Thivi_0217 87198d180e9507329c49b91528dfcd97 408 SUPERFAMILY SSF55021 1 83 1.32E-12 T 13-10-2018 Thivi_0217 87198d180e9507329c49b91528dfcd97 408 Gene3D G3DSA:3.40.50.1000 105 396 1.3E-88 T 13-10-2018 IPR023214 HAD superfamily Thivi_0217 87198d180e9507329c49b91528dfcd97 408 Pfam PF13740 ACT domain 3 79 8.7E-27 T 13-10-2018 Thivi_0217 87198d180e9507329c49b91528dfcd97 408 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 192 362 1.6E-35 T 13-10-2018 Thivi_0217 87198d180e9507329c49b91528dfcd97 408 Gene3D G3DSA:3.30.70.260 3 83 1.5E-14 T 13-10-2018 Thivi_0217 87198d180e9507329c49b91528dfcd97 408 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 177 395 8.9E-80 T 13-10-2018 Thivi_0217 87198d180e9507329c49b91528dfcd97 408 SUPERFAMILY SSF56784 188 395 9.34E-56 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_0217 87198d180e9507329c49b91528dfcd97 408 Pfam PF12710 haloacid dehalogenase-like hydrolase 193 360 1.0E-25 T 13-10-2018 Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 SMART SM00490 256 337 2.4E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 SUPERFAMILY SSF52540 1 207 7.2E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 Pfam PF00270 DEAD/DEAH box helicase 25 192 8.7E-51 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 Gene3D G3DSA:3.40.50.300 1 208 1.9E-74 T 13-10-2018 Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 Pfam PF00271 Helicase conserved C-terminal domain 232 337 2.1E-23 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 SMART SM00487 20 220 4.4E-60 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 Gene3D G3DSA:3.40.50.300 213 376 1.6E-43 T 13-10-2018 Thivi_0681 707b8f9522e16cfe17872b77714890bc 439 SUPERFAMILY SSF52540 144 352 2.16E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 Gene3D G3DSA:1.10.238.10 31 98 1.3E-10 T 13-10-2018 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 ProSitePatterns PS00018 EF-hand calcium-binding domain. 231 243 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 SMART SM00054 152 180 13.0 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 SMART SM00054 70 98 0.88 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 SMART SM00054 31 59 1.7 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 SMART SM00054 222 250 0.38 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 ProSitePatterns PS00018 EF-hand calcium-binding domain. 40 52 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 Pfam PF13202 EF hand 73 92 0.0013 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 ProSitePatterns PS00018 EF-hand calcium-binding domain. 79 91 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 SUPERFAMILY SSF47473 34 246 8.98E-17 T 13-10-2018 IPR011992 EF-hand domain pair Thivi_0034 c326e5407ea6933a07f3dea58157330c 294 Pfam PF13499 EF-hand domain pair 156 246 4.3E-7 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55781 658 836 1.13E-27 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00086 927 968 88.0 T 13-10-2018 IPR001610 PAC motif Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00086 619 661 0.0018 T 13-10-2018 IPR001610 PAC motif Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1411 1525 3.6E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF47384 1280 1363 1.71E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF13185 GAF domain 690 835 3.6E-17 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF13185 GAF domain 1138 1274 1.6E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF01627 Hpt domain 1873 1954 8.8E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55785 396 528 6.77E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF52172 1701 1820 1.99E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00091 855 921 9.0E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00091 998 1064 3.2E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00091 407 472 8.5E-6 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00091 542 611 0.004 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:1.10.287.130 1287 1363 3.2E-23 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1298 1362 1.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:2.10.70.100 617 663 1.2E-11 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF47226 1798 1950 5.89E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1511 1524 7.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1487 1505 7.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1452 1466 7.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1470 1480 7.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF08447 PAS fold 567 654 9.0E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00387 1411 1527 5.2E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00388 1297 1362 1.7E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55785 849 966 3.14E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.40.50.2300 1542 1670 2.8E-19 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00073 1863 1958 1.0E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:1.20.120.160 1851 1962 2.4E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF00072 Response regulator receiver domain 1545 1662 1.6E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF00072 Response regulator receiver domain 1705 1815 5.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.20 843 979 2.2E-18 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.20 392 539 5.7E-20 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.40.50.2300 177 344 1.3E-15 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55785 988 1113 7.5E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.20 540 611 1.1E-16 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.40.50.2300 1690 1820 8.8E-39 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.40 672 839 9.1E-27 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.565.10 1364 1527 2.6E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55781 1122 1298 3.49E-14 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.40.50.2300 115 331 1.3E-15 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF13188 PAS domain 407 451 3.1E-8 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.20 985 1118 1.5E-23 T 13-10-2018 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 538 668 2.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 994 1124 2.0E-16 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 852 975 9.4E-14 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 403 536 2.8E-12 T 13-10-2018 IPR000014 PAS domain Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00065 1139 1285 6.0E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00065 690 844 0.0017 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF00989 PAS fold 856 965 3.9E-12 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Pfam PF00989 PAS fold 998 1112 8.3E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00448 1543 1662 9.6E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SMART SM00448 1702 1815 8.6E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55785 527 659 3.14E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 Gene3D G3DSA:3.30.450.40 1119 1286 2.7E-16 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF52172 1542 1667 3.84E-19 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0673 df339437b41ff8928032f4a077c3507c 2046 SUPERFAMILY SSF55874 1351 1522 7.73E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 SUPERFAMILY SSF55681 116 588 7.11E-110 T 13-10-2018 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Gene3D G3DSA:3.30.930.10 119 586 4.7E-196 T 13-10-2018 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Gene3D G3DSA:3.30.1360.30 275 425 4.7E-196 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.2E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 479 495 1.2E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 523 537 1.2E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.2E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Pfam PF02938 GAD domain 311 410 5.5E-25 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 SUPERFAMILY SSF55261 293 424 1.44E-40 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 589 34.298 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 SUPERFAMILY SSF50249 1 105 7.05E-34 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 563 3.0E-110 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 587 3.7E-246 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Gene3D G3DSA:2.40.50.140 1 106 7.5E-36 T 13-10-2018 Thivi_1027 b4a7adf685ba27fe5d90481551a4e93a 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 99 3.9E-17 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Thivi_0576 aa4d8ab0bea49b419027108801c49ff2 320 SUPERFAMILY SSF52540 42 283 5.4E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0576 aa4d8ab0bea49b419027108801c49ff2 320 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 218 310 3.3E-20 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_0576 aa4d8ab0bea49b419027108801c49ff2 320 SMART SM00382 61 214 3.0E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0576 aa4d8ab0bea49b419027108801c49ff2 320 Gene3D G3DSA:3.40.50.300 47 223 2.9E-30 T 13-10-2018 Thivi_0576 aa4d8ab0bea49b419027108801c49ff2 320 Pfam PF07728 AAA domain (dynein-related subfamily) 65 187 1.5E-21 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-65 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.6E-22 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 Gene3D G3DSA:1.10.10.2720 73 144 6.1E-26 T 13-10-2018 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 SMART SM00649 9 141 3.1E-84 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 SUPERFAMILY SSF54747 3 73 1.44E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-14 T 13-10-2018 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.575 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 Gene3D G3DSA:3.30.1550.10 2 72 7.6E-36 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.1E-31 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal Thivi_4190 de4360ac1c14e2272cbf960b2b0fd53d 144 SUPERFAMILY SSF46906 68 141 2.88E-25 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Thivi_4107 248f974e249a0685ba14750725e08da0 210 SUPERFAMILY SSF46894 140 209 3.3E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 7.4E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 Gene3D G3DSA:3.40.50.12740 2 209 2.2E-59 T 13-10-2018 Thivi_4107 248f974e249a0685ba14750725e08da0 210 SMART SM00448 2 115 5.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4107 248f974e249a0685ba14750725e08da0 210 SUPERFAMILY SSF52172 1 131 4.41E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4107 248f974e249a0685ba14750725e08da0 210 SMART SM00421 146 203 4.0E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.9E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4107 248f974e249a0685ba14750725e08da0 210 Pfam PF00072 Response regulator receiver domain 5 115 5.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2976 5ce9eb5d470f1ad2b1a3222983ba29f4 213 Gene3D G3DSA:3.40.30.10 39 204 6.9E-47 T 13-10-2018 Thivi_2976 5ce9eb5d470f1ad2b1a3222983ba29f4 213 SUPERFAMILY SSF52833 47 203 7.8E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2976 5ce9eb5d470f1ad2b1a3222983ba29f4 213 Pfam PF02630 SCO1/SenC 59 186 2.3E-33 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 524 4.8E-252 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 510 3.5E-44 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 SUPERFAMILY SSF52540 8 274 1.39E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Gene3D G3DSA:3.30.70.3280 387 526 1.1E-48 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Gene3D G3DSA:3.40.50.300 70 376 5.8E-110 T 13-10-2018 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Gene3D G3DSA:3.40.50.300 108 272 5.8E-110 T 13-10-2018 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 SUPERFAMILY SSF50447 258 389 1.88E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.4E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.4E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 52.009 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 SUPERFAMILY SSF54980 389 465 2.23E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 5.6E-48 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.4E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2186 3003e5d87bdff11be39d6ecf78e0d017 526 Pfam PF03144 Elongation factor Tu domain 2 311 377 2.3E-7 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 598 5.3E-238 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 SMART SM00382 189 328 1.1E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Gene3D G3DSA:3.40.50.300 147 325 1.8E-69 T 13-10-2018 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 SUPERFAMILY SSF52540 152 396 2.39E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Gene3D G3DSA:2.40.50.920 26 104 1.0E-13 T 13-10-2018 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Gene3D G3DSA:1.10.8.60 327 401 3.3E-29 T 13-10-2018 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 SUPERFAMILY SSF140990 407 608 2.75E-77 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 609 37.677 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 4.9E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Gene3D G3DSA:1.20.58.760 402 607 9.8E-75 T 13-10-2018 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Pfam PF06480 FtsH Extracellular 8 87 7.4E-8 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Thivi_2447 351c5f8f59af7174ae8c43a14994c888 640 Pfam PF01434 Peptidase family M41 387 597 5.9E-83 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 SMART SM01409 8 60 3.2E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 Gene3D G3DSA:3.90.940.10 1 86 5.4E-26 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 SUPERFAMILY SSF63562 1 72 7.67E-25 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 17.166 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.1E-21 