17864 RuvB AAA lid domain BMG03_02910 PF05491 RuvB C-terminal winged helix domain BMG03_02910 PF05496 Holliday junction DNA helicase RuvB P-loop domain BMG03_02925 PF04317 YcjX-like family, DUF463 BMG03_02930 PF00171 Aldehyde dehydrogenase family BMG03_02935 PF03576 Peptidase family S58 BMG03_02945 PF00171 Aldehyde dehydrogenase family BMG03_02950 PF03734 L,D-transpeptidase catalytic domain BMG03_02950 PF01476 LysM domain BMG03_02955 PF02548 Ketopantoate hydroxymethyltransferase BMG03_02960 PF02569 Pantoate-beta-alanine ligase BMG03_02965 PF07687 Peptidase dimerisation domain BMG03_02965 PF01546 Peptidase family M20/M25/M40 BMG03_02980 PF07509 Protein of unknown function (DUF1523) BMG03_02985 PF00462 Glutaredoxin BMG03_02995 PF12805 FUSC-like inner membrane protein yccS BMG03_03000 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BMG03_03000 PF00586 AIR synthase related protein, N-terminal domain BMG03_03000 PF02769 AIR synthase related protein, C-terminal domain BMG03_03010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_03010 PF03466 LysR substrate binding domain BMG03_03025 PF01177 Asp/Glu/Hydantoin racemase BMG03_03035 PF02774 Semialdehyde dehydrogenase, dimerisation domain BMG03_03035 PF01118 Semialdehyde dehydrogenase, NAD binding domain BMG03_03040 PF03100 CcmE BMG03_03055 PF09334 tRNA synthetases class I (M) BMG03_03065 PF01197 Ribosomal protein L31 BMG03_03070 PF01245 Ribosomal protein L19 BMG03_03075 PF01746 tRNA (Guanine-1)-methyltransferase BMG03_03085 PF05239 PRC-barrel domain BMG03_03085 PF01782 RimM N-terminal domain BMG03_03105 PF02978 Signal peptide binding domain BMG03_03105 PF00448 SRP54-type protein, GTPase domain BMG03_03105 PF02881 SRP54-type protein, helical bundle domain BMG03_03110 PF02525 Flavodoxin-like fold BMG03_03125 PF13632 Glycosyl transferase family group 2 BMG03_03135 PF04349 Periplasmic glucan biosynthesis protein, MdoG BMG03_03140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BMG03_03140 PF00361 Proton-conducting membrane transporter BMG03_03140 PF13244 Domain of unknown function (DUF4040) BMG03_03140 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BMG03_03145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMG03_03150 PF00361 Proton-conducting membrane transporter BMG03_03160 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BMG03_03165 PF03334 Na+/H+ antiporter subunit BMG03_03175 PF01266 FAD dependent oxidoreductase BMG03_03180 PF01266 FAD dependent oxidoreductase BMG03_03180 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BMG03_03185 PF00892 EamA-like transporter family BMG03_03190 PF01464 Transglycosylase SLT domain BMG03_03190 PF14718 Soluble lytic murein transglycosylase L domain BMG03_03195 PF00701 Dihydrodipicolinate synthetase family BMG03_03200 PF13677 Membrane MotB of proton-channel complex MotA/MotB BMG03_03200 PF00691 OmpA family BMG03_03205 PF05443 ROS/MUCR transcriptional regulator protein BMG03_03225 PF00140 Sigma-70 factor, region 1.2 BMG03_03225 PF04542 Sigma-70 region 2 BMG03_03225 PF04545 Sigma-70, region 4 BMG03_03240 PF03963 Flagellar hook capping protein - N-terminal region BMG03_03240 PF13860 FlgD Ig-like domain BMG03_03240 PF13861 FlgD Tudor-like domain BMG03_03250 PF02107 Flagellar L-ring protein BMG03_03260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_03260 PF00460 Flagella basal body rod protein BMG03_03265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_03265 PF00460 Flagella basal body rod protein BMG03_03275 PF07559 Flagellar basal body protein FlaE BMG03_03275 PF00460 Flagella basal body rod protein BMG03_03275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_03290 PF00486 Transcriptional regulatory protein, C terminal BMG03_03290 PF00072 Response regulator receiver domain BMG03_03295 PF02119 Flagellar P-ring protein BMG03_03310 PF00700 Bacterial flagellin C-terminal helical region BMG03_03310 PF00669 Bacterial flagellin N-terminal helical region BMG03_03320 PF07378 Flagellar protein FlbT BMG03_03330 PF01706 FliG C-terminal domain BMG03_03330 PF14841 FliG middle domain BMG03_03330 PF14842 FliG N-terminal domain BMG03_03335 PF00813 FliP family BMG03_03340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BMG03_03350 PF01514 Secretory protein of YscJ/FliF family BMG03_03350 PF08345 Flagellar M-ring protein C-terminal BMG03_03360 PF02154 Flagellar motor switch protein FliM BMG03_03360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BMG03_03375 PF01312 FlhB HrpN YscU SpaS Family BMG03_03385 PF00771 FHIPEP family BMG03_03395 PF01313 Bacterial export proteins, family 3 BMG03_03400 PF02049 Flagellar hook-basal body complex protein FliE BMG03_03405 PF00460 Flagella basal body rod protein BMG03_03405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BMG03_03410 PF00460 Flagella basal body rod protein BMG03_03415 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_03415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_03415 PF18269 T3SS EscN ATPase C-terminal domain BMG03_03435 PF01618 MotA/TolQ/ExbB proton channel family BMG03_03450 PF05656 Protein of unknown function (DUF805) BMG03_03455 PF08264 Anticodon-binding domain of tRNA BMG03_03455 PF00133 tRNA synthetases class I (I, L, M and V) BMG03_03470 PF01618 MotA/TolQ/ExbB proton channel family BMG03_03475 PF02472 Biopolymer transport protein ExbD/TolR BMG03_03485 PF04052 TolB amino-terminal domain BMG03_03485 PF07676 WD40-like Beta Propeller Repeat BMG03_03490 PF00691 OmpA family BMG03_03500 PF01171 PP-loop family BMG03_03505 PF17862 AAA+ lid domain BMG03_03505 PF01434 Peptidase family M41 BMG03_03505 PF06480 FtsH Extracellular BMG03_03505 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_03510 PF13649 Methyltransferase domain BMG03_03520 PF01268 Formate--tetrahydrofolate ligase BMG03_03525 PF01817 Chorismate mutase type II BMG03_03525 PF00800 Prephenate dehydratase BMG03_03530 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BMG03_03530 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BMG03_03535 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BMG03_03535 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BMG03_03590 PF05736 OprF membrane domain BMG03_03590 PF00691 OmpA family BMG03_03615 PF01464 Transglycosylase SLT domain BMG03_03615 PF10145 Phage-related minor tail protein BMG03_03615 PF01551 Peptidase family M23 BMG03_03620 PF01144 Coenzyme A transferase BMG03_03625 PF01144 Coenzyme A transferase BMG03_03630 PF01396 Topoisomerase DNA binding C4 zinc finger BMG03_03630 PF01751 Toprim domain BMG03_03630 PF13368 Topoisomerase C-terminal repeat BMG03_03630 PF01131 DNA topoisomerase BMG03_03635 PF18255 DNA processing protein A sterile alpha motif domain BMG03_03635 PF02481 DNA recombination-mediator protein A BMG03_03640 PF01523 Putative modulator of DNA gyrase BMG03_03645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BMG03_03645 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BMG03_03650 PF01040 UbiA prenyltransferase family BMG03_03660 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BMG03_03665 PF00510 Cytochrome c oxidase subunit III BMG03_03675 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_03675 PF14821 Threonine synthase N terminus BMG03_03680 PF05193 Peptidase M16 inactive domain BMG03_03680 PF00675 Insulinase (Peptidase family M16) BMG03_03685 PF13302 Acetyltransferase (GNAT) domain BMG03_03690 PF01565 FAD binding domain BMG03_03690 PF02913 FAD linked oxidases, C-terminal domain BMG03_03700 PF00156 Phosphoribosyl transferase domain BMG03_03705 PF01048 Phosphorylase superfamily BMG03_03710 PF00892 EamA-like transporter family BMG03_03730 PF00732 GMC oxidoreductase BMG03_03730 PF05199 GMC oxidoreductase BMG03_03735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BMG03_03745 PF01842 ACT domain BMG03_03745 PF13840 ACT domain BMG03_03745 PF00696 Amino acid kinase family BMG03_03750 PF02896 PEP-utilising enzyme, TIM barrel domain BMG03_03750 PF00391 PEP-utilising enzyme, mobile domain BMG03_03750 PF05524 PEP-utilising enzyme, N-terminal BMG03_03755 PF00873 AcrB/AcrD/AcrF family BMG03_03765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_03775 PF00571 CBS domain BMG03_03775 PF00005 ABC transporter BMG03_03780 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_03790 PF00781 Diacylglycerol kinase catalytic domain BMG03_03800 PF01047 MarR family BMG03_03805 PF00583 Acetyltransferase (GNAT) family BMG03_03810 PF00202 Aminotransferase class-III BMG03_03815 PF06339 Ectoine synthase BMG03_03820 PF00696 Amino acid kinase family BMG03_03820 PF13840 ACT domain BMG03_03825 PF01654 Cytochrome bd terminal oxidase subunit I BMG03_03835 PF00384 Molybdopterin oxidoreductase BMG03_03840 PF07690 Major Facilitator Superfamily BMG03_03845 PF16363 GDP-mannose 4,6 dehydratase BMG03_03850 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BMG03_03855 PF00344 SecY translocase BMG03_03860 PF05191 Adenylate kinase, active site lid BMG03_03865 PF00416 Ribosomal protein S13/S18 BMG03_03870 PF00411 Ribosomal protein S11 BMG03_03875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BMG03_03875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BMG03_03875 PF01000 RNA polymerase Rpb3/RpoA insert domain BMG03_03880 PF01196 Ribosomal protein L17 BMG03_03895 PF16193 AAA C-terminal domain BMG03_03895 PF12002 MgsA AAA+ ATPase C terminal BMG03_03895 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_03900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BMG03_03905 PF01479 S4 domain BMG03_03905 PF00849 RNA pseudouridylate synthase BMG03_03910 PF13419 Haloacid dehalogenase-like hydrolase BMG03_03920 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_03925 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_03930 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_03935 PF00005 ABC transporter BMG03_03940 PF00056 lactate/malate dehydrogenase, NAD binding domain BMG03_03940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BMG03_03945 PF00300 Histidine phosphatase superfamily (branch 1) BMG03_03955 PF00696 Amino acid kinase family BMG03_03965 PF02660 Glycerol-3-phosphate acyltransferase BMG03_03970 PF01979 Amidohydrolase family BMG03_03980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BMG03_03980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BMG03_03985 PF03167 Uracil DNA glycosylase superfamily BMG03_03995 PF00873 AcrB/AcrD/AcrF family BMG03_04005 PF02622 Uncharacterized ACR, COG1678 BMG03_04010 PF03481 Putative GTP-binding controlling metal-binding BMG03_04010 PF01300 Telomere recombination BMG03_04015 PF12806 Acetyl-CoA dehydrogenase C-terminal like BMG03_04015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_04015 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_04015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_04040 PF05145 Transition state regulatory protein AbrB BMG03_04045 PF16868 NMT1-like family BMG03_04060 PF00970 Oxidoreductase FAD-binding domain BMG03_04060 PF00175 Oxidoreductase NAD-binding domain BMG03_04060 PF00042 Globin BMG03_04080 PF00239 Resolvase, N terminal domain BMG03_04080 PF02796 Helix-turn-helix domain of resolvase BMG03_04110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMG03_04125 PF06793 Uncharacterised protein family (UPF0262) BMG03_04140 PF00583 Acetyltransferase (GNAT) family BMG03_04145 PF00795 Carbon-nitrogen hydrolase BMG03_04145 PF00583 Acetyltransferase (GNAT) family BMG03_04150 PF01176 Translation initiation factor 1A / IF-1 BMG03_04155 PF02545 Maf-like protein BMG03_04160 PF10150 Ribonuclease E/G family BMG03_04165 PF03884 DNA gyrase inhibitor YacG BMG03_04180 PF13683 Integrase core domain BMG03_04180 PF13276 HTH-like domain BMG03_04185 PF01527 Transposase BMG03_04195 PF02954 Bacterial regulatory protein, Fis family BMG03_04195 PF00072 Response regulator receiver domain BMG03_04195 PF00158 Sigma-54 interaction domain BMG03_04200 PF08447 PAS fold BMG03_04200 PF00989 PAS fold BMG03_04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_04200 PF00512 His Kinase A (phospho-acceptor) domain BMG03_04205 PF07690 Major Facilitator Superfamily BMG03_04210 PF03466 LysR substrate binding domain BMG03_04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_04220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BMG03_04220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BMG03_04220 PF00037 4Fe-4S binding domain BMG03_04225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMG03_04225 PF00384 Molybdopterin oxidoreductase BMG03_04225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BMG03_04225 PF12838 4Fe-4S dicluster domain BMG03_04225 PF01568 Molydopterin dinucleotide binding domain BMG03_04235 PF00356 Bacterial regulatory proteins, lacI family BMG03_04245 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_04260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_04260 PF00005 ABC transporter BMG03_04265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_04265 PF00005 ABC transporter BMG03_04270 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_04275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_04285 PF07729 FCD domain BMG03_04285 PF00392 Bacterial regulatory proteins, gntR family BMG03_04290 PF07687 Peptidase dimerisation domain BMG03_04290 PF01546 Peptidase family M20/M25/M40 BMG03_04295 PF09371 Tex-like protein N-terminal domain BMG03_04295 PF16921 Tex protein YqgF-like domain BMG03_04295 PF17674 HHH domain BMG03_04295 PF00575 S1 RNA binding domain BMG03_04300 PF01545 Cation efflux family BMG03_04300 PF16916 Dimerisation domain of Zinc Transporter BMG03_04305 PF06055 Exopolysaccharide synthesis, ExoD BMG03_04310 PF02798 Glutathione S-transferase, N-terminal domain BMG03_04325 PF00082 Subtilase family BMG03_04325 PF03797 Autotransporter beta-domain BMG03_04325 PF12951 Passenger-associated-transport-repeat BMG03_04330 PF13667 ThiC-associated domain BMG03_04330 PF01964 Radical SAM ThiC family BMG03_04335 PF01266 FAD dependent oxidoreductase BMG03_04345 PF05690 Thiazole biosynthesis protein ThiG BMG03_04350 PF02581 Thiamine monophosphate synthase BMG03_04355 PF00899 ThiF family BMG03_04365 PF13649 Methyltransferase domain BMG03_04375 PF04055 Radical SAM superfamily BMG03_04375 PF06968 Biotin and Thiamin Synthesis associated domain BMG03_04375 PF00202 Aminotransferase class-III BMG03_04385 PF00155 Aminotransferase class I and II BMG03_04390 PF04055 Radical SAM superfamily BMG03_04390 PF06968 Biotin and Thiamin Synthesis associated domain BMG03_04395 PF06508 Queuosine biosynthesis protein QueC BMG03_04400 PF01242 6-pyruvoyl tetrahydropterin synthase BMG03_04405 PF04055 Radical SAM superfamily BMG03_04410 PF14489 QueF-like protein BMG03_04425 PF08031 Berberine and berberine like BMG03_04425 PF01565 FAD binding domain BMG03_04440 PF00480 ROK family BMG03_04445 PF13407 Periplasmic binding protein domain BMG03_04450 PF02653 Branched-chain amino acid transport system / permease component BMG03_04455 PF00005 ABC transporter BMG03_04465 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMG03_04470 PF00571 CBS domain BMG03_04480 PF00578 AhpC/TSA family BMG03_04505 PF13426 PAS domain BMG03_04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_04505 PF00072 Response regulator receiver domain BMG03_04510 PF00486 Transcriptional regulatory protein, C terminal BMG03_04510 PF00072 Response regulator receiver domain BMG03_04515 PF00171 Aldehyde dehydrogenase family BMG03_04520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_04530 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_04535 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_04535 PF14759 Reductase C-terminal BMG03_04540 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_04545 PF00067 Cytochrome P450 BMG03_04550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_04550 PF03466 LysR substrate binding domain BMG03_04560 PF01244 Membrane dipeptidase (Peptidase family M19) BMG03_04565 PF01569 PAP2 superfamily BMG03_04575 PF06745 KaiC BMG03_04580 PF13426 PAS domain BMG03_04580 PF13581 Histidine kinase-like ATPase domain BMG03_04580 PF07536 HWE histidine kinase BMG03_04595 PF00144 Beta-lactamase BMG03_04600 PF03466 LysR substrate binding domain BMG03_04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_04605 PF07286 Protein of unknown function (DUF1445) BMG03_04610 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_04620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_04630 PF01425 Amidase BMG03_04655 PF13276 HTH-like domain BMG03_04655 PF13683 Integrase core domain BMG03_04660 PF01527 Transposase BMG03_04670 PF01381 Helix-turn-helix BMG03_04680 PF00483 Nucleotidyl transferase BMG03_04685 PF04321 RmlD substrate binding domain BMG03_04690 PF16363 GDP-mannose 4,6 dehydratase BMG03_04695 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BMG03_04700 PF00483 Nucleotidyl transferase BMG03_04700 PF01050 Mannose-6-phosphate isomerase BMG03_04710 PF00534 Glycosyl transferases group 1 BMG03_04725 PF13439 Glycosyltransferase Family 4 BMG03_04725 PF00534 Glycosyl transferases group 1 BMG03_04735 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_04735 PF12464 Maltose acetyltransferase BMG03_04745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BMG03_04750 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_04755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_04755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMG03_04760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMG03_04760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMG03_04760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMG03_04765 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMG03_04765 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMG03_04765 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMG03_04775 PF00535 Glycosyl transferase family 2 BMG03_04790 PF03466 LysR substrate binding domain BMG03_04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_04795 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMG03_04795 PF00005 ABC transporter BMG03_04800 PF00005 ABC transporter BMG03_04805 PF13458 Periplasmic binding protein BMG03_04810 PF02653 Branched-chain amino acid transport system / permease component BMG03_04820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_04820 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_04820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_04825 PF00107 Zinc-binding dehydrogenase BMG03_04825 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_04830 PF13193 AMP-binding enzyme C-terminal domain BMG03_04830 PF00501 AMP-binding enzyme BMG03_04835 PF01527 Transposase BMG03_04840 PF13276 HTH-like domain BMG03_04840 PF13683 Integrase core domain BMG03_04855 PF00920 Dehydratase family BMG03_04860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_04860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_04865 PF01370 NAD dependent epimerase/dehydratase family BMG03_04870 PF01565 FAD binding domain BMG03_04870 PF02913 FAD linked oxidases, C-terminal domain BMG03_04875 PF00392 Bacterial regulatory proteins, gntR family BMG03_04875 PF07729 FCD domain BMG03_04885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BMG03_04890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_04895 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_04905 PF00171 Aldehyde dehydrogenase family BMG03_04910 PF00795 Carbon-nitrogen hydrolase BMG03_04915 PF07687 Peptidase dimerisation domain BMG03_04915 PF01546 Peptidase family M20/M25/M40 BMG03_04920 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_04925 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_04935 PF00005 ABC transporter BMG03_04935 PF08402 TOBE domain BMG03_04945 PF01418 Helix-turn-helix domain, rpiR family BMG03_04945 PF01380 SIS domain BMG03_04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_04950 PF03466 LysR substrate binding domain BMG03_04960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_04965 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_04970 PF01266 FAD dependent oxidoreductase BMG03_04980 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_04980 PF04324 BFD-like [2Fe-2S] binding domain BMG03_04985 PF01042 Endoribonuclease L-PSP BMG03_04990 PF03109 ABC1 family BMG03_05000 PF00392 Bacterial regulatory proteins, gntR family BMG03_05000 PF07729 FCD domain BMG03_05005 