locus-tag class description Thivi_0001 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0001 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_0001 IPR006258 Dihydrolipoamide dehydrogenase Thivi_0001 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Thivi_0001 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thivi_0001 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Thivi_0001 IPR023753 FAD/NAD(P)-binding domain Thivi_0003 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_0003 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_0003 IPR004839 Aminotransferase, class I/classII Thivi_0003 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0004 IPR036291 NAD(P)-binding domain superfamily Thivi_0004 IPR019811 Homoserine dehydrogenase, conserved site Thivi_0004 IPR001342 Homoserine dehydrogenase, catalytic Thivi_0004 IPR016204 Homoserine dehydrogenase Thivi_0004 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Thivi_0004 IPR002912 ACT domain Thivi_0007 IPR022967 RNA-binding domain, S1 Thivi_0007 IPR018974 Tex-like protein, N-terminal Thivi_0007 IPR003029 S1 domain Thivi_0007 IPR032639 Tex protein, YqgF-like domain Thivi_0007 IPR010994 RuvA domain 2-like Thivi_0007 IPR012337 Ribonuclease H-like superfamily Thivi_0007 IPR012340 Nucleic acid-binding, OB-fold Thivi_0007 IPR041692 HHH domain 9 Thivi_0007 IPR006641 YqgF/RNase H-like domain Thivi_0007 IPR023323 Tex-like domain superfamily Thivi_0007 IPR023319 Tex-like protein, HTH domain superfamily Thivi_0007 IPR037027 YqgF/RNase H-like domain superfamily Thivi_0013 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria Thivi_0013 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Thivi_0014 IPR011332 Zinc-binding ribosomal protein Thivi_0014 IPR002677 Ribosomal protein L32p Thivi_0015 IPR003664 Fatty acid synthesis PlsX protein Thivi_0015 IPR012281 Phospholipid biosynthesis protein, PlsX-like Thivi_0016 IPR016039 Thiolase-like Thivi_0016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thivi_0016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Thivi_0016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Thivi_0017 IPR001227 Acyl transferase domain superfamily Thivi_0017 IPR014043 Acyl transferase Thivi_0017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_0017 IPR024925 Malonyl CoA-acyl carrier protein transacylase Thivi_0017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Thivi_0017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Thivi_0018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Thivi_0018 IPR036291 NAD(P)-binding domain superfamily Thivi_0018 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_0019 IPR036736 ACP-like superfamily Thivi_0019 IPR003231 Acyl carrier protein (ACP) Thivi_0019 IPR006162 Phosphopantetheine attachment site Thivi_0019 IPR009081 Phosphopantetheine binding ACP domain Thivi_0020 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_0020 IPR000794 Beta-ketoacyl synthase Thivi_0020 IPR018201 Beta-ketoacyl synthase, active site Thivi_0020 IPR016039 Thiolase-like Thivi_0020 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thivi_0020 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Thivi_0020 IPR014031 Beta-ketoacyl synthase, C-terminal Thivi_0021 IPR036038 Aminotransferase-like, PLP-dependent enzymes Thivi_0021 IPR018300 Aminotransferase, class IV, conserved site Thivi_0021 IPR001544 Aminotransferase class IV Thivi_0021 IPR017824 Aminodeoxychorismate lyase, class IV Thivi_0022 IPR003770 Endolytic murein transglycosylase Thivi_0023 IPR039430 Thymidylate kinase-like domain Thivi_0023 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0023 IPR018094 Thymidylate kinase Thivi_0024 IPR004622 DNA polymerase III, delta prime subunit Thivi_0024 IPR015199 DNA polymerase III, delta subunit, C-terminal Thivi_0024 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0026 IPR001130 TatD family Thivi_0026 IPR032466 Metal-dependent hydrolase Thivi_0026 IPR015991 Uncharacterised hydrolase TatD-type Thivi_0026 IPR018228 Deoxyribonuclease, TatD-related, conserved site Thivi_0027 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type Thivi_0027 IPR007498 Intermembrane transport protein PqiA-like Thivi_0028 IPR003399 Mce/MlaD Thivi_0032 IPR001789 Signal transduction response regulator, receiver domain Thivi_0032 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0032 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0032 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0032 IPR011006 CheY-like superfamily Thivi_0033 IPR005467 Histidine kinase domain Thivi_0033 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0033 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0033 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0033 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0033 IPR038515 CpxA, periplasmic domain superfamily Thivi_0033 IPR032404 Two-component sensor protein CpxA, periplasmic domain Thivi_0033 IPR003660 HAMP domain Thivi_0033 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0036 IPR003660 HAMP domain Thivi_0036 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0038 IPR011006 CheY-like superfamily Thivi_0038 IPR003660 HAMP domain Thivi_0038 IPR001789 Signal transduction response regulator, receiver domain Thivi_0038 IPR038188 TorS, sensor domain superfamily Thivi_0038 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0038 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0038 IPR037952 Sensor histidine kinase TorS, sensor domain Thivi_0038 IPR036641 HPT domain superfamily Thivi_0038 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0038 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0038 IPR005467 Histidine kinase domain Thivi_0038 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0038 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0039 IPR000160 GGDEF domain Thivi_0039 IPR005330 MHYT domain Thivi_0039 IPR001633 EAL domain Thivi_0039 IPR035919 EAL domain superfamily Thivi_0039 IPR029787 Nucleotide cyclase Thivi_0041 IPR001036 Acriflavin resistance protein Thivi_0041 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0042 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_0042 IPR022824 Multidrug resistance protein MdtA Thivi_0042 IPR006143 RND efflux pump, membrane fusion protein Thivi_0045 IPR011810 Cyanophycin synthetase Thivi_0045 IPR004101 Mur ligase, C-terminal Thivi_0045 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_0045 IPR013815 ATP-grasp fold, subdomain 1 Thivi_0045 IPR013651 ATP-grasp fold, RimK-type Thivi_0045 IPR011761 ATP-grasp fold Thivi_0045 IPR013221 Mur ligase, central Thivi_0045 IPR036565 Mur-like, catalytic domain superfamily Thivi_0046 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0046 IPR039421 Type I protein exporter Thivi_0046 IPR017871 ABC transporter, conserved site Thivi_0046 IPR003593 AAA+ ATPase domain Thivi_0046 IPR011527 ABC transporter type 1, transmembrane domain Thivi_0046 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_0046 IPR003439 ABC transporter-like Thivi_0046 IPR011917 ABC transporter, lipid A export, MsbA Thivi_0047 IPR029052 Metallo-dependent phosphatase-like Thivi_0047 IPR019079 Capsule synthesis protein, CapA Thivi_0050 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thivi_0050 IPR005482 Biotin carboxylase, C-terminal Thivi_0050 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Thivi_0050 IPR011761 ATP-grasp fold Thivi_0050 IPR011764 Biotin carboxylation domain Thivi_0050 IPR011054 Rudiment single hybrid motif Thivi_0050 IPR016185 Pre-ATP-grasp domain superfamily Thivi_0050 IPR005481 Biotin carboxylase-like, N-terminal domain Thivi_0052 IPR000891 Pyruvate carboxyltransferase Thivi_0052 IPR011053 Single hybrid motif Thivi_0052 IPR001882 Biotin-binding site Thivi_0052 IPR000089 Biotin/lipoyl attachment Thivi_0052 IPR003379 Carboxylase, conserved domain Thivi_0052 IPR013785 Aldolase-type TIM barrel Thivi_0052 IPR005776 Oxaloacetate decarboxylase, alpha subunit Thivi_0053 IPR005170 Transporter-associated domain Thivi_0053 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_0053 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_0053 IPR000644 CBS domain Thivi_0053 IPR002550 CNNM, transmembrane domain Thivi_0056 IPR004772 TrkH potassium transport family Thivi_0056 IPR003445 Cation transporter Thivi_0057 IPR006036 Potassium uptake protein TrkA Thivi_0057 IPR036291 NAD(P)-binding domain superfamily Thivi_0057 IPR006037 Regulator of K+ conductance, C-terminal Thivi_0057 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_0057 IPR003148 Regulator of K+ conductance, N-terminal Thivi_0058 IPR042159 Flavin-trafficking protein ApbE Thivi_0058 IPR003374 ApbE-like superfamily Thivi_0058 IPR024932 Flavin transferase ApbE Thivi_0059 IPR003369 Sec-independent protein translocase protein TatA/B/E Thivi_0059 IPR006312 Sec-independent protein translocase protein TatA/E Thivi_0061 IPR002781 Transmembrane protein TauE-like Thivi_0064 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0064 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0064 IPR036641 HPT domain superfamily Thivi_0064 IPR033414 Periplasmic sensor domain Thivi_0064 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0064 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0064 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0064 IPR005467 Histidine kinase domain Thivi_0064 IPR001789 Signal transduction response regulator, receiver domain Thivi_0064 IPR003660 HAMP domain Thivi_0064 IPR011006 CheY-like superfamily Thivi_0064 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0065 IPR000160 GGDEF domain Thivi_0065 IPR013656 PAS fold-4 Thivi_0065 IPR000700 PAS-associated, C-terminal Thivi_0065 IPR029787 Nucleotide cyclase Thivi_0065 IPR000014 PAS domain Thivi_0065 IPR035965 PAS domain superfamily Thivi_0067 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_0067 IPR037021 RnfH superfamily Thivi_0067 IPR005346 RnfH protein Thivi_0068 IPR010968 Ion-translocating oxidoreductase complex subunit E Thivi_0068 IPR003667 NqrDE/RnfAE Thivi_0069 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Thivi_0069 IPR007329 FMN-binding Thivi_0070 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Thivi_0070 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Thivi_0071 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0071 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0071 IPR019554 Soluble ligand binding domain Thivi_0071 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_0071 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_0071 IPR009051 Alpha-helical ferredoxin Thivi_0071 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Thivi_0071 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_0072 IPR007202 4Fe-4S domain Thivi_0072 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0072 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0072 IPR011005 Dihydropteroate synthase-like Thivi_0072 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Thivi_0072 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Thivi_0073 IPR003667 NqrDE/RnfAE Thivi_0073 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Thivi_0076 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0076 IPR025201 Sensor protein KdpD, transmembrane domain Thivi_0076 IPR038318 KdpD, transmembrane domain superfamily Thivi_0076 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0076 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0076 IPR005467 Histidine kinase domain Thivi_0076 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0076 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0076 IPR003018 GAF domain Thivi_0076 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal Thivi_0076 IPR029016 GAF-like domain superfamily Thivi_0081 IPR003820 Potassium-transporting ATPase C chain Thivi_0082 IPR001757 P-type ATPase Thivi_0082 IPR023299 P-type ATPase, cytoplasmic domain N Thivi_0082 IPR006391 P-type ATPase, B chain, subfamily IA Thivi_0082 IPR023214 HAD superfamily Thivi_0082 IPR018303 P-type ATPase, phosphorylation site Thivi_0082 IPR036412 HAD-like superfamily Thivi_0082 IPR008250 P-type ATPase, A domain superfamily Thivi_0082 IPR023298 P-type ATPase, transmembrane domain superfamily Thivi_0083 IPR004623 Potassium-transporting ATPase A chain Thivi_0085 IPR006015 Universal stress protein A family Thivi_0085 IPR006016 UspA Thivi_0087 IPR003369 Sec-independent protein translocase protein TatA/B/E Thivi_0087 IPR018448 Twin-arginine translocation protein TatB Thivi_0088 IPR003369 Sec-independent protein translocase protein TatA/B/E Thivi_0088 IPR006312 Sec-independent protein translocase protein TatA/E Thivi_0089 IPR004481 Sodium/potassium/calcium exchanger Thivi_0089 IPR004837 Sodium/calcium exchanger membrane region Thivi_0090 IPR012127 Cytochrome c prime Thivi_0090 IPR010980 Cytochrome c/b562 Thivi_0090 IPR015984 Cytochrome c prime, subgroup Thivi_0090 IPR002321 Cytochrome c, class II Thivi_0092 IPR018317 Queuosine biosynthesis protein QueC Thivi_0092 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0093 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Thivi_0093 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Thivi_0094 IPR007197 Radical SAM Thivi_0094 IPR024924 7-carboxy-7-deazaguanine synthase-like Thivi_0094 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type Thivi_0094 IPR013785 Aldolase-type TIM barrel Thivi_0096 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Thivi_0096 IPR010206 Poly(A) polymerase I Thivi_0096 IPR002646 Poly A polymerase, head domain Thivi_0096 IPR025866 Polymerase A arginine-rich C-terminal domain Thivi_0098 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_0098 IPR003700 Ketopantoate hydroxymethyltransferase Thivi_0098 IPR040442 Pyruvate kinase-like domain superfamily Thivi_0099 IPR003721 Pantoate-beta-alanine ligase Thivi_0099 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain Thivi_0099 IPR004821 Cytidyltransferase-like domain Thivi_0099 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0100 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_0100 IPR003190 Aspartate decarboxylase Thivi_0102 IPR013534 Starch synthase, catalytic domain Thivi_0102 IPR001296 Glycosyl transferase, family 1 Thivi_0102 IPR011835 Bacterial/plant glycogen synthase Thivi_0103 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding Thivi_0103 IPR036291 NAD(P)-binding domain superfamily Thivi_0103 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal Thivi_0103 IPR019796 Glucose-6-phosphate dehydrogenase, active site Thivi_0103 IPR001282 Glucose-6-phosphate dehydrogenase Thivi_0105 IPR001672 Phosphoglucose isomerase (PGI) Thivi_0105 IPR035482 Phosphoglucose isomerase, SIS domain 2 Thivi_0105 IPR035476 Phosphoglucose isomerase, SIS domain 1 Thivi_0105 IPR018189 Phosphoglucose isomerase, conserved site Thivi_0105 IPR023096 Phosphoglucose isomerase, C-terminal Thivi_0106 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0106 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0106 IPR022138 Helicase SWF/SNF-related Thivi_0106 IPR000330 SNF2-related, N-terminal domain Thivi_0106 IPR001650 Helicase, C-terminal Thivi_0106 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_0115 IPR010413 Intracellular heme transport protein HutX-like Thivi_0117 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0117 IPR002481 Ferric-uptake regulator Thivi_0117 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0125 IPR003439 ABC transporter-like Thivi_0125 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0125 IPR017871 ABC transporter, conserved site Thivi_0125 IPR003593 AAA+ ATPase domain Thivi_0128 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_0128 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL Thivi_0128 IPR001296 Glycosyl transferase, family 1 Thivi_0131 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0131 IPR001173 Glycosyltransferase 2-like Thivi_0135 IPR001296 Glycosyl transferase, family 1 Thivi_0135 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_0135 IPR017814 Mycothiol biosynthesis protein, MshA Thivi_0136 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_0136 IPR001296 Glycosyl transferase, family 1 Thivi_0137 IPR039528 DPM1-like Thivi_0137 IPR001173 Glycosyltransferase 2-like Thivi_0137 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0148 IPR002559 Transposase, IS4-like Thivi_0148 IPR032806 H repeat-associated protein, N-terminal Thivi_0153 IPR011703 ATPase, AAA-3 Thivi_0153 IPR041628 ChlI/MoxR, AAA lid domain Thivi_0153 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0155 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Thivi_0155 IPR002931 Transglutaminase-like Thivi_0155 IPR025403 Domain of unknown function DUF4129 Thivi_0155 IPR038765 Papain-like cysteine peptidase superfamily Thivi_0156 IPR004923 Iron permease FTR1/Fip1/EfeU Thivi_0162 IPR023480 Uncharacterised protein family UPF0312/YceI Thivi_0162 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thivi_0162 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Thivi_0163 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thivi_0163 IPR016174 Di-haem cytochrome, transmembrane Thivi_0166 IPR008258 Transglycosylase SLT domain 1 Thivi_0166 IPR010090 Phage tail tape measure protein Thivi_0166 IPR016047 Peptidase M23 Thivi_0166 IPR023346 Lysozyme-like domain superfamily Thivi_0166 IPR011055 Duplicated hybrid motif Thivi_0166 IPR000189 Prokaryotic transglycosylase, active site Thivi_0168 IPR011528 Nuclease-related domain, NERD Thivi_0174 IPR001387 Cro/C1-type helix-turn-helix domain Thivi_0174 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thivi_0174 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Thivi_0181 IPR004846 Type II/III secretion system Thivi_0181 IPR013356 Type II secretion system GspD Thivi_0181 IPR004845 Type II secretion system GspD, conserved site Thivi_0181 IPR001775 GspD/PilQ family Thivi_0181 IPR005644 NolW-like Thivi_0181 IPR038591 NolW-like superfamily Thivi_0183 IPR003004 GspF/PilC family Thivi_0183 IPR001992 Type II secretion system conserved site Thivi_0183 IPR042094 Type II secretion system F domain superfamily Thivi_0183 IPR018076 Type II secretion system F domain Thivi_0183 IPR011850 General secretion pathway protein F Thivi_0184 IPR042181 Type II secretion system, protein E, N-terminal Thivi_0184 IPR003593 AAA+ ATPase domain Thivi_0184 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0184 IPR001482 Type II/IV secretion system protein Thivi_0184 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_0184 IPR013369 Type II secretion system GspE Thivi_0185 IPR003593 AAA+ ATPase domain Thivi_0185 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0185 IPR006321 Pilus retraction protein PilT Thivi_0185 IPR001482 Type II/IV secretion system protein Thivi_0196 IPR006120 Resolvase, HTH domain Thivi_0196 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Thivi_0196 IPR006118 Recombinase, conserved site Thivi_0196 IPR006119 Resolvase, N-terminal catalytic domain Thivi_0201 IPR001633 EAL domain Thivi_0201 IPR035919 EAL domain superfamily Thivi_0201 IPR029787 Nucleotide cyclase Thivi_0201 IPR000160 GGDEF domain Thivi_0201 IPR005330 MHYT domain Thivi_0209 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_0209 IPR023214 HAD superfamily Thivi_0209 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_0209 IPR006439 HAD hydrolase, subfamily IA Thivi_0209 IPR036412 HAD-like superfamily Thivi_0210 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0210 IPR011703 ATPase, AAA-3 Thivi_0210 IPR041628 ChlI/MoxR, AAA lid domain Thivi_0212 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0212 IPR002881 Domain of unknown function DUF58 Thivi_0214 IPR014188 Acrylyl-CoA reductase AcuI Thivi_0214 IPR020843 Polyketide synthase, enoylreductase domain Thivi_0214 IPR036291 NAD(P)-binding domain superfamily Thivi_0214 IPR011032 GroES-like superfamily Thivi_0214 IPR013154 Alcohol dehydrogenase, N-terminal Thivi_0214 IPR013149 Alcohol dehydrogenase, C-terminal Thivi_0215 IPR016084 Haem oxygenase-like, multi-helical Thivi_0215 IPR016053 Haem oxygenase-like Thivi_0216 IPR000943 RNA polymerase sigma-70 Thivi_0216 IPR007630 RNA polymerase sigma-70 region 4 Thivi_0216 IPR013325 RNA polymerase sigma factor, region 2 Thivi_0216 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0216 IPR007627 RNA polymerase sigma-70 region 2 Thivi_0216 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0216 IPR014284 RNA polymerase sigma-70 like domain Thivi_0216 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria Thivi_0217 IPR023190 Phosphoserine phosphatase, domain 2 Thivi_0217 IPR023214 HAD superfamily Thivi_0217 IPR036412 HAD-like superfamily Thivi_0217 IPR002912 ACT domain Thivi_0218 IPR036909 Cytochrome c-like domain superfamily Thivi_0218 IPR004852 Di-haem cytochrome c peroxidase Thivi_0218 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase Thivi_0218 IPR009056 Cytochrome c-like domain Thivi_0219 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0219 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Thivi_0219 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_0219 IPR022879 V-type ATP synthase regulatory subunit B/beta Thivi_0221 IPR007197 Radical SAM Thivi_0221 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Thivi_0221 IPR022462 Lysine-2,3-aminomutase-like Thivi_0221 IPR013785 Aldolase-type TIM barrel Thivi_0222 IPR020599 Translation elongation factor P/YeiP Thivi_0222 IPR013852 Translation elongation factor P/YeiP, conserved site Thivi_0222 IPR011768 Translation elongation factor P Thivi_0222 IPR001059 Translation elongation factor P/YeiP, central Thivi_0222 IPR013185 Translation elongation factor, KOW-like Thivi_0222 IPR008991 Translation protein SH3-like domain superfamily Thivi_0222 IPR014722 Ribosomal protein L2, domain 2 Thivi_0222 IPR012340 Nucleic acid-binding, OB-fold Thivi_0222 IPR015365 Elongation factor P, C-terminal Thivi_0223 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_0223 IPR004525 Elongation factor P--(R)-beta-lysine ligase Thivi_0223 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Thivi_0223 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thivi_0226 IPR029052 Metallo-dependent phosphatase-like Thivi_0226 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_0228 IPR017853 Glycoside hydrolase superfamily Thivi_0228 IPR003385 Glycoside hydrolase, family 77 Thivi_0231 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0231 IPR013153 PrkA AAA domain Thivi_0231 IPR010650 PrkA C-terminal domain Thivi_0231 IPR016230 Serine-protein kinase, PrkA Thivi_0232 IPR006698 Uncharacterised protein family UPF0229 Thivi_0232 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0233 IPR007390 Sporulation stage V, protein R Thivi_0235 IPR005490 L,D-transpeptidase catalytic domain Thivi_0235 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_0236 IPR004721 Dihydroorotase homodimeric type Thivi_0236 IPR006680 Amidohydrolase-related Thivi_0236 IPR002195 Dihydroorotase, conserved site Thivi_0236 IPR032466 Metal-dependent hydrolase Thivi_0237 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Thivi_0237 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal Thivi_0237 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain Thivi_0237 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising Thivi_0237 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Thivi_0237 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site Thivi_0239 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0239 IPR001977 Dephospho-CoA kinase Thivi_0240 IPR010627 Peptidase A24A, N-terminal Thivi_0240 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thivi_0240 IPR000045 Prepilin type IV endopeptidase, peptidase domain Thivi_0241 IPR018076 Type II secretion system F domain Thivi_0241 IPR042094 Type II secretion system F domain superfamily Thivi_0241 IPR001992 Type II secretion system conserved site Thivi_0241 IPR003004 GspF/PilC family Thivi_0242 IPR013374 ATPase, type IV, pilus assembly, PilB Thivi_0242 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0242 IPR001482 Type II/IV secretion system protein Thivi_0242 IPR042181 Type II secretion system, protein E, N-terminal Thivi_0242 IPR007831 General secretory system II, protein E, N-terminal Thivi_0242 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_0244 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_0244 IPR011904 Acetate-CoA ligase Thivi_0244 IPR042099 AMP-dependent synthetase-like superfamily Thivi_0244 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain Thivi_0244 IPR000873 AMP-dependent synthetase/ligase Thivi_0244 IPR020845 AMP-binding, conserved site Thivi_0246 IPR000644 CBS domain Thivi_0247 IPR019899 Sodium/solute symporter, VC2705 subfamily Thivi_0247 IPR001734 Sodium/solute symporter Thivi_0247 IPR038377 Sodium/glucose symporter superfamily Thivi_0249 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Thivi_0249 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_0249 IPR037158 Threonine synthase, N-terminal domain superfamily Thivi_0249 IPR004450 Threonine synthase-like Thivi_0249 IPR029144 Threonine synthase, N-terminal Thivi_0249 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0250 IPR013785 Aldolase-type TIM barrel Thivi_0250 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thivi_0250 IPR005671 2-isopropylmalate synthase, bacterial-type Thivi_0250 IPR000891 Pyruvate carboxyltransferase Thivi_0250 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thivi_0250 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Thivi_0257 IPR003317 Cytochrome ubiquinol oxidase subunit 2 Thivi_0258 IPR002585 Cytochrome ubiquinol oxidase subunit 1 Thivi_0263 IPR011299 PTS system glucose-specific IIBC component Thivi_0263 IPR001996 Phosphotransferase system, IIB component, type 1 Thivi_0263 IPR003352 Phosphotransferase system, EIIC Thivi_0263 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component Thivi_0263 IPR013013 Phosphotransferase system, EIIC component, type 1 Thivi_0263 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site Thivi_0263 IPR036878 Glucose permease domain IIB Thivi_0264 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Thivi_0264 IPR002178 PTS EIIA type-2 domain Thivi_0264 IPR006318 Phosphotransferase system, enzyme I-like Thivi_0264 IPR016152 Phosphotransferase/anion transporter Thivi_0264 IPR035895 HPr-like superfamily Thivi_0264 IPR018274 PEP-utilising enzyme, active site Thivi_0264 IPR040442 Pyruvate kinase-like domain superfamily Thivi_0264 IPR036637 Phosphohistidine domain superfamily Thivi_0264 IPR023151 PEP-utilising enzyme, conserved site Thivi_0264 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_0264 IPR036618 PtsI, HPr-binding domain superfamily Thivi_0264 IPR000121 PEP-utilising enzyme, C-terminal Thivi_0264 IPR008279 PEP-utilising enzyme, mobile domain Thivi_0264 IPR008731 Phosphotransferase system, enzyme I N-terminal Thivi_0264 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Thivi_0264 IPR000032 Phosphocarrier protein HPr-like Thivi_0266 IPR024671 Autophagy-related protein 22-like Thivi_0266 IPR020846 Major facilitator superfamily domain Thivi_0266 IPR036259 MFS transporter superfamily Thivi_0267 IPR038590 YaeQ superfamily Thivi_0267 IPR009822 YaeQ Thivi_0267 IPR011335 Restriction endonuclease type II-like Thivi_0270 IPR001173 Glycosyltransferase 2-like Thivi_0270 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0273 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Thivi_0273 IPR018320 DNA polymerase 1 Thivi_0273 IPR012337 Ribonuclease H-like superfamily Thivi_0273 IPR002421 5'-3' exonuclease, N-terminal Thivi_0273 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Thivi_0273 IPR008918 Helix-hairpin-helix motif, class 2 Thivi_0273 IPR036397 Ribonuclease H superfamily Thivi_0273 IPR029060 PIN-like domain superfamily Thivi_0273 IPR002298 DNA polymerase A Thivi_0273 IPR019760 DNA-directed DNA polymerase, family A, conserved site Thivi_0273 IPR001098 DNA-directed DNA polymerase, family A, palm domain Thivi_0273 IPR020045 DNA polymerase I-like, H3TH domain Thivi_0273 IPR002562 3'-5' exonuclease domain Thivi_0274 IPR035889 Light-harvesting complex Thivi_0274 IPR002362 Antenna complex, beta subunit Thivi_0274 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0274 IPR000066 Antenna complex, alpha/beta subunit Thivi_0276 IPR002362 Antenna complex, beta subunit Thivi_0276 IPR000066 Antenna complex, alpha/beta subunit Thivi_0276 IPR035889 Light-harvesting complex Thivi_0276 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0277 IPR035889 Light-harvesting complex Thivi_0277 IPR000066 Antenna complex, alpha/beta subunit Thivi_0277 IPR018332 Antenna complex, alpha subunit Thivi_0277 IPR002361 Antenna complex, alpha subunit conserved site Thivi_0278 IPR000066 Antenna complex, alpha/beta subunit Thivi_0278 IPR002362 Antenna complex, beta subunit Thivi_0278 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0278 IPR035889 Light-harvesting complex Thivi_0279 IPR002361 Antenna complex, alpha subunit conserved site Thivi_0279 IPR018332 Antenna complex, alpha subunit Thivi_0279 IPR035889 Light-harvesting complex Thivi_0279 IPR000066 Antenna complex, alpha/beta subunit Thivi_0281 IPR002362 Antenna complex, beta subunit Thivi_0281 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0281 IPR035889 Light-harvesting complex Thivi_0281 IPR000066 Antenna complex, alpha/beta subunit Thivi_0282 IPR035889 Light-harvesting complex Thivi_0282 IPR002361 Antenna complex, alpha subunit conserved site Thivi_0282 IPR018332 Antenna complex, alpha subunit Thivi_0282 IPR000066 Antenna complex, alpha/beta subunit Thivi_0284 IPR000066 Antenna complex, alpha/beta subunit Thivi_0284 IPR002362 Antenna complex, beta subunit Thivi_0284 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0284 IPR035889 Light-harvesting complex Thivi_0285 IPR018332 Antenna complex, alpha subunit Thivi_0285 IPR000066 Antenna complex, alpha/beta subunit Thivi_0285 IPR002361 Antenna complex, alpha subunit conserved site Thivi_0285 IPR035889 Light-harvesting complex Thivi_0286 IPR003593 AAA+ ATPase domain Thivi_0286 IPR030665 Circadian clock protein kinase KaiC Thivi_0286 IPR014774 KaiC-like domain Thivi_0286 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0286 IPR010624 KaiC domain Thivi_0287 IPR011649 KaiB domain Thivi_0287 IPR039022 Circadian clock protein KaiB-like Thivi_0287 IPR036249 Thioredoxin-like superfamily Thivi_0288 IPR011649 KaiB domain Thivi_0288 IPR013474 Circadian clock protein KaiB Thivi_0288 IPR036249 Thioredoxin-like superfamily Thivi_0288 IPR039022 Circadian clock protein KaiB-like Thivi_0289 IPR000014 PAS domain Thivi_0289 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0289 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0289 IPR005467 Histidine kinase domain Thivi_0289 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0289 IPR013767 PAS fold Thivi_0289 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0289 IPR031967 PhoR, single Cache-like domain Thivi_0289 IPR035965 PAS domain superfamily Thivi_0289 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0290 IPR011006 CheY-like superfamily Thivi_0290 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_0290 IPR001789 Signal transduction response regulator, receiver domain Thivi_0290 IPR000792 Transcription regulator LuxR, C-terminal Thivi_0290 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0292 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0292 IPR040766 RapA, N-terminal Tudor-like domain 2 Thivi_0292 IPR023949 RNA polymerase-associated protein RapA Thivi_0292 IPR001650 Helicase, C-terminal Thivi_0292 IPR022737 RNA polymerase recycling, bacterial, C-terminal Thivi_0292 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_0292 IPR000330 SNF2-related, N-terminal domain Thivi_0292 IPR040765 RapA, N-terminal Tudor like domain 1 Thivi_0292 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0293 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_0293 IPR020084 NUDIX hydrolase, conserved site Thivi_0293 IPR000086 NUDIX hydrolase domain Thivi_0293 IPR004385 Nucleoside diphosphate pyrophosphatase Thivi_0294 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_0294 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Thivi_0294 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0294 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0294 IPR001789 Signal transduction response regulator, receiver domain Thivi_0294 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0294 IPR011006 CheY-like superfamily Thivi_0295 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR Thivi_0295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0295 IPR021766 Phosphate regulon sensor protein PhoR Thivi_0295 IPR013767 PAS fold Thivi_0295 IPR000014 PAS domain Thivi_0295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0295 IPR005467 Histidine kinase domain Thivi_0295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0295 IPR035965 PAS domain superfamily Thivi_0295 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0298 IPR001204 Phosphate transporter Thivi_0299 IPR018445 Putative phosphate transport regulator Thivi_0299 IPR002727 Protein of unknown function DUF47 Thivi_0299 IPR038078 PhoU-like domain superfamily Thivi_0300 IPR020816 Histone-like DNA-binding protein, conserved site Thivi_0300 IPR000119 Histone-like DNA-binding protein Thivi_0300 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Thivi_0300 IPR005685 Integration host factor, beta subunit Thivi_0301 IPR000110 Ribosomal protein S1 Thivi_0301 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 IPR003029 S1 domain Thivi_0301 IPR022967 RNA-binding domain, S1 Thivi_0302 IPR011994 Cytidylate kinase domain Thivi_0302 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0302 IPR003136 Cytidylate kinase Thivi_0303 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Thivi_0303 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Thivi_0303 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Thivi_0303 IPR001986 Enolpyruvate transferase domain Thivi_0303 IPR036968 Enolpyruvate transferase domain superfamily Thivi_0307 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0307 IPR003660 HAMP domain Thivi_0307 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0307 IPR033480 Single Cache domain 2 Thivi_0308 IPR001789 Signal transduction response regulator, receiver domain Thivi_0308 IPR011006 CheY-like superfamily Thivi_0310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0310 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0310 IPR036061 CheW-like domain superfamily Thivi_0310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0310 IPR036641 HPT domain superfamily Thivi_0310 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_0310 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_0310 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Thivi_0310 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0310 IPR035891 CheY-binding domain of CheA Thivi_0310 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Thivi_0310 IPR005467 Histidine kinase domain Thivi_0310 IPR002545 CheW-like domain Thivi_0311 IPR003660 HAMP domain Thivi_0311 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0311 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0312 IPR002545 CheW-like domain Thivi_0312 IPR036061 CheW-like domain superfamily Thivi_0312 IPR039315 Chemotaxis protein CheW Thivi_0313 IPR000390 Small multidrug resistance protein family Thivi_0314 IPR011006 CheY-like superfamily Thivi_0314 IPR001789 Signal transduction response regulator, receiver domain Thivi_0316 IPR035965 PAS domain superfamily Thivi_0316 IPR000700 PAS-associated, C-terminal Thivi_0316 IPR000014 PAS domain Thivi_0316 IPR013655 PAS fold-3 Thivi_0316 IPR029787 Nucleotide cyclase Thivi_0316 IPR007895 MASE1 Thivi_0316 IPR000160 GGDEF domain Thivi_0316 IPR013656 PAS fold-4 Thivi_0316 IPR001610 PAC motif Thivi_0316 IPR001633 EAL domain Thivi_0316 IPR035919 EAL domain superfamily Thivi_0317 IPR036061 CheW-like domain superfamily Thivi_0317 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0317 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0317 IPR036641 HPT domain superfamily Thivi_0317 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0317 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0317 IPR005467 Histidine kinase domain Thivi_0317 IPR035891 CheY-binding domain of CheA Thivi_0317 IPR015162 CheY binding Thivi_0317 IPR002545 CheW-like domain Thivi_0317 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_0317 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_0317 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0318 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0318 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0318 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0318 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_0318 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_0318 IPR000780 MCP methyltransferase, CheR-type Thivi_0319 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_0319 IPR005659 Chemoreceptor glutamine deamidase CheD Thivi_0319 IPR038592 CheD-like superfamily Thivi_0320 IPR001789 Signal transduction response regulator, receiver domain Thivi_0320 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Thivi_0320 IPR035909 Methylesterase CheB, C-terminal Thivi_0320 IPR011006 CheY-like superfamily Thivi_0320 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_0321 IPR035965 PAS domain superfamily Thivi_0321 IPR000700 PAS-associated, C-terminal Thivi_0321 IPR000014 PAS domain Thivi_0321 IPR001610 PAC motif Thivi_0321 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0321 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0321 IPR013655 PAS fold-3 Thivi_0322 IPR036061 CheW-like domain superfamily Thivi_0322 IPR002545 CheW-like domain Thivi_0322 IPR039315 Chemotaxis protein CheW Thivi_0323 IPR011006 CheY-like superfamily Thivi_0323 IPR035909 Methylesterase CheB, C-terminal Thivi_0323 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Thivi_0323 IPR001789 Signal transduction response regulator, receiver domain Thivi_0323 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_0325 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_0325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0325 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0325 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_0325 IPR000780 MCP methyltransferase, CheR-type Thivi_0325 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0326 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0326 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0326 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0326 IPR001789 Signal transduction response regulator, receiver domain Thivi_0326 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response Thivi_0326 IPR011006 CheY-like superfamily Thivi_0327 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_0327 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_0327 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Thivi_0327 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Thivi_0327 IPR036061 CheW-like domain superfamily Thivi_0327 IPR002545 CheW-like domain Thivi_0327 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0327 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0327 IPR005467 Histidine kinase domain Thivi_0327 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0327 IPR036641 HPT domain superfamily Thivi_0327 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0327 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0327 IPR035891 CheY-binding domain of CheA Thivi_0329 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0329 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0329 IPR001789 Signal transduction response regulator, receiver domain Thivi_0329 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_0329 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0329 IPR011006 CheY-like superfamily Thivi_0330 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0330 IPR003660 HAMP domain Thivi_0330 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_0330 IPR000727 Target SNARE coiled-coil homology domain Thivi_0330 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0331 IPR012292 Globin/Protoglobin Thivi_0331 IPR002645 STAS domain Thivi_0331 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain Thivi_0331 IPR036513 STAS domain superfamily Thivi_0332 IPR036513 STAS domain superfamily Thivi_0332 IPR002645 STAS domain Thivi_0333 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0333 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0334 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0334 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0336 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0336 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0336 IPR005467 Histidine kinase domain Thivi_0336 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0336 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0336 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0336 IPR001789 Signal transduction response regulator, receiver domain Thivi_0337 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_0337 IPR001789 Signal transduction response regulator, receiver domain Thivi_0337 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0337 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0337 IPR011006 CheY-like superfamily Thivi_0337 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0338 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0338 IPR025669 AAA domain Thivi_0339 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0339 IPR003660 HAMP domain Thivi_0339 IPR000727 Target SNARE coiled-coil homology domain Thivi_0339 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0339 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_0346 IPR003995 RTX toxin determinant A Thivi_0346 IPR011049 Serralysin-like metalloprotease, C-terminal Thivi_0346 IPR001343 RTX calcium-binding nonapeptide repeat Thivi_0346 IPR018511 Hemolysin-type calcium-binding conserved site Thivi_0346 IPR010566 Haemolysin-type calcium binding-related Thivi_0351 IPR025713 Motility protein B, N-terminal domain Thivi_0351 IPR036737 OmpA-like domain superfamily Thivi_0351 IPR006665 OmpA-like domain Thivi_0352 IPR022522 Flagellar motor stator, MotA Thivi_0352 IPR000540 Flagellar motor protein MotA, conserved site Thivi_0352 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0356 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_0356 IPR025944 Sigma-54 interaction domain, conserved site Thivi_0356 IPR009057 Homeobox-like domain superfamily Thivi_0356 IPR002197 DNA binding HTH domain, Fis-type Thivi_0356 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_0356 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0356 IPR003018 GAF domain Thivi_0356 IPR029016 GAF-like domain superfamily Thivi_0356 IPR003593 AAA+ ATPase domain Thivi_0357 IPR001624 Flagellar hook-basal body complex protein FliE Thivi_0358 IPR013556 Flagellar M-ring C-terminal Thivi_0358 IPR006182 Secretory protein YscJ/FliF Thivi_0358 IPR000067 Flagellar M-ring protein FliF Thivi_0359 IPR032779 Flagellar motor switch protein FliG, middle domain Thivi_0359 IPR011002 Flagellar motor switch protein FliG, alpha-helical Thivi_0359 IPR023087 Flagellar motor switch protein FliG, C-terminal Thivi_0359 IPR000090 Flagellar motor switch protein FliG Thivi_0359 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Thivi_0361 IPR003593 AAA+ ATPase domain Thivi_0361 IPR005714 ATPase, type III secretion system, FliI/YscN Thivi_0361 IPR032463 ATPase, type III secretion system, FliI Thivi_0361 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_0361 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thivi_0361 IPR020005 Flagellar export ATPase FliI, clade 1 Thivi_0361 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0361 IPR040627 T3SS EscN ATPase, C-terminal Thivi_0365 IPR001543 Surface presentation of antigen (SpoA) Thivi_0365 IPR036429 SpoA-like superfamily Thivi_0365 IPR028976 CheC-like superfamily Thivi_0365 IPR001689 Flagellar motor switch protein FliM Thivi_0366 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Thivi_0366 IPR012826 Flagellar motor switch FliN Thivi_0366 IPR001543 Surface presentation of antigen (SpoA) Thivi_0366 IPR036429 SpoA-like superfamily Thivi_0367 IPR022781 Flagellar biosynthesis protein, FliO Thivi_0368 IPR005837 Flagellar transport protein FliP Thivi_0368 IPR005838 Type III secretion system inner membrane P protein Thivi_0369 IPR006305 Flagellar biosynthesis protein FliQ Thivi_0369 IPR002191 Bacterial export protein family 3 Thivi_0370 IPR002010 Type III secretion system inner membrane R protein Thivi_0370 IPR006303 Flagellar biosynthesis protein FliR Thivi_0371 IPR006136 Flagellar biosynthetic protein FlhB Thivi_0371 IPR006135 Type III secretion system substrate exporter Thivi_0371 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_0372 IPR025505 FHIPEP conserved site Thivi_0372 IPR006301 Flagellar biosynthesis protein FlhA Thivi_0372 IPR042194 FHIPEP, domain 1 Thivi_0372 IPR042196 FHIPEP, domain 4 Thivi_0372 IPR001712 Type III secretion system FHIPEP Thivi_0372 IPR042193 FHIPEP, domain 3 Thivi_0373 IPR020006 Flagellar biosynthesis protein FlhF Thivi_0373 IPR003593 AAA+ ATPase domain Thivi_0373 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0373 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thivi_0374 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0374 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Thivi_0374 IPR025501 ATP binding protein MinD Thivi_0375 IPR014284 RNA polymerase sigma-70 like domain Thivi_0375 IPR000943 RNA polymerase sigma-70 Thivi_0375 IPR007627 RNA polymerase sigma-70 region 2 Thivi_0375 IPR007624 RNA polymerase sigma-70 region 3 Thivi_0375 IPR012845 RNA polymerase sigma factor, FliA/WhiG Thivi_0375 IPR013325 RNA polymerase sigma factor, region 2 Thivi_0375 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0375 IPR028617 RNA polymerase sigma factor FliA Thivi_0375 IPR007630 RNA polymerase sigma-70 region 4 Thivi_0376 IPR011006 CheY-like superfamily Thivi_0376 IPR001789 Signal transduction response regulator, receiver domain Thivi_0377 IPR007439 Chemotaxis phosphatase, CheZ Thivi_0379 IPR007439 Chemotaxis phosphatase, CheZ Thivi_0380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0380 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0380 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_0380 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_0380 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Thivi_0380 IPR036061 CheW-like domain superfamily Thivi_0380 IPR002545 CheW-like domain Thivi_0380 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding Thivi_0380 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0380 IPR036641 HPT domain superfamily Thivi_0380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0380 IPR035891 CheY-binding domain of CheA Thivi_0380 IPR005467 Histidine kinase domain Thivi_0381 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Thivi_0381 IPR035909 Methylesterase CheB, C-terminal Thivi_0381 IPR011006 CheY-like superfamily Thivi_0381 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_0381 IPR001789 Signal transduction response regulator, receiver domain Thivi_0382 IPR000540 Flagellar motor protein MotA, conserved site Thivi_0382 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0383 IPR006665 OmpA-like domain Thivi_0383 IPR036737 OmpA-like domain superfamily Thivi_0383 IPR025713 Motility protein B, N-terminal domain Thivi_0384 IPR039315 Chemotaxis protein CheW Thivi_0384 IPR036061 CheW-like domain superfamily Thivi_0384 IPR002545 CheW-like domain Thivi_0386 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_0386 IPR006135 Type III secretion system substrate exporter Thivi_0386 IPR006136 Flagellar biosynthetic protein FlhB Thivi_0392 IPR001789 Signal transduction response regulator, receiver domain Thivi_0392 IPR011006 CheY-like superfamily Thivi_0392 IPR002545 CheW-like domain Thivi_0392 IPR036061 CheW-like domain superfamily Thivi_0392 IPR024181 Chemotaxis response regulator CheV Thivi_0393 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0393 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0393 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_0393 IPR000780 MCP methyltransferase, CheR-type Thivi_0393 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0395 IPR001444 Flagellar basal body rod protein, N-terminal Thivi_0395 IPR006300 Flagellar basal-body rod protein FlgB Thivi_0395 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0396 IPR006299 Flagellar basal-body rod protein FlgC Thivi_0396 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0396 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0396 IPR001444 Flagellar basal body rod protein, N-terminal Thivi_0397 IPR025965 FlgD Ig-like domain Thivi_0397 IPR025963 FlgD Tudor-like domain Thivi_0397 IPR005648 Flagellar hook capping protein Thivi_0398 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0398 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0398 IPR011491 Flagellar hook protein FlgE Thivi_0398 IPR037058 Flagellar hook protein FlgE superfamily Thivi_0398 IPR001444 Flagellar basal body rod protein, N-terminal Thivi_0398 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0398 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0399 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0399 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0399 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0399 IPR001444 Flagellar basal body rod protein, N-terminal Thivi_0399 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0400 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0400 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0400 IPR001444 Flagellar basal body rod protein, N-terminal Thivi_0400 IPR012834 Flagellar basal-body rod FlgG Thivi_0400 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0400 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0401 IPR000527 Flagellar L-ring protein Thivi_0402 IPR001782 Flagellar P-ring protein Thivi_0403 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain Thivi_0403 IPR019301 Flagellar protein FlgJ, N-terminal Thivi_0403 IPR013377 Peptidoglycan hydrolase FlgJ Thivi_0404 IPR010810 Flagellin hook, IN motif Thivi_0404 IPR002371 Flagellar hook-associated protein 1 Thivi_0404 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0404 IPR002371 Flagellar hook-associated protein 1 Thivi_0404 IPR010810 Flagellin hook, IN motif Thivi_0404 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0405 IPR013384 Flagellar hook-associated protein 3 Thivi_0405 IPR001029 Flagellin, D0/D1 domain Thivi_0408 IPR039657 Dimethylallyltransferase Thivi_0408 IPR018022 IPP transferase Thivi_0408 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0409 IPR005001 RNA-binding protein Hfq Thivi_0409 IPR010920 LSM domain superfamily Thivi_0410 IPR025121 GTPase HflX, N-terminal Thivi_0410 IPR016496 GTPase HflX Thivi_0410 IPR035647 EF-G domain III/V-like Thivi_0410 IPR030394 HflX-type guanine nucleotide-binding (G) domain Thivi_0410 IPR042108 GTPase HflX, N-terminal domain superfamily Thivi_0410 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0410 IPR006073 GTP binding domain Thivi_0410 IPR032305 GTP-binding protein, middle domain Thivi_0411 IPR001972 Stomatin family Thivi_0411 IPR001107 Band 7 domain Thivi_0411 IPR036013 Band 7/SPFH domain superfamily Thivi_0411 IPR010201 HflK Thivi_0411 IPR020980 Menbrane protein HflK, N-terminal Thivi_0412 IPR010200 HflC Thivi_0412 IPR036013 Band 7/SPFH domain superfamily Thivi_0412 IPR001107 Band 7 domain Thivi_0413 IPR001789 Signal transduction response regulator, receiver domain Thivi_0413 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0413 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0413 IPR036641 HPT domain superfamily Thivi_0413 IPR011006 CheY-like superfamily Thivi_0413 IPR019247 Histidine kinase BarA, N-terminal Thivi_0413 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0413 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0413 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0413 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0413 IPR005467 Histidine kinase domain Thivi_0413 IPR003660 HAMP domain Thivi_0415 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Thivi_0415 IPR004517 ATP phosphoribosyltransferase regulatory subunit Thivi_0415 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Thivi_0416 IPR042109 Adenylosuccinate synthetase, domain 1 Thivi_0416 IPR042110 Adenylosuccinate synthetase, domain 2 Thivi_0416 IPR033128 Adenylosuccinate synthase, active site Thivi_0416 IPR001114 Adenylosuccinate synthetase Thivi_0416 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0416 IPR042111 Adenylosuccinate synthetase, domain 3 Thivi_0416 IPR018220 Adenylosuccinate synthase, GTP-binding site Thivi_0418 IPR029151 Periplasmic sensor-like domain superfamily Thivi_0418 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0418 IPR003660 HAMP domain Thivi_0418 IPR033479 Double Cache domain 1 Thivi_0418 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0418 IPR000727 Target SNARE coiled-coil homology domain Thivi_0420 IPR015946 K homology domain-like, alpha/beta Thivi_0420 IPR031166 EngA-type guanine nucleotide-binding (G) domain Thivi_0420 IPR016484 GTP-binding protein EngA Thivi_0420 IPR006073 GTP binding domain Thivi_0420 IPR032859 GTPase Der, C-terminal KH-domain-like Thivi_0420 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0420 IPR005225 Small GTP-binding protein domain Thivi_0420 IPR003593 AAA+ ATPase domain Thivi_0423 IPR032806 H repeat-associated protein, N-terminal Thivi_0423 IPR002559 Transposase, IS4-like Thivi_0426 IPR016181 Acyl-CoA N-acyltransferase Thivi_0426 IPR000182 GNAT domain Thivi_0430 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thivi_0430 IPR001387 Cro/C1-type helix-turn-helix domain Thivi_0430 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Thivi_0435 IPR003812 Fido domain Thivi_0435 IPR006473 Peptidase C58, YopT-type domain Thivi_0435 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen Thivi_0435 IPR024973 ESPR domain Thivi_0435 IPR012334 Pectin lyase fold Thivi_0435 IPR011050 Pectin lyase fold/virulence factor Thivi_0435 IPR025157 Hemagglutinin repeat Thivi_0435 IPR008638 Filamentous haemagglutinin, N-terminal Thivi_0435 IPR036597 Fido-like domain superfamily Thivi_0435 IPR038765 Papain-like cysteine peptidase superfamily Thivi_0435 IPR040198 Fido domain-containing protein Thivi_0436 IPR008220 Homoserine/serine acetyltransferase MetX-like Thivi_0436 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 IPR029058 Alpha/Beta hydrolase fold Thivi_0437 IPR001233 tRNA-splicing ligase, RtcB Thivi_0437 IPR036025 tRNA-splicing ligase RtcB-like superfamily Thivi_0438 IPR017509 Putative peptide chain release factor H Thivi_0438 IPR000352 Peptide chain release factor class I Thivi_0439 IPR000014 PAS domain Thivi_0439 IPR013655 PAS fold-3 Thivi_0439 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0439 IPR035965 PAS domain superfamily Thivi_0439 IPR001610 PAC motif Thivi_0439 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0439 IPR003660 HAMP domain Thivi_0439 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0439 IPR013655 PAS fold-3 Thivi_0439 IPR003660 HAMP domain Thivi_0439 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0439 IPR035965 PAS domain superfamily Thivi_0439 IPR001610 PAC motif Thivi_0439 IPR000014 PAS domain Thivi_0440 IPR031168 TrmE-type guanine nucleotide-binding domain Thivi_0440 IPR018948 GTP-binding protein TrmE, N-terminal Thivi_0440 IPR027368 tRNA modification GTPase MnmE domain 2 Thivi_0440 IPR004520 tRNA modification GTPase MnmE Thivi_0440 IPR025867 MnmE, helical domain Thivi_0440 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0440 IPR005225 Small GTP-binding protein domain Thivi_0440 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Thivi_0440 IPR006073 GTP binding domain Thivi_0441 IPR016496 GTPase HflX Thivi_0441 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0441 IPR042108 GTPase HflX, N-terminal domain superfamily Thivi_0441 IPR025121 GTPase HflX, N-terminal Thivi_0441 IPR032305 GTP-binding protein, middle domain Thivi_0441 IPR006073 GTP binding domain Thivi_0441 IPR030394 HflX-type guanine nucleotide-binding (G) domain Thivi_0442 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Thivi_0442 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Thivi_0442 IPR012338 Beta-lactamase/transpeptidase-like Thivi_0443 IPR005744 Hly-III Thivi_0443 IPR004254 AdipoR/Haemolysin-III-related Thivi_0444 IPR007236 SlyX Thivi_0447 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0447 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0447 IPR002481 Ferric-uptake regulator Thivi_0450 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_0450 IPR009248 SbmA/BacA-like Thivi_0456 IPR001650 Helicase, C-terminal Thivi_0456 IPR006483 CRISPR-associated Cas3-type HD domain Thivi_0456 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Thivi_0456 IPR011545 DEAD/DEAH box helicase domain Thivi_0456 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0456 IPR006474 Helicase Cas3, CRISPR-associated, core Thivi_0456 IPR035011 CRISPR-associated endonuclease/helicase Cas3 Thivi_0456 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0457 IPR013381 CRISPR-associated protein Cse1 Thivi_0459 IPR010148 CRISPR-associated protein, CT1975 Thivi_0460 IPR013422 CRISPR-associated protein Cas5, N-terminal Thivi_0460 IPR010147 CRISPR-associated protein, CasD Thivi_0460 IPR021124 CRISPR-associated protein, Cas5 Thivi_0461 IPR010179 CRISPR-associated protein Cse3 Thivi_0465 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain Thivi_0465 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype Thivi_0465 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain Thivi_0465 IPR033641 CRISPR-associated protein Cas1, type I-E Thivi_0465 IPR002729 CRISPR-associated protein Cas1 Thivi_0466 IPR010152 CRISPR-associated protein Cas2 subtype Thivi_0467 IPR029052 Metallo-dependent phosphatase-like Thivi_0467 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Thivi_0467 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_0468 IPR023065 Uncharacterised protein family ApaG Thivi_0468 IPR007474 ApaG domain Thivi_0468 IPR036767 ApaG domain superfamily Thivi_0470 IPR000683 Oxidoreductase, N-terminal Thivi_0470 IPR036291 NAD(P)-binding domain superfamily Thivi_0470 IPR004104 Oxidoreductase, C-terminal Thivi_0472 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0475 IPR036510 Ribosomal protein S20 superfamily Thivi_0475 IPR002583 Ribosomal protein S20 Thivi_0476 IPR017871 ABC transporter, conserved site Thivi_0476 IPR003439 ABC transporter-like Thivi_0476 IPR003593 AAA+ ATPase domain Thivi_0476 IPR000644 CBS domain Thivi_0476 IPR005892 Glycine betaine transport ATP-binding subunit Thivi_0476 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0477 IPR035906 MetI-like superfamily Thivi_0477 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_0479 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt Thivi_0481 IPR030048 Survival protein SurE Thivi_0481 IPR002828 Survival protein SurE-like phosphatase/nucleotidase Thivi_0481 IPR036523 SurE-like phosphatase/nucleotidase superfamily Thivi_0482 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0482 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Thivi_0483 IPR016047 Peptidase M23 Thivi_0483 IPR036779 LysM domain superfamily Thivi_0483 IPR018392 LysM domain Thivi_0483 IPR011055 Duplicated hybrid motif Thivi_0484 IPR012761 RNA polymerase sigma factor RpoS Thivi_0484 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0484 IPR013325 RNA polymerase sigma factor, region 2 Thivi_0484 IPR009042 RNA polymerase sigma-70 region 1.2 Thivi_0484 IPR007630 RNA polymerase sigma-70 region 4 Thivi_0484 IPR007624 RNA polymerase sigma-70 region 3 Thivi_0484 IPR007627 RNA polymerase sigma-70 region 2 Thivi_0484 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0484 IPR000943 RNA polymerase sigma-70 Thivi_0484 IPR014284 RNA polymerase sigma-70 like domain Thivi_0485 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_0485 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal Thivi_0485 IPR016454 Cysteine desulfurase Thivi_0485 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0485 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_0485 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_0485 IPR000192 Aminotransferase class V domain Thivi_0486 IPR034904 Fe-S cluster assembly domain superfamily Thivi_0486 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal Thivi_0486 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal Thivi_0486 IPR010238 NIF system FeS cluster assembly, NifU Thivi_0486 IPR016217 Nitrogen fixation, NifU Thivi_0486 IPR007419 BFD-like [2Fe-2S]-binding domain Thivi_0486 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily Thivi_0488 IPR036291 NAD(P)-binding domain superfamily Thivi_0488 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_0488 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0490 IPR008722 Outer membrane porin F, N-terminal Thivi_0490 IPR036737 OmpA-like domain superfamily Thivi_0490 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Thivi_0490 IPR006664 Outer membrane protein, bacterial Thivi_0490 IPR006665 OmpA-like domain Thivi_0490 IPR006690 Outer membrane protein, OmpA-like, conserved site Thivi_0491 IPR000890 Aliphatic acid kinase, short-chain Thivi_0491 IPR023865 Aliphatic acid kinase, short-chain, conserved site Thivi_0491 IPR004372 Acetate/propionate kinase Thivi_0492 IPR042112 Phosphate acetyltransferase, domain 2 Thivi_0492 IPR016475 Phosphate acetyltransferase, bacteria Thivi_0492 IPR010766 DRTGG Thivi_0492 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0492 IPR042113 Phosphate acetyltransferase, domain 1 Thivi_0492 IPR002505 Phosphate acetyl/butaryl transferase Thivi_0492 IPR004614 Phosphate acetyltransferase Thivi_0492 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_0494 IPR005663 Monovalent cation proton antiporter subunit A Thivi_0494 IPR025383 Domain of unknown function DUF4040 Thivi_0494 IPR005281 Monovalent cation:proton antiporter, subunit B Thivi_0494 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Thivi_0494 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thivi_0494 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_0495 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Thivi_0495 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thivi_0496 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thivi_0496 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_0497 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Thivi_0497 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thivi_0497 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site Thivi_0497 IPR010218 NADH dehydrogenase, subunit C Thivi_0498 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_0498 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_0498 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thivi_0498 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Thivi_0498 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thivi_0498 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Thivi_0498 IPR001135 NADH-quinone oxidoreductase, subunit D Thivi_0500 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA Thivi_0500 IPR029052 Metallo-dependent phosphatase-like Thivi_0500 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_0501 IPR003251 Rubrerythrin Thivi_0501 IPR009078 Ferritin-like superfamily Thivi_0501 IPR024934 Rubredoxin-like domain Thivi_0501 IPR012347 Ferritin-like Thivi_0501 IPR009040 Ferritin-like diiron domain Thivi_0503 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily Thivi_0503 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Thivi_0503 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Thivi_0504 IPR011760 Pseudouridine synthase, TruD, insertion domain Thivi_0504 IPR042214 Pseudouridine synthase, TruD, catalytic domain Thivi_0504 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_0504 IPR001656 Pseudouridine synthase, TruD Thivi_0504 IPR020119 Pseudouridine synthase TruD, conserved site Thivi_0510 IPR019614 S-adenosylmethionine-dependent methyltransferase Thivi_0510 IPR015947 PUA-like superfamily Thivi_0510 IPR036974 PUA domain superfamily Thivi_0510 IPR023542 rRNA large subunit methyltransferase I Thivi_0510 IPR041532 RlmI, PUA-like domain Thivi_0510 IPR002478 PUA domain Thivi_0510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0512 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0512 IPR003593 AAA+ ATPase domain Thivi_0512 IPR003439 ABC transporter-like Thivi_0512 IPR017871 ABC transporter, conserved site Thivi_0512 IPR041102 UvrA, interaction domain Thivi_0512 IPR041552 UvrA DNA-binding domain Thivi_0512 IPR004602 UvrABC system subunit A Thivi_0515 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Thivi_0515 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_0515 IPR029028 Alpha/beta knot methyltransferases Thivi_0515 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thivi_0515 IPR029064 50S ribosomal protein L30e-like Thivi_0515 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Thivi_0515 IPR004441 RNA methyltransferase TrmH family Thivi_0516 IPR011129 Cold shock domain Thivi_0516 IPR003029 S1 domain Thivi_0516 IPR022967 RNA-binding domain, S1 Thivi_0516 IPR013668 Ribonuclease R winged-helix domain Thivi_0516 IPR040476 RNase II/RNase R, cold shock domain Thivi_0516 IPR013223 Ribonuclease B, N-terminal OB domain Thivi_0516 IPR001900 Ribonuclease II/R Thivi_0516 IPR012340 Nucleic acid-binding, OB-fold Thivi_0516 IPR004476 Ribonuclease II/ribonuclease R Thivi_0516 IPR011805 Ribonuclease R Thivi_0516 IPR022966 Ribonuclease II/R, conserved site Thivi_0518 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal Thivi_0518 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0518 IPR023506 Trans-aconitate 2-methyltransferase Thivi_0520 IPR017629 4-hydroxy-2-oxovalerate aldolase Thivi_0520 IPR000891 Pyruvate carboxyltransferase Thivi_0520 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain Thivi_0520 IPR012425 DmpG-like communication Thivi_0520 IPR013785 Aldolase-type TIM barrel Thivi_0521 IPR016142 Citrate synthase-like, large alpha subdomain Thivi_0521 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_0521 IPR002020 Citrate synthase Thivi_0521 IPR019810 Citrate synthase active site Thivi_0521 IPR024176 Citrate synthase, bacterial-type Thivi_0521 IPR036969 Citrate synthase superfamily Thivi_0521 IPR010953 Citrate synthase, type I Thivi_0526 IPR036291 NAD(P)-binding domain superfamily Thivi_0526 IPR001509 NAD-dependent epimerase/dehydratase Thivi_0527 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0527 IPR011917 ABC transporter, lipid A export, MsbA Thivi_0527 IPR017871 ABC transporter, conserved site Thivi_0527 IPR003439 ABC transporter-like Thivi_0527 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_0527 IPR011527 ABC transporter type 1, transmembrane domain Thivi_0527 IPR003593 AAA+ ATPase domain Thivi_0528 IPR028366 Phosphate transport system protein PhoU Thivi_0528 IPR038078 PhoU-like domain superfamily Thivi_0528 IPR026022 PhoU domain Thivi_0529 IPR013767 PAS fold Thivi_0529 IPR001610 PAC motif Thivi_0529 IPR000700 PAS-associated, C-terminal Thivi_0529 IPR035965 PAS domain superfamily Thivi_0529 IPR001633 EAL domain Thivi_0529 IPR035919 EAL domain superfamily Thivi_0529 IPR003018 GAF domain Thivi_0529 IPR029016 GAF-like domain superfamily Thivi_0529 IPR000160 GGDEF domain Thivi_0529 IPR000014 PAS domain Thivi_0529 IPR029787 Nucleotide cyclase Thivi_0530 IPR004090 Chemotaxis methyl-accepting receptor Thivi_0530 IPR003660 HAMP domain Thivi_0530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0530 IPR033480 Single Cache domain 2 Thivi_0533 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_0533 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 IPR036291 NAD(P)-binding domain superfamily Thivi_0533 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Thivi_0534 IPR019734 Tetratricopeptide repeat Thivi_0534 IPR030865 Lipopolysaccharide assembly protein B Thivi_0534 IPR041166 LapB, rubredoxin metal binding domain Thivi_0534 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_0534 IPR013026 Tetratricopeptide repeat-containing domain Thivi_0536 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0536 IPR005835 Nucleotidyl transferase domain Thivi_0536 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Thivi_0538 IPR022742 Serine aminopeptidase, S33 Thivi_0538 IPR012354 Esterase/lipase Thivi_0538 IPR029058 Alpha/Beta hydrolase fold Thivi_0539 IPR025526 DsrC-like domain superfamily Thivi_0539 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0539 IPR042072 DsrC-like protein, C-terminal domain Thivi_0544 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Thivi_0544 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Thivi_0544 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit Thivi_0544 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Thivi_0545 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Thivi_0545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0545 IPR011808 Sulphite reductase, dissimilatory-type beta subunit Thivi_0545 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Thivi_0545 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Thivi_0546 