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_3323 dc61c639e686ad73b11870040946cde0 100 Pfam PF01192 RNA polymerase Rpb6 8 58 2.0E-16 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 Pfam PF08544 GHMP kinases C terminal 219 271 8.2E-6 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 SUPERFAMILY SSF55060 179 294 1.25E-30 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 Pfam PF00288 GHMP kinases N terminal domain 105 162 1.1E-10 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 PIRSF PIRSF010376 22 294 2.7E-79 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 Gene3D G3DSA:3.30.230.10 11 178 7.0E-53 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 23 289 30.573 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 SUPERFAMILY SSF54211 25 176 9.87E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 25 292 3.1E-75 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Thivi_4176 2b312cdbac87c73f3284479c0ed654d3 301 Gene3D G3DSA:3.30.70.890 179 296 2.4E-28 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 SUPERFAMILY SSF54534 82 157 2.22E-21 T 13-10-2018 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 PIRSF PIRSF006092 1 158 1.7E-48 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 Gene3D G3DSA:3.10.50.30 76 158 3.8E-27 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.7E-25 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.1E-54 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 SUPERFAMILY SSF46557 3 78 1.96E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.364 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.7E-30 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Thivi_1768 6c8250d0558c8fbd16d707317e1a9338 158 Gene3D G3DSA:1.10.287.180 1 75 1.6E-31 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Thivi_2463 646bcc398b102114dadb2b7f9473c633 290 SUPERFAMILY SSF109604 6 235 4.57E-62 T 13-10-2018 Thivi_2463 646bcc398b102114dadb2b7f9473c633 290 Pfam PF08668 HDOD domain 15 205 2.6E-59 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_2463 646bcc398b102114dadb2b7f9473c633 290 Gene3D G3DSA:1.10.3210.10 2 266 6.0E-70 T 13-10-2018 Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 SUPERFAMILY SSF56176 356 436 1.06E-13 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 Pfam PF00571 CBS domain 291 340 0.0027 T 13-10-2018 IPR000644 CBS domain Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 Gene3D G3DSA:3.10.580.10 203 347 2.3E-35 T 13-10-2018 Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 Pfam PF03471 Transporter associated domain 358 436 1.1E-13 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 Gene3D G3DSA:3.30.465.10 348 436 9.5E-15 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 SMART SM01091 356 438 1.4E-13 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 Pfam PF01595 Domain of unknown function DUF21 8 202 1.7E-37 T 13-10-2018 IPR002550 CNNM, transmembrane domain Thivi_2990 5ed47beff15096a7b660ae2b4b4d33fc 445 SUPERFAMILY SSF54631 216 350 5.81E-21 T 13-10-2018 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 Pfam PF01425 Amidase 22 463 2.5E-165 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 472 2.6E-186 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 Gene3D G3DSA:3.90.1300.10 1 483 9.5E-211 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 SUPERFAMILY SSF75304 3 480 4.19E-172 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Thivi_3824 271c2a3daf868d788b55d73d0aac60a9 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 93.917 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Thivi_2299 f68e7a7a18dd71e3bfcc49917ed2d222 183 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 34 178 1.8E-38 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Thivi_2299 f68e7a7a18dd71e3bfcc49917ed2d222 183 Gene3D G3DSA:2.60.40.4150 56 183 1.5E-40 T 13-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily Thivi_2299 f68e7a7a18dd71e3bfcc49917ed2d222 183 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 38 175 1.5E-39 T 13-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 188 4.4E-51 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 Gene3D G3DSA:3.90.950.10 6 197 3.8E-60 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 SUPERFAMILY SSF52972 5 189 2.16E-57 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 Pfam PF02545 Maf-like protein 8 190 2.6E-44 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 Hamap MF_00528 Septum formation protein Maf [maf]. 7 195 29.941 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4623 0a18472198e3e29344b2bc2f1ebe9926 198 PIRSF PIRSF006305 1 197 1.3E-43 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_2286 404e94b771dcee74126da851d59e0112 186 Pfam PF04965 Gene 25-like lysozyme 55 158 1.1E-24 T 13-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Thivi_2286 404e94b771dcee74126da851d59e0112 186 SUPERFAMILY SSF160719 54 169 7.59E-11 T 13-10-2018 Thivi_2286 404e94b771dcee74126da851d59e0112 186 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 28 177 8.4E-28 T 13-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82693 668 856 6.02E-28 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82693 38 133 6.28E-29 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1032 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.70.1430 38 816 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82866 830 1026 4.71E-43 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82866 297 498 3.66E-51 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82693 563 667 3.14E-30 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82714 718 806 1.31E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.2090.10 717 808 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82693 135 330 6.54E-17 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 SUPERFAMILY SSF82714 182 271 9.68E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.1E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.70.1430 565 664 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:3.30.70.1440 665 865 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:1.20.1640.10 8 510 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Gene3D G3DSA:1.20.1640.10 511 1022 0.0 T 13-10-2018 Thivi_2801 b18482b129b4f380c1b34610aa35b451 1034 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.40.50.2300 1003 1134 2.6E-21 T 13-10-2018 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF55781 528 710 1.09E-13 T 13-10-2018 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00086 474 516 2.3E-8 T 13-10-2018 IPR001610 PAC motif Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.40.50.2300 730 860 1.0E-33 T 13-10-2018 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.20.20.450 1144 1393 7.5E-79 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF47226 876 982 1.18E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00052 1138 1382 4.7E-76 T 13-10-2018 IPR001633 EAL domain Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF52172 1003 1128 7.26E-19 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF00563 EAL domain 1146 1377 2.6E-60 T 13-10-2018 IPR001633 EAL domain Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.30.450.40 525 705 1.7E-16 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF141868 1145 1389 1.83E-75 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:1.20.120.160 870 982 3.3E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF13426 PAS domain 416 515 1.8E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF13185 GAF domain 544 693 8.0E-19 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00065 525 703 4.0E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00448 265 378 5.9E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00448 1003 1123 2.4E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SMART SM00448 737 852 6.8E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF55785 413 512 5.23E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF00072 Response regulator receiver domain 267 377 1.2E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF00072 Response regulator receiver domain 1005 1122 1.2E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF00072 Response regulator receiver domain 739 852 4.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF52172 260 394 3.42E-16 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Pfam PF01627 Hpt domain 895 977 2.5E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 413 518 8.2E-17 T 13-10-2018 IPR000014 PAS domain Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.30.450.20 395 524 7.4E-31 T 13-10-2018 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 Gene3D G3DSA:3.40.50.2300 262 386 8.7E-11 T 13-10-2018 Thivi_1313 272788fbec40b35bc83217f28f3b82e3 1396 SUPERFAMILY SSF52172 736 859 3.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2193 f902f9c5c641f114e0fa20dc2b8974c5 387 Pfam PF00534 Glycosyl transferases group 1 203 340 3.8E-18 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_2193 f902f9c5c641f114e0fa20dc2b8974c5 387 SUPERFAMILY SSF53756 23 363 2.16E-51 T 13-10-2018 Thivi_2193 f902f9c5c641f114e0fa20dc2b8974c5 387 Gene3D G3DSA:3.40.50.2000 19 201 1.7E-16 T 13-10-2018 Thivi_2193 f902f9c5c641f114e0fa20dc2b8974c5 387 Gene3D G3DSA:3.40.50.2000 202 360 2.8E-26 T 13-10-2018 Thivi_2193 f902f9c5c641f114e0fa20dc2b8974c5 387 Pfam PF13439 Glycosyltransferase Family 4 35 184 1.6E-18 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 SUPERFAMILY SSF55781 16 175 1.74E-32 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 439 726 7.9E-94 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 SUPERFAMILY SSF51621 440 727 1.54E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Pfam PF01590 GAF domain 32 169 1.2E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 193 750 6.6E-125 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Gene3D G3DSA:1.10.274.10 210 334 4.2E-54 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Gene3D G3DSA:3.30.450.40 14 181 3.0E-48 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3622 a8da83e7796bf9883923aa0408864364 768 SMART SM00065 32 179 1.5E-24 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Pfam PF00391 PEP-utilising enzyme, mobile domain 341 412 1.3E-14 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 SUPERFAMILY SSF52009 313 430 9.03E-24 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Gene3D G3DSA:3.50.30.10 193 420 4.2E-54 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 633 651 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 SUPERFAMILY SSF47831 218 331 1.44E-24 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Gene3D G3DSA:3.20.20.60 421 758 7.5E-102 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 633 648 1.4E-22 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 686 698 1.4E-22 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 499 1.4E-22 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 650 665 1.4E-22 T 13-10-2018 Thivi_3622 a8da83e7796bf9883923aa0408864364 768 Pfam PF05524 PEP-utilising enzyme, N-terminal 193 314 9.4E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Thivi_0713 766e4779fddd3b1618ebc827038af8ce 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 109 1.7E-21 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0713 766e4779fddd3b1618ebc827038af8ce 112 Gene3D G3DSA:2.30.30.110 1 112 3.5E-42 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_0713 766e4779fddd3b1618ebc827038af8ce 112 SUPERFAMILY SSF50118 4 111 3.27E-31 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 Gene3D G3DSA:3.50.50.60 118 244 3.5E-123 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.2E-47 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 Gene3D G3DSA:3.50.50.60 10 312 3.5E-123 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.3E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 2.3E-118 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.1E-41 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.1E-41 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.1E-41 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.1E-41 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.1E-41 T 13-10-2018 Thivi_0943 6fb217dc900c10596e35c40cc62db4ca 321 SUPERFAMILY SSF51905 1 313 2.68E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1432 67c28e0d8238069308ba042ebec02c2a 370 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 227 334 9.5E-34 T 13-10-2018 IPR019236 Domain of unknown function DUF2183 Thivi_3816 8665c0e38408b2194f5a341bb3677ccd 126 Gene3D G3DSA:2.102.10.10 9 120 5.1E-10 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_3816 8665c0e38408b2194f5a341bb3677ccd 126 Pfam PF00355 Rieske [2Fe-2S] domain 9 90 1.9E-7 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Thivi_3816 8665c0e38408b2194f5a341bb3677ccd 126 SUPERFAMILY SSF50022 9 114 1.44E-15 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_2249 d27cebfbb2bdb45e44d08cedd4fea611 454 Pfam PF00501 AMP-binding enzyme 130 294 1.8E-19 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_2249 d27cebfbb2bdb45e44d08cedd4fea611 454 SUPERFAMILY SSF56801 26 446 3.27E-53 T 13-10-2018 Thivi_2249 d27cebfbb2bdb45e44d08cedd4fea611 454 Gene3D G3DSA:3.40.50.12780 12 328 1.0E-24 T 13-10-2018 Thivi_2249 d27cebfbb2bdb45e44d08cedd4fea611 454 Gene3D G3DSA:3.30.300.30 346 450 8.3E-14 T 13-10-2018 Thivi_1086 55702ed0dd4547fe715cdd3ca8bf1dd5 251 SUPERFAMILY SSF52540 2 230 1.55E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1086 55702ed0dd4547fe715cdd3ca8bf1dd5 251 Gene3D G3DSA:3.40.50.300 1 247 1.9E-58 T 13-10-2018 Thivi_1086 55702ed0dd4547fe715cdd3ca8bf1dd5 251 SMART SM00382 26 238 3.