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_05010 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05015 PF00005 ABC transporter BMG03_05020 PF00266 Aminotransferase class-V BMG03_05025 PF01979 Amidohydrolase family BMG03_05025 PF00449 Urease alpha-subunit, N-terminal domain BMG03_05040 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMG03_05040 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMG03_05045 PF04073 Aminoacyl-tRNA editing domain BMG03_05050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMG03_05050 PF00356 Bacterial regulatory proteins, lacI family BMG03_05060 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05065 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05075 PF08402 TOBE domain BMG03_05075 PF00005 ABC transporter BMG03_05095 PF00226 DnaJ domain BMG03_05095 PF01556 DnaJ C terminal domain BMG03_05100 PF00313 'Cold-shock' DNA-binding domain BMG03_05110 PF00313 'Cold-shock' DNA-binding domain BMG03_05120 PF00512 His Kinase A (phospho-acceptor) domain BMG03_05120 PF07689 KaiB domain BMG03_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_05125 PF00072 Response regulator receiver domain BMG03_05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_05125 PF13426 PAS domain BMG03_05150 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05155 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05160 PF17912 MalK OB fold domain BMG03_05160 PF00005 ABC transporter BMG03_05160 PF03459 TOBE domain BMG03_05165 PF03450 CO dehydrogenase flavoprotein C-terminal domain BMG03_05165 PF00941 FAD binding domain in molybdopterin dehydrogenase BMG03_05170 PF01799 [2Fe-2S] binding domain BMG03_05170 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_05175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BMG03_05175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMG03_05180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_05180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_05190 PF07687 Peptidase dimerisation domain BMG03_05190 PF01546 Peptidase family M20/M25/M40 BMG03_05195 PF02625 XdhC and CoxI family BMG03_05195 PF13478 XdhC Rossmann domain BMG03_05200 PF09335 SNARE associated Golgi protein BMG03_05205 PF00582 Universal stress protein family BMG03_05215 PF01037 Lrp/AsnC ligand binding domain BMG03_05220 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMG03_05220 PF01571 Aminomethyltransferase folate-binding domain BMG03_05225 PF06167 Glucose-regulated metallo-peptidase M90 BMG03_05245 PF13340 Putative transposase of IS4/5 family (DUF4096) BMG03_05255 PF00483 Nucleotidyl transferase BMG03_05255 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_05255 PF14602 Hexapeptide repeat of succinyl-transferase BMG03_05270 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BMG03_05275 PF00141 Peroxidase BMG03_05280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_05280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMG03_05295 PF02080 TrkA-C domain BMG03_05295 PF02254 TrkA-N domain BMG03_05300 PF02386 Cation transport protein BMG03_05305 PF02386 Cation transport protein BMG03_05310 PF02798 Glutathione S-transferase, N-terminal domain BMG03_05310 PF14497 Glutathione S-transferase, C-terminal domain BMG03_05320 PF04209 homogentisate 1,2-dioxygenase BMG03_05325 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMG03_05335 PF01494 FAD binding domain BMG03_05345 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_05355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_05365 PF13404 AsnC-type helix-turn-helix domain BMG03_05365 PF01037 Lrp/AsnC ligand binding domain BMG03_05370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMG03_05375 PF01527 Transposase BMG03_05380 PF13276 HTH-like domain BMG03_05380 PF13683 Integrase core domain BMG03_05395 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BMG03_05400 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BMG03_05400 PF00361 Proton-conducting membrane transporter BMG03_05405 PF03466 LysR substrate binding domain BMG03_05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_05415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_05425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_05425 PF03466 LysR substrate binding domain BMG03_05430 PF12146 Serine aminopeptidase, S33 BMG03_05435 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_05445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_05450 PF03466 LysR substrate binding domain BMG03_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_05455 PF00892 EamA-like transporter family BMG03_05460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_05460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_05465 PF00596 Class II Aldolase and Adducin N-terminal domain BMG03_05470 PF17042 Nucleotide-binding C-terminal domain BMG03_05470 PF07005 Sugar-binding N-terminal domain BMG03_05475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_05475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_05480 PF01261 Xylose isomerase-like TIM barrel BMG03_05485 PF00248 Aldo/keto reductase family BMG03_05495 PF02653 Branched-chain amino acid transport system / permease component BMG03_05505 PF00005 ABC transporter BMG03_05510 PF16363 GDP-mannose 4,6 dehydratase BMG03_05515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMG03_05515 PF00356 Bacterial regulatory proteins, lacI family BMG03_05520 PF00106 short chain dehydrogenase BMG03_05525 PF00180 Isocitrate/isopropylmalate dehydrogenase BMG03_05530 PF00356 Bacterial regulatory proteins, lacI family BMG03_05535 PF02653 Branched-chain amino acid transport system / permease component BMG03_05540 PF13407 Periplasmic binding protein domain BMG03_05545 PF00005 ABC transporter BMG03_05550 PF02653 Branched-chain amino acid transport system / permease component BMG03_05555 PF02733 Dak1 domain BMG03_05560 PF02734 DAK2 domain BMG03_05565 PF00248 Aldo/keto reductase family BMG03_05580 PF00703 Glycosyl hydrolases family 2 BMG03_05580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BMG03_05580 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BMG03_05580 PF02837 Glycosyl hydrolases family 2, sugar binding domain BMG03_05585 PF13378 Enolase C-terminal domain-like BMG03_05585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMG03_05590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_05595 PF00005 ABC transporter BMG03_05595 PF17912 MalK OB fold domain BMG03_05600 PF01614 Bacterial transcriptional regulator BMG03_05600 PF09339 IclR helix-turn-helix domain BMG03_05605 PF01547 Bacterial extracellular solute-binding protein BMG03_05610 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05615 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_05620 PF16874 Glycosyl hydrolase family 36 C-terminal domain BMG03_05620 PF16875 Glycosyl hydrolase family 36 N-terminal domain BMG03_05630 PF01081 KDPG and KHG aldolase BMG03_05635 PF08450 SMP-30/Gluconolactonase/LRE-like region BMG03_05640 PF13360 PQQ-like domain BMG03_05640 PF01011 PQQ enzyme repeat BMG03_05650 PF02110 Hydroxyethylthiazole kinase family BMG03_05655 PF02581 Thiamine monophosphate synthase BMG03_05660 PF08543 Phosphomethylpyrimidine kinase BMG03_05665 PF03070 TENA/THI-4/PQQC family BMG03_05675 PF00067 Cytochrome P450 BMG03_05700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMG03_05700 PF00205 Thiamine pyrophosphate enzyme, central domain BMG03_05700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMG03_05705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMG03_05705 PF13378 Enolase C-terminal domain-like BMG03_05720 PF05199 GMC oxidoreductase BMG03_05720 PF00732 GMC oxidoreductase BMG03_05740 PF00512 His Kinase A (phospho-acceptor) domain BMG03_05740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_05740 PF08521 Two-component sensor kinase N-terminal BMG03_05745 PF00072 Response regulator receiver domain BMG03_05745 PF00486 Transcriptional regulatory protein, C terminal BMG03_05770 PF00175 Oxidoreductase NAD-binding domain BMG03_05770 PF00258 Flavodoxin BMG03_05770 PF00667 FAD binding domain BMG03_05775 PF02424 ApbE family BMG03_05780 PF00795 Carbon-nitrogen hydrolase BMG03_05795 PF16197 Ketoacyl-synthetase C-terminal extension BMG03_05795 PF00698 Acyl transferase domain BMG03_05795 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_05795 PF00109 Beta-ketoacyl synthase, N-terminal domain BMG03_05795 PF02801 Beta-ketoacyl synthase, C-terminal domain BMG03_05795 PF08659 KR domain BMG03_05795 PF00550 Phosphopantetheine attachment site BMG03_05795 PF14765 Polyketide synthase dehydratase BMG03_05800 PF00795 Carbon-nitrogen hydrolase BMG03_05800 PF02540 NAD synthase BMG03_05810 PF00491 Arginase family BMG03_05820 PF08402 TOBE domain BMG03_05820 PF00005 ABC transporter BMG03_05840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMG03_05850 PF05199 GMC oxidoreductase BMG03_05850 PF00732 GMC oxidoreductase BMG03_05855 PF05726 Pirin C-terminal cupin domain BMG03_05855 PF02678 Pirin BMG03_05860 PF03358 NADPH-dependent FMN reductase BMG03_05870 PF00231 ATP synthase BMG03_05875 PF00306 ATP synthase alpha/beta chain, C terminal domain BMG03_05875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_05875 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_05880 PF00430 ATP synthase B/B' CF(0) BMG03_05885 PF00137 ATP synthase subunit C BMG03_05890 PF00119 ATP synthase A chain BMG03_05905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BMG03_05910 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_05910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_05920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_05920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BMG03_05925 PF03239 Iron permease FTR1 family BMG03_05930 PF09375 Imelysin BMG03_05930 PF13473 Cupredoxin-like domain BMG03_05935 PF10518 TAT (twin-arginine translocation) pathway signal sequence BMG03_05935 PF04261 Dyp-type peroxidase family BMG03_05940 PF00483 Nucleotidyl transferase BMG03_05945 PF00128 Alpha amylase, catalytic domain BMG03_05950 PF11941 Domain of unknown function (DUF3459) BMG03_05950 PF00128 Alpha amylase, catalytic domain BMG03_05950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMG03_05955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMG03_05955 PF00128 Alpha amylase, catalytic domain BMG03_05960 PF00199 Catalase BMG03_05960 PF06628 Catalase-related immune-responsive BMG03_05965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMG03_05970 PF05951 Bacterial protein of unknown function (DUF882) BMG03_05975 PF01799 [2Fe-2S] binding domain BMG03_05975 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_05980 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BMG03_05980 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMG03_05990 PF07976 Phenol hydroxylase, C-terminal dimerisation domain BMG03_05990 PF01494 FAD binding domain BMG03_05995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_05995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_06000 PF02735 Ku70/Ku80 beta-barrel domain BMG03_06005 PF13298 DNA polymerase Ligase (LigD) BMG03_06005 PF01068 ATP dependent DNA ligase domain BMG03_06005 PF04679 ATP dependent DNA ligase C terminal region BMG03_06010 PF08521 Two-component sensor kinase N-terminal BMG03_06010 PF00512 His Kinase A (phospho-acceptor) domain BMG03_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_06015 PF00486 Transcriptional regulatory protein, C terminal BMG03_06015 PF00072 Response regulator receiver domain BMG03_06020 PF02683 Cytochrome C biogenesis protein transmembrane region BMG03_06020 PF11412 Disulphide bond corrector protein DsbC BMG03_06025 PF03734 L,D-transpeptidase catalytic domain BMG03_06025 PF17969 L,D-transpeptidase C-terminal domain BMG03_06030 PF06965 Na+/H+ antiporter 1 BMG03_06030 PF13462 Thioredoxin BMG03_06045 PF00356 Bacterial regulatory proteins, lacI family BMG03_06045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMG03_06055 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_06065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_06070 PF00296 Luciferase-like monooxygenase BMG03_06075 PF00378 Enoyl-CoA hydratase/isomerase BMG03_06085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_06095 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_06100 PF02682 Carboxyltransferase domain, subdomain C and D BMG03_06110 PF03746 LamB/YcsF family BMG03_06120 PF00510 Cytochrome c oxidase subunit III BMG03_06125 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_06130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BMG03_06130 PF06481 COX Aromatic Rich Motif BMG03_06145 PF00982 Glycosyltransferase family 20 BMG03_06155 PF02469 Fasciclin domain BMG03_06170 PF02625 XdhC and CoxI family BMG03_06170 PF13478 XdhC Rossmann domain BMG03_06175 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMG03_06175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BMG03_06180 PF03450 CO dehydrogenase flavoprotein C-terminal domain BMG03_06180 PF00941 FAD binding domain in molybdopterin dehydrogenase BMG03_06185 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_06185 PF01799 [2Fe-2S] binding domain BMG03_06185 PF10518 TAT (twin-arginine translocation) pathway signal sequence BMG03_06200 PF00248 Aldo/keto reductase family BMG03_06205 PF07690 Major Facilitator Superfamily BMG03_06210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_06215 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06220 PF12911 N-terminal TM domain of oligopeptide transport permease C BMG03_06220 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_06225 PF00005 ABC transporter BMG03_06230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_06230 PF00005 ABC transporter BMG03_06235 PF02872 5'-nucleotidase, C-terminal domain BMG03_06235 PF00149 Calcineurin-like phosphoesterase BMG03_06240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_06240 PF00529 HlyD membrane-fusion protein of T1SS BMG03_06245 PF00873 AcrB/AcrD/AcrF family BMG03_06265 PF00920 Dehydratase family BMG03_06270 PF00270 DEAD/DEAH box helicase BMG03_06270 PF00271 Helicase conserved C-terminal domain BMG03_06270 PF08494 DEAD/H associated BMG03_06285 PF01263 Aldose 1-epimerase BMG03_06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_06300 PF00986 DNA gyrase B subunit, carboxyl terminus BMG03_06300 PF01751 Toprim domain BMG03_06300 PF00204 DNA gyrase B BMG03_06315 PF03976 Polyphosphate kinase 2 (PPK2) BMG03_06325 PF01322 Cytochrome C' BMG03_06335 PF01554 MatE BMG03_06340 PF01494 FAD binding domain BMG03_06355 PF07729 FCD domain BMG03_06355 PF00392 Bacterial regulatory proteins, gntR family BMG03_06365 PF00117 Glutamine amidotransferase class-I BMG03_06365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BMG03_06370 PF09424 Yqey-like protein BMG03_06385 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_06395 PF03099 Biotin/lipoate A/B protein ligase family BMG03_06415 PF08402 TOBE domain BMG03_06415 PF00005 ABC transporter BMG03_06430 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06435 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06450 PF02511 Thymidylate synthase complementing protein BMG03_06460 PF01195 Peptidyl-tRNA hydrolase BMG03_06470 PF01386 Ribosomal L25p family BMG03_06470 PF14693 Ribosomal protein TL5, C-terminal domain BMG03_06480 PF01070 FMN-dependent dehydrogenase BMG03_06485 PF02535 ZIP Zinc transporter BMG03_06490 PF00202 Aminotransferase class-III BMG03_06495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BMG03_06495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BMG03_06500 PF01926 50S ribosome-binding GTPase BMG03_06510 PF02096 60Kd inner membrane protein BMG03_06510 PF14849 YidC periplasmic domain BMG03_06515 PF00990 Diguanylate cyclase, GGDEF domain BMG03_06515 PF00498 FHA domain BMG03_06515 PF00563 EAL domain BMG03_06520 PF01171 PP-loop family BMG03_06525 PF01809 Putative membrane protein insertion efficiency factor BMG03_06535 PF00468 Ribosomal protein L34 BMG03_06540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_06540 PF00512 His Kinase A (phospho-acceptor) domain BMG03_06540 PF13426 PAS domain BMG03_06540 PF00672 HAMP domain BMG03_06555 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BMG03_06575 PF07729 FCD domain BMG03_06575 PF00392 Bacterial regulatory proteins, gntR family BMG03_06580 PF00830 Ribosomal L28 family BMG03_06605 PF00271 Helicase conserved C-terminal domain BMG03_06605 PF08482 ATP-dependent helicase C-terminal BMG03_06605 PF04408 Helicase associated domain (HA2) BMG03_06605 PF00270 DEAD/DEAH box helicase BMG03_06610 PF03061 Thioesterase superfamily BMG03_06615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_06615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_06625 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMG03_06625 PF00364 Biotin-requiring enzyme BMG03_06625 PF02817 e3 binding domain BMG03_06630 PF00676 Dehydrogenase E1 component BMG03_06630 PF02779 Transketolase, pyrimidine binding domain BMG03_06630 PF16078 2-oxoglutarate dehydrogenase N-terminus BMG03_06630 PF16870 2-oxoglutarate dehydrogenase C-terminal BMG03_06635 PF02629 CoA binding domain BMG03_06635 PF00549 CoA-ligase BMG03_06640 PF00549 CoA-ligase BMG03_06640 PF08442 ATP-grasp domain BMG03_06655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BMG03_06655 PF00056 lactate/malate dehydrogenase, NAD binding domain BMG03_06670 PF03328 HpcH/HpaI aldolase/citrate lyase family BMG03_06685 PF01575 MaoC like domain BMG03_06690 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BMG03_06695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BMG03_06700 PF00890 FAD binding domain BMG03_06700 PF02910 Fumarate reductase flavoprotein C-term BMG03_06710 PF13237 4Fe-4S dicluster domain BMG03_06710 PF13085 2Fe-2S iron-sulfur cluster binding domain BMG03_06720 PF00005 ABC transporter BMG03_06730 PF00476 DNA polymerase family A BMG03_06730 PF01612 3'-5' exonuclease BMG03_06730 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BMG03_06730 PF01367 5'-3' exonuclease, C-terminal SAM fold BMG03_06740 PF01545 Cation efflux family BMG03_06745 PF01261 Xylose isomerase-like TIM barrel BMG03_06755 PF17863 AAA lid domain BMG03_06755 PF07726 ATPase family associated with various cellular activities (AAA) BMG03_06775 PF00294 pfkB family carbohydrate kinase BMG03_06780 PF02580 D-Tyr-tRNA(Tyr) deacylase BMG03_06785 PF00265 Thymidine kinase BMG03_06790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMG03_06790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMG03_06795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_06795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMG03_06800 PF01588 Putative tRNA binding domain BMG03_06805 PF14748 Pyrroline-5-carboxylate reductase dimerisation BMG03_06805 PF03807 NADP oxidoreductase coenzyme F420-dependent BMG03_06820 PF00085 Thioredoxin BMG03_06840 PF05816 Toxic anion resistance protein (TelA) BMG03_06850 PF01479 S4 domain BMG03_06850 PF00849 RNA pseudouridylate synthase BMG03_06855 PF14437 MafB19-like deaminase BMG03_06875 PF01554 MatE BMG03_06880 PF00120 Glutamine synthetase, catalytic domain BMG03_06885 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06890 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_06895 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_06900 PF00005 ABC transporter BMG03_06910 PF00107 Zinc-binding dehydrogenase BMG03_06910 PF16884 N-terminal domain of oxidoreductase BMG03_06915 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BMG03_06920 PF00977 Histidine biosynthesis protein BMG03_06925 PF00294 pfkB family carbohydrate kinase BMG03_06940 PF00749 tRNA synthetases class I (E and Q), catalytic domain BMG03_06945 PF01571 Aminomethyltransferase folate-binding domain BMG03_06945 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMG03_06950 PF01597 Glycine cleavage H-protein BMG03_06955 PF02347 Glycine cleavage system P-protein BMG03_06960 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BMG03_06965 PF03447 Homoserine dehydrogenase, NAD binding domain BMG03_06965 PF00742 Homoserine dehydrogenase BMG03_06965 PF01842 ACT domain BMG03_06975 PF00440 Bacterial regulatory proteins, tetR family BMG03_06985 PF00977 Histidine biosynthesis protein BMG03_07000 PF00117 Glutamine amidotransferase class-I BMG03_07005 PF00475 