IPR027396 DsrEFH-like Thivi_0546 IPR003787 Sulphur relay, DsrE/F-like protein Thivi_0546 IPR017463 Sulphur relay, TusD/DsrE Thivi_0547 IPR027396 DsrEFH-like Thivi_0547 IPR017462 Sulphur relay, TusC/DsrF Thivi_0547 IPR003787 Sulphur relay, DsrE/F-like protein Thivi_0549 IPR025526 DsrC-like domain superfamily Thivi_0549 IPR042072 DsrC-like protein, C-terminal domain Thivi_0549 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0552 IPR028261 Dihydroprymidine dehydrogenase domain II Thivi_0552 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Thivi_0552 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0552 IPR009051 Alpha-helical ferredoxin Thivi_0552 IPR023753 FAD/NAD(P)-binding domain Thivi_0554 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0554 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0554 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_0556 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0556 IPR029062 Class I glutamine amidotransferase-like Thivi_0556 IPR017929 CobB/CobQ glutamine amidotransferase Thivi_0556 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Thivi_0556 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0556 IPR011698 CobB/CobQ-like glutamine amidotransferase Thivi_0558 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_0558 IPR006654 Tryptophan synthase, beta chain Thivi_0558 IPR006653 Tryptophan synthase, beta chain, conserved site Thivi_0558 IPR006316 Tryptophan synthase, beta chain-like Thivi_0558 IPR023026 Tryptophan synthase beta chain/beta chain-like Thivi_0558 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0559 IPR033479 Double Cache domain 1 Thivi_0559 IPR003660 HAMP domain Thivi_0559 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_0559 IPR000727 Target SNARE coiled-coil homology domain Thivi_0559 IPR029151 Periplasmic sensor-like domain superfamily Thivi_0560 IPR011006 CheY-like superfamily Thivi_0560 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0560 IPR001789 Signal transduction response regulator, receiver domain Thivi_0560 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0560 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0561 IPR001633 EAL domain Thivi_0561 IPR035919 EAL domain superfamily Thivi_0561 IPR000160 GGDEF domain Thivi_0561 IPR005330 MHYT domain Thivi_0561 IPR029787 Nucleotide cyclase Thivi_0562 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0562 IPR011006 CheY-like superfamily Thivi_0562 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0562 IPR001789 Signal transduction response regulator, receiver domain Thivi_0562 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0562 IPR005467 Histidine kinase domain Thivi_0562 IPR013656 PAS fold-4 Thivi_0562 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0562 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0562 IPR000014 PAS domain Thivi_0562 IPR035965 PAS domain superfamily Thivi_0563 IPR001789 Signal transduction response regulator, receiver domain Thivi_0563 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0563 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0563 IPR003660 HAMP domain Thivi_0563 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0563 IPR036641 HPT domain superfamily Thivi_0563 IPR019247 Histidine kinase BarA, N-terminal Thivi_0563 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0563 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0563 IPR005467 Histidine kinase domain Thivi_0563 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0563 IPR011006 CheY-like superfamily Thivi_0565 IPR017754 Agmatine deiminase Thivi_0565 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type Thivi_0568 IPR006214 Bax inhibitor 1-related Thivi_0576 IPR025865 Cobaltochelatase subunit CobS N-terminal domain Thivi_0576 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0576 IPR011704 ATPase, dynein-related, AAA domain Thivi_0576 IPR006537 Cobaltochelatase subunit CobS Thivi_0576 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_0585 IPR037219 Peptidase M41-like Thivi_0585 IPR041569 AAA ATPase, AAA+ lid domain Thivi_0585 IPR000642 Peptidase M41 Thivi_0585 IPR003593 AAA+ ATPase domain Thivi_0585 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0585 IPR003959 ATPase, AAA-type, core Thivi_0585 IPR005936 Peptidase, FtsH Thivi_0585 IPR003960 ATPase, AAA-type, conserved site Thivi_0587 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0587 IPR003356 DNA methylase, adenine-specific Thivi_0587 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_0590 IPR000055 Restriction endonuclease, type I, HsdS Thivi_0591 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0591 IPR021810 Protein of unknown function DUF3387 Thivi_0591 IPR040980 SWI2/SNF2 ATPase Thivi_0591 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0591 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Thivi_0591 IPR004473 Restriction endonuclease, type I, HsdR Thivi_0595 IPR002559 Transposase, IS4-like Thivi_0595 IPR032806 H repeat-associated protein, N-terminal Thivi_0596 IPR013762 Integrase-like, catalytic domain superfamily Thivi_0596 IPR038488 Integrase, DNA-binding domain superfamily Thivi_0596 IPR004107 Integrase, SAM-like, N-terminal Thivi_0596 IPR010998 Integrase/recombinase, N-terminal Thivi_0596 IPR025166 Integrase, DNA-binding domain Thivi_0596 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_0596 IPR002104 Integrase, catalytic domain Thivi_0598 IPR023801 Histone deacetylase domain Thivi_0598 IPR000286 Histone deacetylase family Thivi_0598 IPR023696 Ureohydrolase domain superfamily Thivi_0598 IPR037138 Histone deacetylase domain superfamily Thivi_0599 IPR036291 NAD(P)-binding domain superfamily Thivi_0599 IPR016181 Acyl-CoA N-acyltransferase Thivi_0599 IPR011761 ATP-grasp fold Thivi_0599 IPR013815 ATP-grasp fold, subdomain 1 Thivi_0599 IPR003781 CoA-binding Thivi_0599 IPR000182 GNAT domain Thivi_0599 IPR016102 Succinyl-CoA synthetase-like Thivi_0599 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Thivi_0600 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Thivi_0600 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thivi_0600 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Thivi_0600 IPR005288 L-aspartate oxidase Thivi_0600 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0600 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Thivi_0601 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0601 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0601 IPR014284 RNA polymerase sigma-70 like domain Thivi_0601 IPR013325 RNA polymerase sigma factor, region 2 Thivi_0601 IPR039425 RNA polymerase sigma-70 like Thivi_0601 IPR007627 RNA polymerase sigma-70 region 2 Thivi_0601 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Thivi_0601 IPR014286 RNA polymerase sigma-70 RpoE type Thivi_0601 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Thivi_0603 IPR033436 MucB/RseB, C-terminal Thivi_0603 IPR005588 MucB/RseB Thivi_0603 IPR038484 MucB/RseB, C-terminal domain superfamily Thivi_0603 IPR033434 MucB/RseB, N-terminal Thivi_0605 IPR001940 Peptidase S1C Thivi_0605 IPR009003 Peptidase S1, PA clan Thivi_0605 IPR036034 PDZ superfamily Thivi_0605 IPR041489 PDZ domain 6 Thivi_0605 IPR001478 PDZ domain Thivi_0605 IPR011782 Peptidase S1C, Do Thivi_0606 IPR013842 GTP-binding protein LepA, C-terminal Thivi_0606 IPR035647 EF-G domain III/V-like Thivi_0606 IPR006297 Elongation factor 4 Thivi_0606 IPR038363 LepA, C-terminal domain superfamily Thivi_0606 IPR031157 Tr-type G domain, conserved site Thivi_0606 IPR000640 Elongation factor EFG, domain V-like Thivi_0606 IPR035654 Elongation factor 4, domain IV Thivi_0606 IPR000795 Transcription factor, GTP-binding domain Thivi_0606 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0606 IPR005225 Small GTP-binding protein domain Thivi_0607 IPR036286 LexA/Signal peptidase-like superfamily Thivi_0607 IPR000223 Peptidase S26A, signal peptidase I Thivi_0607 IPR019758 Peptidase S26A, signal peptidase I, conserved site Thivi_0607 IPR019756 Peptidase S26A, signal peptidase I, serine active site Thivi_0607 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Thivi_0607 IPR019533 Peptidase S26 Thivi_0609 IPR011907 Ribonuclease III Thivi_0609 IPR000999 Ribonuclease III domain Thivi_0609 IPR014720 Double-stranded RNA-binding domain Thivi_0609 IPR036389 Ribonuclease III, endonuclease domain superfamily Thivi_0610 IPR006073 GTP binding domain Thivi_0610 IPR005225 Small GTP-binding protein domain Thivi_0610 IPR030388 Era-type guanine nucleotide-binding (G) domain Thivi_0610 IPR005662 GTP-binding protein Era Thivi_0610 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0610 IPR009019 K homology domain superfamily, prokaryotic type Thivi_0610 IPR015946 K homology domain-like, alpha/beta Thivi_0610 IPR004044 K Homology domain, type 2 Thivi_0611 IPR022572 DNA replication/recombination mediator RecO, N-terminal Thivi_0611 IPR003717 Recombination protein O, RecO Thivi_0611 IPR012340 Nucleic acid-binding, OB-fold Thivi_0611 IPR037278 ARFGAP/RecO-like zinc finger Thivi_0612 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ Thivi_0612 IPR036130 Pyridoxine 5'-phosphate synthase Thivi_0612 IPR013785 Aldolase-type TIM barrel Thivi_0614 IPR000209 Peptidase S8/S53 domain Thivi_0614 IPR022398 Peptidase S8, subtilisin, His-active site Thivi_0614 IPR023828 Peptidase S8, subtilisin, Ser-active site Thivi_0614 IPR015500 Peptidase S8, subtilisin-related Thivi_0614 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Thivi_0614 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Thivi_0614 IPR034202 Subtilisin Carlsberg-like catalytic domain Thivi_0614 IPR036852 Peptidase S8/S53 domain superfamily Thivi_0614 IPR023827 Peptidase S8, subtilisin, Asp-active site Thivi_0615 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_0615 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Thivi_0615 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_0615 IPR006656 Molybdopterin oxidoreductase Thivi_0615 IPR006657 Molybdopterin dinucleotide-binding domain Thivi_0615 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_0615 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE Thivi_0617 IPR035920 YhbY-like superfamily Thivi_0617 IPR017924 RNA-binding protein YhbY Thivi_0617 IPR001890 RNA-binding, CRM domain Thivi_0618 IPR016066 Alpha-D-phosphohexomutase, conserved site Thivi_0618 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thivi_0618 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thivi_0618 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thivi_0618 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Thivi_0618 IPR005841 Alpha-D-phosphohexomutase superfamily Thivi_0618 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thivi_0618 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thivi_0619 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 IPR001404 Heat shock protein Hsp90 family Thivi_0619 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0619 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0619 IPR019805 Heat shock protein Hsp90, conserved site Thivi_0619 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_0619 IPR037196 HSP90, C-terminal domain Thivi_0620 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0620 IPR033690 Adenylate kinase, conserved site Thivi_0620 IPR000850 Adenylate kinase/UMP-CMP kinase Thivi_0620 IPR006259 Adenylate kinase subfamily Thivi_0620 IPR007862 Adenylate kinase, active site lid domain Thivi_0621 IPR013766 Thioredoxin domain Thivi_0621 IPR005746 Thioredoxin Thivi_0621 IPR036249 Thioredoxin-like superfamily Thivi_0621 IPR017937 Thioredoxin, conserved site Thivi_0623 IPR000944 Transcription regulator Rrf2-type Thivi_0623 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0623 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0623 IPR030489 Transcription regulator Rrf2-type, conserved site Thivi_0623 IPR010242 Transcription factor HTH, IscR Thivi_0624 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0624 IPR007848 Methyltransferase small domain Thivi_0624 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase Thivi_0624 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_0624 IPR004556 Methyltransferase HemK-like Thivi_0626 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_0626 IPR034505 Anaerobic coproporphyrinogen-III oxidase Thivi_0626 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN Thivi_0626 IPR010723 HemN, C-terminal Thivi_0626 IPR006638 Elp3/MiaB/NifB Thivi_0626 IPR007197 Radical SAM Thivi_0627 IPR008880 Trigger factor, C-terminal Thivi_0627 IPR005215 Trigger factor Thivi_0627 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_0627 IPR008881 Trigger factor, ribosome-binding, bacterial Thivi_0627 IPR036611 Trigger factor ribosome-binding domain superfamily Thivi_0627 IPR027304 Trigger factor/SurA domain superfamily Thivi_0627 IPR037041 Trigger factor, C-terminal domain superfamily Thivi_0628 IPR001907 ATP-dependent Clp protease proteolytic subunit Thivi_0628 IPR029045 ClpP/crotonase-like domain superfamily Thivi_0628 IPR033135 ClpP, histidine active site Thivi_0628 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Thivi_0628 IPR018215 ClpP, Ser active site Thivi_0629 IPR010603 Zinc finger, ClpX C4-type Thivi_0629 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0629 IPR038366 Zinc finger, ClpX C4-type superfamily Thivi_0629 IPR004487 Clp protease, ATP-binding subunit ClpX Thivi_0629 IPR003593 AAA+ ATPase domain Thivi_0629 IPR019489 Clp ATPase, C-terminal Thivi_0629 IPR003959 ATPase, AAA-type, core Thivi_0630 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_0630 IPR027065 Lon protease Thivi_0630 IPR003593 AAA+ ATPase domain Thivi_0630 IPR003959 ATPase, AAA-type, core Thivi_0630 IPR004815 Lon protease, bacterial/eukaryotic-type Thivi_0630 IPR008269 Peptidase S16, Lon proteolytic domain Thivi_0630 IPR015947 PUA-like superfamily Thivi_0630 IPR027543 Lon protease, bacterial Thivi_0630 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_0630 IPR003111 Lon, substrate-binding domain Thivi_0630 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0631 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Thivi_0631 IPR000119 Histone-like DNA-binding protein Thivi_0631 IPR020816 Histone-like DNA-binding protein, conserved site Thivi_0634 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thivi_0634 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thivi_0634 IPR027304 Trigger factor/SurA domain superfamily Thivi_0635 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site Thivi_0635 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0635 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal Thivi_0635 IPR012255 Electron transfer flavoprotein, beta subunit Thivi_0635 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Thivi_0636 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Thivi_0636 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0636 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_0636 IPR001308 Electron transfer flavoprotein alpha subunit/FixB Thivi_0636 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal Thivi_0636 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Thivi_0636 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Thivi_0637 IPR006089 Acyl-CoA dehydrogenase, conserved site Thivi_0637 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Thivi_0637 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Thivi_0637 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal Thivi_0637 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Thivi_0637 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily Thivi_0637 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily Thivi_0638 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0638 IPR002035 von Willebrand factor, type A Thivi_0638 IPR022933 Uncharacterised protein family UPF0353 Thivi_0638 IPR024163 Aerotolerance regulator, N-terminal Thivi_0640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_0640 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0640 IPR022278 Phosphoserine aminotransferase Thivi_0640 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_0640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_0640 IPR000192 Aminotransferase class V domain Thivi_0642 IPR000160 GGDEF domain Thivi_0642 IPR029787 Nucleotide cyclase Thivi_0642 IPR013656 PAS fold-4 Thivi_0642 IPR000014 PAS domain Thivi_0642 IPR035965 PAS domain superfamily Thivi_0642 IPR000700 PAS-associated, C-terminal Thivi_0644 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0644 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0644 IPR003660 HAMP domain Thivi_0644 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0644 IPR001789 Signal transduction response regulator, receiver domain Thivi_0644 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0644 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0644 IPR036641 HPT domain superfamily Thivi_0644 IPR019247 Histidine kinase BarA, N-terminal Thivi_0644 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0644 IPR011006 CheY-like superfamily Thivi_0644 IPR005467 Histidine kinase domain Thivi_0645 IPR023703 Membrane-bound lytic murein transglycosylase F Thivi_0645 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0645 IPR008258 Transglycosylase SLT domain 1 Thivi_0645 IPR000189 Prokaryotic transglycosylase, active site Thivi_0645 IPR023346 Lysozyme-like domain superfamily Thivi_0646 IPR001789 Signal transduction response regulator, receiver domain Thivi_0646 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0646 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0646 IPR011006 CheY-like superfamily Thivi_0646 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0646 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Thivi_0647 IPR001789 Signal transduction response regulator, receiver domain Thivi_0647 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0647 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0647 IPR005467 Histidine kinase domain Thivi_0647 IPR003660 HAMP domain Thivi_0647 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0647 IPR019247 Histidine kinase BarA, N-terminal Thivi_0647 IPR036641 HPT domain superfamily Thivi_0647 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0647 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0647 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0647 IPR011006 CheY-like superfamily Thivi_0648 IPR001633 EAL domain Thivi_0648 IPR035919 EAL domain superfamily Thivi_0648 IPR029787 Nucleotide cyclase Thivi_0648 IPR005330 MHYT domain Thivi_0648 IPR000160 GGDEF domain Thivi_0650 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Thivi_0650 IPR013976 Metal-dependent hydrolase HDOD Thivi_0650 IPR001633 EAL domain Thivi_0650 IPR035919 EAL domain superfamily Thivi_0653 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0653 IPR025302 Domain of unknown function DUF4162 Thivi_0653 IPR017871 ABC transporter, conserved site Thivi_0653 IPR003439 ABC transporter-like Thivi_0653 IPR003593 AAA+ ATPase domain Thivi_0655 IPR003825 Colicin V production, CvpA Thivi_0656 IPR035584 Amidophosphoribosyltransferase, N-terminal Thivi_0656 IPR005854 Amidophosphoribosyltransferase Thivi_0656 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_0656 IPR000836 Phosphoribosyltransferase domain Thivi_0656 IPR017932 Glutamine amidotransferase type 2 domain Thivi_0656 IPR029057 Phosphoribosyltransferase-like Thivi_0657 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_0657 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0657 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_0657 IPR006234 O-succinylhomoserine sulfhydrylase Thivi_0657 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Thivi_0660 IPR011032 GroES-like superfamily Thivi_0660 IPR020818 GroES chaperonin family Thivi_0660 IPR037124 GroES chaperonin superfamily Thivi_0660 IPR018369 Chaperonin GroES, conserved site Thivi_0661 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0661 IPR018370 Chaperonin Cpn60, conserved site Thivi_0661 IPR001844 Chaperonin Cpn60 Thivi_0661 IPR027413 GroEL-like equatorial domain superfamily Thivi_0661 IPR002423 Chaperonin Cpn60/TCP-1 family Thivi_0661 IPR027409 GroEL-like apical domain superfamily Thivi_0663 IPR008978 HSP20-like chaperone Thivi_0663 IPR002068 Alpha crystallin/Hsp20 domain Thivi_0664 IPR008978 HSP20-like chaperone Thivi_0664 IPR002068 Alpha crystallin/Hsp20 domain Thivi_0668 IPR000212 DNA helicase, UvrD/REP type Thivi_0668 IPR014017 UvrD-like DNA helicase, C-terminal Thivi_0668 IPR013986 DExx box DNA helicase domain superfamily Thivi_0668 IPR005752 ATP-dependent DNA helicase Rep Thivi_0668 IPR034739 UvrD/AddA helicase, N-terminal Thivi_0668 IPR014016 UvrD-like helicase, ATP-binding domain Thivi_0668 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0669 IPR026564 Transcriptional regulator TACO1-like, domain 3 Thivi_0669 IPR002876 Transcriptional regulator TACO1-like Thivi_0669 IPR029072 YebC-like Thivi_0669 IPR017856 Integrase-like, N-terminal Thivi_0671 IPR036397 Ribonuclease H superfamily Thivi_0671 IPR012337 Ribonuclease H-like superfamily Thivi_0671 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Thivi_0671 IPR002176 Crossover junction endodeoxyribonuclease RuvC Thivi_0672 IPR000085 Bacterial DNA recombination protein RuvA Thivi_0672 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thivi_0672 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Thivi_0672 IPR010994 RuvA domain 2-like Thivi_0672 IPR011114 Holliday junction DNA helicase RuvA, C-terminal Thivi_0672 IPR012340 Nucleic acid-binding, OB-fold Thivi_0672 IPR036267 RuvA, C-terminal domain superfamily Thivi_0673 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0673 IPR001789 Signal transduction response regulator, receiver domain Thivi_0673 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0673 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0673 IPR036641 HPT domain superfamily Thivi_0673 IPR019247 Histidine kinase BarA, N-terminal Thivi_0673 IPR005467 Histidine kinase domain Thivi_0673 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0673 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0673 IPR003660 HAMP domain Thivi_0673 IPR011006 CheY-like superfamily Thivi_0673 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0674 IPR006094 FAD linked oxidase, N-terminal Thivi_0674 IPR016166 FAD-binding domain, PCMH-type Thivi_0674 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_0674 IPR016164 FAD-linked oxidase-like, C-terminal Thivi_0674 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_0675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0675 IPR009051 Alpha-helical ferredoxin Thivi_0675 IPR012257 Glycolate oxidase, iron-sulphur subunit Thivi_0675 IPR004017 Cysteine-rich domain Thivi_0675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0676 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Thivi_0676 IPR006398 2-hydroxy-3-oxopropionate reductase Thivi_0676 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Thivi_0676 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_0676 IPR036291 NAD(P)-binding domain superfamily Thivi_0676 IPR015815 3-hydroxyisobutyrate dehydrogenase-related Thivi_0676 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Thivi_0676 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thivi_0678 IPR008302 Uncharacterised conserved protein UCP016719 Thivi_0679 IPR042119 QueA, domain 2 Thivi_0679 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily Thivi_0679 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Thivi_0679 IPR042118 QueA, domain 1 Thivi_0681 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_0681 IPR001650 Helicase, C-terminal Thivi_0681 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0681 IPR011545 DEAD/DEAH box helicase domain Thivi_0681 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0681 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_0681 IPR028622 ATP-dependent RNA helicase RhlE Thivi_0682 IPR035979 RNA-binding domain superfamily Thivi_0682 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_0682 IPR000504 RNA recognition motif domain Thivi_0684 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Thivi_0684 IPR004409 Biotin operon repressor, helix-turn-helix domain Thivi_0684 IPR008988 Transcriptional repressor, C-terminal Thivi_0684 IPR003142 Biotin protein ligase, C-terminal Thivi_0684 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Thivi_0684 IPR030855 Bifunctional ligase/repressor BirA Thivi_0686 IPR004619 Type III pantothenate kinase Thivi_0689 IPR011005 Dihydropteroate synthase-like Thivi_0689 IPR006390 Dihydropteroate synthase Thivi_0689 IPR000489 Pterin-binding domain Thivi_0690 IPR001264 Glycosyl transferase, family 51 Thivi_0690 IPR011812 Biosynthetic peptidoglycan transglycosylase Thivi_0690 IPR036950 Penicillin binding protein transglycosylase domain Thivi_0690 IPR023346 Lysozyme-like domain superfamily Thivi_0691 IPR001460 Penicillin-binding protein, transpeptidase Thivi_0691 IPR031376 Penicillin-binding protein, OB-like domain Thivi_0691 IPR036950 Penicillin binding protein transglycosylase domain Thivi_0691 IPR023346 Lysozyme-like domain superfamily Thivi_0691 IPR012338 Beta-lactamase/transpeptidase-like Thivi_0691 IPR001264 Glycosyl transferase, family 51 Thivi_0693 IPR005467 Histidine kinase domain Thivi_0693 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0693 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0693 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0693 IPR003660 HAMP domain Thivi_0693 IPR001789 Signal transduction response regulator, receiver domain Thivi_0693 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0693 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0693 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0693 IPR036641 HPT domain superfamily Thivi_0693 IPR011006 CheY-like superfamily Thivi_0693 IPR019247 Histidine kinase BarA, N-terminal Thivi_0694 IPR000160 GGDEF domain Thivi_0694 IPR029787 Nucleotide cyclase Thivi_0694 IPR033416 Periplasmic sensor domain CHASE7 Thivi_0695 IPR035919 EAL domain superfamily Thivi_0695 IPR001633 EAL domain Thivi_0695 IPR000160 GGDEF domain Thivi_0695 IPR005330 MHYT domain Thivi_0695 IPR029787 Nucleotide cyclase Thivi_0696 IPR003846 Protein adenylyltransferase SelO Thivi_0697 IPR008526 Inner membrane protein YedI Thivi_0701 IPR005134 Uncharacterised protein family UPF0114 Thivi_0701 IPR020761 Uncharacterised protein family UPF0114, bacteria Thivi_0702 IPR035919 EAL domain superfamily Thivi_0702 IPR003018 GAF domain Thivi_0702 IPR029016 GAF-like domain superfamily Thivi_0702 IPR000160 GGDEF domain Thivi_0702 IPR029787 Nucleotide cyclase Thivi_0702 IPR001633 EAL domain Thivi_0702 IPR016132 Phytochrome chromophore attachment domain Thivi_0702 IPR013515 Phytochrome, central region Thivi_0702 IPR001294 Phytochrome Thivi_0705 IPR004734 Multidrug resistance protein Thivi_0705 IPR020846 Major facilitator superfamily domain Thivi_0705 IPR011701 Major facilitator superfamily Thivi_0705 IPR004812 Drug resistance transporter Bcr/CmlA subfamily Thivi_0705 IPR036259 MFS transporter superfamily Thivi_0706 IPR011006 CheY-like superfamily Thivi_0706 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0706 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0706 IPR005467 Histidine kinase domain Thivi_0706 IPR001789 Signal transduction response regulator, receiver domain Thivi_0706 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_0706 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0706 IPR036641 HPT domain superfamily Thivi_0706 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0706 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0707 IPR001036 Acriflavin resistance protein Thivi_0707 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0708 IPR022824 Multidrug resistance protein MdtA Thivi_0708 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_0708 IPR006143 RND efflux pump, membrane fusion protein Thivi_0709 IPR006242 Putative pyrophosphorylase ModD Thivi_0709 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Thivi_0709 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Thivi_0709 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Thivi_0709 IPR013785 Aldolase-type TIM barrel Thivi_0709 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Thivi_0709 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Thivi_0711 IPR011032 GroES-like superfamily Thivi_0711 IPR018369 Chaperonin GroES, conserved site Thivi_0711 IPR037124 GroES chaperonin superfamily Thivi_0711 IPR020818 GroES chaperonin family Thivi_0712 IPR002423 Chaperonin Cpn60/TCP-1 family Thivi_0712 IPR027409 GroEL-like apical domain superfamily Thivi_0712 IPR001844 Chaperonin Cpn60 Thivi_0712 IPR018370 Chaperonin Cpn60, conserved site Thivi_0712 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0712 IPR027413 GroEL-like equatorial domain superfamily Thivi_0713 IPR003477 mRNA interferase PemK-like Thivi_0713 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_0714 IPR037914 SpoVT-AbrB domain superfamily Thivi_0714 IPR007159 SpoVT-AbrB domain Thivi_0714 IPR039052 Antitoxin PemI-like Thivi_0715 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_0715 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_0715 IPR012910 TonB-dependent receptor, plug domain Thivi_0715 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_0715 IPR010101 TonB-dependent vitamin B12 transporter BtuB Thivi_0715 IPR039426 Vitamin B12 transporter BtuB-like Thivi_0717 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily Thivi_0717 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Thivi_0717 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Thivi_0717 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Thivi_0718 IPR003805 Adenosylcobinamide-GDP ribazoletransferase Thivi_0721 IPR001279 Metallo-beta-lactamase Thivi_0721 IPR025405 Domain of unknown function DUF4131 Thivi_0721 IPR004797 Competence protein ComEC/Rec2 Thivi_0721 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_0721 IPR004477 ComEC/Rec2-related protein Thivi_0721 IPR035681 ComA-like, MBL domain Thivi_0724 IPR017871 ABC transporter, conserved site Thivi_0724 IPR003593 AAA+ ATPase domain Thivi_0724 IPR003439 ABC transporter-like Thivi_0724 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0724 IPR015854 ABC transporter, lipoprotein release, LolD Thivi_0724 IPR011924 Lipoprotein releasing system, ATP-binding protein Thivi_0725 IPR003838 ABC transporter permease protein domain Thivi_0725 IPR025857 MacB-like periplasmic core domain Thivi_0725 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E Thivi_0726 IPR030922 LPS export ABC transporter permease LptF Thivi_0726 IPR005495 Permease LptG/LptF-related Thivi_0728 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase Thivi_0728 IPR012779 Peptidase M1, alanyl aminopeptidase Thivi_0728 IPR014782 Peptidase M1, membrane alanine aminopeptidase Thivi_0728 IPR042097 Aminopeptidase N-like , N-terminal Thivi_0728 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Thivi_0728 IPR027268 Peptidase M4/M1, CTD superfamily Thivi_0728 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Thivi_0728 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Thivi_0728 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Thivi_0729 IPR011767 Glutaredoxin active site Thivi_0729 IPR036249 Thioredoxin-like superfamily Thivi_0729 IPR011900 Glutaredoxin, GrxC Thivi_0729 IPR002109 Glutaredoxin Thivi_0729 IPR014025 Glutaredoxin subgroup Thivi_0730 IPR002942 RNA-binding S4 domain Thivi_0730 IPR036986 RNA-binding S4 domain superfamily Thivi_0730 IPR025708 Heat shock protein 15 Thivi_0735 IPR025105 Domain of unknown function DUF4010 Thivi_0737 IPR036038 Aminotransferase-like, PLP-dependent enzymes Thivi_0737 IPR005785 Branched-chain amino acid aminotransferase I Thivi_0737 IPR033939 Branched-chain aminotransferase Thivi_0737 IPR001544 Aminotransferase class IV Thivi_0737 IPR018300 Aminotransferase, class IV, conserved site Thivi_0738 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain Thivi_0738 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme Thivi_0738 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Thivi_0739 IPR011013 Galactose mutarotase-like domain superfamily Thivi_0739 IPR025532 Glucose-6-phosphate 1-epimerase Thivi_0739 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase Thivi_0739 IPR014718 Glycoside hydrolase-type carbohydrate-binding Thivi_0740 IPR008928 Six-hairpin glycosidase superfamily Thivi_0740 IPR037824 NdvB, GH94N domain 2 Thivi_0740 IPR012341 Six-hairpin glycosidase-like superfamily Thivi_0740 IPR019282 Domain of unknown function DUF2329 Thivi_0740 IPR011013 Galactose mutarotase-like domain superfamily Thivi_0740 IPR033432 Glycosyl hydrolase 36, catalytic domain Thivi_0740 IPR009342 Putative carbohydrate binding domain Thivi_0740 IPR037820 NdvB, GH94N domain 1 Thivi_0740 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_0740 IPR010383 Glycosyl hydrolase 94 Thivi_0742 IPR003751 Translational regulator CsrA Thivi_0742 IPR036107 Carbon storage regulator superfamily Thivi_0743 IPR002912 ACT domain Thivi_0743 IPR041740 Aspartokinase catalytic domain Thivi_0743 IPR001048 Aspartate/glutamate/uridylate kinase Thivi_0743 IPR018042 Aspartate kinase, conserved site Thivi_0743 IPR005260 Aspartate kinase, monofunctional class Thivi_0743 IPR001341 Aspartate kinase Thivi_0743 IPR036393 Acetylglutamate kinase-like superfamily Thivi_0743 IPR027795 CASTOR, ACT domain Thivi_0744 IPR002318 Alanine-tRNA ligase, class IIc Thivi_0744 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_0744 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily Thivi_0744 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain Thivi_0744 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Thivi_0744 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Thivi_0744 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Thivi_0744 IPR003156 DHHA1 domain Thivi_0744 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Thivi_0745 IPR003783 Regulatory protein RecX Thivi_0745 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0746 IPR023400 DNA recombination and repair protein RecA, C-terminal Thivi_0746 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Thivi_0746 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0746 IPR020584 DNA recombination/repair protein RecA, conserved site Thivi_0746 IPR013765 DNA recombination and repair protein RecA Thivi_0746 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface Thivi_0746 IPR003593 AAA+ ATPase domain Thivi_0747 IPR009097 Cyclic phosphodiesterase Thivi_0747 IPR004175 RNA 2',3'-cyclic phosphodiesterase Thivi_0748 IPR036653 CinA-like, C-terminal Thivi_0748 IPR008136 CinA, C-terminal Thivi_0749 IPR000719 Protein kinase domain Thivi_0749 IPR017441 Protein kinase, ATP binding site Thivi_0749 IPR008271 Serine/threonine-protein kinase, active site Thivi_0749 IPR023507 Serine/threonine protein kinase PknD Thivi_0749 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_0749 IPR011009 Protein kinase-like domain superfamily Thivi_0754 IPR010233 Ubiquinone biosynthesis O-methyltransferase Thivi_0754 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0755 IPR003342 Glycosyl transferase family 39/83 Thivi_0755 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase Thivi_0756 IPR001173 Glycosyltransferase 2-like Thivi_0756 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0757 IPR006839 Ribosome-associated, YjgA Thivi_0757 IPR023153 PSPTO4464-like domain superfamily Thivi_0758 IPR038763 DHH phosphoesterase superfamily Thivi_0758 IPR001667 DDH domain Thivi_0758 IPR041122 RecJ, OB domain Thivi_0758 IPR004610 Bacterial RecJ exonuclease Thivi_0758 IPR003156 DHHA1 domain Thivi_0759 IPR017911 ABC transporter, macrolide export, ATP-binding domain Thivi_0759 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0759 IPR003838 ABC transporter permease protein domain Thivi_0759 IPR003439 ABC transporter-like Thivi_0759 IPR017871 ABC transporter, conserved site Thivi_0759 IPR025857 MacB-like periplasmic core domain Thivi_0759 IPR003593 AAA+ ATPase domain Thivi_0760 IPR006143 RND efflux pump, membrane fusion protein Thivi_0760 IPR030190 Macrolide export protein MacA Thivi_0760 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_0762 IPR006222 Aminomethyltransferase, folate-binding domain Thivi_0762 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Thivi_0762 IPR023758 tRNA-modifying protein YgfZ Thivi_0762 IPR017703 YgfZ/GcvT conserved site Thivi_0769 IPR002634 BolA protein Thivi_0769 IPR036065 BolA-like superfamily Thivi_0771 IPR001463 Sodium:alanine symporter Thivi_0772 IPR036584 Flagellar protein FliS superfamily Thivi_0772 IPR003713 Flagellar protein FliS Thivi_0775 IPR035924 FlaG-like superfamily Thivi_0775 IPR005186 FlaG protein Thivi_0776 IPR001492 Flagellin Thivi_0776 IPR001029 Flagellin, D0/D1 domain Thivi_0781 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0781 IPR035965 PAS domain superfamily Thivi_0781 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0781 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0781 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0781 IPR005467 Histidine kinase domain Thivi_0781 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0781 IPR000014 PAS domain Thivi_0781 IPR031967 PhoR, single Cache-like domain Thivi_0781 IPR013767 PAS fold Thivi_0782 IPR001789 Signal transduction response regulator, receiver domain Thivi_0782 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_0782 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0782 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_0782 IPR011006 CheY-like superfamily Thivi_0782 IPR039420 Transcriptional regulatory protein WalR-like Thivi_0797 IPR019734 Tetratricopeptide repeat Thivi_0797 IPR013026 Tetratricopeptide repeat-containing domain Thivi_0797 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0797 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_0799 IPR012902 Prokaryotic N-terminal methylation site Thivi_0799 IPR001082 Fimbrial protein pilin Thivi_0801 IPR012337 Ribonuclease H-like superfamily Thivi_0801 IPR036397 Ribonuclease H superfamily Thivi_0801 IPR025948 HTH-like domain Thivi_0801 IPR001584 Integrase, catalytic core Thivi_0804 IPR011551 NTP pyrophosphohydrolase MazG Thivi_0804 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Thivi_0805 IPR000086 NUDIX hydrolase domain Thivi_0805 IPR020084 NUDIX hydrolase, conserved site Thivi_0805 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_0806 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Thivi_0806 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Thivi_0806 IPR011005 Dihydropteroate synthase-like Thivi_0809 IPR000352 Peptide chain release factor class I Thivi_0810 IPR006015 Universal stress protein A family Thivi_0810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0810 IPR006016 UspA Thivi_0813 IPR003838 ABC transporter permease protein domain Thivi_0813 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0813 IPR003439 ABC transporter-like Thivi_0813 IPR017871 ABC transporter, conserved site Thivi_0813 IPR025857 MacB-like periplasmic core domain Thivi_0813 IPR003593 AAA+ ATPase domain Thivi_0813 IPR017911 ABC transporter, macrolide export, ATP-binding domain Thivi_0827 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_0827 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Thivi_0827 IPR011545 DEAD/DEAH box helicase domain Thivi_0827 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0827 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_0827 IPR001650 Helicase, C-terminal Thivi_0827 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_0827 IPR034415 CsdA, RNA recognition motif Thivi_0827 IPR028618 ATP-dependent RNA helicase DeaD Thivi_0827 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0833 IPR002686 Transposase IS200-like Thivi_0833 IPR036515 Transposase IS200-like superfamily Thivi_0835 IPR017937 Thioredoxin, conserved site Thivi_0835 IPR005746 Thioredoxin Thivi_0835 IPR036249 Thioredoxin-like superfamily Thivi_0835 IPR013766 Thioredoxin domain Thivi_0836 IPR013766 Thioredoxin domain Thivi_0836 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_0836 IPR036249 Thioredoxin-like superfamily Thivi_0838 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal Thivi_0838 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0838 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Thivi_0838 IPR012094 tRNA(Ile)-lysidine synthase Thivi_0838 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain Thivi_0838 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal Thivi_0840 IPR001095 Acetyl-CoA carboxylase, alpha subunit Thivi_0840 IPR029045 ClpP/crotonase-like domain superfamily Thivi_0840 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal Thivi_0843 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_0843 IPR003010 Carbon-nitrogen hydrolase Thivi_0845 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Thivi_0845 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thivi_0849 IPR000014 PAS domain Thivi_0849 IPR000700 PAS-associated, C-terminal Thivi_0849 IPR035965 PAS domain superfamily Thivi_0849 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_0849 IPR005467 Histidine kinase domain Thivi_0849 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0849 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0849 IPR013767 PAS fold Thivi_0849 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_0849 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_0850 IPR001789 Signal transduction response regulator, receiver domain Thivi_0850 IPR000792 Transcription regulator LuxR, C-terminal Thivi_0850 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0850 IPR011006 CheY-like superfamily Thivi_0851 IPR002686 Transposase IS200-like Thivi_0851 IPR036515 Transposase IS200-like superfamily Thivi_0853 IPR042095 Sulfatase-modifying factor enzyme superfamily Thivi_0853 IPR005532 Sulfatase-modifying factor enzyme Thivi_0853 IPR016187 C-type lectin fold Thivi_0858 IPR002852 Uncharacterised protein family UPF0251 Thivi_0859 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thivi_0859 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Thivi_0859 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Thivi_0859 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Thivi_0859 IPR005805 Rieske iron-sulphur protein, C-terminal Thivi_0859 IPR014349 Rieske iron-sulphur protein Thivi_0863 IPR010223 ATP binding protein MinD, bacterial-type Thivi_0863 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0863 IPR025501 ATP binding protein MinD Thivi_0863 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0868 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0868 IPR009057 Homeobox-like domain superfamily Thivi_0868 IPR011006 CheY-like superfamily Thivi_0868 IPR003593 AAA+ ATPase domain Thivi_0868 IPR002197 DNA binding HTH domain, Fis-type Thivi_0868 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_0868 IPR025944 Sigma-54 interaction domain, conserved site Thivi_0868 IPR001789 Signal transduction response regulator, receiver domain Thivi_0868 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_0868 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_0871 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0871 IPR000792 Transcription regulator LuxR, C-terminal Thivi_0871 IPR001789 Signal transduction response regulator, receiver domain Thivi_0871 IPR011006 CheY-like superfamily Thivi_0872 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily Thivi_0872 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Thivi_0874 IPR024163 Aerotolerance regulator, N-terminal Thivi_0874 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0874 IPR022933 Uncharacterised protein family UPF0353 Thivi_0874 IPR002035 von Willebrand factor, type A Thivi_0876 IPR001492 Flagellin Thivi_0876 IPR001029 Flagellin, D0/D1 domain Thivi_0877 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0877 IPR025714 Methyltransferase domain Thivi_0882 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0882 IPR008884 Macrocin-O-methyltransferase Thivi_0884 IPR013691 C-methyltransferase Thivi_0884 IPR038576 Methyltransferase putative zinc binding domain superfamily Thivi_0884 IPR013630 Methyltransferase putative zinc binding domain Thivi_0884 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0885 IPR011051 RmlC-like cupin domain superfamily Thivi_0885 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Thivi_0885 IPR014710 RmlC-like jelly roll fold Thivi_0886 IPR013445 CDP-glucose 4,6-dehydratase Thivi_0886 IPR036291 NAD(P)-binding domain superfamily Thivi_0886 IPR016040 NAD(P)-binding domain Thivi_0887 IPR005835 Nucleotidyl transferase domain Thivi_0887 IPR013446 Glucose-1-phosphate cytidylyltransferase Thivi_0887 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0890 IPR000889 Glutathione peroxidase Thivi_0890 IPR029759 Glutathione peroxidase active site Thivi_0890 IPR029760 Glutathione peroxidase conserved site Thivi_0890 IPR036249 Thioredoxin-like superfamily Thivi_0891 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thivi_0891 IPR017938 Riboflavin synthase-like beta-barrel Thivi_0891 IPR017927 FAD-binding domain, ferredoxin reductase-type Thivi_0891 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Thivi_0891 IPR033892 Ferredoxin--NADP reductase, bacteria Thivi_0891 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0892 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_0892 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Thivi_0893 IPR025980 ATP-sulfurylase PUA-like domain Thivi_0893 IPR015947 PUA-like superfamily Thivi_0893 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0893 IPR020792 Sulphate adenylyltransferase, prokaryotic-type Thivi_0893 IPR024951 Sulphate adenylyltransferase catalytic domain Thivi_0893 IPR002650 Sulphate adenylyltransferase Thivi_0895 IPR023346 Lysozyme-like domain superfamily Thivi_0895 IPR008258 Transglycosylase SLT domain 1 Thivi_0895 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0895 IPR023703 Membrane-bound lytic murein transglycosylase F Thivi_0896 IPR010275 Protein of unknown function DUF882 Thivi_0896 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Thivi_0896 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_0897 IPR001900 Ribonuclease II/R Thivi_0897 IPR012340 Nucleic acid-binding, OB-fold Thivi_0898 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Thivi_0898 IPR003439 ABC transporter-like Thivi_0898 IPR017871 ABC transporter, conserved site Thivi_0898 IPR003593 AAA+ ATPase domain Thivi_0898 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0899 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0899 IPR036291 NAD(P)-binding domain superfamily Thivi_0899 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Thivi_0900 IPR009051 Alpha-helical ferredoxin Thivi_0900 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 Thivi_0900 IPR023753 FAD/NAD(P)-binding domain Thivi_0900 IPR028261 Dihydroprymidine dehydrogenase domain II Thivi_0900 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0900 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0902 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_0902 IPR035906 MetI-like superfamily Thivi_0903 IPR035906 MetI-like superfamily Thivi_0903 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Thivi_0903 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_0913 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_0913 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_0913 IPR003356 DNA methylase, adenine-specific Thivi_0913 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_0913 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0914 IPR018109 Folylpolyglutamate synthetase, conserved site Thivi_0914 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_0914 IPR013221 Mur ligase, central Thivi_0914 IPR004101 Mur ligase, C-terminal Thivi_0914 IPR001645 Folylpolyglutamate synthetase Thivi_0914 IPR036565 Mur-like, catalytic domain superfamily Thivi_0915 IPR034733 Acetyl-CoA carboxylase Thivi_0915 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Thivi_0915 IPR029045 ClpP/crotonase-like domain superfamily Thivi_0915 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal Thivi_0915 IPR041010 Acetyl-coA carboxylase zinc finger domain Thivi_0916 IPR018204 Tryptophan synthase, alpha chain, active site Thivi_0916 IPR013785 Aldolase-type TIM barrel Thivi_0916 IPR002028 Tryptophan synthase, alpha chain Thivi_0916 IPR011060 Ribulose-phosphate binding barrel Thivi_0917 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0917 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_0917 IPR006653 Tryptophan synthase, beta chain, conserved site Thivi_0917 IPR006654 Tryptophan synthase, beta chain Thivi_0917 IPR023026 Tryptophan synthase beta chain/beta chain-like Thivi_0918 IPR013785 Aldolase-type TIM barrel Thivi_0918 IPR011060 Ribulose-phosphate binding barrel Thivi_0918 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) Thivi_0919 IPR001406 Pseudouridine synthase I, TruA Thivi_0919 IPR020095 Pseudouridine synthase I, TruA, C-terminal Thivi_0919 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Thivi_0919 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_0921 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type Thivi_0921 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Thivi_0921 IPR036291 NAD(P)-binding domain superfamily Thivi_0921 IPR000534 Semialdehyde dehydrogenase, NAD-binding Thivi_0921 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Thivi_0921 IPR012080 Aspartate-semialdehyde dehydrogenase Thivi_0922 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Thivi_0922 IPR024084 Isopropylmalate dehydrogenase-like domain Thivi_0922 IPR004429 Isopropylmalate dehydrogenase Thivi_0923 IPR033940 3-isopropylmalate dehydratase, swivel domain Thivi_0923 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Thivi_0923 IPR004431 3-isopropylmalate dehydratase, small subunit Thivi_0923 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Thivi_0924 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Thivi_0924 IPR036008 Aconitase, iron-sulfur domain Thivi_0924 IPR033941 3-Isopropylmalate dehydratase, catalytic domain Thivi_0924 IPR004430 3-isopropylmalate dehydratase, large subunit Thivi_0924 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Thivi_0924 IPR018136 Aconitase family, 4Fe-4S cluster binding site Thivi_0925 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Thivi_0925 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily Thivi_0925 IPR033729 Serine-tRNA ligase catalytic core domain Thivi_0925 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_0925 IPR002317 Serine-tRNA ligase, type1 Thivi_0925 IPR015866 Serine-tRNA synthetase, type1, N-terminal Thivi_0925 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Thivi_0928 IPR003439 ABC transporter-like Thivi_0928 IPR017871 ABC transporter, conserved site Thivi_0928 IPR003838 ABC transporter permease protein domain Thivi_0928 IPR003593 AAA+ ATPase domain Thivi_0928 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0928 IPR025857 MacB-like periplasmic core domain Thivi_0928 IPR017911 ABC transporter, macrolide export, ATP-binding domain Thivi_0929 IPR017911 ABC transporter, macrolide export, ATP-binding domain Thivi_0929 IPR003439 ABC transporter-like Thivi_0929 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0929 IPR003593 AAA+ ATPase domain Thivi_0929 IPR017871 ABC transporter, conserved site Thivi_0929 IPR003838 ABC transporter permease protein domain Thivi_0929 IPR025857 MacB-like periplasmic core domain Thivi_0930 IPR025857 MacB-like periplasmic core domain Thivi_0930 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0930 IPR003439 ABC transporter-like Thivi_0930 IPR003838 ABC transporter permease protein domain Thivi_0930 IPR017871 ABC transporter, conserved site Thivi_0930 IPR017911 ABC transporter, macrolide export, ATP-binding domain Thivi_0930 IPR003593 AAA+ ATPase domain Thivi_0932 IPR002481 Ferric-uptake regulator Thivi_0932 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0932 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0933 IPR007450 Lipoprotein SmpA/OmlA Thivi_0933 IPR026592 Outer membrane protein assembly factor BamE Thivi_0933 IPR037873 BamE-like Thivi_0934 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_0934 IPR005346 RnfH protein Thivi_0934 IPR037021 RnfH superfamily Thivi_0935 IPR005031 Coenzyme Q-binding protein COQ10, START domain Thivi_0935 IPR023393 START-like domain superfamily Thivi_0936 IPR037272 Sodium:neurotransmitter symporter superfamily Thivi_0936 IPR000175 Sodium:neurotransmitter symporter Thivi_0937 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thivi_0937 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Thivi_0937 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thivi_0937 IPR005841 Alpha-D-phosphohexomutase superfamily Thivi_0937 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thivi_0937 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thivi_0937 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thivi_0937 IPR006352 Phosphoglucosamine mutase, bacterial type Thivi_0937 IPR016066 Alpha-D-phosphohexomutase, conserved site Thivi_0938 IPR003959 ATPase, AAA-type, core Thivi_0938 IPR003593 AAA+ ATPase domain Thivi_0938 IPR041569 AAA ATPase, AAA+ lid domain Thivi_0938 IPR000642 Peptidase M41 Thivi_0938 IPR005936 Peptidase, FtsH Thivi_0938 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0938 IPR011546 Peptidase M41, FtsH extracellular Thivi_0938 IPR037219 Peptidase M41-like Thivi_0938 IPR003960 ATPase, AAA-type, conserved site Thivi_0939 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0939 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Thivi_0939 IPR015507 Ribosomal RNA large subunit methyltransferase E Thivi_0941 IPR036369 High potential iron-sulphur protein superfamily Thivi_0941 IPR000170 High potential iron-sulphur protein Thivi_0941 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_0942 IPR000064 Endopeptidase, NLPC/P60 domain Thivi_0942 IPR038765 Papain-like cysteine peptidase superfamily Thivi_0943 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Thivi_0943 IPR023753 FAD/NAD(P)-binding domain Thivi_0943 IPR005982 Thioredoxin reductase Thivi_0943 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0945 IPR016181 Acyl-CoA N-acyltransferase Thivi_0945 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Thivi_0945 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal Thivi_0946 IPR017138 Aspartate/glutamate leucyltransferase Thivi_0946 IPR007471 N-end aminoacyl transferase, N-terminal Thivi_0946 IPR016181 Acyl-CoA N-acyltransferase Thivi_0946 IPR030700 N-end rule aminoacyl transferase Thivi_0946 IPR007472 N-end rule aminoacyl transferase, C-terminal Thivi_0947 IPR022967 RNA-binding domain, S1 Thivi_0947 IPR006196 RNA-binding domain, S1, IF1 type Thivi_0947 IPR004368 Translation initiation factor IF-1 Thivi_0947 IPR012340 Nucleic acid-binding, OB-fold Thivi_0948 IPR029787 Nucleotide cyclase Thivi_0948 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase Thivi_0961 IPR017925 Dihydrofolate reductase conserved site Thivi_0961 IPR024072 Dihydrofolate reductase-like domain superfamily Thivi_0961 IPR012259 Dihydrofolate reductase Thivi_0961 IPR001796 Dihydrofolate reductase domain Thivi_0962 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Thivi_0963 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase Thivi_0963 IPR004821 Cytidyltransferase-like domain Thivi_0963 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0967 IPR024370 PBP domain Thivi_0967 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS Thivi_0968 IPR003593 AAA+ ATPase domain Thivi_0968 IPR003439 ABC transporter-like Thivi_0968 IPR017871 ABC transporter, conserved site Thivi_0968 IPR015850 ABC transporter, phosphate import, PstB Thivi_0968 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0968 IPR005670 Phosphate transport system permease protein 1 Thivi_0969 IPR005672 Phosphate transport system permease protein PstA Thivi_0969 IPR035906 MetI-like superfamily Thivi_0969 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_0970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_0970 IPR035906 MetI-like superfamily Thivi_0970 IPR011864 Phosphate ABC transporter, permease protein PstC Thivi_0971 IPR024370 PBP domain Thivi_0971 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS Thivi_0973 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS Thivi_0973 IPR024370 PBP domain Thivi_0974 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thivi_0974 IPR000811 Glycosyl transferase, family 35 Thivi_0974 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Thivi_0975 IPR016898 Polyphosphate kinase 2 Thivi_0975 IPR022486 Polyphosphate kinase 2, PA0141 Thivi_0975 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0975 IPR022488 Polyphosphate kinase-2-related Thivi_0976 IPR002505 Phosphate acetyl/butaryl transferase Thivi_0976 IPR012147 Phosphate acetyl/butyryltransferase Thivi_0977 IPR023865 Aliphatic acid kinase, short-chain, conserved site Thivi_0977 IPR000890 Aliphatic acid kinase, short-chain Thivi_0977 IPR004372 Acetate/propionate kinase Thivi_0978 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0978 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Thivi_0978 IPR036291 NAD(P)-binding domain superfamily Thivi_0979 IPR029058 Alpha/Beta hydrolase fold Thivi_0979 IPR024501 Protein of unknown function DUF3141 Thivi_0980 IPR013094 Alpha/beta hydrolase fold-3 Thivi_0980 IPR029058 Alpha/Beta hydrolase fold Thivi_0982 IPR008538 Domain of unknown function DUF820 Thivi_0982 IPR011335 Restriction endonuclease type II-like Thivi_0983 IPR000965 GPR domain Thivi_0983 IPR012134 Glutamate-5-semialdehyde dehydrogenase Thivi_0983 IPR016162 Aldehyde dehydrogenase, N-terminal Thivi_0983 IPR015590 Aldehyde dehydrogenase domain Thivi_0983 IPR016163 Aldehyde dehydrogenase, C-terminal Thivi_0983 IPR016161 Aldehyde/histidinol dehydrogenase Thivi_0983 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Thivi_0985 IPR007485 LPS-assembly lipoprotein LptE Thivi_0986 IPR025709 Leucyl-tRNA synthetase, editing domain Thivi_0986 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thivi_0986 IPR002302 Leucine-tRNA ligase Thivi_0986 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thivi_0986 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_0986 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thivi_0986 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0986 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_0988 IPR028299 ClpA/B, conserved site 2 Thivi_0988 IPR001943 UVR domain Thivi_0988 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0988 IPR041546 ClpA/ClpB, AAA lid domain Thivi_0988 IPR001270 ClpA/B family Thivi_0988 IPR004176 Clp, N-terminal Thivi_0988 IPR036628 Clp, N-terminal domain superfamily Thivi_0988 IPR019489 Clp ATPase, C-terminal Thivi_0988 IPR003959 ATPase, AAA-type, core Thivi_0988 IPR018368 ClpA/B, conserved site 1 Thivi_0988 IPR003593 AAA+ ATPase domain Thivi_0989 IPR042099 AMP-dependent synthetase-like superfamily Thivi_0989 IPR020845 AMP-binding, conserved site Thivi_0989 IPR000873 AMP-dependent synthetase/ligase Thivi_0992 IPR022919 Peptidase M48, protease HtpX, putative Thivi_0992 IPR001915 Peptidase M48 Thivi_0994 IPR020602 GTP cyclohydrolase I domain Thivi_0994 IPR018234 GTP cyclohydrolase I, conserved site Thivi_0994 IPR001474 GTP cyclohydrolase I Thivi_0995 IPR036291 NAD(P)-binding domain superfamily Thivi_0995 IPR014359 Ketol-acid reductoisomerase, prokaryotic Thivi_0995 IPR013116 Ketol-acid reductoisomerase, N-terminal Thivi_0995 IPR000506 Ketol-acid reductoisomerase, C-terminal Thivi_0995 IPR013023 Ketol-acid reductoisomerase Thivi_0995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_1003 IPR039557 AHAS, ACT domain Thivi_1003 IPR019455 Acetolactate synthase, small subunit, C-terminal Thivi_1003 IPR002912 ACT domain Thivi_1003 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Thivi_1003 IPR004789 Acetolactate synthase, small subunit Thivi_1004 IPR029061 Thiamin diphosphate-binding fold Thivi_1004 IPR000399 TPP-binding enzyme, conserved site Thivi_1004 IPR012000 Thiamine pyrophosphate enzyme, central domain Thivi_1004 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thivi_1004 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_1004 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thivi_1004 IPR039368 Acetolactate synthase large subunit, TPP binding domain Thivi_1004 IPR012846 Acetolactate synthase, large subunit, biosynthetic Thivi_1006 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Thivi_1006 IPR004154 Anticodon-binding Thivi_1006 IPR036621 Anticodon-binding domain superfamily Thivi_1006 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily Thivi_1006 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_1006 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Thivi_1006 IPR002316 Proline-tRNA ligase, class IIa Thivi_1006 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Thivi_1006 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Thivi_1006 IPR033730 Prokaryote proline-tRNA ligase core domain Thivi_1007 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA Thivi_1007 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Thivi_1007 IPR029069 HotDog domain superfamily Thivi_1008 IPR007459 DNA polymerase III chi subunit, HolC Thivi_1008 IPR036768 DNA polymerase III subunit chi superfamily Thivi_1009 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1009 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1009 IPR001789 Signal transduction response regulator, receiver domain Thivi_1009 IPR019247 Histidine kinase BarA, N-terminal Thivi_1009 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1009 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1009 IPR005467 Histidine kinase domain Thivi_1009 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1009 IPR011006 CheY-like superfamily Thivi_1009 IPR036641 HPT domain superfamily Thivi_1009 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1009 IPR003660 HAMP domain Thivi_1010 IPR001789 Signal transduction response regulator, receiver domain Thivi_1010 IPR037522 HD-GYP domain Thivi_1010 IPR003607 HD/PDEase domain Thivi_1010 IPR011006 CheY-like superfamily Thivi_1011 IPR009003 Peptidase S1, PA clan Thivi_1011 IPR036034 PDZ superfamily Thivi_1011 IPR001940 Peptidase S1C Thivi_1011 IPR001478 PDZ domain Thivi_1011 IPR011782 Peptidase S1C, Do Thivi_1015 IPR004485 Cobalamin biosynthesis CobD/CbiB Thivi_1018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Thivi_1018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1018 IPR025501 ATP binding protein MinD Thivi_1019 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1019 IPR025669 AAA domain Thivi_1022 IPR032882 SrkA/RdoA protein kinase Thivi_1022 IPR011009 Protein kinase-like domain superfamily Thivi_1022 IPR002575 Aminoglycoside phosphotransferase Thivi_1024 IPR007835 MOFRL domain Thivi_1024 IPR039760 MOFRL domain-containing protein Thivi_1024 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Thivi_1024 IPR038614 Glycerate kinase, N-terminal domain superfamily Thivi_1024 IPR025286 MOFRL-associated domain Thivi_1026 IPR000086 NUDIX hydrolase domain Thivi_1026 IPR003564 Dihydroneopterin triphosphate diphosphatase Thivi_1026 IPR020084 NUDIX hydrolase, conserved site Thivi_1026 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_1027 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thivi_1027 IPR012340 Nucleic acid-binding, OB-fold Thivi_1027 IPR029351 GAD domain Thivi_1027 IPR004115 GAD-like domain superfamily Thivi_1027 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Thivi_1027 IPR004524 Aspartate-tRNA ligase, type 1 Thivi_1027 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_1027 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thivi_1028 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Thivi_1028 IPR006439 HAD hydrolase, subfamily IA Thivi_1028 IPR023214 HAD superfamily Thivi_1028 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_1028 IPR036412 HAD-like superfamily Thivi_1028 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_1029 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1029 IPR010233 Ubiquinone biosynthesis O-methyltransferase Thivi_1030 IPR039429 Serine hydroxymethyltransferase-like domain Thivi_1030 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Thivi_1030 IPR001085 Serine hydroxymethyltransferase Thivi_1030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1030 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1031 IPR003796 Ribonucleotide reductase regulator NrdR-like Thivi_1031 IPR005144 ATP-cone domain Thivi_1032 IPR024072 Dihydrofolate reductase-like domain superfamily Thivi_1032 IPR004794 Riboflavin biosynthesis protein RibD Thivi_1032 IPR011549 Riboflavin-specific deaminase, C-terminal Thivi_1032 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Thivi_1032 IPR016193 Cytidine deaminase-like Thivi_1032 IPR002125 Cytidine and deoxycytidylate deaminase domain Thivi_1032 IPR016192 APOBEC/CMP deaminase, zinc-binding Thivi_1033 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Thivi_1033 IPR017938 Riboflavin synthase-like beta-barrel Thivi_1033 IPR026017 Lumazine-binding domain Thivi_1033 IPR001783 Lumazine-binding protein Thivi_1034 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_1034 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Thivi_1034 IPR032677 GTP cyclohydrolase II Thivi_1034 IPR036144 RibA-like superfamily Thivi_1035 IPR036467 Lumazine/riboflavin synthase superfamily Thivi_1035 IPR002180 Lumazine/riboflavin synthase Thivi_1035 IPR034964 Lumazine synthase Thivi_1036 IPR011605 NusB antitermination factor Thivi_1036 IPR035926 NusB-like superfamily Thivi_1036 IPR006027 NusB/RsmB/TIM44 Thivi_1037 IPR010918 PurM-like, C-terminal domain Thivi_1037 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1037 IPR016188 PurM-like, N-terminal domain Thivi_1037 IPR006283 Thiamine-monophosphate kinase Thivi_1037 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1040 IPR008250 P-type ATPase, A domain superfamily Thivi_1040 IPR006121 Heavy metal-associated domain, HMA Thivi_1040 IPR036412 HAD-like superfamily Thivi_1040 IPR023214 HAD superfamily Thivi_1040 IPR023298 P-type ATPase, transmembrane domain superfamily Thivi_1040 IPR017969 Heavy-metal-associated, conserved site Thivi_1040 IPR036163 Heavy metal-associated domain superfamily Thivi_1040 IPR023299 P-type ATPase, cytoplasmic domain N Thivi_1040 IPR018303 P-type ATPase, phosphorylation site Thivi_1040 IPR001757 P-type ATPase Thivi_1040 IPR027256 P-type ATPase, subfamily IB Thivi_1043 IPR032879 FixG, C-terminal immunoglobulin-like domain Thivi_1043 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Thivi_1043 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1043 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1043 IPR013783 Immunoglobulin-like fold Thivi_1044 IPR008168 Cytochrome c, class IC Thivi_1044 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Thivi_1044 IPR009056 Cytochrome c-like domain Thivi_1044 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Thivi_1044 IPR036909 Cytochrome c-like domain superfamily Thivi_1044 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Thivi_1047 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Thivi_1047 IPR000883 Cytochrome c oxidase subunit I Thivi_1047 IPR036927 Cytochrome c oxidase-like, subunit I superfamily Thivi_1047 IPR023616 Cytochrome c oxidase-like, subunit I domain Thivi_1047 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Thivi_1048 IPR007208 Na(+)/H(+) antiporter subunit F-like Thivi_1049 IPR005133 Na+/H+ antiporter subunit G Thivi_1052 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_1053 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Thivi_1053 IPR003918 NADH:ubiquinone oxidoreductase Thivi_1053 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_1054 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Thivi_1054 IPR003918 NADH:ubiquinone oxidoreductase Thivi_1054 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_1056 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_1056 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thivi_1057 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Thivi_1057 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site Thivi_1057 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thivi_1057 IPR010218 NADH dehydrogenase, subunit C Thivi_1058 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thivi_1058 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Thivi_1058 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Thivi_1058 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_1058 IPR001135 NADH-quinone oxidoreductase, subunit D Thivi_1062 IPR002758 Na+/H+ antiporter subunit E Thivi_1064 IPR004805 DNA polymerase III, alpha subunit Thivi_1064 IPR016195 Polymerase/histidinol phosphatase-like Thivi_1064 IPR004013 PHP domain Thivi_1064 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thivi_1064 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thivi_1064 IPR029460 DNA polymerase, helix-hairpin-helix motif Thivi_1064 IPR040982 DNA polymerase III alpha subunit finger domain Thivi_1064 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain Thivi_1064 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain Thivi_1065 IPR023555 Thiol-disulphide oxidoreductase ResA Thivi_1065 IPR036249 Thioredoxin-like superfamily Thivi_1065 IPR017937 