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1086 55702ed0dd4547fe715cdd3ca8bf1dd5 251 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 9.1E-106 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Thivi_1086 55702ed0dd4547fe715cdd3ca8bf1dd5 251 Pfam PF00005 ABC transporter 17 172 1.5E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 16 83 1.8E-14 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 675 743 1.9E-18 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF08447 PAS fold 699 777 2.2E-10 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF08447 PAS fold 341 406 7.7E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF08447 PAS fold 39 127 6.3E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF08447 PAS fold 169 255 2.8E-17 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 660 786 3.06E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.40.50.12740 1046 1166 2.6E-32 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00387 913 1026 7.9E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF00072 Response regulator receiver domain 1049 1158 2.8E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 285 410 4.71E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 551 674 1.6E-23 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 131 260 2.74E-24 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55874 856 1024 1.28E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 419 550 2.6E-12 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 626 663 0.47 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 370 413 3.1E-6 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 220 262 7.3E-9 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 90 134 3.1E-4 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 494 537 21.0 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00086 747 788 32.0 T 13-10-2018 IPR001610 PAC motif Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 549 615 0.0072 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 299 365 0.3 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 146 215 5.3E-8 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 675 742 2.9E-5 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 15 83 0.0032 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00091 421 488 0.0012 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 913 1025 9.6E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 137 259 7.4E-30 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 978 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 1003 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1010 1023 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 PRINTS PR00344 Bacterial sensor protein C-terminal signature 950 964 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 535 661 2.26E-22 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF52172 1045 1164 1.17E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00388 801 867 1.3E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF08448 PAS fold 555 664 4.2E-17 T 13-10-2018 IPR013656 PAS fold-4 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 20 134 1.92E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.565.10 868 1028 1.3E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF47384 791 868 2.16E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 553 670 8.7E-14 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 691 795 3.2E-8 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 268 1.4E-10 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 141 1.6E-7 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 421 544 7.5E-7 T 13-10-2018 IPR000014 PAS domain Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SMART SM00448 1047 1161 1.8E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:3.30.450.20 295 409 8.4E-22 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 SUPERFAMILY SSF55785 426 539 5.06E-11 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Pfam PF00512 His Kinase A (phospho-acceptor) domain 802 867 1.1E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:2.10.70.100 744 789 3.5E-10 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:2.10.70.100 88 134 9.1E-7 T 13-10-2018 Thivi_3000 741da593d1e0d2034c223e96b89f3153 1170 Gene3D G3DSA:1.10.287.130 790 867 1.0E-17 T 13-10-2018 Thivi_2209 2da0d21d5fb2112e1144bf3db471c567 286 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 6 57 2.3E-17 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Thivi_2209 2da0d21d5fb2112e1144bf3db471c567 286 Pfam PF00691 OmpA family 154 252 3.7E-15 T 13-10-2018 IPR006665 OmpA-like domain Thivi_2209 2da0d21d5fb2112e1144bf3db471c567 286 Gene3D G3DSA:3.30.1330.60 109 262 2.3E-43 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_2209 2da0d21d5fb2112e1144bf3db471c567 286 SUPERFAMILY SSF103088 141 258 6.54E-27 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1800 e85eae9d28a9da2cae5336dd994a22f1 105 Pfam PF14242 Domain of unknown function (DUF4342) 9 87 6.6E-29 T 13-10-2018 IPR025642 Domain of unknown function DUF4342 Thivi_2423 b737e0d9e598407e08ced4613a67d76d 176 Gene3D G3DSA:3.40.50.300 6 175 2.4E-31 T 13-10-2018 Thivi_2423 b737e0d9e598407e08ced4613a67d76d 176 SUPERFAMILY SSF52540 24 157 4.19E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2423 b737e0d9e598407e08ced4613a67d76d 176 Pfam PF01695 IstB-like ATP binding protein 25 156 5.9E-41 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Thivi_2423 b737e0d9e598407e08ced4613a67d76d 176 SMART SM00382 25 157 1.6E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0988 a96d26d7f523890440201159d7376146 827 Gene3D G3DSA:1.10.1780.10 10 152 2.5E-16 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_0988 a96d26d7f523890440201159d7376146 827 SMART SM01086 721 810 2.0E-28 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_0988 a96d26d7f523890440201159d7376146 827 Gene3D G3DSA:3.40.50.300 476 719 8.2E-90 T 13-10-2018 Thivi_0988 a96d26d7f523890440201159d7376146 827 SUPERFAMILY SSF81923 10 162 2.75E-18 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_0988 a96d26d7f523890440201159d7376146 827 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 714 3.7E-50 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 Gene3D G3DSA:1.10.8.60 721 816 1.8E-22 T 13-10-2018 Thivi_0988 a96d26d7f523890440201159d7376146 827 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 5.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 5.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 5.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 5.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 SMART SM00382 544 703 3.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0988 a96d26d7f523890440201159d7376146 827 SMART SM00382 204 350 3.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0988 a96d26d7f523890440201159d7376146 827 SUPERFAMILY SSF52540 165 474 1.59E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0988 a96d26d7f523890440201159d7376146 827 SUPERFAMILY SSF52540 493 805 2.46E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0988 a96d26d7f523890440201159d7376146 827 Gene3D G3DSA:3.40.50.300 153 350 2.4E-60 T 13-10-2018 Thivi_0988 a96d26d7f523890440201159d7376146 827 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 296 8.2E-8 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0988 a96d26d7f523890440201159d7376146 827 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 721 801 4.9E-20 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_0988 a96d26d7f523890440201159d7376146 827 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 26 56 0.22 T 13-10-2018 IPR004176 Clp, N-terminal Thivi_0988 a96d26d7f523890440201159d7376146 827 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 99 151 8.6E-9 T 13-10-2018 IPR004176 Clp, N-terminal Thivi_0988 a96d26d7f523890440201159d7376146 827 Gene3D G3DSA:3.40.50.300 351 475 1.1E-34 T 13-10-2018 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Gene3D G3DSA:1.10.420.10 650 773 2.0E-141 T 13-10-2018 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 SUPERFAMILY SSF48113 89 492 2.06E-147 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Gene3D G3DSA:1.10.420.20 255 459 5.8E-207 T 13-10-2018 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00458 Haem peroxidase superfamily signature 155 169 3.1E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00458 Haem peroxidase superfamily signature 215 232 3.1E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00458 Haem peroxidase superfamily signature 233 245 3.1E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00458 Haem peroxidase superfamily signature 378 393 3.1E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.1E-16 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Gene3D G3DSA:1.10.520.10 495 796 2.0E-141 T 13-10-2018 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Hamap MF_01961 Catalase-peroxidase [katG]. 68 798 41.521 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 326 349 2.1E-45 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 117 130 2.1E-45 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 542 568 2.1E-45 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 132 157 2.1E-45 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 91 113 2.1E-45 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Gene3D G3DSA:1.10.520.10 88 492 5.8E-207 T 13-10-2018 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Pfam PF00141 Peroxidase 141 457 2.9E-49 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 Pfam PF00141 Peroxidase 513 771 3.0E-38 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 ProSitePatterns PS00436 Peroxidases active site signature. 155 166 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 SUPERFAMILY SSF48113 492 796 1.92E-111 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 318 328 - T 13-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Thivi_4494 f96a7f3e6a6c1dff87a449b83b0ea7ba 800 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 87 798 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_3705 1547f833bf3aba7599fa1c966d00497d 293 Gene3D G3DSA:3.90.550.10 1 293 1.6E-83 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3705 1547f833bf3aba7599fa1c966d00497d 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.1E-149 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Thivi_3705 1547f833bf3aba7599fa1c966d00497d 293 Pfam PF00483 Nucleotidyl transferase 4 240 4.0E-67 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_3705 1547f833bf3aba7599fa1c966d00497d 293 SUPERFAMILY SSF53448 2 288 1.37E-91 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 8 227 30.816 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 SUPERFAMILY SSF51419 4 226 6.02E-77 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 Pfam PF01168 Alanine racemase, N-terminal domain 9 229 3.6E-30 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 Gene3D G3DSA:3.20.20.10 1 231 7.9E-86 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 PIRSF PIRSF004848 1 231 1.1E-71 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Thivi_3329 a7bbf5a6a872ef06571a26335ef77c6c 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 228 9.2E-67 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Gene3D G3DSA:1.10.730.10 468 594 6.2E-37 T 13-10-2018 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 594 2.2E-133 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 SMART SM00836 473 594 3.8E-58 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 6.6E-26 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 9.7E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 9.7E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 342 363 9.7E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 9.7E-21 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 SUPERFAMILY SSF55190 3 111 9.81E-27 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Pfam PF05746 DALR anticodon binding domain 473 594 1.6E-35 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 594 26.317 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 SUPERFAMILY SSF52374 114 484 2.95E-85 T 13-10-2018 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Gene3D G3DSA:3.30.1360.70 1 108 1.3E-26 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Pfam PF00750 tRNA synthetases class I (R) 307 436 1.9E-10 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 Pfam PF00750 tRNA synthetases class I (R) 100 178 4.0E-10 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 SMART SM01016 3 91 4.3E-40 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3794 62aaf330e5b2996c65189a0329a3d9ed 594 SUPERFAMILY SSF47323 467 594 2.42E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0507 1ae46af69e749f7bcd28478ea10b07f7 497 Pfam PF01943 Polysaccharide biosynthesis protein 10 285 5.3E-6 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Thivi_0507 1ae46af69e749f7bcd28478ea10b07f7 497 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 351 481 2.6E-10 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Thivi_2137 5eb45d7d6506b54f7a73c1bfa65f3844 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 73 94 2.7E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2137 5eb45d7d6506b54f7a73c1bfa65f3844 223 Gene3D G3DSA:3.30.700.10 76 220 3.4E-13 T 13-10-2018 Thivi_2137 5eb45d7d6506b54f7a73c1bfa65f3844 223 Pfam PF12019 Type II transport protein GspH 111 217 1.5E-10 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Thivi_2137 5eb45d7d6506b54f7a73c1bfa65f3844 223 Pfam PF07963 Prokaryotic N-terminal methylation motif 73 93 8.0E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2137 5eb45d7d6506b54f7a73c1bfa65f3844 223 SUPERFAMILY SSF54523 76 188 5.26E-14 T 13-10-2018 Thivi_3707 50c4e1fbb9af5276bfe6c2b5284c66e3 303 Gene3D G3DSA:3.90.25.10 173 296 5.0E-103 T 13-10-2018 Thivi_3707 50c4e1fbb9af5276bfe6c2b5284c66e3 303 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 12 301 3.3E-92 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Thivi_3707 50c4e1fbb9af5276bfe6c2b5284c66e3 303 Pfam PF04321 RmlD substrate binding domain 12 302 8.3E-100 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Thivi_3707 50c4e1fbb9af5276bfe6c2b5284c66e3 303 Gene3D G3DSA:3.40.50.720 14 289 5.0E-103 T 13-10-2018 Thivi_3707 50c4e1fbb9af5276bfe6c2b5284c66e3 303 SUPERFAMILY SSF51735 12 302 1.06E-95 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.70.1430 51 825 9.4E-223 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82866 815 1035 2.09E-38 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82714 730 808 6.54E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82714 196 290 1.12E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82693 147 347 1.57E-13 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82866 323 512 5.89E-35 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:1.20.1640.10 24 529 9.4E-223 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.2090.10 190 292 9.4E-223 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.70.1320 147 350 9.4E-223 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.70.1430 578 677 9.4E-223 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 SUPERFAMILY SSF82693 51 146 4.97E-15 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.70.1440 678 876 9.4E-223 T 13-10-2018 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Pfam PF00873 AcrB/AcrD/AcrF family 15 1030 1.1E-139 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 380 401 6.