Imidazoleglycerol-phosphate dehydratase BMG03_07020 PF02844 Phosphoribosylglycinamide synthetase, N domain BMG03_07020 PF02843 Phosphoribosylglycinamide synthetase, C domain BMG03_07020 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BMG03_07035 PF00487 Fatty acid desaturase BMG03_07045 PF00448 SRP54-type protein, GTPase domain BMG03_07045 PF02881 SRP54-type protein, helical bundle domain BMG03_07055 PF04279 Intracellular septation protein A BMG03_07070 PF01979 Amidohydrolase family BMG03_07080 PF01979 Amidohydrolase family BMG03_07085 PF03448 MgtE intracellular N domain BMG03_07085 PF00571 CBS domain BMG03_07085 PF01769 Divalent cation transporter BMG03_07090 PF01812 5-formyltetrahydrofolate cyclo-ligase family BMG03_07095 PF00551 Formyl transferase BMG03_07110 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_07125 PF13180 PDZ domain BMG03_07140 PF12221 Bacterial membrane protein N terminal BMG03_07140 PF01145 SPFH domain / Band 7 family BMG03_07145 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_07145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_07150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BMG03_07155 PF03313 Serine dehydratase alpha chain BMG03_07155 PF03315 Serine dehydratase beta chain BMG03_07160 PF00271 Helicase conserved C-terminal domain BMG03_07160 PF00270 DEAD/DEAH box helicase BMG03_07170 PF00202 Aminotransferase class-III BMG03_07175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_07175 PF03466 LysR substrate binding domain BMG03_07190 PF07687 Peptidase dimerisation domain BMG03_07190 PF01546 Peptidase family M20/M25/M40 BMG03_07200 PF00709 Adenylosuccinate synthetase BMG03_07225 PF01297 Zinc-uptake complex component A periplasmic BMG03_07235 PF00005 ABC transporter BMG03_07240 PF00950 ABC 3 transport family BMG03_07245 PF00171 Aldehyde dehydrogenase family BMG03_07250 PF13520 Amino acid permease BMG03_07265 PF00456 Transketolase, thiamine diphosphate binding domain BMG03_07265 PF02780 Transketolase, C-terminal domain BMG03_07265 PF02779 Transketolase, pyrimidine binding domain BMG03_07285 PF00156 Phosphoribosyl transferase domain BMG03_07285 PF13537 Glutamine amidotransferase domain BMG03_07295 PF06745 KaiC BMG03_07295 PF18073 Rubredoxin metal binding domain BMG03_07310 PF14572 Phosphoribosyl synthetase-associated domain BMG03_07310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BMG03_07315 PF00892 EamA-like transporter family BMG03_07320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BMG03_07320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BMG03_07340 PF00892 EamA-like transporter family BMG03_07345 PF03641 Possible lysine decarboxylase BMG03_07355 PF00005 ABC transporter BMG03_07355 PF00664 ABC transporter transmembrane region BMG03_07360 PF00873 AcrB/AcrD/AcrF family BMG03_07375 PF13360 PQQ-like domain BMG03_07380 PF01926 50S ribosome-binding GTPase BMG03_07380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BMG03_07390 PF02403 Seryl-tRNA synthetase N-terminal domain BMG03_07390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMG03_07400 PF00873 AcrB/AcrD/AcrF family BMG03_07405 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_07410 PF00005 ABC transporter BMG03_07415 PF09084 NMT1/THI5 like BMG03_07420 PF02872 5'-nucleotidase, C-terminal domain BMG03_07420 PF00149 Calcineurin-like phosphoesterase BMG03_07425 PF00293 NUDIX domain BMG03_07425 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BMG03_07425 PF09297 NADH pyrophosphatase zinc ribbon domain BMG03_07435 PF00800 Prephenate dehydratase BMG03_07435 PF01842 ACT domain BMG03_07435 PF01817 Chorismate mutase type II BMG03_07440 PF00034 Cytochrome c BMG03_07445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_07450 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_07455 PF12911 N-terminal TM domain of oligopeptide transport permease C BMG03_07455 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_07460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_07460 PF00005 ABC transporter BMG03_07465 PF13439 Glycosyltransferase Family 4 BMG03_07475 PF14579 Helix-hairpin-helix motif BMG03_07475 PF02811 PHP domain BMG03_07475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BMG03_07475 PF07733 Bacterial DNA polymerase III alpha NTPase domain BMG03_07475 PF01336 OB-fold nucleic acid binding domain BMG03_07495 PF01043 SecA preprotein cross-linking domain BMG03_07495 PF07517 SecA DEAD-like domain BMG03_07515 PF03552 Cellulose synthase BMG03_07515 PF00535 Glycosyl transferase family 2 BMG03_07515 PF07238 PilZ domain BMG03_07520 PF16363 GDP-mannose 4,6 dehydratase BMG03_07530 PF03472 Autoinducer binding domain BMG03_07530 PF00196 Bacterial regulatory proteins, luxR family BMG03_07540 PF00582 Universal stress protein family BMG03_07550 PF16868 NMT1-like family BMG03_07560 PF00202 Aminotransferase class-III BMG03_07570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_07570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_07575 PF00535 Glycosyl transferase family 2 BMG03_07590 PF00149 Calcineurin-like phosphoesterase BMG03_07595 PF00576 HIUase/Transthyretin family BMG03_07605 PF00672 HAMP domain BMG03_07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMG03_07605 PF02203 Tar ligand binding domain homologue BMG03_07610 PF00574 Clp protease BMG03_07615 PF06689 ClpX C4-type zinc finger BMG03_07615 PF10431 C-terminal, D2-small domain, of ClpB protein BMG03_07615 PF07724 AAA domain (Cdc48 subfamily) BMG03_07640 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BMG03_07650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_07650 PF00289 Biotin carboxylase, N-terminal domain BMG03_07650 PF02785 Biotin carboxylase C-terminal domain BMG03_07655 PF00364 Biotin-requiring enzyme BMG03_07660 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_07660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BMG03_07665 PF01180 Dihydroorotate dehydrogenase BMG03_07675 PF08362 YcdC-like protein, C-terminal region BMG03_07675 PF00440 Bacterial regulatory proteins, tetR family BMG03_07680 PF00202 Aminotransferase class-III BMG03_07695 PF08362 YcdC-like protein, C-terminal region BMG03_07695 PF00440 Bacterial regulatory proteins, tetR family BMG03_07700 PF01546 Peptidase family M20/M25/M40 BMG03_07700 PF07687 Peptidase dimerisation domain BMG03_07705 PF01979 Amidohydrolase family BMG03_07715 PF00005 ABC transporter BMG03_07720 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_07725 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_07745 PF09856 Predicted transcriptional regulator (DUF2083) BMG03_07745 PF06114 IrrE N-terminal-like domain BMG03_07745 PF01381 Helix-turn-helix BMG03_07750 PF00486 Transcriptional regulatory protein, C terminal BMG03_07750 PF00072 Response regulator receiver domain BMG03_07760 PF00672 HAMP domain BMG03_07760 PF13426 PAS domain BMG03_07760 PF00512 His Kinase A (phospho-acceptor) domain BMG03_07760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_07775 PF04143 Sulphur transport BMG03_07795 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BMG03_07815 PF01618 MotA/TolQ/ExbB proton channel family BMG03_07820 PF02472 Biopolymer transport protein ExbD/TolR BMG03_07830 PF03544 Gram-negative bacterial TonB protein C-terminal BMG03_07835 PF01546 Peptidase family M20/M25/M40 BMG03_07835 PF07687 Peptidase dimerisation domain BMG03_07845 PF06463 Molybdenum Cofactor Synthesis C BMG03_07845 PF04055 Radical SAM superfamily BMG03_07855 PF04191 Phospholipid methyltransferase BMG03_07860 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BMG03_07860 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BMG03_07860 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BMG03_07865 PF02233 NAD(P) transhydrogenase beta subunit BMG03_07870 PF02657 Fe-S metabolism associated domain BMG03_07880 PF01612 3'-5' exonuclease BMG03_07880 PF00570 HRDC domain BMG03_07890 PF00551 Formyl transferase BMG03_07895 PF02769 AIR synthase related protein, C-terminal domain BMG03_07895 PF00586 AIR synthase related protein, N-terminal domain BMG03_07910 PF00884 Sulfatase BMG03_07910 PF12411 Choline sulfatase enzyme C terminal BMG03_07915 PF00248 Aldo/keto reductase family BMG03_07930 PF16658 Class II release factor RF3, C-terminal domain BMG03_07930 PF03144 Elongation factor Tu domain 2 BMG03_07930 PF00009 Elongation factor Tu GTP binding domain BMG03_07945 PF01521 Iron-sulphur cluster biosynthesis BMG03_07950 PF13286 Phosphohydrolase-associated domain BMG03_07950 PF01966 HD domain BMG03_07955 PF02566 OsmC-like protein BMG03_07960 PF02798 Glutathione S-transferase, N-terminal domain BMG03_07960 PF00043 Glutathione S-transferase, C-terminal domain BMG03_07970 PF01053 Cys/Met metabolism PLP-dependent enzyme BMG03_07975 PF02649 Type I GTP cyclohydrolase folE2 BMG03_07980 PF00580 UvrD/REP helicase N-terminal domain BMG03_07980 PF13361 UvrD-like helicase C-terminal domain BMG03_07985 PF01566 Natural resistance-associated macrophage protein BMG03_07990 PF02742 Iron dependent repressor, metal binding and dimerisation domain BMG03_07990 PF01325 Iron dependent repressor, N-terminal DNA binding domain BMG03_08005 PF10609 NUBPL iron-transfer P-loop NTPase BMG03_08010 PF02381 MraZ protein, putative antitoxin-like BMG03_08015 PF01795 MraW methylase family BMG03_08025 PF00905 Penicillin binding protein transpeptidase domain BMG03_08025 PF03717 Penicillin-binding Protein dimerisation domain BMG03_08030 PF08245 Mur ligase middle domain BMG03_08030 PF02875 Mur ligase family, glutamate ligase domain BMG03_08030 PF01225 Mur ligase family, catalytic domain BMG03_08035 PF08245 Mur ligase middle domain BMG03_08035 PF02875 Mur ligase family, glutamate ligase domain BMG03_08035 PF01225 Mur ligase family, catalytic domain BMG03_08040 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BMG03_08040 PF00953 Glycosyl transferase family 4 BMG03_08050 PF08245 Mur ligase middle domain BMG03_08050 PF02875 Mur ligase family, glutamate ligase domain BMG03_08085 PF00437 Type II/IV secretion system protein BMG03_08115 PF01370 NAD dependent epimerase/dehydratase family BMG03_08120 PF02073 Thermophilic metalloprotease (M29) BMG03_08140 PF07722 Peptidase C26 BMG03_08155 PF01380 SIS domain BMG03_08160 PF12804 MobA-like NTP transferase domain BMG03_08160 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_08165 PF13419 Haloacid dehalogenase-like hydrolase BMG03_08170 PF07690 Major Facilitator Superfamily BMG03_08175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BMG03_08180 PF02423 Ornithine cyclodeaminase/mu-crystallin family BMG03_08185 PF01266 FAD dependent oxidoreductase BMG03_08190 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_08190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_08190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_08205 PF01039 Carboxyl transferase domain BMG03_08210 PF02785 Biotin carboxylase C-terminal domain BMG03_08210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_08210 PF00364 Biotin-requiring enzyme BMG03_08210 PF00289 Biotin carboxylase, N-terminal domain BMG03_08215 PF00043 Glutathione S-transferase, C-terminal domain BMG03_08215 PF13417 Glutathione S-transferase, N-terminal domain BMG03_08220 PF00682 HMGL-like BMG03_08225 PF00378 Enoyl-CoA hydratase/isomerase BMG03_08230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BMG03_08235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BMG03_08240 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BMG03_08245 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BMG03_08255 PF00829 Ribosomal prokaryotic L21 protein BMG03_08265 PF10531 SLBB domain BMG03_08265 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BMG03_08265 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BMG03_08280 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BMG03_08280 PF00384 Molybdopterin oxidoreductase BMG03_08280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMG03_08290 PF00146 NADH dehydrogenase BMG03_08295 PF12838 4Fe-4S dicluster domain BMG03_08300 PF02627 Carboxymuconolactone decarboxylase family BMG03_08305 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BMG03_08310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMG03_08315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BMG03_08315 PF00361 Proton-conducting membrane transporter BMG03_08320 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BMG03_08320 PF00361 Proton-conducting membrane transporter BMG03_08325 PF00361 Proton-conducting membrane transporter BMG03_08330 PF03099 Biotin/lipoate A/B protein ligase family BMG03_08330 PF02237 Biotin protein ligase C terminal domain BMG03_08335 PF03309 Type III pantothenate kinase BMG03_08340 PF12706 Beta-lactamase superfamily domain BMG03_08340 PF17770 Ribonuclease J C-terminal domain BMG03_08340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BMG03_08345 PF00270 DEAD/DEAH box helicase BMG03_08345 PF00271 Helicase conserved C-terminal domain BMG03_08360 PF02861 Clp amino terminal domain, pathogenicity island component BMG03_08360 PF17871 AAA lid domain BMG03_08360 PF07724 AAA domain (Cdc48 subfamily) BMG03_08360 PF10431 C-terminal, D2-small domain, of ClpB protein BMG03_08360 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_08370 PF13181 Tetratricopeptide repeat BMG03_08380 PF13181 Tetratricopeptide repeat BMG03_08385 PF01810 LysE type translocator BMG03_08390 PF16123 Hydroxyacylglutathione hydrolase C-terminus BMG03_08390 PF00753 Metallo-beta-lactamase superfamily BMG03_08395 PF08241 Methyltransferase domain BMG03_08400 PF00213 ATP synthase delta (OSCP) subunit BMG03_08405 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_08405 PF00306 ATP synthase alpha/beta chain, C terminal domain BMG03_08410 PF00231 ATP synthase BMG03_08415 PF02874 ATP synthase alpha/beta family, beta-barrel domain BMG03_08415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BMG03_08420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BMG03_08425 PF09458 H-type lectin domain BMG03_08430 PF00171 Aldehyde dehydrogenase family BMG03_08440 PF00571 CBS domain BMG03_08445 PF01467 Cytidylyltransferase-like BMG03_08450 PF10938 YfdX protein BMG03_08455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMG03_08455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMG03_08460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMG03_08460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMG03_08465 PF01706 FliG C-terminal domain BMG03_08465 PF14841 FliG middle domain BMG03_08465 PF14842 FliG N-terminal domain BMG03_08470 PF10397 Adenylosuccinate lyase C-terminus BMG03_08470 PF00206 Lyase BMG03_08490 PF02397 Bacterial sugar transferase BMG03_08495 PF00149 Calcineurin-like phosphoesterase BMG03_08520 PF01471 Putative peptidoglycan binding domain BMG03_08520 PF13401 AAA domain BMG03_08540 PF01575 MaoC like domain BMG03_08545 PF01687 Riboflavin kinase BMG03_08545 PF06574 FAD synthetase BMG03_08550 PF03692 Putative zinc- or iron-chelating domain BMG03_08555 PF01212 Beta-eliminating lyase BMG03_08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_08575 PF01037 Lrp/AsnC ligand binding domain BMG03_08580 PF07690 Major Facilitator Superfamily BMG03_08585 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain BMG03_08585 PF00730 HhH-GPD superfamily base excision DNA repair protein BMG03_08600 PF00916 Sulfate permease family BMG03_08600 PF01740 STAS domain BMG03_08610 PF02607 B12 binding domain BMG03_08610 PF02310 B12 binding domain BMG03_08615 PF04055 Radical SAM superfamily BMG03_08630 PF01259 SAICAR synthetase BMG03_08635 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BMG03_08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_08645 PF02743 Cache domain BMG03_08645 PF00512 His Kinase A (phospho-acceptor) domain BMG03_08650 PF02954 Bacterial regulatory protein, Fis family BMG03_08650 PF00158 Sigma-54 interaction domain BMG03_08650 PF00072 Response regulator receiver domain BMG03_08655 PF10150 Ribonuclease E/G family BMG03_08655 PF00575 S1 RNA binding domain BMG03_08655 PF12111 Polyribonucleotide phosphorylase C terminal BMG03_08660 PF00885 6,7-dimethyl-8-ribityllumazine synthase BMG03_08665 PF01206 Sulfurtransferase TusA BMG03_08670 PF02683 Cytochrome C biogenesis protein transmembrane region BMG03_08690 PF00106 short chain dehydrogenase BMG03_08700 PF00472 RF-1 domain BMG03_08700 PF03462 PCRF domain BMG03_08705 PF00121 Triosephosphate isomerase BMG03_08710 PF01521 Iron-sulphur cluster biosynthesis BMG03_08725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMG03_08730 PF01883 Iron-sulfur cluster assembly protein BMG03_08735 PF00472 RF-1 domain BMG03_08735 PF03462 PCRF domain BMG03_08740 PF05175 Methyltransferase small domain BMG03_08740 PF17827 PrmC N-terminal domain BMG03_08750 PF00398 Ribosomal RNA adenine dimethylase BMG03_08755 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BMG03_08780 PF00883 Cytosol aminopeptidase family, catalytic domain BMG03_08805 PF01702 Queuine tRNA-ribosyltransferase BMG03_08810 PF03006 Haemolysin-III related BMG03_08815 PF00175 Oxidoreductase NAD-binding domain BMG03_08815 PF00970 Oxidoreductase FAD-binding domain BMG03_08825 PF01507 Phosphoadenosine phosphosulfate reductase family BMG03_08830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BMG03_08830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BMG03_08840 PF14824 Sirohaem biosynthesis protein central BMG03_08840 PF10414 Sirohaem synthase dimerisation region BMG03_08840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMG03_08845 PF01037 Lrp/AsnC ligand binding domain BMG03_08850 PF00067 Cytochrome P450 BMG03_08855 PF00512 His Kinase A (phospho-acceptor) domain BMG03_08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_08855 PF02743 Cache domain BMG03_08860 PF02954 Bacterial regulatory protein, Fis family BMG03_08860 PF00158 Sigma-54 interaction domain BMG03_08860 PF00072 Response regulator receiver domain BMG03_08865 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_08870 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BMG03_08875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_08885 PF01551 Peptidase family M23 BMG03_08885 PF01476 LysM domain BMG03_08885 PF08525 Opacity-associated protein A N-terminal motif BMG03_08890 PF00578 AhpC/TSA family BMG03_08900 PF02547 Queuosine biosynthesis protein BMG03_08905 PF07690 Major Facilitator Superfamily BMG03_08915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_08920 PF01435 Peptidase family M48 BMG03_08930 PF17760 UvrA interaction domain BMG03_08930 PF17755 UvrA DNA-binding domain BMG03_08955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_08955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_08960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMG03_08960 PF00378 Enoyl-CoA hydratase/isomerase BMG03_08960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMG03_08970 PF08125 Mannitol dehydrogenase C-terminal domain BMG03_08970 PF01232 Mannitol dehydrogenase Rossmann domain BMG03_08980 PF00005 ABC transporter BMG03_08980 PF08402 TOBE domain BMG03_08985 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_08990 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09000 PF04198 Putative sugar-binding domain BMG03_09005 PF13419 Haloacid dehalogenase-like hydrolase BMG03_09015 PF00118 TCP-1/cpn60 chaperonin family BMG03_09020 PF00166 Chaperonin 10 Kd subunit BMG03_09030 PF02833 DHHA2 domain BMG03_09030 PF01368 DHH family BMG03_09035 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BMG03_09035 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BMG03_09045 PF00027 Cyclic nucleotide-binding domain BMG03_09045 PF13545 Crp-like helix-turn-helix domain BMG03_09055 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BMG03_09055 PF06481 COX Aromatic Rich Motif BMG03_09060 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_09065 PF00510 Cytochrome c oxidase subunit III BMG03_09080 PF05951 Bacterial protein of unknown function (DUF882) BMG03_09090 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BMG03_09090 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_09095 PF00550 Phosphopantetheine attachment site BMG03_09100 PF02801 Beta-ketoacyl synthase, C-terminal domain BMG03_09100 PF00109 Beta-ketoacyl synthase, N-terminal domain BMG03_09110 PF05872 Bacterial protein of unknown function (DUF853) BMG03_09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_09125 PF03466 LysR substrate binding domain BMG03_09130 PF08534 Redoxin BMG03_09135 PF04055 Radical SAM superfamily BMG03_09135 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BMG03_09145 PF00455 DeoR C terminal sensor domain BMG03_09145 PF08220 DeoR-like helix-turn-helix domain BMG03_09150 PF01614 Bacterial transcriptional regulator BMG03_09150 PF09339 IclR helix-turn-helix domain BMG03_09155 PF01144 Coenzyme A transferase BMG03_09160 PF01144 Coenzyme A transferase BMG03_09175 PF00512 His Kinase A (phospho-acceptor) domain BMG03_09175 PF08521 Two-component sensor kinase N-terminal BMG03_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_09180 PF00072 Response regulator receiver domain BMG03_09180 PF00486 Transcriptional regulatory protein, C terminal BMG03_09195 PF01970 Tripartite tricarboxylate transporter TctA family BMG03_09210 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMG03_09210 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMG03_09215 PF13426 PAS domain BMG03_09215 PF13188 PAS domain BMG03_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_09230 PF03170 Bacterial cellulose synthase subunit BMG03_09230 PF03552 Cellulose synthase BMG03_09230 PF00535 Glycosyl transferase family 2 BMG03_09230 PF07238 PilZ domain BMG03_09240 PF01738 Dienelactone hydrolase family BMG03_09245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMG03_09245 PF00205 Thiamine pyrophosphate enzyme, central domain BMG03_09245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMG03_09255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_09255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMG03_09265 PF00296 Luciferase-like monooxygenase BMG03_09270 PF00248 Aldo/keto reductase family BMG03_09275 PF01613 Flavin reductase like domain BMG03_09285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_09290 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_09300 PF03773 Predicted permease BMG03_09310 PF04321 RmlD substrate binding domain BMG03_09315 PF01758 Sodium Bile acid symporter family BMG03_09335 PF00571 CBS domain BMG03_09335 PF02163 Peptidase family M50 BMG03_09340 PF12706 Beta-lactamase superfamily domain BMG03_09345 PF00850 Histone deacetylase domain BMG03_09355 PF13193 AMP-binding enzyme C-terminal domain BMG03_09355 PF00501 AMP-binding enzyme BMG03_09360 PF07690 Major Facilitator Superfamily BMG03_09365 PF00690 Cation transporter/ATPase, N-terminus BMG03_09365 PF00689 Cation transporting ATPase, C-terminus BMG03_09370 PF00561 alpha/beta hydrolase fold BMG03_09380 PF00266 Aminotransferase class-V BMG03_09385 PF03466 LysR substrate binding domain BMG03_09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_09390 PF01965 DJ-1/PfpI family BMG03_09395 PF00106 short chain dehydrogenase BMG03_09400 PF00873 AcrB/AcrD/AcrF family BMG03_09410 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BMG03_09415 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09420 PF00005 ABC transporter BMG03_09425 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09430 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_09435 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09440 PF00005 ABC transporter BMG03_09445 PF00268 Ribonucleotide reductase, small chain BMG03_09450 PF00317 Ribonucleotide reductase, all-alpha domain BMG03_09450 PF08343 Ribonucleotide reductase N-terminal BMG03_09450 PF02867 Ribonucleotide reductase, barrel domain BMG03_09455 PF07972 NrdI Flavodoxin like BMG03_09460 PF00462 Glutaredoxin BMG03_09465 PF02310 B12 binding domain BMG03_09465 PF02607 B12 binding domain BMG03_09465 PF02574 Homocysteine S-methyltransferase BMG03_09465 PF02965 Vitamin B12 dependent methionine synthase, activation domain BMG03_09465 PF00809 Pterin binding enzyme BMG03_09475 PF00391 PEP-utilising enzyme, mobile domain BMG03_09475 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMG03_09475 PF02896 PEP-utilising enzyme, TIM barrel domain BMG03_09480 PF00005 ABC transporter BMG03_09480 PF08402 TOBE domain BMG03_09485 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09495 PF01547 Bacterial extracellular solute-binding protein BMG03_09500 PF00690 Cation transporter/ATPase, N-terminus BMG03_09500 PF00689 Cation transporting ATPase, C-terminus BMG03_09505 PF00501 AMP-binding enzyme BMG03_09505 PF13193 AMP-binding enzyme C-terminal domain BMG03_09510 PF00364 Biotin-requiring enzyme BMG03_09510 PF02779 Transketolase, pyrimidine binding domain BMG03_09510 PF02780 Transketolase, C-terminal domain BMG03_09515 PF00364 Biotin-requiring enzyme BMG03_09515 PF02817 e3 binding domain BMG03_09515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMG03_09520 PF00550 Phosphopantetheine attachment site BMG03_09540 PF03466 LysR substrate binding domain BMG03_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_09545 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_09550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BMG03_09560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BMG03_09565 PF00005 ABC transporter BMG03_09570 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09580 PF08386 TAP-like protein BMG03_09580 PF00561 alpha/beta hydrolase fold BMG03_09595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BMG03_09595 PF00753 Metallo-beta-lactamase superfamily BMG03_09595 PF10996 Beta-Casp domain BMG03_09610 PF08448 PAS fold BMG03_09610 PF13188 PAS domain BMG03_09610 PF00072 Response regulator receiver domain BMG03_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_09610 PF00512 His Kinase A (phospho-acceptor) domain BMG03_09615 PF01740 STAS domain BMG03_09615 PF08678 Rsbr N terminal BMG03_09620 PF01740 STAS domain BMG03_09650 PF00753 Metallo-beta-lactamase superfamily BMG03_09650 PF16123 Hydroxyacylglutathione hydrolase C-terminus BMG03_09655 PF00672 HAMP domain BMG03_09655 PF00512 His Kinase A (phospho-acceptor) domain BMG03_09655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_09660 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_09660 PF05362 Lon protease (S16) C-terminal proteolytic domain BMG03_09660 PF02190 ATP-dependent protease La (LON) substrate-binding domain BMG03_09675 PF16867 Dimethlysulfonioproprionate lyase BMG03_09685 PF05726 Pirin C-terminal cupin domain BMG03_09685 PF02678 Pirin BMG03_09705 PF00171 Aldehyde dehydrogenase family BMG03_09710 PF10090 Histidine phosphotransferase C-terminal domain BMG03_09740 PF00579 tRNA synthetases class I (W and Y) BMG03_09745 PF03702 Anhydro-N-acetylmuramic acid kinase BMG03_09760 PF13419 Haloacid dehalogenase-like hydrolase BMG03_09765 PF00113 Enolase, C-terminal TIM barrel domain BMG03_09765 PF03952 Enolase, N-terminal domain BMG03_09770 PF00892 EamA-like transporter family BMG03_09780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BMG03_09785 PF01594 AI-2E family transporter BMG03_09805 PF00072 Response regulator receiver domain BMG03_09805 PF00196 Bacterial regulatory proteins, luxR family BMG03_09810 PF00557 Metallopeptidase family M24 BMG03_09810 PF01321 Creatinase/Prolidase N-terminal domain BMG03_09815 PF01220 Dehydroquinase class II BMG03_09840 PF01738 Dienelactone hydrolase family BMG03_09840 PF00156 Phosphoribosyl transferase domain BMG03_09870 PF00072 Response regulator receiver domain BMG03_09870 PF00486 Transcriptional regulatory protein, C terminal BMG03_09875 PF00512 His Kinase A (phospho-acceptor) domain BMG03_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_09885 PF00027 Cyclic nucleotide-binding domain BMG03_09885 PF13545 Crp-like helix-turn-helix domain BMG03_09890 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BMG03_09890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMG03_09900 PF00491 Arginase family BMG03_09915 PF00005 ABC transporter BMG03_09940 PF00005 ABC transporter BMG03_09940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_09950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_09955 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_09960 PF12911 N-terminal TM domain of oligopeptide transport permease C BMG03_09960 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_10070 PF00106 short chain dehydrogenase BMG03_10080 PF00440 Bacterial regulatory proteins, tetR family BMG03_10080 PF02909 Tetracyclin repressor-like, C-terminal domain BMG03_10085 PF03976 Polyphosphate kinase 2 (PPK2) BMG03_10090 PF00561 alpha/beta hydrolase fold BMG03_10095 PF04204 Homoserine O-succinyltransferase BMG03_10105 PF00892 EamA-like transporter family BMG03_10135 PF00478 IMP dehydrogenase / GMP reductase domain BMG03_10135 PF00571 CBS domain BMG03_10145 PF00211 Adenylate and Guanylate cyclase catalytic domain BMG03_10155 PF02817 e3 binding domain BMG03_10155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMG03_10155 PF00364 Biotin-requiring enzyme BMG03_10160 PF00171 Aldehyde dehydrogenase family BMG03_10165 PF02780 Transketolase, C-terminal domain BMG03_10165 PF00364 Biotin-requiring enzyme BMG03_10165 PF02779 Transketolase, pyrimidine binding domain BMG03_10170 PF02780 Transketolase, C-terminal domain BMG03_10170 PF02779 Transketolase, pyrimidine binding domain BMG03_10175 PF00676 Dehydrogenase E1 component BMG03_10195 PF13407 Periplasmic binding protein domain BMG03_10205 PF02653 Branched-chain amino acid transport system / permease component BMG03_10210 PF02653 Branched-chain amino acid transport system / permease component BMG03_10215 PF00005 ABC transporter BMG03_10220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_10220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_10235 PF00293 NUDIX domain BMG03_10240 PF00571 CBS domain BMG03_10240 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_10245 PF12794 Mechanosensitive ion channel inner membrane domain 1 BMG03_10245 PF00924 Mechanosensitive ion channel BMG03_10245 PF12795 Mechanosensitive ion channel porin domain BMG03_10250 PF01411 tRNA synthetases class II (A) BMG03_10250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMG03_10250 PF02272 DHHA1 domain BMG03_10255 PF00206 Lyase BMG03_10255 PF10415 Fumarase C C-terminus BMG03_10300 PF13416 Bacterial extracellular solute-binding protein BMG03_10305 PF00875 DNA photolyase BMG03_10305 PF03441 FAD binding domain of DNA photolyase BMG03_10315 PF01050 Mannose-6-phosphate isomerase BMG03_10315 PF00483 Nucleotidyl transferase BMG03_10320 PF06082 Exopolysaccharide biosynthesis protein YbjH BMG03_10335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BMG03_10335 PF00953 Glycosyl transferase family 4 BMG03_10340 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BMG03_10340 PF10531 SLBB domain BMG03_10340 PF02563 Polysaccharide biosynthesis/export protein BMG03_10345 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMG03_10350 PF02706 Chain length determinant protein BMG03_10350 PF13614 AAA domain BMG03_10350 PF13807 G-rich domain on putative tyrosine kinase BMG03_10365 PF01189 16S rRNA methyltransferase RsmB/F BMG03_10365 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BMG03_10365 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BMG03_10370 PF00072 Response regulator receiver domain BMG03_10370 PF13188 PAS domain BMG03_10370 PF08448 PAS fold BMG03_10370 PF00512 His Kinase A (phospho-acceptor) domain BMG03_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_10380 PF00154 recA bacterial DNA recombination protein BMG03_10385 PF02272 DHHA1 domain BMG03_10385 PF01411 tRNA synthetases class II (A) BMG03_10385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMG03_10395 PF01406 tRNA synthetases class I (C) catalytic domain BMG03_10395 PF09190 DALR domain BMG03_10400 PF00682 HMGL-like BMG03_10400 PF08502 LeuA allosteric (dimerisation) domain BMG03_10415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMG03_10415 PF02203 Tar ligand binding domain homologue BMG03_10415 PF00672 HAMP domain BMG03_10420 PF01339 CheB methylesterase BMG03_10420 PF00072 Response regulator receiver domain BMG03_10425 PF03975 CheD chemotactic sensory transduction BMG03_10435 PF00072 Response regulator receiver domain BMG03_10445 PF01584 CheW-like domain BMG03_10450 PF01584 CheW-like domain BMG03_10450 PF02895 Signal transducing histidine kinase, homodimeric domain BMG03_10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_10450 PF01627 Hpt domain BMG03_10465 PF02685 Glucokinase BMG03_10470 PF00232 Glycosyl hydrolase family 1 BMG03_10475 PF00356 Bacterial regulatory proteins, lacI family BMG03_10480 PF01547 Bacterial extracellular solute-binding protein BMG03_10485 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_10490 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_10495 PF00128 Alpha amylase, catalytic domain BMG03_10500 PF17912 MalK OB fold domain BMG03_10500 PF00005 ABC transporter BMG03_10500 PF03459 TOBE domain BMG03_10515 PF02540 NAD synthase BMG03_10515 PF00117 Glutamine amidotransferase class-I BMG03_10515 PF00958 GMP synthase C terminal domain BMG03_10520 PF00571 CBS domain BMG03_10520 PF03471 Transporter associated domain BMG03_10520 PF01595 Cyclin M transmembrane N-terminal domain BMG03_10525 PF02899 Phage integrase, N-terminal SAM-like domain BMG03_10525 PF00589 Phage integrase family BMG03_10540 PF01202 Shikimate kinase BMG03_10545 PF01761 3-dehydroquinate synthase BMG03_10575 PF02384 N-6 DNA Methylase BMG03_10580 PF01420 Type I restriction modification DNA specificity domain BMG03_10595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BMG03_10595 PF11867 Domain of unknown function (DUF3387) BMG03_10595 PF18766 SWI2/SNF2 ATPase BMG03_10610 PF13683 Integrase core domain BMG03_10610 PF13276 HTH-like domain BMG03_10615 PF01527 Transposase BMG03_10625 PF01207 Dihydrouridine synthase (Dus) BMG03_10630 PF01925 Sulfite exporter TauE/SafE BMG03_10635 PF03819 MazG nucleotide pyrophosphohydrolase domain BMG03_10640 PF07687 Peptidase dimerisation domain BMG03_10640 PF01546 Peptidase family M20/M25/M40 BMG03_10645 PF02699 Preprotein translocase subunit BMG03_10650 PF02355 Protein export membrane protein BMG03_10655 PF07549 SecD/SecF GG Motif BMG03_10655 PF02355 Protein export membrane protein BMG03_10660 PF04430 Protein of unknown function (DUF498/DUF598) BMG03_10665 PF00005 ABC transporter BMG03_10670 PF03379 CcmB protein BMG03_10675 PF01578 Cytochrome C assembly protein BMG03_10685 PF08534 Redoxin BMG03_10690 PF00436 Single-strand binding protein family BMG03_10710 PF01551 Peptidase family M23 BMG03_10710 PF10145 Phage-related minor tail protein BMG03_10710 PF01464 Transglycosylase SLT domain BMG03_10720 PF00490 Delta-aminolevulinic acid dehydratase BMG03_10730 PF02559 CarD-like/TRCF domain BMG03_10730 PF00270 DEAD/DEAH box helicase BMG03_10730 PF00271 Helicase conserved C-terminal domain BMG03_10730 PF03461 TRCF domain BMG03_10730 PF17757 UvrB interaction domain BMG03_10740 PF07690 Major Facilitator Superfamily BMG03_10750 PF00501 AMP-binding enzyme BMG03_10750 PF13193 AMP-binding enzyme C-terminal domain BMG03_10760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_10770 PF00072 Response regulator receiver domain BMG03_10770 PF00196 Bacterial regulatory proteins, luxR family BMG03_10785 PF00664 ABC transporter transmembrane region BMG03_10785 PF00005 ABC transporter BMG03_10795 PF00529 HlyD membrane-fusion protein of T1SS BMG03_10795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_10805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BMG03_10805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BMG03_10815 PF01569 PAP2 superfamily BMG03_10820 PF03706 Lysylphosphatidylglycerol synthase TM region BMG03_10820 PF09924 Uncharacterised conserved protein (DUF2156) BMG03_10825 PF00128 Alpha amylase, catalytic domain BMG03_10830 PF00343 Carbohydrate phosphorylase BMG03_10835 PF00128 Alpha amylase, catalytic domain BMG03_10835 PF02806 Alpha amylase, C-terminal all-beta domain BMG03_10835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMG03_10840 PF00483 Nucleotidyl transferase BMG03_10845 PF00534 Glycosyl transferases group 1 BMG03_10845 PF08323 Starch synthase catalytic domain BMG03_10850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BMG03_10850 PF18390 Glycogen debranching enzyme C-terminal domain BMG03_10850 PF00128 Alpha amylase, catalytic domain BMG03_10855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BMG03_10855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BMG03_10855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BMG03_10855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BMG03_10860 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_10860 PF00107 Zinc-binding dehydrogenase BMG03_10865 PF03466 LysR substrate binding domain BMG03_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_10870 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BMG03_10875 PF00485 Phosphoribulokinase / Uridine kinase family BMG03_10880 PF02779 Transketolase, pyrimidine binding domain BMG03_10880 PF00456 Transketolase, thiamine diphosphate binding domain BMG03_10880 PF02780 Transketolase, C-terminal domain BMG03_10885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMG03_10885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMG03_10890 PF01116 Fructose-bisphosphate aldolase class-II BMG03_10895 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BMG03_10895 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BMG03_10900 PF00101 Ribulose bisphosphate carboxylase, small chain BMG03_10905 PF08406 CbbQ/NirQ/NorQ C-terminal BMG03_10905 PF07728 AAA domain (dynein-related subfamily) BMG03_10915 PF00834 Ribulose-phosphate 3 epimerase family BMG03_10935 PF13419 Haloacid dehalogenase-like hydrolase BMG03_10940 PF13419 Haloacid dehalogenase-like hydrolase BMG03_10945 PF00753 Metallo-beta-lactamase superfamily BMG03_10955 PF01740 STAS domain BMG03_10955 PF00916 Sulfate permease family BMG03_10960 PF03472 Autoinducer binding domain BMG03_10960 PF00196 Bacterial regulatory proteins, luxR family BMG03_10965 PF00889 Elongation factor TS BMG03_10975 PF16360 GTP-binding GTPase Middle Region BMG03_10975 PF13167 GTP-binding GTPase N-terminal BMG03_10975 PF01926 50S ribosome-binding GTPase BMG03_10980 PF17209 Hfq protein BMG03_10985 PF02386 Cation transport protein BMG03_10990 PF02254 TrkA-N domain BMG03_10990 PF02080 TrkA-C domain BMG03_10995 PF04185 Phosphoesterase family BMG03_11000 PF03150 Di-haem cytochrome c peroxidase BMG03_11005 PF00535 Glycosyl transferase family 2 BMG03_11015 PF00005 ABC transporter BMG03_11015 PF08402 TOBE domain BMG03_11020 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_11025 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_11030 PF00155 Aminotransferase class I and II BMG03_11030 PF00392 Bacterial regulatory proteins, gntR family BMG03_11055 PF04228 Putative neutral zinc metallopeptidase BMG03_11060 PF09335 SNARE associated Golgi protein BMG03_11075 PF04227 Indigoidine synthase A like protein BMG03_11090 PF00266 Aminotransferase class-V BMG03_11105 PF01458 Uncharacterized protein family (UPF0051) BMG03_11110 PF00005 ABC transporter BMG03_11115 PF01906 Putative heavy-metal-binding BMG03_11125 PF01458 Uncharacterized protein family (UPF0051) BMG03_11130 PF00266 Aminotransferase class-V BMG03_11135 PF02082 Transcriptional regulator BMG03_11140 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BMG03_11160 PF03971 Monomeric isocitrate dehydrogenase BMG03_11165 PF00180 Isocitrate/isopropylmalate dehydrogenase BMG03_11175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BMG03_11175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BMG03_11185 PF00893 Small Multidrug Resistance protein BMG03_11195 PF00521 DNA gyrase/topoisomerase IV, subunit A BMG03_11195 PF03989 DNA gyrase C-terminal domain, beta-propeller BMG03_11200 PF02028 BCCT, betaine/carnitine/choline family transporter BMG03_11205 PF01134 Glucose inhibited division protein A BMG03_11215 PF00749 tRNA synthetases class I (E and Q), catalytic domain BMG03_11220 PF01502 Phosphoribosyl-AMP cyclohydrolase BMG03_11230 PF00270 DEAD/DEAH box helicase BMG03_11230 PF00271 Helicase conserved C-terminal domain BMG03_11230 PF17191 RecG wedge domain BMG03_11235 PF00533 BRCA1 C Terminus (BRCT) domain BMG03_11235 PF03120 NAD-dependent DNA ligase OB-fold domain BMG03_11235 PF01653 NAD-dependent DNA ligase adenylation domain BMG03_11235 PF12826 Helix-hairpin-helix