Thioredoxin, conserved site Thivi_1065 IPR013766 Thioredoxin domain Thivi_1065 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thivi_1066 IPR023679 Uncharacterised protein family UPF0761, bacterial Thivi_1066 IPR017039 Virulence factor BrkB Thivi_1069 IPR005651 Trm112-like Thivi_1073 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain Thivi_1073 IPR033641 CRISPR-associated protein Cas1, type I-E Thivi_1073 IPR002729 CRISPR-associated protein Cas1 Thivi_1073 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain Thivi_1073 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype Thivi_1079 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1079 IPR006483 CRISPR-associated Cas3-type HD domain Thivi_1079 IPR001650 Helicase, C-terminal Thivi_1079 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Thivi_1079 IPR011545 DEAD/DEAH box helicase domain Thivi_1079 IPR035011 CRISPR-associated endonuclease/helicase Cas3 Thivi_1079 IPR006474 Helicase Cas3, CRISPR-associated, core Thivi_1079 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1084 IPR002744 MIP18 family-like Thivi_1084 IPR034904 Fe-S cluster assembly domain superfamily Thivi_1085 IPR011542 SUF system FeS cluster assembly, SufD Thivi_1085 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Thivi_1085 IPR000825 SUF system FeS cluster assembly, SufBD Thivi_1086 IPR010230 FeS cluster assembly SUF system, ATPase SufC Thivi_1086 IPR017871 ABC transporter, conserved site Thivi_1086 IPR003439 ABC transporter-like Thivi_1086 IPR003593 AAA+ ATPase domain Thivi_1086 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1087 IPR010231 SUF system FeS cluster assembly, SufB Thivi_1087 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Thivi_1087 IPR000825 SUF system FeS cluster assembly, SufBD Thivi_1090 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain Thivi_1090 IPR001633 EAL domain Thivi_1090 IPR035919 EAL domain superfamily Thivi_1095 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_1095 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_1095 IPR004323 Divalent ion tolerance protein, CutA Thivi_1096 IPR022910 Thiol:disulphide interchange protein DsbD Thivi_1096 IPR017937 Thioredoxin, conserved site Thivi_1096 IPR013766 Thioredoxin domain Thivi_1096 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Thivi_1096 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Thivi_1096 IPR036249 Thioredoxin-like superfamily Thivi_1096 IPR035671 DsbD gamma Thivi_1096 IPR003834 Cytochrome C biogenesis protein, transmembrane domain Thivi_1097 IPR017937 Thioredoxin, conserved site Thivi_1097 IPR013766 Thioredoxin domain Thivi_1097 IPR036249 Thioredoxin-like superfamily Thivi_1097 IPR013740 Redoxin Thivi_1097 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE Thivi_1099 IPR036441 Dehydroquinase, class II superfamily Thivi_1099 IPR018509 Dehydroquinase, class II, conserved site Thivi_1099 IPR001874 Dehydroquinase, class II Thivi_1100 IPR001882 Biotin-binding site Thivi_1100 IPR000089 Biotin/lipoyl attachment Thivi_1100 IPR011053 Single hybrid motif Thivi_1100 IPR001249 Acetyl-CoA biotin carboxyl carrier Thivi_1101 IPR013815 ATP-grasp fold, subdomain 1 Thivi_1101 IPR011054 Rudiment single hybrid motif Thivi_1101 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1101 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thivi_1101 IPR005482 Biotin carboxylase, C-terminal Thivi_1101 IPR011761 ATP-grasp fold Thivi_1101 IPR005481 Biotin carboxylase-like, N-terminal domain Thivi_1101 IPR011764 Biotin carboxylation domain Thivi_1101 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Thivi_1103 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1103 IPR004498 Ribosomal protein L11 methyltransferase Thivi_1104 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1104 IPR001091 Restriction/modification DNA-methylase Thivi_1104 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_1104 IPR002941 DNA methylase N-4/N-6 Thivi_1104 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Thivi_1108 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1108 IPR041698 Methyltransferase domain 25 Thivi_1108 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Thivi_1110 IPR018517 tRNA-dihydrouridine synthase, conserved site Thivi_1110 IPR001269 tRNA-dihydrouridine synthase Thivi_1110 IPR035587 DUS-like, FMN-binding domain Thivi_1110 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Thivi_1110 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Thivi_1110 IPR013785 Aldolase-type TIM barrel Thivi_1110 IPR032887 tRNA-dihydrouridine synthase B Thivi_1111 IPR009057 Homeobox-like domain superfamily Thivi_1111 IPR005412 DNA-binding protein Fis Thivi_1111 IPR002197 DNA binding HTH domain, Fis-type Thivi_1112 IPR011607 Methylglyoxal synthase-like domain Thivi_1112 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_1112 IPR016193 Cytidine deaminase-like Thivi_1112 IPR002695 Bifunctional purine biosynthesis protein PurH-like Thivi_1112 IPR024051 AICAR transformylase, duplicated domain superfamily Thivi_1113 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily Thivi_1113 IPR001451 Hexapeptide repeat Thivi_1113 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Thivi_1113 IPR011004 Trimeric LpxA-like superfamily Thivi_1113 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal Thivi_1115 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Thivi_1115 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily Thivi_1115 IPR000115 Phosphoribosylglycinamide synthetase Thivi_1115 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Thivi_1115 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Thivi_1115 IPR013815 ATP-grasp fold, subdomain 1 Thivi_1115 IPR011761 ATP-grasp fold Thivi_1115 IPR011054 Rudiment single hybrid motif Thivi_1115 IPR020559 Phosphoribosylglycinamide synthetase, conserved site Thivi_1115 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1116 IPR001789 Signal transduction response regulator, receiver domain Thivi_1116 IPR011006 CheY-like superfamily Thivi_1120 IPR002575 Aminoglycoside phosphotransferase Thivi_1120 IPR011009 Protein kinase-like domain superfamily Thivi_1121 IPR007543 LptD, C-terminal Thivi_1121 IPR020889 LPS-assembly protein LptD Thivi_1121 IPR005653 Organic solvent tolerance-like, N-terminal Thivi_1122 IPR027304 Trigger factor/SurA domain superfamily Thivi_1122 IPR015391 SurA N-terminal Thivi_1122 IPR023034 Peptidyl-prolyl isomerase SurA Thivi_1122 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thivi_1122 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thivi_1123 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase Thivi_1123 IPR005255 PdxA family Thivi_1124 IPR000462 CDP-alcohol phosphatidyltransferase Thivi_1124 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase Thivi_1125 IPR002023 NADH-quinone oxidoreductase subunit E-like Thivi_1125 IPR036249 Thioredoxin-like superfamily Thivi_1125 IPR042128 NuoE domain Thivi_1125 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal Thivi_1126 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Thivi_1126 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1126 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1126 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_1126 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_1126 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Thivi_1126 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Thivi_1128 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_1128 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal Thivi_1128 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Thivi_1128 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Thivi_1128 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Thivi_1128 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_1128 IPR006656 Molybdopterin oxidoreductase Thivi_1128 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_1129 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_1129 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_1131 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_1131 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thivi_1131 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_1133 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1133 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_1133 IPR036291 NAD(P)-binding domain superfamily Thivi_1134 IPR001792 Acylphosphatase-like domain Thivi_1134 IPR036046 Acylphosphatase-like domain superfamily Thivi_1134 IPR017968 Acylphosphatase, conserved site Thivi_1134 IPR020456 Acylphosphatase Thivi_1136 IPR010089 Flavoprotein WrbA-like Thivi_1136 IPR005025 NADPH-dependent FMN reductase-like Thivi_1136 IPR029039 Flavoprotein-like superfamily Thivi_1136 IPR001226 Flavodoxin, conserved site Thivi_1136 IPR008254 Flavodoxin/nitric oxide synthase Thivi_1137 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae Thivi_1137 IPR017788 DnaA regulatory inactivator Hda Thivi_1137 IPR013317 Chromosomal replication initiator protein DnaA Thivi_1137 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_1137 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1138 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Thivi_1138 IPR000462 CDP-alcohol phosphatidyltransferase Thivi_1139 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1139 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Thivi_1139 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1139 IPR010918 PurM-like, C-terminal domain Thivi_1139 IPR016188 PurM-like, N-terminal domain Thivi_1140 IPR002376 Formyl transferase, N-terminal Thivi_1140 IPR036477 Formyl transferase, N-terminal domain superfamily Thivi_1140 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Thivi_1140 IPR004607 Phosphoribosylglycinamide formyltransferase Thivi_1145 IPR029052 Metallo-dependent phosphatase-like Thivi_1145 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_1145 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase Thivi_1146 IPR016154 Heat shock protein Hsp33, C-terminal Thivi_1146 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Thivi_1146 IPR016153 Heat shock protein Hsp33, N-terminal Thivi_1146 IPR000397 Heat shock protein Hsp33 Thivi_1147 IPR005234 Chromosome segregation/condensation protein ScpB Thivi_1147 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1147 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1148 IPR003768 Segregation and condensation protein A Thivi_1149 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1149 IPR002305 Aminoacyl-tRNA synthetase, class Ic Thivi_1149 IPR002306 Tryptophan-tRNA ligase Thivi_1149 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_1150 IPR008915 Peptidase M50 Thivi_1151 IPR006070 YrdC-like domain Thivi_1151 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_1152 IPR004013 PHP domain Thivi_1152 IPR016195 Polymerase/histidinol phosphatase-like Thivi_1152 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thivi_1154 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_1154 IPR000727 Target SNARE coiled-coil homology domain Thivi_1154 IPR004090 Chemotaxis methyl-accepting receptor Thivi_1154 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_1154 IPR003660 HAMP domain Thivi_1155 IPR013780 Glycosyl hydrolase, all-beta Thivi_1155 IPR017853 Glycoside hydrolase superfamily Thivi_1155 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_1157 IPR027354 YcgL domain Thivi_1157 IPR038068 YcgL-like superfamily Thivi_1157 IPR006380 Sucrose-phosphatase-like, N-terminal Thivi_1157 IPR023214 HAD superfamily Thivi_1157 IPR006379 HAD-superfamily hydrolase, subfamily IIB Thivi_1157 IPR036412 HAD-like superfamily Thivi_1158 IPR012820 Sucrose synthase, plant/cyanobacteria Thivi_1158 IPR001296 Glycosyl transferase, family 1 Thivi_1158 IPR000368 Sucrose synthase Thivi_1159 IPR014172 TonB-system energizer ExbB type-2 Thivi_1159 IPR002898 MotA/TolQ/ExbB proton channel Thivi_1160 IPR003400 Biopolymer transport protein ExbD/TolR Thivi_1160 IPR014171 TonB system transport protein ExbD type-2 Thivi_1164 IPR024041 Ammonium transporter AmtB-like domain Thivi_1164 IPR001905 Ammonium transporter Thivi_1164 IPR018047 Ammonium transporter, conserved site Thivi_1164 IPR029020 Ammonium/urea transporter Thivi_1166 IPR002751 Metal transport protein CbiM/NikMN Thivi_1169 IPR003439 ABC transporter-like Thivi_1169 IPR003593 AAA+ ATPase domain Thivi_1169 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1169 IPR017871 ABC transporter, conserved site Thivi_1174 IPR013321 Arc-type ribbon-helix-helix Thivi_1174 IPR014864 Transcription factor, NikR, nickel binding C-terminal Thivi_1174 IPR022988 Nickel-responsive transcriptional regulator NikR Thivi_1174 IPR002145 Ribbon-helix-helix protein, CopG Thivi_1174 IPR010985 Ribbon-helix-helix Thivi_1174 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Thivi_1177 IPR016450 Uncharacterised conserved protein UCP005522 Thivi_1177 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1181 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thivi_1181 IPR003593 AAA+ ATPase domain Thivi_1181 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1181 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily Thivi_1181 IPR007692 DNA helicase, DnaB type Thivi_1181 IPR007694 DNA helicase, DnaB-like, C-terminal Thivi_1181 IPR007693 DNA helicase, DnaB-like, N-terminal Thivi_1182 IPR020594 Ribosomal protein L9, bacteria/chloroplast Thivi_1182 IPR000244 Ribosomal protein L9 Thivi_1182 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Thivi_1182 IPR020070 Ribosomal protein L9, N-terminal Thivi_1182 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Thivi_1182 IPR020069 Ribosomal protein L9, C-terminal Thivi_1182 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Thivi_1184 IPR001648 Ribosomal protein S18 Thivi_1184 IPR036870 Ribosomal protein S18 superfamily Thivi_1184 IPR018275 Ribosomal protein S18, conserved site Thivi_1185 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Thivi_1185 IPR035980 Ribosomal protein S6 superfamily Thivi_1185 IPR020814 Ribosomal protein S6, plastid/chloroplast Thivi_1185 IPR000529 Ribosomal protein S6 Thivi_1185 IPR020815 Ribosomal protein S6, conserved site Thivi_1194 IPR001387 Cro/C1-type helix-turn-helix domain Thivi_1194 IPR035569 Antitoxin epsilon/PezA domain superfamily Thivi_1194 IPR010982 Lambda repressor-like, DNA-binding domain superfamily Thivi_1197 IPR032806 H repeat-associated protein, N-terminal Thivi_1197 IPR002559 Transposase, IS4-like Thivi_1198 IPR016867 Glycine cleavage system transcriptional repressor Thivi_1198 IPR002912 ACT domain Thivi_1199 IPR036249 Thioredoxin-like superfamily Thivi_1199 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thivi_1199 IPR024706 Peroxiredoxin, AhpC-type Thivi_1199 IPR013766 Thioredoxin domain Thivi_1200 IPR002716 PIN domain Thivi_1200 IPR029060 PIN-like domain superfamily Thivi_1200 IPR003714 PhoH-like protein Thivi_1200 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1201 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Thivi_1201 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_1201 IPR005856 Cysteine synthase Thivi_1201 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_1201 IPR005858 Cysteine synthase CysM Thivi_1202 IPR003607 HD/PDEase domain Thivi_1202 IPR037522 HD-GYP domain Thivi_1202 IPR001789 Signal transduction response regulator, receiver domain Thivi_1202 IPR011006 CheY-like superfamily Thivi_1203 IPR011006 CheY-like superfamily Thivi_1203 IPR003607 HD/PDEase domain Thivi_1203 IPR037522 HD-GYP domain Thivi_1203 IPR001789 Signal transduction response regulator, receiver domain Thivi_1204 IPR001789 Signal transduction response regulator, receiver domain Thivi_1204 IPR011006 CheY-like superfamily Thivi_1204 IPR003607 HD/PDEase domain Thivi_1204 IPR037522 HD-GYP domain Thivi_1205 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1205 IPR019247 Histidine kinase BarA, N-terminal Thivi_1205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1205 IPR001789 Signal transduction response regulator, receiver domain Thivi_1205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1205 IPR036641 HPT domain superfamily Thivi_1205 IPR011006 CheY-like superfamily Thivi_1205 IPR003660 HAMP domain Thivi_1205 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1205 IPR005467 Histidine kinase domain Thivi_1206 IPR011006 CheY-like superfamily Thivi_1206 IPR003660 HAMP domain Thivi_1206 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1206 IPR005467 Histidine kinase domain Thivi_1206 IPR001789 Signal transduction response regulator, receiver domain Thivi_1206 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1206 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1206 IPR019247 Histidine kinase BarA, N-terminal Thivi_1206 IPR036641 HPT domain superfamily Thivi_1206 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1206 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1206 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1207 IPR011006 CheY-like superfamily Thivi_1207 IPR001789 Signal transduction response regulator, receiver domain Thivi_1207 IPR003607 HD/PDEase domain Thivi_1207 IPR037522 HD-GYP domain Thivi_1211 IPR003660 HAMP domain Thivi_1211 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Thivi_1211 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_1211 IPR004090 Chemotaxis methyl-accepting receptor Thivi_1211 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Thivi_1211 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Thivi_1213 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_1213 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_1213 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_1213 IPR025944 Sigma-54 interaction domain, conserved site Thivi_1213 IPR003593 AAA+ ATPase domain Thivi_1213 IPR011006 CheY-like superfamily Thivi_1213 IPR009057 Homeobox-like domain superfamily Thivi_1213 IPR002197 DNA binding HTH domain, Fis-type Thivi_1213 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1213 IPR001789 Signal transduction response regulator, receiver domain Thivi_1214 IPR036513 STAS domain superfamily Thivi_1214 IPR002645 STAS domain Thivi_1215 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1215 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1215 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1215 IPR011006 CheY-like superfamily Thivi_1215 IPR003660 HAMP domain Thivi_1215 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1215 IPR005467 Histidine kinase domain Thivi_1215 IPR001789 Signal transduction response regulator, receiver domain Thivi_1215 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1215 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1215 IPR036641 HPT domain superfamily Thivi_1215 IPR019247 Histidine kinase BarA, N-terminal Thivi_1216 IPR011006 CheY-like superfamily Thivi_1216 IPR003607 HD/PDEase domain Thivi_1216 IPR037522 HD-GYP domain Thivi_1216 IPR001789 Signal transduction response regulator, receiver domain Thivi_1217 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1217 IPR005467 Histidine kinase domain Thivi_1217 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1217 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1217 IPR000700 PAS-associated, C-terminal Thivi_1217 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1217 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1218 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Thivi_1218 IPR035909 Methylesterase CheB, C-terminal Thivi_1218 IPR011006 CheY-like superfamily Thivi_1218 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_1218 IPR001789 Signal transduction response regulator, receiver domain Thivi_1219 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_1219 IPR000727 Target SNARE coiled-coil homology domain Thivi_1219 IPR029151 Periplasmic sensor-like domain superfamily Thivi_1219 IPR033479 Double Cache domain 1 Thivi_1219 IPR003660 HAMP domain Thivi_1220 IPR005659 Chemoreceptor glutamine deamidase CheD Thivi_1220 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_1220 IPR038592 CheD-like superfamily Thivi_1221 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_1221 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_1221 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_1221 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_1221 IPR000780 MCP methyltransferase, CheR-type Thivi_1221 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1222 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding Thivi_1222 IPR004090 Chemotaxis methyl-accepting receptor Thivi_1222 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site Thivi_1222 IPR003660 HAMP domain Thivi_1222 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_1222 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily Thivi_1223 IPR002545 CheW-like domain Thivi_1223 IPR036061 CheW-like domain superfamily Thivi_1223 IPR039315 Chemotaxis protein CheW Thivi_1224 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1224 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_1224 IPR015162 CheY binding Thivi_1224 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1224 IPR005467 Histidine kinase domain Thivi_1224 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_1224 IPR036061 CheW-like domain superfamily Thivi_1224 IPR035891 CheY-binding domain of CheA Thivi_1224 IPR002545 CheW-like domain Thivi_1224 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1224 IPR036641 HPT domain superfamily Thivi_1224 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1224 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1225 IPR001789 Signal transduction response regulator, receiver domain Thivi_1225 IPR011006 CheY-like superfamily Thivi_1226 IPR005118 Transcription-repair-coupling factor, C-terminal domain Thivi_1226 IPR011545 DEAD/DEAH box helicase domain Thivi_1226 IPR037235 TRCF-like, C-terminal domain Thivi_1226 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1226 IPR004576 Transcription-repair coupling factor Thivi_1226 IPR001650 Helicase, C-terminal Thivi_1226 IPR036101 CarD-like/TRCF domain superfamily Thivi_1226 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1226 IPR041471 UvrB, interaction domain Thivi_1226 IPR003711 CarD-like/TRCF domain Thivi_1247 IPR002641 Patatin-like phospholipase domain Thivi_1247 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_1250 IPR035965 PAS domain superfamily Thivi_1250 IPR001610 PAC motif Thivi_1250 IPR013655 PAS fold-3 Thivi_1250 IPR035919 EAL domain superfamily Thivi_1250 IPR029787 Nucleotide cyclase Thivi_1250 IPR000700 PAS-associated, C-terminal Thivi_1250 IPR013656 PAS fold-4 Thivi_1250 IPR000014 PAS domain Thivi_1250 IPR001633 EAL domain Thivi_1250 IPR000160 GGDEF domain Thivi_1253 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1253 IPR003959 ATPase, AAA-type, core Thivi_1253 IPR017730 Chaperonin ClpB Thivi_1253 IPR019489 Clp ATPase, C-terminal Thivi_1253 IPR036628 Clp, N-terminal domain superfamily Thivi_1253 IPR004176 Clp, N-terminal Thivi_1253 IPR018368 ClpA/B, conserved site 1 Thivi_1253 IPR003593 AAA+ ATPase domain Thivi_1253 IPR001270 ClpA/B family Thivi_1253 IPR028299 ClpA/B, conserved site 2 Thivi_1253 IPR041546 ClpA/ClpB, AAA lid domain Thivi_1255 IPR000847 Transcription regulator HTH, LysR Thivi_1255 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1255 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1255 IPR005119 LysR, substrate-binding Thivi_1257 IPR005330 MHYT domain Thivi_1257 IPR029787 Nucleotide cyclase Thivi_1257 IPR001633 EAL domain Thivi_1257 IPR035919 EAL domain superfamily Thivi_1257 IPR000160 GGDEF domain Thivi_1258 IPR016166 FAD-binding domain, PCMH-type Thivi_1258 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_1258 IPR004490 Glycolate oxidase subunit GlcD Thivi_1258 IPR006094 FAD linked oxidase, N-terminal Thivi_1258 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_1258 IPR016164 FAD-linked oxidase-like, C-terminal Thivi_1258 IPR004113 FAD-linked oxidase, C-terminal Thivi_1259 IPR035919 EAL domain superfamily Thivi_1259 IPR029787 Nucleotide cyclase Thivi_1259 IPR005330 MHYT domain Thivi_1259 IPR001633 EAL domain Thivi_1259 IPR000160 GGDEF domain Thivi_1262 IPR005911 Protein YhcC-like Thivi_1262 IPR007197 Radical SAM Thivi_1262 IPR032432 Radical SAM, C-terminal extension Thivi_1262 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1262 IPR006638 Elp3/MiaB/NifB Thivi_1262 IPR039661 ELP3/YhcC Thivi_1268 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1268 IPR016450 Uncharacterised conserved protein UCP005522 Thivi_1274 IPR001789 Signal transduction response regulator, receiver domain Thivi_1274 IPR000160 GGDEF domain Thivi_1274 IPR029787 Nucleotide cyclase Thivi_1274 IPR011006 CheY-like superfamily Thivi_1276 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal Thivi_1276 IPR014438 Glucan biosynthesis protein MdoG/MdoD Thivi_1276 IPR011013 Galactose mutarotase-like domain superfamily Thivi_1276 IPR014718 Glycoside hydrolase-type carbohydrate-binding Thivi_1276 IPR013783 Immunoglobulin-like fold Thivi_1276 IPR023704 Glucan biosynthesis protein G Thivi_1276 IPR014756 Immunoglobulin E-set Thivi_1280 IPR006008 Intracellular septation protein A Thivi_1281 IPR005545 YCII-related Thivi_1281 IPR011008 Dimeric alpha-beta barrel Thivi_1282 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thivi_1282 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thivi_1284 IPR036280 Multiheme cytochrome superfamily Thivi_1284 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_1284 IPR038266 NapC/NirT cytochrome c superfamily Thivi_1284 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK Thivi_1284 IPR011031 Multihaem cytochrome Thivi_1295 IPR002686 Transposase IS200-like Thivi_1295 IPR036515 Transposase IS200-like superfamily Thivi_1303 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_1303 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thivi_1303 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_1306 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_1306 IPR001821 [NiFe]-hydrogenase, small subunit Thivi_1306 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_1306 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_1306 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_1306 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_1306 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_1308 IPR002559 Transposase, IS4-like Thivi_1308 IPR032806 H repeat-associated protein, N-terminal Thivi_1311 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Thivi_1311 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thivi_1311 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_1311 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thivi_1311 IPR012340 Nucleic acid-binding, OB-fold Thivi_1311 IPR002313 Lysine-tRNA ligase, class II Thivi_1313 IPR005330 MHYT domain Thivi_1313 IPR029787 Nucleotide cyclase Thivi_1313 IPR035919 EAL domain superfamily Thivi_1313 IPR001633 EAL domain Thivi_1313 IPR000160 GGDEF domain Thivi_1315 IPR036641 HPT domain superfamily Thivi_1315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1315 IPR001789 Signal transduction response regulator, receiver domain Thivi_1315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1315 IPR011006 CheY-like superfamily Thivi_1315 IPR003660 HAMP domain Thivi_1315 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1315 IPR005467 Histidine kinase domain Thivi_1315 IPR033414 Periplasmic sensor domain Thivi_1317 IPR039426 Vitamin B12 transporter BtuB-like Thivi_1317 IPR012910 TonB-dependent receptor, plug domain Thivi_1317 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_1317 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_1317 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_1317 IPR010917 TonB-dependent receptor, conserved site Thivi_1317 IPR010916 TonB box, conserved site Thivi_1318 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Thivi_1318 IPR001633 EAL domain Thivi_1318 IPR035919 EAL domain superfamily Thivi_1318 IPR013976 Metal-dependent hydrolase HDOD Thivi_1319 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1319 IPR036641 HPT domain superfamily Thivi_1319 IPR019247 Histidine kinase BarA, N-terminal Thivi_1319 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1319 IPR005467 Histidine kinase domain Thivi_1319 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1319 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1319 IPR003660 HAMP domain Thivi_1319 IPR011006 CheY-like superfamily Thivi_1319 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1319 IPR001789 Signal transduction response regulator, receiver domain Thivi_1319 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1320 IPR036641 HPT domain superfamily Thivi_1320 IPR019247 Histidine kinase BarA, N-terminal Thivi_1320 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1320 IPR001789 Signal transduction response regulator, receiver domain Thivi_1320 IPR003660 HAMP domain Thivi_1320 IPR005467 Histidine kinase domain Thivi_1320 IPR011006 CheY-like superfamily Thivi_1320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1320 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1321 IPR000160 GGDEF domain Thivi_1321 IPR035919 EAL domain superfamily Thivi_1321 IPR001633 EAL domain Thivi_1321 IPR029787 Nucleotide cyclase Thivi_1321 IPR005330 MHYT domain Thivi_1323 IPR029787 Nucleotide cyclase Thivi_1323 IPR000160 GGDEF domain Thivi_1323 IPR035919 EAL domain superfamily Thivi_1323 IPR013656 PAS fold-4 Thivi_1323 IPR000014 PAS domain Thivi_1323 IPR035965 PAS domain superfamily Thivi_1323 IPR001633 EAL domain Thivi_1324 IPR000125 Glycoside hydrolase, family 14A, bacterial Thivi_1324 IPR017853 Glycoside hydrolase superfamily Thivi_1324 IPR013780 Glycosyl hydrolase, all-beta Thivi_1324 IPR013783 Immunoglobulin-like fold Thivi_1324 IPR018238 Glycoside hydrolase, family 14, conserved site Thivi_1324 IPR001554 Glycoside hydrolase, family 14 Thivi_1324 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_1324 IPR005085 Carbohydrate binding module family 25 Thivi_1324 IPR031319 Alpha-amylase, C-terminal domain Thivi_1325 IPR002142 Peptidase S49 Thivi_1325 IPR029045 ClpP/crotonase-like domain superfamily Thivi_1325 IPR013703 Peptidase S49, N-terminal proteobacteria Thivi_1326 IPR011057 Mss4-like superfamily Thivi_1326 IPR002579 Peptide methionine sulphoxide reductase MrsB Thivi_1326 IPR028427 Peptide methionine sulfoxide reductase Thivi_1328 IPR033177 Phosphatidylserine decarboxylase Thivi_1328 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 Thivi_1328 IPR003817 Phosphatidylserine decarboxylase-related Thivi_1329 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Thivi_1329 IPR007197 Radical SAM Thivi_1329 IPR013785 Aldolase-type TIM barrel Thivi_1329 IPR010505 Molybdenum cofactor synthesis C-terminal Thivi_1329 IPR006638 Elp3/MiaB/NifB Thivi_1329 IPR013483 Molybdenum cofactor biosynthesis protein A Thivi_1331 IPR003607 HD/PDEase domain Thivi_1331 IPR011006 CheY-like superfamily Thivi_1331 IPR037522 HD-GYP domain Thivi_1331 IPR001789 Signal transduction response regulator, receiver domain Thivi_1332 IPR023214 HAD superfamily Thivi_1332 IPR036412 HAD-like superfamily Thivi_1332 IPR008250 P-type ATPase, A domain superfamily Thivi_1332 IPR023298 P-type ATPase, transmembrane domain superfamily Thivi_1332 IPR018303 P-type ATPase, phosphorylation site Thivi_1332 IPR023299 P-type ATPase, cytoplasmic domain N Thivi_1332 IPR027256 P-type ATPase, subfamily IB Thivi_1332 IPR001757 P-type ATPase Thivi_1337 IPR006059 Bacterial extracellular solute-binding protein Thivi_1337 IPR026045 Ferric binding protein Thivi_1339 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1339 IPR041230 FbpC, C-terminal regulatory nucleotide binding domain Thivi_1339 IPR015853 ABC transporter, ferric cation import, FbpC Thivi_1339 IPR017871 ABC transporter, conserved site Thivi_1339 IPR003439 ABC transporter-like Thivi_1339 IPR003593 AAA+ ATPase domain Thivi_1340 IPR006120 Resolvase, HTH domain Thivi_1340 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Thivi_1340 IPR006119 Resolvase, N-terminal catalytic domain Thivi_1340 IPR006118 Recombinase, conserved site Thivi_1355 IPR002549 Transmembrane protein TqsA-like Thivi_1357 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_1357 IPR012136 NADP transhydrogenase, beta subunit Thivi_1357 IPR034300 NADP transhydrogenase beta-like domain Thivi_1358 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal Thivi_1359 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Thivi_1359 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Thivi_1359 IPR036291 NAD(P)-binding domain superfamily Thivi_1359 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 Thivi_1359 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 Thivi_1360 IPR005177 Bifunctional kinase-pyrophosphorylase Thivi_1360 IPR026530 Phosphoenolpyruvate synthase regulatory protein Thivi_1361 IPR002081 Cryptochrome/DNA photolyase class 1 Thivi_1361 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Thivi_1361 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Thivi_1361 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Thivi_1361 IPR006050 DNA photolyase, N-terminal Thivi_1361 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Thivi_1361 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1363 IPR005330 MHYT domain Thivi_1363 IPR000160 GGDEF domain Thivi_1363 IPR035919 EAL domain superfamily Thivi_1363 IPR001633 EAL domain Thivi_1363 IPR029787 Nucleotide cyclase Thivi_1364 IPR003824 Undecaprenyl-diphosphatase UppP Thivi_1365 IPR005358 Putative zinc- or iron-chelating domain containing protein Thivi_1365 IPR008228 Uncharacterised conserved protein UCP006173 Thivi_1367 IPR038770 Sodium/solute symporter superfamily Thivi_1367 IPR018422 Cation/H+ exchanger, CPA1 family Thivi_1367 IPR006153 Cation/H+ exchanger Thivi_1368 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS Thivi_1368 IPR024370 PBP domain Thivi_1371 IPR003474 Gluconate transporter Thivi_1372 IPR003187 Phospholipase A1 Thivi_1372 IPR036541 Phospholipase A1 superfamily Thivi_1378 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Thivi_1378 IPR003918 NADH:ubiquinone oxidoreductase Thivi_1378 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_1379 IPR039420 Transcriptional regulatory protein WalR-like Thivi_1379 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_1379 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_1379 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_1379 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1379 IPR040970 CadC C-terminal domain 1 Thivi_1383 IPR000160 GGDEF domain Thivi_1383 IPR029787 Nucleotide cyclase Thivi_1383 IPR000014 PAS domain Thivi_1383 IPR035965 PAS domain superfamily Thivi_1383 IPR013656 PAS fold-4 Thivi_1383 IPR035919 EAL domain superfamily Thivi_1383 IPR001633 EAL domain Thivi_1388 IPR036527 SCP2 sterol-binding domain superfamily Thivi_1388 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1388 IPR001279 Metallo-beta-lactamase Thivi_1388 IPR029228 Alkyl sulfatase dimerisation domain Thivi_1388 IPR029229 Alkyl sulfatase, C-terminal Thivi_1388 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily Thivi_1391 IPR022461 Arginine/ornithine antiporter Thivi_1391 IPR002293 Amino acid/polyamine transporter I Thivi_1391 IPR004754 Amino acid antiporter Thivi_1392 IPR003876 Arginine deiminase Thivi_1396 IPR006143 RND efflux pump, membrane fusion protein Thivi_1396 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_1397 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1397 IPR001036 Acriflavin resistance protein Thivi_1399 IPR002549 Transmembrane protein TqsA-like Thivi_1401 IPR004445 Sodium/glutamate symport carrier protein GltS Thivi_1403 IPR015868 Glutaminase Thivi_1403 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1404 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1404 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1404 IPR005119 LysR, substrate-binding Thivi_1404 IPR000847 Transcription regulator HTH, LysR Thivi_1405 IPR017927 FAD-binding domain, ferredoxin reductase-type Thivi_1405 IPR001094 Flavodoxin-like Thivi_1405 IPR008254 Flavodoxin/nitric oxide synthase Thivi_1405 IPR029039 Flavoprotein-like superfamily Thivi_1405 IPR017938 Riboflavin synthase-like beta-barrel Thivi_1405 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Thivi_1405 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thivi_1405 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily Thivi_1405 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain Thivi_1405 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria Thivi_1405 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_1405 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding Thivi_1406 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Thivi_1406 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit Thivi_1406 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site Thivi_1406 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Thivi_1406 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily Thivi_1407 IPR011800 Phosphoadenosine phosphosulphate reductase CysH Thivi_1407 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1407 IPR002500 Phosphoadenosine phosphosulphate reductase Thivi_1407 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase Thivi_1409 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_1409 IPR012951 Berberine/berberine-like Thivi_1409 IPR016167 FAD-binding, type PCMH, subdomain 1 Thivi_1409 IPR006094 FAD linked oxidase, N-terminal Thivi_1409 IPR016166 FAD-binding domain, PCMH-type Thivi_1411 IPR035243 TamA, POTRA domain 1 Thivi_1411 IPR039910 Surface antigen D15-like Thivi_1411 IPR000184 Bacterial surface antigen (D15) Thivi_1413 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1413 IPR010970 Cysteine desulfurase, SufS Thivi_1413 IPR000192 Aminotransferase class V domain Thivi_1413 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1413 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1415 IPR011788 Zn(II)-responsive transcriptional regulator Thivi_1415 IPR009061 Putative DNA-binding domain superfamily Thivi_1415 IPR000551 MerR-type HTH domain Thivi_1418 IPR002559 Transposase, IS4-like Thivi_1418 IPR032806 H repeat-associated protein, N-terminal Thivi_1421 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thivi_1421 IPR036291 NAD(P)-binding domain superfamily Thivi_1421 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_1421 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Thivi_1421 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Thivi_1422 IPR008978 HSP20-like chaperone Thivi_1422 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain Thivi_1422 IPR023728 Small heat shock protein IbpA Thivi_1422 IPR002068 Alpha crystallin/Hsp20 domain Thivi_1436 IPR039426 Vitamin B12 transporter BtuB-like Thivi_1436 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_1436 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_1436 IPR010916 TonB box, conserved site Thivi_1436 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_1436 IPR012910 TonB-dependent receptor, plug domain Thivi_1436 IPR010917 TonB-dependent receptor, conserved site Thivi_1437 IPR033414 Periplasmic sensor domain Thivi_1437 IPR011006 CheY-like superfamily Thivi_1437 IPR003660 HAMP domain Thivi_1437 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1437 IPR005467 Histidine kinase domain Thivi_1437 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1437 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1437 IPR001789 Signal transduction response regulator, receiver domain Thivi_1437 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1437 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1437 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1437 IPR036641 HPT domain superfamily Thivi_1440 IPR000792 Transcription regulator LuxR, C-terminal Thivi_1440 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_1440 IPR001789 Signal transduction response regulator, receiver domain Thivi_1440 IPR011006 CheY-like superfamily Thivi_1451 IPR010927 Type IV conjugative transfer system protein TraH Thivi_1460 IPR032806 H repeat-associated protein, N-terminal Thivi_1460 IPR002559 Transposase, IS4-like Thivi_1464 IPR010086 Flavodoxin, long chain Thivi_1464 IPR001094 Flavodoxin-like Thivi_1464 IPR029039 Flavoprotein-like superfamily Thivi_1464 IPR001226 Flavodoxin, conserved site Thivi_1464 IPR008254 Flavodoxin/nitric oxide synthase Thivi_1468 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1474 IPR033454 RecG, wedge domain Thivi_1474 IPR038475 RecG, C-terminal domain superfamily Thivi_1474 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Thivi_1474 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1474 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1474 IPR011545 DEAD/DEAH box helicase domain Thivi_1474 IPR012340 Nucleic acid-binding, OB-fold Thivi_1475 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1487 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1487 IPR011704 ATPase, dynein-related, AAA domain Thivi_1487 IPR006537 Cobaltochelatase subunit CobS Thivi_1487 IPR025865 Cobaltochelatase subunit CobS N-terminal domain Thivi_1490 IPR011344 Single-stranded DNA-binding protein Thivi_1490 IPR000424 Primosome PriB/single-strand DNA-binding Thivi_1490 IPR012340 Nucleic acid-binding, OB-fold Thivi_1496 IPR001460 Penicillin-binding protein, transpeptidase Thivi_1496 IPR002137 Beta-lactamase, class-D active site Thivi_1496 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1498 IPR009649 TraU Thivi_1500 IPR019756 Peptidase S26A, signal peptidase I, serine active site Thivi_1500 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Thivi_1500 IPR019758 Peptidase S26A, signal peptidase I, conserved site Thivi_1500 IPR000223 Peptidase S26A, signal peptidase I Thivi_1500 IPR036286 LexA/Signal peptidase-like superfamily Thivi_1500 IPR019533 Peptidase S26 Thivi_1506 IPR037196 HSP90, C-terminal domain Thivi_1506 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1506 IPR001404 Heat shock protein Hsp90 family Thivi_1506 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_1506 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_1513 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1513 IPR009614 Toxin YoeB Thivi_1523 IPR036291 NAD(P)-binding domain superfamily Thivi_1523 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Thivi_1523 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Thivi_1523 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_1523 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thivi_1542 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1542 IPR004473 Restriction endonuclease, type I, HsdR Thivi_1542 IPR040980 SWI2/SNF2 ATPase Thivi_1542 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1542 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Thivi_1542 IPR021810 Protein of unknown function DUF3387 Thivi_1547 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_1547 IPR004546 Restriction endonuclease, type I, HsdM Thivi_1547 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1547 IPR003356 DNA methylase, adenine-specific Thivi_1547 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_1547 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_1552 IPR006171 TOPRIM domain Thivi_1552 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain Thivi_1552 IPR041459 Polyvalent protein, metallopeptidase domain Thivi_1552 IPR013610 Domain of unknown function DUF1738 Thivi_1558 IPR009061 Putative DNA-binding domain superfamily Thivi_1558 IPR000551 MerR-type HTH domain Thivi_1559 IPR000119 Histone-like DNA-binding protein Thivi_1559 IPR020816 Histone-like DNA-binding protein, conserved site Thivi_1559 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Thivi_1559 IPR005684 Integration host factor, alpha subunit Thivi_1560 IPR012340 Nucleic acid-binding, OB-fold Thivi_1560 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily Thivi_1560 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Thivi_1560 IPR005121 Ferrodoxin-fold anticodon-binding domain Thivi_1560 IPR009061 Putative DNA-binding domain superfamily Thivi_1560 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Thivi_1560 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain Thivi_1560 IPR005147 tRNA synthetase, B5-domain Thivi_1560 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain Thivi_1560 IPR002547 tRNA-binding domain Thivi_1560 IPR005146 B3/B4 tRNA-binding domain Thivi_1561 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Thivi_1561 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Thivi_1561 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Thivi_1561 IPR002319 Phenylalanyl-tRNA synthetase Thivi_1561 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Thivi_1561 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_1562 IPR005813 Ribosomal protein L20 Thivi_1562 IPR035566 Ribosomal protein L20, C-terminal Thivi_1563 IPR021137 Ribosomal protein L35 Thivi_1563 IPR037229 Ribosomal protein L35 superfamily Thivi_1563 IPR001706 Ribosomal protein L35, non-mitochondrial Thivi_1563 IPR018265 Ribosomal protein L35, conserved site Thivi_1564 IPR001288 Translation initiation factor 3 Thivi_1564 IPR019815 Translation initiation factor 3, C-terminal Thivi_1564 IPR019814 Translation initiation factor 3, N-terminal Thivi_1564 IPR019813 Translation initiation factor 3, conserved site Thivi_1564 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily Thivi_1564 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily Thivi_1565 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily Thivi_1565 IPR033728 Threonine-tRNA ligase catalytic core domain Thivi_1565 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) Thivi_1565 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_1565 IPR004095 TGS Thivi_1565 IPR036621 Anticodon-binding domain superfamily Thivi_1565 IPR004154 Anticodon-binding Thivi_1565 IPR012675 Beta-grasp domain superfamily Thivi_1565 IPR002320 Threonine-tRNA ligase, class IIa Thivi_1565 IPR012676 TGS-like Thivi_1565 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Thivi_1567 IPR001279 Metallo-beta-lactamase Thivi_1567 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Thivi_1567 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Thivi_1567 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1567 IPR017782 Hydroxyacylglutathione hydrolase Thivi_1568 IPR005474 Transketolase, N-terminal Thivi_1568 IPR033248 Transketolase, C-terminal domain Thivi_1568 IPR020826 Transketolase binding site Thivi_1568 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_1568 IPR005477 Deoxyxylulose-5-phosphate synthase Thivi_1568 IPR029061 Thiamin diphosphate-binding fold Thivi_1568 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_1569 IPR000847 Transcription regulator HTH, LysR Thivi_1569 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1569 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1569 IPR005119 LysR, substrate-binding Thivi_1570 IPR036422 RuBisCO large subunit, N-terminal domain superfamily Thivi_1570 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I Thivi_1570 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily Thivi_1570 IPR033966 RuBisCO Thivi_1570 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site Thivi_1570 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thivi_1570 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thivi_1571 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily Thivi_1571 IPR000894 Ribulose bisphosphate carboxylase small chain, domain Thivi_1572 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1572 IPR011704 ATPase, dynein-related, AAA domain Thivi_1572 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1574 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1574 IPR002035 von Willebrand factor, type A Thivi_1575 IPR041445 RuvB, AAA lid domain Thivi_1575 IPR008824 RuvB-like P-loop domain Thivi_1575 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1575 IPR008823 RuvB C-terminal winged helix domain Thivi_1575 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1575 IPR004605 DNA helicase, Holliday junction RuvB-type Thivi_1575 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1575 IPR003593 AAA+ ATPase domain Thivi_1576 IPR006094 FAD linked oxidase, N-terminal Thivi_1576 IPR004113 FAD-linked oxidase, C-terminal Thivi_1576 IPR004490 Glycolate oxidase subunit GlcD Thivi_1576 IPR016164 FAD-linked oxidase-like, C-terminal Thivi_1576 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_1576 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_1576 IPR016166 FAD-binding domain, PCMH-type Thivi_1598 IPR010927 Type IV conjugative transfer system protein TraH Thivi_1600 IPR011055 Duplicated hybrid motif Thivi_1600 IPR018392 LysM domain Thivi_1600 IPR013731 Opacity-associated protein A, N-terminal Thivi_1600 IPR016047 Peptidase M23 Thivi_1604 IPR011006 CheY-like superfamily Thivi_1604 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_1604 IPR001789 Signal transduction response regulator, receiver domain Thivi_1604 IPR000792 Transcription regulator LuxR, C-terminal Thivi_1610 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1610 IPR025865 Cobaltochelatase subunit CobS N-terminal domain Thivi_1610 IPR011704 ATPase, dynein-related, AAA domain Thivi_1610 IPR006537 Cobaltochelatase subunit CobS Thivi_1610 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1612 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1612 IPR009057 Homeobox-like domain superfamily Thivi_1612 IPR002514 Transposase IS3/IS911family Thivi_1616 IPR006118 Recombinase, conserved site Thivi_1616 IPR009057 Homeobox-like domain superfamily Thivi_1616 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Thivi_1616 IPR006119 Resolvase, N-terminal catalytic domain Thivi_1616 IPR006120 Resolvase, HTH domain Thivi_1624 IPR019772 Ferrochelatase, active site Thivi_1624 IPR033644 Ferrochelatase, C-terminal Thivi_1624 IPR033659 Ferrochelatase, N-terminal Thivi_1624 IPR001015 Ferrochelatase Thivi_1630 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Thivi_1630 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Thivi_1630 IPR011640 Ferrous iron transport protein B, C-terminal Thivi_1630 IPR041069 FeoB, cytosolic helical domain Thivi_1630 IPR003373 Ferrous iron transport protein B Thivi_1630 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1636 IPR011794 Hg(II)-responsive transcriptional regulator Thivi_1636 IPR000551 MerR-type HTH domain Thivi_1636 IPR009061 Putative DNA-binding domain superfamily Thivi_1637 IPR005881 Serine O-acetyltransferase Thivi_1637 IPR011004 Trimeric LpxA-like superfamily Thivi_1637 IPR042122 Serine acetyltransferase, N-terminal domain superfamily Thivi_1637 IPR001451 Hexapeptide repeat Thivi_1637 IPR018357 Hexapeptide transferase, conserved site Thivi_1640 IPR002559 Transposase, IS4-like Thivi_1640 IPR032806 H repeat-associated protein, N-terminal Thivi_1645 IPR000318 Nitrogenase component 1, conserved site Thivi_1645 IPR014280 Nitrogenase iron-iron, beta subunit Thivi_1645 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_1646 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1646 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1646 IPR022689 Iron dependent repressor Thivi_1646 IPR022687 DTXR-type HTH domain Thivi_1646 IPR038157 Ferrous iron transporter, core domain Thivi_1646 IPR001367 Iron dependent repressor, metal binding and dimerisation domain Thivi_1646 IPR007167 Ferrous iron transporter FeoA domain Thivi_1646 IPR040767 Diphteria toxin repressor, SH3 domain Thivi_1646 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily Thivi_1646 IPR008988 Transcriptional repressor, C-terminal Thivi_1656 IPR012340 Nucleic acid-binding, OB-fold Thivi_1656 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Thivi_1656 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1656 IPR004881 Ribosome biogenesis GTPase RsgA Thivi_1656 IPR010914 RsgA GTPase domain Thivi_1658 IPR032806 H repeat-associated protein, N-terminal Thivi_1658 IPR002559 Transposase, IS4-like Thivi_1660 IPR000477 Reverse transcriptase domain Thivi_1660 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA Thivi_1666 IPR018334 ArsR-type transcription regulator, HTH motif Thivi_1666 IPR001845 HTH ArsR-type DNA-binding domain Thivi_1666 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1666 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1666 IPR011991 ArsR-like helix-turn-helix domain Thivi_1667 IPR014064 Arsenate reductase ArsC Thivi_1667 IPR036196 Phosphotyrosine protein phosphatase I superfamily Thivi_1667 IPR023485 Phosphotyrosine protein phosphatase I Thivi_1668 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 Thivi_1668 IPR004706 Arsenical-resistance protein Acr3 Thivi_1668 IPR038770 Sodium/solute symporter superfamily Thivi_1669 IPR033752 MetA family Thivi_1669 IPR029062 Class I glutamine amidotransferase-like Thivi_1672 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Thivi_1672 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Thivi_1672 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily Thivi_1672 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Thivi_1675 IPR004485 Cobalamin biosynthesis CobD/CbiB Thivi_1677 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase Thivi_1677 IPR014776 Tetrapyrrole methylase, subdomain 2 Thivi_1677 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_1677 IPR000878 Tetrapyrrole methylase Thivi_1677 IPR035996 Tetrapyrrole methylase superfamily Thivi_1677 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Thivi_1679 IPR036197 NarG-like superfamily Thivi_1679 IPR012830 Citrate utilization protein B Thivi_1680 IPR003723 Precorrin-6x reductase Thivi_1681 IPR035996 Tetrapyrrole methylase superfamily Thivi_1681 IPR000878 Tetrapyrrole methylase Thivi_1681 IPR006363 Precorrin-3B C17-methyltransferase domain Thivi_1681 IPR014776 Tetrapyrrole methylase, subdomain 2 Thivi_1681 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_1682 IPR035996 Tetrapyrrole methylase superfamily Thivi_1682 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_1682 IPR014776 Tetrapyrrole methylase, subdomain 2 Thivi_1682 IPR012382 Precorrin-2 C(20)-methyltransferase Thivi_1682 IPR006364 Precorrin-2 C(20)-methyltransferase domain Thivi_1682 IPR000878 Tetrapyrrole methylase Thivi_1683 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC Thivi_1683 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily Thivi_1684 IPR000878 Tetrapyrrole methylase Thivi_1684 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1684 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit Thivi_1684 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase Thivi_1684 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_1684 IPR035996 Tetrapyrrole methylase superfamily Thivi_1684 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase Thivi_1685 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1685 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1685 IPR000847 Transcription regulator HTH, LysR Thivi_1685 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain Thivi_1685 IPR005119 LysR, substrate-binding Thivi_1686 IPR038071 UROD/MetE-like superfamily Thivi_1686 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal Thivi_1686 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal Thivi_1686 IPR006276 Cobalamin-independent methionine synthase Thivi_1690 IPR009241 Toxin HigB-like Thivi_1692 IPR004778 Homoserine/Threonine efflux protein Thivi_1692 IPR001123 Amino acid exporter protein, LeuE-type Thivi_1696 IPR003828 Epoxyqueuosine reductase QueH Thivi_1697 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_1697 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1697 IPR011698 CobB/CobQ-like glutamine amidotransferase Thivi_1697 IPR029062 Class I glutamine amidotransferase-like Thivi_1697 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Thivi_1697 IPR017929 CobB/CobQ glutamine amidotransferase Thivi_1700 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1700 IPR015863 ABC transporter, hemin import, HmuV Thivi_1700 IPR003439 ABC transporter-like Thivi_1700 IPR003593 AAA+ ATPase domain Thivi_1701 IPR000522 ABC transporter, permease protein, BtuC-like Thivi_1701 IPR037294 ABC transporter, BtuC-like Thivi_1704 IPR036589 Homocysteine-binding domain superfamily Thivi_1704 IPR006158 Cobalamin (vitamin B12)-binding domain Thivi_1704 IPR011822 Cobalamin-dependent methionine synthase Thivi_1704 IPR036594 Methionine synthase domain Thivi_1704 IPR000489 Pterin-binding domain Thivi_1704 IPR033706 Methionine synthase, B12-binding domain Thivi_1704 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily Thivi_1704 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Thivi_1704 IPR011005 Dihydropteroate synthase-like Thivi_1704 IPR036724 Cobalamin-binding domain superfamily Thivi_1704 IPR003726 Homocysteine-binding domain Thivi_1704 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Thivi_1708 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1708 IPR004459 Cobyric acid synthase CobQ Thivi_1708 IPR011698 CobB/CobQ-like glutamine amidotransferase Thivi_1708 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 Thivi_1708 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_1708 IPR017929 CobB/CobQ glutamine amidotransferase Thivi_1708 IPR029062 Class I glutamine amidotransferase-like Thivi_1709 IPR007197 Radical SAM Thivi_1709 IPR034466 Methyltransferase, class B Thivi_1709 IPR006158 Cobalamin (vitamin B12)-binding domain Thivi_1709 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1709 IPR006638 Elp3/MiaB/NifB Thivi_1716 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1716 IPR025526 DsrC-like domain superfamily Thivi_1716 IPR042072 DsrC-like protein, C-terminal domain Thivi_1717 IPR005119 LysR, substrate-binding Thivi_1717 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1717 IPR000847 Transcription regulator HTH, LysR Thivi_1717 IPR020890 Transcription regulator HTH, HdfR Thivi_1717 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1718 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_1718 IPR001789 Signal transduction response regulator, receiver domain Thivi_1718 IPR039420 Transcriptional regulatory protein WalR-like Thivi_1718 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1718 IPR011006 CheY-like superfamily Thivi_1719 IPR001789 Signal transduction response regulator, receiver domain Thivi_1719 IPR011006 CheY-like superfamily Thivi_1719 IPR003607 HD/PDEase domain Thivi_1719 IPR037522 HD-GYP domain Thivi_1720 IPR003660 HAMP domain Thivi_1720 IPR001789 Signal transduction response regulator, receiver domain Thivi_1720 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1720 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1720 IPR036641 HPT domain superfamily Thivi_1720 IPR019247 Histidine kinase BarA, N-terminal Thivi_1720 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1720 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1720 IPR005467 Histidine kinase domain Thivi_1720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1720 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1720 IPR011006 CheY-like superfamily Thivi_1722 IPR013785 Aldolase-type TIM barrel Thivi_1722 IPR000644 CBS domain Thivi_1722 IPR005990 Inosine-5'-monophosphate dehydrogenase Thivi_1722 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Thivi_1722 IPR001093 IMP dehydrogenase/GMP reductase Thivi_1723 IPR012156 Cold shock, CspA Thivi_1723 IPR019844 Cold-shock (CSD) domain Thivi_1723 IPR002059 Cold-shock protein, DNA-binding Thivi_1723 IPR012340 Nucleic acid-binding, OB-fold Thivi_1723 IPR011129 Cold shock domain Thivi_1724 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1724 IPR032781 ABC-transporter extension domain Thivi_1724 IPR003593 AAA+ ATPase domain Thivi_1724 IPR003439 ABC transporter-like Thivi_1725 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1725 IPR023753 FAD/NAD(P)-binding domain Thivi_1725 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_1725 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_1725 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thivi_1725 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily Thivi_1725 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_1726 IPR009056 Cytochrome c-like domain Thivi_1726 IPR036909 Cytochrome c-like domain superfamily Thivi_1729 IPR019794 Peroxidase, active site Thivi_1729 IPR010255 Haem peroxidase superfamily Thivi_1729 IPR002016 Haem peroxidase Thivi_1729 IPR000763 Catalase-peroxidase haem Thivi_1730 IPR010232 Probable protein kinase UbiB Thivi_1730 IPR004147 UbiB domain Thivi_1730 IPR011009 Protein kinase-like domain superfamily Thivi_1732 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1732 IPR004033 UbiE/COQ5 methyltransferase Thivi_1732 IPR023576 UbiE/COQ5 methyltransferase, conserved site Thivi_1735 IPR003959 ATPase, AAA-type, core Thivi_1735 IPR004491 Heat shock protein HslU Thivi_1735 IPR019489 Clp ATPase, C-terminal Thivi_1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1735 IPR003593 AAA+ ATPase domain Thivi_1736 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1736 IPR022281 ATP-dependent protease, HslV subunit Thivi_1736 IPR001353 Proteasome, subunit alpha/beta Thivi_1736 IPR023333 Proteasome B-type subunit Thivi_1738 IPR002716 PIN domain Thivi_1738 IPR022907 VapC family Thivi_1738 IPR029060 PIN-like domain superfamily Thivi_1740 IPR017932 Glutamine amidotransferase type 2 domain Thivi_1740 IPR033738 Asparagine synthase, N-terminal domain Thivi_1740 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thivi_1740 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1740 IPR001962 Asparagine synthase Thivi_1743 IPR011006 CheY-like superfamily Thivi_1743 IPR003660 HAMP domain Thivi_1743 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1743 IPR019247 Histidine kinase BarA, N-terminal Thivi_1743 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1743 IPR005467 Histidine kinase domain Thivi_1743 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1743 IPR036641 HPT domain superfamily Thivi_1743 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1743 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1743 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1743 IPR001789 Signal transduction response regulator, receiver domain Thivi_1747 IPR038770 Sodium/solute symporter superfamily Thivi_1747 IPR006036 Potassium uptake protein TrkA Thivi_1747 IPR036291 NAD(P)-binding domain superfamily Thivi_1747 IPR003148 Regulator of K+ conductance, N-terminal Thivi_1747 IPR006153 Cation/H+ exchanger Thivi_1747 IPR004771 K+/H+ exchanger Thivi_1747 IPR023941 Glutathione-regulated potassium-efflux system protein KefC Thivi_1748 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1748 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Thivi_1749 IPR004193 Glycoside hydrolase, family 13, N-terminal Thivi_1749 IPR013783 Immunoglobulin-like fold Thivi_1749 IPR011837 Glycogen debranching enzyme, GlgX type Thivi_1749 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_1749 IPR013780 Glycosyl hydrolase, all-beta Thivi_1749 IPR014756 Immunoglobulin E-set Thivi_1749 IPR017853 Glycoside hydrolase superfamily Thivi_1750 IPR036259 MFS transporter superfamily Thivi_1750 IPR024989 Major facilitator superfamily associated domain Thivi_1750 IPR026032 Probable 3-phenylpropionic acid transporter Thivi_1751 IPR020541 Chorismate synthase, conserved site Thivi_1751 IPR035904 Chorismate synthase AroC superfamily Thivi_1751 IPR000453 Chorismate synthase Thivi_1752 IPR003423 Outer membrane efflux protein Thivi_1752 IPR010130 Type I secretion outer membrane protein, TolC Thivi_1753 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1753 IPR000952 AB hydrolase 4, conserved site Thivi_1753 IPR029058 Alpha/Beta hydrolase fold Thivi_1753 IPR012020 AB hydrolase 4 family Thivi_1754 IPR023561 Carbonic anhydrase, alpha-class Thivi_1754 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_1754 IPR018338 Carbonic anhydrase, alpha-class, conserved site Thivi_1754 IPR001148 Alpha carbonic anhydrase domain Thivi_1754 IPR041891 Carbonic anhydrase, prokaryotic-like Thivi_1755 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1755 IPR013482 Molybdenum cofactor guanylyltransferase Thivi_1755 IPR025877 MobA-like NTP transferase Thivi_1756 IPR002068 Alpha crystallin/Hsp20 domain Thivi_1756 IPR023728 Small heat shock protein IbpA Thivi_1756 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain Thivi_1756 IPR008978 HSP20-like chaperone Thivi_1757 IPR001633 EAL domain Thivi_1757 IPR029787 Nucleotide cyclase Thivi_1757 IPR005330 MHYT domain Thivi_1757 IPR035919 EAL domain superfamily Thivi_1757 IPR000160 GGDEF domain Thivi_1758 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1758 IPR007296 Domain of unknown function DUF403 Thivi_1761 IPR005222 Competence protein ComF Thivi_1761 IPR000836 Phosphoribosyltransferase domain Thivi_1761 IPR029057 Phosphoribosyltransferase-like Thivi_1762 IPR013785 Aldolase-type TIM barrel Thivi_1762 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Thivi_1762 IPR024177 Biotin synthase Thivi_1762 IPR010722 Biotin and thiamin synthesis-associated domain Thivi_1762 IPR007197 Radical SAM Thivi_1762 IPR006638 Elp3/MiaB/NifB Thivi_1763 IPR004839 Aminotransferase, class I/classII Thivi_1763 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Thivi_1763 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria Thivi_1763 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1763 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1763 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type Thivi_1763 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1764 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1764 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase Thivi_1764 IPR029058 Alpha/Beta hydrolase fold Thivi_1765 IPR013216 Methyltransferase type 11 Thivi_1765 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Thivi_1765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1766 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1766 IPR004472 Dethiobiotin synthase BioD Thivi_1768 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily Thivi_1768 IPR028624 Transcription elongation factor GreA/GreB Thivi_1768 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Thivi_1768 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily Thivi_1768 IPR006359 Transcription elongation factor GreA Thivi_1768 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Thivi_1768 IPR023459 Transcription elongation factor GreA/GreB family Thivi_1768 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Thivi_1769 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Thivi_1769 IPR011607 Methylglyoxal synthase-like domain Thivi_1769 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_1769 IPR011761 ATP-grasp fold Thivi_1769 IPR006275 Carbamoyl-phosphate synthase, large subunit Thivi_1769 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1769 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily Thivi_1769 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain Thivi_1769 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Thivi_1769 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thivi_1770 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain Thivi_1770 IPR029062 Class I glutamine amidotransferase-like Thivi_1770 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily Thivi_1770 IPR006274 Carbamoyl-phosphate synthase, small subunit Thivi_1770 IPR017926 Glutamine amidotransferase Thivi_1770 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain Thivi_1771 IPR012743 4-coumarate--CoA ligase Thivi_1771 IPR042099 AMP-dependent synthetase-like superfamily Thivi_1771 IPR000873 AMP-dependent synthetase/ligase Thivi_1771 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_1778 IPR002842 V-type ATPase subunit E Thivi_1778 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Thivi_1779 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Thivi_1779 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Thivi_1779 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Thivi_1779 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1779 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension Thivi_1779 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_1779 IPR022878 V-type ATP synthase catalytic alpha chain Thivi_1786 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1786 IPR022879 V-type ATP synthase regulatory subunit B/beta Thivi_1786 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thivi_1786 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_1788 IPR002699 ATPase, V1 complex, subunit D Thivi_1789 IPR017926 Glutamine amidotransferase Thivi_1789 IPR029062 Class I glutamine amidotransferase-like Thivi_1789 IPR010139 Imidazole glycerol phosphate synthase, subunit H Thivi_1791 IPR036737 OmpA-like domain superfamily Thivi_1791 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal Thivi_1791 IPR039001 Peptidoglycan-associated lipoprotein Thivi_1791 IPR006664 Outer membrane protein, bacterial Thivi_1791 IPR006665 OmpA-like domain Thivi_1791 IPR006690 Outer membrane protein, OmpA-like, conserved site Thivi_1792 IPR014167 Tol-Pal system protein TolB Thivi_1792 IPR007195 TolB, N-terminal Thivi_1792 IPR011042 Six-bladed beta-propeller, TolB-like Thivi_1792 IPR011659 WD40-like Beta Propeller Thivi_1792 IPR036752 TolB, N-terminal domain superfamily Thivi_1794 IPR014168 Tol-Pal system protein TolR Thivi_1794 IPR003400 Biopolymer transport protein