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 486 509 6.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 6.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 408 432 6.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 6.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:3.30.2090.10 729 817 9.4E-223 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4364 fc9c253fb4189dede918a44648b055f1 1049 Gene3D G3DSA:1.20.1640.10 530 1028 9.4E-223 T 13-10-2018 Thivi_1653 8e94804d2b29963d557e3e01119a0fcc 454 SMART SM00382 30 453 0.0012 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1653 8e94804d2b29963d557e3e01119a0fcc 454 SUPERFAMILY SSF52540 18 449 1.78E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1653 8e94804d2b29963d557e3e01119a0fcc 454 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 357 439 3.1E-14 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Pfam PF13649 Methyltransferase domain 519 614 2.6E-14 T 13-10-2018 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Pfam PF13432 Tetratricopeptide repeat 168 229 5.6E-9 T 13-10-2018 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Pfam PF13432 Tetratricopeptide repeat 101 163 1.5E-8 T 13-10-2018 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SMART SM00028 197 230 3.7E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SMART SM00028 129 162 7.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SMART SM00028 163 196 1.9E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SMART SM00028 95 128 0.19 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SMART SM00028 61 94 0.0061 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Gene3D G3DSA:3.40.50.150 506 680 1.0E-24 T 13-10-2018 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Gene3D G3DSA:1.25.40.10 146 264 1.1E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SUPERFAMILY SSF48452 58 232 1.19E-43 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 SUPERFAMILY SSF53335 512 708 5.22E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Gene3D G3DSA:1.25.40.10 7 145 8.6E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0877 1d957b6ce15c5679b27c78568353dfce 759 Pfam PF07721 Tetratricopeptide repeat 66 86 0.12 T 13-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Pfam PF02780 Transketolase, C-terminal domain 548 659 3.0E-13 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Gene3D G3DSA:3.40.50.970 333 544 9.0E-82 T 13-10-2018 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 SUPERFAMILY SSF52922 539 668 1.86E-41 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 SUPERFAMILY SSF52518 5 335 3.75E-120 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 340 4.9E-165 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 SUPERFAMILY SSF52518 342 532 1.28E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 SMART SM00861 361 532 1.5E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Gene3D G3DSA:3.40.50.970 1 332 1.2E-132 T 13-10-2018 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Pfam PF02779 Transketolase, pyrimidine binding domain 360 532 1.7E-45 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 ProSitePatterns PS00802 Transketolase signature 2. 474 490 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 Gene3D G3DSA:3.40.50.920 545 665 3.4E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_2348 4b525e6376bd196ca11ead23d733dd48 668 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 667 0.0 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 284 4.0E-72 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 Gene3D G3DSA:1.10.8.10 9 93 7.2E-23 T 13-10-2018 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 32 281 5.1E-86 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 Gene3D G3DSA:3.40.50.150 94 284 7.9E-58 T 13-10-2018 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 Pfam PF05175 Methyltransferase small domain 112 197 1.1E-13 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 285 43.861 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 SUPERFAMILY SSF53335 10 282 6.07E-56 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4172 ca2771dad1322f1a0c5a3dd766ac6433 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 190 196 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 436 447 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Gene3D G3DSA:1.10.1060.10 384 463 4.6E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Pfam PF10531 SLBB domain 315 362 1.1E-10 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Pfam PF13183 4Fe-4S dicluster domain 394 450 4.4E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Pfam PF13375 RnfC Barrel sandwich hybrid domain 33 127 2.4E-26 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 157 300 5.6E-45 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Gene3D G3DSA:3.40.50.11540 162 305 4.3E-12 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 468 130.606 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 SUPERFAMILY SSF46548 353 465 3.66E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 SUPERFAMILY SSF142019 141 320 1.16E-49 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3181 a29ba7b0a57f7ed467d47e235e3a523e 468 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 33 464 6.4E-146 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 Pfam PF01274 Malate synthase 18 686 3.7E-153 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 Gene3D G3DSA:1.20.1220.12 586 730 7.7E-68 T 13-10-2018 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 Gene3D G3DSA:3.20.20.360 8 582 1.1E-262 T 13-10-2018 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 Gene3D G3DSA:2.170.170.11 135 264 1.1E-262 T 13-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 722 0.0 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 Hamap MF_00641 Malate synthase G [glcB]. 1 730 370.368 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Thivi_2151 b9bb73620b22b13c329976a57e6045a6 730 SUPERFAMILY SSF51645 3 722 6.28E-289 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Pfam PF13426 PAS domain 529 630 2.0E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Gene3D G3DSA:3.30.450.20 35 127 1.1E-101 T 13-10-2018 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 SUPERFAMILY SSF55781 132 318 6.76E-58 T 13-10-2018 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 SMART SM00065 146 320 3.6E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 SUPERFAMILY SSF55785 526 634 4.06E-10 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Gene3D G3DSA:3.30.450.40 17 307 1.1E-101 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Pfam PF08446 PAS fold 19 124 3.7E-14 T 13-10-2018 IPR013654 PAS fold-2 GO:0006355 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 SUPERFAMILY SSF55781 322 505 1.57E-48 T 13-10-2018 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Gene3D G3DSA:3.30.450.270 315 511 6.1E-58 T 13-10-2018 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Pfam PF01590 GAF domain 148 311 9.3E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 SUPERFAMILY SSF55785 7 124 3.18E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Gene3D G3DSA:3.30.450.20 512 635 4.3E-15 T 13-10-2018 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 161 180 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 431 450 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 346 366 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 546 562 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 248 269 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 PRINTS PR01033 Phytochrome signature 465 483 7.8E-20 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2359 c0c6743f374f735b6f500a983ae480f8 720 Pfam PF00360 Phytochrome region 326 505 2.2E-53 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 Gene3D G3DSA:1.10.287.950 340 638 4.0E-43 T 13-10-2018 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 Gene3D G3DSA:1.10.287.950 10 339 1.9E-54 T 13-10-2018 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 144 294 2.4E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 447 595 1.0E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 SMART SM00283 368 636 9.1E-29 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 SMART SM00283 68 329 2.2E-45 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 SUPERFAMILY SSF58104 355 636 4.62E-44 T 13-10-2018 Thivi_0321 a89254a94310f5ece4b320d478f1ee97 638 SUPERFAMILY SSF58104 51 339 1.96E-51 T 13-10-2018 Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 Pfam PF00106 short chain dehydrogenase 4 194 2.2E-59 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 SUPERFAMILY SSF51735 3 245 2.52E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.7E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 7.3E-5 T 13-10-2018 Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 5.4E-121 T 13-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 Gene3D G3DSA:3.40.50.720 2 245 6.3E-78 T 13-10-2018 Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3435 1e1ebc40c610ea9cd859dc386c86c98b 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.3E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 Gene3D G3DSA:1.10.15.40 33 81 4.4E-6 T 13-10-2018 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 SUPERFAMILY SSF54862 35 168 4.57E-28 T 13-10-2018 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 Gene3D G3DSA:3.30.70.20 82 167 1.6E-18 T 13-10-2018 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 172 3.9E-63 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 161 23.192 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 Pfam PF14697 4Fe-4S dicluster domain 102 156 2.2E-15 T 13-10-2018 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 Pfam PF04060 Putative Fe-S cluster 41 72 1.4E-11 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 Thivi_3395 5706c1f1869ad4008d7873c5e1c5ac64 176 PIRSF PIRSF005784 1 175 1.9E-64 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Thivi_2617 4b873a88b5ff40251beca6818a6bc403 189 Gene3D G3DSA:3.10.290.30 1 180 1.7E-67 T 13-10-2018 IPR024047 MM3350-like superfamily Thivi_2617 4b873a88b5ff40251beca6818a6bc403 189 SUPERFAMILY SSF159941 6 179 2.75E-65 T 13-10-2018 IPR024047 MM3350-like superfamily Thivi_2617 4b873a88b5ff40251beca6818a6bc403 189 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 7 177 4.6E-66 T 13-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Gene3D G3DSA:1.10.260.30 328 450 6.7E-43 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Gene3D G3DSA:3.40.50.300 90 285 7.4E-126 T 13-10-2018 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 SUPERFAMILY SSF47446 298 431 9.81E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 SUPERFAMILY SSF52540 42 352 6.95E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.6E-22 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 SMART SM00382 99 247 3.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 SMART SM00963 1 86 4.2E-36 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Pfam PF02978 Signal peptide binding domain 329 427 6.8E-32 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Gene3D G3DSA:1.20.120.140 4 305 7.4E-126 T 13-10-2018 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.8E-179 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.37 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.7E-75 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_1917 7f942a04a2f286751aaa469ffd598e63 468 SMART SM00962 100 296 2.3E-119 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 4.4E-99 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 SUPERFAMILY SSF55979 125 244 4.24E-29 T 13-10-2018 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 SMART SM00480 17 362 2.2E-124 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.3E-33 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 SUPERFAMILY SSF55979 1 118 6.65E-24 T 13-10-2018 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 Gene3D G3DSA:3.10.150.10 1 242 2.6E-110 T 13-10-2018 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 Gene3D G3DSA:3.70.10.10 137 364 2.6E-110 T 13-10-2018 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 2.1E-31 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 PIRSF PIRSF000804 1 366 5.2E-112 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 SUPERFAMILY SSF55979 245 366 3.37E-34 T 13-10-2018 Thivi_2842 1b55d6e0bfe6290d28ba5ad41ef340eb 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 2.0E-30 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 SMART SM00304 195 249 5.3E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 278 307 6.0E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 420 6.0E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 SMART SM00283 264 525 2.3E-78 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 Gene3D G3DSA:3.30.450.20 17 172 3.4E-49 T 13-10-2018 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 Pfam PF17200 Single Cache domain 2 21 170 4.9E-39 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 311 492 8.1E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 SUPERFAMILY SSF58104 217 526 7.72E-78 T 13-10-2018 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 Gene3D G3DSA:1.10.287.950 195 527 1.2E-75 T 13-10-2018 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 SMART SM01049 18 112 6.1E-30 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_2566 5f53130beb9e2ba213cf97dd4756ab4c 556 Pfam PF00672 HAMP domain 195 243 6.3E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.0E-83 T 13-10-2018 Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 PIRSF PIRSF000094 1 258 3.1E-112 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 2.