motif BMG03_11235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BMG03_11240 PF00486 Transcriptional regulatory protein, C terminal BMG03_11240 PF00072 Response regulator receiver domain BMG03_11265 PF04675 DNA ligase N terminus BMG03_11265 PF01068 ATP dependent DNA ligase domain BMG03_11265 PF04679 ATP dependent DNA ligase C terminal region BMG03_11270 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BMG03_11270 PF00561 alpha/beta hydrolase fold BMG03_11275 PF07690 Major Facilitator Superfamily BMG03_11280 PF01037 Lrp/AsnC ligand binding domain BMG03_11285 PF00171 Aldehyde dehydrogenase family BMG03_11290 PF00202 Aminotransferase class-III BMG03_11300 PF02684 Lipid-A-disaccharide synthetase BMG03_11305 PF17930 LpxI N-terminal domain BMG03_11305 PF06230 LpxI C-terminal domain BMG03_11310 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_11310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BMG03_11315 PF07977 FabA-like domain BMG03_11325 PF07244 Surface antigen variable number repeat BMG03_11325 PF01103 Surface antigen BMG03_11330 PF02163 Peptidase family M50 BMG03_11330 PF17820 PDZ domain BMG03_11335 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BMG03_11335 PF13288 DXP reductoisomerase C-terminal domain BMG03_11335 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BMG03_11345 PF01255 Putative undecaprenyl diphosphate synthase BMG03_11350 PF01765 Ribosome recycling factor BMG03_11355 PF00696 Amino acid kinase family BMG03_11370 PF00672 HAMP domain BMG03_11370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMG03_11375 PF00171 Aldehyde dehydrogenase family BMG03_11385 PF01728 FtsJ-like methyltransferase BMG03_11390 PF02541 Ppx/GppA phosphatase family BMG03_11395 PF00989 PAS fold BMG03_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_11395 PF00512 His Kinase A (phospho-acceptor) domain BMG03_11395 PF16736 Single Cache-like BMG03_11405 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_11410 PF00625 Guanylate kinase BMG03_11415 PF03755 YicC-like family, N-terminal region BMG03_11415 PF08340 Domain of unknown function (DUF1732) BMG03_11425 PF01474 Class-II DAHP synthetase family BMG03_11430 PF01965 DJ-1/PfpI family BMG03_11430 PF12833 Helix-turn-helix domain BMG03_11440 PF00005 ABC transporter BMG03_11440 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMG03_11445 PF00005 ABC transporter BMG03_11450 PF02653 Branched-chain amino acid transport system / permease component BMG03_11460 PF00158 Sigma-54 interaction domain BMG03_11460 PF02954 Bacterial regulatory protein, Fis family BMG03_11460 PF00072 Response regulator receiver domain BMG03_11465 PF00672 HAMP domain BMG03_11465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_11470 PF14532 Sigma-54 interaction domain BMG03_11470 PF00072 Response regulator receiver domain BMG03_11470 PF02954 Bacterial regulatory protein, Fis family BMG03_11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_11475 PF00512 His Kinase A (phospho-acceptor) domain BMG03_11480 PF01207 Dihydrouridine synthase (Dus) BMG03_11485 PF02542 YgbB family BMG03_11485 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BMG03_11490 PF04608 Phosphatidylglycerophosphatase A BMG03_11495 PF00994 Probable molybdopterin binding domain BMG03_11495 PF18146 Damage-inducible protein CinA KH domain BMG03_11495 PF02464 Competence-damaged protein BMG03_11500 PF00909 Ammonium Transporter Family BMG03_11505 PF03364 Polyketide cyclase / dehydrase and lipid transport BMG03_11520 PF02653 Branched-chain amino acid transport system / permease component BMG03_11525 PF02653 Branched-chain amino acid transport system / permease component BMG03_11530 PF00005 ABC transporter BMG03_11535 PF00005 ABC transporter BMG03_11535 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMG03_11545 PF03466 LysR substrate binding domain BMG03_11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_11555 PF02219 Methylenetetrahydrofolate reductase BMG03_11560 PF00809 Pterin binding enzyme BMG03_11560 PF02310 B12 binding domain BMG03_11560 PF02574 Homocysteine S-methyltransferase BMG03_11560 PF02965 Vitamin B12 dependent methionine synthase, activation domain BMG03_11560 PF02607 B12 binding domain BMG03_11595 PF00067 Cytochrome P450 BMG03_11600 PF00485 Phosphoribulokinase / Uridine kinase family BMG03_11605 PF02581 Thiamine monophosphate synthase BMG03_11610 PF00588 SpoU rRNA Methylase family BMG03_11620 PF00842 Alanine racemase, C-terminal domain BMG03_11620 PF01168 Alanine racemase, N-terminal domain BMG03_11625 PF02405 Permease MlaE BMG03_11630 PF00005 ABC transporter BMG03_11650 PF00011 Hsp20/alpha crystallin family BMG03_11660 PF00731 AIR carboxylase BMG03_11665 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BMG03_11665 PF02222 ATP-grasp domain BMG03_11670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMG03_11680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_11680 PF03466 LysR substrate binding domain BMG03_11700 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_11705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BMG03_11715 PF00216 Bacterial DNA-binding protein BMG03_11720 PF00575 S1 RNA binding domain BMG03_11725 PF00255 Glutathione peroxidase BMG03_11735 PF02224 Cytidylate kinase BMG03_11740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BMG03_11745 PF02390 Putative methyltransferase BMG03_11755 PF02773 S-adenosylmethionine synthetase, C-terminal domain BMG03_11755 PF02772 S-adenosylmethionine synthetase, central domain BMG03_11755 PF00438 S-adenosylmethionine synthetase, N-terminal domain BMG03_11760 PF00795 Carbon-nitrogen hydrolase BMG03_11765 PF00571 CBS domain BMG03_11765 PF03471 Transporter associated domain BMG03_11770 PF02130 Uncharacterized protein family UPF0054 BMG03_11780 PF00849 RNA pseudouridylate synthase BMG03_11785 PF13396 Phospholipase_D-nuclease N-terminal BMG03_11785 PF13091 PLD-like domain BMG03_11790 PF00140 Sigma-70 factor, region 1.2 BMG03_11790 PF04542 Sigma-70 region 2 BMG03_11790 PF04545 Sigma-70, region 4 BMG03_11795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_11795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMG03_11800 PF01226 Formate/nitrite transporter BMG03_11810 PF03167 Uracil DNA glycosylase superfamily BMG03_11815 PF00005 ABC transporter BMG03_11825 PF00793 DAHP synthetase I family BMG03_11830 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMG03_11840 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_11860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMG03_11870 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_11875 PF00005 ABC transporter BMG03_11875 PF03459 TOBE domain BMG03_11880 PF00171 Aldehyde dehydrogenase family BMG03_11880 PF14850 DNA-binding domain of Proline dehydrogenase BMG03_11880 PF01619 Proline dehydrogenase BMG03_11880 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BMG03_11885 PF01037 Lrp/AsnC ligand binding domain BMG03_11885 PF13404 AsnC-type helix-turn-helix domain BMG03_11890 PF00149 Calcineurin-like phosphoesterase BMG03_11890 PF02872 5'-nucleotidase, C-terminal domain BMG03_11895 PF01926 50S ribosome-binding GTPase BMG03_11895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BMG03_11900 PF00350 Dynamin family BMG03_11905 PF00350 Dynamin family BMG03_11910 PF00350 Dynamin family BMG03_11920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMG03_11920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMG03_11930 PF00501 AMP-binding enzyme BMG03_11930 PF13193 AMP-binding enzyme C-terminal domain BMG03_11935 PF00378 Enoyl-CoA hydratase/isomerase BMG03_11940 PF00005 ABC transporter BMG03_11940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_11945 PF00005 ABC transporter BMG03_11945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BMG03_11950 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_11950 PF12911 N-terminal TM domain of oligopeptide transport permease C BMG03_11955 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_11960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BMG03_11965 PF08379 Bacterial transglutaminase-like N-terminal region BMG03_11965 PF01841 Transglutaminase-like superfamily BMG03_11970 PF04168 A predicted alpha-helical domain with a conserved ER motif. BMG03_11970 PF14403 Circularly permuted ATP-grasp type 2 BMG03_11980 PF13416 Bacterial extracellular solute-binding protein BMG03_11990 PF01156 Inosine-uridine preferring nucleoside hydrolase BMG03_11995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BMG03_12000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BMG03_12005 PF00162 Phosphoglycerate kinase BMG03_12010 PF00274 Fructose-bisphosphate aldolase class-I BMG03_12015 PF00072 Response regulator receiver domain BMG03_12020 PF01627 Hpt domain BMG03_12020 PF02895 Signal transducing histidine kinase, homodimeric domain BMG03_12020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_12020 PF01584 CheW-like domain BMG03_12020 PF09078 CheY binding BMG03_12025 PF01584 CheW-like domain BMG03_12030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BMG03_12030 PF00672 HAMP domain BMG03_12030 PF02203 Tar ligand binding domain homologue BMG03_12035 PF01584 CheW-like domain BMG03_12040 PF01739 CheR methyltransferase, SAM binding domain BMG03_12040 PF03705 CheR methyltransferase, all-alpha domain BMG03_12045 PF01339 CheB methylesterase BMG03_12045 PF00072 Response regulator receiver domain BMG03_12065 PF00676 Dehydrogenase E1 component BMG03_12070 PF00364 Biotin-requiring enzyme BMG03_12070 PF02780 Transketolase, C-terminal domain BMG03_12070 PF02779 Transketolase, pyrimidine binding domain BMG03_12075 PF00364 Biotin-requiring enzyme BMG03_12075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BMG03_12075 PF02817 e3 binding domain BMG03_12080 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_12080 PF06426 Serine acetyltransferase, N-terminal BMG03_12155 PF04860 Phage portal protein BMG03_12170 PF02618 YceG-like family BMG03_12175 PF02801 Beta-ketoacyl synthase, C-terminal domain BMG03_12175 PF00109 Beta-ketoacyl synthase, N-terminal domain BMG03_12180 PF00072 Response regulator receiver domain BMG03_12180 PF00990 Diguanylate cyclase, GGDEF domain BMG03_12190 PF00550 Phosphopantetheine attachment site BMG03_12200 PF00698 Acyl transferase domain BMG03_12205 PF12464 Maltose acetyltransferase BMG03_12205 PF14602 Hexapeptide repeat of succinyl-transferase BMG03_12215 PF00120 Glutamine synthetase, catalytic domain BMG03_12215 PF03951 Glutamine synthetase, beta-Grasp domain BMG03_12220 PF00543 Nitrogen regulatory protein P-II BMG03_12225 PF01256 Carbohydrate kinase BMG03_12225 PF03853 YjeF-related protein N-terminus BMG03_12235 PF13545 Crp-like helix-turn-helix domain BMG03_12235 PF00027 Cyclic nucleotide-binding domain BMG03_12240 PF13545 Crp-like helix-turn-helix domain BMG03_12240 PF00027 Cyclic nucleotide-binding domain BMG03_12250 PF05698 Bacterial trigger factor protein (TF) C-terminus BMG03_12250 PF05697 Bacterial trigger factor protein (TF) BMG03_12260 PF05698 Bacterial trigger factor protein (TF) C-terminus BMG03_12260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BMG03_12260 PF05697 Bacterial trigger factor protein (TF) BMG03_12270 PF03631 Virulence factor BrkB BMG03_12275 PF01281 Ribosomal protein L9, N-terminal domain BMG03_12275 PF03948 Ribosomal protein L9, C-terminal domain BMG03_12280 PF01084 Ribosomal protein S18 BMG03_12285 PF01250 Ribosomal protein S6 BMG03_12295 PF00330 Aconitase family (aconitate hydratase) BMG03_12295 PF00694 Aconitase C-terminal domain BMG03_12305 PF00313 'Cold-shock' DNA-binding domain BMG03_12310 PF00561 alpha/beta hydrolase fold BMG03_12335 PF04143 Sulphur transport BMG03_12345 PF01645 Conserved region in glutamate synthase BMG03_12355 PF00005 ABC transporter BMG03_12360 PF01032 FecCD transport family BMG03_12370 PF00593 TonB dependent receptor BMG03_12370 PF07715 TonB-dependent Receptor Plug Domain BMG03_12385 PF00491 Arginase family BMG03_12390 PF02082 Transcriptional regulator BMG03_12400 PF00334 Nucleoside diphosphate kinase BMG03_12405 PF12848 ABC transporter BMG03_12405 PF00005 ABC transporter BMG03_12410 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BMG03_12415 PF02628 Cytochrome oxidase assembly protein BMG03_12420 PF00970 Oxidoreductase FAD-binding domain BMG03_12420 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_12420 PF00175 Oxidoreductase NAD-binding domain BMG03_12430 PF00707 Translation initiation factor IF-3, C-terminal domain BMG03_12430 PF05198 Translation initiation factor IF-3, N-terminal domain BMG03_12440 PF13460 NAD(P)H-binding BMG03_12460 PF01979 Amidohydrolase family BMG03_12465 PF00156 Phosphoribosyl transferase domain BMG03_12470 PF03796 DnaB-like helicase C terminal domain BMG03_12470 PF00772 DnaB-like helicase N terminal domain BMG03_12475 PF17092 Penicillin-binding protein OB-like domain BMG03_12475 PF00905 Penicillin binding protein transpeptidase domain BMG03_12475 PF00912 Transglycosylase BMG03_12480 PF11741 AMIN domain BMG03_12480 PF01520 N-acetylmuramoyl-L-alanine amidase BMG03_12500 PF04551 GcpE protein BMG03_12510 PF00155 Aminotransferase class I and II BMG03_12525 PF07731 Multicopper oxidase BMG03_12525 PF07732 Multicopper oxidase BMG03_12540 PF00376 MerR family regulatory protein BMG03_12540 PF09278 MerR, DNA binding BMG03_12545 PF04945 YHS domain BMG03_12555 PF00691 OmpA family BMG03_12555 PF01389 OmpA-like transmembrane domain BMG03_12565 PF04752 ChaC-like protein BMG03_12575 PF02153 Prephenate dehydrogenase BMG03_12580 PF00155 Aminotransferase class I and II BMG03_12585 PF01479 S4 domain BMG03_12585 PF00163 Ribosomal protein S4/S9 N-terminal domain BMG03_12590 PF13407 Periplasmic binding protein domain BMG03_12600 PF02653 Branched-chain amino acid transport system / permease component BMG03_12615 PF01527 Transposase BMG03_12620 PF13276 HTH-like domain BMG03_12620 PF13683 Integrase core domain BMG03_12630 PF02626 Carboxyltransferase domain, subdomain A and B BMG03_12640 PF00289 Biotin carboxylase, N-terminal domain BMG03_12640 PF02785 Biotin carboxylase C-terminal domain BMG03_12640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_12650 PF03746 LamB/YcsF family BMG03_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_12655 PF03466 LysR substrate binding domain BMG03_12660 PF02538 Hydantoinase B/oxoprolinase BMG03_12665 PF01968 Hydantoinase/oxoprolinase BMG03_12665 PF05378 Hydantoinase/oxoprolinase N-terminal region BMG03_12675 PF00710 Asparaginase, N-terminal BMG03_12675 PF17763 Glutaminase/Asparaginase C-terminal domain BMG03_12685 PF07683 Cobalamin synthesis protein cobW C-terminal domain BMG03_12685 PF02492 CobW/HypB/UreG, nucleotide-binding domain BMG03_12695 PF01522 Polysaccharide deacetylase BMG03_12700 PF08402 TOBE domain BMG03_12700 PF00005 ABC transporter BMG03_12725 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_12730 PF00005 ABC transporter BMG03_12730 PF08402 TOBE domain BMG03_12780 PF13683 Integrase core domain BMG03_12780 PF13276 HTH-like domain BMG03_12785 PF01527 Transposase BMG03_12810 PF00171 Aldehyde dehydrogenase family BMG03_12815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_12820 PF00920 Dehydratase family BMG03_12830 PF02653 Branched-chain amino acid transport system / permease component BMG03_12835 PF00005 ABC transporter BMG03_12840 PF13407 Periplasmic binding protein domain BMG03_12845 PF03466 LysR substrate binding domain BMG03_12845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_12850 PF03401 Tripartite tricarboxylate transporter family receptor BMG03_12860 PF01970 Tripartite tricarboxylate transporter TctA family BMG03_12865 PF13361 UvrD-like helicase C-terminal domain BMG03_12865 PF00580 UvrD/REP helicase N-terminal domain BMG03_12885 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX BMG03_12895 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX BMG03_12900 PF03062 MBOAT, membrane-bound O-acyltransferase family BMG03_12910 PF00483 Nucleotidyl transferase BMG03_12910 PF01050 Mannose-6-phosphate isomerase BMG03_12925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMG03_12925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMG03_12925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMG03_12930 PF00196 Bacterial regulatory proteins, luxR family BMG03_12930 PF00072 Response regulator receiver domain BMG03_12935 PF00196 Bacterial regulatory proteins, luxR family BMG03_12935 PF00072 Response regulator receiver domain BMG03_12945 PF00005 ABC transporter BMG03_12945 PF00571 CBS domain BMG03_12950 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_12960 PF00005 ABC transporter BMG03_12960 PF08402 TOBE domain BMG03_12970 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_12975 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_12985 PF00356 Bacterial regulatory proteins, lacI family BMG03_12990 PF02797 Chalcone and stilbene synthases, C-terminal domain BMG03_12990 PF00195 Chalcone and stilbene synthases, N-terminal domain BMG03_12995 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BMG03_13000 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_13010 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_13015 PF01494 FAD binding domain BMG03_13020 PF00206 Lyase BMG03_13020 PF10397 Adenylosuccinate lyase C-terminus BMG03_13025 PF05853 beta-keto acid cleavage enzyme BMG03_13030 PF00775 Dioxygenase BMG03_13035 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BMG03_13035 PF00775 Dioxygenase BMG03_13045 PF00561 alpha/beta hydrolase fold BMG03_13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_13050 PF03466 LysR substrate binding domain BMG03_13065 PF01554 MatE BMG03_13080 PF03466 LysR substrate binding domain BMG03_13080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_13085 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BMG03_13085 PF00355 Rieske [2Fe-2S] domain BMG03_13095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BMG03_13105 PF00394 Multicopper oxidase BMG03_13105 PF07732 Multicopper oxidase BMG03_13110 PF00127 Copper binding proteins, plastocyanin/azurin family BMG03_13125 PF00034 Cytochrome c BMG03_13130 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_13135 PF07728 AAA domain (dynein-related subfamily) BMG03_13135 PF08406 CbbQ/NirQ/NorQ C-terminal BMG03_13140 PF00092 von Willebrand factor type A domain BMG03_13165 PF00403 Heavy-metal-associated domain BMG03_13170 PF13411 MerR HTH family regulatory protein BMG03_13175 PF00083 Sugar (and other) transporter BMG03_13185 PF00175 Oxidoreductase NAD-binding domain BMG03_13185 PF00042 Globin BMG03_13185 PF00970 Oxidoreductase FAD-binding domain BMG03_13200 PF00534 Glycosyl transferases group 1 BMG03_13220 PF13683 Integrase core domain BMG03_13220 PF13276 HTH-like domain BMG03_13225 PF01527 Transposase BMG03_13265 PF01066 CDP-alcohol phosphatidyltransferase BMG03_13270 PF02666 Phosphatidylserine decarboxylase BMG03_13280 PF00210 Ferritin-like domain BMG03_13285 PF00380 Ribosomal protein S9/S16 BMG03_13290 PF00572 Ribosomal protein L13 BMG03_13295 PF03061 Thioesterase superfamily BMG03_13300 PF00378 Enoyl-CoA hydratase/isomerase BMG03_13305 PF00696 Amino acid kinase family BMG03_13305 PF01472 PUA domain BMG03_13310 PF01018 GTP1/OBG BMG03_13310 PF01926 50S ribosome-binding GTPase BMG03_13320 PF01016 Ribosomal L27 protein BMG03_13325 PF00829 Ribosomal prokaryotic L21 protein BMG03_13330 PF02515 CoA-transferase family III BMG03_13355 PF01783 Ribosomal L32p protein family BMG03_13360 PF02504 Fatty acid synthesis protein BMG03_13365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BMG03_13365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BMG03_13370 PF00216 Bacterial DNA-binding protein BMG03_13385 PF00692 dUTPase BMG03_13390 PF01494 FAD binding domain BMG03_13395 PF01258 Prokaryotic dksA/traR C4-type zinc finger BMG03_13400 PF07724 AAA domain (Cdc48 subfamily) BMG03_13400 PF10431 C-terminal, D2-small domain, of ClpB protein BMG03_13400 PF00004 ATPase family associated with various cellular activities (AAA) BMG03_13400 PF17871 AAA lid domain BMG03_13400 PF02861 Clp amino terminal domain, pathogenicity island component BMG03_13405 PF00248 Aldo/keto reductase family BMG03_13415 PF04079 Segregation and condensation complex subunit ScpB BMG03_13420 PF02616 Segregation and condensation protein ScpA