ExbD/TolR Thivi_1795 IPR002898 MotA/TolQ/ExbB proton channel Thivi_1795 IPR014163 Tol-Pal system, TolQ Thivi_1796 IPR029069 HotDog domain superfamily Thivi_1796 IPR006683 Thioesterase domain Thivi_1796 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site Thivi_1796 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family Thivi_1796 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase Thivi_1799 IPR000873 AMP-dependent synthetase/ligase Thivi_1799 IPR042099 AMP-dependent synthetase-like superfamily Thivi_1803 IPR012347 Ferritin-like Thivi_1803 IPR009040 Ferritin-like diiron domain Thivi_1803 IPR009078 Ferritin-like superfamily Thivi_1803 IPR008331 Ferritin/DPS protein domain Thivi_1803 IPR041719 Ferritin, prokaryotic-type Thivi_1803 IPR001519 Ferritin Thivi_1804 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Thivi_1804 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 Thivi_1805 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B Thivi_1805 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal Thivi_1805 IPR023042 Peptidase M17, leucine aminopeptidase Thivi_1805 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal Thivi_1806 IPR005495 Permease LptG/LptF-related Thivi_1806 IPR030923 LPS export ABC transporter permease LptG Thivi_1807 IPR035985 Ubiquitin-activating enzyme Thivi_1807 IPR000594 THIF-type NAD/FAD binding fold Thivi_1808 IPR001130 TatD family Thivi_1808 IPR032466 Metal-dependent hydrolase Thivi_1808 IPR018228 Deoxyribonuclease, TatD-related, conserved site Thivi_1810 IPR018636 Protein of unknown function DUF2058 Thivi_1812 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1812 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_1812 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_1812 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thivi_1812 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily Thivi_1812 IPR023753 FAD/NAD(P)-binding domain Thivi_1812 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_1815 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_1815 IPR023753 FAD/NAD(P)-binding domain Thivi_1815 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_1815 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thivi_1815 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily Thivi_1815 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_1815 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1816 IPR009056 Cytochrome c-like domain Thivi_1816 IPR036909 Cytochrome c-like domain superfamily Thivi_1820 IPR017871 ABC transporter, conserved site Thivi_1820 IPR003593 AAA+ ATPase domain Thivi_1820 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1820 IPR003439 ABC transporter-like Thivi_1824 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1824 IPR001279 Metallo-beta-lactamase Thivi_1825 IPR004131 Pyrophosphate-energised proton pump Thivi_1826 IPR042159 Flavin-trafficking protein ApbE Thivi_1826 IPR024932 Flavin transferase ApbE Thivi_1826 IPR003374 ApbE-like superfamily Thivi_1828 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1828 IPR011009 Protein kinase-like domain superfamily Thivi_1830 IPR005330 MHYT domain Thivi_1830 IPR035919 EAL domain superfamily Thivi_1830 IPR001633 EAL domain Thivi_1830 IPR029787 Nucleotide cyclase Thivi_1830 IPR000160 GGDEF domain Thivi_1831 IPR005467 Histidine kinase domain Thivi_1831 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1831 IPR019247 Histidine kinase BarA, N-terminal Thivi_1831 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1831 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1831 IPR001789 Signal transduction response regulator, receiver domain Thivi_1831 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1831 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1831 IPR003660 HAMP domain Thivi_1831 IPR036641 HPT domain superfamily Thivi_1831 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1831 IPR011006 CheY-like superfamily Thivi_1832 IPR018517 tRNA-dihydrouridine synthase, conserved site Thivi_1832 IPR035587 DUS-like, FMN-binding domain Thivi_1832 IPR013785 Aldolase-type TIM barrel Thivi_1832 IPR004653 tRNA-dihydrouridine(20/20a) synthase Thivi_1832 IPR001269 tRNA-dihydrouridine synthase Thivi_1837 IPR022148 CopG antitoxin Thivi_1838 IPR006223 Glycine cleavage system T protein Thivi_1838 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Thivi_1838 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Thivi_1838 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Thivi_1838 IPR006222 Aminomethyltransferase, folate-binding domain Thivi_1838 IPR022903 Glycine cleavage system T protein, bacteria Thivi_1838 IPR028896 Aminomethyltransferase-like Thivi_1839 IPR011053 Single hybrid motif Thivi_1839 IPR017453 Glycine cleavage system H-protein, subgroup Thivi_1839 IPR033753 Glycine cleavage system H-protein/Simiate Thivi_1839 IPR002930 Glycine cleavage system H-protein Thivi_1839 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thivi_1839 IPR000089 Biotin/lipoyl attachment Thivi_1840 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1840 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 Thivi_1840 IPR020581 Glycine cleavage system P protein Thivi_1840 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1841 IPR018219 Thiol peroxidase conserved site Thivi_1841 IPR002065 Thiol peroxidase Tpx Thivi_1841 IPR013766 Thioredoxin domain Thivi_1841 IPR036249 Thioredoxin-like superfamily Thivi_1841 IPR013740 Redoxin Thivi_1842 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1842 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1842 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 Thivi_1842 IPR020581 Glycine cleavage system P protein Thivi_1842 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1843 IPR000829 DAGK family Thivi_1843 IPR033718 Diacylglycerol kinase, prokaryotic Thivi_1843 IPR036945 Diacylglycerol kinase (DAGK) superfamily Thivi_1844 IPR003325 TerD domain Thivi_1845 IPR041628 ChlI/MoxR, AAA lid domain Thivi_1845 IPR011776 Magnesium chelatase, ATPase subunit D Thivi_1845 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1845 IPR002035 von Willebrand factor, type A Thivi_1845 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1846 IPR011775 Magnesium chelatase, ATPase subunit I Thivi_1846 IPR003593 AAA+ ATPase domain Thivi_1846 IPR041628 ChlI/MoxR, AAA lid domain Thivi_1846 IPR000523 Magnesium chelatase ChlI domain Thivi_1846 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1847 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Thivi_1847 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal Thivi_1848 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1848 IPR007473 Ribosomal RNA large subunit methyltransferase J Thivi_1850 IPR005170 Transporter-associated domain Thivi_1850 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_1850 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_1850 IPR000644 CBS domain Thivi_1851 IPR002036 Endoribonuclease YbeY Thivi_1851 IPR020549 Endoribonuclease YbeY, conserved site Thivi_1851 IPR023091 Metalloprotease catalytic domain superfamily, predicted Thivi_1852 IPR003714 PhoH-like protein Thivi_1852 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1853 IPR007197 Radical SAM Thivi_1853 IPR005839 Methylthiotransferase Thivi_1853 IPR020612 Methylthiotransferase, conserved site Thivi_1853 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1853 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_1853 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB Thivi_1853 IPR002792 TRAM domain Thivi_1853 IPR013848 Methylthiotransferase, N-terminal Thivi_1853 IPR006638 Elp3/MiaB/NifB Thivi_1858 IPR012997 Rare lipoprotein A Thivi_1858 IPR036908 RlpA-like domain superfamily Thivi_1858 IPR034718 Endolytic peptidoglycan transglycosylase RlpA Thivi_1858 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_1859 IPR007428 MlaA lipoprotein Thivi_1863 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1863 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily Thivi_1863 IPR011006 CheY-like superfamily Thivi_1863 IPR001789 Signal transduction response regulator, receiver domain Thivi_1863 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1863 IPR005467 Histidine kinase domain Thivi_1863 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB Thivi_1863 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1863 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1863 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1863 IPR040642 Histidine kinase receptor ArcB, transmembrane domain Thivi_1863 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1863 IPR013767 PAS fold Thivi_1863 IPR035965 PAS domain superfamily Thivi_1863 IPR000700 PAS-associated, C-terminal Thivi_1863 IPR000014 PAS domain Thivi_1863 IPR036641 HPT domain superfamily Thivi_1865 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_1865 IPR036397 Ribonuclease H superfamily Thivi_1865 IPR005987 Ribonuclease T Thivi_1865 IPR012337 Ribonuclease H-like superfamily Thivi_1866 IPR033658 Glutaredoxin, PICOT-like Thivi_1866 IPR014434 Monothiol glutaredoxin Thivi_1866 IPR004480 Monothiol glutaredoxin-related Thivi_1866 IPR002109 Glutaredoxin Thivi_1866 IPR036249 Thioredoxin-like superfamily Thivi_1867 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1867 IPR017932 Glutamine amidotransferase type 2 domain Thivi_1867 IPR033738 Asparagine synthase, N-terminal domain Thivi_1867 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thivi_1867 IPR001962 Asparagine synthase Thivi_1868 IPR001189 Manganese/iron superoxide dismutase Thivi_1868 IPR019832 Manganese/iron superoxide dismutase, C-terminal Thivi_1868 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily Thivi_1868 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily Thivi_1868 IPR019833 Manganese/iron superoxide dismutase, binding site Thivi_1868 IPR019831 Manganese/iron superoxide dismutase, N-terminal Thivi_1869 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_1869 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_1869 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1869 IPR005814 Aminotransferase class-III Thivi_1869 IPR004636 Acetylornithine/Succinylornithine transaminase family Thivi_1870 IPR002292 Ornithine/putrescine carbamoyltransferase Thivi_1870 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Thivi_1870 IPR006130 Aspartate/ornithine carbamoyltransferase Thivi_1870 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Thivi_1870 IPR024904 Ornithine carbamoyltransferase Thivi_1870 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Thivi_1874 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain Thivi_1874 IPR011626 Alpha-macroglobulin-like, TED domain Thivi_1874 IPR021868 Alpha-2-macroglobulin MG3 domain Thivi_1874 IPR040639 Alpha-2-macroglobulin, MG1 domain Thivi_1874 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain Thivi_1874 IPR011625 Alpha-2-macroglobulin, bait region domain Thivi_1874 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain Thivi_1874 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Thivi_1874 IPR002890 Macroglobulin domain Thivi_1874 IPR026284 Alpha-2-macroglobulin, bacteria Thivi_1874 IPR001599 Alpha-2-macroglobulin Thivi_1878 IPR038377 Sodium/glucose symporter superfamily Thivi_1878 IPR018212 Sodium/solute symporter, conserved site Thivi_1878 IPR001734 Sodium/solute symporter Thivi_1878 IPR011849 Sodium/pantothenate symporter Thivi_1890 IPR009003 Peptidase S1, PA clan Thivi_1892 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Thivi_1892 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain Thivi_1892 IPR018136 Aconitase family, 4Fe-4S cluster binding site Thivi_1892 IPR006249 Aconitase/Iron-responsive element-binding protein 2 Thivi_1892 IPR036008 Aconitase, iron-sulfur domain Thivi_1892 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain Thivi_1892 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Thivi_1893 IPR000362 Fumarate lyase family Thivi_1893 IPR022761 Fumarate lyase, N-terminal Thivi_1893 IPR008948 L-Aspartase-like Thivi_1893 IPR004769 Adenylosuccinate lyase Thivi_1893 IPR013539 Adenylosuccinate lyase PurB, C-terminal Thivi_1893 IPR024083 Fumarase/histidase, N-terminal Thivi_1893 IPR020557 Fumarate lyase, conserved site Thivi_1894 IPR006690 Outer membrane protein, OmpA-like, conserved site Thivi_1894 IPR006665 OmpA-like domain Thivi_1894 IPR002368 Outer membrane protein, OmpA Thivi_1894 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Thivi_1894 IPR006664 Outer membrane protein, bacterial Thivi_1894 IPR036737 OmpA-like domain superfamily Thivi_1894 IPR000498 Outer membrane protein OmpA-like, transmembrane domain Thivi_1898 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1898 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA Thivi_1898 IPR001036 Acriflavin resistance protein Thivi_1899 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_1899 IPR006143 RND efflux pump, membrane fusion protein Thivi_1901 IPR036907 5'-Nucleotidase, C-terminal domain superfamily Thivi_1901 IPR006179 5'-Nucleotidase/apyrase Thivi_1901 IPR029052 Metallo-dependent phosphatase-like Thivi_1901 IPR011240 Phosphoesterase-related protein YunD Thivi_1901 IPR008334 5'-Nucleotidase, C-terminal Thivi_1903 IPR013815 ATP-grasp fold, subdomain 1 Thivi_1903 IPR008279 PEP-utilising enzyme, mobile domain Thivi_1903 IPR023151 PEP-utilising enzyme, conserved site Thivi_1903 IPR006319 Phosphoenolpyruvate synthase Thivi_1903 IPR036637 Phosphohistidine domain superfamily Thivi_1903 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Thivi_1903 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_1903 IPR018274 PEP-utilising enzyme, active site Thivi_1903 IPR040442 Pyruvate kinase-like domain superfamily Thivi_1903 IPR000121 PEP-utilising enzyme, C-terminal Thivi_1904 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Thivi_1904 IPR012336 Thioredoxin-like fold Thivi_1904 IPR036249 Thioredoxin-like superfamily Thivi_1904 IPR013766 Thioredoxin domain Thivi_1904 IPR017937 Thioredoxin, conserved site Thivi_1905 IPR037237 IlvD/EDD, N-terminal domain Thivi_1905 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Thivi_1905 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Thivi_1905 IPR004404 Dihydroxy-acid dehydratase Thivi_1905 IPR042096 Dihydroxy-acid dehydratase, C-terminal Thivi_1914 IPR002033 Sec-independent periplasmic protein translocase TatC Thivi_1914 IPR019820 Sec-independent periplasmic protein translocase, conserved site Thivi_1916 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase Thivi_1916 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Thivi_1917 IPR004780 Signal recognition particle protein Thivi_1917 IPR022941 Signal recognition particle, SRP54 subunit Thivi_1917 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Thivi_1917 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily Thivi_1917 IPR013822 Signal recognition particle SRP54, helical bundle Thivi_1917 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thivi_1917 IPR003593 AAA+ ATPase domain Thivi_1917 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Thivi_1917 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1918 IPR003557 Cytochrome c-type biogenesis protein CcmC Thivi_1918 IPR017562 Cytochrome c-type biogenesis protein CcsA Thivi_1918 IPR002541 Cytochrome c assembly protein Thivi_1920 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C Thivi_1920 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1921 IPR001478 PDZ domain Thivi_1921 IPR009003 Peptidase S1, PA clan Thivi_1921 IPR011782 Peptidase S1C, Do Thivi_1921 IPR036034 PDZ superfamily Thivi_1921 IPR001940 Peptidase S1C Thivi_1922 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_1925 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1925 IPR006083 Phosphoribulokinase/uridine kinase Thivi_1925 IPR006082 Phosphoribulokinase Thivi_1926 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_1926 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_1926 IPR001789 Signal transduction response regulator, receiver domain Thivi_1926 IPR036641 HPT domain superfamily Thivi_1926 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_1926 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_1926 IPR005467 Histidine kinase domain Thivi_1926 IPR019247 Histidine kinase BarA, N-terminal Thivi_1926 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1926 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1926 IPR003660 HAMP domain Thivi_1926 IPR011006 CheY-like superfamily Thivi_1928 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Thivi_1928 IPR035490 GlmS/FrlB, SIS domain 2 Thivi_1928 IPR017932 Glutamine amidotransferase type 2 domain Thivi_1928 IPR001347 Sugar isomerase (SIS) Thivi_1928 IPR035466 GlmS/AgaS, SIS domain 1 Thivi_1928 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1930 IPR003667 NqrDE/RnfAE Thivi_1930 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Thivi_1931 IPR007202 4Fe-4S domain Thivi_1931 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1931 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1931 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Thivi_1931 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Thivi_1932 IPR019554 Soluble ligand binding domain Thivi_1932 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_1932 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_1932 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Thivi_1932 IPR009051 Alpha-helical ferredoxin Thivi_1932 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1932 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1932 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_1934 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Thivi_1934 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Thivi_1935 IPR007329 FMN-binding Thivi_1935 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Thivi_1936 IPR003667 NqrDE/RnfAE Thivi_1936 IPR010968 Ion-translocating oxidoreductase complex subunit E Thivi_1937 IPR010129 Type I secretion membrane fusion protein, HlyD family Thivi_1937 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_1938 IPR035901 GIY-YIG endonuclease superfamily Thivi_1938 IPR000305 GIY-YIG endonuclease Thivi_1940 IPR003439 ABC transporter-like Thivi_1940 IPR010128 ATPase, type I secretion system, PrtD Thivi_1940 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_1940 IPR011527 ABC transporter type 1, transmembrane domain Thivi_1940 IPR003593 AAA+ ATPase domain Thivi_1940 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1940 IPR017871 ABC transporter, conserved site Thivi_1952 IPR002686 Transposase IS200-like Thivi_1952 IPR036515 Transposase IS200-like superfamily Thivi_1955 IPR004046 Glutathione S-transferase, C-terminal Thivi_1955 IPR036249 Thioredoxin-like superfamily Thivi_1955 IPR010987 Glutathione S-transferase, C-terminal-like Thivi_1955 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Thivi_1955 IPR004045 Glutathione S-transferase, N-terminal Thivi_1955 IPR034343 Uncharacterized GST-like protein YibF Thivi_1956 IPR014757 Transcription regulator IclR, C-terminal Thivi_1956 IPR005471 Transcription regulator IclR, N-terminal Thivi_1956 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1956 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1956 IPR029016 GAF-like domain superfamily Thivi_1961 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1961 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Thivi_1961 IPR041069 FeoB, cytosolic helical domain Thivi_1961 IPR011640 Ferrous iron transport protein B, C-terminal Thivi_1961 IPR003373 Ferrous iron transport protein B Thivi_1961 IPR030389 FeoB-type guanine nucleotide-binding (G) domain Thivi_1963 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1963 IPR017871 ABC transporter, conserved site Thivi_1963 IPR003439 ABC transporter-like Thivi_1963 IPR003593 AAA+ ATPase domain Thivi_1969 IPR000791 Acetate transporter GPR1/FUN34/SatP family Thivi_1972 IPR005135 Endonuclease/exonuclease/phosphatase Thivi_1972 IPR004808 AP endonuclease 1 Thivi_1972 IPR037493 Exodeoxyribonuclease III-like Thivi_1972 IPR020848 AP endonuclease 1, conserved site Thivi_1972 IPR020847 AP endonuclease 1, binding site Thivi_1972 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_1973 IPR036513 STAS domain superfamily Thivi_1973 IPR002645 STAS domain Thivi_1973 IPR001902 SLC26A/SulP transporter Thivi_1973 IPR011547 SLC26A/SulP transporter domain Thivi_1974 IPR005835 Nucleotidyl transferase domain Thivi_1974 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1978 IPR036259 MFS transporter superfamily Thivi_1978 IPR026036 PucC protein Thivi_1978 IPR004896 PucC-related Thivi_1980 IPR035889 Light-harvesting complex Thivi_1980 IPR002361 Antenna complex, alpha subunit conserved site Thivi_1980 IPR000066 Antenna complex, alpha/beta subunit Thivi_1980 IPR018332 Antenna complex, alpha subunit Thivi_1981 IPR035889 Light-harvesting complex Thivi_1981 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1981 IPR002362 Antenna complex, beta subunit Thivi_1981 IPR000066 Antenna complex, alpha/beta subunit Thivi_1983 IPR035889 Light-harvesting complex Thivi_1983 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1983 IPR000066 Antenna complex, alpha/beta subunit Thivi_1983 IPR002362 Antenna complex, beta subunit Thivi_1984 IPR018332 Antenna complex, alpha subunit Thivi_1984 IPR035889 Light-harvesting complex Thivi_1984 IPR000066 Antenna complex, alpha/beta subunit Thivi_1984 IPR002361 Antenna complex, alpha subunit conserved site Thivi_1985 IPR000066 Antenna complex, alpha/beta subunit Thivi_1985 IPR002362 Antenna complex, beta subunit Thivi_1985 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1985 IPR035889 Light-harvesting complex Thivi_1987 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1987 IPR000066 Antenna complex, alpha/beta subunit Thivi_1987 IPR002362 Antenna complex, beta subunit Thivi_1987 IPR035889 Light-harvesting complex Thivi_1990 IPR007197 Radical SAM Thivi_1990 IPR003698 Lipoyl synthase Thivi_1990 IPR031691 Lipoyl synthase, N-terminal Thivi_1990 IPR006638 Elp3/MiaB/NifB Thivi_1990 IPR013785 Aldolase-type TIM barrel Thivi_1991 IPR000086 NUDIX hydrolase domain Thivi_1991 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_1991 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 Thivi_1992 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thivi_1992 IPR036422 RuBisCO large subunit, N-terminal domain superfamily Thivi_1992 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily Thivi_1992 IPR033966 RuBisCO Thivi_1994 IPR018332 Antenna complex, alpha subunit Thivi_1994 IPR002361 Antenna complex, alpha subunit conserved site Thivi_1994 IPR035889 Light-harvesting complex Thivi_1994 IPR000066 Antenna complex, alpha/beta subunit Thivi_1995 IPR000066 Antenna complex, alpha/beta subunit Thivi_1995 IPR002362 Antenna complex, beta subunit Thivi_1995 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1995 IPR035889 Light-harvesting complex Thivi_1996 IPR002361 Antenna complex, alpha subunit conserved site Thivi_1996 IPR018332 Antenna complex, alpha subunit Thivi_1996 IPR035889 Light-harvesting complex Thivi_1996 IPR000066 Antenna complex, alpha/beta subunit Thivi_1997 IPR002362 Antenna complex, beta subunit Thivi_1997 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1997 IPR035889 Light-harvesting complex Thivi_1997 IPR000066 Antenna complex, alpha/beta subunit Thivi_1998 IPR011031 Multihaem cytochrome Thivi_1998 IPR023119 Multihaem cytochrome, PRC subunit superfamily Thivi_1998 IPR036280 Multiheme cytochrome superfamily Thivi_1998 IPR003158 Photosynthetic reaction centre, cytochrome c subunit Thivi_1999 IPR005781 Photosynthetic reaction centre, M subunit Thivi_1999 IPR000484 Photosynthetic reaction centre, L/M Thivi_1999 IPR036854 Photosystem II protein D1/D2 superfamily Thivi_2000 IPR036854 Photosystem II protein D1/D2 superfamily Thivi_2000 IPR000484 Photosynthetic reaction centre, L/M Thivi_2000 IPR005871 Photosynthetic reaction centre, L subunit Thivi_2001 IPR000066 Antenna complex, alpha/beta subunit Thivi_2001 IPR035889 Light-harvesting complex Thivi_2001 IPR018332 Antenna complex, alpha subunit Thivi_2001 IPR002361 Antenna complex, alpha subunit conserved site Thivi_2002 IPR002362 Antenna complex, beta subunit Thivi_2002 IPR000066 Antenna complex, alpha/beta subunit Thivi_2002 IPR023623 Antenna complex, beta subunit, conserved site Thivi_2002 IPR035889 Light-harvesting complex Thivi_2003 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2003 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Thivi_2003 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thivi_2003 IPR010244 Chlorophyllide reductase subunit Z Thivi_2010 IPR010245 Chlorophyllide reductase subunit Y Thivi_2010 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2010 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thivi_2011 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2011 IPR000392 NifH/frxC family Thivi_2011 IPR010246 Chlorophyllide reductase iron protein subunit X Thivi_2011 IPR030655 NifH/chlL conserved site Thivi_2012 IPR005903 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase Thivi_2012 IPR036291 NAD(P)-binding domain superfamily Thivi_2012 IPR011032 GroES-like superfamily Thivi_2013 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Thivi_2013 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2013 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2013 IPR016461 O-methyltransferase COMT-type Thivi_2013 IPR001077 O-methyltransferase domain Thivi_2014 IPR008949 Isoprenoid synthase domain superfamily Thivi_2014 IPR000092 Polyprenyl synthetase Thivi_2014 IPR033749 Polyprenyl synthetase, conserved site Thivi_2015 IPR002937 Amine oxidase Thivi_2015 IPR014105 Carotenoid/retinoid oxidoreductase Thivi_2015 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2019 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_2019 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 IPR036291 NAD(P)-binding domain superfamily Thivi_2020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2020 IPR020803 Polyketide synthase, methyltransferase domain Thivi_2020 IPR013216 Methyltransferase type 11 Thivi_2022 IPR011009 Protein kinase-like domain superfamily Thivi_2022 IPR000719 Protein kinase domain Thivi_2022 IPR004147 UbiB domain Thivi_2023 IPR004276 Glycosyltransferase family 28, N-terminal domain Thivi_2023 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase Thivi_2024 IPR008949 Isoprenoid synthase domain superfamily Thivi_2024 IPR002060 Squalene/phytoene synthase Thivi_2024 IPR019845 Squalene/phytoene synthase, conserved site Thivi_2024 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head Thivi_2025 IPR014105 Carotenoid/retinoid oxidoreductase Thivi_2025 IPR002937 Amine oxidase Thivi_2025 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site Thivi_2025 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2026 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2026 IPR005502 ADP-ribosylation/Crystallin J1 Thivi_2027 IPR006344 RecBCD enzyme subunit RecD Thivi_2027 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain Thivi_2027 IPR027785 UvrD-like helicase C-terminal domain Thivi_2027 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2027 IPR003593 AAA+ ATPase domain Thivi_2028 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Thivi_2028 IPR034739 UvrD/AddA helicase, N-terminal Thivi_2028 IPR014017 UvrD-like DNA helicase, C-terminal Thivi_2028 IPR014016 UvrD-like helicase, ATP-binding domain Thivi_2028 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2028 IPR004586 RecBCD enzyme subunit RecB Thivi_2028 IPR000212 DNA helicase, UvrD/REP type Thivi_2028 IPR011335 Restriction endonuclease type II-like Thivi_2028 IPR011604 Exonuclease, phage-type/RecB, C-terminal Thivi_2029 IPR041500 RecC, C-terminal Thivi_2029 IPR013986 DExx box DNA helicase domain superfamily Thivi_2029 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2029 IPR006697 RecBCD enzyme subunit RecC Thivi_2029 IPR011335 Restriction endonuclease type II-like Thivi_2030 IPR012547 PD-(D/E)XK nuclease superfamily 9 Thivi_2030 IPR018631 AAA-ATPase-like domain Thivi_2031 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_2031 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2031 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_2031 IPR011545 DEAD/DEAH box helicase domain Thivi_2031 IPR028621 ATP-dependent RNA helicase SrmB Thivi_2031 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2031 IPR001650 Helicase, C-terminal Thivi_2032 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2032 IPR025714 Methyltransferase domain Thivi_2032 IPR026669 Arsenite methyltransferase-like Thivi_2037 IPR036457 PPM-type phosphatase domain superfamily Thivi_2037 IPR001932 PPM-type phosphatase domain Thivi_2037 IPR015655 Protein phosphatase 2C family Thivi_2038 IPR008984 SMAD/FHA domain superfamily Thivi_2038 IPR000253 Forkhead-associated (FHA) domain Thivi_2038 IPR032030 YscD, cytoplasmic domain Thivi_2047 IPR002559 Transposase, IS4-like Thivi_2047 IPR032806 H repeat-associated protein, N-terminal Thivi_2049 IPR008271 Serine/threonine-protein kinase, active site Thivi_2049 IPR011009 Protein kinase-like domain superfamily Thivi_2049 IPR005543 PASTA domain Thivi_2049 IPR000719 Protein kinase domain Thivi_2049 IPR017441 Protein kinase, ATP binding site Thivi_2054 IPR015655 Protein phosphatase 2C family Thivi_2054 IPR001932 PPM-type phosphatase domain Thivi_2054 IPR036457 PPM-type phosphatase domain superfamily Thivi_2063 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2063 IPR024163 Aerotolerance regulator, N-terminal Thivi_2063 IPR022933 Uncharacterised protein family UPF0353 Thivi_2063 IPR002035 von Willebrand factor, type A Thivi_2064 IPR002035 von Willebrand factor, type A Thivi_2064 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2064 IPR033881 von Willebrand factor domain BatA-type Thivi_2066 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2066 IPR002881 Domain of unknown function DUF58 Thivi_2067 IPR036515 Transposase IS200-like superfamily Thivi_2067 IPR002686 Transposase IS200-like Thivi_2069 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2069 IPR011703 ATPase, AAA-3 Thivi_2069 IPR041628 ChlI/MoxR, AAA lid domain Thivi_2071 IPR002410 Peptidase S33 Thivi_2071 IPR005944 Proline iminopeptidase Thivi_2071 IPR029058 Alpha/Beta hydrolase fold Thivi_2071 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2072 IPR003732 D-aminoacyl-tRNA deacylase DTD Thivi_2072 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Thivi_2079 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Thivi_2079 IPR015803 Cysteine-tRNA ligase Thivi_2079 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2079 IPR032678 tRNA synthetases class I, catalytic domain Thivi_2079 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_2079 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Thivi_2080 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Thivi_2080 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2080 IPR004400 Urease accessory protein UreG Thivi_2081 IPR038277 UreF domain superfamily Thivi_2081 IPR002639 Urease accessory protein UreF Thivi_2082 IPR036118 UreE urease accessory, N-terminal domain superfamily Thivi_2082 IPR036675 UreE, C-terminal domain superfamily Thivi_2082 IPR007864 Urease accessory protein UreE, C-terminal domain Thivi_2082 IPR012406 Urease accessory protein UreE Thivi_2082 IPR004029 UreE urease accessory, N-terminal Thivi_2083 IPR005848 Urease, alpha subunit Thivi_2083 IPR006680 Amidohydrolase-related Thivi_2083 IPR011059 Metal-dependent hydrolase, composite domain superfamily Thivi_2083 IPR017951 Urease alpha subunit, C-terminal Thivi_2083 IPR029754 Urease nickel binding site Thivi_2083 IPR017950 Urease active site Thivi_2083 IPR032466 Metal-dependent hydrolase Thivi_2083 IPR011612 Urease alpha-subunit, N-terminal domain Thivi_2084 IPR002019 Urease, beta subunit Thivi_2084 IPR036461 Urease, beta subunit superfamily Thivi_2085 IPR002026 Urease, gamma/gamma-beta subunit Thivi_2085 IPR012010 Urease, gamma subunit Thivi_2085 IPR036463 Urease, gamma subunit superfamily Thivi_2086 IPR002669 Urease accessory protein UreD Thivi_2087 IPR017871 ABC transporter, conserved site Thivi_2087 IPR003439 ABC transporter-like Thivi_2087 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein Thivi_2087 IPR003593 AAA+ ATPase domain Thivi_2087 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2089 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Thivi_2089 IPR003593 AAA+ ATPase domain Thivi_2089 IPR003439 ABC transporter-like Thivi_2089 IPR017871 ABC transporter, conserved site Thivi_2089 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2091 IPR001851 ABC transporter, permease Thivi_2093 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Thivi_2093 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Thivi_2093 IPR029000 Cyclophilin-like domain superfamily Thivi_2093 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Thivi_2094 IPR023030 Bifunctional protein HldE Thivi_2094 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thivi_2094 IPR004821 Cytidyltransferase-like domain Thivi_2094 IPR011611 Carbohydrate kinase PfkB Thivi_2094 IPR011913 RfaE bifunctional protein, domain I Thivi_2094 IPR011914 RfaE bifunctional protein, domain II Thivi_2094 IPR029056 Ribokinase-like Thivi_2094 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2100 IPR004090 Chemotaxis methyl-accepting receptor Thivi_2100 IPR003660 HAMP domain Thivi_2100 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_2100 IPR033480 Single Cache domain 2 Thivi_2101 IPR029056 Ribokinase-like Thivi_2101 IPR011914 RfaE bifunctional protein, domain II Thivi_2101 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2101 IPR011611 Carbohydrate kinase PfkB Thivi_2101 IPR004821 Cytidyltransferase-like domain Thivi_2101 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thivi_2101 IPR023030 Bifunctional protein HldE Thivi_2101 IPR011913 RfaE bifunctional protein, domain I Thivi_2102 IPR004090 Chemotaxis methyl-accepting receptor Thivi_2102 IPR003660 HAMP domain Thivi_2102 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_2103 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily Thivi_2103 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal Thivi_2103 IPR039901 3-deoxy-D-manno-octulosonic acid transferase Thivi_2107 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2107 IPR001789 Signal transduction response regulator, receiver domain Thivi_2107 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_2107 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_2107 IPR011006 CheY-like superfamily Thivi_2107 IPR039420 Transcriptional regulatory protein WalR-like Thivi_2108 IPR003660 HAMP domain Thivi_2108 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2108 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2108 IPR005467 Histidine kinase domain Thivi_2108 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2108 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2108 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2108 IPR041328 ResE, histidine kinase sensor domain Thivi_2108 IPR000014 PAS domain Thivi_2108 IPR035965 PAS domain superfamily Thivi_2108 IPR013767 PAS fold Thivi_2110 IPR003018 GAF domain Thivi_2110 IPR029016 GAF-like domain superfamily Thivi_2110 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2110 IPR013654 PAS fold-2 Thivi_2110 IPR016132 Phytochrome chromophore attachment domain Thivi_2110 IPR001294 Phytochrome Thivi_2110 IPR013515 Phytochrome, central region Thivi_2110 IPR005467 Histidine kinase domain Thivi_2110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2110 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2110 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2110 IPR035965 PAS domain superfamily Thivi_2111 IPR029787 Nucleotide cyclase Thivi_2111 IPR000160 GGDEF domain Thivi_2111 IPR035919 EAL domain superfamily Thivi_2111 IPR001633 EAL domain Thivi_2111 IPR005330 MHYT domain Thivi_2113 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Thivi_2113 IPR000811 Glycosyl transferase, family 35 Thivi_2113 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thivi_2114 IPR023962 Probable phosphoketolase Thivi_2114 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase Thivi_2114 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal Thivi_2114 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site Thivi_2114 IPR029061 Thiamin diphosphate-binding fold Thivi_2114 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site Thivi_2114 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_2114 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Thivi_2115 IPR011335 Restriction endonuclease type II-like Thivi_2115 IPR008538 Domain of unknown function DUF820 Thivi_2116 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial Thivi_2116 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Thivi_2116 IPR018982 RQC domain Thivi_2116 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2116 IPR004589 DNA helicase, ATP-dependent, RecQ type Thivi_2116 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2116 IPR001650 Helicase, C-terminal Thivi_2116 IPR002121 HRDC domain Thivi_2116 IPR010997 HRDC-like superfamily Thivi_2116 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2116 IPR011545 DEAD/DEAH box helicase domain Thivi_2120 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Thivi_2120 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Thivi_2120 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Thivi_2120 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Thivi_2120 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Thivi_2120 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_2120 IPR005743 DNA gyrase, subunit A Thivi_2121 IPR022278 Phosphoserine aminotransferase Thivi_2121 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_2121 IPR000192 Aminotransferase class V domain Thivi_2121 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2121 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_2121 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_2122 IPR029009 Allosteric substrate binding domain superfamily Thivi_2122 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Thivi_2122 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Thivi_2122 IPR006236 D-3-phosphoglycerate dehydrogenase Thivi_2122 IPR036291 NAD(P)-binding domain superfamily Thivi_2122 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thivi_2122 IPR002912 ACT domain Thivi_2122 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_2123 IPR001086 Prephenate dehydratase Thivi_2123 IPR002912 ACT domain Thivi_2123 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Thivi_2123 IPR036263 Chorismate mutase type II superfamily Thivi_2123 IPR036979 Chorismate mutase domain superfamily Thivi_2123 IPR002701 Chorismate mutase II, prokaryotic-type Thivi_2123 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain Thivi_2123 IPR018528 Prephenate dehydratase, conserved site Thivi_2124 IPR005861 Histidinol-phosphate aminotransferase family Thivi_2124 IPR004839 Aminotransferase, class I/classII Thivi_2124 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2124 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Thivi_2124 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_2124 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_2125 IPR003099 Prephenate dehydrogenase Thivi_2125 IPR036291 NAD(P)-binding domain superfamily Thivi_2125 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_2126 IPR028366 Phosphate transport system protein PhoU Thivi_2126 IPR038078 PhoU-like domain superfamily Thivi_2126 IPR026022 PhoU domain Thivi_2127 IPR013785 Aldolase-type TIM barrel Thivi_2127 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_2127 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2127 IPR006638 Elp3/MiaB/NifB Thivi_2127 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Thivi_2127 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Thivi_2127 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal Thivi_2127 IPR007197 Radical SAM Thivi_2128 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2128 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2129 IPR006503 Nitrogenase-associated protein Thivi_2129 IPR006660 Arsenate reductase-like Thivi_2129 IPR036249 Thioredoxin-like superfamily Thivi_2130 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2130 IPR016440 Rubredoxin-oxygen oxidoreductase Thivi_2130 IPR008254 Flavodoxin/nitric oxide synthase Thivi_2130 IPR001226 Flavodoxin, conserved site Thivi_2130 IPR029039 Flavoprotein-like superfamily Thivi_2130 IPR001279 Metallo-beta-lactamase Thivi_2131 IPR012675 Beta-grasp domain superfamily Thivi_2131 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thivi_2131 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_2131 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_2132 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_2132 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_2132 IPR012675 Beta-grasp domain superfamily Thivi_2132 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thivi_2133 IPR006975 NifQ Thivi_2134 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2134 IPR005502 ADP-ribosylation/Crystallin J1 Thivi_2134 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase Thivi_2141 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Thivi_2141 IPR008707 PilC beta-propeller domain Thivi_2142 IPR001082 Fimbrial protein pilin Thivi_2142 IPR012902 Prokaryotic N-terminal methylation site Thivi_2146 IPR039368 Acetolactate synthase large subunit, TPP binding domain Thivi_2146 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thivi_2146 IPR012000 Thiamine pyrophosphate enzyme, central domain Thivi_2146 IPR029061 Thiamin diphosphate-binding fold Thivi_2146 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_2146 IPR012846 Acetolactate synthase, large subunit, biosynthetic Thivi_2146 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thivi_2148 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2148 IPR005467 Histidine kinase domain Thivi_2148 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2148 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2148 IPR035965 PAS domain superfamily Thivi_2148 IPR013654 PAS fold-2 Thivi_2148 IPR029016 GAF-like domain superfamily Thivi_2148 IPR003018 GAF domain Thivi_2148 IPR016132 Phytochrome chromophore attachment domain Thivi_2148 IPR001294 Phytochrome Thivi_2148 IPR013515 Phytochrome, central region Thivi_2148 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2149 IPR011006 CheY-like superfamily Thivi_2149 IPR001789 Signal transduction response regulator, receiver domain Thivi_2150 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2150 IPR001789 Signal transduction response regulator, receiver domain Thivi_2150 IPR005467 Histidine kinase domain Thivi_2150 IPR011006 CheY-like superfamily Thivi_2150 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2150 IPR029151 Periplasmic sensor-like domain superfamily Thivi_2150 IPR035965 PAS domain superfamily Thivi_2150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2150 IPR015387 LuxQ, periplasmic Thivi_2150 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2151 IPR011076 Malate synthase-like superfamily Thivi_2151 IPR001465 Malate synthase Thivi_2151 IPR006253 Malate synthase G Thivi_2151 IPR023310 Malate synthase G, beta sub-domain Thivi_2153 IPR002549 Transmembrane protein TqsA-like Thivi_2155 IPR005119 LysR, substrate-binding Thivi_2155 IPR000847 Transcription regulator HTH, LysR Thivi_2155 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2155 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2157 IPR013988 PhnA protein, C-terminal Thivi_2157 IPR013987 PhnA protein, N-terminal Thivi_2157 IPR004624 PhnA protein Thivi_2159 IPR032836 DsrE2-like family Thivi_2159 IPR027396 DsrEFH-like Thivi_2160 IPR001455 TusA-like domain Thivi_2160 IPR036868 TusA-like domain superfamily Thivi_2161 IPR001763 Rhodanese-like domain Thivi_2161 IPR036873 Rhodanese-like domain superfamily Thivi_2162 IPR006367 Sirohaem synthase, N-terminal Thivi_2162 IPR000878 Tetrapyrrole methylase Thivi_2162 IPR035996 Tetrapyrrole methylase superfamily Thivi_2162 IPR014776 Tetrapyrrole methylase, subdomain 2 Thivi_2162 IPR006366 Uroporphyrin-III C-methyltransferase Thivi_2162 IPR036291 NAD(P)-binding domain superfamily Thivi_2162 IPR037115 Sirohaem synthase, dimerisation domain superfamily Thivi_2162 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Thivi_2162 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_2162 IPR019478 Sirohaem synthase, dimerisation domain Thivi_2162 IPR028281 Siroheme synthase, central domain Thivi_2162 IPR012409 Sirohaem synthase Thivi_2163 IPR023346 Lysozyme-like domain superfamily Thivi_2163 IPR000189 Prokaryotic transglycosylase, active site Thivi_2163 IPR008258 Transglycosylase SLT domain 1 Thivi_2164 IPR003325 TerD domain Thivi_2166 IPR003325 TerD domain Thivi_2169 IPR003325 TerD domain Thivi_2170 IPR003325 TerD domain Thivi_2170 IPR017115 Tellurite resistance, TerA Thivi_2173 IPR028157 PELOTA RNA-binding domain Thivi_2173 IPR011215 Phosphoribosyl transferase Thivi_2177 IPR001509 NAD-dependent epimerase/dehydratase Thivi_2177 IPR036291 NAD(P)-binding domain superfamily Thivi_2178 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Thivi_2178 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Thivi_2178 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Thivi_2178 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Thivi_2178 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Thivi_2178 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Thivi_2178 IPR036291 NAD(P)-binding domain superfamily Thivi_2178 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_2179 IPR018392 LysM domain Thivi_2179 IPR036779 LysM domain superfamily Thivi_2179 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2179 IPR007055 BON domain Thivi_2184 IPR036065 BolA-like superfamily Thivi_2184 IPR002634 BolA protein Thivi_2186 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Thivi_2186 IPR032090 Peptide chain release factor 3, C-terminal Thivi_2186 IPR005225 Small GTP-binding protein domain Thivi_2186 IPR004548 Peptide chain release factor 3 Thivi_2186 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2186 IPR031157 Tr-type G domain, conserved site Thivi_2186 IPR035647 EF-G domain III/V-like Thivi_2186 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2186 IPR000795 Transcription factor, GTP-binding domain Thivi_2186 IPR041732 Peptide chain release factor 3, GTP-binding domain Thivi_2188 IPR029045 ClpP/crotonase-like domain superfamily Thivi_2188 IPR004635 Peptidase S49, SppA Thivi_2188 IPR002142 Peptidase S49 Thivi_2189 IPR006439 HAD hydrolase, subfamily IA Thivi_2189 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Thivi_2189 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_2189 IPR023214 HAD superfamily Thivi_2189 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_2189 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Thivi_2189 IPR037512 Phosphoglycolate phosphatase, prokaryotic Thivi_2189 IPR036412 HAD-like superfamily Thivi_2190 IPR006225 Pseudouridine synthase, RluC/RluD Thivi_2190 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Thivi_2190 IPR036986 RNA-binding S4 domain superfamily Thivi_2190 IPR002942 RNA-binding S4 domain Thivi_2190 IPR006145 Pseudouridine synthase, RsuA/RluA Thivi_2190 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_2191 IPR028878 Ribonuclease E Thivi_2191 IPR003029 S1 domain Thivi_2191 IPR004659 Ribonuclease E/G Thivi_2191 IPR021968 Polyribonucleotide phosphorylase C-terminal Thivi_2191 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Thivi_2191 IPR022967 RNA-binding domain, S1 Thivi_2191 IPR012340 Nucleic acid-binding, OB-fold Thivi_2193 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_2193 IPR001296 Glycosyl transferase, family 1 Thivi_2195 IPR023485 Phosphotyrosine protein phosphatase I Thivi_2195 IPR036196 Phosphotyrosine protein phosphatase I superfamily Thivi_2195 IPR017867 Protein-tyrosine phosphatase, low molecular weight Thivi_2201 IPR012902 Prokaryotic N-terminal methylation site Thivi_2201 IPR001082 Fimbrial protein pilin Thivi_2207 IPR024560 Uncharacterised protein family UPF0313, C-terminal Thivi_2207 IPR020612 Methylthiotransferase, conserved site Thivi_2207 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2207 IPR022946 Uncharacterised protein family UPF0313 Thivi_2207 IPR006638 Elp3/MiaB/NifB Thivi_2207 IPR007197 Radical SAM Thivi_2207 IPR013704 Uncharacterised protein family UPF0313, N-terminal Thivi_2208 IPR002898 MotA/TolQ/ExbB proton channel Thivi_2208 IPR000540 Flagellar motor protein MotA, conserved site Thivi_2209 IPR036737 OmpA-like domain superfamily Thivi_2209 IPR006665 OmpA-like domain Thivi_2209 IPR025713 Motility protein B, N-terminal domain Thivi_2212 IPR001451 Hexapeptide repeat Thivi_2212 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD Thivi_2212 IPR011004 Trimeric LpxA-like superfamily Thivi_2212 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region Thivi_2214 IPR041107 RimK, PreATP-grasp domain Thivi_2214 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_2214 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Thivi_2214 IPR013815 ATP-grasp fold, subdomain 1 Thivi_2214 IPR013651 ATP-grasp fold, RimK-type Thivi_2214 IPR011761 ATP-grasp fold Thivi_2214 IPR006037 Regulator of K+ conductance, C-terminal Thivi_2217 IPR010169 Acetylornithine deacetylase ArgE Thivi_2217 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Thivi_2217 IPR011650 Peptidase M20, dimerisation domain Thivi_2217 IPR036264 Bacterial exopeptidase dimerisation domain Thivi_2217 IPR002933 Peptidase M20 Thivi_2218 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Thivi_2219 IPR022924 Cardiolipin synthase Thivi_2219 IPR027379 Cardiolipin synthase N-terminal Thivi_2219 IPR030840 Cardiolipin synthase A Thivi_2219 IPR001736 Phospholipase D/Transphosphatidylase Thivi_2219 IPR025202 Phospholipase D-like domain Thivi_2221 IPR029419 Argininosuccinate lyase, C-terminal Thivi_2221 IPR022761 Fumarate lyase, N-terminal Thivi_2221 IPR000362 Fumarate lyase family Thivi_2221 IPR009049 Argininosuccinate lyase Thivi_2221 IPR020557 Fumarate lyase, conserved site Thivi_2221 IPR008948 L-Aspartase-like Thivi_2222 IPR007492 LytTR DNA-binding domain Thivi_2222 IPR011006 CheY-like superfamily Thivi_2222 IPR001789 Signal transduction response regulator, receiver domain Thivi_2224 IPR000150 Cof family Thivi_2224 IPR006379 HAD-superfamily hydrolase, subfamily IIB Thivi_2224 IPR036412 HAD-like superfamily Thivi_2227 IPR004540 Translation elongation factor EFG/EF2 Thivi_2227 IPR031157 Tr-type G domain, conserved site Thivi_2227 IPR009022 Elongation factor G, domain III Thivi_2227 IPR035647 EF-G domain III/V-like Thivi_2227 IPR035649 EFG, domain V Thivi_2227 IPR000640 Elongation factor EFG, domain V-like Thivi_2227 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_2227 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2227 IPR041095 Elongation Factor G, domain II Thivi_2227 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2227 IPR005225 Small GTP-binding protein domain Thivi_2227 IPR000795 Transcription factor, GTP-binding domain Thivi_2227 IPR005517 Translation elongation factor EFG/EF2, domain IV Thivi_2227 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2227 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2228 IPR008914 Phosphatidylethanolamine-binding protein Thivi_2228 IPR005247 YbhB/YbcL Thivi_2228 IPR036610 PEBP-like superfamily Thivi_2229 IPR035474 KpsF-like, SIS domain Thivi_2229 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type Thivi_2229 IPR001347 Sugar isomerase (SIS) Thivi_2229 IPR000644 CBS domain Thivi_2230 IPR036412 HAD-like superfamily Thivi_2230 IPR023214 HAD superfamily Thivi_2230 IPR010023 KdsC family Thivi_2233 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Thivi_2233 IPR003593 AAA+ ATPase domain Thivi_2233 IPR017871 ABC transporter, conserved site Thivi_2233 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2233 IPR030921 LPS export ABC transporter, ATP-binding protein LptB Thivi_2233 IPR003439 ABC transporter-like Thivi_2234 IPR000394 RNA polymerase sigma factor 54 Thivi_2234 IPR007046 RNA polymerase sigma factor 54, core-binding domain Thivi_2234 IPR007634 RNA polymerase sigma factor 54, DNA-binding Thivi_2234 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Thivi_2235 IPR003489 Ribosome hibernation promoting factor/RaiA Thivi_2235 IPR036567 Ribosome hibernation promotion factor-like Thivi_2237 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN Thivi_2237 IPR016152 Phosphotransferase/anion transporter Thivi_2237 IPR002178 PTS EIIA type-2 domain Thivi_2238 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_2238 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal Thivi_2238 IPR011104 HPr kinase/phosphorylase, C-terminal Thivi_2238 IPR003755 HPr(Ser) kinase/phosphorylase Thivi_2239 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2239 IPR005337 RapZ-like family Thivi_2241 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Thivi_2241 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Thivi_2241 IPR035895 HPr-like superfamily Thivi_2241 IPR000032 Phosphocarrier protein HPr-like Thivi_2242 IPR036637 Phosphohistidine domain superfamily Thivi_2242 IPR024692 Phosphotransferase system, enzyme I Thivi_2242 IPR006318 Phosphotransferase system, enzyme I-like Thivi_2242 IPR008731 Phosphotransferase system, enzyme I N-terminal Thivi_2242 IPR036618 PtsI, HPr-binding domain superfamily Thivi_2242 IPR000121 PEP-utilising enzyme, C-terminal Thivi_2242 IPR040442 Pyruvate kinase-like domain superfamily Thivi_2242 IPR018274 PEP-utilising enzyme, active site Thivi_2242 IPR008279 PEP-utilising enzyme, mobile domain Thivi_2242 IPR023151 PEP-utilising enzyme, conserved site Thivi_2242 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_2243 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily Thivi_2243 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2243 IPR038076 MgtE, N-terminal domain superfamily Thivi_2243 IPR006667 SLC41 divalent cation transporters, integral membrane domain Thivi_2243 IPR006669 Magnesium transporter MgtE Thivi_2243 IPR000644 CBS domain Thivi_2243 IPR038048 Magnesium transporter MgtE, transmembrane domain Thivi_2249 IPR001031 Thioesterase Thivi_2249 IPR009081 Phosphopantetheine binding ACP domain Thivi_2249 IPR020802 Polyketide synthase, thioesterase domain Thivi_2249 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Thivi_2249 IPR001242 Condensation domain Thivi_2249 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Thivi_2249 IPR000873 AMP-dependent synthetase/ligase Thivi_2249 IPR020845 AMP-binding, conserved site Thivi_2249 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_2249 IPR036736 ACP-like superfamily Thivi_2249 IPR029058 Alpha/Beta hydrolase fold Thivi_2249 IPR010071 Amino acid adenylation domain Thivi_2249 IPR042099 AMP-dependent synthetase-like superfamily Thivi_2250 IPR029069 HotDog domain superfamily Thivi_2250 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Thivi_2250 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Thivi_2254 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Thivi_2254 IPR018201 Beta-ketoacyl synthase, active site Thivi_2254 IPR014031 Beta-ketoacyl synthase, C-terminal Thivi_2254 IPR000794 Beta-ketoacyl synthase Thivi_2254 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thivi_2254 IPR016039 Thiolase-like Thivi_2254 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_2257 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2257 IPR001173 Glycosyltransferase 2-like Thivi_2263 IPR003753 Exonuclease VII, large subunit Thivi_2263 IPR020579 Exonuclease VII, large subunit, C-terminal Thivi_2263 IPR025824 OB-fold nucleic acid binding domain Thivi_2265 IPR013785 Aldolase-type TIM barrel Thivi_2265 IPR000644 CBS domain Thivi_2265 IPR005990 Inosine-5'-monophosphate dehydrogenase Thivi_2265 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Thivi_2265 IPR001093 IMP dehydrogenase/GMP reductase Thivi_2268 IPR022310 NAD/GMP synthase Thivi_2268 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2268 IPR025777 GMP synthetase ATP pyrophosphatase domain Thivi_2268 IPR029062 Class I glutamine amidotransferase-like Thivi_2268 IPR017926 Glutamine amidotransferase Thivi_2268 IPR001674 GMP synthase, C-terminal Thivi_2268 IPR022955 GMP synthase Thivi_2268 IPR004739 GMP synthase, glutamine amidotransferase Thivi_2274 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Thivi_2274 IPR013785 Aldolase-type TIM barrel Thivi_2275 IPR016192 APOBEC/CMP deaminase, zinc-binding Thivi_2275 IPR002125 Cytidine and deoxycytidylate deaminase domain Thivi_2275 IPR016193 Cytidine deaminase-like Thivi_2275 IPR028883 tRNA-specific adenosine deaminase Thivi_2276 IPR000358 Ribonucleotide reductase small subunit family Thivi_2276 IPR033909 Ribonucleotide reductase small subunit Thivi_2276 IPR012348 Ribonucleotide reductase-like Thivi_2276 IPR009078 Ferritin-like superfamily Thivi_2278 IPR033764 SD-repeat containing protein, B domain Thivi_2278 IPR019931 LPXTG cell wall anchor domain Thivi_2278 IPR011266 Fibrinogen-binding domain 2 Thivi_2278 IPR008966 Adhesion domain superfamily Thivi_2278 IPR005877 YSIRK Gram-positive signal peptide Thivi_2278 IPR011252 Fibrogen-binding domain 1 Thivi_2278 IPR041171 SDR-like Ig domain Thivi_2278 IPR013783 Immunoglobulin-like fold Thivi_2278 IPR019948 Gram-positive LPXTG cell wall anchor Thivi_2280 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2280 IPR038770 Sodium/solute symporter superfamily Thivi_2280 IPR030151 K(+)/H(+) antiporter NhaP Thivi_2280 IPR023729 K(+)/H(+) antiporter NhaP2 Thivi_2280 IPR006153 Cation/H+ exchanger Thivi_2280 IPR006037 Regulator of K+ conductance, C-terminal Thivi_2280 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_2280 IPR005170 Transporter-associated domain Thivi_2280 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2281 IPR011051 RmlC-like cupin domain superfamily Thivi_2281 IPR009664 Pyrimidine/purine nucleoside phosphorylase Thivi_2281 IPR014710 RmlC-like jelly roll fold Thivi_2283 IPR004176 Clp, N-terminal Thivi_2283 IPR017729 Type VI secretion system, ATPase ClpV1 Thivi_2283 IPR003959 ATPase, AAA-type, core Thivi_2283 IPR003593 AAA+ ATPase domain Thivi_2283 IPR001270 ClpA/B family Thivi_2283 IPR018368 ClpA/B, conserved site 1 Thivi_2283 IPR041546 ClpA/ClpB, AAA lid domain Thivi_2283 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2283 IPR036628 Clp, N-terminal domain superfamily Thivi_2283 IPR019489 Clp ATPase, C-terminal Thivi_2288 IPR036624 Hcp1-like superfamily Thivi_2288 IPR008514 Type VI secretion system effector, Hcp Thivi_2297 IPR037026 Vgr protein, OB-fold domain superfamily Thivi_2297 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Thivi_2297 IPR006531 Gp5 N-terminal Thivi_2297 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Thivi_2301 IPR025713 Motility protein B, N-terminal domain Thivi_2301 IPR036737 OmpA-like domain superfamily Thivi_2301 IPR006665 OmpA-like domain Thivi_2304 IPR001932 PPM-type phosphatase domain Thivi_2304 IPR036457 PPM-type phosphatase domain superfamily Thivi_2304 IPR015655 Protein phosphatase 2C family Thivi_2307 IPR000086 NUDIX hydrolase domain Thivi_2307 IPR020084 NUDIX hydrolase, conserved site Thivi_2307 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_2307 IPR020476 NUDIX hydrolase Thivi_2307 IPR003561 Mutator MutT Thivi_2308 IPR042195 ArgJ beta chain, C-terminal domain Thivi_2308 IPR016117 ArgJ-like domain superfamily Thivi_2308 IPR002813 Arginine biosynthesis protein ArgJ Thivi_2309 IPR000185 Protein translocase subunit SecA Thivi_2309 IPR004027 SEC-C motif Thivi_2309 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2309 IPR011130 SecA, preprotein cross-linking domain Thivi_2309 IPR014018 SecA motor DEAD Thivi_2309 IPR011115 SecA DEAD-like, N-terminal Thivi_2309 IPR011116 SecA Wing/Scaffold Thivi_2309 IPR036266 SecA, Wing/Scaffold superfamily Thivi_2309 IPR036670 SecA, preprotein cross-linking domain superfamily Thivi_2310 IPR018392 LysM domain Thivi_2310 IPR011055 Duplicated hybrid motif Thivi_2310 IPR036779 LysM domain superfamily Thivi_2310 IPR016047 Peptidase M23 Thivi_2312 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase Thivi_2312 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal Thivi_2312 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal Thivi_2312 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2313 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Thivi_2313 IPR008280 Tubulin/FtsZ, C-terminal Thivi_2313 IPR024757 Cell division protein FtsZ, C-terminal Thivi_2313 IPR020805 Cell division protein FtsZ, conserved site Thivi_2313 IPR000158 Cell division protein FtsZ Thivi_2313 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Thivi_2313 IPR003008 Tubulin/FtsZ, GTPase domain Thivi_2314 IPR020823 Cell division protein FtsA Thivi_2314 IPR003494 SHS2 domain inserted in FtsA Thivi_2315 IPR013685 POTRA domain, FtsQ-type Thivi_2315 IPR001711 Phospholipase C, phosphatidylinositol-specific, Y domain Thivi_2315 IPR026579 Cell division protein FtsQ Thivi_2315 IPR005548 Cell division protein FtsQ/DivIB Thivi_2315 IPR034746 POTRA domain Thivi_2316 IPR016185 Pre-ATP-grasp domain superfamily Thivi_2316 IPR011761 ATP-grasp fold Thivi_2316 IPR013815 ATP-grasp fold, subdomain 1 Thivi_2316 IPR005905 D-alanine--D-alanine ligase Thivi_2316 IPR011095 D-alanine--D-alanine ligase, C-terminal Thivi_2316 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Thivi_2316 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Thivi_2317 IPR016166 FAD-binding domain, PCMH-type Thivi_2317 IPR006094 FAD linked oxidase, N-terminal Thivi_2317 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Thivi_2317 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2317 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily Thivi_2317 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Thivi_2317 IPR016167 FAD-binding, type PCMH, subdomain 1 Thivi_2317 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2318 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_2318 IPR036565 Mur-like, catalytic domain superfamily Thivi_2318 IPR000713 Mur ligase, N-terminal catalytic domain Thivi_2318 IPR013221 Mur ligase, central Thivi_2318 IPR004101 Mur ligase, C-terminal Thivi_2318 IPR005758 UDP-N-acetylmuramate--L-alanine ligase Thivi_2319 IPR006009 N-acetylglucosaminyltransferase, MurG Thivi_2319 IPR004276 Glycosyltransferase family 28, N-terminal domain Thivi_2319 IPR007235 Glycosyl transferase, family 28, C-terminal Thivi_2320 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Thivi_2320 IPR013437 Probable peptidoglycan glycosyltransferase FtsW Thivi_2321 IPR036565 Mur-like, catalytic domain superfamily Thivi_2321 IPR004101 Mur ligase, C-terminal Thivi_2321 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_2321 IPR013221 Mur ligase, central Thivi_2321 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Thivi_2322 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Thivi_2322 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Thivi_2322 IPR000715 Glycosyl transferase, family 4 Thivi_2323 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_2323 IPR013221 Mur ligase, central Thivi_2323 IPR000713 Mur ligase, N-terminal catalytic domain Thivi_2323 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Thivi_2323 IPR004101 Mur ligase, C-terminal Thivi_2323 IPR036565 Mur-like, catalytic domain superfamily Thivi_2323 IPR035911 MurE/MurF, N-terminal Thivi_2324 IPR001460 Penicillin-binding protein, transpeptidase Thivi_2324 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Thivi_2324 IPR005311 Penicillin-binding protein, dimerisation domain Thivi_2324 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2324 IPR037532 Peptidoglycan D,D-transpeptidase FtsI Thivi_2325 IPR011922 Cell division protein FtsL Thivi_2326 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2326 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily Thivi_2326 IPR002903 Ribosomal RNA small subunit methyltransferase H Thivi_2327 IPR007159 SpoVT-AbrB domain Thivi_2327 IPR037914 SpoVT-AbrB domain superfamily Thivi_2327 IPR003444 Transcriptional regulator MraZ Thivi_2327 IPR035644 MraZ, C-terminal Thivi_2327 IPR038619 MraZ superfamily Thivi_2327 IPR035642 MraZ, N-terminal Thivi_2327 IPR020603 MraZ domain Thivi_2329 IPR035996 Tetrapyrrole methylase superfamily Thivi_2329 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Thivi_2329 IPR008189 rRNA small subunit methyltransferase I Thivi_2329 IPR014776 Tetrapyrrole methylase, subdomain 2 Thivi_2329 IPR014777 Tetrapyrrole methylase, subdomain 1 Thivi_2329 IPR000878 Tetrapyrrole methylase Thivi_2330 IPR028082 Periplasmic binding protein-like I Thivi_2330 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_2330 IPR007443 Penicillin-binding protein activator LpoA Thivi_2331 IPR011856 tRNA endonuclease-like domain superfamily Thivi_2331 IPR003509 Uncharacterised protein family UPF0102 Thivi_2331 IPR011335 Restriction endonuclease type II-like Thivi_2332 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2332 IPR007055 BON domain Thivi_2333 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_2333 IPR004113 FAD-linked oxidase, C-terminal Thivi_2333 IPR004490 Glycolate oxidase subunit GlcD Thivi_2333 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2333 IPR016166 FAD-binding domain, PCMH-type Thivi_2333 IPR006094 FAD linked oxidase, N-terminal Thivi_2333 IPR016164 FAD-linked oxidase-like, C-terminal Thivi_2338 IPR001633 EAL domain Thivi_2338 IPR035919 EAL domain superfamily Thivi_2338 IPR000160 GGDEF domain Thivi_2338 IPR005330 MHYT domain Thivi_2338 IPR029787 Nucleotide cyclase Thivi_2339 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase Thivi_2339 IPR001789 Signal transduction response regulator, receiver domain Thivi_2339 IPR011006 CheY-like superfamily Thivi_2339 IPR029787 Nucleotide cyclase Thivi_2340 IPR003018 GAF domain Thivi_2340 IPR029016 GAF-like domain superfamily Thivi_2340 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2340 IPR005467 Histidine kinase domain Thivi_2340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2340 IPR035965 PAS domain superfamily Thivi_2340 IPR013654 PAS fold-2 Thivi_2340 IPR016132 Phytochrome chromophore attachment domain Thivi_2340 IPR001294 Phytochrome Thivi_2340 IPR013515 Phytochrome, central region Thivi_2341 IPR013785 Aldolase-type TIM barrel Thivi_2341 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype Thivi_2341 IPR000771 Fructose-bisphosphate aldolase, class-II Thivi_2343 IPR015793 Pyruvate kinase, barrel Thivi_2343 IPR015806 Pyruvate kinase, insert domain superfamily Thivi_2343 IPR018209 Pyruvate kinase, active site Thivi_2343 IPR036918 Pyruvate kinase, C-terminal domain superfamily Thivi_2343 IPR040442 Pyruvate kinase-like domain superfamily Thivi_2343 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_2343 IPR011037 Pyruvate kinase-like, insert domain superfamily Thivi_2343 IPR001697 Pyruvate kinase Thivi_2343 IPR015795 Pyruvate kinase, C-terminal Thivi_2344 IPR015911 Phosphoglycerate kinase, conserved site Thivi_2344 IPR001576 Phosphoglycerate kinase Thivi_2344 IPR015824 Phosphoglycerate kinase, N-terminal Thivi_2344 IPR036043 Phosphoglycerate kinase superfamily Thivi_2347 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Thivi_2347 IPR036291 NAD(P)-binding domain superfamily Thivi_2347 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Thivi_2347 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Thivi_2347 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Thivi_2347 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Thivi_2348 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_2348 IPR005474 Transketolase, N-terminal Thivi_2348 IPR033248 Transketolase, C-terminal domain Thivi_2348 IPR029061 Thiamin diphosphate-binding fold Thivi_2348 IPR033247 Transketolase family Thivi_2348 IPR020826 Transketolase binding site Thivi_2348 IPR005478 Transketolase, bacterial-like Thivi_2348 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_2350 IPR022636 S-adenosylmethionine synthetase superfamily Thivi_2350 IPR002133 S-adenosylmethionine synthetase Thivi_2350 IPR022628 S-adenosylmethionine synthetase, N-terminal Thivi_2350 IPR022630 S-adenosylmethionine synthetase, C-terminal Thivi_2350 IPR022631 S-adenosylmethionine synthetase, conserved site Thivi_2350 IPR022629 S-adenosylmethionine synthetase, central domain Thivi_2355 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_2355 IPR003660 HAMP domain Thivi_2359 IPR001294 Phytochrome Thivi_2359 IPR029016 GAF-like domain superfamily Thivi_2359 IPR016132 Phytochrome chromophore attachment domain Thivi_2359 IPR013654 PAS fold-2 Thivi_2359 IPR035965 PAS domain superfamily Thivi_2359 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2359 IPR013515 Phytochrome, central region Thivi_2359 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2359 IPR005467 Histidine kinase domain Thivi_2359 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2359 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2359 IPR003018 GAF domain Thivi_2360 IPR009057 Homeobox-like domain superfamily Thivi_2360 IPR000014 PAS domain Thivi_2360 IPR035965 PAS domain superfamily Thivi_2360 IPR011785 Transcription regulator PpsR Thivi_2360 IPR002197 DNA binding HTH domain, Fis-type Thivi_2362 