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 2.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 Gene3D G3DSA:3.40.50.720 1 256 5.6E-57 T 13-10-2018 Thivi_0899 31e4f095ce6967ea22546a0cdc501fd5 258 SUPERFAMILY SSF51735 5 254 3.87E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 SUPERFAMILY SSF64518 5 262 3.27E-60 T 13-10-2018 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 PRINTS PR00207 Flagellin signature 35 52 1.4E-15 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 PRINTS PR00207 Flagellin signature 109 132 1.4E-15 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 PRINTS PR00207 Flagellin signature 74 93 1.4E-15 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Pfam PF00700 Bacterial flagellin C-terminal helical region 186 264 4.4E-15 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 136 9.1E-30 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Gene3D G3DSA:1.20.58.1830 6 31 1.5E-44 T 13-10-2018 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Gene3D G3DSA:1.20.58.1830 236 264 3.2E-23 T 13-10-2018 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Gene3D G3DSA:1.20.1330.10 179 230 3.2E-23 T 13-10-2018 Thivi_3150 c62e2fa1c1809ac6e63b0ae56df43830 272 Gene3D G3DSA:1.20.1330.10 43 164 1.5E-44 T 13-10-2018 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 SUPERFAMILY SSF52172 9 137 1.57E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 Gene3D G3DSA:3.40.50.12740 8 215 3.6E-64 T 13-10-2018 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 6.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 6.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 6.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 SMART SM00421 154 211 8.1E-27 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 1.8E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 SMART SM00448 7 121 8.7E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 Pfam PF00072 Response regulator receiver domain 9 121 7.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_4249 232c5298f0ccf499187b1e0a7ba06a93 217 SUPERFAMILY SSF46894 148 213 3.33E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_1887 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1887 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_0077 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0077 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_1241 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1241 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_3021 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3021 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_3119 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3119 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_1447 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1447 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_4300 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4300 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_1674 7caf41e2707cdef927958e5293ababb2 468 SUPERFAMILY SSF53098 74 410 3.72E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1674 7caf41e2707cdef927958e5293ababb2 468 Pfam PF13546 DDE superfamily endonuclease 39 305 4.5E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 119 779 1.9E-176 T 13-10-2018 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Pfam PF00905 Penicillin binding protein transpeptidase domain 479 739 9.8E-32 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 SUPERFAMILY SSF53955 97 307 1.88E-72 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Gene3D G3DSA:3.40.710.10 299 391 6.5E-7 T 13-10-2018 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Pfam PF00912 Transglycosylase 109 283 3.9E-59 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Pfam PF17092 Penicillin-binding protein OB-like domain 370 477 1.1E-18 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Gene3D G3DSA:1.10.3810.10 103 298 1.1E-71 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 SUPERFAMILY SSF56601 265 805 1.18E-116 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_0691 d517ff34508e398b26e5bf2c3e7ffb1f 855 Gene3D G3DSA:3.40.710.10 460 826 1.8E-102 T 13-10-2018 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 71 16.07 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 PIRSF PIRSF006488 1 81 3.3E-24 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 12 52 2.0E-9 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 65 2.2E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 Gene3D G3DSA:1.10.287.1040 5 80 1.0E-25 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 SUPERFAMILY SSF116842 7 70 4.32E-20 T 13-10-2018 Thivi_4009 e1ddb38f016bbe41a492f6eea78a9dcc 81 Pfam PF02609 Exonuclease VII small subunit 12 62 4.0E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 Gene3D G3DSA:1.20.5.250 4 48 4.0E-21 T 13-10-2018 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 Pfam PF00556 Antenna complex alpha/beta subunit 13 48 4.2E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 PIRSF PIRSF002900 1 48 1.2E-16 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 PRINTS PR00674 Light harvesting protein B chain signature 10 30 1.2E-7 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 PRINTS PR00674 Light harvesting protein B chain signature 30 47 1.2E-7 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 15 46 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1983 d63661081e507751db2c67ae5f85af6c 48 SUPERFAMILY SSF56918 3 48 1.65E-12 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_3313 4911a8914a05e0d940116ef2a02bc0f1 217 Gene3D G3DSA:3.40.50.2020 12 180 1.3E-39 T 13-10-2018 Thivi_3313 4911a8914a05e0d940116ef2a02bc0f1 217 SUPERFAMILY SSF53271 16 172 1.28E-33 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_3313 4911a8914a05e0d940116ef2a02bc0f1 217 Pfam PF00156 Phosphoribosyl transferase domain 25 151 4.9E-14 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 107 14.759 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 Pfam PF02416 mttA/Hcf106 family 4 34 1.1E-7 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.0E-20 T 13-10-2018 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-20 T 13-10-2018 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-20 T 13-10-2018 Thivi_0087 150fac2f607abb29619dc07567b2c4f6 107 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 1.5E-22 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Pfam PF03144 Elongation factor Tu domain 2 319 387 1.0E-11 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Gene3D G3DSA:3.40.50.300 3 290 4.2E-92 T 13-10-2018 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SUPERFAMILY SSF54980 604 682 4.68E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Pfam PF00009 Elongation factor Tu GTP binding domain 9 276 2.0E-57 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SUPERFAMILY SSF52540 7 276 2.7E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Pfam PF03764 Elongation factor G, domain IV 507 601 2.3E-7 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Gene3D G3DSA:2.40.30.10 292 400 5.7E-24 T 13-10-2018 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 160 7.5E-26 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SMART SM00838 604 682 1.3E-17 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Gene3D G3DSA:3.30.70.240 608 678 1.5E-40 T 13-10-2018 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Pfam PF14492 Elongation Factor G, domain II 403 473 2.0E-26 T 13-10-2018 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Pfam PF00679 Elongation factor G C-terminus 605 682 1.9E-19 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SUPERFAMILY SSF54980 402 477 4.32E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SUPERFAMILY SSF54211 475 603 9.86E-11 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SMART SM00889 476 602 1.2E-4 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Gene3D G3DSA:3.30.230.10 507 681 1.5E-40 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2971 99bffab583512cff59960441cd4e2dee 683 Gene3D G3DSA:3.30.70.870 402 476 2.1E-25 T 13-10-2018 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.5E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2971 99bffab583512cff59960441cd4e2dee 683 SUPERFAMILY SSF50447 245 397 2.65E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Gene3D G3DSA:3.20.20.450 1028 1272 8.1E-69 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Pfam PF00563 EAL domain 1030 1265 5.9E-49 T 13-10-2018 IPR001633 EAL domain Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 850 1008 2.2E-14 T 13-10-2018 IPR000160 GGDEF domain Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 SUPERFAMILY SSF55073 854 1012 2.98E-25 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Pfam PF07238 PilZ domain 10 112 3.1E-6 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 SMART SM00052 1022 1270 3.5E-54 T 13-10-2018 IPR001633 EAL domain Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Gene3D G3DSA:3.30.70.270 842 1016 1.5E-30 T 13-10-2018 Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Gene3D G3DSA:2.40.10.220 6 126 1.3E-11 T 13-10-2018 Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 SMART SM00267 838 1010 8.0E-25 T 13-10-2018 IPR000160 GGDEF domain Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 SUPERFAMILY SSF141371 8 112 3.57E-10 T 13-10-2018 Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Pfam PF07793 Protein of unknown function (DUF1631) 137 839 3.7E-68 T 13-10-2018 IPR012434 Protein of unknown function DUF1631 Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 SUPERFAMILY SSF141868 1033 1270 8.24E-62 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1323 3807b22bcf101a1fa74ff56965dede43 1272 Pfam PF00990 Diguanylate cyclase, GGDEF domain 851 1005 9.6E-22 T 13-10-2018 IPR000160 GGDEF domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF13426 PAS domain 385 488 1.6E-14 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:3.30.450.20 241 373 3.4E-21 T 13-10-2018 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00388 527 592 3.4E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 752 2.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF55785 237 339 2.09E-15 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF47384 513 593 8.83E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:3.40.50.2300 779 922 5.0E-41 T 13-10-2018 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF13493 Domain of unknown function (DUF4118) 18 122 1.5E-18 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 496 4.4E-22 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 247 1.3E-16 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 249 374 9.3E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:1.10.287.130 493 590 5.4E-29 T 13-10-2018 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:3.30.565.10 593 756 1.9E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF55785 116 239 1.19E-22 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:1.20.120.620 14 121 8.4E-9 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF08448 PAS fold 135 242 2.1E-18 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00448 781 894 1.6E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF13188 PAS domain 253 322 4.2E-6 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF47226 877 1032 5.36E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 PRINTS PR00344 Bacterial sensor protein C-terminal signature 714 732 2.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 693 2.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 707 2.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 PRINTS PR00344 Bacterial sensor protein C-terminal signature 738 751 2.2E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF01627 Hpt domain 952 1034 2.1E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00073 942 1037 0.0013 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF00072 Response regulator receiver domain 783 894 2.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF55785 382 489 1.69E-28 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00387 638 754 2.6E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00086 199 241 5.3E-4 T 13-10-2018 IPR001610 PAC motif Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00086 447 489 4.5E-8 T 13-10-2018 IPR001610 PAC motif Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:1.20.120.160 930 1042 7.4E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00091 253 327 1.6 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00091 375 441 1.9E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SMART SM00091 126 192 8.0E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF52172 781 908 2.85E-40 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 SUPERFAMILY SSF55874 581 749 1.07E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 591 1.9E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:3.30.450.20 123 239 1.2E-22 T 13-10-2018 Thivi_1831 cf2683488ef9b1a41eb95bead777a4bd 1115 Gene3D G3DSA:3.30.450.20 374 491 1.9E-33 T 13-10-2018 Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SUPERFAMILY SSF52172 14 136 3.13E-10 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SMART SM00052 433 673 6.3E-10 T 13-10-2018 IPR001633 EAL domain Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 Pfam PF00563 EAL domain 439 668 7.0E-30 T 13-10-2018 IPR001633 EAL domain Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 Gene3D G3DSA:3.40.50.2300 12 138 3.9E-9 T 13-10-2018 Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 Gene3D G3DSA:3.20.20.450 435 674 1.3E-32 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 Pfam PF00072 Response regulator receiver domain 141 253 4.