BMG03_13425 PF00933 Glycosyl hydrolase family 3 N terminal domain BMG03_13435 PF00750 tRNA synthetases class I (R) BMG03_13435 PF05746 DALR anticodon binding domain BMG03_13435 PF03485 Arginyl tRNA synthetase N terminal domain BMG03_13445 PF01274 Malate synthase BMG03_13455 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BMG03_13455 PF11940 Domain of unknown function (DUF3458) Ig-like fold BMG03_13455 PF01433 Peptidase family M1 domain BMG03_13465 PF02637 GatB domain BMG03_13465 PF02934 GatB/GatE catalytic domain BMG03_13470 PF05661 Protein of unknown function (DUF808) BMG03_13485 PF08378 Nuclease-related domain BMG03_13495 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BMG03_13495 PF00561 alpha/beta hydrolase fold BMG03_13510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMG03_13510 PF02824 TGS domain BMG03_13510 PF03129 Anticodon binding domain BMG03_13510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BMG03_13515 PF00313 'Cold-shock' DNA-binding domain BMG03_13520 PF03960 ArsC family BMG03_13525 PF00005 ABC transporter BMG03_13530 PF12704 MacB-like periplasmic core domain BMG03_13530 PF02687 FtsX-like permease family BMG03_13540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BMG03_13540 PF03129 Anticodon binding domain BMG03_13555 PF13089 Polyphosphate kinase N-terminal domain BMG03_13555 PF02503 Polyphosphate kinase middle domain BMG03_13555 PF17941 Polyphosphate kinase C-terminal domain 1 BMG03_13555 PF13090 Polyphosphate kinase C-terminal domain 2 BMG03_13560 PF02541 Ppx/GppA phosphatase family BMG03_13590 PF00289 Biotin carboxylase, N-terminal domain BMG03_13590 PF02785 Biotin carboxylase C-terminal domain BMG03_13590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_13610 PF01039 Carboxyl transferase domain BMG03_13615 PF09856 Predicted transcriptional regulator (DUF2083) BMG03_13615 PF06114 IrrE N-terminal-like domain BMG03_13615 PF01381 Helix-turn-helix BMG03_13635 PF00732 GMC oxidoreductase BMG03_13635 PF05199 GMC oxidoreductase BMG03_13640 PF00171 Aldehyde dehydrogenase family BMG03_13645 PF00440 Bacterial regulatory proteins, tetR family BMG03_13645 PF13977 BetI-type transcriptional repressor, C-terminal BMG03_13650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BMG03_13660 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_13665 PF00005 ABC transporter BMG03_13665 PF00571 CBS domain BMG03_13695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BMG03_13700 PF01709 Transcriptional regulator BMG03_13710 PF02080 TrkA-C domain BMG03_13710 PF03600 Citrate transporter BMG03_13715 PF13277 YmdB-like protein BMG03_13725 PF02469 Fasciclin domain BMG03_13740 PF03852 DNA mismatch endonuclease Vsr BMG03_13745 PF00145 C-5 cytosine-specific DNA methylase BMG03_13845 PF04542 Sigma-70 region 2 BMG03_13845 PF08281 Sigma-70, region 4 BMG03_13875 PF00106 short chain dehydrogenase BMG03_13880 PF02690 Na+/Pi-cotransporter BMG03_13910 PF03466 LysR substrate binding domain BMG03_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_13915 PF00106 short chain dehydrogenase BMG03_13920 PF07995 Glucose / Sorbosone dehydrogenase BMG03_13925 PF01556 DnaJ C terminal domain BMG03_13925 PF00226 DnaJ domain BMG03_13925 PF00684 DnaJ central domain BMG03_13935 PF08406 CbbQ/NirQ/NorQ C-terminal BMG03_13935 PF12556 Cobaltochelatase CobS subunit N terminal BMG03_13935 PF07728 AAA domain (dynein-related subfamily) BMG03_13945 PF03358 NADPH-dependent FMN reductase BMG03_13950 PF06213 Cobalamin biosynthesis protein CobT BMG03_13950 PF11775 Cobalamin biosynthesis protein CobT VWA domain BMG03_13955 PF05195 Aminopeptidase P, N-terminal domain BMG03_13955 PF00557 Metallopeptidase family M24 BMG03_13960 PF00871 Acetokinase family BMG03_13965 PF01515 Phosphate acetyl/butaryl transferase BMG03_13970 PF02913 FAD linked oxidases, C-terminal domain BMG03_13970 PF01565 FAD binding domain BMG03_13980 PF02463 RecF/RecN/SMC N terminal domain BMG03_13985 PF13525 Outer membrane lipoprotein BMG03_13990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BMG03_13995 PF12327 FtsZ family, C-terminal domain BMG03_13995 PF00091 Tubulin/FtsZ family, GTPase domain BMG03_14000 PF02491 SHS2 domain inserted in FTSA BMG03_14005 PF03799 Cell division protein FtsQ BMG03_14010 PF01820 D-ala D-ala ligase N-terminus BMG03_14010 PF07478 D-ala D-ala ligase C-terminus BMG03_14015 PF01565 FAD binding domain BMG03_14015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BMG03_14030 PF01225 Mur ligase family, catalytic domain BMG03_14030 PF02875 Mur ligase family, glutamate ligase domain BMG03_14030 PF08245 Mur ligase middle domain BMG03_14035 PF03033 Glycosyltransferase family 28 N-terminal domain BMG03_14035 PF04101 Glycosyltransferase family 28 C-terminal domain BMG03_14040 PF01098 Cell cycle protein BMG03_14060 PF00440 Bacterial regulatory proteins, tetR family BMG03_14065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_14080 PF02867 Ribonucleotide reductase, barrel domain BMG03_14080 PF00317 Ribonucleotide reductase, all-alpha domain BMG03_14080 PF03477 ATP cone domain BMG03_14095 PF00342 Phosphoglucose isomerase BMG03_14100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BMG03_14105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BMG03_14105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BMG03_14110 PF03459 TOBE domain BMG03_14110 PF10649 Protein of unknown function (DUF2478) BMG03_14110 PF00005 ABC transporter BMG03_14155 PF04376 Arginine-tRNA-protein transferase, N terminus BMG03_14155 PF04377 Arginine-tRNA-protein transferase, C terminus BMG03_14160 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_14165 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_14170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_14180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BMG03_14180 PF00205 Thiamine pyrophosphate enzyme, central domain BMG03_14180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BMG03_14185 PF10369 Small subunit of acetolactate synthase BMG03_14205 PF00535 Glycosyl transferase family 2 BMG03_14235 PF03831 PhnA domain BMG03_14235 PF08274 PhnA Zinc-Ribbon BMG03_14255 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BMG03_14255 PF02867 Ribonucleotide reductase, barrel domain BMG03_14270 PF00313 'Cold-shock' DNA-binding domain BMG03_14275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BMG03_14275 PF01243 Pyridoxamine 5'-phosphate oxidase BMG03_14285 PF01810 LysE type translocator BMG03_14290 PF00156 Phosphoribosyl transferase domain BMG03_14300 PF00155 Aminotransferase class I and II BMG03_14310 PF04715 Anthranilate synthase component I, N terminal region BMG03_14310 PF00425 chorismate binding enzyme BMG03_14320 PF00117 Glutamine amidotransferase class-I BMG03_14325 PF02885 Glycosyl transferase family, helical bundle domain BMG03_14325 PF00591 Glycosyl transferase family, a/b domain BMG03_14330 PF00218 Indole-3-glycerol phosphate synthase BMG03_14335 PF01967 MoaC family BMG03_14340 PF00994 Probable molybdopterin binding domain BMG03_14340 PF03454 MoeA C-terminal region (domain IV) BMG03_14340 PF03453 MoeA N-terminal region (domain I and II) BMG03_14345 PF01726 LexA DNA binding domain BMG03_14345 PF00717 Peptidase S24-like BMG03_14350 PF00753 Metallo-beta-lactamase superfamily BMG03_14350 PF13567 Domain of unknown function (DUF4131) BMG03_14350 PF03772 Competence protein BMG03_14355 PF00749 tRNA synthetases class I (E and Q), catalytic domain BMG03_14360 PF00285 Citrate synthase, C-terminal domain BMG03_14370 PF00106 short chain dehydrogenase BMG03_14375 PF01975 Survival protein SurE BMG03_14395 PF00491 Arginase family BMG03_14400 PF02423 Ornithine cyclodeaminase/mu-crystallin family BMG03_14405 PF01266 FAD dependent oxidoreductase BMG03_14415 PF00902 Sec-independent protein translocase protein (TatC) BMG03_14420 PF02416 mttA/Hcf106 family BMG03_14425 PF02416 mttA/Hcf106 family BMG03_14435 PF01914 MarC family integral membrane protein BMG03_14445 PF13660 Domain of unknown function (DUF4147) BMG03_14445 PF05161 MOFRL family BMG03_14450 PF00034 Cytochrome c BMG03_14455 PF00174 Oxidoreductase molybdopterin binding domain BMG03_14460 PF02872 5'-nucleotidase, C-terminal domain BMG03_14460 PF00149 Calcineurin-like phosphoesterase BMG03_14490 PF02683 Cytochrome C biogenesis protein transmembrane region BMG03_14500 PF01022 Bacterial regulatory protein, arsR family BMG03_14525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BMG03_14525 PF12169 DNA polymerase III subunits gamma and tau domain III BMG03_14525 PF12170 DNA polymerase III tau subunit V interacting with alpha BMG03_14530 PF02575 YbaB/EbfC DNA-binding family BMG03_14535 PF13662 Toprim domain BMG03_14535 PF02132 RecR protein BMG03_14540 PF13417 Glutathione S-transferase, N-terminal domain BMG03_14540 PF00043 Glutathione S-transferase, C-terminal domain BMG03_14545 PF08331 Domain of unknown function (DUF1730) BMG03_14560 PF01063 Amino-transferase class IV BMG03_14565 PF12802 MarR family BMG03_14570 PF00072 Response regulator receiver domain BMG03_14570 PF00486 Transcriptional regulatory protein, C terminal BMG03_14575 PF00355 Rieske [2Fe-2S] domain BMG03_14575 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BMG03_14580 PF00032 Cytochrome b(C-terminal)/b6/petD BMG03_14580 PF00033 Cytochrome b/b6/petB BMG03_14585 PF02167 Cytochrome C1 family BMG03_14590 PF03992 Antibiotic biosynthesis monooxygenase BMG03_14600 PF18665 Tetracyclin repressor-like, C-terminal domain BMG03_14600 PF00440 Bacterial regulatory proteins, tetR family BMG03_14605 PF01264 Chorismate synthase BMG03_14625 PF00107 Zinc-binding dehydrogenase BMG03_14625 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_14630 PF00005 ABC transporter BMG03_14635 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_14640 PF01547 Bacterial extracellular solute-binding protein BMG03_14655 PF00484 Carbonic anhydrase BMG03_14665 PF02789 Cytosol aminopeptidase family, N-terminal domain BMG03_14665 PF00883 Cytosol aminopeptidase family, catalytic domain BMG03_14670 PF00877 NlpC/P60 family BMG03_14675 PF02774 Semialdehyde dehydrogenase, dimerisation domain BMG03_14675 PF01118 Semialdehyde dehydrogenase, NAD binding domain BMG03_14700 PF00011 Hsp20/alpha crystallin family BMG03_14705 PF00089 Trypsin BMG03_14710 PF00089 Trypsin BMG03_14715 PF02754 Cysteine-rich domain BMG03_14715 PF13183 4Fe-4S dicluster domain BMG03_14720 PF01565 FAD binding domain BMG03_14725 PF01565 FAD binding domain BMG03_14725 PF02913 FAD linked oxidases, C-terminal domain BMG03_14735 PF01368 DHH family BMG03_14735 PF17768 RecJ OB domain BMG03_14735 PF02272 DHHA1 domain BMG03_14750 PF00171 Aldehyde dehydrogenase family BMG03_14755 PF01791 DeoC/LacD family aldolase BMG03_14760 PF00294 pfkB family carbohydrate kinase BMG03_14765 PF08220 DeoR-like helix-turn-helix domain BMG03_14765 PF00455 DeoR C terminal sensor domain BMG03_14770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_14770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_14780 PF04143 Sulphur transport BMG03_14790 PF03776 Septum formation topological specificity factor MinE BMG03_14800 PF03775 Septum formation inhibitor MinC, C-terminal domain BMG03_14805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BMG03_14805 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BMG03_14805 PF01276 Orn/Lys/Arg decarboxylase, major domain BMG03_14810 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_14810 PF00107 Zinc-binding dehydrogenase BMG03_14835 PF00768 D-alanyl-D-alanine carboxypeptidase BMG03_14835 PF07943 Penicillin-binding protein 5, C-terminal domain BMG03_14840 PF02223 Thymidylate kinase BMG03_14845 PF09115 DNA polymerase III, delta subunit, C terminal BMG03_14850 PF01026 TatD related DNase BMG03_14865 PF01475 Ferric uptake regulator family BMG03_14870 PF07977 FabA-like domain BMG03_14875 PF00109 Beta-ketoacyl synthase, N-terminal domain BMG03_14875 PF02801 Beta-ketoacyl synthase, C-terminal domain BMG03_14890 PF13419 Haloacid dehalogenase-like hydrolase BMG03_14900 PF00561 alpha/beta hydrolase fold BMG03_14910 PF08207 Elongation factor P (EF-P) KOW-like domain BMG03_14910 PF09285 Elongation factor P, C-terminal BMG03_14910 PF01132 Elongation factor P (EF-P) OB domain BMG03_14915 PF00152 tRNA synthetases class II (D, K and N) BMG03_14970 PF00005 ABC transporter BMG03_14975 PF12399 Branched-chain amino acid ATP-binding cassette transporter BMG03_14975 PF00005 ABC transporter BMG03_14985 PF02653 Branched-chain amino acid transport system / permease component BMG03_14995 PF02492 CobW/HypB/UreG, nucleotide-binding domain BMG03_15000 PF01730 UreF BMG03_15005 PF02814 UreE urease accessory protein, N-terminal domain BMG03_15005 PF05194 UreE urease accessory protein, C-terminal domain BMG03_15015 PF00449 Urease alpha-subunit, N-terminal domain BMG03_15015 PF01979 Amidohydrolase family BMG03_15020 PF00699 Urease beta subunit BMG03_15030 PF00547 Urease, gamma subunit BMG03_15035 PF01774 UreD urease accessory protein BMG03_15040 PF01037 Lrp/AsnC ligand binding domain BMG03_15040 PF13404 AsnC-type helix-turn-helix domain BMG03_15045 PF01037 Lrp/AsnC ligand binding domain BMG03_15050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BMG03_15050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BMG03_15065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BMG03_15065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BMG03_15065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BMG03_15065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BMG03_15070 PF00809 Pterin binding enzyme BMG03_15085 PF02896 PEP-utilising enzyme, TIM barrel domain BMG03_15085 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BMG03_15085 PF00391 PEP-utilising enzyme, mobile domain BMG03_15090 PF05746 DALR anticodon binding domain BMG03_15090 PF02092 Glycyl-tRNA synthetase beta subunit BMG03_15100 PF02091 Glycyl-tRNA synthetase alpha subunit BMG03_15110 PF02386 Cation transport protein BMG03_15115 PF02785 Biotin carboxylase C-terminal domain BMG03_15115 PF02436 Conserved carboxylase domain BMG03_15115 PF00682 HMGL-like BMG03_15115 PF00364 Biotin-requiring enzyme BMG03_15115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_15115 PF00289 Biotin carboxylase, N-terminal domain BMG03_15125 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_15125 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMG03_15125 PF17806 Sarcosine oxidase A3 domain BMG03_15125 PF01571 Aminomethyltransferase folate-binding domain BMG03_15135 PF01266 FAD dependent oxidoreductase BMG03_15145 PF03652 Holliday junction resolvase BMG03_15155 PF00005 ABC transporter BMG03_15155 PF08402 TOBE domain BMG03_15160 PF00106 short chain dehydrogenase BMG03_15170 PF00459 Inositol monophosphatase family BMG03_15175 PF01381 Helix-turn-helix BMG03_15180 PF14765 Polyketide synthase dehydratase BMG03_15180 PF00109 Beta-ketoacyl synthase, N-terminal domain BMG03_15180 PF02801 Beta-ketoacyl synthase, C-terminal domain BMG03_15180 PF16197 Ketoacyl-synthetase C-terminal extension BMG03_15180 PF00698 Acyl transferase domain BMG03_15180 PF08659 KR domain BMG03_15180 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_15180 PF00550 Phosphopantetheine attachment site BMG03_15180 PF00107 Zinc-binding dehydrogenase BMG03_15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_15185 PF03466 LysR substrate binding domain BMG03_15195 PF01027 Inhibitor of apoptosis-promoting Bax1 BMG03_15200 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BMG03_15200 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BMG03_15205 PF01841 Transglutaminase-like superfamily BMG03_15210 PF00005 ABC transporter BMG03_15215 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_15220 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_15225 PF12849 PBP superfamily domain BMG03_15230 PF08450 SMP-30/Gluconolactonase/LRE-like region BMG03_15235 PF02690 Na+/Pi-cotransporter BMG03_15240 PF00455 DeoR C terminal sensor domain BMG03_15240 PF08220 DeoR-like helix-turn-helix domain BMG03_15245 PF13419 Haloacid dehalogenase-like hydrolase BMG03_15250 PF08447 PAS fold BMG03_15250 PF13426 PAS domain BMG03_15250 PF07536 HWE histidine kinase BMG03_15255 PF08946 Osmosensory transporter coiled coil BMG03_15255 PF00083 Sugar (and other) transporter BMG03_15260 PF04945 YHS domain BMG03_15280 PF13683 Integrase core domain BMG03_15280 PF13276 HTH-like domain BMG03_15285 PF01527 Transposase BMG03_15315 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMG03_15315 PF02256 Iron hydrogenase small subunit BMG03_15315 PF02906 Iron only hydrogenase large subunit, C-terminal domain BMG03_15315 PF00037 4Fe-4S binding domain BMG03_15320 PF00529 HlyD membrane-fusion protein of T1SS BMG03_15320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_15325 PF02687 FtsX-like permease family BMG03_15325 PF12704 MacB-like periplasmic core domain BMG03_15325 PF00005 ABC transporter BMG03_15330 PF02687 FtsX-like permease family BMG03_15330 PF00005 ABC transporter BMG03_15330 PF12704 MacB-like periplasmic core domain BMG03_15340 PF02151 UvrB/uvrC motif BMG03_15340 PF12344 Ultra-violet resistance protein B BMG03_15340 PF00271 Helicase conserved C-terminal domain BMG03_15340 PF04851 Type III restriction enzyme, res subunit BMG03_15340 PF17757 UvrB interaction domain BMG03_15370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BMG03_15380 PF03480 Bacterial extracellular solute-binding protein, family 7 BMG03_15390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BMG03_15390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BMG03_15390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BMG03_15405 PF00596 Class II Aldolase and Adducin N-terminal domain BMG03_15410 PF13407 Periplasmic binding protein domain BMG03_15415 PF02653 Branched-chain amino acid transport system / permease component BMG03_15420 PF02653 Branched-chain amino acid transport system / permease component BMG03_15425 PF00005 ABC transporter BMG03_15430 PF04198 Putative sugar-binding domain BMG03_15430 PF00325 Bacterial regulatory proteins, crp family BMG03_15435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BMG03_15435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BMG03_15440 PF03992 Antibiotic biosynthesis monooxygenase BMG03_15450 PF00890 FAD binding domain BMG03_15450 PF14537 Cytochrome c3 BMG03_15455 PF00392 Bacterial regulatory proteins, gntR family BMG03_15455 PF07729 FCD domain BMG03_15465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_15465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMG03_15475 PF04303 PrpF protein BMG03_15480 PF01970 Tripartite tricarboxylate transporter TctA family BMG03_15490 PF00072 Response regulator receiver domain BMG03_15490 PF00486 Transcriptional regulatory protein, C terminal BMG03_15505 PF09278 MerR, DNA binding BMG03_15505 PF00376 MerR family regulatory protein BMG03_15520 PF03328 HpcH/HpaI aldolase/citrate lyase family BMG03_15525 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMG03_15530 PF01557 Fumarylacetoacetate (FAA) hydrolase family BMG03_15540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BMG03_15545 PF00171 Aldehyde dehydrogenase family BMG03_15555 PF01047 MarR family BMG03_15560 PF00202 Aminotransferase class-III BMG03_15570 PF01614 Bacterial transcriptional regulator BMG03_15570 PF09339 IclR helix-turn-helix domain BMG03_15575 PF03401 Tripartite tricarboxylate transporter family receptor BMG03_15585 PF01970 Tripartite tricarboxylate transporter TctA family BMG03_15590 PF00171 Aldehyde dehydrogenase family BMG03_15605 PF01494 FAD binding domain BMG03_15620 PF00294 pfkB family carbohydrate kinase BMG03_15625 PF02910 Fumarate reductase flavoprotein C-term BMG03_15625 PF00890 FAD binding domain BMG03_15630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BMG03_15630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BMG03_15635 PF00356 Bacterial regulatory proteins, lacI family BMG03_15635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BMG03_15645 PF05199 GMC oxidoreductase BMG03_15645 PF00732 GMC oxidoreductase BMG03_15650 PF05199 GMC oxidoreductase BMG03_15650 PF00732 GMC oxidoreductase BMG03_15660 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_15665 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_15670 PF01547 Bacterial extracellular solute-binding