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_2362 IPR010998 Integrase/recombinase, N-terminal Thivi_2362 IPR025166 Integrase, DNA-binding domain Thivi_2362 IPR038488 Integrase, DNA-binding domain superfamily Thivi_2362 IPR002104 Integrase, catalytic domain Thivi_2362 IPR013762 Integrase-like, catalytic domain superfamily Thivi_2375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_2375 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Thivi_2375 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_2378 IPR037522 HD-GYP domain Thivi_2378 IPR001789 Signal transduction response regulator, receiver domain Thivi_2378 IPR011006 CheY-like superfamily Thivi_2378 IPR003607 HD/PDEase domain Thivi_2379 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2379 IPR005467 Histidine kinase domain Thivi_2379 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2379 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2379 IPR036641 HPT domain superfamily Thivi_2379 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2379 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_2379 IPR011006 CheY-like superfamily Thivi_2379 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2379 IPR001789 Signal transduction response regulator, receiver domain Thivi_2380 IPR016132 Phytochrome chromophore attachment domain Thivi_2380 IPR013654 PAS fold-2 Thivi_2380 IPR035965 PAS domain superfamily Thivi_2380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2380 IPR005467 Histidine kinase domain Thivi_2380 IPR013515 Phytochrome, central region Thivi_2380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2380 IPR029016 GAF-like domain superfamily Thivi_2380 IPR001294 Phytochrome Thivi_2380 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2380 IPR003018 GAF domain Thivi_2381 IPR035069 TTHA1013/TTHA0281-like Thivi_2382 IPR012933 HicA mRNA interferase family Thivi_2382 IPR038570 HicA superfamily Thivi_2386 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thivi_2386 IPR002986 Diaminopimelate decarboxylase, LysA Thivi_2386 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Thivi_2386 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Thivi_2386 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Thivi_2386 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thivi_2386 IPR000183 Ornithine/DAP/Arg decarboxylase Thivi_2386 IPR029066 PLP-binding barrel Thivi_2388 IPR001653 Diaminopimelate epimerase, DapF Thivi_2388 IPR018510 Diaminopimelate epimerase, active site Thivi_2390 IPR002104 Integrase, catalytic domain Thivi_2390 IPR013762 Integrase-like, catalytic domain superfamily Thivi_2390 IPR010998 Integrase/recombinase, N-terminal Thivi_2390 IPR004107 Integrase, SAM-like, N-terminal Thivi_2390 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_2390 IPR023009 Tyrosine recombinase XerC/XerD Thivi_2390 IPR011931 Tyrosine recombinase XerC Thivi_2394 IPR028154 AMP-dependent ligase, C-terminal Thivi_2394 IPR000873 AMP-dependent synthetase/ligase Thivi_2394 IPR042099 AMP-dependent synthetase-like superfamily Thivi_2394 IPR011880 Phenylacetate-CoA ligase Thivi_2396 IPR042099 AMP-dependent synthetase-like superfamily Thivi_2396 IPR000873 AMP-dependent synthetase/ligase Thivi_2396 IPR011880 Phenylacetate-CoA ligase Thivi_2396 IPR028154 AMP-dependent ligase, C-terminal Thivi_2398 IPR000873 AMP-dependent synthetase/ligase Thivi_2398 IPR020845 AMP-binding, conserved site Thivi_2398 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_2398 IPR010192 2-succinylbenzoate--CoA ligase Thivi_2398 IPR042099 AMP-dependent synthetase-like superfamily Thivi_2399 IPR004096 4-vinyl reductase, 4VR Thivi_2399 IPR010249 Bacteriochlorophyll 4-vinyl reductase Thivi_2399 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Thivi_2400 IPR007197 Radical SAM Thivi_2400 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2400 IPR006638 Elp3/MiaB/NifB Thivi_2400 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN Thivi_2400 IPR034505 Anaerobic coproporphyrinogen-III oxidase Thivi_2400 IPR010723 HemN, C-terminal Thivi_2401 IPR007197 Radical SAM Thivi_2401 IPR006638 Elp3/MiaB/NifB Thivi_2401 IPR034466 Methyltransferase, class B Thivi_2401 IPR006158 Cobalamin (vitamin B12)-binding domain Thivi_2401 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2402 IPR017496 Photosynthetic complex assembly protein 2, putative Thivi_2405 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal Thivi_2405 IPR005652 Photosynthetic reaction centre, H subunit Thivi_2405 IPR027275 PRC-barrel domain Thivi_2405 IPR011033 PRC-barrel-like superfamily Thivi_2405 IPR037097 Photosynthetic reaction centre, H subunit, N-terminal domain superfamily Thivi_2405 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal Thivi_2406 IPR007848 Methyltransferase small domain Thivi_2406 IPR010251 Magnesium-protoporphyrin IX methyltransferase Thivi_2406 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal Thivi_2406 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2407 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2407 IPR000392 NifH/frxC family Thivi_2407 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein Thivi_2407 IPR030655 NifH/chlL conserved site Thivi_2408 IPR003672 CobN/magnesium chelatase Thivi_2408 IPR022571 Magnesium chelatase, subunit H, N-terminal Thivi_2409 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2409 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thivi_2409 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Thivi_2409 IPR005969 Light-independent protochlorophyllide reductase, B subunit Thivi_2409 IPR042298 Proto-chlorophyllide reductase, C-terminal Thivi_2410 IPR005970 Light-independent protochlorophyllide reductase, N subunit Thivi_2410 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2411 IPR009905 2-vinyl bacteriochlorophyllide hydratase Thivi_2412 IPR002197 DNA binding HTH domain, Fis-type Thivi_2412 IPR009057 Homeobox-like domain superfamily Thivi_2412 IPR035965 PAS domain superfamily Thivi_2412 IPR000014 PAS domain Thivi_2412 IPR011785 Transcription regulator PpsR Thivi_2413 IPR006372 Bacteriochlorophyll/chlorophyll synthetase Thivi_2413 IPR000537 UbiA prenyltransferase family Thivi_2414 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2414 IPR010253 Geranylgeranyl reductase, plant/prokaryotic Thivi_2414 IPR011777 Geranylgeranyl reductase family Thivi_2415 IPR011545 DEAD/DEAH box helicase domain Thivi_2415 IPR007502 Helicase-associated domain Thivi_2415 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2415 IPR010225 ATP-dependent helicase HrpB Thivi_2415 IPR001650 Helicase, C-terminal Thivi_2415 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2415 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Thivi_2419 IPR036637 Phosphohistidine domain superfamily Thivi_2419 IPR001697 Pyruvate kinase Thivi_2419 IPR015806 Pyruvate kinase, insert domain superfamily Thivi_2419 IPR036918 Pyruvate kinase, C-terminal domain superfamily Thivi_2419 IPR015795 Pyruvate kinase, C-terminal Thivi_2419 IPR008279 PEP-utilising enzyme, mobile domain Thivi_2419 IPR015793 Pyruvate kinase, barrel Thivi_2419 IPR018209 Pyruvate kinase, active site Thivi_2419 IPR011037 Pyruvate kinase-like, insert domain superfamily Thivi_2419 IPR040442 Pyruvate kinase-like domain superfamily Thivi_2419 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_2423 IPR002611 IstB-like ATP-binding protein Thivi_2423 IPR003593 AAA+ ATPase domain Thivi_2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2423 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Thivi_2430 IPR004514 Glutamine-tRNA synthetase Thivi_2430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2430 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Thivi_2430 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_2430 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Thivi_2430 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily Thivi_2430 IPR022861 Glutamine-tRNA ligase, bacterial Thivi_2430 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Thivi_2430 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thivi_2430 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Thivi_2434 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2434 IPR001460 Penicillin-binding protein, transpeptidase Thivi_2435 IPR029065 Enolase C-terminal domain-like Thivi_2435 IPR029017 Enolase-like, N-terminal Thivi_2435 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_2435 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Thivi_2435 IPR010196 o-Succinylbenzoate synthase, MenC type1 Thivi_2437 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB Thivi_2437 IPR014748 Enoyl-CoA hydratase, C-terminal Thivi_2437 IPR029045 ClpP/crotonase-like domain superfamily Thivi_2437 IPR001753 Enoyl-CoA hydratase/isomerase Thivi_2437 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Thivi_2438 IPR036365 PGBD-like superfamily Thivi_2438 IPR002477 Peptidoglycan binding-like Thivi_2438 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2438 IPR003593 AAA+ ATPase domain Thivi_2438 IPR036366 PGBD superfamily Thivi_2440 IPR006669 Magnesium transporter MgtE Thivi_2440 IPR000644 CBS domain Thivi_2440 IPR006667 SLC41 divalent cation transporters, integral membrane domain Thivi_2440 IPR038076 MgtE, N-terminal domain superfamily Thivi_2440 IPR038048 Magnesium transporter MgtE, transmembrane domain Thivi_2440 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2440 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily Thivi_2441 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2441 IPR000014 PAS domain Thivi_2441 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2441 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2441 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2441 IPR005467 Histidine kinase domain Thivi_2441 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2441 IPR035965 PAS domain superfamily Thivi_2441 IPR013767 PAS fold Thivi_2442 IPR003593 AAA+ ATPase domain Thivi_2442 IPR011006 CheY-like superfamily Thivi_2442 IPR009057 Homeobox-like domain superfamily Thivi_2442 IPR002197 DNA binding HTH domain, Fis-type Thivi_2442 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2442 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_2442 IPR025944 Sigma-54 interaction domain, conserved site Thivi_2442 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_2442 IPR001789 Signal transduction response regulator, receiver domain Thivi_2443 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_2443 IPR033480 Single Cache domain 2 Thivi_2443 IPR003660 HAMP domain Thivi_2443 IPR004090 Chemotaxis methyl-accepting receptor Thivi_2444 IPR035919 EAL domain superfamily Thivi_2444 IPR000160 GGDEF domain Thivi_2444 IPR001633 EAL domain Thivi_2444 IPR005330 MHYT domain Thivi_2444 IPR029787 Nucleotide cyclase Thivi_2447 IPR005936 Peptidase, FtsH Thivi_2447 IPR003959 ATPase, AAA-type, core Thivi_2447 IPR041569 AAA ATPase, AAA+ lid domain Thivi_2447 IPR003593 AAA+ ATPase domain Thivi_2447 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2447 IPR003960 ATPase, AAA-type, conserved site Thivi_2447 IPR000642 Peptidase M41 Thivi_2447 IPR037219 Peptidase M41-like Thivi_2447 IPR011546 Peptidase M41, FtsH extracellular Thivi_2449 IPR016187 C-type lectin fold Thivi_2449 IPR042095 Sulfatase-modifying factor enzyme superfamily Thivi_2449 IPR005532 Sulfatase-modifying factor enzyme Thivi_2452 IPR001633 EAL domain Thivi_2452 IPR005330 MHYT domain Thivi_2452 IPR000160 GGDEF domain Thivi_2452 IPR029787 Nucleotide cyclase Thivi_2452 IPR035919 EAL domain superfamily Thivi_2453 IPR003607 HD/PDEase domain Thivi_2453 IPR006675 HDIG domain Thivi_2453 IPR037522 HD-GYP domain Thivi_2453 IPR006674 HD domain Thivi_2454 IPR011969 Clan AA aspartic peptidase, C-terminal Thivi_2454 IPR021109 Aspartic peptidase domain superfamily Thivi_2454 IPR001969 Aspartic peptidase, active site Thivi_2454 IPR034122 Retropepsin-like domain, bacterial Thivi_2455 IPR002035 von Willebrand factor, type A Thivi_2455 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2457 IPR007157 PspA/IM30 Thivi_2459 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Thivi_2459 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Thivi_2459 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Thivi_2459 IPR009056 Cytochrome c-like domain Thivi_2459 IPR036909 Cytochrome c-like domain superfamily Thivi_2460 IPR039435 Diguanylate cyclase DosC, globin sensor domain Thivi_2460 IPR000160 GGDEF domain Thivi_2460 IPR009050 Globin-like superfamily Thivi_2460 IPR012292 Globin/Protoglobin Thivi_2460 IPR029787 Nucleotide cyclase Thivi_2464 IPR017871 ABC transporter, conserved site Thivi_2464 IPR039421 Type I protein exporter Thivi_2464 IPR011527 ABC transporter type 1, transmembrane domain Thivi_2464 IPR003593 AAA+ ATPase domain Thivi_2464 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2464 IPR003439 ABC transporter-like Thivi_2464 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_2465 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2465 IPR005467 Histidine kinase domain Thivi_2465 IPR029095 NarX-like, N-terminal Thivi_2465 IPR042295 NarX-like, N-terminal domain superfamily Thivi_2465 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing Thivi_2465 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thivi_2465 IPR003660 HAMP domain Thivi_2466 IPR000792 Transcription regulator LuxR, C-terminal Thivi_2466 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2466 IPR001789 Signal transduction response regulator, receiver domain Thivi_2466 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_2466 IPR011006 CheY-like superfamily Thivi_2470 IPR011344 Single-stranded DNA-binding protein Thivi_2470 IPR012340 Nucleic acid-binding, OB-fold Thivi_2470 IPR000424 Primosome PriB/single-strand DNA-binding Thivi_2471 IPR036259 MFS transporter superfamily Thivi_2471 IPR011701 Major facilitator superfamily Thivi_2471 IPR020846 Major facilitator superfamily domain Thivi_2472 IPR003439 ABC transporter-like Thivi_2472 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2472 IPR004602 UvrABC system subunit A Thivi_2472 IPR041552 UvrA DNA-binding domain Thivi_2472 IPR041102 UvrA, interaction domain Thivi_2472 IPR017871 ABC transporter, conserved site Thivi_2475 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2475 IPR025199 DNA translocase FtsK, 4TM region Thivi_2475 IPR003593 AAA+ ATPase domain Thivi_2475 IPR002543 FtsK domain Thivi_2475 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2475 IPR041027 FtsK alpha domain Thivi_2475 IPR018541 FtsK gamma domain Thivi_2475 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2480 IPR001296 Glycosyl transferase, family 1 Thivi_2480 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_2481 IPR001296 Glycosyl transferase, family 1 Thivi_2481 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_2485 IPR001082 Fimbrial protein pilin Thivi_2485 IPR012902 Prokaryotic N-terminal methylation site Thivi_2490 IPR012337 Ribonuclease H-like superfamily Thivi_2490 IPR036397 Ribonuclease H superfamily Thivi_2490 IPR001584 Integrase, catalytic core Thivi_2490 IPR025948 HTH-like domain Thivi_2493 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_2493 IPR003477 mRNA interferase PemK-like Thivi_2497 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit Thivi_2498 IPR005776 Oxaloacetate decarboxylase, alpha subunit Thivi_2498 IPR001882 Biotin-binding site Thivi_2498 IPR003379 Carboxylase, conserved domain Thivi_2498 IPR000089 Biotin/lipoyl attachment Thivi_2498 IPR000891 Pyruvate carboxyltransferase Thivi_2498 IPR013785 Aldolase-type TIM barrel Thivi_2498 IPR011053 Single hybrid motif Thivi_2500 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2500 IPR001264 Glycosyl transferase, family 51 Thivi_2500 IPR023346 Lysozyme-like domain superfamily Thivi_2500 IPR036950 Penicillin binding protein transglycosylase domain Thivi_2500 IPR001460 Penicillin-binding protein, transpeptidase Thivi_2500 IPR009647 Penicillin-binding, C-terminal Thivi_2500 IPR011815 Penicillin-binding protein 1C Thivi_2501 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_2501 IPR010916 TonB box, conserved site Thivi_2501 IPR012910 TonB-dependent receptor, plug domain Thivi_2501 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_2501 IPR010917 TonB-dependent receptor, conserved site Thivi_2501 IPR039426 Vitamin B12 transporter BtuB-like Thivi_2501 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_2503 IPR033416 Periplasmic sensor domain CHASE7 Thivi_2503 IPR000160 GGDEF domain Thivi_2503 IPR029787 Nucleotide cyclase Thivi_2504 IPR011129 Cold shock domain Thivi_2504 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_2504 IPR003593 AAA+ ATPase domain Thivi_2504 IPR004665 Transcription termination factor Rho Thivi_2504 IPR011112 Rho termination factor, N-terminal Thivi_2504 IPR012340 Nucleic acid-binding, OB-fold Thivi_2504 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2504 IPR041703 Transcription termination factor Rho, ATP binding domain Thivi_2504 IPR011113 Rho termination factor, RNA-binding domain Thivi_2504 IPR036269 Rho termination factor, N-terminal domain superfamily Thivi_2505 IPR013766 Thioredoxin domain Thivi_2505 IPR036249 Thioredoxin-like superfamily Thivi_2505 IPR005746 Thioredoxin Thivi_2506 IPR001650 Helicase, C-terminal Thivi_2506 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_2506 IPR023554 ATP-dependent RNA helicase RhlB type Thivi_2506 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_2506 IPR022077 ATP-dependent RNA helicase RhlB Thivi_2506 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2506 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2506 IPR011545 DEAD/DEAH box helicase domain Thivi_2507 IPR036412 HAD-like superfamily Thivi_2507 IPR006439 HAD hydrolase, subfamily IA Thivi_2507 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_2507 IPR023214 HAD superfamily Thivi_2508 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_2508 IPR020084 NUDIX hydrolase, conserved site Thivi_2508 IPR000086 NUDIX hydrolase domain Thivi_2510 IPR037062 Malic enzyme, N-terminal domain superfamily Thivi_2510 IPR012302 Malic enzyme, NAD-binding Thivi_2510 IPR015884 Malic enzyme, conserved site Thivi_2510 IPR001891 Malic oxidoreductase Thivi_2510 IPR036291 NAD(P)-binding domain superfamily Thivi_2510 IPR023667 NAD-dependent malic enzyme, proteobacteria Thivi_2510 IPR012301 Malic enzyme, N-terminal domain Thivi_2511 IPR002550 CNNM, transmembrane domain Thivi_2511 IPR000644 CBS domain Thivi_2511 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2511 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2511 IPR005170 Transporter-associated domain Thivi_2512 IPR007476 Putative exonuclease, RdgC Thivi_2513 IPR001509 NAD-dependent epimerase/dehydratase Thivi_2513 IPR036291 NAD(P)-binding domain superfamily Thivi_2514 IPR018485 Carbohydrate kinase, FGGY, C-terminal Thivi_2515 IPR035520 High-affinity zinc uptake system protein ZnuA Thivi_2515 IPR006127 Periplasmic solute binding protein, ZnuA-like Thivi_2517 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2517 IPR017871 ABC transporter, conserved site Thivi_2517 IPR017882 Zinc import ATP-binding protein ZnuC Thivi_2517 IPR003593 AAA+ ATPase domain Thivi_2517 IPR003439 ABC transporter-like Thivi_2518 IPR006128 Adhesion lipoprotein Thivi_2518 IPR035520 High-affinity zinc uptake system protein ZnuA Thivi_2518 IPR006127 Periplasmic solute binding protein, ZnuA-like Thivi_2521 IPR015852 ABC transporter, molybdenum import, ModC Thivi_2521 IPR017871 ABC transporter, conserved site Thivi_2521 IPR003439 ABC transporter-like Thivi_2521 IPR003593 AAA+ ATPase domain Thivi_2521 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2521 IPR011868 Molybdate ABC transporter, ATP-binding protein Thivi_2521 IPR004606 Molybdenum-pterin binding Thivi_2521 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2521 IPR005116 Transport-associated OB, type 1 Thivi_2522 IPR035906 MetI-like superfamily Thivi_2522 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_2522 IPR011867 Molybdate ABC transporter, permease protein Thivi_2523 IPR005950 Molybdate ABC transporter, substrate-binding protein Thivi_2524 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2524 IPR016462 Molybdate-dependent transcriptional regulator ModE Thivi_2524 IPR004606 Molybdenum-pterin binding Thivi_2524 IPR005116 Transport-associated OB, type 1 Thivi_2524 IPR000847 Transcription regulator HTH, LysR Thivi_2524 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2524 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2524 IPR003725 Molybdenum-binding protein ModE, N-terminal Thivi_2526 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2526 IPR003725 Molybdenum-binding protein ModE, N-terminal Thivi_2526 IPR004606 Molybdenum-pterin binding Thivi_2526 IPR005116 Transport-associated OB, type 1 Thivi_2526 IPR016462 Molybdate-dependent transcriptional regulator ModE Thivi_2526 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2526 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2526 IPR000847 Transcription regulator HTH, LysR Thivi_2527 IPR022920 Disulphide bond formation protein DsbB Thivi_2527 IPR023380 DsbB-like superfamily Thivi_2527 IPR003752 Disulphide bond formation protein DsbB/BdbC Thivi_2529 IPR003691 Putative fluoride ion transporter CrcB Thivi_2530 IPR006603 PQ-loop repeat Thivi_2531 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Thivi_2531 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Thivi_2532 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily Thivi_2532 IPR026660 Phosphoribosyl-AMP cyclohydrolase Thivi_2532 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Thivi_2533 IPR001252 Malate dehydrogenase, active site Thivi_2533 IPR011060 Ribulose-phosphate binding barrel Thivi_2533 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Thivi_2533 IPR006062 Histidine biosynthesis Thivi_2533 IPR013785 Aldolase-type TIM barrel Thivi_2533 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Thivi_2534 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily Thivi_2534 IPR000807 Imidazoleglycerol-phosphate dehydratase Thivi_2534 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Thivi_2534 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2535 IPR006664 Outer membrane protein, bacterial Thivi_2535 IPR006690 Outer membrane protein, OmpA-like, conserved site Thivi_2535 IPR036737 OmpA-like domain superfamily Thivi_2535 IPR006665 OmpA-like domain Thivi_2538 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_2538 IPR001296 Glycosyl transferase, family 1 Thivi_2539 IPR042113 Phosphate acetyltransferase, domain 1 Thivi_2539 IPR002505 Phosphate acetyl/butaryl transferase Thivi_2539 IPR042112 Phosphate acetyltransferase, domain 2 Thivi_2539 IPR036291 NAD(P)-binding domain superfamily Thivi_2539 IPR012188 NAD(P)-dependent malic enzyme Thivi_2539 IPR012302 Malic enzyme, NAD-binding Thivi_2539 IPR012301 Malic enzyme, N-terminal domain Thivi_2539 IPR015884 Malic enzyme, conserved site Thivi_2539 IPR037062 Malic enzyme, N-terminal domain superfamily Thivi_2540 IPR003148 Regulator of K+ conductance, N-terminal Thivi_2540 IPR006037 Regulator of K+ conductance, C-terminal Thivi_2540 IPR036291 NAD(P)-binding domain superfamily Thivi_2540 IPR006036 Potassium uptake protein TrkA Thivi_2540 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_2541 IPR003445 Cation transporter Thivi_2541 IPR004772 TrkH potassium transport family Thivi_2542 IPR036974 PUA domain superfamily Thivi_2542 IPR001057 Glutamate/acetylglutamate kinase Thivi_2542 IPR002478 PUA domain Thivi_2542 IPR019797 Glutamate 5-kinase, conserved site Thivi_2542 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Thivi_2542 IPR011529 Glutamate 5-kinase Thivi_2542 IPR041739 Glutamate-5-kinase domain Thivi_2542 IPR001048 Aspartate/glutamate/uridylate kinase Thivi_2542 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2542 IPR015947 PUA-like superfamily Thivi_2543 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2543 IPR006073 GTP binding domain Thivi_2543 IPR036726 GTP1/OBG domain superfamily Thivi_2543 IPR006169 GTP1/OBG domain Thivi_2543 IPR006074 GTP1/OBG, conserved site Thivi_2543 IPR035101 GTP-binding protein, Obg-type Thivi_2543 IPR031167 OBG-type guanine nucleotide-binding (G) domain Thivi_2543 IPR014100 GTP-binding protein Obg/CgtA Thivi_2544 IPR018261 Ribosomal protein L27, conserved site Thivi_2544 IPR001684 Ribosomal protein L27 Thivi_2545 IPR036164 L21-like superfamily Thivi_2545 IPR028909 Ribosomal protein L21-like Thivi_2545 IPR018258 Ribosomal protein L21, conserved site Thivi_2545 IPR001787 Ribosomal protein L21 Thivi_2546 IPR008949 Isoprenoid synthase domain superfamily Thivi_2546 IPR000092 Polyprenyl synthetase Thivi_2546 IPR033749 Polyprenyl synthetase, conserved site Thivi_2549 IPR000160 GGDEF domain Thivi_2549 IPR001633 EAL domain Thivi_2549 IPR035919 EAL domain superfamily Thivi_2549 IPR005330 MHYT domain Thivi_2549 IPR029787 Nucleotide cyclase Thivi_2552 IPR001633 EAL domain Thivi_2552 IPR035919 EAL domain superfamily Thivi_2552 IPR000160 GGDEF domain Thivi_2552 IPR005330 MHYT domain Thivi_2552 IPR029787 Nucleotide cyclase Thivi_2556 IPR010383 Glycosyl hydrolase 94 Thivi_2556 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_2556 IPR037820 NdvB, GH94N domain 1 Thivi_2556 IPR037824 NdvB, GH94N domain 2 Thivi_2556 IPR012341 Six-hairpin glycosidase-like superfamily Thivi_2556 IPR033432 Glycosyl hydrolase 36, catalytic domain Thivi_2556 IPR009342 Putative carbohydrate binding domain Thivi_2556 IPR011013 Galactose mutarotase-like domain superfamily Thivi_2556 IPR019282 Domain of unknown function DUF2329 Thivi_2556 IPR008928 Six-hairpin glycosidase superfamily Thivi_2557 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2557 IPR007055 BON domain Thivi_2558 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2558 IPR007055 BON domain Thivi_2566 IPR004090 Chemotaxis methyl-accepting receptor Thivi_2566 IPR033480 Single Cache domain 2 Thivi_2566 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_2566 IPR003660 HAMP domain Thivi_2571 IPR036249 Thioredoxin-like superfamily Thivi_2571 IPR005746 Thioredoxin Thivi_2571 IPR013766 Thioredoxin domain Thivi_2571 IPR017937 Thioredoxin, conserved site Thivi_2573 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2573 IPR003660 HAMP domain Thivi_2573 IPR011006 CheY-like superfamily Thivi_2573 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2573 IPR001789 Signal transduction response regulator, receiver domain Thivi_2573 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2573 IPR005467 Histidine kinase domain Thivi_2573 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_2573 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2573 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2573 IPR036641 HPT domain superfamily Thivi_2573 IPR019247 Histidine kinase BarA, N-terminal Thivi_2574 IPR029787 Nucleotide cyclase Thivi_2574 IPR005330 MHYT domain Thivi_2574 IPR000160 GGDEF domain Thivi_2574 IPR035919 EAL domain superfamily Thivi_2574 IPR001633 EAL domain Thivi_2575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2575 IPR005467 Histidine kinase domain Thivi_2575 IPR015387 LuxQ, periplasmic Thivi_2575 IPR029151 Periplasmic sensor-like domain superfamily Thivi_2575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2575 IPR001789 Signal transduction response regulator, receiver domain Thivi_2575 IPR035965 PAS domain superfamily Thivi_2575 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2575 IPR011006 CheY-like superfamily Thivi_2575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2576 IPR035909 Methylesterase CheB, C-terminal Thivi_2576 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_2576 IPR000780 MCP methyltransferase, CheR-type Thivi_2576 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_2576 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2576 IPR013656 PAS fold-4 Thivi_2576 IPR035965 PAS domain superfamily Thivi_2576 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_2576 IPR000014 PAS domain Thivi_2582 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_2582 IPR036908 RlpA-like domain superfamily Thivi_2582 IPR012997 Rare lipoprotein A Thivi_2582 IPR036680 Sporulation-like domain superfamily Thivi_2582 IPR034718 Endolytic peptidoglycan transglycosylase RlpA Thivi_2582 IPR007730 Sporulation-like domain Thivi_2585 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2585 IPR003593 AAA+ ATPase domain Thivi_2585 IPR003439 ABC transporter-like Thivi_2585 IPR017871 ABC transporter, conserved site Thivi_2585 IPR015851 ABC transporter, NodI Thivi_2585 IPR005978 Nodulation ABC transporter, NodI Thivi_2586 IPR012675 Beta-grasp domain superfamily Thivi_2586 IPR003749 Sulfur carrier ThiS/MoaD-like Thivi_2586 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_2587 IPR036135 MoeA, N-terminal and linker domain superfamily Thivi_2587 IPR036425 MoaB/Mog-like domain superfamily Thivi_2587 IPR001453 MoaB/Mog domain Thivi_2587 IPR005110 MoeA, N-terminal and linker domain Thivi_2587 IPR038987 Molybdopterin biosynthesis protein MoeA-like Thivi_2587 IPR005111 MoeA, C-terminal, domain IV Thivi_2587 IPR036688 MoeA, C-terminal, domain IV superfamily Thivi_2587 IPR008284 Molybdenum cofactor biosynthesis, conserved site Thivi_2588 IPR001453 MoaB/Mog domain Thivi_2588 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria Thivi_2588 IPR012245 Molybdenum cofactor biosynthesis protein MoaB Thivi_2588 IPR008284 Molybdenum cofactor biosynthesis, conserved site Thivi_2588 IPR036425 MoaB/Mog-like domain superfamily Thivi_2589 IPR018357 Hexapeptide transferase, conserved site Thivi_2589 IPR025877 MobA-like NTP transferase Thivi_2589 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2589 IPR038009 GlmU, C-terminal LbH domain Thivi_2589 IPR001451 Hexapeptide repeat Thivi_2589 IPR011004 Trimeric LpxA-like superfamily Thivi_2589 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Thivi_2590 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_2591 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Thivi_2591 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit Thivi_2591 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal Thivi_2591 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Thivi_2591 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Thivi_2592 IPR005722 ATP synthase, F1 complex, beta subunit Thivi_2592 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2592 IPR003593 AAA+ ATPase domain Thivi_2592 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thivi_2592 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_2592 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Thivi_2592 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Thivi_2592 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Thivi_2593 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Thivi_2593 IPR000131 ATP synthase, F1 complex, gamma subunit Thivi_2593 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily Thivi_2594 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily Thivi_2594 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily Thivi_2594 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Thivi_2594 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thivi_2594 IPR005294 ATP synthase, F1 complex, alpha subunit Thivi_2594 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain Thivi_2594 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_2594 IPR000793 ATP synthase, alpha subunit, C-terminal Thivi_2594 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2594 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Thivi_2595 IPR000711 ATPase, OSCP/delta subunit Thivi_2595 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Thivi_2596 IPR005864 ATP synthase, F0 complex, subunit b, bacterial Thivi_2596 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Thivi_2596 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast Thivi_2597 IPR035921 F/V-ATP synthase subunit C superfamily Thivi_2597 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Thivi_2597 IPR002379 V-ATPase proteolipid subunit C-like domain Thivi_2597 IPR000454 ATP synthase, F0 complex, subunit C Thivi_2597 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast Thivi_2597 IPR038662 F1F0 ATP synthase subunit C superfamily Thivi_2598 IPR000568 ATP synthase, F0 complex, subunit A Thivi_2598 IPR035908 ATP synthase, F0 complex, subunit A superfamily Thivi_2598 IPR023011 ATP synthase, F0 complex, subunit A, active site Thivi_2600 IPR041468 ParB/Spo0J, HTH domain Thivi_2600 IPR004437 ParB/RepB/Spo0J partition protein Thivi_2600 IPR003115 ParB/Sulfiredoxin Thivi_2600 IPR036086 ParB/Sulfiredoxin superfamily Thivi_2601 IPR025669 AAA domain Thivi_2601 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2602 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2602 IPR003682 rRNA small subunit methyltransferase G Thivi_2603 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Thivi_2603 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related Thivi_2603 IPR020595 MnmG-related, conserved site Thivi_2603 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2603 IPR026904 GidA associated domain 3 Thivi_2604 IPR011703 ATPase, AAA-3 Thivi_2604 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2604 IPR041628 ChlI/MoxR, AAA lid domain Thivi_2605 IPR001789 Signal transduction response regulator, receiver domain Thivi_2605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2605 IPR005467 Histidine kinase domain Thivi_2605 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2605 IPR011006 CheY-like superfamily Thivi_2605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2605 IPR029151 Periplasmic sensor-like domain superfamily Thivi_2605 IPR015387 LuxQ, periplasmic Thivi_2607 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_2607 IPR004839 Aminotransferase, class I/classII Thivi_2607 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 Thivi_2607 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type Thivi_2607 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2607 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_2607 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thivi_2609 IPR011004 Trimeric LpxA-like superfamily Thivi_2609 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily Thivi_2609 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 Thivi_2609 IPR018357 Hexapeptide transferase, conserved site Thivi_2609 IPR001451 Hexapeptide repeat Thivi_2609 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family Thivi_2610 IPR006660 Arsenate reductase-like Thivi_2610 IPR036249 Thioredoxin-like superfamily Thivi_2610 IPR006504 Transcriptional regulator Spx/MgsR Thivi_2611 IPR011650 Peptidase M20, dimerisation domain Thivi_2611 IPR002933 Peptidase M20 Thivi_2611 IPR036264 Bacterial exopeptidase dimerisation domain Thivi_2611 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Thivi_2611 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria Thivi_2615 IPR004515 Phosphoheptose isomerase Thivi_2615 IPR035461 GmhA/DiaA Thivi_2615 IPR001347 Sugar isomerase (SIS) Thivi_2618 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2618 IPR024759 UvrB, YAD/RRR-motif-containing domain Thivi_2618 IPR041471 UvrB, interaction domain Thivi_2618 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2618 IPR004807 UvrABC system, subunit B Thivi_2618 IPR001650 Helicase, C-terminal Thivi_2618 IPR001943 UVR domain Thivi_2618 IPR006935 Helicase/UvrB, N-terminal Thivi_2618 IPR036876 UVR domain superfamily Thivi_2622 IPR003439 ABC transporter-like Thivi_2622 IPR003593 AAA+ ATPase domain Thivi_2622 IPR017871 ABC transporter, conserved site Thivi_2622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2623 IPR013525 ABC-2 type transporter Thivi_2623 IPR000412 ABC-2 transporter Thivi_2628 IPR031167 OBG-type guanine nucleotide-binding (G) domain Thivi_2628 IPR023192 TGS-like domain superfamily Thivi_2628 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Thivi_2628 IPR012675 Beta-grasp domain superfamily Thivi_2628 IPR006073 GTP binding domain Thivi_2628 IPR041706 YchF, N-terminal Thivi_2628 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2628 IPR004095 TGS Thivi_2628 IPR013029 YchF, C-terminal domain Thivi_2628 IPR012676 TGS-like Thivi_2629 IPR005835 Nucleotidyl transferase domain Thivi_2629 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2629 IPR014710 RmlC-like jelly roll fold Thivi_2629 IPR011051 RmlC-like cupin domain superfamily Thivi_2629 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Thivi_2629 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Thivi_2630 IPR022337 Inositol monophosphatase, SuhB Thivi_2630 IPR020550 Inositol monophosphatase, conserved site Thivi_2630 IPR033942 Inositol monophosphatase Thivi_2630 IPR000760 Inositol monophosphatase-like Thivi_2630 IPR020583 Inositol monophosphatase, metal-binding site Thivi_2632 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_2632 IPR001296 Glycosyl transferase, family 1 Thivi_2632 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL Thivi_2656 IPR036397 Ribonuclease H superfamily Thivi_2656 IPR025948 HTH-like domain Thivi_2656 IPR001584 Integrase, catalytic core Thivi_2656 IPR012337 Ribonuclease H-like superfamily Thivi_2666 IPR001518 Argininosuccinate synthase Thivi_2666 IPR018223 Argininosuccinate synthase, conserved site Thivi_2666 IPR023434 Argininosuccinate synthase, type 1 subfamily Thivi_2666 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Thivi_2666 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2667 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain Thivi_2667 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2667 IPR041166 LapB, rubredoxin metal binding domain Thivi_2667 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2667 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2667 IPR004504 DNA repair protein RadA Thivi_2667 IPR003593 AAA+ ATPase domain Thivi_2678 IPR017871 ABC transporter, conserved site Thivi_2678 IPR003439 ABC transporter-like Thivi_2678 IPR003593 AAA+ ATPase domain Thivi_2678 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2679 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2679 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2679 IPR001173 Glycosyltransferase 2-like Thivi_2682 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2682 IPR013216 Methyltransferase type 11 Thivi_2683 IPR036514 SGNH hydrolase superfamily Thivi_2683 IPR002656 Acyltransferase 3 Thivi_2684 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2684 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2684 IPR001173 Glycosyltransferase 2-like Thivi_2685 IPR001173 Glycosyltransferase 2-like Thivi_2685 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2686 IPR036291 NAD(P)-binding domain superfamily Thivi_2686 IPR016040 NAD(P)-binding domain Thivi_2686 IPR021295 Protein of unknown function DUF2867 Thivi_2688 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Thivi_2688 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2688 IPR004392 Hydrogenase maturation factor HypB Thivi_2688 IPR003593 AAA+ ATPase domain Thivi_2691 IPR000688 Hydrogenase maturation factor HypA/HybF Thivi_2693 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Thivi_2693 IPR029066 PLP-binding barrel Thivi_2693 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thivi_2693 IPR040634 Arginine decarboxylase, helical bundle domain Thivi_2693 IPR041128 Arginine decarboxylase, C-terminal helical Thivi_2693 IPR002985 Arginine decarboxylase Thivi_2693 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Thivi_2693 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thivi_2693 IPR000183 Ornithine/DAP/Arg decarboxylase Thivi_2694 IPR023743 Aquaporin Z Thivi_2694 IPR034294 Aquaporin transporter Thivi_2694 IPR000425 Major intrinsic protein Thivi_2694 IPR022357 Major intrinsic protein, conserved site Thivi_2694 IPR023271 Aquaporin-like Thivi_2695 IPR025526 DsrC-like domain superfamily Thivi_2695 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_2695 IPR042072 DsrC-like protein, C-terminal domain Thivi_2698 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_2698 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_2698 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_2698 IPR001821 [NiFe]-hydrogenase, small subunit Thivi_2698 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_2698 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_2698 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_2699 IPR036197 NarG-like superfamily Thivi_2701 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thivi_2701 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_2701 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_2702 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Thivi_2702 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Thivi_2703 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_2703 IPR010138 UDP-2,3-diacylglucosamine hydrolase Thivi_2705 IPR011701 Major facilitator superfamily Thivi_2705 IPR020846 Major facilitator superfamily domain Thivi_2705 IPR036259 MFS transporter superfamily Thivi_2706 IPR005330 MHYT domain Thivi_2706 IPR000160 GGDEF domain Thivi_2706 IPR035919 EAL domain superfamily Thivi_2706 IPR001633 EAL domain Thivi_2706 IPR029787 Nucleotide cyclase Thivi_2707 IPR036707 Cell division topological specificity factor MinE superfamily Thivi_2707 IPR005527 Cell division topological specificity factor MinE Thivi_2708 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2708 IPR025501 ATP binding protein MinD Thivi_2708 IPR010223 ATP binding protein MinD, bacterial-type Thivi_2708 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_2709 IPR005526 Septum formation inhibitor MinC, C-terminal Thivi_2709 IPR007874 Septum formation inhibitor MinC, N-terminal Thivi_2709 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily Thivi_2709 IPR013033 Septum formation inhibitor MinC Thivi_2709 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Thivi_2709 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Thivi_2710 IPR011146 HIT-like domain Thivi_2710 IPR019808 Histidine triad, conserved site Thivi_2710 IPR001310 Histidine triad (HIT) protein Thivi_2710 IPR036265 HIT-like superfamily Thivi_2711 IPR023627 Recombination protein RecR Thivi_2711 IPR023628 Recombination protein RecR, C4-type zinc finger Thivi_2711 IPR015967 Recombination protein RecR, conserved site Thivi_2711 IPR006171 TOPRIM domain Thivi_2711 IPR034137 RecR, TOPRIM domain Thivi_2711 IPR000093 DNA recombination protein RecR Thivi_2712 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Thivi_2712 IPR004401 Nucleoid-associated protein YbaB/EbfC family Thivi_2713 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily Thivi_2713 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2713 IPR001270 ClpA/B family Thivi_2713 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Thivi_2713 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV Thivi_2713 IPR022754 DNA polymerase III, gamma subunit, domain III Thivi_2713 IPR012763 DNA polymerase III, subunit gamma/ tau Thivi_2713 IPR021029 DNA polymerase III, tau subunit, domain V Thivi_2713 IPR003593 AAA+ ATPase domain Thivi_2715 IPR001057 Glutamate/acetylglutamate kinase Thivi_2715 IPR001048 Aspartate/glutamate/uridylate kinase Thivi_2715 IPR037528 Acetylglutamate kinase ArgB Thivi_2715 IPR004662 Acetylglutamate kinase family Thivi_2715 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2715 IPR041727 N-Acetyl-L-glutamate kinase, cyclic Thivi_2716 IPR012340 Nucleic acid-binding, OB-fold Thivi_2716 IPR019844 Cold-shock (CSD) domain Thivi_2716 IPR011129 Cold shock domain Thivi_2716 IPR012156 Cold shock, CspA Thivi_2716 IPR002059 Cold-shock protein, DNA-binding Thivi_2717 IPR033704 dUTPase, trimeric Thivi_2717 IPR036157 dUTPase-like superfamily Thivi_2717 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Thivi_2717 IPR029054 dUTPase-like Thivi_2718 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Thivi_2718 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Thivi_2718 IPR036551 Flavin prenyltransferase-like Thivi_2718 IPR003382 Flavoprotein Thivi_2718 IPR035929 CoaB-like superfamily Thivi_2719 IPR025657 RadC-like JAB domain Thivi_2719 IPR001405 Uncharacterised protein family UPF0758 Thivi_2719 IPR020891 Uncharacterised protein family UPF0758, conserved site Thivi_2719 IPR037518 MPN domain Thivi_2719 IPR010994 RuvA domain 2-like Thivi_2720 IPR033186 Helicase HerA-like C-terminal Thivi_2720 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2722 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Thivi_2722 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Thivi_2722 IPR029000 Cyclophilin-like domain superfamily Thivi_2722 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Thivi_2724 IPR015946 K homology domain-like, alpha/beta Thivi_2724 IPR032859 GTPase Der, C-terminal KH-domain-like Thivi_2724 IPR006073 GTP binding domain Thivi_2724 IPR016484 GTP-binding protein EngA Thivi_2724 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2724 IPR005225 Small GTP-binding protein domain Thivi_2724 IPR031166 EngA-type guanine nucleotide-binding (G) domain Thivi_2725 IPR002372 Pyrrolo-quinoline quinone repeat Thivi_2725 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 IPR015943 WD40/YVTN repeat-like-containing domain superfamily Thivi_2725 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Thivi_2725 IPR017687 Outer membrane protein assembly factor BamB Thivi_2726 IPR026039 Uncharacterised protein family UPF0070 Thivi_2726 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_2726 IPR018704 Tetratricopeptide repeat-like domain Thivi_2727 IPR006195 Aminoacyl-tRNA synthetase, class II Thivi_2727 IPR004154 Anticodon-binding Thivi_2727 IPR036621 Anticodon-binding domain superfamily Thivi_2727 IPR015807 Histidine-tRNA ligase Thivi_2727 IPR033656 Histidyl-anticodon-binding Thivi_2727 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Thivi_2727 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Thivi_2730 IPR027492 Dual-specificity RNA methyltransferase RlmN Thivi_2730 IPR040072 Methyltransferase (Class A) Thivi_2730 IPR007197 Radical SAM Thivi_2730 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Thivi_2730 IPR013785 Aldolase-type TIM barrel Thivi_2731 IPR001564 Nucleoside diphosphate kinase Thivi_2731 IPR036850 Nucleoside diphosphate kinase-like domain superfamily Thivi_2731 IPR034907 Nucleoside diphosphate kinase-like domain Thivi_2734 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2734 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2734 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific Thivi_2736 IPR004952 Uncharacterised protein family UPF0460 Thivi_2737 IPR026268 Protein RseC Thivi_2737 IPR007359 Positive regulator of sigma(E), RseC/MucC Thivi_2738 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_2738 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2738 IPR034169 NifX-like domain Thivi_2739 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2739 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein Thivi_2739 IPR000318 Nitrogenase component 1, conserved site Thivi_2740 IPR000318 Nitrogenase component 1, conserved site Thivi_2740 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Thivi_2740 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_2741 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2741 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_2741 IPR023753 FAD/NAD(P)-binding domain Thivi_2741 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thivi_2743 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Thivi_2743 IPR002934 Polymerase, nucleotidyl transferase domain Thivi_2743 IPR003607 HD/PDEase domain Thivi_2743 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme Thivi_2743 IPR006674 HD domain Thivi_2743 IPR002912 ACT domain Thivi_2744 IPR001714 Peptidase M24, methionine aminopeptidase Thivi_2744 IPR000994 Peptidase M24 Thivi_2744 IPR036005 Creatinase/aminopeptidase-like Thivi_2744 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Thivi_2745 IPR018130 Ribosomal protein S2, conserved site Thivi_2745 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Thivi_2745 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Thivi_2745 IPR001865 Ribosomal protein S2 Thivi_2746 IPR036402 Elongation factor Ts, dimerisation domain superfamily Thivi_2746 IPR009060 UBA-like superfamily Thivi_2746 IPR018101 Translation elongation factor Ts, conserved site Thivi_2746 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Thivi_2746 IPR001816 Translation elongation factor EFTs/EF1B Thivi_2747 IPR001048 Aspartate/glutamate/uridylate kinase Thivi_2747 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2747 IPR015963 Uridylate kinase, bacteria Thivi_2747 IPR011817 Uridylate kinase Thivi_2748 IPR002661 Ribosome recycling factor Thivi_2748 IPR036191 RRF superfamily Thivi_2748 IPR023584 Ribosome recycling factor domain Thivi_2749 IPR001441 Decaprenyl diphosphate synthase-like Thivi_2749 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Thivi_2749 IPR036424 Decaprenyl diphosphate synthase-like superfamily Thivi_2750 IPR000374 Phosphatidate cytidylyltransferase Thivi_2751 IPR036169 DXP reductoisomerase, C-terminal domain superfamily Thivi_2751 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Thivi_2751 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Thivi_2751 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Thivi_2751 IPR036291 NAD(P)-binding domain superfamily Thivi_2751 IPR026877 DXP reductoisomerase C-terminal domain Thivi_2752 IPR041489 PDZ domain 6 Thivi_2752 IPR001478 PDZ domain Thivi_2752 IPR036034 PDZ superfamily Thivi_2752 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Thivi_2752 IPR008915 Peptidase M50 Thivi_2753 IPR000184 Bacterial surface antigen (D15) Thivi_2753 IPR010827 POTRA domain, BamA/TamA-like Thivi_2753 IPR039910 Surface antigen D15-like Thivi_2753 IPR023707 Outer membrane protein assembly factor BamA Thivi_2753 IPR034746 POTRA domain Thivi_2755 IPR018357 Hexapeptide transferase, conserved site Thivi_2755 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD Thivi_2755 IPR001451 Hexapeptide repeat Thivi_2755 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region Thivi_2755 IPR011004 Trimeric LpxA-like superfamily Thivi_2756 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Thivi_2756 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Thivi_2756 IPR029069 HotDog domain superfamily Thivi_2757 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal Thivi_2757 IPR011004 Trimeric LpxA-like superfamily Thivi_2757 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Thivi_2757 IPR001451 Hexapeptide repeat Thivi_2757 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily Thivi_2758 IPR003835 Glycosyl transferase, family 19 Thivi_2759 IPR036397 Ribonuclease H superfamily Thivi_2759 IPR012337 Ribonuclease H-like superfamily Thivi_2759 IPR024567 Ribonuclease HII/HIII domain Thivi_2759 IPR001352 Ribonuclease HII/HIII Thivi_2759 IPR022898 Ribonuclease HII Thivi_2761 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2761 IPR001482 Type II/IV secretion system protein Thivi_2761 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_2761 IPR013369 Type II secretion system GspE Thivi_2761 IPR042181 Type II secretion system, protein E, N-terminal Thivi_2765 IPR001633 EAL domain Thivi_2765 IPR029787 Nucleotide cyclase Thivi_2765 IPR035919 EAL domain superfamily Thivi_2765 IPR005330 MHYT domain Thivi_2765 IPR000160 GGDEF domain Thivi_2766 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2766 IPR001036 Acriflavin resistance protein Thivi_2767 IPR006143 RND efflux pump, membrane fusion protein Thivi_2767 IPR022824 Multidrug resistance protein MdtA Thivi_2767 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_2769 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thivi_2769 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_2769 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_2769 IPR002888 [2Fe-2S]-binding Thivi_2769 IPR036884 [2Fe-2S]-binding domain superfamily Thivi_2770 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Thivi_2770 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_2770 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Thivi_2770 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily Thivi_2770 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding Thivi_2770 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Thivi_2772 IPR006219 DHAP synthase, class 1 Thivi_2772 IPR006218 DAHP synthetase I/KDSA Thivi_2772 IPR013785 Aldolase-type TIM barrel Thivi_2776 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal Thivi_2776 IPR012675 Beta-grasp domain superfamily Thivi_2776 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_2776 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2776 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2776 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein Thivi_2776 IPR009051 Alpha-helical ferredoxin Thivi_2777 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Thivi_2777 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thivi_2777 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site Thivi_2777 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2777 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Thivi_2777 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Thivi_2777 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria Thivi_2778 IPR011138 Succinate dehydrogenase cytochrome b558 subunit Thivi_2778 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit Thivi_2778 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute Thivi_2778 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit Thivi_2780 IPR003444 Transcriptional regulator MraZ Thivi_2780 IPR035644 MraZ, C-terminal Thivi_2780 IPR020603 MraZ domain Thivi_2780 IPR035642 MraZ, N-terminal Thivi_2780 IPR038619 MraZ superfamily Thivi_2780 IPR007159 SpoVT-AbrB domain Thivi_2780 IPR037914 SpoVT-AbrB domain superfamily Thivi_2781 IPR002575 Aminoglycoside phosphotransferase Thivi_2781 IPR011009 Protein kinase-like domain superfamily Thivi_2782 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2782 IPR036291 NAD(P)-binding domain superfamily Thivi_2782 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Thivi_2783 IPR000715 Glycosyl transferase, family 4 Thivi_2783 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Thivi_2784 IPR006287 Protein/nucleic acid deglycase DJ-1 Thivi_2784 IPR002818 DJ-1/PfpI Thivi_2784 IPR029062 Class I glutamine amidotransferase-like Thivi_2785 IPR029045 ClpP/crotonase-like domain superfamily Thivi_2785 IPR001478 PDZ domain Thivi_2785 IPR005151 Tail specific protease Thivi_2785 IPR036034 PDZ superfamily Thivi_2785 IPR004447 C-terminal-processing peptidase S41A Thivi_2786 IPR016047 Peptidase M23 Thivi_2786 IPR011055 Duplicated hybrid motif Thivi_2787 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2787 IPR001845 HTH ArsR-type DNA-binding domain Thivi_2787 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2787 IPR011991 ArsR-like helix-turn-helix domain Thivi_2789 IPR035958 SecB-like superfamily Thivi_2789 IPR003708 Bacterial protein export chaperone SecB Thivi_2790 IPR036291 NAD(P)-binding domain superfamily Thivi_2790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_2790 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Thivi_2790 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Thivi_2790 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Thivi_2790 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Thivi_2791 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Thivi_2791 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thivi_2791 IPR029028 Alpha/beta knot methyltransferases Thivi_2791 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_2794 IPR025944 Sigma-54 interaction domain, conserved site Thivi_2794 IPR010114 DNA-binding transcriptional regulator NtrC Thivi_2794 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_2794 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2794 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_2794 IPR002197 DNA binding HTH domain, Fis-type Thivi_2794 IPR009057 Homeobox-like domain superfamily Thivi_2794 IPR011006 CheY-like superfamily Thivi_2794 IPR003593 AAA+ ATPase domain Thivi_2794 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_2794 IPR001789 Signal transduction response regulator, receiver domain Thivi_2795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_2795 IPR005467 Histidine kinase domain Thivi_2795 IPR013767 PAS fold Thivi_2795 IPR035965 PAS domain superfamily Thivi_2795 IPR000014 PAS domain Thivi_2795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_2795 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_2797 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thivi_2797 IPR008146 Glutamine synthetase, catalytic domain Thivi_2797 IPR027303 Glutamine synthetase, glycine-rich site Thivi_2797 IPR004809 Glutamine synthetase type I Thivi_2797 IPR001637 Glutamine synthetase class-I, adenylation site Thivi_2797 IPR027302 Glutamine synthetase, N-terminal conserved site Thivi_2797 IPR008147 Glutamine synthetase, beta-Grasp domain Thivi_2797 IPR036651 Glutamine synthetase, N-terminal domain superfamily Thivi_2798 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thivi_2798 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2798 IPR001036 Acriflavin resistance protein Thivi_2799 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2799 IPR006143 RND efflux pump, membrane fusion protein Thivi_2800 IPR003439 ABC transporter-like Thivi_2800 IPR017871 ABC transporter, conserved site Thivi_2800 IPR000253 Forkhead-associated (FHA) domain Thivi_2800 IPR003593 AAA+ ATPase domain Thivi_2800 IPR008984 SMAD/FHA domain superfamily Thivi_2800 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2800 IPR013525 ABC-2 type transporter Thivi_2801 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2801 IPR001036 Acriflavin resistance protein Thivi_2801 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thivi_2802 IPR006143 RND efflux pump, membrane fusion protein Thivi_2802 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2803 IPR011704 ATPase, dynein-related, AAA domain Thivi_2803 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2803 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_2805 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2806 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_2806 IPR021135 Phosphoenolpyruvate carboxylase Thivi_2806 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type Thivi_2806 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site Thivi_2810 IPR037914 SpoVT-AbrB domain superfamily Thivi_2810 IPR007159 SpoVT-AbrB domain Thivi_2812 IPR000477 Reverse transcriptase domain Thivi_2821 IPR006122 Heavy metal-associated domain, copper ion-binding Thivi_2821 IPR018303 P-type ATPase, phosphorylation site Thivi_2821 IPR036163 Heavy metal-associated domain superfamily Thivi_2821 IPR027256 P-type ATPase, subfamily IB Thivi_2821 IPR001757 P-type ATPase Thivi_2821 IPR017969 Heavy-metal-associated, conserved site Thivi_2821 IPR023214 HAD superfamily Thivi_2821 IPR008250 P-type ATPase, A domain superfamily Thivi_2821 IPR023298 P-type ATPase, transmembrane domain superfamily Thivi_2821 IPR006121 Heavy metal-associated domain, HMA Thivi_2821 IPR023299 P-type ATPase, cytoplasmic domain N Thivi_2821 IPR036412 HAD-like superfamily Thivi_2826 IPR036653 CinA-like, C-terminal Thivi_2826 IPR008136 CinA, C-terminal Thivi_2826 IPR041424 CinA, KH domain Thivi_2826 IPR008135 Competence-induced protein CinA Thivi_2826 IPR036425 MoaB/Mog-like domain superfamily Thivi_2826 IPR001453 MoaB/Mog domain Thivi_2828 IPR042094 Type II secretion system F domain superfamily Thivi_2828 IPR018076 Type II secretion system F domain Thivi_2828 IPR001992 Type II secretion system conserved site Thivi_2828 IPR003004 GspF/PilC family Thivi_2830 IPR036412 HAD-like superfamily Thivi_2830 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Thivi_2830 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase Thivi_2830 IPR006543 Histidinol-phosphate phosphatase Thivi_2830 IPR023214 HAD superfamily Thivi_2831 IPR006194 Glycine-tRNA synthetase, heterodimeric Thivi_2831 IPR015944 Glycine-tRNA ligase, beta subunit Thivi_2831 IPR008909 DALR anticodon binding Thivi_2832 IPR002310 Glycine-tRNA ligase, alpha subunit Thivi_2832 IPR006194 Glycine-tRNA synthetase, heterodimeric Thivi_2833 IPR010292 Uncharacterised protein family CreA Thivi_2837 IPR022890 Ferredoxin--NADP reductase, type 2 Thivi_2837 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2837 IPR023753 FAD/NAD(P)-binding domain Thivi_2840 IPR001633 EAL domain Thivi_2840 IPR035919 EAL domain superfamily Thivi_2840 IPR000160 GGDEF domain Thivi_2840 IPR005330 MHYT domain Thivi_2840 IPR029787 Nucleotide cyclase Thivi_2842 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal Thivi_2842 IPR022637 DNA polymerase III, beta sliding clamp, central Thivi_2842 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal Thivi_2842 IPR001001 DNA polymerase III, beta sliding clamp Thivi_2843 IPR038454 DnaA, N-terminal domain superfamily Thivi_2843 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Thivi_2843 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 IPR001957 Chromosomal replication control, initiator DnaA Thivi_2843 IPR003593 AAA+ ATPase domain Thivi_2843 IPR013317 Chromosomal replication initiator protein DnaA Thivi_2843 IPR013159 Chromosomal replication initiator, DnaA C-terminal Thivi_2843 IPR024633 DnaA N-terminal domain Thivi_2843 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2843 IPR010921 Trp repressor/replication initiator Thivi_2845 IPR034739 UvrD/AddA helicase, N-terminal Thivi_2845 IPR014016 UvrD-like helicase, ATP-binding domain Thivi_2845 IPR005753 DNA helicase, ATP-dependent, UvrD type Thivi_2845 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2845 IPR000212 DNA helicase, UvrD/REP type Thivi_2845 IPR014017 UvrD-like DNA helicase, C-terminal Thivi_2845 IPR013986 DExx box DNA helicase domain superfamily Thivi_2846 IPR012340 Nucleic acid-binding, OB-fold Thivi_2846 IPR022967 RNA-binding domain, S1 Thivi_2846 IPR003029 S1 domain Thivi_2847 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2847 IPR007197 Radical SAM Thivi_2847 IPR004559 Heme chaperone HemW-like Thivi_2847 IPR034505 Anaerobic coproporphyrinogen-III oxidase Thivi_2847 IPR006638 Elp3/MiaB/NifB Thivi_2847 IPR010723 HemN, C-terminal Thivi_2848 IPR027491 Ribosomal protein L31 type A Thivi_2848 IPR034704 L28p-like Thivi_2848 IPR042105 Ribosomal protein L31 superfamily Thivi_2848 IPR002150 Ribosomal protein L31 Thivi_2850 IPR016142 Citrate synthase-like, large alpha subdomain Thivi_2850 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_2850 IPR019810 Citrate synthase active site Thivi_2850 IPR024176 Citrate synthase, bacterial-type Thivi_2850 IPR036969 Citrate synthase superfamily Thivi_2850 IPR010953 Citrate synthase, type I Thivi_2850 IPR002020 Citrate synthase Thivi_2856 IPR021731 AMIN domain Thivi_2856 IPR038591 NolW-like superfamily Thivi_2856 IPR005644 NolW-like Thivi_2856 IPR013355 Type IV pilus secretin PilQ Thivi_2856 IPR001775 GspD/PilQ family Thivi_2856 IPR011662 Secretin/TonB, short N-terminal domain Thivi_2856 IPR004846 Type II/III secretion system Thivi_2856 IPR004845 Type II secretion system GspD, conserved site Thivi_2858 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2858 IPR023000 Shikimate kinase, conserved site Thivi_2858 IPR000623 Shikimate kinase/Threonine synthase-like 1 Thivi_2858 IPR031322 Shikimate kinase/gluconokinase Thivi_2859 IPR030960 3-dehydroquinate synthase domain Thivi_2859 IPR030963 3-dehydroquinate synthase family Thivi_2859 IPR016037 3-dehydroquinate synthase AroB Thivi_2860 IPR017932 Glutamine amidotransferase type 2 domain Thivi_2860 IPR002489 Glutamate synthase, alpha subunit, C-terminal Thivi_2860 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily Thivi_2860 IPR002932 Glutamate synthase domain Thivi_2860 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2860 IPR013785 Aldolase-type TIM barrel Thivi_2860 IPR006982 Glutamate synthase, central-N Thivi_2861 IPR009051 Alpha-helical ferredoxin Thivi_2861 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2861 IPR023753 FAD/NAD(P)-binding domain Thivi_2861 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Thivi_2861 IPR028261 Dihydroprymidine dehydrogenase domain II Thivi_2863 IPR001482 Type II/IV secretion system protein Thivi_2863 IPR003593 AAA+ ATPase domain Thivi_2863 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2863 IPR006321 Pilus retraction protein PilT Thivi_2864 IPR001482 Type II/IV secretion system protein Thivi_2864 IPR003593 AAA+ ATPase domain Thivi_2864 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2864 IPR006321 Pilus retraction protein PilT Thivi_2865 IPR004846 Type II/III secretion system Thivi_2865 IPR013356 Type II secretion system GspD Thivi_2865 IPR004845 Type II secretion system GspD, conserved site Thivi_2865 IPR038591 NolW-like superfamily Thivi_2865 IPR005644 NolW-like Thivi_2865 IPR001775 GspD/PilQ family Thivi_2868 IPR007813 Fimbrial assembly PilN Thivi_2869 IPR005628 General secretion pathway protein K Thivi_2869 IPR038072 GspK, central domain superfamily Thivi_2871 IPR010052 Type II secretion system protein I Thivi_2871 IPR012902 Prokaryotic N-terminal methylation site Thivi_2873 IPR010054 General secretion pathway protein G Thivi_2873 IPR013545 Type II secretion system protein G Thivi_2873 IPR012902 Prokaryotic N-terminal methylation site Thivi_2873 IPR000983 Bacterial general secretion pathway protein G-type pilin Thivi_2874 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_2874 IPR004546 Restriction endonuclease, type I, HsdM Thivi_2874 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_2874 IPR003356 DNA methylase, adenine-specific Thivi_2874 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_2874 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2876 IPR016181 Acyl-CoA N-acyltransferase Thivi_2891 IPR004815 Lon protease, bacterial/eukaryotic-type Thivi_2891 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2891 IPR003593 AAA+ ATPase domain Thivi_2891 IPR003959 ATPase, AAA-type, core Thivi_2891 IPR027543 Lon protease, bacterial Thivi_2891 IPR008269 Peptidase S16, Lon proteolytic domain Thivi_2891 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2891 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2891 IPR008268 Peptidase S16, active site Thivi_2891 IPR027065 Lon protease Thivi_2891 IPR003111 Lon, substrate-binding domain Thivi_2891 IPR015947 PUA-like superfamily Thivi_2894 IPR038071 UROD/MetE-like superfamily Thivi_2894 IPR006361 Uroporphyrinogen decarboxylase HemE Thivi_2894 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Thivi_2895 IPR005226 UPF0014 family Thivi_2896 IPR003593 AAA+ ATPase domain Thivi_2896 IPR003439 ABC transporter-like Thivi_2896 IPR017871 ABC transporter, conserved site Thivi_2896 IPR015853 ABC transporter, ferric cation import, FbpC Thivi_2896 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2896 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2896 IPR013611 Transport-associated OB, type 2 Thivi_2897 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type Thivi_2897 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2898 IPR013785 Aldolase-type TIM barrel Thivi_2898 IPR033983 Thiazole synthase ThiG Thivi_2898 IPR008867 Thiazole synthase Thivi_2900 IPR005836 ADP-glucose pyrophosphorylase, conserved site Thivi_2900 IPR005835 Nucleotidyl transferase domain Thivi_2900 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2900 IPR011004 Trimeric LpxA-like superfamily Thivi_2900 IPR011831 Glucose-1-phosphate adenylyltransferase Thivi_2900 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Thivi_2901 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta Thivi_2901 IPR037439 1,4-alpha-glucan-branching enzyme Thivi_2901 IPR004193 Glycoside hydrolase, family 13, N-terminal Thivi_2901 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Thivi_2901 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_2901 IPR013780 Glycosyl hydrolase, all-beta Thivi_2901 IPR017853 Glycoside hydrolase superfamily Thivi_2901 IPR013783 Immunoglobulin-like fold Thivi_2901 IPR014756 Immunoglobulin E-set Thivi_2902 IPR003791 Protein of unknown function UPF0178 Thivi_2904 IPR003448 Molybdopterin biosynthesis MoaE Thivi_2904 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily Thivi_2905 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2905 IPR001241 DNA topoisomerase, type IIA Thivi_2905 IPR041423 DNA gyrase subunit B insert domain Thivi_2905 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Thivi_2905 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Thivi_2905 IPR018522 DNA topoisomerase, type IIA, conserved site Thivi_2905 IPR006171 TOPRIM domain Thivi_2905 IPR034160 DNA gyrase subunit B, TOPRIM domain Thivi_2905 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2905 IPR002288 DNA gyrase B subunit, C-terminal Thivi_2905 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Thivi_2905 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2905 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2905 IPR011557 DNA gyrase, subunit B Thivi_2908 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_2908 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thivi_2909 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thivi_2909 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Thivi_2909 