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SMART SM00448 139 252 1.2E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SMART SM00448 13 127 0.057 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SUPERFAMILY SSF52172 139 263 2.42E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 SUPERFAMILY SSF141868 440 671 2.09E-30 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3352 3cdb361db0e598d6f5a3c523fddb0ae6 679 Gene3D G3DSA:3.40.50.12740 139 345 1.1E-34 T 13-10-2018 Thivi_2092 13924cf66ee2e4dadc7ed6c3649bb091 441 Gene3D G3DSA:3.40.50.2300 44 377 6.4E-132 T 13-10-2018 Thivi_2092 13924cf66ee2e4dadc7ed6c3649bb091 441 Gene3D G3DSA:3.40.50.2300 157 396 6.4E-132 T 13-10-2018 Thivi_2092 13924cf66ee2e4dadc7ed6c3649bb091 441 Pfam PF13433 Periplasmic binding protein domain 42 409 2.2E-171 T 13-10-2018 Thivi_2092 13924cf66ee2e4dadc7ed6c3649bb091 441 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 42 406 8.9E-174 T 13-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like Thivi_2092 13924cf66ee2e4dadc7ed6c3649bb091 441 SUPERFAMILY SSF53822 41 411 1.24E-89 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Pfam PF00128 Alpha amylase, catalytic domain 180 278 2.0E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Pfam PF00128 Alpha amylase, catalytic domain 317 533 4.1E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Gene3D G3DSA:2.60.40.1180 593 695 2.4E-15 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Gene3D G3DSA:3.20.20.80 140 587 1.7E-182 T 13-10-2018 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 SUPERFAMILY SSF51011 594 695 3.45E-17 T 13-10-2018 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 SUPERFAMILY SSF51445 140 580 3.37E-129 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 SMART SM00642 162 573 2.5E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 110 2.2E-10 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 13 690 2.9E-207 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 Gene3D G3DSA:2.60.40.10 1 139 8.6E-30 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_1749 1cd4081aa35bcc880373700aefc2665e 698 SUPERFAMILY SSF81296 12 150 7.84E-26 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 SUPERFAMILY SSF55604 511 583 6.02E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 523 540 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 484 569 5.2E-18 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 Pfam PF00367 phosphotransferase system, EIIB 622 656 3.4E-7 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 Pfam PF00367 phosphotransferase system, EIIB 512 545 1.9E-10 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 Pfam PF02378 Phosphotransferase system, EIIC 18 426 1.3E-74 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 SUPERFAMILY SSF55604 621 694 2.22E-10 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 Gene3D G3DSA:3.30.1360.60 617 696 1.3E-13 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Thivi_0263 bfa71f6ba86fbb73a0357c1f5ed17faa 697 Gene3D G3DSA:3.30.1360.60 507 586 1.6E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 73 205 1.5E-18 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 Gene3D G3DSA:3.30.460.80 103 171 9.2E-7 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 Pfam PF00374 Nickel-dependent hydrogenase 265 331 7.6E-8 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 Gene3D G3DSA:1.10.645.20 228 582 3.2E-102 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 SUPERFAMILY SSF143243 72 241 2.88E-22 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 340 507 1.1E-30 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 SUPERFAMILY SSF56762 237 582 8.9E-91 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2909 6f9c185c6fcade9a1a939167cf9ebb49 583 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 143 204 8.0E-10 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4326 bee99c3b04e9cb7a186741528ee5d5a5 160 Pfam PF03734 L,D-transpeptidase catalytic domain 4 158 5.5E-17 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_4326 bee99c3b04e9cb7a186741528ee5d5a5 160 Gene3D G3DSA:2.40.440.10 1 160 2.6E-28 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4326 bee99c3b04e9cb7a186741528ee5d5a5 160 SUPERFAMILY SSF141523 3 159 5.23E-26 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 411 2.1E-6 T 13-10-2018 IPR000160 GGDEF domain Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 SUPERFAMILY SSF55073 282 413 2.35E-9 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Gene3D G3DSA:3.30.70.270 274 416 1.3E-9 T 13-10-2018 Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Gene3D G3DSA:3.30.450.20 130 258 9.1E-10 T 13-10-2018 Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 SMART SM00052 445 690 5.7E-26 T 13-10-2018 IPR001633 EAL domain Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 SUPERFAMILY SSF141868 452 689 7.59E-48 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 SUPERFAMILY SSF55785 133 245 4.89E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 SMART SM00091 146 212 0.0032 T 13-10-2018 IPR000014 PAS domain Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Gene3D G3DSA:3.20.20.450 448 693 1.0E-53 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Pfam PF13188 PAS domain 149 207 1.1E-4 T 13-10-2018 IPR000014 PAS domain Thivi_0220 bf7195b042379c117ca2b70613e3ec36 693 Pfam PF00563 EAL domain 452 685 7.3E-43 T 13-10-2018 IPR001633 EAL domain Thivi_0557 03d3c1492872166a3e8b98d942af99a9 263 SUPERFAMILY SSF54106 214 263 2.22E-5 T 13-10-2018 Thivi_0557 03d3c1492872166a3e8b98d942af99a9 263 Gene3D G3DSA:3.10.350.10 206 263 4.6E-7 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_0557 03d3c1492872166a3e8b98d942af99a9 263 Pfam PF01476 LysM domain 215 263 3.2E-7 T 13-10-2018 IPR018392 LysM domain Thivi_0557 03d3c1492872166a3e8b98d942af99a9 263 Gene3D G3DSA:1.20.5.340 57 154 1.3E-5 T 13-10-2018 Thivi_0557 03d3c1492872166a3e8b98d942af99a9 263 SMART SM00257 214 263 0.0017 T 13-10-2018 IPR018392 LysM domain Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 Gene3D G3DSA:1.10.1130.10 52 310 7.1E-85 T 13-10-2018 Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 SUPERFAMILY SSF48695 60 500 9.47E-94 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 TIGRFAM TIGR04315 octaheme_Shew: octaheme c-type cytochrome, tetrathionate reductase family 51 506 2.0E-183 T 13-10-2018 IPR024673 Octaheme c-type cytochrome Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 PIRSF PIRSF039014 6 543 3.6E-155 T 13-10-2018 IPR024673 Octaheme c-type cytochrome Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 Pfam PF13435 Cytochrome c554 and c-prime 72 151 0.031 T 13-10-2018 IPR023155 Cytochrome c-552/4 Thivi_0700 51ec9a96a42df586d8c44a58701ed968 547 Pfam PF11783 Cytochrome c bacterial 321 495 4.0E-60 T 13-10-2018 IPR024673 Octaheme c-type cytochrome Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 155 1.2E-34 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 Pfam PF00994 Probable molybdopterin binding domain 17 157 1.1E-32 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 SMART SM00852 16 160 8.0E-32 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 Gene3D G3DSA:3.40.980.10 5 173 1.1E-49 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 170 1.2E-82 T 13-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 PIRSF PIRSF006443 1 168 2.4E-63 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Thivi_2588 7af9fdaecf4752bda9f249110424dd94 176 SUPERFAMILY SSF53218 9 168 1.18E-44 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_1254 541b1eb6aaa992ea0ba531885b71835f 197 Gene3D G3DSA:3.90.1570.10 4 177 1.4E-33 T 13-10-2018 Thivi_1254 541b1eb6aaa992ea0ba531885b71835f 197 SUPERFAMILY SSF52980 8 161 1.45E-38 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_1254 541b1eb6aaa992ea0ba531885b71835f 197 Pfam PF05685 Putative restriction endonuclease 14 166 8.3E-35 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_4518 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4518 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4518 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4518 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2804 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2804 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2804 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2804 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1505 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1505 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1505 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1505 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2225 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2225 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2225 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2225 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2555 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2555 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2555 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2555 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2844 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2844 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2844 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2844 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3356 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3356 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3356 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3356 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2675 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2675 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2675 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2675 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2058 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2058 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2058 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2058 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3408 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3408 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3408 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3408 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0454 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0454 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0454 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0454 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3817 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3817 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3817 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3817 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2383 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2383 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2383 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2383 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4458 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4458 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4458 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4458 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1102 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1102 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1102 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1102 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3763 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3763 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3763 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3763 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2136 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1618 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1618 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1618 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1618 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4136 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4136 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3260 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3260 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3260 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3260 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2175 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2175 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2175 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2175 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1471 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1471 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1471 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1471 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0685 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0685 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0685 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0685 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0378 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0378 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0378 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0378 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3017 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3017 