protein BMG03_15680 PF00378 Enoyl-CoA hydratase/isomerase BMG03_15685 PF01144 Coenzyme A transferase BMG03_15700 PF00529 HlyD membrane-fusion protein of T1SS BMG03_15700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_15715 PF03601 Conserved hypothetical protein 698 BMG03_15720 PF03466 LysR substrate binding domain BMG03_15720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_15725 PF00072 Response regulator receiver domain BMG03_15730 PF01339 CheB methylesterase BMG03_15730 PF03705 CheR methyltransferase, all-alpha domain BMG03_15730 PF08448 PAS fold BMG03_15730 PF01739 CheR methyltransferase, SAM binding domain BMG03_15735 PF07536 HWE histidine kinase BMG03_15735 PF13581 Histidine kinase-like ATPase domain BMG03_15735 PF13426 PAS domain BMG03_15760 PF01029 NusB family BMG03_15765 PF00885 6,7-dimethyl-8-ribityllumazine synthase BMG03_15770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BMG03_15770 PF00925 GTP cyclohydrolase II BMG03_15775 PF00677 Lumazine binding domain BMG03_15780 PF05159 Capsule polysaccharide biosynthesis protein BMG03_15785 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BMG03_15785 PF10531 SLBB domain BMG03_15785 PF02563 Polysaccharide biosynthesis/export protein BMG03_15790 PF05159 Capsule polysaccharide biosynthesis protein BMG03_15795 PF01872 RibD C-terminal domain BMG03_15795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMG03_15800 PF03477 ATP cone domain BMG03_15805 PF01894 Uncharacterised protein family UPF0047 BMG03_15820 PF04546 Sigma-70, non-essential region BMG03_15820 PF03979 Sigma-70 factor, region 1.1 BMG03_15820 PF00140 Sigma-70 factor, region 1.2 BMG03_15820 PF04542 Sigma-70 region 2 BMG03_15820 PF04539 Sigma-70 region 3 BMG03_15820 PF04545 Sigma-70, region 4 BMG03_15825 PF08275 DNA primase catalytic core, N-terminal domain BMG03_15825 PF01807 CHC2 zinc finger BMG03_15845 PF02540 NAD synthase BMG03_15845 PF00795 Carbon-nitrogen hydrolase BMG03_15855 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BMG03_15870 PF00682 HMGL-like BMG03_15870 PF08502 LeuA allosteric (dimerisation) domain BMG03_15880 PF04085 rod shape-determining protein MreC BMG03_15890 PF00905 Penicillin binding protein transpeptidase domain BMG03_15890 PF03717 Penicillin-binding Protein dimerisation domain BMG03_15895 PF01098 Cell cycle protein BMG03_15900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_15905 PF01634 ATP phosphoribosyltransferase BMG03_15910 PF13393 Histidyl-tRNA synthetase BMG03_15915 PF13393 Histidyl-tRNA synthetase BMG03_15915 PF03129 Anticodon binding domain BMG03_15920 PF04102 SlyX BMG03_15930 PF07733 Bacterial DNA polymerase III alpha NTPase domain BMG03_15930 PF14579 Helix-hairpin-helix motif BMG03_15930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BMG03_15930 PF02811 PHP domain BMG03_15935 PF01799 [2Fe-2S] binding domain BMG03_15935 PF00111 2Fe-2S iron-sulfur cluster binding domain BMG03_15940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BMG03_15940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BMG03_15970 PF02608 ABC transporter substrate-binding protein PnrA-like BMG03_15975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_15980 PF05736 OprF membrane domain BMG03_15980 PF00691 OmpA family BMG03_15990 PF00586 AIR synthase related protein, N-terminal domain BMG03_15990 PF02769 AIR synthase related protein, C-terminal domain BMG03_16000 PF03734 L,D-transpeptidase catalytic domain BMG03_16010 PF00403 Heavy-metal-associated domain BMG03_16025 PF00005 ABC transporter BMG03_16030 PF13472 GDSL-like Lipase/Acylhydrolase family BMG03_16040 PF01218 Coproporphyrinogen III oxidase BMG03_16045 PF01208 Uroporphyrinogen decarboxylase (URO-D) BMG03_16050 PF03900 Porphobilinogen deaminase, C-terminal domain BMG03_16050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BMG03_16070 PF05175 Methyltransferase small domain BMG03_16070 PF08468 Methyltransferase small domain N-terminal BMG03_16075 PF02617 ATP-dependent Clp protease adaptor protein ClpS BMG03_16085 PF00768 D-alanyl-D-alanine carboxypeptidase BMG03_16085 PF07943 Penicillin-binding protein 5, C-terminal domain BMG03_16090 PF03597 Cytochrome oxidase maturation protein cbb3-type BMG03_16105 PF12801 4Fe-4S binding domain BMG03_16105 PF13746 4Fe-4S dicluster domain BMG03_16105 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BMG03_16110 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMG03_16110 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BMG03_16125 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_16140 PF00027 Cyclic nucleotide-binding domain BMG03_16140 PF13545 Crp-like helix-turn-helix domain BMG03_16145 PF04055 Radical SAM superfamily BMG03_16155 PF00440 Bacterial regulatory proteins, tetR family BMG03_16155 PF16925 Tetracyclin repressor-like, C-terminal domain BMG03_16160 PF00107 Zinc-binding dehydrogenase BMG03_16160 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_16175 PF01507 Phosphoadenosine phosphosulfate reductase family BMG03_16180 PF00009 Elongation factor Tu GTP binding domain BMG03_16185 PF01321 Creatinase/Prolidase N-terminal domain BMG03_16185 PF00557 Metallopeptidase family M24 BMG03_16190 PF07687 Peptidase dimerisation domain BMG03_16190 PF01546 Peptidase family M20/M25/M40 BMG03_16195 PF00005 ABC transporter BMG03_16195 PF17912 MalK OB fold domain BMG03_16200 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_16205 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_16210 PF13416 Bacterial extracellular solute-binding protein BMG03_16230 PF00392 Bacterial regulatory proteins, gntR family BMG03_16230 PF00155 Aminotransferase class I and II BMG03_16240 PF00291 Pyridoxal-phosphate dependent enzyme BMG03_16255 PF10011 Predicted membrane protein (DUF2254) BMG03_16270 PF02594 Uncharacterised ACR, YggU family COG1872 BMG03_16300 PF00486 Transcriptional regulatory protein, C terminal BMG03_16300 PF00072 Response regulator receiver domain BMG03_16310 PF00152 tRNA synthetases class II (D, K and N) BMG03_16310 PF01336 OB-fold nucleic acid binding domain BMG03_16310 PF02938 GAD domain BMG03_16320 PF02142 MGS-like domain BMG03_16320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BMG03_16320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BMG03_16330 PF01183 Glycosyl hydrolases family 25 BMG03_16340 PF02627 Carboxymuconolactone decarboxylase family BMG03_16345 PF08669 Glycine cleavage T-protein C-terminal barrel domain BMG03_16345 PF01571 Aminomethyltransferase folate-binding domain BMG03_16360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMG03_16360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_16370 PF01545 Cation efflux family BMG03_16370 PF16916 Dimerisation domain of Zinc Transporter BMG03_16375 PF01432 Peptidase family M3 BMG03_16380 PF00899 ThiF family BMG03_16385 PF00692 dUTPase BMG03_16390 PF04127 DNA / pantothenate metabolism flavoprotein BMG03_16390 PF02441 Flavoprotein BMG03_16400 PF04542 Sigma-70 region 2 BMG03_16400 PF04545 Sigma-70, region 4 BMG03_16400 PF00140 Sigma-70 factor, region 1.2 BMG03_16405 PF01078 Magnesium chelatase, subunit ChlI BMG03_16405 PF13335 Magnesium chelatase, subunit ChlI C-terminal BMG03_16410 PF07859 alpha/beta hydrolase fold BMG03_16415 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BMG03_16415 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BMG03_16420 PF02021 Uncharacterised protein family UPF0102 BMG03_16425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BMG03_16435 PF08335 GlnD PII-uridylyltransferase BMG03_16435 PF01966 HD domain BMG03_16440 PF03023 Lipid II flippase MurJ BMG03_16450 PF00579 tRNA synthetases class I (W and Y) BMG03_16455 PF02540 NAD synthase BMG03_16455 PF00117 Glutamine amidotransferase class-I BMG03_16455 PF00958 GMP synthase C terminal domain BMG03_16460 PF00120 Glutamine synthetase, catalytic domain BMG03_16465 PF01266 FAD dependent oxidoreductase BMG03_16470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BMG03_16475 PF13380 CoA binding domain BMG03_16480 PF00588 SpoU rRNA Methylase family BMG03_16480 PF08032 RNA 2'-O ribose methyltransferase substrate binding BMG03_16500 PF01053 Cys/Met metabolism PLP-dependent enzyme BMG03_16510 PF02254 TrkA-N domain BMG03_16510 PF00999 Sodium/hydrogen exchanger family BMG03_16515 PF02559 CarD-like/TRCF domain BMG03_16520 PF11953 Domain of unknown function (DUF3470) BMG03_16520 PF00037 4Fe-4S binding domain BMG03_16525 PF01479 S4 domain BMG03_16560 PF14403 Circularly permuted ATP-grasp type 2 BMG03_16560 PF04168 A predicted alpha-helical domain with a conserved ER motif. BMG03_16565 PF14403 Circularly permuted ATP-grasp type 2 BMG03_16590 PF01790 Prolipoprotein diacylglyceryl transferase BMG03_16600 PF02562 PhoH-like protein BMG03_16610 PF01938 TRAM domain BMG03_16610 PF00919 Uncharacterized protein family UPF0004 BMG03_16610 PF04055 Radical SAM superfamily BMG03_16630 PF02586 SOS response associated peptidase (SRAP) BMG03_16640 PF01180 Dihydroorotate dehydrogenase BMG03_16645 PF03960 ArsC family BMG03_16650 PF00929 Exonuclease BMG03_16655 PF00072 Response regulator receiver domain BMG03_16655 PF00486 Transcriptional regulatory protein, C terminal BMG03_16670 PF00474 Sodium:solute symporter family BMG03_16680 PF05191 Adenylate kinase, active site lid BMG03_16685 PF00501 AMP-binding enzyme BMG03_16685 PF16177 Acetyl-coenzyme A synthetase N-terminus BMG03_16685 PF13193 AMP-binding enzyme C-terminal domain BMG03_16705 PF01921 tRNA synthetases class I (K) BMG03_16715 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BMG03_16720 PF01467 Cytidylyltransferase-like BMG03_16725 PF17151 Periplasmic sensor domain BMG03_16725 PF00990 Diguanylate cyclase, GGDEF domain BMG03_16740 PF13419 Haloacid dehalogenase-like hydrolase BMG03_16750 PF00990 Diguanylate cyclase, GGDEF domain BMG03_16750 PF00072 Response regulator receiver domain BMG03_16765 PF04542 Sigma-70 region 2 BMG03_16765 PF08281 Sigma-70, region 4 BMG03_16800 PF00248 Aldo/keto reductase family BMG03_16805 PF01641 SelR domain BMG03_16810 PF18158 Adaptive response protein AidB N-terminal domain BMG03_16810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_16810 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_16820 PF01926 50S ribosome-binding GTPase BMG03_16820 PF06071 Protein of unknown function (DUF933) BMG03_16830 PF00290 Tryptophan synthase alpha chain BMG03_16835 PF01061 ABC-2 type transporter BMG03_16845 PF00919 Uncharacterized protein family UPF0004 BMG03_16845 PF18693 TRAM domain BMG03_16845 PF04055 Radical SAM superfamily BMG03_16855 PF07885 Ion channel BMG03_16870 PF00005 ABC transporter BMG03_16870 PF12848 ABC transporter BMG03_16875 PF13614 AAA domain BMG03_16885 PF00501 AMP-binding enzyme BMG03_16885 PF13193 AMP-binding enzyme C-terminal domain BMG03_16890 PF00664 ABC transporter transmembrane region BMG03_16890 PF00005 ABC transporter BMG03_16900 PF00378 Enoyl-CoA hydratase/isomerase BMG03_16905 PF00108 Thiolase, N-terminal domain BMG03_16905 PF02803 Thiolase, C-terminal domain BMG03_16910 PF07687 Peptidase dimerisation domain BMG03_16910 PF01546 Peptidase family M20/M25/M40 BMG03_16915 PF01144 Coenzyme A transferase BMG03_16920 PF01144 Coenzyme A transferase BMG03_16925 PF00202 Aminotransferase class-III BMG03_16930 PF00005 ABC transporter BMG03_16945 PF02633 Creatinine amidohydrolase BMG03_16950 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_16955 PF03466 LysR substrate binding domain BMG03_16965 PF00202 Aminotransferase class-III BMG03_16970 PF00171 Aldehyde dehydrogenase family BMG03_16975 PF03918 Cytochrome C biogenesis protein BMG03_16980 PF01578 Cytochrome C assembly protein BMG03_16980 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BMG03_17000 PF05199 GMC oxidoreductase BMG03_17000 PF00732 GMC oxidoreductase BMG03_17005 PF03483 B3/4 domain BMG03_17005 PF03484 tRNA synthetase B5 domain BMG03_17005 PF03147 Ferredoxin-fold anticodon binding domain BMG03_17005 PF01588 Putative tRNA binding domain BMG03_17005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BMG03_17025 PF01409 tRNA synthetases class II core domain (F) BMG03_17025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BMG03_17075 PF00453 Ribosomal protein L20 BMG03_17080 PF01632 Ribosomal protein L35 BMG03_17090 PF00224 Pyruvate kinase, barrel domain BMG03_17090 PF02887 Pyruvate kinase, alpha/beta domain BMG03_17115 PF01063 Amino-transferase class IV BMG03_17120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BMG03_17120 PF13378 Enolase C-terminal domain-like BMG03_17130 PF03328 HpcH/HpaI aldolase/citrate lyase family BMG03_17140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BMG03_17150 PF01022 Bacterial regulatory protein, arsR family BMG03_17165 PF00005 ABC transporter BMG03_17180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BMG03_17180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BMG03_17185 PF00206 Lyase BMG03_17185 PF14698 Argininosuccinate lyase C-terminal BMG03_17190 PF08534 Redoxin BMG03_17200 PF00563 EAL domain BMG03_17200 PF00196 Bacterial regulatory proteins, luxR family BMG03_17205 PF02803 Thiolase, C-terminal domain BMG03_17205 PF00108 Thiolase, N-terminal domain BMG03_17235 PF00348 Polyprenyl synthetase BMG03_17240 PF08544 GHMP kinases C terminal BMG03_17255 PF01272 Transcription elongation factor, GreA/GreB, C-term BMG03_17255 PF03449 Transcription elongation factor, N-terminal BMG03_17270 PF12804 MobA-like NTP transferase domain BMG03_17285 PF00471 Ribosomal protein L33 BMG03_17325 PF01676 Metalloenzyme superfamily BMG03_17330 PF00591 Glycosyl transferase family, a/b domain BMG03_17330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BMG03_17330 PF02885 Glycosyl transferase family, helical bundle domain BMG03_17335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BMG03_17340 PF03949 Malic enzyme, NAD binding domain BMG03_17340 PF01515 Phosphate acetyl/butaryl transferase BMG03_17340 PF00390 Malic enzyme, N-terminal domain BMG03_17345 PF13193 AMP-binding enzyme C-terminal domain BMG03_17345 PF16177 Acetyl-coenzyme A synthetase N-terminus BMG03_17345 PF00501 AMP-binding enzyme BMG03_17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_17350 PF00072 Response regulator receiver domain BMG03_17355 PF02954 Bacterial regulatory protein, Fis family BMG03_17355 PF00158 Sigma-54 interaction domain BMG03_17355 PF00072 Response regulator receiver domain BMG03_17360 PF01513 ATP-NAD kinase BMG03_17365 PF00464 Serine hydroxymethyltransferase BMG03_17380 PF01292 Prokaryotic cytochrome b561 BMG03_17395 PF16242 Pyridoxamine 5'-phosphate oxidase like BMG03_17400 PF06421 GTP-binding protein LepA C-terminus BMG03_17400 PF00009 Elongation factor Tu GTP binding domain BMG03_17400 PF00679 Elongation factor G C-terminus BMG03_17415 PF01451 Low molecular weight phosphotyrosine protein phosphatase BMG03_17420 PF02146 Sir2 family BMG03_17425 PF04107 Glutamate-cysteine ligase family 2(GCS2) BMG03_17435 PF04452 RNA methyltransferase BMG03_17440 PF01040 UbiA prenyltransferase family BMG03_17445 PF13488 Glycine zipper BMG03_17445 PF00691 OmpA family BMG03_17460 PF02634 FdhD/NarQ family BMG03_17465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BMG03_17465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BMG03_17465 PF01568 Molydopterin dinucleotide binding domain BMG03_17465 PF00384 Molybdopterin oxidoreductase BMG03_17465 PF12838 4Fe-4S dicluster domain BMG03_17470 PF00037 4Fe-4S binding domain BMG03_17470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BMG03_17470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BMG03_17480 PF01343 Peptidase family S49 BMG03_17480 PF06965 Na+/H+ antiporter 1 BMG03_17490 PF01699 Sodium/calcium exchanger protein BMG03_17500 PF02151 UvrB/uvrC motif BMG03_17500 PF12826 Helix-hairpin-helix motif BMG03_17500 PF08459 UvrC Helix-hairpin-helix N-terminal BMG03_17500 PF01541 GIY-YIG catalytic domain BMG03_17505 PF12544 Lysine-2,3-aminomutase BMG03_17505 PF04055 Radical SAM superfamily BMG03_17510 PF01066 CDP-alcohol phosphatidyltransferase BMG03_17520 PF02391 MoaE protein BMG03_17535 PF01230 HIT domain BMG03_17540 PF00294 pfkB family carbohydrate kinase BMG03_17545 PF10576 Iron-sulfur binding domain of endonuclease III BMG03_17545 PF00730 HhH-GPD superfamily base excision DNA repair protein BMG03_17545 PF00633 Helix-hairpin-helix motif BMG03_17550 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BMG03_17550 PF02805 Metal binding domain of Ada BMG03_17550 PF12833 Helix-turn-helix domain BMG03_17550 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BMG03_17555 PF13488 Glycine zipper BMG03_17555 PF00691 OmpA family BMG03_17560 PF00392 Bacterial regulatory proteins, gntR family BMG03_17560 PF07729 FCD domain BMG03_17565 PF00430 ATP synthase B/B' CF(0) BMG03_17575 PF00137 ATP synthase subunit C BMG03_17580 PF00119 ATP synthase A chain BMG03_17585 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter BMG03_17610 PF00445 Ribonuclease T2 family BMG03_17620 PF00107 Zinc-binding dehydrogenase BMG03_17620 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_17630 PF01165 Ribosomal protein S21 BMG03_17635 PF02386 Cation transport protein BMG03_17640 PF01037 Lrp/AsnC ligand binding domain BMG03_17645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BMG03_17645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BMG03_17650 PF01741 Large-conductance mechanosensitive channel, MscL BMG03_17660 PF00459 Inositol monophosphatase family BMG03_17665 PF03466 LysR substrate binding domain BMG03_17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_17670 PF02219 Methylenetetrahydrofolate reductase BMG03_17690 PF10458 Valyl tRNA synthetase tRNA binding arm BMG03_17690 PF00133 tRNA synthetases class I (I, L, M and V) BMG03_17690 PF08264 Anticodon-binding domain of tRNA BMG03_17700 PF00155 Aminotransferase class I and II BMG03_17715 PF00266 Aminotransferase class-V BMG03_17730 PF01571 Aminomethyltransferase folate-binding domain BMG03_17765 PF00294 pfkB family carbohydrate kinase BMG03_17775 PF00005 ABC transporter BMG03_17780 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_17785 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_17790 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_17795 PF00356 Bacterial regulatory proteins, lacI family BMG03_17805 PF17763 Glutaminase/Asparaginase C-terminal domain BMG03_17805 PF00710 Asparaginase, N-terminal BMG03_17810 PF02632 BioY family BMG03_17815 PF02361 Cobalt transport protein BMG03_17820 PF00005 ABC transporter BMG03_17825 PF02028 BCCT, betaine/carnitine/choline family transporter BMG03_17835 PF00327 Ribosomal protein L30p/L7e BMG03_17840 PF00333 Ribosomal protein S5, N-terminal domain BMG03_17840 PF03719 Ribosomal protein S5, C-terminal domain BMG03_17845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BMG03_17850 PF00347 Ribosomal protein L6 BMG03_17855 PF00410 Ribosomal protein S8 BMG03_17860 PF00253 Ribosomal protein S14p/S29e BMG03_17865 PF00673 ribosomal L5P family C-terminus BMG03_17865 PF00281 Ribosomal protein L5 BMG03_17870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BMG03_17870 PF00467 KOW motif BMG03_17875 PF00238 Ribosomal protein L14p/L23e BMG03_17880 PF00366 Ribosomal protein S17 BMG03_17885 PF00831 Ribosomal L29 protein BMG03_17895 PF04052 TolB amino-terminal domain BMG03_17895 PF07676 WD40-like Beta Propeller Repeat BMG03_17900 PF00252 Ribosomal protein L16p/L10e BMG03_17905 PF00189 Ribosomal protein S3, C-terminal domain BMG03_17905 PF07650 KH domain BMG03_17910 PF00237 Ribosomal protein L22p/L17e BMG03_17915 PF00203 Ribosomal protein S19 BMG03_17920 PF00181 Ribosomal Proteins L2, RNA binding domain BMG03_17920 PF03947 Ribosomal Proteins L2, C-terminal domain BMG03_17930 PF00276 Ribosomal protein L23 BMG03_17935 PF00573 Ribosomal protein L4/L1 family BMG03_17940 PF00297 Ribosomal protein L3 BMG03_17945 PF00338 Ribosomal protein S10p/S20e BMG03_17950 PF03144 Elongation factor Tu domain 2 BMG03_17950 PF03143 Elongation factor Tu C-terminal domain BMG03_17950 PF00009 Elongation factor Tu GTP binding domain BMG03_17955 PF14492 Elongation Factor G, domain II BMG03_17955 PF03764 Elongation factor G, domain IV BMG03_17955 PF00679 Elongation factor G C-terminus BMG03_17955 PF00009 Elongation factor Tu GTP binding domain BMG03_17955 PF03144 Elongation factor Tu domain 