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Thivi_2909 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_2909 IPR001135 NADH-quinone oxidoreductase, subunit D Thivi_2910 IPR003918 NADH:ubiquinone oxidoreductase Thivi_2910 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_2911 IPR038730 Hydrogenase-4 component E-like Thivi_2912 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thivi_2912 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Thivi_2913 IPR003918 NADH:ubiquinone oxidoreductase Thivi_2913 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_2915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2915 IPR030374 Polyamine biosynthesis domain Thivi_2915 IPR030373 Polyamine biosynthesis domain, conserved site Thivi_2915 IPR001045 Spermidine/spermine synthases Thivi_2915 IPR035246 Spermidine synthase, tetramerisation domain Thivi_2915 IPR037163 Spermidine synthase, tetramerisation domain superfamily Thivi_2917 IPR023214 HAD superfamily Thivi_2917 IPR036412 HAD-like superfamily Thivi_2917 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Thivi_2921 IPR011392 Tellurite resistance, TerY Thivi_2921 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2921 IPR002035 von Willebrand factor, type A Thivi_2923 IPR022369 Integral membrane protein TerC, riboswitch-linked Thivi_2923 IPR005496 Integral membrane protein TerC Thivi_2924 IPR003607 HD/PDEase domain Thivi_2931 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Thivi_2931 IPR023165 rRNA adenine dimethylase-like Thivi_2931 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Thivi_2931 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Thivi_2931 IPR011530 Ribosomal RNA adenine dimethylase Thivi_2931 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2932 IPR013785 Aldolase-type TIM barrel Thivi_2932 IPR018225 Transaldolase, active site Thivi_2932 IPR001585 Transaldolase/Fructose-6-phosphate aldolase Thivi_2932 IPR004730 Transaldolase type 1 Thivi_2946 IPR003346 Transposase, IS116/IS110/IS902 Thivi_2946 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Thivi_2957 IPR005133 Na+/H+ antiporter subunit G Thivi_2958 IPR007208 Na(+)/H(+) antiporter subunit F-like Thivi_2960 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_2960 IPR004775 Na(+)/H(+) antiporter subunit D1 Thivi_2961 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_2961 IPR006673 Mnh complex subunit C1 Thivi_2962 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Thivi_2962 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thivi_2962 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_2962 IPR005663 Monovalent cation proton antiporter subunit A Thivi_2962 IPR005281 Monovalent cation:proton antiporter, subunit B Thivi_2962 IPR025383 Domain of unknown function DUF4040 Thivi_2966 IPR002559 Transposase, IS4-like Thivi_2966 IPR032806 H repeat-associated protein, N-terminal Thivi_2970 IPR041597 L,D-transpeptidase C-terminal domain Thivi_2970 IPR005490 L,D-transpeptidase catalytic domain Thivi_2970 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_2971 IPR005517 Translation elongation factor EFG/EF2, domain IV Thivi_2971 IPR000640 Elongation factor EFG, domain V-like Thivi_2971 IPR004540 Translation elongation factor EFG/EF2 Thivi_2971 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_2971 IPR005225 Small GTP-binding protein domain Thivi_2971 IPR035649 EFG, domain V Thivi_2971 IPR035647 EF-G domain III/V-like Thivi_2971 IPR009022 Elongation factor G, domain III Thivi_2971 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2971 IPR041095 Elongation Factor G, domain II Thivi_2971 IPR000795 Transcription factor, GTP-binding domain Thivi_2971 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2971 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2971 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2971 IPR031157 Tr-type G domain, conserved site Thivi_2972 IPR029787 Nucleotide cyclase Thivi_2972 IPR000160 GGDEF domain Thivi_2972 IPR009050 Globin-like superfamily Thivi_2972 IPR012292 Globin/Protoglobin Thivi_2972 IPR039435 Diguanylate cyclase DosC, globin sensor domain Thivi_2974 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Thivi_2974 IPR036874 Carbonic anhydrase superfamily Thivi_2974 IPR001765 Carbonic anhydrase Thivi_2976 IPR003782 Copper chaperone SCO1/SenC Thivi_2976 IPR036249 Thioredoxin-like superfamily Thivi_2978 IPR024167 Cytochrome c4-like Thivi_2978 IPR008168 Cytochrome c, class IC Thivi_2978 IPR009056 Cytochrome c-like domain Thivi_2978 IPR036909 Cytochrome c-like domain superfamily Thivi_2984 IPR004513 Cell division protein FtsX Thivi_2984 IPR040690 FtsX, extracellular domain Thivi_2985 IPR005286 Cell division protein FtsE, ATP-binding Thivi_2985 IPR003439 ABC transporter-like Thivi_2985 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2985 IPR003593 AAA+ ATPase domain Thivi_2985 IPR017871 ABC transporter, conserved site Thivi_2986 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily Thivi_2986 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thivi_2986 IPR036225 SRP/SRP receptor, N-terminal Thivi_2986 IPR004390 Signal-recognition particle receptor FtsY Thivi_2986 IPR003593 AAA+ ATPase domain Thivi_2986 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2986 IPR013822 Signal recognition particle SRP54, helical bundle Thivi_2987 IPR035919 EAL domain superfamily Thivi_2987 IPR000160 GGDEF domain Thivi_2987 IPR005330 MHYT domain Thivi_2987 IPR029787 Nucleotide cyclase Thivi_2987 IPR001633 EAL domain Thivi_2988 IPR013656 PAS fold-4 Thivi_2988 IPR035965 PAS domain superfamily Thivi_2988 IPR000014 PAS domain Thivi_2988 IPR035909 Methylesterase CheB, C-terminal Thivi_2988 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2988 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_2988 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_2988 IPR000780 MCP methyltransferase, CheR-type Thivi_2988 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_2989 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2989 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2989 IPR002550 CNNM, transmembrane domain Thivi_2989 IPR000644 CBS domain Thivi_2989 IPR005170 Transporter-associated domain Thivi_2990 IPR005170 Transporter-associated domain Thivi_2990 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2990 IPR000644 CBS domain Thivi_2990 IPR002550 CNNM, transmembrane domain Thivi_2990 IPR036318 FAD-binding, type PCMH-like superfamily Thivi_2991 IPR009875 PilZ domain Thivi_2991 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2991 IPR001173 Glycosyltransferase 2-like Thivi_2991 IPR003919 Cellulose synthase, subunit A Thivi_2993 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2993 IPR000101 Gamma-glutamyltranspeptidase Thivi_2994 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2994 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2995 IPR001980 Phosphopantetheine adenylyltransferase Thivi_2995 IPR004821 Cytidyltransferase-like domain Thivi_2997 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2997 IPR004398 RNA methyltransferase, RsmD Thivi_2997 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_2998 IPR007863 Peptidase M16, C-terminal Thivi_2998 IPR001431 Peptidase M16, zinc-binding site Thivi_2998 IPR011765 Peptidase M16, N-terminal Thivi_2998 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Thivi_2999 IPR007863 Peptidase M16, C-terminal Thivi_2999 IPR001431 Peptidase M16, zinc-binding site Thivi_2999 IPR011765 Peptidase M16, N-terminal Thivi_2999 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Thivi_3000 IPR013656 PAS fold-4 Thivi_3000 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3000 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3000 IPR011006 CheY-like superfamily Thivi_3000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3000 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3000 IPR005467 Histidine kinase domain Thivi_3000 IPR000700 PAS-associated, C-terminal Thivi_3000 IPR035965 PAS domain superfamily Thivi_3000 IPR001610 PAC motif Thivi_3000 IPR000014 PAS domain Thivi_3000 IPR001789 Signal transduction response regulator, receiver domain Thivi_3000 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3002 IPR013369 Type II secretion system GspE Thivi_3002 IPR003593 AAA+ ATPase domain Thivi_3002 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3002 IPR001482 Type II/IV secretion system protein Thivi_3002 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_3002 IPR007831 General secretory system II, protein E, N-terminal Thivi_3002 IPR042181 Type II secretion system, protein E, N-terminal Thivi_3003 IPR005719 Dihydroorotate dehydrogenase, class 2 Thivi_3003 IPR001295 Dihydroorotate dehydrogenase, conserved site Thivi_3003 IPR013785 Aldolase-type TIM barrel Thivi_3003 IPR005720 Dihydroorotate dehydrogenase domain Thivi_3003 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Thivi_3005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3005 IPR000100 Ribonuclease P Thivi_3005 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3006 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3007 IPR038221 YidC, periplasmic domain superfamily Thivi_3007 IPR038210 Membrane insertase YidC, periplasmic domain Thivi_3007 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 Thivi_3007 IPR028053 Membrane insertase YidC, N-terminal Thivi_3007 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Thivi_3007 IPR019998 Membrane insertase YidC Thivi_3008 IPR005225 Small GTP-binding protein domain Thivi_3008 IPR027368 tRNA modification GTPase MnmE domain 2 Thivi_3008 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3008 IPR004520 tRNA modification GTPase MnmE Thivi_3008 IPR025867 MnmE, helical domain Thivi_3008 IPR018948 GTP-binding protein TrmE, N-terminal Thivi_3008 IPR031168 TrmE-type guanine nucleotide-binding domain Thivi_3008 IPR006073 GTP binding domain Thivi_3008 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Thivi_3013 IPR002559 Transposase, IS4-like Thivi_3013 IPR032806 H repeat-associated protein, N-terminal Thivi_3025 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_3025 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Thivi_3025 IPR018146 Glyoxalase I, conserved site Thivi_3025 IPR037523 Vicinal oxygen chelate (VOC) domain Thivi_3025 IPR004361 Glyoxalase I Thivi_3027 IPR001460 Penicillin-binding protein, transpeptidase Thivi_3027 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3027 IPR002137 Beta-lactamase, class-D active site Thivi_3029 IPR010384 MtfA family Thivi_3029 IPR024079 Metallopeptidase, catalytic domain superfamily Thivi_3029 IPR042252 MtfA, N-terminal Thivi_3031 IPR014710 RmlC-like jelly roll fold Thivi_3031 IPR003829 Pirin, N-terminal domain Thivi_3031 IPR012093 Pirin Thivi_3031 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain Thivi_3031 IPR011051 RmlC-like cupin domain superfamily Thivi_3032 IPR036291 NAD(P)-binding domain superfamily Thivi_3032 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_3032 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3037 IPR031312 Sodium/sulphate symporter, conserved site Thivi_3037 IPR006037 Regulator of K+ conductance, C-terminal Thivi_3037 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_3037 IPR004680 Citrate transporter-like domain Thivi_3038 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Thivi_3038 IPR034904 Fe-S cluster assembly domain superfamily Thivi_3038 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3038 IPR000808 Mrp, conserved site Thivi_3038 IPR019591 Mrp/NBP35 ATP-binding protein Thivi_3039 IPR005330 MHYT domain Thivi_3039 IPR001633 EAL domain Thivi_3039 IPR035965 PAS domain superfamily Thivi_3039 IPR000014 PAS domain Thivi_3039 IPR029787 Nucleotide cyclase Thivi_3039 IPR035919 EAL domain superfamily Thivi_3039 IPR000160 GGDEF domain Thivi_3040 IPR036157 dUTPase-like superfamily Thivi_3040 IPR029054 dUTPase-like Thivi_3040 IPR011962 dCTP deaminase Thivi_3040 IPR033704 dUTPase, trimeric Thivi_3043 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_3043 IPR001296 Glycosyl transferase, family 1 Thivi_3046 IPR011864 Phosphate ABC transporter, permease protein PstC Thivi_3046 IPR035906 MetI-like superfamily Thivi_3046 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_3047 IPR035906 MetI-like superfamily Thivi_3047 IPR005672 Phosphate transport system permease protein PstA Thivi_3047 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_3048 IPR005670 Phosphate transport system permease protein 1 Thivi_3048 IPR003593 AAA+ ATPase domain Thivi_3048 IPR017871 ABC transporter, conserved site Thivi_3048 IPR003439 ABC transporter-like Thivi_3048 IPR015850 ABC transporter, phosphate import, PstB Thivi_3048 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3049 IPR026022 PhoU domain Thivi_3049 IPR038078 PhoU-like domain superfamily Thivi_3049 IPR028366 Phosphate transport system protein PhoU Thivi_3052 IPR017782 Hydroxyacylglutathione hydrolase Thivi_3052 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain Thivi_3052 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_3052 IPR001279 Metallo-beta-lactamase Thivi_3052 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain Thivi_3053 IPR013815 ATP-grasp fold, subdomain 1 Thivi_3053 IPR040442 Pyruvate kinase-like domain superfamily Thivi_3053 IPR010121 Pyruvate, phosphate dikinase Thivi_3053 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Thivi_3053 IPR036637 Phosphohistidine domain superfamily Thivi_3053 IPR023151 PEP-utilising enzyme, conserved site Thivi_3053 IPR000121 PEP-utilising enzyme, C-terminal Thivi_3053 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_3053 IPR018274 PEP-utilising enzyme, active site Thivi_3053 IPR008279 PEP-utilising enzyme, mobile domain Thivi_3055 IPR001173 Glycosyltransferase 2-like Thivi_3055 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3059 IPR003557 Cytochrome c-type biogenesis protein CcmC Thivi_3059 IPR002541 Cytochrome c assembly protein Thivi_3062 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Thivi_3062 IPR003544 Cytochrome c-type biogenesis protein CcmB Thivi_3063 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3063 IPR005895 ABC transporter, haem export, CcmA Thivi_3063 IPR017871 ABC transporter, conserved site Thivi_3063 IPR003439 ABC transporter-like Thivi_3063 IPR003593 AAA+ ATPase domain Thivi_3064 IPR013026 Tetratricopeptide repeat-containing domain Thivi_3064 IPR017560 Cytochrome c-type biogenesis protein CcmI Thivi_3064 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_3064 IPR019734 Tetratricopeptide repeat Thivi_3065 IPR013026 Tetratricopeptide repeat-containing domain Thivi_3065 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Thivi_3065 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_3065 IPR019734 Tetratricopeptide repeat Thivi_3065 IPR005616 CcmH/CycL/Ccl2/NrfF family Thivi_3066 IPR013740 Redoxin Thivi_3066 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE Thivi_3066 IPR013766 Thioredoxin domain Thivi_3066 IPR017937 Thioredoxin, conserved site Thivi_3066 IPR036249 Thioredoxin-like superfamily Thivi_3067 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Thivi_3067 IPR002541 Cytochrome c assembly protein Thivi_3067 IPR003567 Cytochrome c-type biogenesis protein Thivi_3067 IPR003568 Cytochrome c-type biogenesis protein CcmF Thivi_3068 IPR004329 CcmE/CycJ protein Thivi_3068 IPR036127 CcmE-like superfamily Thivi_3069 IPR003738 SOS response associated peptidase (SRAP) Thivi_3069 IPR036590 SOS response associated peptidase-like Thivi_3070 IPR036873 Rhodanese-like domain superfamily Thivi_3070 IPR001763 Rhodanese-like domain Thivi_3071 IPR006070 YrdC-like domain Thivi_3071 IPR041440 HypF, Kae1-like domain Thivi_3071 IPR011125 Zinc finger, HypF-type Thivi_3071 IPR001792 Acylphosphatase-like domain Thivi_3071 IPR017968 Acylphosphatase, conserved site Thivi_3071 IPR036046 Acylphosphatase-like domain superfamily Thivi_3071 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_3071 IPR004421 Carbamoyltransferase, HypF-type Thivi_3072 IPR002569 Peptide methionine sulphoxide reductase MsrA Thivi_3072 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily Thivi_3075 IPR042099 AMP-dependent synthetase-like superfamily Thivi_3075 IPR000873 AMP-dependent synthetase/ligase Thivi_3075 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain Thivi_3075 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_3075 IPR020845 AMP-binding, conserved site Thivi_3076 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_3076 IPR005814 Aminotransferase class-III Thivi_3076 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_3076 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3076 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Thivi_3077 IPR034291 Thiamine phosphate synthase Thivi_3077 IPR022998 Thiamine phosphate synthase/TenI Thivi_3077 IPR036206 Thiamin phosphate synthase superfamily Thivi_3077 IPR013785 Aldolase-type TIM barrel Thivi_3078 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Thivi_3078 IPR029056 Ribokinase-like Thivi_3078 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Thivi_3079 IPR018527 Rubredoxin, iron-binding site Thivi_3079 IPR024935 Rubredoxin domain Thivi_3079 IPR024934 Rubredoxin-like domain Thivi_3079 IPR024922 Rubredoxin Thivi_3081 IPR016092 FeS cluster insertion protein Thivi_3081 IPR035903 HesB-like domain superfamily Thivi_3081 IPR023063 FeS cluster insertion protein ErpA Thivi_3081 IPR000361 FeS cluster biogenesis Thivi_3081 IPR017870 FeS cluster insertion, C-terminal, conserved site Thivi_3082 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Thivi_3082 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Thivi_3082 IPR036291 NAD(P)-binding domain superfamily Thivi_3082 IPR000534 Semialdehyde dehydrogenase, NAD-binding Thivi_3082 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 Thivi_3083 IPR016092 FeS cluster insertion protein Thivi_3083 IPR000361 FeS cluster biogenesis Thivi_3083 IPR023063 FeS cluster insertion protein ErpA Thivi_3083 IPR035903 HesB-like domain superfamily Thivi_3083 IPR017870 FeS cluster insertion, C-terminal, conserved site Thivi_3085 IPR002942 RNA-binding S4 domain Thivi_3085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3085 IPR002307 Tyrosine-tRNA ligase Thivi_3085 IPR024088 Tyrosine-tRNA ligase, bacterial-type Thivi_3085 IPR002305 Aminoacyl-tRNA synthetase, class Ic Thivi_3085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3085 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 Thivi_3085 IPR036986 RNA-binding S4 domain superfamily Thivi_3087 IPR036291 NAD(P)-binding domain superfamily Thivi_3087 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Thivi_3087 IPR006114 6-phosphogluconate dehydrogenase, C-terminal Thivi_3087 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating Thivi_3087 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thivi_3087 IPR006184 6-phosphogluconate-binding site Thivi_3087 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_3087 IPR006183 6-phosphogluconate dehydrogenase Thivi_3088 IPR011342 Shikimate dehydrogenase Thivi_3088 IPR022893 Shikimate dehydrogenase family Thivi_3088 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Thivi_3088 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thivi_3088 IPR036291 NAD(P)-binding domain superfamily Thivi_3088 IPR041121 SDH, C-terminal Thivi_3089 IPR030656 Delta-aminolevulinic acid dehydratase, active site Thivi_3089 IPR013785 Aldolase-type TIM barrel Thivi_3089 IPR001731 Delta-aminolevulinic acid dehydratase Thivi_3090 IPR019999 Anthranilate synthase component I-like Thivi_3090 IPR006805 Anthranilate synthase component I, N-terminal Thivi_3090 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_3090 IPR005801 ADC synthase Thivi_3090 IPR005802 Aminodeoxychorismate synthase, component I Thivi_3092 IPR001623 DnaJ domain Thivi_3092 IPR023859 DNA-binding protein, curved-DNA Thivi_3092 IPR002939 Chaperone DnaJ, C-terminal Thivi_3092 IPR018253 DnaJ domain, conserved site Thivi_3092 IPR008971 HSP40/DnaJ peptide-binding Thivi_3092 IPR036869 Chaperone J-domain superfamily Thivi_3093 IPR022835 Chaperone modulatory protein CbpM Thivi_3094 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Thivi_3094 IPR004393 Nicotinate-nucleotide pyrophosphorylase Thivi_3094 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Thivi_3094 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily Thivi_3094 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal Thivi_3094 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Thivi_3094 IPR013785 Aldolase-type TIM barrel Thivi_3095 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Thivi_3095 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily Thivi_3097 IPR001036 Acriflavin resistance protein Thivi_3097 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3097 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thivi_3099 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3099 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site Thivi_3099 IPR002941 DNA methylase N-4/N-6 Thivi_3099 IPR001091 Restriction/modification DNA-methylase Thivi_3109 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3109 IPR029012 Helix hairpin bin domain superfamily Thivi_3109 IPR003959 ATPase, AAA-type, core Thivi_3109 IPR013134 RAD50, zinc hook Thivi_3111 IPR004017 Cysteine-rich domain Thivi_3114 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3114 IPR002937 Amine oxidase Thivi_3114 IPR014105 Carotenoid/retinoid oxidoreductase Thivi_3115 IPR016059 DNA ligase, ATP-dependent, conserved site Thivi_3115 IPR029319 DNA ligase, OB-like domain Thivi_3115 IPR012340 Nucleic acid-binding, OB-fold Thivi_3115 IPR012310 DNA ligase, ATP-dependent, central Thivi_3116 IPR025835 Thiopurine S-methyltransferase Thivi_3116 IPR008854 TPMT family Thivi_3116 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification Thivi_3116 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3117 IPR000788 Ribonucleotide reductase large subunit, C-terminal Thivi_3117 IPR039718 Ribonucleoside-diphosphate reductase large subunit Thivi_3117 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Thivi_3117 IPR013346 Ribonucleotide reductase, class I , alpha subunit Thivi_3117 IPR005144 ATP-cone domain Thivi_3117 IPR013509 Ribonucleotide reductase large subunit, N-terminal Thivi_3120 IPR008854 TPMT family Thivi_3120 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification Thivi_3120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3120 IPR025835 Thiopurine S-methyltransferase Thivi_3121 IPR003775 Flagellar assembly factor FliW Thivi_3121 IPR024046 Flagellar assembly factor FliW domain superfamily Thivi_3122 IPR005474 Transketolase, N-terminal Thivi_3122 IPR029061 Thiamin diphosphate-binding fold Thivi_3123 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3123 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_3123 IPR029061 Thiamin diphosphate-binding fold Thivi_3123 IPR033248 Transketolase, C-terminal domain Thivi_3125 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thivi_3125 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily Thivi_3125 IPR036422 RuBisCO large subunit, N-terminal domain superfamily Thivi_3125 IPR033966 RuBisCO Thivi_3126 IPR003849 Preprotein translocase YajC Thivi_3127 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Thivi_3127 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3127 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thivi_3127 IPR027398 SecD export protein N-terminal TM domain Thivi_3127 IPR001036 Acriflavin resistance protein Thivi_3127 IPR005791 Protein translocase subunit SecD Thivi_3128 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Thivi_3128 IPR005665 Protein-export membrane protein SecF, bacterial Thivi_3128 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thivi_3131 IPR013830 SGNH hydrolase-type esterase domain Thivi_3131 IPR036514 SGNH hydrolase superfamily Thivi_3132 IPR003439 ABC transporter-like Thivi_3132 IPR017871 ABC transporter, conserved site Thivi_3132 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3132 IPR003593 AAA+ ATPase domain Thivi_3133 IPR038766 Membrane component of ABC transporter, predicted Thivi_3136 IPR025154 Putative metallopeptidase domain Thivi_3136 IPR018698 VWA-like domain Thivi_3137 IPR001915 Peptidase M48 Thivi_3137 IPR030873 Beta-barrel assembly-enhancing protease Thivi_3137 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_3142 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3142 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3142 IPR000944 Transcription regulator Rrf2-type Thivi_3142 IPR030489 Transcription regulator Rrf2-type, conserved site Thivi_3142 IPR010242 Transcription factor HTH, IscR Thivi_3143 IPR018357 Hexapeptide transferase, conserved site Thivi_3143 IPR011004 Trimeric LpxA-like superfamily Thivi_3143 IPR042122 Serine acetyltransferase, N-terminal domain superfamily Thivi_3143 IPR005881 Serine O-acetyltransferase Thivi_3143 IPR001451 Hexapeptide repeat Thivi_3144 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Thivi_3144 IPR002941 DNA methylase N-4/N-6 Thivi_3144 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_3144 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3148 IPR004384 RNA methyltransferase TrmJ/LasT Thivi_3148 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_3148 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thivi_3148 IPR029028 Alpha/beta knot methyltransferases Thivi_3149 IPR020583 Inositol monophosphatase, metal-binding site Thivi_3149 IPR033942 Inositol monophosphatase Thivi_3149 IPR000760 Inositol monophosphatase-like Thivi_3149 IPR020550 Inositol monophosphatase, conserved site Thivi_3149 IPR022337 Inositol monophosphatase, SuhB Thivi_3150 IPR001029 Flagellin, D0/D1 domain Thivi_3150 IPR042187 Flagellin, C-terminal domain, subdomain 2 Thivi_3150 IPR001492 Flagellin Thivi_3154 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3154 IPR025931 TaqI-like C-terminal specificity domain Thivi_3154 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_3154 IPR011639 Restriction modification methylase Eco57I Thivi_3155 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thivi_3155 IPR029061 Thiamin diphosphate-binding fold Thivi_3155 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_3155 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase Thivi_3155 IPR032264 Menaquinone biosynthesis protein MenD, middle domain Thivi_3155 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thivi_3156 IPR034681 Isochorismate synthase MenF Thivi_3156 IPR005801 ADC synthase Thivi_3156 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_3156 IPR004561 Isochorismate synthase Thivi_3158 IPR021295 Protein of unknown function DUF2867 Thivi_3158 IPR016040 NAD(P)-binding domain Thivi_3158 IPR036291 NAD(P)-binding domain superfamily Thivi_3160 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_3160 IPR000727 Target SNARE coiled-coil homology domain Thivi_3160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_3160 IPR004090 Chemotaxis methyl-accepting receptor Thivi_3160 IPR003660 HAMP domain Thivi_3161 IPR017853 Glycoside hydrolase superfamily Thivi_3161 IPR001764 Glycoside hydrolase, family 3, N-terminal Thivi_3161 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily Thivi_3161 IPR022956 Beta-hexosaminidase, bacterial Thivi_3164 IPR035994 Nucleoside phosphorylase superfamily Thivi_3164 IPR000845 Nucleoside phosphorylase domain Thivi_3164 IPR018099 Purine phosphorylase, family 2, conserved site Thivi_3164 IPR010044 Methylthioadenosine phosphorylase (MTAP) Thivi_3166 IPR035956 RimP, N-terminal domain superfamily Thivi_3166 IPR003728 Ribosome maturation factor RimP Thivi_3166 IPR028998 Ribosome maturation factor RimP, C-terminal Thivi_3166 IPR028989 Ribosome maturation factor RimP, N-terminal Thivi_3166 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Thivi_3167 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical Thivi_3167 IPR013735 Transcription factor NusA, N-terminal Thivi_3167 IPR010214 Transcription termination factor NusA, C-terminal duplication Thivi_3167 IPR009019 K homology domain superfamily, prokaryotic type Thivi_3167 IPR030842 Transcription termination/antitermination protein NusA, bacterial Thivi_3167 IPR022967 RNA-binding domain, S1 Thivi_3167 IPR025249 KH domain, NusA-like Thivi_3167 IPR015946 K homology domain-like, alpha/beta Thivi_3167 IPR036555 NusA, N-terminal domain superfamily Thivi_3167 IPR012340 Nucleic acid-binding, OB-fold Thivi_3167 IPR003029 S1 domain Thivi_3167 IPR010213 Transcription termination factor NusA Thivi_3168 IPR023115 Translation initiation factor IF- 2, domain 3 Thivi_3168 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_3168 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Thivi_3168 IPR015760 Translation initiation factor IF- 2 Thivi_3168 IPR005225 Small GTP-binding protein domain Thivi_3168 IPR006847 Translation initiation factor IF-2, N-terminal Thivi_3168 IPR000178 Translation initiation factor aIF-2, bacterial-like Thivi_3168 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3168 IPR009061 Putative DNA-binding domain superfamily Thivi_3168 IPR000795 Transcription factor, GTP-binding domain Thivi_3168 IPR013575 Initiation factor 2 associated domain, bacterial Thivi_3168 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_3169 IPR020053 Ribosome-binding factor A, conserved site Thivi_3169 IPR023799 Ribosome-binding factor A domain superfamily Thivi_3169 IPR000238 Ribosome-binding factor A Thivi_3169 IPR015946 K homology domain-like, alpha/beta Thivi_3170 IPR002501 Pseudouridine synthase II, N-terminal Thivi_3170 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_3170 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal Thivi_3170 IPR036974 PUA domain superfamily Thivi_3170 IPR014780 tRNA pseudouridine synthase II, TruB Thivi_3170 IPR032819 tRNA pseudouridylate synthase B, C-terminal Thivi_3170 IPR015947 PUA-like superfamily Thivi_3171 IPR005290 Ribosomal protein S15, bacterial-type Thivi_3171 IPR000589 Ribosomal protein S15 Thivi_3171 IPR009068 S15/NS1, RNA-binding Thivi_3172 IPR036612 K Homology domain, type 1 superfamily Thivi_3172 IPR003029 S1 domain Thivi_3172 IPR001247 Exoribonuclease, phosphorolytic domain 1 Thivi_3172 IPR004088 K Homology domain, type 1 Thivi_3172 IPR004087 K Homology domain Thivi_3172 IPR036345 Exoribonuclease, PH domain 2 superfamily Thivi_3172 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3172 IPR022967 RNA-binding domain, S1 Thivi_3172 IPR027408 PNPase/RNase PH domain superfamily Thivi_3172 IPR012162 Polyribonucleotide nucleotidyltransferase Thivi_3172 IPR012340 Nucleic acid-binding, OB-fold Thivi_3172 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Thivi_3172 IPR015847 Exoribonuclease, phosphorolytic domain 2 Thivi_3173 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_3173 IPR035906 MetI-like superfamily Thivi_3174 IPR035906 MetI-like superfamily Thivi_3174 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_3175 IPR003593 AAA+ ATPase domain Thivi_3175 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_3175 IPR003439 ABC transporter-like Thivi_3175 IPR017871 ABC transporter, conserved site Thivi_3175 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3175 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Thivi_3175 IPR013611 Transport-associated OB, type 2 Thivi_3176 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Thivi_3176 IPR006059 Bacterial extracellular solute-binding protein Thivi_3177 IPR004651 Histidine biosynthesis, HisF Thivi_3177 IPR011060 Ribulose-phosphate binding barrel Thivi_3177 IPR006062 Histidine biosynthesis Thivi_3177 IPR013785 Aldolase-type TIM barrel Thivi_3179 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3179 IPR007202 4Fe-4S domain Thivi_3179 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Thivi_3179 IPR011005 Dihydropteroate synthase-like Thivi_3179 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3181 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3181 IPR009051 Alpha-helical ferredoxin Thivi_3181 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3181 IPR019554 Soluble ligand binding domain Thivi_3181 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Thivi_3181 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_3181 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_3181 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_3182 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Thivi_3182 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Thivi_3183 IPR007329 FMN-binding Thivi_3183 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Thivi_3184 IPR010968 Ion-translocating oxidoreductase complex subunit E Thivi_3184 IPR003667 NqrDE/RnfAE Thivi_3185 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Thivi_3185 IPR003667 NqrDE/RnfAE Thivi_3187 IPR008213 CpcD-like domain Thivi_3187 IPR015701 Ferredoxin--NADP reductase Thivi_3187 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3187 IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type Thivi_3187 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Thivi_3187 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thivi_3187 IPR017938 Riboflavin synthase-like beta-barrel Thivi_3187 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Thivi_3187 IPR017927 FAD-binding domain, ferredoxin reductase-type Thivi_3188 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3188 IPR032781 ABC-transporter extension domain Thivi_3188 IPR003439 ABC transporter-like Thivi_3188 IPR017871 ABC transporter, conserved site Thivi_3188 IPR003593 AAA+ ATPase domain Thivi_3188 IPR022374 Energy-dependent translational throttle protein EttA Thivi_3191 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3191 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain Thivi_3192 IPR036291 NAD(P)-binding domain superfamily Thivi_3192 IPR003148 Regulator of K+ conductance, N-terminal Thivi_3192 IPR006037 Regulator of K+ conductance, C-terminal Thivi_3192 IPR006036 Potassium uptake protein TrkA Thivi_3192 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_3193 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_3193 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3193 IPR001789 Signal transduction response regulator, receiver domain Thivi_3193 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3193 IPR002197 DNA binding HTH domain, Fis-type Thivi_3193 IPR009057 Homeobox-like domain superfamily Thivi_3193 IPR011006 CheY-like superfamily Thivi_3193 IPR003593 AAA+ ATPase domain Thivi_3193 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3194 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3194 IPR035965 PAS domain superfamily Thivi_3194 IPR000014 PAS domain Thivi_3194 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Thivi_3194 IPR003660 HAMP domain Thivi_3194 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3194 IPR013767 PAS fold Thivi_3194 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3194 IPR005467 Histidine kinase domain Thivi_3194 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3194 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3196 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site Thivi_3196 IPR006027 NusB/RsmB/TIM44 Thivi_3196 IPR035926 NusB-like superfamily Thivi_3196 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3196 IPR004573 rRNA small subunit methyltransferase B Thivi_3196 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type Thivi_3196 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_3197 IPR037022 Formyl transferase, C-terminal domain superfamily Thivi_3197 IPR005793 Formyl transferase, C-terminal Thivi_3197 IPR005794 Methionyl-tRNA formyltransferase Thivi_3197 IPR036477 Formyl transferase, N-terminal domain superfamily Thivi_3197 IPR011034 Formyl transferase-like, C-terminal domain superfamily Thivi_3197 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Thivi_3197 IPR002376 Formyl transferase, N-terminal Thivi_3197 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain Thivi_3198 IPR023635 Peptide deformylase Thivi_3198 IPR036821 Peptide deformylase superfamily Thivi_3200 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3200 IPR003488 DNA recombination-mediator protein A Thivi_3200 IPR041614 DprA, winged helix domain Thivi_3201 IPR007456 Smg Thivi_3202 IPR005733 DNA topoisomerase I, bacterial-type Thivi_3202 IPR028612 DNA topoisomerase I, type IA Thivi_3202 IPR025589 Topoisomerase C-terminal repeat Thivi_3202 IPR006171 TOPRIM domain Thivi_3202 IPR034149 DNA topoisomerase 1, TOPRIM domain Thivi_3202 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Thivi_3202 IPR023405 DNA topoisomerase, type IA, core domain Thivi_3202 IPR013497 DNA topoisomerase, type IA, central Thivi_3202 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Thivi_3202 IPR000380 DNA topoisomerase, type IA Thivi_3202 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Thivi_3202 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Thivi_3202 IPR003601 DNA topoisomerase, type IA, domain 2 Thivi_3202 IPR023406 DNA topoisomerase, type IA, active site Thivi_3204 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_3204 IPR023535 Threonylcarbamoyl-AMP synthase Thivi_3204 IPR006070 YrdC-like domain Thivi_3205 IPR003333 Mycolic acid cyclopropane synthase Thivi_3205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3209 IPR004680 Citrate transporter-like domain Thivi_3210 IPR005860 L-threonine-O-3-phosphate decarboxylase Thivi_3210 IPR004839 Aminotransferase, class I/classII Thivi_3210 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thivi_3210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_3210 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_3213 IPR003593 AAA+ ATPase domain Thivi_3213 IPR041569 AAA ATPase, AAA+ lid domain Thivi_3213 IPR003959 ATPase, AAA-type, core Thivi_3213 IPR003960 ATPase, AAA-type, conserved site Thivi_3213 IPR005936 Peptidase, FtsH Thivi_3213 IPR000642 Peptidase M41 Thivi_3213 IPR037219 Peptidase M41-like Thivi_3213 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3214 IPR031312 Sodium/sulphate symporter, conserved site Thivi_3214 IPR004680 Citrate transporter-like domain Thivi_3214 IPR006037 Regulator of K+ conductance, C-terminal Thivi_3214 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily Thivi_3219 IPR011761 ATP-grasp fold Thivi_3219 IPR041107 RimK, PreATP-grasp domain Thivi_3219 IPR013815 ATP-grasp fold, subdomain 1 Thivi_3219 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK Thivi_3219 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Thivi_3219 IPR013651 ATP-grasp fold, RimK-type Thivi_3220 IPR001872 Peptidase A8, signal peptidase II Thivi_3223 IPR023585 Isoleucine-tRNA ligase, type 1 Thivi_3223 IPR002301 Isoleucine-tRNA ligase Thivi_3223 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_3223 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3223 IPR010663 Zinc finger, FPG/IleRS-type Thivi_3223 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain Thivi_3223 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thivi_3223 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thivi_3223 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thivi_3223 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3225 IPR004839 Aminotransferase, class I/classII Thivi_3225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_3225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_3225 IPR005861 Histidinol-phosphate aminotransferase family Thivi_3225 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3226 IPR016161 Aldehyde/histidinol dehydrogenase Thivi_3226 IPR001692 Histidinol dehydrogenase, conserved site Thivi_3226 IPR022695 Histidinol dehydrogenase, monofunctional Thivi_3226 IPR012131 Histidinol dehydrogenase Thivi_3228 IPR013820 ATP phosphoribosyltransferase, catalytic domain Thivi_3228 IPR024893 ATP phosphoribosyltransferase HisG, short form Thivi_3228 IPR018198 ATP phosphoribosyltransferase, conserved site Thivi_3228 IPR001348 ATP phosphoribosyltransferase HisG Thivi_3229 IPR001986 Enolpyruvate transferase domain Thivi_3229 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Thivi_3229 IPR036968 Enolpyruvate transferase domain superfamily Thivi_3229 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Thivi_3232 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD Thivi_3232 IPR003399 Mce/MlaD Thivi_3233 IPR030802 ABC transporter permease MalE Thivi_3233 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Thivi_3234 IPR017871 ABC transporter, conserved site Thivi_3234 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3234 IPR003593 AAA+ ATPase domain Thivi_3234 IPR003439 ABC transporter-like Thivi_3234 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl Thivi_3235 IPR011009 Protein kinase-like domain superfamily Thivi_3235 IPR004147 UbiB domain Thivi_3239 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3239 IPR000524 Transcription regulator HTH, GntR Thivi_3239 IPR000485 AsnC-type HTH domain Thivi_3239 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3239 IPR011711 GntR, C-terminal Thivi_3239 IPR008920 Transcription regulator FadR/GntR, C-terminal Thivi_3240 IPR012695 2-methylisocitrate lyase Thivi_3240 IPR039556 ICL/PEPM domain Thivi_3240 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Thivi_3240 IPR040442 Pyruvate kinase-like domain superfamily Thivi_3240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_3241 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_3241 IPR016142 Citrate synthase-like, large alpha subdomain Thivi_3241 IPR036969 Citrate synthase superfamily Thivi_3241 IPR019810 Citrate synthase active site Thivi_3241 IPR002020 Citrate synthase Thivi_3241 IPR011278 2-methylcitrate synthase/citrate synthase type I Thivi_3241 IPR024176 Citrate synthase, bacterial-type Thivi_3242 IPR042188 MmgE/PrpD superfamily, domain 2 Thivi_3242 IPR036148 MmgE/PrpD superfamily Thivi_3242 IPR005656 MmgE/PrpD Thivi_3242 IPR042183 MmgE/PrpD superfamily, domain 1 Thivi_3242 IPR012705 2-methylcitrate dehydratase PrpD Thivi_3250 IPR029787 Nucleotide cyclase Thivi_3250 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region Thivi_3250 IPR000160 GGDEF domain Thivi_3251 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3251 IPR005467 Histidine kinase domain Thivi_3251 IPR016132 Phytochrome chromophore attachment domain Thivi_3251 IPR003018 GAF domain Thivi_3251 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3251 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3251 IPR035965 PAS domain superfamily Thivi_3251 IPR013654 PAS fold-2 Thivi_3251 IPR013515 Phytochrome, central region Thivi_3251 IPR029016 GAF-like domain superfamily Thivi_3251 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3251 IPR001294 Phytochrome Thivi_3253 IPR003439 ABC transporter-like Thivi_3253 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal Thivi_3253 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3253 IPR003593 AAA+ ATPase domain Thivi_3253 IPR018449 NIL domain Thivi_3253 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain Thivi_3253 IPR017871 ABC transporter, conserved site Thivi_3257 IPR005128 Alpha-acetolactate decarboxylase Thivi_3262 IPR003439 ABC transporter-like Thivi_3262 IPR017871 ABC transporter, conserved site Thivi_3262 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3262 IPR003593 AAA+ ATPase domain Thivi_3263 IPR037294 ABC transporter, BtuC-like Thivi_3263 IPR001626 ABC transporter, TroCD-like Thivi_3264 IPR002481 Ferric-uptake regulator Thivi_3264 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3264 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3267 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_3267 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3267 IPR036291 NAD(P)-binding domain superfamily Thivi_3268 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 IPR036291 NAD(P)-binding domain superfamily Thivi_3270 IPR034704 L28p-like Thivi_3270 IPR026569 Ribosomal protein L28/L24 Thivi_3270 IPR037147 Ribosomal protein L28/L24 superfamily Thivi_3270 IPR001383 Ribosomal protein L28 Thivi_3271 IPR001705 Ribosomal protein L33 Thivi_3271 IPR011332 Zinc-binding ribosomal protein Thivi_3271 IPR018264 Ribosomal protein L33, conserved site Thivi_3271 IPR038584 Ribosomal protein L33 superfamily Thivi_3276 IPR013534 Starch synthase, catalytic domain Thivi_3276 IPR011835 Bacterial/plant glycogen synthase Thivi_3276 IPR001296 Glycosyl transferase, family 1 Thivi_3277 IPR018181 Heat shock protein 70, conserved site Thivi_3277 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Thivi_3277 IPR012725 Chaperone DnaK Thivi_3277 IPR013126 Heat shock protein 70 family Thivi_3281 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3281 IPR017804 Methyltransferase EgtD-like Thivi_3281 IPR019257 Histidine-specific methyltransferase, SAM-dependent Thivi_3281 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type Thivi_3281 IPR035094 Histidine N-alpha-methyltransferase Thivi_3282 IPR042095 Sulfatase-modifying factor enzyme superfamily Thivi_3282 IPR005532 Sulfatase-modifying factor enzyme Thivi_3282 IPR032890 Hercynine oxygenase, Actinobacteria Thivi_3282 IPR017806 Ergothioneine biosynthesis protein EgtB Thivi_3282 IPR024775 DinB-like domain Thivi_3282 IPR016187 C-type lectin fold Thivi_3282 IPR034660 DinB/YfiT-like putative metalloenzymes Thivi_3285 IPR016092 FeS cluster insertion protein Thivi_3285 IPR017870 FeS cluster insertion, C-terminal, conserved site Thivi_3285 IPR035903 HesB-like domain superfamily Thivi_3285 IPR000361 FeS cluster biogenesis Thivi_3286 IPR003808 Fe-S metabolism associated domain, SufE-like Thivi_3288 IPR023346 Lysozyme-like domain superfamily Thivi_3288 IPR001264 Glycosyl transferase, family 51 Thivi_3288 IPR011812 Biosynthetic peptidoglycan transglycosylase Thivi_3288 IPR036950 Penicillin binding protein transglycosylase domain Thivi_3289 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3289 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3289 IPR005467 Histidine kinase domain Thivi_3289 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3289 IPR000014 PAS domain Thivi_3289 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3289 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3292 IPR000374 Phosphatidate cytidylyltransferase Thivi_3299 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3299 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Thivi_3299 IPR011803 Adenylylsulphate reductase, alpha subunit Thivi_3299 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Thivi_3299 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Thivi_3300 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3300 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily Thivi_3300 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Thivi_3300 IPR011802 Adenylylsulphate reductase, beta subunit Thivi_3300 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3301 IPR006696 Protein of unknown function DUF423 Thivi_3302 IPR029028 Alpha/beta knot methyltransferases Thivi_3302 IPR015947 PUA-like superfamily Thivi_3302 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_3302 IPR006700 Ribosomal RNA small subunit methyltransferase E Thivi_3303 IPR036061 CheW-like domain superfamily Thivi_3303 IPR002545 CheW-like domain Thivi_3303 IPR001789 Signal transduction response regulator, receiver domain Thivi_3303 IPR005467 Histidine kinase domain Thivi_3303 IPR036641 HPT domain superfamily Thivi_3303 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3303 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3303 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_3303 IPR011006 CheY-like superfamily Thivi_3303 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3304 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_3304 IPR029095 NarX-like, N-terminal Thivi_3304 IPR004090 Chemotaxis methyl-accepting receptor Thivi_3304 IPR003660 HAMP domain Thivi_3306 IPR001789 Signal transduction response regulator, receiver domain Thivi_3306 IPR011006 CheY-like superfamily Thivi_3307 IPR011006 CheY-like superfamily Thivi_3307 IPR001789 Signal transduction response regulator, receiver domain Thivi_3308 IPR004218 Prokaryotic glutathione synthetase, ATP-binding Thivi_3308 IPR006284 Glutathione synthetase, prokaryotic Thivi_3308 IPR004215 Prokaryotic glutathione synthetase, N-terminal Thivi_3308 IPR016185 Pre-ATP-grasp domain superfamily Thivi_3308 IPR011761 ATP-grasp fold Thivi_3308 IPR013815 ATP-grasp fold, subdomain 1 Thivi_3311 IPR003774 Protein of unknown function UPF0301 Thivi_3312 IPR037027 YqgF/RNase H-like domain superfamily Thivi_3312 IPR006641 YqgF/RNase H-like domain Thivi_3312 IPR005227 Putative pre-16S rRNA nuclease Thivi_3312 IPR012337 Ribonuclease H-like superfamily Thivi_3313 IPR029057 Phosphoribosyltransferase-like Thivi_3313 IPR023050 Bifunctional protein PyrR Thivi_3313 IPR000836 Phosphoribosyltransferase domain Thivi_3314 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Thivi_3314 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily Thivi_3314 IPR002082 Aspartate carbamoyltransferase Thivi_3314 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Thivi_3314 IPR006130 Aspartate/ornithine carbamoyltransferase Thivi_3315 IPR006680 Amidohydrolase-related Thivi_3315 IPR004722 Dihydroorotase Thivi_3315 IPR011059 Metal-dependent hydrolase, composite domain superfamily Thivi_3315 IPR032466 Metal-dependent hydrolase Thivi_3316 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3316 IPR006321 Pilus retraction protein PilT Thivi_3316 IPR001482 Type II/IV secretion system protein Thivi_3316 IPR003593 AAA+ ATPase domain Thivi_3317 IPR001482 Type II/IV secretion system protein Thivi_3317 IPR003593 AAA+ ATPase domain Thivi_3317 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3317 IPR006321 Pilus retraction protein PilT Thivi_3319 IPR000031 PurE domain Thivi_3319 IPR033747 Class I PurE Thivi_3319 IPR024694 PurE, prokaryotic type Thivi_3319 IPR035893 PurE domain superfamily Thivi_3320 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit Thivi_3320 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Thivi_3320 IPR016185 Pre-ATP-grasp domain superfamily Thivi_3320 IPR013815 ATP-grasp fold, subdomain 1 Thivi_3320 IPR011054 Rudiment single hybrid motif Thivi_3320 IPR011761 ATP-grasp fold Thivi_3320 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain Thivi_3322 IPR012676 TGS-like Thivi_3322 IPR004095 TGS Thivi_3322 IPR007685 RelA/SpoT Thivi_3322 IPR004811 RelA/SpoT family Thivi_3322 IPR003607 HD/PDEase domain Thivi_3322 IPR012675 Beta-grasp domain superfamily Thivi_3322 IPR002912 ACT domain Thivi_3322 IPR033655 RelA, TGS domain Thivi_3323 IPR006110 RNA polymerase, subunit omega/K/RPB6 Thivi_3323 IPR003716 DNA-directed RNA polymerase, omega subunit Thivi_3323 IPR012293 RNA polymerase subunit, RPB6/omega Thivi_3323 IPR036161 RPB6/omega subunit-like superfamily Thivi_3324 IPR008144 Guanylate kinase-like domain Thivi_3324 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3324 IPR020590 Guanylate kinase, conserved site Thivi_3324 IPR017665 Guanylate kinase Thivi_3324 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Thivi_3325 IPR013527 YicC-like, N-terminal Thivi_3325 IPR013551 Domain of unknown function DUF1732 Thivi_3325 IPR005229 Conserved hypothetical protein CHP00255 Thivi_3326 IPR008271 Serine/threonine-protein kinase, active site Thivi_3326 IPR017441 Protein kinase, ATP binding site Thivi_3326 IPR011009 Protein kinase-like domain superfamily Thivi_3326 IPR000719 Protein kinase domain Thivi_3326 IPR032710 NTF2-like domain superfamily Thivi_3327 IPR001247 Exoribonuclease, phosphorolytic domain 1 Thivi_3327 IPR015847 Exoribonuclease, phosphorolytic domain 2 Thivi_3327 IPR036345 Exoribonuclease, PH domain 2 superfamily Thivi_3327 IPR027408 PNPase/RNase PH domain superfamily Thivi_3327 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3327 IPR002381 Ribonuclease PH, bacterial-type Thivi_3327 IPR018336 Ribonuclease PH, conserved site Thivi_3328 IPR002637 Ham1-like protein Thivi_3328 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_3328 IPR020922 dITP/XTP pyrophosphatase Thivi_3329 IPR029066 PLP-binding barrel Thivi_3329 IPR011078 Pyridoxal phosphate homeostasis protein Thivi_3329 IPR001608 Alanine racemase, N-terminal Thivi_3330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_3330 IPR000304 Pyrroline-5-carboxylate reductase Thivi_3330 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Thivi_3330 IPR036291 NAD(P)-binding domain superfamily Thivi_3330 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Thivi_3331 IPR003425 CCB3/YggT Thivi_3332 IPR036591 YggU-like superfamily Thivi_3332 IPR003746 Protein of unknown function DUF167 Thivi_3332 IPR005228 Conserved hypothetical protein CHP00251 Thivi_3334 IPR004467 Orotate phosphoribosyl transferase domain Thivi_3334 IPR023031 Orotate phosphoribosyltransferase Thivi_3334 IPR000836 Phosphoribosyltransferase domain Thivi_3334 IPR029057 Phosphoribosyltransferase-like Thivi_3336 IPR007833 Capsule polysaccharide biosynthesis Thivi_3342 IPR023512 Deaminase MtaD/DadD Thivi_3342 IPR006680 Amidohydrolase-related Thivi_3342 IPR032466 Metal-dependent hydrolase Thivi_3342 IPR011059 Metal-dependent hydrolase, composite domain superfamily Thivi_3343 IPR005251 Methylthioribose-1-phosphate isomerase Thivi_3343 IPR000649 Initiation factor 2B-related Thivi_3343 IPR011559 Initiation factor 2B alpha/beta/delta Thivi_3343 IPR037171 NagB/RpiA transferase-like Thivi_3343 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal Thivi_3345 IPR015864 FAD synthetase Thivi_3345 IPR023468 Riboflavin kinase Thivi_3345 IPR002606 Riboflavin kinase, bacterial Thivi_3345 IPR023465 Riboflavin kinase domain superfamily Thivi_3345 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Thivi_3345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3347 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3347 IPR011813 Penicillin-binding protein 1B Thivi_3347 IPR036950 Penicillin binding protein transglycosylase domain Thivi_3347 IPR001460 Penicillin-binding protein, transpeptidase Thivi_3347 IPR028166 Bifunctional transglycosylase second domain Thivi_3347 IPR001264 Glycosyl transferase, family 51 Thivi_3347 IPR023346 Lysozyme-like domain superfamily Thivi_3349 IPR006935 Helicase/UvrB, N-terminal Thivi_3349 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3349 IPR006555 ATP-dependent helicase, C-terminal Thivi_3349 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type Thivi_3349 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3350 IPR024706 Peroxiredoxin, AhpC-type Thivi_3350 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thivi_3350 IPR036249 Thioredoxin-like superfamily Thivi_3350 IPR019479 Peroxiredoxin, C-terminal Thivi_3350 IPR022915 Peroxiredoxin, TDXH subfamily Thivi_3350 IPR013766 Thioredoxin domain Thivi_3351 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3351 IPR003593 AAA+ ATPase domain Thivi_3351 IPR011709 Domain of unknown function DUF1605 Thivi_3351 IPR007502 Helicase-associated domain Thivi_3351 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3351 IPR010222 RNA helicase HrpA Thivi_3351 IPR024590 RNA helicase HrpA, C-terminal Thivi_3351 IPR001650 Helicase, C-terminal Thivi_3351 IPR011545 DEAD/DEAH box helicase domain Thivi_3352 IPR011006 CheY-like superfamily Thivi_3352 IPR001633 EAL domain Thivi_3352 IPR000160 GGDEF domain Thivi_3352 IPR029787 Nucleotide cyclase Thivi_3352 IPR001789 Signal transduction response regulator, receiver domain Thivi_3352 IPR035919 EAL domain superfamily Thivi_3353 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain Thivi_3353 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3353 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3353 IPR002547 tRNA-binding domain Thivi_3353 IPR012340 Nucleic acid-binding, OB-fold Thivi_3353 IPR029038 Methionyl-tRNA synthetase, Zn-domain Thivi_3353 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Thivi_3353 IPR023458 Methionine-tRNA ligase, type 1 Thivi_3353 IPR014758 Methionyl-tRNA synthetase Thivi_3353 IPR015413 Methionyl/Leucyl tRNA synthetase Thivi_3353 IPR033911 Methioninyl-tRNA synthetase core domain Thivi_3353 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_3357 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Thivi_3357 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site Thivi_3357 IPR005809 Succinate--CoA synthetase, beta subunit Thivi_3357 IPR013815 ATP-grasp fold, subdomain 1 Thivi_3357 IPR011761 ATP-grasp fold Thivi_3357 IPR016102 Succinyl-CoA synthetase-like Thivi_3357 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type Thivi_3358 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Thivi_3358 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Thivi_3358 IPR003781 CoA-binding Thivi_3358 IPR005810 Succinyl-CoA ligase, alpha subunit Thivi_3358 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Thivi_3358 IPR036291 NAD(P)-binding domain superfamily Thivi_3358 IPR016102 Succinyl-CoA synthetase-like Thivi_3360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3360 IPR003694 NAD(+) synthetase Thivi_3360 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_3360 IPR014445 Glutamine-dependent NAD(+) synthetase Thivi_3360 IPR022310 NAD/GMP synthase Thivi_3360 IPR000132 Nitrilase/cyanide hydratase, conserved site Thivi_3360 IPR003010 Carbon-nitrogen hydrolase Thivi_3361 IPR017918 Nitrogen regulatory protein PII, conserved site Thivi_3361 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_3361 IPR002332 Nitrogen regulatory protein P-II, urydylation site Thivi_3361 IPR002187 Nitrogen regulatory protein PII Thivi_3361 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_3362 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_3362 IPR039565 Outer membrane lipoprotein BamD-like Thivi_3362 IPR017689 Outer membrane protein assembly factor BamD Thivi_3363 IPR002942 RNA-binding S4 domain Thivi_3363 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_3363 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Thivi_3363 IPR006225 Pseudouridine synthase, RluC/RluD Thivi_3363 IPR006145 Pseudouridine synthase, RsuA/RluA Thivi_3363 IPR036986 RNA-binding S4 domain superfamily Thivi_3365 IPR002912 ACT domain Thivi_3365 IPR022986 Uncharacterised protein family UPF0237, ACT-type Thivi_3366 IPR023635 Peptide deformylase Thivi_3366 IPR036821 Peptide deformylase superfamily Thivi_3367 IPR040573 Tail specific protease, N-terminal domain Thivi_3367 IPR020992 Tail specific protease, C-terminal Thivi_3367 IPR005151 Tail specific protease Thivi_3367 IPR004447 C-terminal-processing peptidase S41A Thivi_3367 IPR036034 PDZ superfamily Thivi_3367 IPR029045 ClpP/crotonase-like domain superfamily Thivi_3367 IPR001478 PDZ domain Thivi_3368 IPR007370 Glutamate--cysteine ligase Thivi_3368 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thivi_3368 IPR006334 Glutamate--cysteine ligase, monofunctional Thivi_3370 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thivi_3370 IPR022962 Soluble pyridine nucleotide transhydrogenase Thivi_3370 IPR023753 FAD/NAD(P)-binding domain Thivi_3370 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3370 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_3370 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Thivi_3372 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Thivi_3372 IPR005759 Endonuclease III Thivi_3372 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Thivi_3372 IPR000445 Helix-hairpin-helix motif Thivi_3372 IPR004035 Endonuclease III, iron-sulphur binding site Thivi_3372 IPR003265 HhH-GPD domain Thivi_3372 IPR004036 Endonuclease III-like, conserved site-2 Thivi_3372 IPR011257 DNA glycosylase Thivi_3373 IPR000189 Prokaryotic transglycosylase, active site Thivi_3373 IPR008258 Transglycosylase SLT domain 1 Thivi_3373 IPR023346 Lysozyme-like domain superfamily Thivi_3375 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily Thivi_3375 IPR016066 Alpha-D-phosphohexomutase, conserved site Thivi_3375 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thivi_3375 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thivi_3375 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thivi_3375 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thivi_3375 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thivi_3377 IPR006073 GTP binding domain Thivi_3377 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Thivi_3377 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3377 IPR030393 EngB-type guanine nucleotide-binding (G) domain Thivi_3378 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily Thivi_3378 IPR023045 Molybdenum cofactor biosynthesis C Thivi_3378 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain Thivi_3379 IPR008162 Inorganic pyrophosphatase Thivi_3379 IPR036649 Inorganic pyrophosphatase superfamily Thivi_3381 IPR000023 Phosphofructokinase domain Thivi_3381 IPR022953 ATP-dependent 6-phosphofructokinase Thivi_3381 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 Thivi_3381 IPR035966 Phosphofructokinase superfamily Thivi_3383 IPR002938 FAD-binding domain Thivi_3383 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 Thivi_3383 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Thivi_3383 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3384 IPR002938 FAD-binding domain Thivi_3384 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 Thivi_3384 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase Thivi_3384 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Thivi_3384 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3385 IPR000994 Peptidase M24 Thivi_3385 IPR036005 Creatinase/aminopeptidase-like Thivi_3385 IPR007865 Aminopeptidase P, N-terminal Thivi_3385 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Thivi_3385 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Thivi_3385 IPR001714 Peptidase M24, methionine aminopeptidase Thivi_3386 IPR011978 Uncharacterised protein family UPF0149 Thivi_3386 IPR036255 YgfB-like superfamily Thivi_3388 IPR036192 Cell division protein ZapA-like superfamily Thivi_3388 IPR007838 Cell division protein ZapA-like Thivi_3390 IPR002698 5-formyltetrahydrofolate cyclo-ligase Thivi_3390 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Thivi_3390 IPR037171 NagB/RpiA transferase-like Thivi_3391 IPR001633 EAL domain Thivi_3391 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Thivi_3391 IPR013976 Metal-dependent hydrolase HDOD Thivi_3391 IPR035919 EAL domain superfamily Thivi_3392 IPR010113 Nif-specific regulatory protein Thivi_3392 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3392 IPR003593 AAA+ ATPase domain Thivi_3392 IPR003018 GAF domain Thivi_3392 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_3392 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3392 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_3392 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3392 IPR029016 GAF-like domain superfamily Thivi_3392 IPR002197 DNA binding HTH domain, Fis-type Thivi_3392 IPR009057 Homeobox-like domain superfamily Thivi_3393 IPR000700 PAS-associated, C-terminal Thivi_3393 IPR014285 Nitrogen fixation negative regulator NifL Thivi_3393 IPR000014 PAS domain Thivi_3393 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3393 IPR001610 PAC motif Thivi_3393 IPR013767 PAS fold Thivi_3393 IPR005467 Histidine kinase domain Thivi_3393 IPR035965 PAS domain superfamily Thivi_3393 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3393 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3394 IPR003667 NqrDE/RnfAE Thivi_3394 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA Thivi_3395 IPR011005 Dihydropteroate synthase-like Thivi_3395 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria Thivi_3395 IPR007202 4Fe-4S domain Thivi_3395 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB Thivi_3395 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3395 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3396 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3396 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_3396 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_3396 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_3396 IPR009051 Alpha-helical ferredoxin Thivi_3396 IPR019554 Soluble ligand binding domain Thivi_3396 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3396 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC Thivi_3397 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D Thivi_3397 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD Thivi_3398 IPR007329 FMN-binding Thivi_3398 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG Thivi_3399 IPR010968 Ion-translocating oxidoreductase complex subunit E Thivi_3399 IPR003667 NqrDE/RnfAE Thivi_3400 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_3400 IPR005346 RnfH protein Thivi_3400 IPR037021 RnfH superfamily Thivi_3401 IPR002711 HNH endonuclease Thivi_3401 IPR003615 HNH nuclease Thivi_3402 IPR004114 THUMP domain Thivi_3402 IPR019614 S-adenosylmethionine-dependent methyltransferase Thivi_3402 IPR000241 Putative RNA methylase domain Thivi_3402 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3402 IPR017244 Ribosomal RNA large subunit methyltransferase K/L Thivi_3402 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_3404 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Thivi_3404 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thivi_3404 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Thivi_3404 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_3404 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3404 IPR006258 Dihydrolipoamide dehydrogenase Thivi_3404 IPR023753 FAD/NAD(P)-binding domain Thivi_3405 IPR015912 Phosphofructokinase, conserved site Thivi_3405 IPR035966 Phosphofructokinase superfamily Thivi_3405 IPR022953 ATP-dependent 6-phosphofructokinase Thivi_3405 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type Thivi_3405 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic Thivi_3405 IPR000023 Phosphofructokinase domain Thivi_3406 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thivi_3406 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex Thivi_3406 IPR000089 Biotin/lipoyl attachment Thivi_3406 IPR011053 Single hybrid motif Thivi_3406 IPR004167 Peripheral subunit-binding domain Thivi_3406 IPR036625 E3-binding domain superfamily Thivi_3406 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Thivi_3406 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Thivi_3407 IPR005474 Transketolase, N-terminal Thivi_3407 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal Thivi_3407 IPR004660 Pyruvate dehydrogenase E1 component Thivi_3407 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_3407 IPR029061 Thiamin diphosphate-binding fold Thivi_3407 IPR041621 Pyruvate dehydrogenase E1 component, middle domain Thivi_3415 IPR020846 Major facilitator superfamily domain Thivi_3415 IPR011701 Major facilitator superfamily Thivi_3415 IPR036259 MFS transporter superfamily Thivi_3416 IPR036873 Rhodanese-like domain superfamily Thivi_3416 IPR001763 Rhodanese-like domain Thivi_3417 IPR000086 NUDIX hydrolase domain Thivi_3417 IPR015376 Zinc ribbon, NADH pyrophosphatase Thivi_3417 IPR020084 NUDIX hydrolase, conserved site Thivi_3417 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_3417 IPR022925 NADH pyrophosphatase NudC Thivi_3420 IPR019634 Uncharacterised protein family Ycf49 Thivi_3422 IPR011009 Protein kinase-like domain superfamily Thivi_3422 IPR005543 PASTA domain Thivi_3422 IPR000719 Protein kinase domain Thivi_3422 IPR017441 Protein kinase, ATP binding site Thivi_3422 IPR008271 Serine/threonine-protein kinase, active site Thivi_3424 IPR015854 ABC transporter, lipoprotein release, LolD Thivi_3424 IPR017871 ABC transporter, conserved site Thivi_3424 IPR003439 ABC transporter-like Thivi_3424 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3424 IPR003593 AAA+ ATPase domain Thivi_3426 IPR005532 Sulfatase-modifying factor enzyme Thivi_3426 IPR016187 C-type lectin fold Thivi_3426 IPR042095 Sulfatase-modifying factor enzyme superfamily Thivi_3428 IPR008984 SMAD/FHA domain superfamily Thivi_3428 IPR022128 Domain of unknown function DUF3662 Thivi_3428 IPR000253 Forkhead-associated (FHA) domain Thivi_3428 IPR042287 FhaA, N-terminal Thivi_3434 IPR018027 Asn/Gln amidotransferase Thivi_3434 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Thivi_3434 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 Thivi_3434 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Thivi_3434 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Thivi_3434 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thivi_3434 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Thivi_3434 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Thivi_3434 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E Thivi_3435 IPR011283 Acetoacetyl-CoA reductase Thivi_3435 IPR036291 NAD(P)-binding domain superfamily Thivi_3435 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thivi_3435 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3437 IPR018968 Phasin Thivi_3438 IPR007897 PHB accumulation regulatory Thivi_3438 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR Thivi_3438 IPR012909 PHA accumulation regulator DNA-binding, N-terminal Thivi_3439 IPR020616 Thiolase, N-terminal Thivi_3439 IPR002155 Thiolase Thivi_3439 IPR016039 Thiolase-like Thivi_3439 IPR020610 Thiolase, active site Thivi_3439 IPR020617 Thiolase, C-terminal Thivi_3439 IPR020615 Thiolase, acyl-enzyme intermediate active site Thivi_3439 IPR020613 Thiolase, conserved site Thivi_3440 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit Thivi_3441 IPR029058 Alpha/Beta hydrolase fold Thivi_3441 IPR000073 Alpha/beta hydrolase fold-1 Thivi_3441 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit Thivi_3445 IPR002898 MotA/TolQ/ExbB proton channel Thivi_3446 IPR003400 Biopolymer transport protein ExbD/TolR Thivi_3447 IPR003538 Gram-negative bacterial TonB protein Thivi_3447 IPR037682 TonB, C-terminal Thivi_3447 IPR006260 TonB/TolA, C-terminal Thivi_3451 IPR011867 Molybdate ABC transporter, permease protein Thivi_3451 IPR035906 MetI-like superfamily Thivi_3451 IPR000515 ABC transporter type 1, transmembrane domain MetI-like Thivi_3452 IPR030287 Fe(3+) ions import ATP-binding protein FbpC Thivi_3452 IPR015853 ABC transporter, ferric cation import, FbpC Thivi_3452 IPR017871 ABC transporter, conserved site Thivi_3452 IPR003439 ABC transporter-like Thivi_3452 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3452 IPR013611 Transport-associated OB, type 2 Thivi_3452 IPR003593 AAA+ ATPase domain Thivi_3452 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_3454 IPR011006 CheY-like superfamily Thivi_3454 IPR001633 EAL domain Thivi_3454 IPR035919 EAL domain superfamily Thivi_3454 IPR000160 GGDEF domain Thivi_3454 IPR029787 Nucleotide cyclase Thivi_3454 IPR001789 Signal transduction response regulator, receiver domain Thivi_3455 IPR038521 ThiC/Bza superfamily Thivi_3455 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B Thivi_3455 IPR037509 Phosphomethylpyrimidine synthase Thivi_3455 IPR025747 ThiC-associated domain Thivi_3461 IPR000160 GGDEF domain Thivi_3461 IPR029787 Nucleotide cyclase Thivi_3461 IPR001789 Signal transduction response regulator, receiver domain Thivi_3461 IPR011006 CheY-like superfamily Thivi_3462 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thivi_3462 IPR000811 Glycosyl transferase, family 35 Thivi_3462 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Thivi_3465 IPR003439 ABC transporter-like Thivi_3465 IPR032781 ABC-transporter extension domain Thivi_3465 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3465 IPR003593 AAA+ ATPase domain Thivi_3465 IPR017871 ABC transporter, conserved site Thivi_3466 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3466 IPR025158 Mg chelatase-related protein, C-terminal domain Thivi_3466 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3466 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3466 IPR003593 AAA+ ATPase domain Thivi_3466 IPR001208 MCM domain Thivi_3466 IPR004482 Mg chelatase-related protein Thivi_3466 IPR000523 Magnesium chelatase ChlI domain Thivi_3467 IPR007475 Ubiquinone biosynthesis accessory factor UbiK Thivi_3469 IPR002332 Nitrogen regulatory protein P-II, urydylation site Thivi_3469 IPR017918 Nitrogen regulatory protein PII, conserved site Thivi_3469 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_3469 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_3469 IPR002187 Nitrogen regulatory protein PII Thivi_3470 IPR029020 Ammonium/urea transporter Thivi_3470 IPR024041 Ammonium transporter AmtB-like domain Thivi_3470 IPR001905 Ammonium transporter Thivi_3470 IPR018047 Ammonium transporter, conserved site Thivi_3471 IPR030374 Polyamine biosynthesis domain Thivi_3471 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3471 IPR001045 Spermidine/spermine synthases Thivi_3471 IPR035246 Spermidine synthase, tetramerisation domain Thivi_3471 IPR037163 Spermidine synthase, tetramerisation domain superfamily Thivi_3472 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Thivi_3472 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Thivi_3472 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Thivi_3473 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase Thivi_3473 IPR023343 Penicillin amidase type, domain 1 Thivi_3473 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3473 IPR014395 Penicillin/GL-7-ACA/AHL acylase Thivi_3473 IPR033813 Penicillin G acylase, C-terminal Thivi_3474 IPR018375 Coproporphyrinogen III oxidase, conserved site Thivi_3474 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily Thivi_3474 IPR001260 Coproporphyrinogen III oxidase, aerobic Thivi_3476 IPR036812 NADP-dependent oxidoreductase domain superfamily Thivi_3476 IPR023210 NADP-dependent oxidoreductase domain Thivi_3476 IPR020471 Aldo/keto reductase Thivi_3477 IPR000056 Ribulose-phosphate 3-epimerase-like Thivi_3477 IPR011060 Ribulose-phosphate binding barrel Thivi_3477 IPR026019 Ribulose-phosphate 3-epimerase Thivi_3477 IPR013785 Aldolase-type TIM barrel Thivi_3478 IPR037512 Phosphoglycolate phosphatase, prokaryotic Thivi_3478 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic Thivi_3478 IPR023214 HAD superfamily Thivi_3478 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_3478 IPR006439 HAD hydrolase, subfamily IA Thivi_3478 IPR036412 HAD-like superfamily Thivi_3478 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_3479 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_3479 IPR019999 Anthranilate synthase component I-like Thivi_3479 IPR005256 Anthranilate synthase component I, PabB-like Thivi_3479 IPR006805 Anthranilate synthase component I, N-terminal Thivi_3479 IPR005801 ADC synthase Thivi_3484 IPR034703 Proton/glutamate-aspartate symporter GltP Thivi_3484 IPR001991 Sodium:dicarboxylate symporter Thivi_3484 IPR033380 Glutamate-aspartate symport protein GltP/GltT Thivi_3484 IPR036458 Sodium:dicarboxylate symporter superfamily Thivi_3484 IPR018107 Sodium:dicarboxylate symporter, conserved site Thivi_3487 IPR018062 HTH domain AraC-type, conserved site Thivi_3487 IPR018060 DNA binding HTH domain, AraC-type Thivi_3487 IPR009057 Homeobox-like domain superfamily Thivi_3487 IPR020449 Transcription regulator HTH, AraC- type Thivi_3488 IPR011031 Multihaem cytochrome Thivi_3488 IPR036280 Multiheme cytochrome superfamily Thivi_3488 IPR020015 Decaheme cytochrome, c-type, DmsE Thivi_3488 IPR010177 Doubled CXXCH motif Thivi_3492 IPR009056 Cytochrome c-like domain Thivi_3492 IPR036909 Cytochrome c-like domain superfamily Thivi_3492 IPR024167 Cytochrome c4-like Thivi_3493 IPR036909 Cytochrome c-like domain superfamily Thivi_3493 IPR024167 Cytochrome c4-like Thivi_3493 IPR009056 Cytochrome c-like domain Thivi_3494 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm Thivi_3494 IPR033705 Valyl tRNA synthetase, anticodon-binding domain Thivi_3494 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3494 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thivi_3494 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3494 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thivi_3494 IPR002303 Valine-tRNA ligase Thivi_3494 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thivi_3494 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_3494 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily Thivi_3494 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Thivi_3495 IPR041527 YhcG, N-terminal Thivi_3495 IPR009362 YhcG PDDEXK nuclease domain Thivi_3501 IPR004603 DNA mismatch endonuclease vsr Thivi_3501 IPR011335 Restriction endonuclease type II-like Thivi_3519 IPR004921 Terminase large subunit, T4likevirus-type Thivi_3519 IPR012036 Bacteriophage Mu, Gp28 Thivi_3526 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_3526 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3526 IPR001091 Restriction/modification DNA-methylase Thivi_3526 IPR002941 DNA methylase N-4/N-6 Thivi_3528 IPR006522 Phage virion morphogensis protein Thivi_3542 IPR011055 Duplicated hybrid motif Thivi_3542 IPR023346 Lysozyme-like domain superfamily Thivi_3542 IPR016047 Peptidase M23 Thivi_3542 IPR010090 Phage tail tape measure protein Thivi_3542 IPR008258 Transglycosylase SLT domain 1 Thivi_3542 IPR000189 Prokaryotic transglycosylase, active site Thivi_3547 IPR002559 Transposase, IS4-like Thivi_3547 IPR032806 H repeat-associated protein, N-terminal Thivi_3552 IPR032806 H repeat-associated protein, N-terminal Thivi_3552 IPR002559 Transposase, IS4-like Thivi_3554 IPR041722 Alpha-keto acid binding periplasmic protein Thivi_3554 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_3554 IPR018389 TRAP transporter solute receptor DctP/TeaA Thivi_3554 IPR026289 Solute binding protein, TakP-like Thivi_3554 IPR038404 TRAP transporter solute receptor DctP superfamily Thivi_3555 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Thivi_3555 IPR004681 TRAP transporter large membrane protein DctM Thivi_3557 IPR016174 Di-haem cytochrome, transmembrane Thivi_3557 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thivi_3558 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Thivi_3558 IPR004488 Magnesium/cobalt transport protein CorA Thivi_3564 IPR020846 Major facilitator superfamily domain Thivi_3564 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 Thivi_3564 IPR011701 Major facilitator superfamily Thivi_3564 IPR036259 MFS transporter superfamily Thivi_3567 IPR004131 Pyrophosphate-energised proton pump Thivi_3570 IPR010017 tRNA U34 carboxymethyltransferase Thivi_3570 IPR027555 tRNA (mo5U34)-methyltransferase-like Thivi_3570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3571 IPR005271 Carboxy-S-adenosyl-L-methionine synthase Thivi_3571 IPR041698 Methyltransferase domain 25 Thivi_3571 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3572 IPR036832 Polyphosphate kinase N-terminal domain superfamily Thivi_3572 IPR041108 Polyphosphate kinase, C-terminal domain 1 Thivi_3572 IPR003414 Polyphosphate kinase Thivi_3572 IPR024953 Polyphosphate kinase middle domain Thivi_3572 IPR036830 Polyphosphate kinase middle domain superfamily Thivi_3572 IPR025200 Polyphosphate kinase C-terminal domain 2 Thivi_3572 IPR025198 Polyphosphate kinase N-terminal domain Thivi_3574 IPR003695 Ppx/GppA phosphatase Thivi_3574 IPR030673 Pyrophosphatase, GppA/Ppx-type Thivi_3574 IPR022371 Exopolyphosphatase Thivi_3576 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Thivi_3576 IPR023408 Mechanosensitive ion channel MscS domain superfamily Thivi_3576 IPR024393 Mechanosensitive ion channel MscS, porin domain Thivi_3576 IPR006685 Mechanosensitive ion channel MscS Thivi_3576 IPR011066 Mechanosensitive ion channel MscS, C-terminal Thivi_3576 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Thivi_3576 IPR006686 Mechanosensitive ion channel MscS, conserved site Thivi_3576 IPR010920 LSM domain superfamily Thivi_3577 IPR036393 Acetylglutamate kinase-like superfamily Thivi_3577 IPR016181 Acyl-CoA N-acyltransferase Thivi_3577 IPR001048 Aspartate/glutamate/uridylate kinase Thivi_3577 IPR010167 Amino-acid N-acetyltransferase Thivi_3577 IPR000182 GNAT domain Thivi_3577 IPR033719 N-acetylglutamate synthase, kinase-like domain Thivi_3578 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3578 IPR009057 Homeobox-like domain superfamily Thivi_3578 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3578 IPR002197 DNA binding HTH domain, Fis-type Thivi_3578 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3578 IPR011006 CheY-like superfamily Thivi_3578 IPR003593 AAA+ ATPase domain Thivi_3578 IPR001789 Signal transduction response regulator, receiver domain Thivi_3578 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_3578 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_3579 IPR042172 Adenosylhomocysteinase-like superfamily Thivi_3579 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Thivi_3579 IPR036291 NAD(P)-binding domain superfamily Thivi_3579 IPR000043 Adenosylhomocysteinase-like Thivi_3579 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Thivi_3583 IPR029041 FAD-linked oxidoreductase-like Thivi_3583 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase Thivi_3583 IPR003171 Methylenetetrahydrofolate reductase Thivi_3583 IPR004620 5,10-methylenetetrahydrofolate reductase Thivi_3585 IPR002559 Transposase, IS4-like Thivi_3585 IPR032806 H repeat-associated protein, N-terminal Thivi_3590 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Thivi_3590 IPR017926 Glutamine amidotransferase Thivi_3590 IPR029062 Class I glutamine amidotransferase-like Thivi_3591 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Thivi_3591 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Thivi_3591 IPR000312 Glycosyl transferase, family 3 Thivi_3591 IPR005940 Anthranilate phosphoribosyl transferase Thivi_3591 IPR017459 Glycosyl transferase family 3, N-terminal domain Thivi_3592 IPR013785 Aldolase-type TIM barrel Thivi_3592 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Thivi_3592 IPR013798 Indole-3-glycerol phosphate synthase Thivi_3592 IPR011060 Ribulose-phosphate binding barrel Thivi_3593 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3593 IPR000595 Cyclic nucleotide-binding domain Thivi_3593 IPR018488 Cyclic nucleotide-binding, conserved site Thivi_3593 IPR018490 Cyclic nucleotide-binding-like Thivi_3593 IPR014710 RmlC-like jelly roll fold Thivi_3593 IPR018335 Transcription regulator HTH, Crp-type, conserved site Thivi_3593 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3593 IPR012318 Crp-type HTH domain Thivi_3594 IPR003718 OsmC/Ohr family Thivi_3594 IPR036102 OsmC/Ohr superfamily Thivi_3594 IPR015946 K homology domain-like, alpha/beta Thivi_3595 IPR016067 S-adenosylmethionine decarboxylase, core Thivi_3595 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Thivi_3595 IPR009165 S-adenosylmethionine decarboxylase, bacterial Thivi_3596 IPR011566 Ubiquinone biosynthesis protein Coq7 Thivi_3596 IPR009078 Ferritin-like superfamily Thivi_3596 IPR012347 Ferritin-like Thivi_3597 IPR009051 Alpha-helical ferredoxin Thivi_3597 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3597 IPR004017 Cysteine-rich domain Thivi_3597 IPR012257 Glycolate oxidase, iron-sulphur subunit Thivi_3597 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3598 IPR036249 Thioredoxin-like superfamily Thivi_3599 IPR036899 Ribosomal protein L13 superfamily Thivi_3599 IPR023563 Ribosomal protein L13, conserved site Thivi_3599 IPR005823 Ribosomal protein L13, bacterial-type Thivi_3599 IPR005822 Ribosomal protein L13 Thivi_3600 IPR023035 Ribosomal protein S9, bacterial/plastid Thivi_3600 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3600 IPR020574 Ribosomal protein S9, conserved site Thivi_3600 IPR000754 Ribosomal protein S9 Thivi_3600 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3603 IPR025948 HTH-like domain Thivi_3603 IPR012337 Ribonuclease H-like superfamily Thivi_3603 IPR036397 Ribonuclease H superfamily Thivi_3603 IPR001584 Integrase, catalytic core Thivi_3605 IPR001650 Helicase, C-terminal Thivi_3605 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3605 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3605 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3605 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_3605 IPR028619 ATP-dependent RNA helicase DbpA Thivi_3605 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_3605 IPR011545 DEAD/DEAH box helicase domain Thivi_3605 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Thivi_3607 IPR002559 Transposase, IS4-like Thivi_3607 IPR032806 H repeat-associated protein, N-terminal Thivi_3614 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_3614 IPR003010 Carbon-nitrogen hydrolase Thivi_3614 IPR004563 Apolipoprotein N-acyltransferase Thivi_3616 IPR036565 Mur-like, catalytic domain superfamily Thivi_3616 IPR000713 Mur ligase, N-terminal catalytic domain Thivi_3616 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_3616 IPR005757 Murein peptide ligase Thivi_3616 IPR004101 Mur ligase, C-terminal Thivi_3616 IPR013221 Mur ligase, central Thivi_3617 IPR036551 Flavin prenyltransferase-like Thivi_3617 IPR003382 Flavoprotein Thivi_3617 IPR004507 Flavin prenyltransferase UbiX-like Thivi_3619 IPR000873 AMP-dependent synthetase/ligase Thivi_3619 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_3619 IPR023775 Bifunctional protein Aas Thivi_3619 IPR042099 AMP-dependent synthetase-like superfamily Thivi_3619 IPR002123 Phospholipid/glycerol acyltransferase Thivi_3619 IPR020845 AMP-binding, conserved site Thivi_3620 IPR023214 HAD superfamily Thivi_3620 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Thivi_3620 IPR036412 HAD-like superfamily Thivi_3621 IPR022927 RNA pyrophosphohydrolase RppH Thivi_3621 IPR000086 NUDIX hydrolase domain Thivi_3621 IPR020084 NUDIX hydrolase, conserved site Thivi_3621 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_3621 IPR020476 NUDIX hydrolase Thivi_3622 IPR036637 Phosphohistidine domain superfamily Thivi_3622 IPR018274 PEP-utilising enzyme, active site Thivi_3622 IPR003018 GAF domain Thivi_3622 IPR029016 GAF-like domain superfamily Thivi_3622 IPR040442 Pyruvate kinase-like domain superfamily Thivi_3622 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_3622 IPR036618 PtsI, HPr-binding domain superfamily Thivi_3622 IPR008279 PEP-utilising enzyme, mobile domain Thivi_3622 IPR000121 PEP-utilising enzyme, C-terminal Thivi_3622 IPR023151 PEP-utilising enzyme, conserved site Thivi_3622 IPR006318 Phosphotransferase system, enzyme I-like Thivi_3622 IPR008731 Phosphotransferase system, enzyme I N-terminal Thivi_3624 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_3625 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Thivi_3625 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Thivi_3625 IPR036291 NAD(P)-binding domain superfamily Thivi_3625 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Thivi_3625 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Thivi_3627 IPR002931 Transglutaminase-like Thivi_3627 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal Thivi_3627 IPR025403 Domain of unknown function DUF4129 Thivi_3627 IPR038765 Papain-like cysteine peptidase superfamily Thivi_3644 IPR004107 Integrase, SAM-like, N-terminal Thivi_3644 IPR010998 Integrase/recombinase, N-terminal Thivi_3644 IPR002104 Integrase, catalytic domain Thivi_3644 IPR013762 Integrase-like, catalytic domain superfamily Thivi_3644 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_3646 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase Thivi_3647 IPR000392 NifH/frxC family Thivi_3647 IPR005977 Nitrogenase iron protein NifH Thivi_3647 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3647 IPR030655 NifH/chlL conserved site Thivi_3648 IPR010143 Nitrogenase component 1, alpha chain Thivi_3648 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_3648 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Thivi_3648 IPR000318 Nitrogenase component 1, conserved site Thivi_3649 IPR000318 Nitrogenase component 1, conserved site Thivi_3649 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal Thivi_3649 IPR005976 Nitrogenase molybdenum-iron protein beta chain Thivi_3649 IPR000510 Nitrogenase/oxidoreductase, component 1 Thivi_3650 IPR024044 NifT/FixU barrel-like domain superfamily Thivi_3650 IPR009727 NifT/FixU Thivi_3651 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3651 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3652 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_3652 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal Thivi_3652 IPR038127 NafY, N-terminal domain superfamily Thivi_3652 IPR034169 NifX-like domain Thivi_3652 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_3654 IPR011989 Armadillo-like helical Thivi_3654 IPR016024 Armadillo-type fold Thivi_3654 IPR004830 Leucine rich repeat variant Thivi_3654 IPR008665 LRV FeS4 cluster Thivi_3657 IPR000811 Glycosyl transferase, family 35 Thivi_3657 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thivi_3657 IPR035090 Phosphorylase pyridoxal-phosphate attachment site Thivi_3659 IPR000802 Arsenical pump membrane protein, ArsB Thivi_3659 IPR004680 Citrate transporter-like domain Thivi_3660 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_3660 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter Thivi_3661 IPR002549 Transmembrane protein TqsA-like Thivi_3663 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3663 IPR016898 Polyphosphate kinase 2 Thivi_3663 IPR022486 Polyphosphate kinase 2, PA0141 Thivi_3663 IPR022488 Polyphosphate kinase-2-related Thivi_3671 IPR011547 SLC26A/SulP transporter domain Thivi_3671 IPR001902 SLC26A/SulP transporter Thivi_3671 IPR002645 STAS domain Thivi_3671 IPR036513 STAS domain superfamily Thivi_3675 IPR038110 Threonine dehydratase, ACT-like domain superfamily Thivi_3675 IPR001721 Threonine dehydratase, ACT-like domain Thivi_3675 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Thivi_3675 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_3675 IPR005787 Threonine dehydratase, biosynthetic Thivi_3675 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_3676 IPR010979 Ribosomal protein S13-like, H2TH Thivi_3676 IPR010663 Zinc finger, FPG/IleRS-type Thivi_3676 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type Thivi_3676 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding Thivi_3676 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site Thivi_3676 IPR020629 Formamidopyrimidine-DNA glycosylase Thivi_3676 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain Thivi_3676 IPR035937 MutM-like, N-terminal Thivi_3679 IPR001296 Glycosyl transferase, family 1 Thivi_3683 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Thivi_3683 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Thivi_3683 IPR023406 DNA topoisomerase, type IA, active site Thivi_3683 IPR003601 DNA topoisomerase, type IA, domain 2 Thivi_3683 IPR000380 DNA topoisomerase, type IA Thivi_3683 IPR005738 DNA topoisomerase III Thivi_3683 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Thivi_3683 IPR034144 DNA topoisomerase 3-like, TOPRIM domain Thivi_3683 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Thivi_3683 IPR013497 DNA topoisomerase, type IA, central Thivi_3683 IPR006171 TOPRIM domain Thivi_3683 IPR023405 DNA topoisomerase, type IA, core domain Thivi_3684 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_3684 IPR006597 Sel1-like repeat Thivi_3687 IPR012676 TGS-like Thivi_3687 IPR012675 Beta-grasp domain superfamily Thivi_3687 IPR002912 ACT domain Thivi_3687 IPR004095 TGS Thivi_3687 IPR007685 RelA/SpoT Thivi_3687 IPR003607 HD/PDEase domain Thivi_3687 IPR004811 RelA/SpoT family Thivi_3687 IPR033655 RelA, TGS domain Thivi_3689 IPR003607 HD/PDEase domain Thivi_3689 IPR011006 CheY-like superfamily Thivi_3689 IPR001789 Signal transduction response regulator, receiver domain Thivi_3689 IPR037522 HD-GYP domain Thivi_3690 IPR001789 Signal transduction response regulator, receiver domain Thivi_3690 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_3690 IPR036641 HPT domain superfamily Thivi_3690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3690 IPR005467 Histidine kinase domain Thivi_3690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3690 IPR011006 CheY-like superfamily Thivi_3690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3690 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3691 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3691 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3691 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3691 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3691 IPR005467 Histidine kinase domain Thivi_3691 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3691 IPR003660 HAMP domain Thivi_3692 IPR011006 CheY-like superfamily Thivi_3692 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_3692 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_3692 IPR001789 Signal transduction response regulator, receiver domain Thivi_3692 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3692 IPR039420 Transcriptional regulatory protein WalR-like Thivi_3695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3695 IPR007848 Methyltransferase small domain Thivi_3696 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_3697 IPR037254 HupF/HypC superfamily Thivi_3697 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 IPR019812 Hydrogenase assembly chaperone, conserved site Thivi_3698 IPR002780 Hydrogenase formation HypD protein Thivi_3698 IPR042243 HypD, domain 2 Thivi_3698 IPR042244 HypD, domain 1 Thivi_3700 IPR036921 PurM-like, N-terminal domain superfamily Thivi_3700 IPR016188 PurM-like, N-terminal domain Thivi_3700 IPR036676 PurM-like, C-terminal domain superfamily Thivi_3700 IPR011854 Carbamoyl dehydratase HypE Thivi_3700 IPR010918 PurM-like, C-terminal domain Thivi_3703 IPR005119 LysR, substrate-binding Thivi_3703 IPR000847 Transcription regulator HTH, LysR Thivi_3703 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3703 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3704 IPR005888 dTDP-glucose 4,6-dehydratase Thivi_3704 IPR016040 NAD(P)-binding domain Thivi_3704 IPR036291 NAD(P)-binding domain superfamily Thivi_3705 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form Thivi_3705 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3705 IPR005835 Nucleotidyl transferase domain Thivi_3706 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Thivi_3706 IPR011051 RmlC-like cupin domain superfamily Thivi_3706 IPR014710 RmlC-like jelly roll fold Thivi_3707 IPR005913 dTDP-4-dehydrorhamnose reductase family Thivi_3707 IPR036291 NAD(P)-binding domain superfamily Thivi_3707 IPR029903 RmlD-like substrate binding domain Thivi_3708 IPR032816 SNARE associated Golgi protein Thivi_3714 IPR002559 Transposase, IS4-like Thivi_3714 IPR032806 H repeat-associated protein, N-terminal Thivi_3717 IPR032806 H repeat-associated protein, N-terminal Thivi_3717 IPR002559 Transposase, IS4-like Thivi_3718 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_3718 IPR011006 CheY-like superfamily Thivi_3718 IPR001789 Signal transduction response regulator, receiver domain Thivi_3718 IPR000792 Transcription regulator LuxR, C-terminal Thivi_3718 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3723 IPR013762 Integrase-like, catalytic domain superfamily Thivi_3723 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_3723 IPR002104 Integrase, catalytic domain Thivi_3723 IPR010998 Integrase/recombinase, N-terminal Thivi_3723 IPR004107 Integrase, SAM-like, N-terminal Thivi_3723 IPR011932 Tyrosine recombinase XerD Thivi_3723 IPR023009 Tyrosine recombinase XerC/XerD Thivi_3724 IPR035571 UPF0234-like, C-terminal Thivi_3724 IPR036183 YajQ-like superfamily Thivi_3724 IPR007551 Protein of unknown function DUF520 Thivi_3724 IPR035570 UPF0234, N-terminal Thivi_3725 IPR017937 Thioredoxin, conserved site Thivi_3725 IPR033954 Disulphide bond isomerase, DsbC/G Thivi_3725 IPR013766 Thioredoxin domain Thivi_3725 IPR012336 Thioredoxin-like fold Thivi_3725 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Thivi_3725 IPR036249 Thioredoxin-like superfamily Thivi_3725 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily Thivi_3726 IPR001932 PPM-type phosphatase domain Thivi_3726 IPR036457 PPM-type phosphatase domain superfamily Thivi_3726 IPR015655 Protein phosphatase 2C family Thivi_3735 IPR032806 H repeat-associated protein, N-terminal Thivi_3735 IPR002559 Transposase, IS4-like Thivi_3738 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Thivi_3738 IPR007860 DNA mismatch repair protein MutS, connector domain Thivi_3738 IPR036678 MutS, connector domain superfamily Thivi_3738 IPR016151 DNA mismatch repair protein MutS, N-terminal Thivi_3738 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Thivi_3738 IPR000432 DNA mismatch repair protein MutS, C-terminal Thivi_3738 IPR005748 DNA mismatch repair protein MutS Thivi_3738 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3738 IPR007861 DNA mismatch repair protein MutS, clamp Thivi_3738 IPR017261 DNA mismatch repair protein MutS/MSH Thivi_3738 IPR007696 DNA mismatch repair protein MutS, core Thivi_3739 IPR036737 OmpA-like domain superfamily Thivi_3739 IPR027385 Outer membrane protein beta-barrel domain Thivi_3739 IPR006664 Outer membrane protein, bacterial Thivi_3739 IPR006665 OmpA-like domain Thivi_3739 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Thivi_3743 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Thivi_3743 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Thivi_3744 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily Thivi_3744 IPR014349 Rieske iron-sulphur protein Thivi_3744 IPR005805 Rieske iron-sulphur protein, C-terminal Thivi_3744 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Thivi_3744 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Thivi_3744 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thivi_3745 IPR036150 Cytochrome b/b6, C-terminal domain superfamily Thivi_3745 IPR016174 Di-haem cytochrome, transmembrane Thivi_3745 IPR030689 Cytochrome b Thivi_3745 IPR027387 Cytochrome b/b6-like domain superfamily Thivi_3745 IPR005798 Cytochrome b/b6, C-terminal Thivi_3745 IPR005797 Cytochrome b/b6, N-terminal Thivi_3746 IPR002326 Cytochrome c1 Thivi_3746 IPR009056 Cytochrome c-like domain Thivi_3746 IPR036909 Cytochrome c-like domain superfamily Thivi_3747 IPR004045 Glutathione S-transferase, N-terminal Thivi_3747 IPR034341 Stringent starvation protein A, N-terminal Thivi_3747 IPR004046 Glutathione S-transferase, C-terminal Thivi_3747 IPR040079 Glutathione Transferase family Thivi_3747 IPR036249 Thioredoxin-like superfamily Thivi_3747 IPR010987 Glutathione S-transferase, C-terminal-like Thivi_3747 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Thivi_3748 IPR036760 SspB-like superfamily Thivi_3748 IPR007481 Stringent starvation protein B Thivi_3750 IPR007457 Fe(II) trafficking protein YggX Thivi_3750 IPR036766 Fe(II) trafficking protein YggX superfamily Thivi_3751 IPR005760 A/G-specific adenine glycosylase MutY Thivi_3751 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Thivi_3751 IPR004036 Endonuclease III-like, conserved site-2 Thivi_3751 IPR011257 DNA glycosylase Thivi_3751 IPR015797 NUDIX hydrolase-like domain superfamily Thivi_3751 IPR004035 Endonuclease III, iron-sulphur binding site Thivi_3751 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Thivi_3751 IPR029119 MutY, C-terminal Thivi_3751 IPR000445 Helix-hairpin-helix motif Thivi_3751 IPR003265 HhH-GPD domain Thivi_3753 IPR020845 AMP-binding, conserved site Thivi_3753 IPR000873 AMP-dependent synthetase/ligase Thivi_3753 IPR042099 AMP-dependent synthetase-like superfamily Thivi_3755 IPR034415 CsdA, RNA recognition motif Thivi_3755 IPR014014 RNA helicase, DEAD-box type, Q motif Thivi_3755 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_3755 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3755 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3755 IPR011545 DEAD/DEAH box helicase domain Thivi_3755 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3755 IPR001650 Helicase, C-terminal Thivi_3755 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Thivi_3755 IPR028618 ATP-dependent RNA helicase DeaD Thivi_3756 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_3756 IPR038527 HupH, C-terminal domain superfamily Thivi_3757 IPR023430 Peptidase HybD-like domain superfamily Thivi_3757 IPR004419 Peptidase A31, hydrogenase expression/formation protein Thivi_3757 IPR000671 Peptidase A31 family Thivi_3758 IPR016174 Di-haem cytochrome, transmembrane Thivi_3758 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit Thivi_3758 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thivi_3759 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thivi_3759 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_3759 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_3760 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_3760 IPR001821 [NiFe]-hydrogenase, small subunit Thivi_3760 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_3760 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_3760 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_3760 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3760 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_3764 IPR011840 Pullulanase, type I Thivi_3764 IPR014756 Immunoglobulin E-set Thivi_3764 IPR017853 Glycoside hydrolase superfamily Thivi_3764 IPR004193 Glycoside hydrolase, family 13, N-terminal Thivi_3764 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_3764 IPR040697 Pullulanase, N1 domain Thivi_3764 IPR013780 Glycosyl hydrolase, all-beta Thivi_3764 IPR013783 Immunoglobulin-like fold Thivi_3766 IPR029066 PLP-binding barrel Thivi_3766 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Thivi_3766 IPR001608 Alanine racemase, N-terminal Thivi_3766 IPR011079 Alanine racemase, C-terminal Thivi_3766 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thivi_3766 IPR000821 Alanine racemase Thivi_3770 IPR003660 HAMP domain Thivi_3770 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_3770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3770 IPR036641 HPT domain superfamily Thivi_3770 IPR019247 Histidine kinase BarA, N-terminal Thivi_3770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3770 IPR005467 Histidine kinase domain Thivi_3770 IPR011006 CheY-like superfamily Thivi_3770 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3770 IPR001789 Signal transduction response regulator, receiver domain Thivi_3771 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Thivi_3771 IPR013785 Aldolase-type TIM barrel Thivi_3771 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thivi_3771 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thivi_3771 IPR000891 Pyruvate carboxyltransferase Thivi_3771 IPR005671 2-isopropylmalate synthase, bacterial-type Thivi_3772 IPR005273 Uracil-DNA glycosylase family 4 Thivi_3772 IPR005122 Uracil-DNA glycosylase-like Thivi_3772 IPR036895 Uracil-DNA glycosylase-like domain superfamily Thivi_3774 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_3774 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Thivi_3775 IPR001296 Glycosyl transferase, family 1 Thivi_3775 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_3778 IPR018107 Sodium:dicarboxylate symporter, conserved site Thivi_3778 IPR036458 Sodium:dicarboxylate symporter superfamily Thivi_3778 IPR023954 C4-dicarboxylate transport protein Thivi_3778 IPR001991 Sodium:dicarboxylate symporter Thivi_3779 IPR036565 Mur-like, catalytic domain superfamily Thivi_3779 IPR036615 Mur ligase, C-terminal domain superfamily Thivi_3779 IPR013221 Mur ligase, central Thivi_3779 IPR000713 Mur ligase, N-terminal catalytic domain Thivi_3779 IPR035911 MurE/MurF, N-terminal Thivi_3779 IPR004101 Mur ligase, C-terminal Thivi_3779 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Thivi_3783 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_3783 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase Thivi_3783 IPR007197 Radical SAM Thivi_3783 IPR002792 TRAM domain Thivi_3783 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_3783 IPR013848 Methylthiotransferase, N-terminal Thivi_3783 IPR020612 Methylthiotransferase, conserved site Thivi_3783 IPR005839 Methylthiotransferase Thivi_3783 IPR006638 Elp3/MiaB/NifB Thivi_3783 IPR006467 MiaB-like tRNA modifying enzyme Thivi_3786 IPR008334 5'-Nucleotidase, C-terminal Thivi_3786 IPR036907 5'-Nucleotidase, C-terminal domain superfamily Thivi_3786 IPR006146 5'-Nucleotidase, conserved site Thivi_3786 IPR006179 5'-Nucleotidase/apyrase Thivi_3786 IPR041827 CpdB, N-terminal metallophosphatase domain Thivi_3786 IPR019931 LPXTG cell wall anchor domain Thivi_3786 IPR029052 Metallo-dependent phosphatase-like Thivi_3786 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_3789 IPR015942 Asp/Glu/hydantoin racemase Thivi_3789 IPR001920 Asp/Glu racemase Thivi_3789 IPR018187 Asp/Glu racemase, active site 1 Thivi_3789 IPR033134 Asp/Glu racemase, active site 2 Thivi_3789 IPR004391 Glutamate racemase Thivi_3791 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily Thivi_3791 IPR002569 Peptide methionine sulphoxide reductase MsrA Thivi_3794 IPR008909 DALR anticodon binding Thivi_3794 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Thivi_3794 IPR001278 Arginine-tRNA ligase Thivi_3794 IPR035684 Arginyl-tRNA synthetase, catalytic core domain Thivi_3794 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3794 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily Thivi_3794 IPR005148 Arginyl tRNA synthetase N-terminal domain Thivi_3795 IPR005259 Primosomal protein N' Thivi_3795 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain Thivi_3795 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3795 IPR001650 Helicase, C-terminal Thivi_3795 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3795 IPR011545 DEAD/DEAH box helicase domain Thivi_3795 IPR041222 Primosomal protein N', 3' DNA-binding domain Thivi_3795 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily Thivi_3795 IPR041236 Primosomal protein N, C-terminal domain Thivi_3803 IPR036909 Cytochrome c-like domain superfamily Thivi_3803 IPR025710 L-cysteine S-thiosulfotransferase subunit SoxA Thivi_3805 IPR002898 MotA/TolQ/ExbB proton channel Thivi_3806 IPR003400 Biopolymer transport protein ExbD/TolR Thivi_3807 IPR003593 AAA+ ATPase domain Thivi_3807 IPR011527 ABC transporter type 1, transmembrane domain Thivi_3807 IPR017871 ABC transporter, conserved site Thivi_3807 IPR011917 ABC transporter, lipid A export, MsbA Thivi_3807 IPR039421 Type I protein exporter Thivi_3807 IPR003439 ABC transporter-like Thivi_3807 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3807 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_3808 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3808 IPR003758 Tetraacyldisaccharide 4'-kinase Thivi_3809 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase Thivi_3809 IPR003329 Acylneuraminate cytidylyltransferase Thivi_3809 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3810 IPR014083 Cation/acetate symporter ActP Thivi_3810 IPR038377 Sodium/glucose symporter superfamily Thivi_3810 IPR018212 Sodium/solute symporter, conserved site Thivi_3810 IPR001734 Sodium/solute symporter Thivi_3811 IPR007436 Protein of unknown function DUF485 Thivi_3812 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Thivi_3812 IPR001295 Dihydroorotate dehydrogenase, conserved site Thivi_3812 IPR024920 Dihydroorotate dehydrogenase, class 1 Thivi_3812 IPR033888 Dihydroorotate dehydrogenase, class 1B Thivi_3812 IPR013785 Aldolase-type TIM barrel Thivi_3812 IPR005720 Dihydroorotate dehydrogenase domain Thivi_3813 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Thivi_3813 IPR011895 Pyruvate-flavodoxin oxidoreductase Thivi_3813 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Thivi_3813 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II Thivi_3813 IPR029061 Thiamin diphosphate-binding fold Thivi_3813 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thivi_3813 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3813 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3813 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Thivi_3813 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Thivi_3813 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain Thivi_3813 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Thivi_3814 IPR006464 N-acetyltransferase RimI/Ard1 Thivi_3814 IPR016181 Acyl-CoA N-acyltransferase Thivi_3814 IPR000182 GNAT domain Thivi_3818 IPR016099 Prismane-like, alpha/beta-sandwich Thivi_3818 IPR016100 Prismane, alpha-bundle Thivi_3818 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Thivi_3818 IPR010048 Hydroxylamine reductase Thivi_3818 IPR011254 Prismane-like superfamily Thivi_3821 IPR012938 Glucose/Sorbosone dehydrogenase Thivi_3821 IPR011042 Six-bladed beta-propeller, TolB-like Thivi_3821 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase Thivi_3822 IPR005330 MHYT domain Thivi_3822 IPR029787 Nucleotide cyclase Thivi_3822 IPR000160 GGDEF domain Thivi_3822 IPR035919 EAL domain superfamily Thivi_3822 IPR001633 EAL domain Thivi_3824 IPR000120 Amidase Thivi_3824 IPR020556 Amidase, conserved site Thivi_3824 IPR023631 Amidase signature domain Thivi_3824 IPR036928 Amidase signature (AS) superfamily Thivi_3824 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Thivi_3825 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C Thivi_3825 IPR003837 Glu-tRNAGln amidotransferase C subunit Thivi_3826 IPR004753 Cell shape determining protein MreB Thivi_3827 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 Thivi_3827 IPR007221 Rod shape-determining protein MreC Thivi_3827 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 Thivi_3829 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3829 IPR017790 Penicillin-binding protein 2 Thivi_3829 IPR001460 Penicillin-binding protein, transpeptidase Thivi_3829 IPR036138 Penicillin-binding protein, dimerisation domain superfamily Thivi_3829 IPR005311 Penicillin-binding protein, dimerisation domain Thivi_3830 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB Thivi_3830 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Thivi_3830 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA Thivi_3831 IPR023346 Lysozyme-like domain superfamily Thivi_3831 IPR011757 Lytic transglycosylase MltB Thivi_3831 IPR031304 Transglycosylase SLT domain 2 Thivi_3832 IPR036680 Sporulation-like domain superfamily Thivi_3832 IPR007730 Sporulation-like domain Thivi_3832 IPR034718 Endolytic peptidoglycan transglycosylase RlpA Thivi_3832 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_3832 IPR036908 RlpA-like domain superfamily Thivi_3832 IPR012997 Rare lipoprotein A Thivi_3833 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Thivi_3833 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Thivi_3833 IPR015956 Penicillin-binding protein, C-terminal domain superfamily Thivi_3833 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Thivi_3833 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3833 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily Thivi_3834 IPR027471 YbeD-like domain superfamily Thivi_3834 IPR007454 Uncharacterised protein family UPF0250 Thivi_3835 IPR000544 Octanoyltransferase Thivi_3835 IPR020605 Octanoyltransferase, conserved site Thivi_3835 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain Thivi_3836 IPR024899 Nitrogen fixation-sustaining protein CowN Thivi_3840 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Thivi_3840 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Thivi_3840 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thivi_3840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3840 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Thivi_3840 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thivi_3840 IPR033910 Glutamyl-tRNA synthetase Thivi_3840 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Thivi_3842 IPR036511 Queuine tRNA-ribosyltransferase-like Thivi_3842 IPR004803 tRNA-guanine transglycosylase Thivi_3842 IPR002616 tRNA-guanine(15) transglycosylase-like Thivi_3843 IPR002068 Alpha crystallin/Hsp20 domain Thivi_3843 IPR031107 Small heat shock protein HSP20 Thivi_3843 IPR008978 HSP20-like chaperone Thivi_3844 IPR036291 NAD(P)-binding domain superfamily Thivi_3844 IPR013332 Ketopantoate reductase, N-terminal domain Thivi_3844 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_3844 IPR013752 Ketopantoate reductase, C-terminal domain Thivi_3844 IPR003710 Ketopantoate reductase ApbA/PanE Thivi_3844 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Thivi_3845 IPR018201 Beta-ketoacyl synthase, active site Thivi_3845 IPR011032 GroES-like superfamily Thivi_3845 IPR013154 Alcohol dehydrogenase, N-terminal Thivi_3845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_3845 IPR036736 ACP-like superfamily Thivi_3845 IPR014043 Acyl transferase Thivi_3845 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Thivi_3845 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_3845 IPR016039 Thiolase-like Thivi_3845 IPR006162 Phosphopantetheine attachment site Thivi_3845 IPR009081 Phosphopantetheine binding ACP domain Thivi_3845 IPR036299 Polyketide synthase, docking domain superfmaily Thivi_3845 IPR014031 Beta-ketoacyl synthase, C-terminal Thivi_3845 IPR013968 Polyketide synthase, ketoreductase domain Thivi_3845 IPR001227 Acyl transferase domain superfamily Thivi_3845 IPR042104 Polyketide synthase, dehydratase domain superfamily Thivi_3845 IPR020807 Polyketide synthase, dehydratase domain Thivi_3845 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thivi_3845 IPR032821 Ketoacyl-synthetase, C-terminal extension Thivi_3845 IPR036291 NAD(P)-binding domain superfamily Thivi_3845 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Thivi_3845 IPR020843 Polyketide synthase, enoylreductase domain Thivi_3847 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3847 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Thivi_3847 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase Thivi_3847 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type Thivi_3854 IPR006255 Dihydrolipoamide succinyltransferase Thivi_3854 IPR011053 Single hybrid motif Thivi_3854 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Thivi_3854 IPR000089 Biotin/lipoyl attachment Thivi_3854 IPR004167 Peripheral subunit-binding domain Thivi_3854 IPR036625 E3-binding domain superfamily Thivi_3854 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Thivi_3854 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thivi_3855 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3855 IPR029061 Thiamin diphosphate-binding fold Thivi_3855 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily Thivi_3855 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal Thivi_3855 IPR001017 Dehydrogenase, E1 component Thivi_3855 IPR011603 2-oxoglutarate dehydrogenase E1 component Thivi_3855 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain Thivi_3859 IPR003660 HAMP domain Thivi_3859 IPR005467 Histidine kinase domain Thivi_3859 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3859 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3859 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3859 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3859 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3860 IPR039420 Transcriptional regulatory protein WalR-like Thivi_3860 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_3860 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_3860 IPR011006 CheY-like superfamily Thivi_3860 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3860 IPR001789 Signal transduction response regulator, receiver domain Thivi_3864 IPR001567 Peptidase M3A/M3B catalytic domain Thivi_3864 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Thivi_3866 IPR023677 UbiD decarboxylyase, bacteria Thivi_3866 IPR002830 UbiD decarboxylyase family Thivi_3867 IPR000504 RNA recognition motif domain Thivi_3867 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3867 IPR035979 RNA-binding domain superfamily Thivi_3870 IPR036291 NAD(P)-binding domain superfamily Thivi_3870 IPR001509 NAD-dependent epimerase/dehydratase Thivi_3871 IPR017938 Riboflavin synthase-like beta-barrel Thivi_3871 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_3871 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_3871 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thivi_3871 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thivi_3871 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3871 IPR017927 FAD-binding domain, ferredoxin reductase-type Thivi_3871 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Thivi_3871 IPR012675 Beta-grasp domain superfamily Thivi_3881 IPR003325 TerD domain Thivi_3883 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily Thivi_3883 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Thivi_3883 IPR039793 Uroporphyrinogen-III synthase Thivi_3884 IPR000860 Porphobilinogen deaminase Thivi_3884 IPR022418 Porphobilinogen deaminase, C-terminal Thivi_3884 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily Thivi_3884 IPR022417 Porphobilinogen deaminase, N-terminal Thivi_3884 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site Thivi_3891 IPR032806 H repeat-associated protein, N-terminal Thivi_3891 IPR002559 Transposase, IS4-like Thivi_3898 IPR004680 Citrate transporter-like domain Thivi_3898 IPR000802 Arsenical pump membrane protein, ArsB Thivi_3899 IPR005584 DNA gyrase inhibitor YacG Thivi_3899 IPR013088 Zinc finger, NHR/GATA-type Thivi_3900 IPR009777 Cell division protein ZapD Thivi_3900 IPR036268 ZapD domain superfamily Thivi_3900 IPR027462 Z ring-associated protein D, C-terminal Thivi_3902 IPR002641 Patatin-like phospholipase domain Thivi_3902 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_3902 IPR001423 Lysophospholipase patatin, conserved site Thivi_3905 IPR000055 Restriction endonuclease, type I, HsdS Thivi_3908 IPR023620 Small protein B Thivi_3908 IPR020081 SsrA-binding protein, conserved site Thivi_3908 IPR000037 SsrA-binding protein Thivi_3909 IPR013785 Aldolase-type TIM barrel Thivi_3909 IPR035990 Triosephosphate isomerase superfamily Thivi_3909 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Thivi_3909 IPR000652 Triosephosphate isomerase Thivi_3909 IPR020861 Triosephosphate isomerase, active site Thivi_3910 IPR004692 Preprotein translocase SecG subunit Thivi_3912 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Thivi_3912 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Thivi_3912 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid Thivi_3913 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thivi_3913 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_3914 IPR010218 NADH dehydrogenase, subunit C Thivi_3914 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Thivi_3914 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thivi_3914 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site Thivi_3915 IPR001135 NADH-quinone oxidoreductase, subunit D Thivi_3915 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_3915 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Thivi_3915 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thivi_3915 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Thivi_3916 IPR036249 Thioredoxin-like superfamily Thivi_3916 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal Thivi_3916 IPR042128 NuoE domain Thivi_3916 IPR002023 NADH-quinone oxidoreductase subunit E-like Thivi_3917 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain Thivi_3917 IPR019554 Soluble ligand binding domain Thivi_3917 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Thivi_3917 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Thivi_3917 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Thivi_3917 IPR011537 NADH ubiquinone oxidoreductase, F subunit Thivi_3917 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Thivi_3918 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Thivi_3918 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Thivi_3918 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Thivi_3918 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_3918 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_3918 IPR006656 Molybdopterin oxidoreductase Thivi_3918 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_3918 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal Thivi_3918 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Thivi_3918 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal Thivi_3918 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_3918 IPR006656 Molybdopterin oxidoreductase Thivi_3918 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_3918 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_3918 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Thivi_3918 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Thivi_3919 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thivi_3919 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Thivi_3920 IPR010226 NADH-quinone oxidoreductase, chain I Thivi_3920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3920 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3921 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ Thivi_3921 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 Thivi_3922 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K Thivi_3922 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_3923 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 Thivi_3923 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Thivi_3923 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Thivi_3923 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_3924 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_3924 IPR003918 NADH:ubiquinone oxidoreductase Thivi_3924 IPR010227 NADH-quinone oxidoreductase, chain M/4 Thivi_3924 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal Thivi_3925 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Thivi_3925 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_3926 IPR020624 Schiff base-forming aldolase, conserved site Thivi_3926 IPR020625 Schiff base-forming aldolase, active site Thivi_3926 IPR002220 DapA-like Thivi_3926 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Thivi_3926 IPR013785 Aldolase-type TIM barrel Thivi_3927 IPR042268 Outer membrane protein assembly factor BamC, C-terminal Thivi_3927 IPR014524 Outer membrane protein assembly factor BamC Thivi_3927 IPR010653 NlpB/DapX lipoprotein Thivi_3928 IPR029787 Nucleotide cyclase Thivi_3928 IPR000160 GGDEF domain Thivi_3928 IPR001789 Signal transduction response regulator, receiver domain Thivi_3928 IPR011006 CheY-like superfamily Thivi_3934 IPR016174 Di-haem cytochrome, transmembrane Thivi_3934 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thivi_3936 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thivi_3936 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_3936 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_3936 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_3936 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_3936 IPR001821 [NiFe]-hydrogenase, small subunit Thivi_3936 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3937 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3937 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3937 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3938 IPR005614 NrfD family Thivi_3939 IPR029014 [NiFe]-hydrogenase, large subunit Thivi_3939 IPR001501 Nickel-dependent hydrogenase, large subunit Thivi_3939 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thivi_3940 IPR023430 Peptidase HybD-like domain superfamily Thivi_3940 IPR000671 Peptidase A31 family Thivi_3940 IPR004419 Peptidase A31, hydrogenase expression/formation protein Thivi_3945 IPR006120 Resolvase, HTH domain Thivi_3945 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Thivi_3945 IPR006119 Resolvase, N-terminal catalytic domain Thivi_3945 IPR006118 Recombinase, conserved site Thivi_3948 IPR003593 AAA+ ATPase domain Thivi_3948 IPR011006 CheY-like superfamily Thivi_3948 IPR009057 Homeobox-like domain superfamily Thivi_3948 IPR002197 DNA binding HTH domain, Fis-type Thivi_3948 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3948 IPR001789 Signal transduction response regulator, receiver domain Thivi_3948 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_3948 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_3948 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3948 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3949 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3949 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3949 IPR029151 Periplasmic sensor-like domain superfamily Thivi_3949 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3949 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3949 IPR005467 Histidine kinase domain Thivi_3949 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3954 IPR036094 Quinolinate synthetase A superfamily Thivi_3954 IPR023513 Quinolinate synthase A, type 1 Thivi_3954 IPR003473 Quinolinate synthetase A Thivi_3957 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3957 IPR001036 Acriflavin resistance protein Thivi_3963 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_3963 IPR005490 L,D-transpeptidase catalytic domain Thivi_3964 IPR036779 LysM domain superfamily Thivi_3964 IPR018392 LysM domain Thivi_3964 IPR000189 Prokaryotic transglycosylase, active site Thivi_3964 IPR008258 Transglycosylase SLT domain 1 Thivi_3964 IPR023346 Lysozyme-like domain superfamily Thivi_3966 IPR002156 Ribonuclease H domain Thivi_3966 IPR022892 Ribonuclease HI Thivi_3966 IPR012337 Ribonuclease H-like superfamily Thivi_3966 IPR036397 Ribonuclease H superfamily Thivi_3967 IPR006309 DNA polymerase 3, epsilon subunit Thivi_3967 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_3967 IPR012337 Ribonuclease H-like superfamily Thivi_3967 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain Thivi_3967 IPR036397 Ribonuclease H superfamily Thivi_3968 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3968 IPR018490 Cyclic nucleotide-binding-like Thivi_3968 IPR000595 Cyclic nucleotide-binding domain Thivi_3968 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3968 IPR014710 RmlC-like jelly roll fold Thivi_3968 IPR018335 Transcription regulator HTH, Crp-type, conserved site Thivi_3968 IPR012318 Crp-type HTH domain Thivi_3969 IPR029062 Class I glutamine amidotransferase-like Thivi_3969 IPR017456 CTP synthase, N-terminal Thivi_3969 IPR033828 CTP synthase GATase domain Thivi_3969 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3969 IPR017926 Glutamine amidotransferase Thivi_3969 IPR004468 CTP synthase Thivi_3970 IPR006269 3-deoxy-8-phosphooctulonate synthase Thivi_3970 IPR006218 DAHP synthetase I/KDSA Thivi_3970 IPR013785 Aldolase-type TIM barrel Thivi_3975 IPR020811 Enolase, N-terminal Thivi_3975 IPR029017 Enolase-like, N-terminal Thivi_3975 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_3975 IPR020809 Enolase, conserved site Thivi_3975 IPR000941 Enolase Thivi_3975 IPR020810 Enolase, C-terminal TIM barrel domain Thivi_3976 IPR007060 Septum formation initiator FtsL/DivIC Thivi_3976 IPR023081 Cell division protein FtsB Thivi_3977 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Thivi_3977 IPR034683 Cytidylyltransferase IspD/TarI Thivi_3977 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site Thivi_3977 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3983 IPR002891 Adenylyl-sulfate kinase Thivi_3983 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3984 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thivi_3984 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain Thivi_3984 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thivi_3984 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily Thivi_3984 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension Thivi_3984 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal Thivi_3984 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3984 IPR022878 V-type ATP synthase catalytic alpha chain Thivi_3988 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family Thivi_3989 IPR002699 ATPase, V1 complex, subunit D Thivi_3990 IPR000160 GGDEF domain Thivi_3990 IPR035919 EAL domain superfamily Thivi_3990 IPR001633 EAL domain Thivi_3990 IPR029787 Nucleotide cyclase Thivi_3990 IPR005330 MHYT domain Thivi_3991 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_3991 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3991 IPR019247 Histidine kinase BarA, N-terminal Thivi_3991 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_3991 IPR005467 Histidine kinase domain Thivi_3991 IPR036641 HPT domain superfamily Thivi_3991 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_3991 IPR001789 Signal transduction response regulator, receiver domain Thivi_3991 IPR003660 HAMP domain Thivi_3991 IPR011006 CheY-like superfamily Thivi_3991 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_3991 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3992 IPR011006 CheY-like superfamily Thivi_3992 IPR001789 Signal transduction response regulator, receiver domain Thivi_3992 IPR037522 HD-GYP domain Thivi_3992 IPR003607 HD/PDEase domain Thivi_3993 IPR036909 Cytochrome c-like domain superfamily Thivi_3993 IPR009056 Cytochrome c-like domain Thivi_3994 IPR000659 Pyridoxamine 5'-phosphate oxidase Thivi_3994 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative Thivi_3994 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Thivi_3994 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Thivi_3994 IPR012349 FMN-binding split barrel Thivi_3995 IPR039556 ICL/PEPM domain Thivi_3995 IPR006254 Isocitrate lyase Thivi_3995 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Thivi_3995 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Thivi_3995 IPR040442 Pyruvate kinase-like domain superfamily Thivi_3996 IPR010203 Regulator of ribonuclease activity A Thivi_3996 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Thivi_3996 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Thivi_3997 IPR010452 Isocitrate dehydrogenase kinasephosphatase Thivi_3998 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr Thivi_3998 IPR029056 Ribokinase-like Thivi_3998 IPR004443 YjeF N-terminal domain Thivi_3998 IPR036652 YjeF N-terminal domain superfamily Thivi_3998 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase Thivi_3999 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3999 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Thivi_4000 IPR021731 AMIN domain Thivi_4000 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain Thivi_4000 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_4001 IPR014762 DNA mismatch repair, conserved site Thivi_4001 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms Thivi_4001 IPR020667 DNA mismatch repair protein, MutL Thivi_4001 IPR002099 DNA mismatch repair protein family, N-terminal Thivi_4001 IPR013507 DNA mismatch repair protein, S5 domain 2-like Thivi_4001 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4001 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4001 IPR037198 MutL, C-terminal domain superfamily Thivi_4001 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4001 IPR042120 MutL, C-terminal domain, dimerisation subdomain Thivi_4001 IPR042121 MutL, C-terminal domain, regulatory subdomain Thivi_4001 IPR014790 MutL, C-terminal, dimerisation Thivi_4002 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4002 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thivi_4002 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Thivi_4002 IPR022380 Glutamyl-Q tRNA(Asp) synthetase Thivi_4003 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Thivi_4003 IPR037187 DksA, N-terminal domain superfamily Thivi_4003 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Thivi_4003 IPR000962 Zinc finger, DksA/TraR C4-type Thivi_4003 IPR012784 RNA polymerase-binding transcription factor DksA Thivi_4004 IPR041492 Haloacid dehalogenase-like hydrolase Thivi_4004 IPR036412 HAD-like superfamily Thivi_4004 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_4004 IPR023214 HAD superfamily Thivi_4004 IPR006439 HAD hydrolase, subfamily IA Thivi_4005 IPR004839 Aminotransferase, class I/classII Thivi_4005 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thivi_4005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_4005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_4005 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4008 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4008 IPR030870 Cell division protein ZapE Thivi_4008 IPR005654 ATPase, AFG1-like Thivi_4009 IPR003761 Exonuclease VII, small subunit Thivi_4009 IPR037004 Exonuclease VII, small subunit superfamily Thivi_4010 IPR033749 Polyprenyl synthetase, conserved site Thivi_4010 IPR000092 Polyprenyl synthetase Thivi_4010 IPR008949 Isoprenoid synthase domain superfamily Thivi_4012 IPR000390 Small multidrug resistance protein family Thivi_4013 IPR022838 GTP cyclohydrolase FolE2 Thivi_4013 IPR003801 GTP cyclohydrolase FolE2/MptA Thivi_4017 IPR022985 Sulfate transporter CysZ Thivi_4018 IPR011006 CheY-like superfamily Thivi_4018 IPR003607 HD/PDEase domain Thivi_4018 IPR001789 Signal transduction response regulator, receiver domain Thivi_4018 IPR037522 HD-GYP domain Thivi_4019 IPR003660 HAMP domain Thivi_4019 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4019 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4019 IPR005467 Histidine kinase domain Thivi_4019 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4019 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4019 IPR001789 Signal transduction response regulator, receiver domain Thivi_4019 IPR011006 CheY-like superfamily Thivi_4019 IPR019247 Histidine kinase BarA, N-terminal Thivi_4019 IPR036641 HPT domain superfamily Thivi_4019 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_4019 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4020 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4020 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Thivi_4020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_4020 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Thivi_4020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_4027 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_4027 IPR001296 Glycosyl transferase, family 1 Thivi_4032 IPR001296 Glycosyl transferase, family 1 Thivi_4032 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_4032 IPR017814 Mycothiol biosynthesis protein, MshA Thivi_4038 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4038 IPR017871 ABC transporter, conserved site Thivi_4038 IPR003439 ABC transporter-like Thivi_4038 IPR003593 AAA+ ATPase domain Thivi_4045 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4045 IPR014606 D,D-heptose 7-phosphate kinase Thivi_4045 IPR006204 GHMP kinase N-terminal domain Thivi_4045 IPR036554 GHMP kinase, C-terminal domain superfamily Thivi_4045 IPR013750 GHMP kinase, C-terminal domain Thivi_4045 IPR001174 Galactokinase/homoserine kinase Thivi_4046 IPR035461 GmhA/DiaA Thivi_4046 IPR004515 Phosphoheptose isomerase Thivi_4046 IPR001347 Sugar isomerase (SIS) Thivi_4047 IPR005835 Nucleotidyl transferase domain Thivi_4047 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4049 IPR007739 Rhamnan synthesis F Thivi_4049 IPR032719 Glycosyltransferase WbsX Thivi_4050 IPR001173 Glycosyltransferase 2-like Thivi_4050 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4052 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4052 IPR001173 Glycosyltransferase 2-like Thivi_4057 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4057 IPR001173 Glycosyltransferase 2-like Thivi_4062 IPR001173 Glycosyltransferase 2-like Thivi_4062 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4064 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_4064 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA Thivi_4064 IPR001296 Glycosyl transferase, family 1 Thivi_4065 IPR001296 Glycosyl transferase, family 1 Thivi_4065 IPR017814 Mycothiol biosynthesis protein, MshA Thivi_4065 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Thivi_4069 IPR004881 Ribosome biogenesis GTPase RsgA Thivi_4069 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain Thivi_4069 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4069 IPR010914 RsgA GTPase domain Thivi_4071 IPR036397 Ribonuclease H superfamily Thivi_4071 IPR012337 Ribonuclease H-like superfamily Thivi_4071 IPR022894 Oligoribonuclease Thivi_4071 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_4078 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Thivi_4079 IPR005467 Histidine kinase domain Thivi_4079 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4079 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4079 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4079 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4079 IPR001610 PAC motif Thivi_4079 IPR013767 PAS fold Thivi_4079 IPR000700 PAS-associated, C-terminal Thivi_4079 IPR035965 PAS domain superfamily Thivi_4079 IPR000014 PAS domain Thivi_4079 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4080 IPR017860 Peptidase M22, conserved site Thivi_4080 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Thivi_4080 IPR000905 Gcp-like domain Thivi_4080 IPR017861 Kae1/TsaD family Thivi_4081 IPR018278 Ribosomal protein S21, conserved site Thivi_4081 IPR038380 Ribosomal protein S21 superfamily Thivi_4081 IPR001911 Ribosomal protein S21 Thivi_4082 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 Thivi_4082 IPR019004 Uncharacterised protein YqeY/Aim41 Thivi_4082 IPR042184 YqeY/Aim41, N-terminal domain Thivi_4082 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like Thivi_4083 IPR036977 DNA Primase, CHC2-type zinc finger Thivi_4083 IPR013173 DNA primase DnaG, DnaB-binding domain Thivi_4083 IPR006295 DNA primase, DnaG Thivi_4083 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thivi_4083 IPR002694 Zinc finger, CHC2-type Thivi_4083 IPR030846 DNA primase DnaG, bacteria Thivi_4083 IPR019475 DNA primase, DnaB-helicase binding domain Thivi_4083 IPR006171 TOPRIM domain Thivi_4083 IPR013264 DNA primase, catalytic core, N-terminal Thivi_4083 IPR034151 Bacterial DnaG primase, TOPRIM domain Thivi_4083 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Thivi_4084 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_4084 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Thivi_4084 IPR028630 RNA polymerase sigma factor RpoD Thivi_4084 IPR013325 RNA polymerase sigma factor, region 2 Thivi_4084 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4084 IPR000943 RNA polymerase sigma-70 Thivi_4084 IPR009042 RNA polymerase sigma-70 region 1.2 Thivi_4084 IPR007627 RNA polymerase sigma-70 region 2 Thivi_4084 IPR007630 RNA polymerase sigma-70 region 4 Thivi_4084 IPR007624 RNA polymerase sigma-70 region 3 Thivi_4084 IPR007631 RNA polymerase sigma factor 70, non-essential domain Thivi_4084 IPR007127 RNA polymerase sigma factor 70, region 