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3017 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3017 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4565 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4565 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4565 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4565 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2954 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2954 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2954 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2954 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1615 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1615 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1615 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1615 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2955 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2955 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2955 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2955 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2933 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2933 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2933 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2933 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3244 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3244 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3244 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3244 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3074 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3074 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3074 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3074 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3033 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3033 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3033 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3033 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0234 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0234 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0234 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0234 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1862 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1862 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1862 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1862 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4524 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4524 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4524 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4524 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1012 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1012 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1012 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1012 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1511 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1511 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1511 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1511 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0855 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0855 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0855 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0855 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0406 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0406 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0406 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0406 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2118 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2118 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2118 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2118 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1455 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1455 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1455 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1455 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2467 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2467 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2467 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2467 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1384 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1384 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1384 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1384 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0421 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0421 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0421 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0421 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1457 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1457 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1457 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1457 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0816 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0816 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0816 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0816 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1382 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1382 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1382 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1382 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0639 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0639 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0639 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0639 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3444 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3444 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3444 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3444 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0493 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0493 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0493 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0493 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0783 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0783 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0783 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0783 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1772 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1772 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1772 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1772 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3482 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3482 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3482 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3482 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1290 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1290 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1290 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_1290 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3293 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3293 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3293 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3293 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4266 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4266 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4266 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4266 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3667 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3667 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3667 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3667 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2612 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2612 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2612 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2612 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3873 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3873 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3873 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3873 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2657 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2657 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2657 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2657 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3298 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3298 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3298 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3298 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2262 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2262 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2262 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2262 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3236 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3236 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3236 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3236 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2884 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2884 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2884 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2884 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2944 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2944 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2944 afe29ee7ee86cd311e3458483264f98a 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2944 afe29ee7ee86cd311e3458483264f98a 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 Gene3D G3DSA:1.20.1560.10 4 320 2.8E-38 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 Gene3D G3DSA:3.40.50.300 330 570 9.2E-77 T 13-10-2018 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 534 2.2E-141 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 Pfam PF00005 ABC transporter 357 503 1.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 SUPERFAMILY SSF52540 330 558 1.9E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 SUPERFAMILY SSF90123 6 326 7.98E-46 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 SMART SM00382 364 550 5.0E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4311 9a6d566e284e0bc2976bcfce792b9bf2 579 Pfam PF00664 ABC transporter transmembrane region 23 287 3.8E-12 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 SUPERFAMILY SSF56770 48 307 5.36E-80 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 Gene3D G3DSA:4.10.480.10 227 338 1.7E-39 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 205 4.2E-28 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 225 305 3.1E-32 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 311 1.6E-125 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 186 209 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 230 248 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 282 295 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 212 229 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 254 280 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 157 181 5.8E-72 T 13-10-2018 Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 Gene3D G3DSA:3.40.50.700 46 224 3.0E-62 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_1306 0916ab19fad27ff0f2fcf9089b2c0b85 354 PIRSF PIRSF000310 5 353 3.1E-130 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 Gene3D G3DSA:3.40.50.300 223 395 7.5E-35 T 13-10-2018 Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 Gene3D G3DSA:1.10.8.60 396 457 6.9E-8 T 13-10-2018 Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 SUPERFAMILY SSF52540 232 445 4.37E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 SUPERFAMILY SSF52540 77 211 4.11E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 SMART SM00382 263 396 2.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3091 844c4bebf8d74415ba664d1e50a51ee4 496 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 267 393 5.9E-26 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Pfam PF13188 PAS domain 177 226 0.041 T 13-10-2018 IPR000014 PAS domain Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 2.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 2.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 2.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SUPERFAMILY SSF55785 57 163 1.13E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Pfam PF00989 PAS fold 54 162 1.4E-18 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SUPERFAMILY SSF55785 161 272 1.62E-10 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Gene3D G3DSA:3.30.450.20 51 173 7.1E-30 T 13-10-2018 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SMART SM00091 51 117 7.4E-8 T 13-10-2018 IPR000014 PAS domain Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SMART SM00091 177 239 3.1 T 13-10-2018 IPR000014 PAS domain Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Gene3D G3DSA:3.30.565.10 390 543 5.9E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 52 172 3.9E-21 T 13-10-2018 IPR000014 PAS domain Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 539 4.3E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 TIGRFAM TIGR02938 nifL_nitrog: nitrogen fixation negative regulator NifL 48 539 1.3E-162 T 13-10-2018 IPR014285 Nitrogen fixation negative regulator NifL GO:0007165|GO:0009399 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 Gene3D G3DSA:3.30.450.20 174 312 2.6E-14 T 13-10-2018 Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SMART SM00387 430 543 9.9E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3393 b30c5f82800a0e0625eb7473e4590e9d 546 SUPERFAMILY SSF55874 392 539 1.17E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 290 6.0E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 SUPERFAMILY SSF55874 280 434 7.73E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 SMART SM00388 225 290 2.1E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.6E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 437 1.