2 BMG03_17960 PF00177 Ribosomal protein S7p/S5e BMG03_17965 PF00164 Ribosomal protein S12/S23 BMG03_17970 PF01569 PAP2 superfamily BMG03_17975 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BMG03_17985 PF00535 Glycosyl transferase family 2 BMG03_17995 PF05000 RNA polymerase Rpb1, domain 4 BMG03_17995 PF04998 RNA polymerase Rpb1, domain 5 BMG03_17995 PF04997 RNA polymerase Rpb1, domain 1 BMG03_17995 PF00623 RNA polymerase Rpb1, domain 2 BMG03_17995 PF04983 RNA polymerase Rpb1, domain 3 BMG03_18000 PF04565 RNA polymerase Rpb2, domain 3 BMG03_18000 PF04563 RNA polymerase beta subunit BMG03_18000 PF04561 RNA polymerase Rpb2, domain 2 BMG03_18000 PF00562 RNA polymerase Rpb2, domain 6 BMG03_18000 PF04560 RNA polymerase Rpb2, domain 7 BMG03_18000 PF10385 RNA polymerase beta subunit external 1 domain BMG03_18005 PF16320 Ribosomal protein L7/L12 dimerisation domain BMG03_18005 PF00542 Ribosomal protein L7/L12 C-terminal domain BMG03_18010 PF00466 Ribosomal protein L10 BMG03_18015 PF00687 Ribosomal protein L1p/L10e family BMG03_18020 PF03946 Ribosomal protein L11, N-terminal domain BMG03_18020 PF00298 Ribosomal protein L11, RNA binding domain BMG03_18025 PF02357 Transcription termination factor nusG BMG03_18025 PF00467 KOW motif BMG03_18050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BMG03_18050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BMG03_18050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BMG03_18050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BMG03_18065 PF00005 ABC transporter BMG03_18075 PF01061 ABC-2 type transporter BMG03_18090 PF01965 DJ-1/PfpI family BMG03_18095 PF01544 CorA-like Mg2+ transporter protein BMG03_18100 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_18110 PF03143 Elongation factor Tu C-terminal domain BMG03_18110 PF03144 Elongation factor Tu domain 2 BMG03_18110 PF00009 Elongation factor Tu GTP binding domain BMG03_18115 PF00067 Cytochrome P450 BMG03_18120 PF03989 DNA gyrase C-terminal domain, beta-propeller BMG03_18120 PF00521 DNA gyrase/topoisomerase IV, subunit A BMG03_18130 PF00106 short chain dehydrogenase BMG03_18140 PF01923 Cobalamin adenosyltransferase BMG03_18145 PF18074 Primosomal protein N C-terminal domain BMG03_18145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BMG03_18145 PF00270 DEAD/DEAH box helicase BMG03_18145 PF17764 3′ DNA-binding domain (3′BD) BMG03_18150 PF00923 Transaldolase/Fructose-6-phosphate aldolase BMG03_18160 PF00589 Phage integrase family BMG03_18160 PF02899 Phage integrase, N-terminal SAM-like domain BMG03_18165 PF01066 CDP-alcohol phosphatidyltransferase BMG03_18180 PF01416 tRNA pseudouridine synthase BMG03_18185 PF02719 Polysaccharide biosynthesis protein BMG03_18190 PF02397 Bacterial sugar transferase BMG03_18195 PF01063 Amino-transferase class IV BMG03_18210 PF01106 NifU-like domain BMG03_18215 PF00814 Glycoprotease family BMG03_18245 PF01048 Phosphorylase superfamily BMG03_18250 PF01925 Sulfite exporter TauE/SafE BMG03_18285 PF00005 ABC transporter BMG03_18290 PF02653 Branched-chain amino acid transport system / permease component BMG03_18295 PF13407 Periplasmic binding protein domain BMG03_18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_18305 PF00672 HAMP domain BMG03_18305 PF00512 His Kinase A (phospho-acceptor) domain BMG03_18310 PF00486 Transcriptional regulatory protein, C terminal BMG03_18310 PF00072 Response regulator receiver domain BMG03_18315 PF13180 PDZ domain BMG03_18330 PF00664 ABC transporter transmembrane region BMG03_18330 PF00005 ABC transporter BMG03_18335 PF00005 ABC transporter BMG03_18335 PF00664 ABC transporter transmembrane region BMG03_18340 PF01654 Cytochrome bd terminal oxidase subunit I BMG03_18345 PF02322 Cytochrome bd terminal oxidase subunit II BMG03_18350 PF08173 Membrane bound YbgT-like protein BMG03_18355 PF01012 Electron transfer flavoprotein domain BMG03_18360 PF00766 Electron transfer flavoprotein FAD-binding domain BMG03_18360 PF01012 Electron transfer flavoprotein domain BMG03_18370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BMG03_18370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BMG03_18380 PF00381 PTS HPr component phosphorylation site BMG03_18390 PF03668 P-loop ATPase protein family BMG03_18395 PF02603 HPr Serine kinase N terminus BMG03_18395 PF07475 HPr Serine kinase C-terminal domain BMG03_18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_18400 PF00672 HAMP domain BMG03_18400 PF13755 Sensor N-terminal transmembrane domain BMG03_18400 PF13756 Stimulus-sensing domain BMG03_18400 PF00512 His Kinase A (phospho-acceptor) domain BMG03_18405 PF00072 Response regulator receiver domain BMG03_18405 PF00486 Transcriptional regulatory protein, C terminal BMG03_18410 PF01293 Phosphoenolpyruvate carboxykinase BMG03_18415 PF13091 PLD-like domain BMG03_18420 PF00773 RNB domain BMG03_18420 PF08461 Ribonuclease R winged-helix domain BMG03_18420 PF17876 Cold shock domain BMG03_18420 PF00575 S1 RNA binding domain BMG03_18420 PF08206 Ribonuclease B OB domain BMG03_18425 PF13673 Acetyltransferase (GNAT) domain BMG03_18430 PF07687 Peptidase dimerisation domain BMG03_18430 PF01546 Peptidase family M20/M25/M40 BMG03_18455 PF00583 Acetyltransferase (GNAT) family BMG03_18460 PF02565 Recombination protein O C terminal BMG03_18460 PF11967 Recombination protein O N terminal BMG03_18475 PF01926 50S ribosome-binding GTPase BMG03_18475 PF07650 KH domain BMG03_18480 PF00035 Double-stranded RNA binding motif BMG03_18480 PF14622 Ribonuclease-III-like BMG03_18485 PF10502 Signal peptidase, peptidase S26 BMG03_18490 PF01648 4'-phosphopantetheinyl transferase superfamily BMG03_18495 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BMG03_18500 PF00849 RNA pseudouridylate synthase BMG03_18515 PF00108 Thiolase, N-terminal domain BMG03_18515 PF02803 Thiolase, C-terminal domain BMG03_18520 PF01740 STAS domain BMG03_18545 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BMG03_18545 PF17854 FtsK alpha domain BMG03_18545 PF09397 Ftsk gamma domain BMG03_18545 PF01580 FtsK/SpoIIIE family BMG03_18550 PF00155 Aminotransferase class I and II BMG03_18555 PF01425 Amidase BMG03_18560 PF01494 FAD binding domain BMG03_18565 PF03966 Trm112p-like protein BMG03_18575 PF00085 Thioredoxin BMG03_18580 PF03372 Endonuclease/Exonuclease/phosphatase family BMG03_18585 PF00171 Aldehyde dehydrogenase family BMG03_18590 PF10417 C-terminal domain of 1-Cys peroxiredoxin BMG03_18590 PF00578 AhpC/TSA family BMG03_18595 PF00013 KH domain BMG03_18595 PF03725 3' exoribonuclease family, domain 2 BMG03_18595 PF01138 3' exoribonuclease family, domain 1 BMG03_18595 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BMG03_18595 PF00575 S1 RNA binding domain BMG03_18605 PF00999 Sodium/hydrogen exchanger family BMG03_18610 PF00474 Sodium:solute symporter family BMG03_18615 PF00312 Ribosomal protein S15 BMG03_18630 PF16198 tRNA pseudouridylate synthase B C-terminal domain BMG03_18630 PF01509 TruB family pseudouridylate synthase (N terminal domain) BMG03_18640 PF02033 Ribosome-binding factor A BMG03_18645 PF01113 Dihydrodipicolinate reductase, N-terminus BMG03_18645 PF05173 Dihydrodipicolinate reductase, C-terminus BMG03_18655 PF01189 16S rRNA methyltransferase RsmB/F BMG03_18655 PF01029 NusB family BMG03_18665 PF02142 MGS-like domain BMG03_18665 PF01808 AICARFT/IMPCHase bienzyme BMG03_18670 PF01252 Signal peptidase (SPase) II BMG03_18680 PF00675 Insulinase (Peptidase family M16) BMG03_18680 PF05193 Peptidase M16 inactive domain BMG03_18685 PF05193 Peptidase M16 inactive domain BMG03_18690 PF08676 MutL C terminal dimerisation domain BMG03_18690 PF01119 DNA mismatch repair protein, C-terminal domain BMG03_18695 PF02646 RmuC family BMG03_18705 PF00486 Transcriptional regulatory protein, C terminal BMG03_18705 PF00072 Response regulator receiver domain BMG03_18710 PF00925 GTP cyclohydrolase II BMG03_18720 PF01168 Alanine racemase, N-terminal domain BMG03_18725 PF13609 Gram-negative porin BMG03_18730 PF12100 Domain of unknown function (DUF3576) BMG03_18735 PF08264 Anticodon-binding domain of tRNA BMG03_18735 PF00133 tRNA synthetases class I (I, L, M and V) BMG03_18735 PF13603 Leucyl-tRNA synthetase, Domain 2 BMG03_18735 PF09334 tRNA synthetases class I (M) BMG03_18755 PF00043 Glutathione S-transferase, C-terminal domain BMG03_18755 PF02798 Glutathione S-transferase, N-terminal domain BMG03_18760 PF07690 Major Facilitator Superfamily BMG03_18770 PF13382 Adenine deaminase C-terminal domain BMG03_18770 PF01979 Amidohydrolase family BMG03_18775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BMG03_18775 PF01048 Phosphorylase superfamily BMG03_18780 PF00216 Bacterial DNA-binding protein BMG03_18790 PF13406 Transglycosylase SLT domain BMG03_18800 PF00132 Bacterial transferase hexapeptide (six repeats) BMG03_18800 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BMG03_18800 PF14602 Hexapeptide repeat of succinyl-transferase BMG03_18805 PF03641 Possible lysine decarboxylase BMG03_18805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BMG03_18805 PF11892 Domain of unknown function (DUF3412) BMG03_18810 PF07722 Peptidase C26 BMG03_18820 PF04055 Radical SAM superfamily BMG03_18840 PF07378 Flagellar protein FlbT BMG03_18850 PF00700 Bacterial flagellin C-terminal helical region BMG03_18850 PF00669 Bacterial flagellin N-terminal helical region BMG03_18870 PF13860 FlgD Ig-like domain BMG03_18870 PF03963 Flagellar hook capping protein - N-terminal region BMG03_18870 PF13861 FlgD Tudor-like domain BMG03_18875 PF03109 ABC1 family BMG03_18880 PF01209 ubiE/COQ5 methyltransferase family BMG03_18885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BMG03_18885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BMG03_18885 PF06827 Zinc finger found in FPG and IleRS BMG03_18890 PF00378 Enoyl-CoA hydratase/isomerase BMG03_18895 PF01649 Ribosomal protein S20 BMG03_18910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BMG03_18910 PF02770 Acyl-CoA dehydrogenase, middle domain BMG03_18910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BMG03_18915 PF02515 CoA-transferase family III BMG03_18925 PF00221 Aromatic amino acid lyase BMG03_18930 PF01979 Amidohydrolase family BMG03_18950 PF13610 DDE domain BMG03_18970 PF00196 Bacterial regulatory proteins, luxR family BMG03_18970 PF00072 Response regulator receiver domain BMG03_18995 PF02082 Transcriptional regulator BMG03_19020 PF00510 Cytochrome c oxidase subunit III BMG03_19025 PF04055 Radical SAM superfamily BMG03_19030 PF00005 ABC transporter BMG03_19030 PF03459 TOBE domain BMG03_19030 PF10649 Protein of unknown function (DUF2478) BMG03_19035 PF00484 Carbonic anhydrase BMG03_19040 PF00639 PPIC-type PPIASE domain BMG03_19040 PF09312 SurA N-terminal domain BMG03_19045 PF02665 Nitrate reductase gamma subunit BMG03_19050 PF02613 Nitrate reductase delta subunit BMG03_19055 PF14711 Respiratory nitrate reductase beta C-terminal BMG03_19055 PF13247 4Fe-4S dicluster domain BMG03_19060 PF14710 Respiratory nitrate reductase alpha N-terminal BMG03_19060 PF01568 Molydopterin dinucleotide binding domain BMG03_19060 PF00384 Molybdopterin oxidoreductase BMG03_19065 PF07690 Major Facilitator Superfamily BMG03_19070 PF07690 Major Facilitator Superfamily BMG03_19075 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BMG03_19085 PF00106 short chain dehydrogenase BMG03_19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_19120 PF03466 LysR substrate binding domain BMG03_19125 PF04079 Segregation and condensation complex subunit ScpB BMG03_19145 PF13614 AAA domain BMG03_19150 PF02195 ParB-like nuclease domain BMG03_19150 PF07506 RepB plasmid partitioning protein BMG03_19155 PF11800 Replication protein C C-terminal region BMG03_19155 PF03428 Replication protein C N-terminal domain BMG03_19170 PF00589 Phage integrase family BMG03_19180 PF04079 Segregation and condensation complex subunit ScpB BMG03_19245 PF00872 Transposase, Mutator family BMG03_19250 PF13411 MerR HTH family regulatory protein BMG03_19255 PF02411 MerT mercuric transport protein BMG03_19270 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_19270 PF00403 Heavy-metal-associated domain BMG03_19270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_19275 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BMG03_19280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BMG03_19280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BMG03_19285 PF01569 PAP2 superfamily BMG03_19290 PF01569 PAP2 superfamily BMG03_19300 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BMG03_19305 PF03050 Transposase IS66 family BMG03_19305 PF13005 zinc-finger binding domain of transposase IS66 BMG03_19305 PF13817 IS66 C-terminal element BMG03_19305 PF13007 Transposase C of IS166 homeodomain BMG03_19320 PF03050 Transposase IS66 family BMG03_19320 PF13817 IS66 C-terminal element BMG03_19320 PF13007 Transposase C of IS166 homeodomain BMG03_19320 PF13005 zinc-finger binding domain of transposase IS66 BMG03_19335 PF01527 Transposase BMG03_19340 PF01544 CorA-like Mg2+ transporter protein BMG03_19360 PF09335 SNARE associated Golgi protein BMG03_19375 PF00665 Integrase core domain BMG03_19375 PF13276 HTH-like domain BMG03_19375 PF13333 Integrase core domain BMG03_19380 PF00872 Transposase, Mutator family BMG03_19400 PF06314 Acetoacetate decarboxylase (ADC) BMG03_19425 PF13091 PLD-like domain BMG03_19430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BMG03_19435 PF00510 Cytochrome c oxidase subunit III BMG03_19440 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_19445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BMG03_19445 PF06481 COX Aromatic Rich Motif BMG03_19450 PF13737 Transposase DDE domain BMG03_19460 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_19465 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_19475 PF00149 Calcineurin-like phosphoesterase BMG03_19495 PF13276 HTH-like domain BMG03_19495 PF13683 Integrase core domain BMG03_19500 PF01527 Transposase BMG03_19505 PF13683 Integrase core domain BMG03_19505 PF13276 HTH-like domain BMG03_19525 PF00872 Transposase, Mutator family BMG03_19530 PF13340 Putative transposase of IS4/5 family (DUF4096) BMG03_19545 PF13276 HTH-like domain BMG03_19545 PF13683 Integrase core domain BMG03_19560 PF01527 Transposase BMG03_19580 PF09335 SNARE associated Golgi protein BMG03_19585 PF00512 His Kinase A (phospho-acceptor) domain BMG03_19585 PF07689 KaiB domain BMG03_19585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_19595 PF00072 Response regulator receiver domain BMG03_19595 PF00486 Transcriptional regulatory protein, C terminal BMG03_19600 PF03706 Lysylphosphatidylglycerol synthase TM region BMG03_19600 PF09924 Uncharacterised conserved protein (DUF2156) BMG03_19605 PF01569 PAP2 superfamily BMG03_19620 PF00005 ABC transporter BMG03_19680 PF07729 FCD domain BMG03_19680 PF00392 Bacterial regulatory proteins, gntR family BMG03_19695 PF01970 Tripartite tricarboxylate transporter TctA family BMG03_19710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BMG03_19710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BMG03_19735 PF07729 FCD domain BMG03_19735 PF00392 Bacterial regulatory proteins, gntR family BMG03_19740 PF01925 Sulfite exporter TauE/SafE BMG03_19745 PF00355 Rieske [2Fe-2S] domain BMG03_19745 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BMG03_19750 PF07687 Peptidase dimerisation domain BMG03_19750 PF01546 Peptidase family M20/M25/M40 BMG03_19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_19755 PF03466 LysR substrate binding domain BMG03_19765 PF01042 Endoribonuclease L-PSP BMG03_19775 PF02082 Transcriptional regulator BMG03_19785 PF04055 Radical SAM superfamily BMG03_19790 PF00510 Cytochrome c oxidase subunit III BMG03_19805 PF01814 Hemerythrin HHE cation binding domain BMG03_19805 PF04405 Domain of Unknown function (DUF542) BMG03_19810 PF02627 Carboxymuconolactone decarboxylase family BMG03_19815 PF04343 Protein of unknown function, DUF488 BMG03_19820 PF03060 Nitronate monooxygenase BMG03_19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BMG03_19825 PF03466 LysR substrate binding domain BMG03_19830 PF13737 Transposase DDE domain BMG03_19835 PF01527 Transposase BMG03_19860 PF03401 Tripartite tricarboxylate transporter family receptor BMG03_19865 PF07729 FCD domain BMG03_19865 PF00392 Bacterial regulatory proteins, gntR family BMG03_19875 PF00107 Zinc-binding dehydrogenase BMG03_19875 PF08240 Alcohol dehydrogenase GroES-like domain BMG03_19880 PF13610 DDE domain BMG03_19890 PF13610 DDE domain BMG03_19905 PF03597 Cytochrome oxidase maturation protein cbb3-type BMG03_19915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BMG03_19915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BMG03_19915 PF00034 Cytochrome c BMG03_19930 PF00115 Cytochrome C and Quinol oxidase polypeptide I BMG03_19935 PF02082 Transcriptional regulator BMG03_19945 PF01814 Hemerythrin HHE cation binding domain BMG03_19945 PF04405 Domain of Unknown function (DUF542) BMG03_19955 PF04343 Protein of unknown function, DUF488 BMG03_19960 PF03060 Nitronate monooxygenase BMG03_19965 PF01812 5-formyltetrahydrofolate cyclo-ligase family BMG03_19970 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BMG03_19970 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BMG03_19980 PF13610 DDE domain BMG03_19985 PF01266 FAD dependent oxidoreductase BMG03_19990 PF05544 Proline racemase BMG03_19995 PF00701 Dihydrodipicolinate synthetase family BMG03_20000 PF07729 FCD domain BMG03_20000 PF00392 Bacterial regulatory proteins, gntR family BMG03_20005 PF01979 Amidohydrolase family BMG03_20015 PF13610 DDE domain BMG03_20025 PF01613 Flavin reductase like domain BMG03_20030 PF01527 Transposase BMG03_20050 PF13007 Transposase C of IS166 homeodomain BMG03_20050 PF13817 IS66 C-terminal element BMG03_20050 PF13005 zinc-finger binding domain of transposase IS66 BMG03_20050 PF03050 Transposase IS66 family BMG03_20055 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BMG03_20065 PF00005 ABC transporter BMG03_20070 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_20075 PF00528 Binding-protein-dependent transport system inner membrane component BMG03_20080 PF00497 Bacterial extracellular solute-binding proteins, family 3 BMG03_20090 PF00535 Glycosyl transferase family 2 BMG03_20140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BMG03_20140 PF00529 HlyD membrane-fusion protein of T1SS BMG03_20145 PF07690 Major Facilitator Superfamily BMG03_20160 PF07689 KaiB domain BMG03_20160 PF00512 His Kinase A (phospho-acceptor) domain BMG03_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BMG03_20175 PF13333 Integrase core domain BMG03_20175 PF00665 Integrase core domain BMG03_20175 PF13276 HTH-like domain BMG03_20185 PF09335 SNARE associated Golgi protein BMG03_20205 PF01544 CorA-like Mg2+ transporter protein BMG03_20215 PF03706 Lysylphosphatidylglycerol synthase TM region BMG03_20215 PF09924 Uncharacterised conserved protein (DUF2156) BMG03_20250 PF13683 Integrase core domain BMG03_20250 PF13276 HTH-like domain BMG03_20255 PF01527 Transposase BMG03_20290 PF00239 Resolvase, N terminal domain BMG03_20305 PF13614 AAA domain BMG03_20315 PF11800 Replication protein C C-terminal region BMG03_20315 PF03428 Replication protein C N-terminal domain BMG03_20345 PF17762 HTH domain found in ParB protein BMG03_20345 PF02195 ParB-like nuclease domain BMG03_20435 PF03432 Relaxase/Mobilisation nuclease domain BMG03_20440 PF02534 Type IV secretory system Conjugative DNA transfer BMG03_20470 PF00873 AcrB/AcrD/AcrF family BMG03_20515 PF00437 Type II/IV secretion system protein BMG03_20520 PF03743 Bacterial conjugation TrbI-like protein BMG03_20540 PF01551 Peptidase family M23 BMG03_20540 PF01464 Transglycosylase SLT domain BMG03_20540 PF10145 Phage-related minor tail protein BMG03_20560 PF01464 Transglycosylase SLT domain BMG03_20560 PF10145 Phage-related minor tail protein BMG03_20560 PF01551 Peptidase family M23 BMG03_20595 PF01734 Patatin-like phospholipase BMG03_20605 PF00664 ABC transporter transmembrane region BMG03_20605 PF00005 ABC transporter BMG03_20610 PF00664 ABC transporter transmembrane region BMG03_20610 PF00005 ABC transporter BMG03_20635 PF02322 Cytochrome bd terminal oxidase subunit II BMG03_20640 PF01654 Cytochrome bd terminal oxidase subunit I