1.1 Thivi_4084 IPR014284 RNA polymerase sigma-70 like domain Thivi_4084 IPR042189 Sigma-70 factor, region 1.1 superfamily Thivi_4087 IPR036259 MFS transporter superfamily Thivi_4087 IPR020846 Major facilitator superfamily domain Thivi_4087 IPR004751 Drug antiporter protein Thivi_4087 IPR011701 Major facilitator superfamily Thivi_4089 IPR002641 Patatin-like phospholipase domain Thivi_4089 IPR001423 Lysophospholipase patatin, conserved site Thivi_4089 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_4094 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4094 IPR018313 Solute-binding protein family 3, conserved site Thivi_4094 IPR001320 Ionotropic glutamate receptor Thivi_4096 IPR018107 Sodium:dicarboxylate symporter, conserved site Thivi_4096 IPR036458 Sodium:dicarboxylate symporter superfamily Thivi_4096 IPR001991 Sodium:dicarboxylate symporter Thivi_4096 IPR033380 Glutamate-aspartate symport protein GltP/GltT Thivi_4098 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_4098 IPR003742 RNA methyltransferase RlmH Thivi_4098 IPR029028 Alpha/beta knot methyltransferases Thivi_4099 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Thivi_4099 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_4100 IPR003029 S1 domain Thivi_4100 IPR022967 RNA-binding domain, S1 Thivi_4100 IPR004659 Ribonuclease E/G Thivi_4100 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Thivi_4100 IPR012340 Nucleic acid-binding, OB-fold Thivi_4102 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_4102 IPR001110 Uncharacterised protein family UPF0012, conserved site Thivi_4102 IPR003010 Carbon-nitrogen hydrolase Thivi_4103 IPR002510 Metalloprotease TldD/PmbA Thivi_4103 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_4103 IPR036059 Metalloprotease TldD/PmbA superfamily Thivi_4103 IPR025502 TldD Thivi_4104 IPR001650 Helicase, C-terminal Thivi_4104 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4104 IPR006935 Helicase/UvrB, N-terminal Thivi_4104 IPR011332 Zinc-binding ribosomal protein Thivi_4104 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4106 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thivi_4106 IPR007895 MASE1 Thivi_4106 IPR005467 Histidine kinase domain Thivi_4106 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4106 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4107 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_4107 IPR000792 Transcription regulator LuxR, C-terminal Thivi_4107 IPR001789 Signal transduction response regulator, receiver domain Thivi_4107 IPR011006 CheY-like superfamily Thivi_4108 IPR029787 Nucleotide cyclase Thivi_4108 IPR000014 PAS domain Thivi_4108 IPR000700 PAS-associated, C-terminal Thivi_4108 IPR035965 PAS domain superfamily Thivi_4108 IPR013656 PAS fold-4 Thivi_4108 IPR000160 GGDEF domain Thivi_4110 IPR000792 Transcription regulator LuxR, C-terminal Thivi_4110 IPR011006 CheY-like superfamily Thivi_4110 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_4110 IPR001789 Signal transduction response regulator, receiver domain Thivi_4111 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_4111 IPR029151 Periplasmic sensor-like domain superfamily Thivi_4111 IPR003660 HAMP domain Thivi_4111 IPR033479 Double Cache domain 1 Thivi_4112 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4112 IPR011006 CheY-like superfamily Thivi_4112 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_4112 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Thivi_4112 IPR001789 Signal transduction response regulator, receiver domain Thivi_4112 IPR039420 Transcriptional regulatory protein WalR-like Thivi_4112 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_4114 IPR002545 CheW-like domain Thivi_4114 IPR036061 CheW-like domain superfamily Thivi_4114 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily Thivi_4114 IPR004105 Histidine kinase CheA-like, homodimeric domain Thivi_4114 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_4114 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4114 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4114 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4114 IPR005467 Histidine kinase domain Thivi_4114 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4114 IPR036641 HPT domain superfamily Thivi_4116 IPR002545 CheW-like domain Thivi_4116 IPR036061 CheW-like domain superfamily Thivi_4116 IPR039315 Chemotaxis protein CheW Thivi_4117 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_4117 IPR033480 Single Cache domain 2 Thivi_4117 IPR003660 HAMP domain Thivi_4117 IPR033480 Single Cache domain 2 Thivi_4117 IPR004090 Chemotaxis methyl-accepting receptor Thivi_4117 IPR003660 HAMP domain Thivi_4117 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain Thivi_4117 IPR004090 Chemotaxis methyl-accepting receptor Thivi_4118 IPR039315 Chemotaxis protein CheW Thivi_4118 IPR002545 CheW-like domain Thivi_4118 IPR036061 CheW-like domain superfamily Thivi_4119 IPR000780 MCP methyltransferase, CheR-type Thivi_4119 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_4119 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_4119 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_4119 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_4119 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4120 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_4120 IPR038592 CheD-like superfamily Thivi_4120 IPR005659 Chemoreceptor glutamine deamidase CheD Thivi_4121 IPR011006 CheY-like superfamily Thivi_4121 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thivi_4121 IPR001789 Signal transduction response regulator, receiver domain Thivi_4121 IPR035909 Methylesterase CheB, C-terminal Thivi_4121 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type Thivi_4122 IPR000160 GGDEF domain Thivi_4122 IPR005330 MHYT domain Thivi_4122 IPR029787 Nucleotide cyclase Thivi_4122 IPR035919 EAL domain superfamily Thivi_4122 IPR000014 PAS domain Thivi_4122 IPR001633 EAL domain Thivi_4122 IPR035965 PAS domain superfamily Thivi_4124 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_4124 IPR036059 Metalloprotease TldD/PmbA superfamily Thivi_4124 IPR002510 Metalloprotease TldD/PmbA Thivi_4127 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4127 IPR003333 Mycolic acid cyclopropane synthase Thivi_4128 IPR010977 Aromatic-L-amino-acid decarboxylase Thivi_4128 IPR002129 Pyridoxal phosphate-dependent decarboxylase Thivi_4128 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4128 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_4128 IPR021115 Pyridoxal-phosphate binding site Thivi_4133 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4133 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_4133 IPR002941 DNA methylase N-4/N-6 Thivi_4133 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Thivi_4133 IPR041405 Type III R-M EcoP15I, C-terminal Thivi_4139 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_4139 IPR002510 Metalloprotease TldD/PmbA Thivi_4139 IPR025502 TldD Thivi_4139 IPR036059 Metalloprotease TldD/PmbA superfamily Thivi_4144 IPR028343 Fructose-1,6-bisphosphatase Thivi_4144 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal Thivi_4144 IPR000146 Fructose-1,6-bisphosphatase class 1 Thivi_4146 IPR035965 PAS domain superfamily Thivi_4146 IPR035919 EAL domain superfamily Thivi_4146 IPR029787 Nucleotide cyclase Thivi_4146 IPR005330 MHYT domain Thivi_4146 IPR000160 GGDEF domain Thivi_4146 IPR001633 EAL domain Thivi_4147 IPR013976 Metal-dependent hydrolase HDOD Thivi_4149 IPR028923 SAICAR synthetase/ADE2, N-terminal Thivi_4149 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Thivi_4149 IPR018236 SAICAR synthetase, conserved site Thivi_4151 IPR006175 YjgF/YER057c/UK114 family Thivi_4151 IPR019897 RidA, conserved site Thivi_4151 IPR006056 RidA family Thivi_4151 IPR035959 RutC-like superfamily Thivi_4152 IPR031304 Transglycosylase SLT domain 2 Thivi_4152 IPR011757 Lytic transglycosylase MltB Thivi_4152 IPR023346 Lysozyme-like domain superfamily Thivi_4153 IPR035917 YjbQ-like superfamily Thivi_4153 IPR001602 Uncharacterised protein family UPF0047 Thivi_4154 IPR004609 ATP-dependent DNA helicase RecG Thivi_4154 IPR012340 Nucleic acid-binding, OB-fold Thivi_4154 IPR001650 Helicase, C-terminal Thivi_4154 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4154 IPR033454 RecG, wedge domain Thivi_4154 IPR011545 DEAD/DEAH box helicase domain Thivi_4154 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4155 IPR000537 UbiA prenyltransferase family Thivi_4155 IPR030470 UbiA prenyltransferase conserved site Thivi_4155 IPR006370 4-hydroxybenzoate polyprenyltransferase-like Thivi_4155 IPR039653 Prenyltransferase Thivi_4156 IPR001853 DSBA-like thioredoxin domain Thivi_4156 IPR017937 Thioredoxin, conserved site Thivi_4156 IPR036249 Thioredoxin-like superfamily Thivi_4156 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Thivi_4156 IPR013766 Thioredoxin domain Thivi_4163 IPR003607 HD/PDEase domain Thivi_4163 IPR011006 CheY-like superfamily Thivi_4163 IPR037522 HD-GYP domain Thivi_4163 IPR001789 Signal transduction response regulator, receiver domain Thivi_4164 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4164 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4164 IPR019247 Histidine kinase BarA, N-terminal Thivi_4164 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4164 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_4164 IPR001789 Signal transduction response regulator, receiver domain Thivi_4164 IPR005467 Histidine kinase domain Thivi_4164 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4164 IPR036641 HPT domain superfamily Thivi_4164 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4164 IPR011006 CheY-like superfamily Thivi_4164 IPR003660 HAMP domain Thivi_4165 IPR035985 Ubiquitin-activating enzyme Thivi_4165 IPR000594 THIF-type NAD/FAD binding fold Thivi_4165 IPR012730 Molybdopterin synthase sulfurylase MoeB Thivi_4172 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4172 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Thivi_4172 IPR040758 Release factor glutamine methyltransferase, N-terminal domain Thivi_4172 IPR004556 Methyltransferase HemK-like Thivi_4172 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_4172 IPR007848 Methyltransferase small domain Thivi_4173 IPR005139 Peptide chain release factor Thivi_4173 IPR000352 Peptide chain release factor class I Thivi_4173 IPR004373 Peptide chain release factor 1 Thivi_4174 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily Thivi_4174 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain Thivi_4174 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Thivi_4174 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thivi_4174 IPR018214 Glutamyl-tRNA reductase, conserved site Thivi_4174 IPR036291 NAD(P)-binding domain superfamily Thivi_4174 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Thivi_4174 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily Thivi_4175 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_4175 IPR013026 Tetratricopeptide repeat-containing domain Thivi_4175 IPR019734 Tetratricopeptide repeat Thivi_4176 IPR013750 GHMP kinase, C-terminal domain Thivi_4176 IPR036554 GHMP kinase, C-terminal domain superfamily Thivi_4176 IPR006204 GHMP kinase N-terminal domain Thivi_4176 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4176 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4176 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Thivi_4178 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site Thivi_4178 IPR005946 Ribose-phosphate pyrophosphokinase Thivi_4178 IPR029057 Phosphoribosyltransferase-like Thivi_4178 IPR000836 Phosphoribosyltransferase domain Thivi_4178 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Thivi_4178 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type Thivi_4179 IPR001021 Ribosomal protein L25, long-form Thivi_4179 IPR029751 Ribosomal protein L25 Thivi_4179 IPR037121 Ribosomal protein L25, C-terminal Thivi_4179 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Thivi_4179 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily Thivi_4179 IPR020055 Ribosomal protein L25, short-form Thivi_4179 IPR020057 Ribosomal protein L25, beta domain Thivi_4180 IPR036416 Peptidyl-tRNA hydrolase superfamily Thivi_4180 IPR018171 Peptidyl-tRNA hydrolase, conserved site Thivi_4180 IPR001328 Peptidyl-tRNA hydrolase Thivi_4182 IPR036291 NAD(P)-binding domain superfamily Thivi_4182 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Thivi_4182 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Thivi_4182 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Thivi_4182 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Thivi_4182 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Thivi_4182 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Thivi_4182 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_4186 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Thivi_4186 IPR000795 Transcription factor, GTP-binding domain Thivi_4186 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_4186 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Thivi_4186 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thivi_4186 IPR005225 Small GTP-binding protein domain Thivi_4186 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thivi_4186 IPR033720 Elongation factor Tu, domain 2 Thivi_4186 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4186 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4186 IPR031157 Tr-type G domain, conserved site Thivi_4188 IPR005807 SecE subunit of protein translocation complex, bacterial-like Thivi_4188 IPR038379 SecE superfamily Thivi_4188 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit Thivi_4189 IPR005824 KOW Thivi_4189 IPR014722 Ribosomal protein L2, domain 2 Thivi_4189 IPR036735 NusG, N-terminal domain superfamily Thivi_4189 IPR006645 NusG, N-terminal Thivi_4189 IPR008991 Translation protein SH3-like domain superfamily Thivi_4189 IPR001062 Transcription antitermination protein, NusG Thivi_4189 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Thivi_4190 IPR006519 Ribosomal protein L11, bacterial-type Thivi_4190 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Thivi_4190 IPR000911 Ribosomal protein L11/L12 Thivi_4190 IPR020785 Ribosomal protein L11, conserved site Thivi_4190 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Thivi_4190 IPR020784 Ribosomal protein L11, N-terminal Thivi_4190 IPR020783 Ribosomal protein L11, C-terminal Thivi_4191 IPR002143 Ribosomal protein L1 Thivi_4191 IPR023673 Ribosomal protein L1, conserved site Thivi_4191 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Thivi_4191 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Thivi_4191 IPR023674 Ribosomal protein L1-like Thivi_4191 IPR005878 Ribosomal protein L1, bacterial-type Thivi_4192 IPR022973 Ribosomal protein L10 Thivi_4192 IPR002363 Ribosomal protein L10, eubacterial, conserved site Thivi_4192 IPR001790 Ribosomal protein L10P Thivi_4193 IPR000206 Ribosomal protein L7/L12 Thivi_4193 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily Thivi_4193 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4193 IPR013823 Ribosomal protein L7/L12, C-terminal Thivi_4193 IPR008932 Ribosomal protein L7/L12, oligomerisation Thivi_4194 IPR007121 RNA polymerase, beta subunit, conserved site Thivi_4194 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type Thivi_4194 IPR037034 RNA polymerase Rpb2, domain 2 superfamily Thivi_4194 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain Thivi_4194 IPR015712 DNA-directed RNA polymerase, subunit 2 Thivi_4194 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Thivi_4194 IPR007641 RNA polymerase Rpb2, domain 7 Thivi_4194 IPR007645 RNA polymerase Rpb2, domain 3 Thivi_4194 IPR007644 RNA polymerase, beta subunit, protrusion Thivi_4194 IPR007642 RNA polymerase Rpb2, domain 2 Thivi_4194 IPR014724 RNA polymerase Rpb2, OB-fold Thivi_4194 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily Thivi_4195 IPR042102 RNA polymerase Rpb1, domain 3 superfamily Thivi_4195 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Thivi_4195 IPR038120 RNA polymerase Rpb1, funnel domain superfamily Thivi_4195 IPR007081 RNA polymerase Rpb1, domain 5 Thivi_4195 IPR007083 RNA polymerase Rpb1, domain 4 Thivi_4195 IPR007066 RNA polymerase Rpb1, domain 3 Thivi_4195 IPR000722 RNA polymerase, alpha subunit Thivi_4195 IPR007080 RNA polymerase Rpb1, domain 1 Thivi_4195 IPR006592 RNA polymerase, N-terminal Thivi_4196 IPR006032 Ribosomal protein S12/S23 Thivi_4196 IPR005679 Ribosomal protein S12, bacterial-type Thivi_4196 IPR012340 Nucleic acid-binding, OB-fold Thivi_4197 IPR000235 Ribosomal protein S5/S7 Thivi_4197 IPR005717 Ribosomal protein S7, bacterial/organellar-type Thivi_4197 IPR020606 Ribosomal protein S7, conserved site Thivi_4197 IPR023798 Ribosomal protein S7 domain Thivi_4197 IPR036823 Ribosomal protein S7 domain superfamily Thivi_4198 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4198 IPR031157 Tr-type G domain, conserved site Thivi_4198 IPR009022 Elongation factor G, domain III Thivi_4198 IPR035647 EF-G domain III/V-like Thivi_4198 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4198 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_4198 IPR005517 Translation elongation factor EFG/EF2, domain IV Thivi_4198 IPR035649 EFG, domain V Thivi_4198 IPR005225 Small GTP-binding protein domain Thivi_4198 IPR000795 Transcription factor, GTP-binding domain Thivi_4198 IPR000640 Elongation factor EFG, domain V-like Thivi_4198 IPR041095 Elongation Factor G, domain II Thivi_4198 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4198 IPR004540 Translation elongation factor EFG/EF2 Thivi_4198 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4199 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Thivi_4199 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thivi_4199 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thivi_4199 IPR004161 Translation elongation factor EFTu-like, domain 2 Thivi_4199 IPR000795 Transcription factor, GTP-binding domain Thivi_4199 IPR033720 Elongation factor Tu, domain 2 Thivi_4199 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4199 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4199 IPR005225 Small GTP-binding protein domain Thivi_4199 IPR031157 Tr-type G domain, conserved site Thivi_4199 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain Thivi_4200 IPR001848 Ribosomal protein S10 Thivi_4200 IPR036838 Ribosomal protein S10 domain superfamily Thivi_4200 IPR027486 Ribosomal protein S10 domain Thivi_4201 IPR000597 Ribosomal protein L3 Thivi_4201 IPR019927 Ribosomal protein L3, bacterial/organelle-type Thivi_4201 IPR019926 Ribosomal protein L3, conserved site Thivi_4201 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4203 IPR013025 Ribosomal protein L25/L23 Thivi_4203 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_4203 IPR012678 Ribosomal protein L23/L15e core domain superfamily Thivi_4204 IPR008991 Translation protein SH3-like domain superfamily Thivi_4204 IPR014726 Ribosomal protein L2, domain 3 Thivi_4204 IPR012340 Nucleic acid-binding, OB-fold Thivi_4204 IPR022666 Ribosomal Proteins L2, RNA binding domain Thivi_4204 IPR014722 Ribosomal protein L2, domain 2 Thivi_4204 IPR002171 Ribosomal protein L2 Thivi_4204 IPR005880 Ribosomal protein L2, bacterial/organellar-type Thivi_4204 IPR022669 Ribosomal protein L2, C-terminal Thivi_4204 IPR022671 Ribosomal protein L2, conserved site Thivi_4205 IPR002222 Ribosomal protein S19/S15 Thivi_4205 IPR005732 Ribosomal protein S19, bacterial-type Thivi_4205 IPR020934 Ribosomal protein S19 conserved site Thivi_4205 IPR023575 Ribosomal protein S19, superfamily Thivi_4206 IPR001063 Ribosomal protein L22/L17 Thivi_4206 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Thivi_4206 IPR036394 Ribosomal protein L22/L17 superfamily Thivi_4206 IPR018260 Ribosomal protein L22/L17, conserved site Thivi_4207 IPR036419 Ribosomal protein S3, C-terminal domain superfamily Thivi_4207 IPR018280 Ribosomal protein S3, conserved site Thivi_4207 IPR004087 K Homology domain Thivi_4207 IPR001351 Ribosomal protein S3, C-terminal Thivi_4207 IPR004044 K Homology domain, type 2 Thivi_4207 IPR009019 K homology domain superfamily, prokaryotic type Thivi_4207 IPR005704 Ribosomal protein S3, bacterial-type Thivi_4207 IPR015946 K homology domain-like, alpha/beta Thivi_4208 IPR036920 Ribosomal protein L10e/L16 superfamily Thivi_4208 IPR016180 Ribosomal protein L10e/L16 Thivi_4208 IPR020798 Ribosomal protein L16, conserved site Thivi_4208 IPR000114 Ribosomal protein L16 Thivi_4209 IPR001854 Ribosomal protein L29/L35 Thivi_4209 IPR036049 Ribosomal protein L29/L35 superfamily Thivi_4210 IPR012340 Nucleic acid-binding, OB-fold Thivi_4210 IPR019984 30S ribosomal protein S17 Thivi_4210 IPR000266 Ribosomal protein S17/S11 Thivi_4210 IPR019979 Ribosomal protein S17, conserved site Thivi_4211 IPR019972 Ribosomal protein L14P, conserved site Thivi_4211 IPR005745 Ribosomal protein L14P, bacterial-type Thivi_4211 IPR000218 Ribosomal protein L14P Thivi_4211 IPR036853 Ribosomal protein L14 superfamily Thivi_4212 IPR008991 Translation protein SH3-like domain superfamily Thivi_4212 IPR003256 Ribosomal protein L24 Thivi_4212 IPR014722 Ribosomal protein L2, domain 2 Thivi_4212 IPR041988 Ribosomal Protein L26/L24, KOW domain Thivi_4212 IPR005824 KOW Thivi_4213 IPR022803 Ribosomal protein L5 domain superfamily Thivi_4213 IPR002132 Ribosomal protein L5 Thivi_4213 IPR031310 Ribosomal protein L5, N-terminal Thivi_4213 IPR031309 Ribosomal protein L5, C-terminal Thivi_4213 IPR020930 Ribosomal protein L5, bacterial-type Thivi_4214 IPR018271 Ribosomal protein S14, conserved site Thivi_4214 IPR023036 Ribosomal protein S14, bacterial/plastid Thivi_4214 IPR001209 Ribosomal protein S14 Thivi_4215 IPR000630 Ribosomal protein S8 Thivi_4215 IPR035987 Ribosomal protein S8 superfamily Thivi_4216 IPR002358 Ribosomal protein L6, conserved site Thivi_4216 IPR019906 Ribosomal protein L6, bacterial-type Thivi_4216 IPR000702 Ribosomal protein L6 Thivi_4216 IPR020040 Ribosomal protein L6, alpha-beta domain Thivi_4216 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily Thivi_4217 IPR004389 Ribosomal protein L18, bacterial-type Thivi_4217 IPR005484 Ribosomal protein L18 Thivi_4218 IPR018192 Ribosomal protein S5, N-terminal, conserved site Thivi_4218 IPR000851 Ribosomal protein S5 Thivi_4218 IPR005712 Ribosomal protein S5, bacterial-type Thivi_4218 IPR005324 Ribosomal protein S5, C-terminal Thivi_4218 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4218 IPR013810 Ribosomal protein S5, N-terminal Thivi_4218 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4219 IPR005996 Ribosomal protein L30, bacterial-type Thivi_4219 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Thivi_4219 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Thivi_4220 IPR030878 Ribosomal protein L15 Thivi_4220 IPR036227 Ribosomal L18e/L15P superfamily Thivi_4220 IPR021131 Ribosomal protein L18e/L15P Thivi_4220 IPR001196 Ribosomal protein L15, conserved site Thivi_4220 IPR005749 Ribosomal protein L15, bacterial-type Thivi_4221 IPR030659 SecY conserved site Thivi_4221 IPR023201 SecY domain superfamily Thivi_4221 IPR002208 SecY/SEC61-alpha family Thivi_4221 IPR026593 Protein translocase subunit SecY Thivi_4222 IPR000473 Ribosomal protein L36 Thivi_4222 IPR035977 Ribosomal protein L36 superfamily Thivi_4223 IPR019980 Ribosomal protein S13, bacterial-type Thivi_4223 IPR001892 Ribosomal protein S13 Thivi_4223 IPR027437 30s ribosomal protein S13, C-terminal Thivi_4223 IPR010979 Ribosomal protein S13-like, H2TH Thivi_4223 IPR018269 Ribosomal protein S13, conserved site Thivi_4224 IPR036967 Ribosomal protein S11 superfamily Thivi_4224 IPR001971 Ribosomal protein S11 Thivi_4224 IPR019981 Ribosomal protein S11, bacterial-type Thivi_4224 IPR018102 Ribosomal S11, conserved site Thivi_4225 IPR001912 Ribosomal protein S4/S9, N-terminal Thivi_4225 IPR005709 Ribosomal protein S4, bacterial-type Thivi_4225 IPR018079 Ribosomal protein S4, conserved site Thivi_4225 IPR002942 RNA-binding S4 domain Thivi_4225 IPR036986 RNA-binding S4 domain superfamily Thivi_4225 IPR022801 Ribosomal protein S4/S9 Thivi_4226 IPR036643 DNA-directed RNA polymerase, insert domain superfamily Thivi_4226 IPR011260 RNA polymerase, alpha subunit, C-terminal Thivi_4226 IPR011262 DNA-directed RNA polymerase, insert domain Thivi_4226 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Thivi_4226 IPR011773 DNA-directed RNA polymerase, alpha subunit Thivi_4226 IPR036603 RNA polymerase, RBP11-like subunit Thivi_4227 IPR000456 Ribosomal protein L17 Thivi_4227 IPR036373 Ribosomal protein L17 superfamily Thivi_4230 IPR038476 UvrC homology region 2 superfamily Thivi_4230 IPR001162 UvrC family homology region Thivi_4230 IPR000305 GIY-YIG endonuclease Thivi_4230 IPR001943 UVR domain Thivi_4230 IPR035901 GIY-YIG endonuclease superfamily Thivi_4230 IPR010994 RuvA domain 2-like Thivi_4230 IPR036876 UVR domain superfamily Thivi_4230 IPR004791 UvrABC system, subunit C Thivi_4230 IPR041663 DisA/LigA, helix-hairpin-helix motif Thivi_4232 IPR002646 Poly A polymerase, head domain Thivi_4232 IPR006674 HD domain Thivi_4232 IPR012006 tRNA nucleotidyltransferase, proteobacteria Thivi_4232 IPR003607 HD/PDEase domain Thivi_4232 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Thivi_4233 IPR029787 Nucleotide cyclase Thivi_4233 IPR001633 EAL domain Thivi_4233 IPR005330 MHYT domain Thivi_4233 IPR000160 GGDEF domain Thivi_4233 IPR035919 EAL domain superfamily Thivi_4235 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4235 IPR002035 von Willebrand factor, type A Thivi_4237 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4237 IPR011704 ATPase, dynein-related, AAA domain Thivi_4237 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_4238 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thivi_4238 IPR033966 RuBisCO Thivi_4238 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thivi_4238 IPR036422 RuBisCO large subunit, N-terminal domain superfamily Thivi_4238 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II Thivi_4238 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site Thivi_4238 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily Thivi_4239 IPR002299 Porin, Neisseria sp. type Thivi_4239 IPR001702 Porin, Gram-negative type Thivi_4239 IPR023614 Porin domain superfamily Thivi_4239 IPR033900 Porin domain, Gram-negative type Thivi_4240 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup Thivi_4240 IPR004788 Ribose 5-phosphate isomerase, type A Thivi_4240 IPR037171 NagB/RpiA transferase-like Thivi_4241 IPR024717 Denitrification system component NapC/NirT/NrfH Thivi_4241 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT Thivi_4241 IPR038266 NapC/NirT cytochrome c superfamily Thivi_4241 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_4241 IPR036280 Multiheme cytochrome superfamily Thivi_4241 IPR011031 Multihaem cytochrome Thivi_4242 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Thivi_4242 IPR036280 Multiheme cytochrome superfamily Thivi_4242 IPR011031 Multihaem cytochrome Thivi_4243 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4243 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4243 IPR011886 Ferredoxin-type protein, NapH/MauN family Thivi_4244 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4244 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_4244 IPR004494 MauM/NapG ferredoxin-type protein Thivi_4244 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4245 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_4245 IPR010051 Periplasmic nitrate reductase, large subunit Thivi_4245 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_4245 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_4245 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site Thivi_4245 IPR006657 Molybdopterin dinucleotide-binding domain Thivi_4245 IPR006656 Molybdopterin oxidoreductase Thivi_4245 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_4245 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain Thivi_4248 IPR003660 HAMP domain Thivi_4248 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4248 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4248 IPR005467 Histidine kinase domain Thivi_4248 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing Thivi_4248 IPR029095 NarX-like, N-terminal Thivi_4248 IPR042295 NarX-like, N-terminal domain superfamily Thivi_4248 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thivi_4249 IPR000792 Transcription regulator LuxR, C-terminal Thivi_4249 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4249 IPR011006 CheY-like superfamily Thivi_4249 IPR016032 Signal transduction response regulator, C-terminal effector Thivi_4249 IPR001789 Signal transduction response regulator, receiver domain Thivi_4250 IPR001962 Asparagine synthase Thivi_4250 IPR017932 Glutamine amidotransferase type 2 domain Thivi_4250 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_4250 IPR033738 Asparagine synthase, N-terminal domain Thivi_4250 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thivi_4254 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thivi_4254 IPR002509 NodB homology domain Thivi_4254 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA Thivi_4256 IPR005702 Exopolysaccharide synthesis protein Thivi_4256 IPR025669 AAA domain Thivi_4256 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4258 IPR003715 Polysaccharide export protein Thivi_4259 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_4259 IPR001789 Signal transduction response regulator, receiver domain Thivi_4259 IPR025944 Sigma-54 interaction domain, conserved site Thivi_4259 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_4259 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_4259 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4259 IPR002197 DNA binding HTH domain, Fis-type Thivi_4259 IPR009057 Homeobox-like domain superfamily Thivi_4259 IPR011006 CheY-like superfamily Thivi_4259 IPR003593 AAA+ ATPase domain Thivi_4260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4260 IPR005467 Histidine kinase domain Thivi_4260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4260 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4261 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4261 IPR003593 AAA+ ATPase domain Thivi_4261 IPR036365 PGBD-like superfamily Thivi_4261 IPR036366 PGBD superfamily Thivi_4261 IPR002477 Peptidoglycan binding-like Thivi_4271 IPR032806 H repeat-associated protein, N-terminal Thivi_4271 IPR002559 Transposase, IS4-like Thivi_4273 IPR035985 Ubiquitin-activating enzyme Thivi_4273 IPR000594 THIF-type NAD/FAD binding fold Thivi_4273 IPR032701 Prokaryotic E2 family B Thivi_4276 IPR011782 Peptidase S1C, Do Thivi_4276 IPR036034 PDZ superfamily Thivi_4276 IPR001478 PDZ domain Thivi_4276 IPR001940 Peptidase S1C Thivi_4276 IPR009003 Peptidase S1, PA clan Thivi_4277 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_4277 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_4277 IPR029016 GAF-like domain superfamily Thivi_4277 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_4277 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4277 IPR010113 Nif-specific regulatory protein Thivi_4277 IPR009057 Homeobox-like domain superfamily Thivi_4277 IPR002197 DNA binding HTH domain, Fis-type Thivi_4277 IPR003018 GAF domain Thivi_4277 IPR003593 AAA+ ATPase domain Thivi_4277 IPR025944 Sigma-54 interaction domain, conserved site Thivi_4279 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Thivi_4279 IPR003362 Bacterial sugar transferase Thivi_4283 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Thivi_4283 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Thivi_4283 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Thivi_4283 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Thivi_4283 IPR036291 NAD(P)-binding domain superfamily Thivi_4283 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Thivi_4283 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Thivi_4283 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_4284 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Thivi_4284 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like Thivi_4287 IPR000891 Pyruvate carboxyltransferase Thivi_4287 IPR013477 Homocitrate synthase NifV-like Thivi_4287 IPR013785 Aldolase-type TIM barrel Thivi_4287 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thivi_4288 IPR011990 Tetratricopeptide-like helical domain superfamily Thivi_4292 IPR004893 Nitrogen fixation protein NifW Thivi_4293 IPR007415 Nitrogenase MoFe maturation protein, NifZ Thivi_4294 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thivi_4294 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thivi_4294 IPR027304 Trigger factor/SurA domain superfamily Thivi_4294 IPR014282 Nitrogen fixation protein NifM Thivi_4295 IPR004487 Clp protease, ATP-binding subunit ClpX Thivi_4295 IPR010603 Zinc finger, ClpX C4-type Thivi_4295 IPR003593 AAA+ ATPase domain Thivi_4295 IPR038366 Zinc finger, ClpX C4-type superfamily Thivi_4295 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4295 IPR019489 Clp ATPase, C-terminal Thivi_4295 IPR003959 ATPase, AAA-type, core Thivi_4296 IPR002942 RNA-binding S4 domain Thivi_4296 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Thivi_4296 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Thivi_4296 IPR020103 Pseudouridine synthase, catalytic domain superfamily Thivi_4296 IPR036986 RNA-binding S4 domain superfamily Thivi_4296 IPR006145 Pseudouridine synthase, RsuA/RluA Thivi_4298 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Thivi_4298 IPR032423 AAA C-terminal domain Thivi_4298 IPR003959 ATPase, AAA-type, core Thivi_4298 IPR021886 MgsA AAA+ ATPase C-terminal Thivi_4298 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4298 IPR003593 AAA+ ATPase domain Thivi_4299 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Thivi_4299 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria Thivi_4299 IPR029046 Lipoprotein localisation LolA/LolB/LppX Thivi_4301 IPR041027 FtsK alpha domain Thivi_4301 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4301 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4301 IPR018541 FtsK gamma domain Thivi_4301 IPR002543 FtsK domain Thivi_4301 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4301 IPR025199 DNA translocase FtsK, 4TM region Thivi_4301 IPR003593 AAA+ ATPase domain Thivi_4302 IPR025199 DNA translocase FtsK, 4TM region Thivi_4302 IPR041027 FtsK alpha domain Thivi_4302 IPR002543 FtsK domain Thivi_4302 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4302 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4302 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4302 IPR018541 FtsK gamma domain Thivi_4303 IPR035965 PAS domain superfamily Thivi_4303 IPR031967 PhoR, single Cache-like domain Thivi_4303 IPR013767 PAS fold Thivi_4303 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4303 IPR000014 PAS domain Thivi_4303 IPR005467 Histidine kinase domain Thivi_4303 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4303 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4303 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4303 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4304 IPR011006 CheY-like superfamily Thivi_4304 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4304 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4304 IPR005467 Histidine kinase domain Thivi_4304 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4304 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4304 IPR019247 Histidine kinase BarA, N-terminal Thivi_4304 IPR036641 HPT domain superfamily Thivi_4304 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4304 IPR003660 HAMP domain Thivi_4304 IPR001789 Signal transduction response regulator, receiver domain Thivi_4304 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thivi_4305 IPR012340 Nucleic acid-binding, OB-fold Thivi_4305 IPR002059 Cold-shock protein, DNA-binding Thivi_4305 IPR019844 Cold-shock (CSD) domain Thivi_4305 IPR011129 Cold shock domain Thivi_4305 IPR012156 Cold shock, CspA Thivi_4306 IPR000905 Gcp-like domain Thivi_4306 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB Thivi_4308 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thivi_4308 IPR011611 Carbohydrate kinase PfkB Thivi_4308 IPR029056 Ribokinase-like Thivi_4311 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_4311 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC Thivi_4311 IPR003439 ABC transporter-like Thivi_4311 IPR011527 ABC transporter type 1, transmembrane domain Thivi_4311 IPR017871 ABC transporter, conserved site Thivi_4311 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4311 IPR003593 AAA+ ATPase domain Thivi_4312 IPR011527 ABC transporter type 1, transmembrane domain Thivi_4312 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_4312 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4312 IPR003439 ABC transporter-like Thivi_4312 IPR017871 ABC transporter, conserved site Thivi_4312 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD Thivi_4312 IPR003593 AAA+ ATPase domain Thivi_4312 IPR039421 Type I protein exporter Thivi_4313 IPR008538 Domain of unknown function DUF820 Thivi_4313 IPR011335 Restriction endonuclease type II-like Thivi_4316 IPR008863 Toxic anion resistance Thivi_4317 IPR000307 Ribosomal protein S16 Thivi_4317 IPR020592 Ribosomal protein S16, conserved site Thivi_4317 IPR023803 Ribosomal protein S16 domain superfamily Thivi_4318 IPR036976 RimM, N-terminal domain superfamily Thivi_4318 IPR011033 PRC-barrel-like superfamily Thivi_4318 IPR002676 RimM, N-terminal Thivi_4318 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4318 IPR011961 16S rRNA processing protein RimM Thivi_4318 IPR027275 PRC-barrel domain Thivi_4319 IPR029028 Alpha/beta knot methyltransferases Thivi_4319 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Thivi_4319 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_4319 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Thivi_4319 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Thivi_4320 IPR008991 Translation protein SH3-like domain superfamily Thivi_4320 IPR001857 Ribosomal protein L19 Thivi_4320 IPR018257 Ribosomal protein L19, conserved site Thivi_4320 IPR038657 Ribosomal protein L19 superfamily Thivi_4321 IPR036397 Ribonuclease H superfamily Thivi_4321 IPR023607 Exodeoxyribonuclease I Thivi_4321 IPR034748 Exonuclease I, C-terminal alpha-helical domain Thivi_4321 IPR034747 Exonuclease I, SH3-like domain Thivi_4321 IPR038649 Exonuclease I, SH3-like domain superfamily Thivi_4321 IPR013620 Exodeoxyribonuclease I, C-terminal Thivi_4321 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_4321 IPR012337 Ribonuclease H-like superfamily Thivi_4322 IPR036413 YaeB-like superfamily Thivi_4322 IPR040372 YaeB-like Thivi_4322 IPR041369 TrmO, C-terminal Thivi_4322 IPR023368 Uncharacterised protein family UPF0066, conserved site Thivi_4322 IPR023370 TrmO-like, N-terminal domain Thivi_4322 IPR036414 YaeB, N-terminal domain superfamily Thivi_4323 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4323 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Thivi_4323 IPR030390 RNA methyltransferase TrmA, active site Thivi_4323 IPR012340 Nucleic acid-binding, OB-fold Thivi_4323 IPR002792 TRAM domain Thivi_4323 IPR030391 RNA methyltransferase TrmA, conserved site Thivi_4323 IPR010280 (Uracil-5)-methyltransferase family Thivi_4326 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4326 IPR018392 LysM domain Thivi_4326 IPR005490 L,D-transpeptidase catalytic domain Thivi_4326 IPR036779 LysM domain superfamily Thivi_4327 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4327 IPR005835 Nucleotidyl transferase domain Thivi_4327 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Thivi_4327 IPR005836 ADP-glucose pyrophosphorylase, conserved site Thivi_4327 IPR011004 Trimeric LpxA-like superfamily Thivi_4328 IPR011258 BPG-independent PGAM, N-terminal Thivi_4328 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily Thivi_4328 IPR006124 Metalloenzyme Thivi_4328 IPR017850 Alkaline-phosphatase-like, core domain superfamily Thivi_4328 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Thivi_4329 IPR000398 Thymidylate synthase Thivi_4329 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily Thivi_4329 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain Thivi_4332 IPR006638 Elp3/MiaB/NifB Thivi_4332 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4332 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_4332 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_4332 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Thivi_4332 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA Thivi_4332 IPR005814 Aminotransferase class-III Thivi_4332 IPR007197 Radical SAM Thivi_4332 IPR013785 Aldolase-type TIM barrel Thivi_4332 IPR010722 Biotin and thiamin synthesis-associated domain Thivi_4335 IPR011006 CheY-like superfamily Thivi_4335 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_4335 IPR001789 Signal transduction response regulator, receiver domain Thivi_4335 IPR039420 Transcriptional regulatory protein WalR-like Thivi_4335 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4336 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4336 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4336 IPR005467 Histidine kinase domain Thivi_4336 IPR003660 HAMP domain Thivi_4336 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4336 IPR038429 PhoQ Sensor superfamily Thivi_4336 IPR015014 PhoQ Sensor Thivi_4336 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4337 IPR041405 Type III R-M EcoP15I, C-terminal Thivi_4337 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4337 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thivi_4337 IPR002941 DNA methylase N-4/N-6 Thivi_4337 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Thivi_4341 IPR007337 RelB antitoxin/Antitoxin DinJ Thivi_4341 IPR013321 Arc-type ribbon-helix-helix Thivi_4342 IPR006935 Helicase/UvrB, N-terminal Thivi_4342 IPR014883 VRR-NUC domain Thivi_4342 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4343 IPR005886 UDP-glucose 4-epimerase Thivi_4343 IPR036291 NAD(P)-binding domain superfamily Thivi_4343 IPR016040 NAD(P)-binding domain Thivi_4345 IPR005631 Flavinator of succinate dehydrogenase Thivi_4345 IPR036714 Flavinator of succinate dehydrogenase superfamily Thivi_4347 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain Thivi_4347 IPR036010 2Fe-2S ferredoxin-like superfamily Thivi_4347 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal Thivi_4347 IPR009051 Alpha-helical ferredoxin Thivi_4347 IPR012675 Beta-grasp domain superfamily Thivi_4347 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein Thivi_4347 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4347 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4349 IPR011281 Succinate dehydrogenase, flavoprotein subunit Thivi_4349 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Thivi_4349 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Thivi_4349 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4349 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site Thivi_4349 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Thivi_4349 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily Thivi_4349 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thivi_4350 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit Thivi_4350 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor Thivi_4350 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit Thivi_4353 IPR002288 DNA gyrase B subunit, C-terminal Thivi_4353 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Thivi_4353 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal Thivi_4353 IPR018522 DNA topoisomerase, type IIA, conserved site Thivi_4353 IPR006171 TOPRIM domain Thivi_4353 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4353 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4353 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4353 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4353 IPR001241 DNA topoisomerase, type IIA Thivi_4353 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Thivi_4353 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative Thivi_4354 IPR017926 Glutamine amidotransferase Thivi_4354 IPR036921 PurM-like, N-terminal domain superfamily Thivi_4354 IPR036676 PurM-like, C-terminal domain superfamily Thivi_4354 IPR010918 PurM-like, C-terminal domain Thivi_4354 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain Thivi_4354 IPR010073 Phosphoribosylformylglycinamidine synthase PurL Thivi_4354 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal Thivi_4354 IPR029062 Class I glutamine amidotransferase-like Thivi_4354 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily Thivi_4356 IPR011006 CheY-like superfamily Thivi_4356 IPR001789 Signal transduction response regulator, receiver domain Thivi_4357 IPR039104 6-Phosphogluconolactonase Thivi_4357 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase Thivi_4357 IPR037171 NagB/RpiA transferase-like Thivi_4357 IPR005900 6-phosphogluconolactonase, DevB-type Thivi_4358 IPR023430 Peptidase HybD-like domain superfamily Thivi_4358 IPR000671 Peptidase A31 family Thivi_4358 IPR004419 Peptidase A31, hydrogenase expression/formation protein Thivi_4361 IPR013651 ATP-grasp fold, RimK-type Thivi_4361 IPR011761 ATP-grasp fold Thivi_4361 IPR021109 Aspartic peptidase domain superfamily Thivi_4361 IPR041107 RimK, PreATP-grasp domain Thivi_4361 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Thivi_4361 IPR013815 ATP-grasp fold, subdomain 1 Thivi_4364 IPR001036 Acriflavin resistance protein Thivi_4364 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4364 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thivi_4365 IPR035901 GIY-YIG endonuclease superfamily Thivi_4365 IPR001943 UVR domain Thivi_4365 IPR036876 UVR domain superfamily Thivi_4365 IPR004791 UvrABC system, subunit C Thivi_4365 IPR001162 UvrC family homology region Thivi_4365 IPR038476 UvrC homology region 2 superfamily Thivi_4365 IPR000305 GIY-YIG endonuclease Thivi_4365 IPR010994 RuvA domain 2-like Thivi_4366 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Thivi_4366 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial Thivi_4366 IPR000462 CDP-alcohol phosphatidyltransferase Thivi_4374 IPR006118 Recombinase, conserved site Thivi_4374 IPR006119 Resolvase, N-terminal catalytic domain Thivi_4374 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily Thivi_4374 IPR006120 Resolvase, HTH domain Thivi_4379 IPR036397 Ribonuclease H superfamily Thivi_4379 IPR025948 HTH-like domain Thivi_4379 IPR012337 Ribonuclease H-like superfamily Thivi_4379 IPR001584 Integrase, catalytic core Thivi_4401 IPR000119 Histone-like DNA-binding protein Thivi_4401 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily Thivi_4410 IPR014054 Bacteriophage regulatory protein, Rha family Thivi_4410 IPR018877 Bacteriophage P22, Orf201, C-terminal Thivi_4423 IPR006528 Phage head morphogenesis domain Thivi_4449 IPR029057 Phosphoribosyltransferase-like Thivi_4449 IPR005764 Adenine phosphoribosyl transferase Thivi_4449 IPR000836 Phosphoribosyltransferase domain Thivi_4450 IPR000845 Nucleoside phosphorylase domain Thivi_4450 IPR018099 Purine phosphorylase, family 2, conserved site Thivi_4450 IPR035994 Nucleoside phosphorylase superfamily Thivi_4450 IPR010044 Methylthioadenosine phosphorylase (MTAP) Thivi_4453 IPR003593 AAA+ ATPase domain Thivi_4453 IPR011006 CheY-like superfamily Thivi_4453 IPR009057 Homeobox-like domain superfamily Thivi_4453 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4453 IPR002078 RNA polymerase sigma factor 54 interaction domain Thivi_4453 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_4453 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_4453 IPR025944 Sigma-54 interaction domain, conserved site Thivi_4453 IPR002197 DNA binding HTH domain, Fis-type Thivi_4453 IPR001789 Signal transduction response regulator, receiver domain Thivi_4454 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4454 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4454 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4454 IPR005467 Histidine kinase domain Thivi_4454 IPR000700 PAS-associated, C-terminal Thivi_4454 IPR035965 PAS domain superfamily Thivi_4454 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4454 IPR000014 PAS domain Thivi_4454 IPR003660 HAMP domain Thivi_4454 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4454 IPR013767 PAS fold Thivi_4463 IPR003660 HAMP domain Thivi_4463 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4463 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4463 IPR013727 Two-component sensor kinase, N-terminal Thivi_4463 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4463 IPR005467 Histidine kinase domain Thivi_4463 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4463 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4464 IPR001789 Signal transduction response regulator, receiver domain Thivi_4464 IPR011006 CheY-like superfamily Thivi_4464 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4464 IPR039420 Transcriptional regulatory protein WalR-like Thivi_4464 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_4465 IPR027469 Cation efflux transmembrane domain superfamily Thivi_4465 IPR027470 Cation efflux protein, cytoplasmic domain Thivi_4465 IPR002524 Cation efflux protein Thivi_4465 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Thivi_4465 IPR023783 Cation efflux pump FieF Thivi_4469 IPR012292 Globin/Protoglobin Thivi_4469 IPR023950 Flavohemoprotein Thivi_4469 IPR017927 FAD-binding domain, ferredoxin reductase-type Thivi_4469 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Thivi_4469 IPR017938 Riboflavin synthase-like beta-barrel Thivi_4469 IPR009050 Globin-like superfamily Thivi_4469 IPR000971 Globin Thivi_4469 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_4469 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thivi_4469 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Thivi_4469 IPR001834 NADH:cytochrome b5 reductase-like Thivi_4474 IPR001867 OmpR/PhoB-type DNA-binding domain Thivi_4474 IPR001789 Signal transduction response regulator, receiver domain Thivi_4474 IPR011006 CheY-like superfamily Thivi_4474 IPR039420 Transcriptional regulatory protein WalR-like Thivi_4474 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4475 IPR005467 Histidine kinase domain Thivi_4475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain Thivi_4475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily Thivi_4475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thivi_4475 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4475 IPR003660 HAMP domain Thivi_4475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4476 IPR029058 Alpha/Beta hydrolase fold Thivi_4476 IPR000801 Putative esterase Thivi_4476 IPR014186 S-formylglutathione hydrolase Thivi_4477 IPR016181 Acyl-CoA N-acyltransferase Thivi_4477 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain Thivi_4477 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Thivi_4477 IPR038321 TmcA, C-terminal domain superfamily Thivi_4477 IPR032672 TmcA/NAT10/Kre33 Thivi_4477 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4477 IPR007807 Helicase domain Thivi_4477 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA Thivi_4477 IPR000182 GNAT domain Thivi_4478 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Thivi_4478 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4480 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_4480 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_4480 IPR023753 FAD/NAD(P)-binding domain Thivi_4480 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4480 IPR006311 Twin-arginine translocation pathway, signal sequence Thivi_4480 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily Thivi_4480 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thivi_4481 IPR036909 Cytochrome c-like domain superfamily Thivi_4481 IPR024167 Cytochrome c4-like Thivi_4481 IPR009056 Cytochrome c-like domain Thivi_4483 IPR011031 Multihaem cytochrome Thivi_4483 IPR024717 Denitrification system component NapC/NirT/NrfH Thivi_4483 IPR036280 Multiheme cytochrome superfamily Thivi_4483 IPR038266 NapC/NirT cytochrome c superfamily Thivi_4483 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_4486 IPR001296 Glycosyl transferase, family 1 Thivi_4486 IPR011835 Bacterial/plant glycogen synthase Thivi_4486 IPR013534 Starch synthase, catalytic domain Thivi_4487 IPR036277 SMCs flexible hinge superfamily Thivi_4487 IPR024704 Structural maintenance of chromosomes protein Thivi_4487 IPR003395 RecF/RecN/SMC, N-terminal Thivi_4487 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Thivi_4487 IPR010935 SMCs flexible hinge Thivi_4487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4488 IPR011919 Cell division protein ZipA Thivi_4488 IPR007449 ZipA, C-terminal FtsZ-binding domain Thivi_4488 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily Thivi_4489 IPR013839 NAD-dependent DNA ligase, adenylation Thivi_4489 IPR033136 NAD-dependent DNA ligase, conserved site Thivi_4489 IPR018239 NAD-dependent DNA ligase, active site Thivi_4489 IPR001679 NAD-dependent DNA ligase Thivi_4489 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thivi_4489 IPR013840 NAD-dependent DNA ligase, N-terminal Thivi_4489 IPR004150 NAD-dependent DNA ligase, OB-fold Thivi_4489 IPR010994 RuvA domain 2-like Thivi_4489 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Thivi_4489 IPR041663 DisA/LigA, helix-hairpin-helix motif Thivi_4489 IPR036420 BRCT domain superfamily Thivi_4489 IPR001357 BRCT domain Thivi_4489 IPR012340 Nucleic acid-binding, OB-fold Thivi_4491 IPR018338 Carbonic anhydrase, alpha-class, conserved site Thivi_4491 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_4491 IPR023561 Carbonic anhydrase, alpha-class Thivi_4491 IPR041891 Carbonic anhydrase, prokaryotic-like Thivi_4491 IPR001148 Alpha carbonic anhydrase domain Thivi_4494 IPR002016 Haem peroxidase Thivi_4494 IPR019794 Peroxidase, active site Thivi_4494 IPR010255 Haem peroxidase superfamily Thivi_4494 IPR019793 Peroxidases heam-ligand binding site Thivi_4494 IPR000763 Catalase-peroxidase haem Thivi_4497 IPR001360 Glycoside hydrolase family 1 Thivi_4497 IPR018120 Glycoside hydrolase family 1, active site Thivi_4497 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase Thivi_4497 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site Thivi_4497 IPR017853 Glycoside hydrolase superfamily Thivi_4498 IPR017871 ABC transporter, conserved site Thivi_4498 IPR003593 AAA+ ATPase domain Thivi_4498 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4498 IPR011527 ABC transporter type 1, transmembrane domain Thivi_4498 IPR036640 ABC transporter type 1, transmembrane domain superfamily Thivi_4498 IPR003439 ABC transporter-like Thivi_4500 IPR011831 Glucose-1-phosphate adenylyltransferase Thivi_4500 IPR005836 ADP-glucose pyrophosphorylase, conserved site Thivi_4500 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Thivi_4500 IPR005835 Nucleotidyl transferase domain Thivi_4500 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4500 IPR011004 Trimeric LpxA-like superfamily Thivi_4505 IPR029787 Nucleotide cyclase Thivi_4505 IPR039435 Diguanylate cyclase DosC, globin sensor domain Thivi_4505 IPR012292 Globin/Protoglobin Thivi_4505 IPR009050 Globin-like superfamily Thivi_4505 IPR000160 GGDEF domain Thivi_4506 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4506 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Thivi_4506 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Thivi_4507 IPR020483 Uncharacterised protein family YgbA Thivi_4510 IPR002559 Transposase, IS4-like Thivi_4510 IPR032806 H repeat-associated protein, N-terminal Thivi_4511 IPR002559 Transposase, IS4-like Thivi_4511 IPR032806 H repeat-associated protein, N-terminal Thivi_4514 IPR002729 CRISPR-associated protein Cas1 Thivi_4514 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain Thivi_4514 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain Thivi_4515 IPR011335 Restriction endonuclease type II-like Thivi_4515 IPR008538 Domain of unknown function DUF820 Thivi_4525 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Thivi_4525 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain Thivi_4525 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily Thivi_4525 IPR011167 Iron-dependent fumarate hydratase Thivi_4525 IPR020557 Fumarate lyase, conserved site Thivi_4526 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4526 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4526 IPR007432 Protein of unknown function DUF480 Thivi_4527 IPR002792 TRAM domain Thivi_4527 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_4527 IPR007197 Radical SAM Thivi_4527 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_4527 IPR041582 RimO, TRAM domain Thivi_4527 IPR006638 Elp3/MiaB/NifB Thivi_4527 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Thivi_4527 IPR005839 Methylthiotransferase Thivi_4527 IPR020612 Methylthiotransferase, conserved site Thivi_4527 IPR013848 Methylthiotransferase, N-terminal Thivi_4529 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Thivi_4531 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thivi_4531 IPR006656 Molybdopterin oxidoreductase Thivi_4531 IPR006657 Molybdopterin dinucleotide-binding domain Thivi_4531 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_4532 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4532 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4533 IPR007059 DMSO reductase anchor subunit (DmsC) Thivi_4535 IPR006315 Outer membrane autotransporter barrel Thivi_4535 IPR008265 Lipase, GDSL, active site Thivi_4535 IPR036709 Autotransporter beta-domain superfamily Thivi_4535 IPR001087 GDSL lipase/esterase Thivi_4535 IPR017186 Lipase, autotransporter EstA Thivi_4535 IPR005546 Autotransporter beta-domain Thivi_4535 IPR036514 SGNH hydrolase superfamily Thivi_4543 IPR000719 Protein kinase domain Thivi_4543 IPR011009 Protein kinase-like domain superfamily Thivi_4543 IPR005543 PASTA domain Thivi_4543 IPR008271 Serine/threonine-protein kinase, active site Thivi_4543 IPR017441 Protein kinase, ATP binding site Thivi_4544 IPR007451 High frequency lysogenization protein HflD Thivi_4544 IPR035932 HflD-like superfamily Thivi_4545 IPR023382 Adenine nucleotide alpha hydrolase-like domains Thivi_4545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4545 IPR004506 tRNA-specific 2-thiouridylase Thivi_4547 IPR000073 Alpha/beta hydrolase fold-1 Thivi_4547 IPR017497 Putative magnesium chelatase accessory protein Thivi_4547 IPR029058 Alpha/Beta hydrolase fold Thivi_4549 IPR002737 MEMO1 family Thivi_4550 IPR001082 Fimbrial protein pilin Thivi_4550 IPR012902 Prokaryotic N-terminal methylation site Thivi_4552 IPR008258 Transglycosylase SLT domain 1 Thivi_4552 IPR023346 Lysozyme-like domain superfamily Thivi_4552 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily Thivi_4552 IPR012289 Lytic transglycosylase, superhelical linker Thivi_4552 IPR000189 Prokaryotic transglycosylase, active site Thivi_4552 IPR008939 Lytic transglycosylase, superhelical U-shaped Thivi_4554 IPR003477 mRNA interferase PemK-like Thivi_4554 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_4556 IPR002781 Transmembrane protein TauE-like Thivi_4559 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4559 IPR001036 Acriflavin resistance protein Thivi_4560 IPR006143 RND efflux pump, membrane fusion protein Thivi_4560 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_4560 IPR022824 Multidrug resistance protein MdtA Thivi_4561 IPR023576 UbiE/COQ5 methyltransferase, conserved site Thivi_4561 IPR004033 UbiE/COQ5 methyltransferase Thivi_4561 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4562 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat Thivi_4562 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_4562 IPR013760 DNA topoisomerase, type IIA-like domain superfamily Thivi_4562 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Thivi_4562 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Thivi_4562 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily Thivi_4562 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative Thivi_4564 IPR004453 Epoxyqueuosine reductase QueG Thivi_4564 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4564 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4564 IPR009051 Alpha-helical ferredoxin Thivi_4564 IPR013542 Domain of unknown function DUF1730 Thivi_4567 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Thivi_4567 IPR003918 NADH:ubiquinone oxidoreductase Thivi_4570 IPR022737 RNA polymerase recycling, bacterial, C-terminal Thivi_4570 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4570 IPR040766 RapA, N-terminal Tudor-like domain 2 Thivi_4570 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_4570 IPR001650 Helicase, C-terminal Thivi_4570 IPR023949 RNA polymerase-associated protein RapA Thivi_4570 IPR040765 RapA, N-terminal Tudor like domain 1 Thivi_4570 IPR000330 SNF2-related, N-terminal domain Thivi_4570 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4572 IPR024084 Isopropylmalate dehydrogenase-like domain Thivi_4572 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Thivi_4572 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic Thivi_4573 IPR011129 Cold shock domain Thivi_4573 IPR012751 CspD, cold shock Thivi_4573 IPR012156 Cold shock, CspA Thivi_4573 IPR019844 Cold-shock (CSD) domain Thivi_4573 IPR012340 Nucleic acid-binding, OB-fold Thivi_4573 IPR002059 Cold-shock protein, DNA-binding Thivi_4574 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4574 IPR003769 Adaptor protein ClpS, core Thivi_4574 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Thivi_4575 IPR036628 Clp, N-terminal domain superfamily Thivi_4575 IPR003593 AAA+ ATPase domain Thivi_4575 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4575 IPR041546 ClpA/ClpB, AAA lid domain Thivi_4575 IPR028299 ClpA/B, conserved site 2 Thivi_4575 IPR018368 ClpA/B, conserved site 1 Thivi_4575 IPR001270 ClpA/B family Thivi_4575 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Thivi_4575 IPR004176 Clp, N-terminal Thivi_4575 IPR019489 Clp ATPase, C-terminal Thivi_4575 IPR003959 ATPase, AAA-type, core Thivi_4578 IPR006322 Glutathione reductase, eukaryote/bacterial Thivi_4578 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily Thivi_4578 IPR023753 FAD/NAD(P)-binding domain Thivi_4578 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thivi_4578 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Thivi_4578 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I Thivi_4578 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4579 IPR013740 Redoxin Thivi_4579 IPR011767 Glutaredoxin active site Thivi_4579 IPR002109 Glutaredoxin Thivi_4579 IPR037944 Peroxiredoxin-5-like Thivi_4579 IPR013766 Thioredoxin domain Thivi_4579 IPR036249 Thioredoxin-like superfamily Thivi_4581 IPR003836 Glucokinase Thivi_4582 IPR006122 Heavy metal-associated domain, copper ion-binding Thivi_4582 IPR036163 Heavy metal-associated domain superfamily Thivi_4582 IPR017969 Heavy-metal-associated, conserved site Thivi_4582 IPR006121 Heavy metal-associated domain, HMA Thivi_4583 IPR010827 POTRA domain, BamA/TamA-like Thivi_4583 IPR039910 Surface antigen D15-like Thivi_4583 IPR034746 POTRA domain Thivi_4583 IPR035243 TamA, POTRA domain 1 Thivi_4583 IPR000184 Bacterial surface antigen (D15) Thivi_4584 IPR007452 Translocation and assembly module TamB Thivi_4585 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Thivi_4585 IPR004960 Bacterial lipid A biosynthesis acyltransferase Thivi_4587 IPR022488 Polyphosphate kinase-2-related Thivi_4587 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4587 IPR022489 Polyphosphate:AMP phosphotransferase Thivi_4589 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4589 IPR011008 Dimeric alpha-beta barrel Thivi_4589 IPR000485 AsnC-type HTH domain Thivi_4589 IPR019888 Transcription regulator AsnC-type Thivi_4589 IPR011991 ArsR-like helix-turn-helix domain Thivi_4589 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Thivi_4589 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4590 IPR000891 Pyruvate carboxyltransferase Thivi_4590 IPR039371 LeuA, N-terminal catalytic TIM barrel domain Thivi_4590 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily Thivi_4590 IPR013785 Aldolase-type TIM barrel Thivi_4590 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thivi_4590 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thivi_4590 IPR005668 2-isopropylmalate synthase Thivi_4592 IPR006674 HD domain Thivi_4592 IPR006675 HDIG domain Thivi_4592 IPR021812 Protein of unknown function DUF3391 Thivi_4592 IPR037522 HD-GYP domain Thivi_4592 IPR003607 HD/PDEase domain Thivi_4593 IPR004604 DNA recombination/repair protein RecN Thivi_4593 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4593 IPR003395 RecF/RecN/SMC, N-terminal Thivi_4594 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal Thivi_4594 IPR002504 NAD kinase Thivi_4594 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal Thivi_4594 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Thivi_4595 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4595 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Thivi_4595 IPR029016 GAF-like domain superfamily Thivi_4595 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain Thivi_4595 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4595 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal Thivi_4595 IPR002571 Heat-inducible transcription repressor HrcA Thivi_4596 IPR009012 GrpE nucleotide exchange factor, head Thivi_4596 IPR013805 GrpE nucleotide exchange factor, coiled-coil Thivi_4596 IPR000740 GrpE nucleotide exchange factor Thivi_4597 IPR013126 Heat shock protein 70 family Thivi_4597 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Thivi_4597 IPR018181 Heat shock protein 70, conserved site Thivi_4597 IPR012725 Chaperone DnaK Thivi_4597 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Thivi_4598 IPR001623 DnaJ domain Thivi_4598 IPR002939 Chaperone DnaJ, C-terminal Thivi_4598 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Thivi_4598 IPR036869 Chaperone J-domain superfamily Thivi_4598 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Thivi_4598 IPR008971 HSP40/DnaJ peptide-binding Thivi_4598 IPR012724 Chaperone DnaJ Thivi_4598 IPR018253 DnaJ domain, conserved site Thivi_4599 IPR022664 Dihydrodipicolinate reductase, conserved site Thivi_4599 IPR023940 Dihydrodipicolinate reductase Thivi_4599 IPR022663 Dihydrodipicolinate reductase, C-terminal Thivi_4599 IPR036291 NAD(P)-binding domain superfamily Thivi_4599 IPR000846 Dihydrodipicolinate reductase, N-terminal Thivi_4602 IPR036909 Cytochrome c-like domain superfamily Thivi_4602 IPR009056 Cytochrome c-like domain Thivi_4605 IPR010359 IrrE N-terminal-like domain Thivi_4611 IPR006935 Helicase/UvrB, N-terminal Thivi_4611 IPR001650 Helicase, C-terminal Thivi_4611 IPR011332 Zinc-binding ribosomal protein Thivi_4611 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4611 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4621 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thivi_4621 IPR013762 Integrase-like, catalytic domain superfamily Thivi_4621 IPR025166 Integrase, DNA-binding domain Thivi_4621 IPR010998 Integrase/recombinase, N-terminal Thivi_4621 IPR002104 Integrase, catalytic domain Thivi_4621 IPR038488 Integrase, DNA-binding domain superfamily Thivi_4622 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4622 IPR023703 Membrane-bound lytic murein transglycosylase F Thivi_4622 IPR023346 Lysozyme-like domain superfamily Thivi_4622 IPR000189 Prokaryotic transglycosylase, active site Thivi_4622 IPR008258 Transglycosylase SLT domain 1 Thivi_4623 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein Thivi_4623 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_4625 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type Thivi_4625 IPR006183 6-phosphogluconate dehydrogenase Thivi_4625 IPR013328 6-phosphogluconate dehydrogenase, domain 2 Thivi_4625 IPR006114 6-phosphogluconate dehydrogenase, C-terminal Thivi_4625 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thivi_4625 IPR036291 NAD(P)-binding domain superfamily Thivi_4625 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Thivi_4626 IPR014756 Immunoglobulin E-set Thivi_4626 IPR013783 Immunoglobulin-like fold Thivi_4626 IPR017853 Glycoside hydrolase superfamily Thivi_4626 IPR011837 Glycogen debranching enzyme, GlgX type Thivi_4626 IPR013780 Glycosyl hydrolase, all-beta Thivi_4626 IPR004193 Glycoside hydrolase, family 13, N-terminal Thivi_4626 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thivi_4628 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 Thivi_4628 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_4628 IPR015421 Pyridoxal phosphate-dependent transferase, major domain Thivi_4628 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4628 IPR000192 Aminotransferase class V domain Thivi_4630 IPR029052 Metallo-dependent phosphatase-like Thivi_4630 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain Thivi_4630 IPR014576 Predicted phosphoesterase, YhaO type Thivi_4630 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type Thivi_4631 IPR038734 Uncharacterized protein YhaN, AAA domain Thivi_4631 IPR027417 P-loop containing nucleoside triphosphate hydrolase