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 Gene3D G3DSA:1.10.287.130 176 290 3.4E-21 T 13-10-2018 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 SUPERFAMILY SSF47384 208 291 2.94E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 SMART SM00387 337 449 5.3E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 Gene3D G3DSA:3.30.565.10 297 447 5.5E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4463 e3ab958bb799c23a0dd77f24e3513a5d 474 Pfam PF08521 Two-component sensor kinase N-terminal 18 145 1.4E-5 T 13-10-2018 IPR013727 Two-component sensor kinase, N-terminal Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 548 677 1.0E-10 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 296 2.0E-20 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 298 420 1.6E-13 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 423 547 2.5E-18 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF08448 PAS fold 181 291 7.8E-12 T 13-10-2018 IPR013656 PAS fold-4 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF13426 PAS domain 440 539 6.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55073 687 852 1.02E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00052 860 1106 3.0E-120 T 13-10-2018 IPR001633 EAL domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF08447 PAS fold 576 657 7.4E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF08447 PAS fold 325 408 2.5E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF00563 EAL domain 866 1101 3.1E-76 T 13-10-2018 IPR001633 EAL domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55785 158 281 5.06E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00267 671 850 1.4E-60 T 13-10-2018 IPR000160 GGDEF domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF141868 866 1108 8.76E-91 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55781 25 168 1.06E-9 T 13-10-2018 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00086 373 415 1.9E-8 T 13-10-2018 IPR001610 PAC motif Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00086 247 289 2.1 T 13-10-2018 IPR001610 PAC motif Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00086 499 540 3.6 T 13-10-2018 IPR001610 PAC motif Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00086 629 671 0.0026 T 13-10-2018 IPR001610 PAC motif Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.450.20 177 300 2.0E-22 T 13-10-2018 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55785 419 538 3.32E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.450.20 544 668 1.3E-19 T 13-10-2018 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.450.40 2 172 3.7E-5 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55785 286 413 1.74E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Pfam PF00990 Diguanylate cyclase, GGDEF domain 682 846 2.5E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.20.20.450 863 1113 4.5E-102 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00091 171 239 1.5E-7 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00091 552 620 0.055 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00091 301 367 2.0E-5 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SMART SM00091 427 491 6.4E-6 T 13-10-2018 IPR000014 PAS domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.70.270 676 862 2.0E-56 T 13-10-2018 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.450.20 301 413 7.5E-28 T 13-10-2018 Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 SUPERFAMILY SSF55785 537 669 4.89E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 680 849 1.9E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_3990 7d4e39ea328cbd22140dadc22a12bb28 1113 Gene3D G3DSA:3.30.450.20 427 543 4.1E-26 T 13-10-2018 Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 Gene3D G3DSA:3.40.50.2300 1 119 7.7E-15 T 13-10-2018 Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 SUPERFAMILY SSF52172 1 84 1.99E-14 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 SMART SM00448 1 112 6.7E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 Pfam PF00563 EAL domain 148 378 2.5E-51 T 13-10-2018 IPR001633 EAL domain Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 SMART SM00052 139 383 6.9E-56 T 13-10-2018 IPR001633 EAL domain Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 SUPERFAMILY SSF141868 148 389 1.24E-61 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 Gene3D G3DSA:3.20.20.450 144 394 5.6E-66 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0561 0a38053561b11026c4f467e0d2c75512 411 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 13 44 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 Pfam PF00556 Antenna complex alpha/beta subunit 12 46 1.1E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 SUPERFAMILY SSF56918 4 46 5.76E-12 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 PRINTS PR00674 Light harvesting protein B chain signature 8 28 5.1E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 PRINTS PR00674 Light harvesting protein B chain signature 28 45 5.1E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 PIRSF PIRSF002900 1 46 8.6E-15 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0278 918e3275b91f900c0ecd99fc17e92291 46 Gene3D G3DSA:1.20.5.250 2 46 1.5E-20 T 13-10-2018 Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 Gene3D G3DSA:3.100.10.10 72 144 8.0E-13 T 13-10-2018 Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 SUPERFAMILY SSF52080 4 143 2.49E-44 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 5.7E-29 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 18.984 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Thivi_4220 0edd3884786fdf1ffaf37baf391185fa 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 6.3E-47 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Gene3D G3DSA:3.40.50.300 212 375 3.7E-43 T 13-10-2018 Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Pfam PF03880 DbpA RNA binding domain 388 458 2.0E-21 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Pfam PF00271 Helicase conserved C-terminal domain 234 338 6.3E-25 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Gene3D G3DSA:3.30.70.330 387 460 8.1E-20 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 SMART SM00487 23 220 2.2E-55 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 SMART SM00490 257 338 5.4E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.7E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 SUPERFAMILY SSF52540 73 354 1.1E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3605 0dfe4dedeabfe65568a8b3578198e492 461 Gene3D G3DSA:3.40.50.300 2 210 7.5E-73 T 13-10-2018 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 SUPERFAMILY SSF52540 2 253 2.88E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 SMART SM00382 337 504 1.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 SMART SM00382 26 223 1.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 Pfam PF00005 ABC transporter 328 459 7.9E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 SUPERFAMILY SSF52540 300 510 5.26E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 Pfam PF12848 ABC transporter 217 298 9.5E-30 T 13-10-2018 IPR032781 ABC-transporter extension domain Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 Gene3D G3DSA:3.40.50.300 1 259 1.4E-58 T 13-10-2018 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 Gene3D G3DSA:3.40.50.300 276 530 2.5E-52 T 13-10-2018 Thivi_3465 fbac6835c172d6c814d936d07dbc9631 639 Pfam PF00005 ABC transporter 18 178 1.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 3 476 3.5E-164 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 Hamap MF_00484 Glycogen synthase [glgA]. 1 477 42.552 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 Gene3D G3DSA:3.40.50.2000 1 474 3.5E-175 T 13-10-2018 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 Gene3D G3DSA:3.40.50.2000 248 459 3.5E-175 T 13-10-2018 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 Pfam PF00534 Glycosyl transferases group 1 283 440 6.2E-18 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 SUPERFAMILY SSF53756 3 479 9.42E-120 T 13-10-2018 Thivi_0102 06a0adff1a72a6d31dbe7545eb4d96a6 490 Pfam PF08323 Starch synthase catalytic domain 1 235 2.0E-74 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SUPERFAMILY SSF48452 252 532 3.22E-67 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:1.25.40.10 2 116 1.6E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SUPERFAMILY SSF48452 8 276 9.28E-36 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13424 Tetratricopeptide repeat 461 525 1.9E-14 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13432 Tetratricopeptide repeat 13 74 9.9E-5 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:1.25.40.10 365 397 1.8E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:3.40.50.2000 746 922 7.8E-107 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13414 TPR repeat 233 271 3.2E-9 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13414 TPR repeat 332 373 1.1E-12 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13414 TPR repeat 400 435 3.7E-8 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:3.40.50.11380 582 929 7.8E-107 T 13-10-2018 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13844 Glycosyl transferase family 41 765 940 6.6E-12 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF13844 Glycosyl transferase family 41 589 717 7.1E-20 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:1.25.40.10 122 294 5.4E-41 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:1.25.40.10 398 569 3.2E-47 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Pfam PF00515 Tetratricopeptide repeat 189 222 1.7E-7 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 Gene3D G3DSA:1.25.40.10 295 364 1.9E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 325 358 6.5E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 8 41 22.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 291 324 3.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 461 494 7.4E-8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 495 528 3.8E-8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 427 460 1.2E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 257 290 6.4E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 42 75 1.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 155 188 4.2 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 393 426 1.3E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 359 392 1.9E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 223 256 0.06 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0879 214522f20740b6edbfc05bf159902a71 972 SMART SM00028 189 222 7.0E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.132.30 642 728 6.5E-16 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.1790.20 1243 1421 4.0E-64 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 645 2.4E-28 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:2.40.50.100 1055 1130 3.1E-27 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF05000 RNA polymerase Rpb1, domain 4 820 870 1.1E-12 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:2.40.50.100 1131 1234 2.1E-29 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 SUPERFAMILY SSF64484 16 1472 0.0 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.132.30 754 897 1.8E-43 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.150.390 1423 1484 6.8E-27 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF04998 RNA polymerase Rpb1, domain 5 873 1422 4.4E-77 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 720 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF00623 RNA polymerase Rpb1, domain 2 395 486 6.4E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 397 9.7E-8 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 343 3.3E-87 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1481 18.764 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.40.90 375 417 6.7E-22 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 SMART SM00663 236 515 7.9E-182 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:2.40.50.100 1259 1322 4.0E-64 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.274.100 491 564 5.6E-24 T 13-10-2018 Thivi_4195 ad40f584af3c2e3471df1af60f1d2986 1510 Gene3D G3DSA:1.10.274.100 565 641 5.3E-14 T 13-10-2018 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 442 2.3E-174 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Gene3D G3DSA:3.30.300.180 1 107 2.6E-24 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 444 32.537 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 SUPERFAMILY SSF48295 341 444 6.8E-35 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 ProSitePatterns PS01008 DnaA protein signature. 403 422 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Gene3D G3DSA:1.10.8.60 276 347 1.6E-21 T 13-10-2018 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Gene3D G3DSA:1.10.1750.10 352 445 4.0E-34 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 SUPERFAMILY SSF52540 109 322 6.26E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 SMART SM00382 142 273 0.0012 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 6.5E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 175 189 6.5E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 143 163 6.5E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 268 6.5E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 403 422 6.5E-52 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Pfam PF11638 DnaA N-terminal domain 1 61 5.9E-17 T 13-10-2018 IPR024633 DnaA N-terminal domain Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Gene3D G3DSA:3.40.50.300 108 275 1.5E-46 T 13-10-2018 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 SMART SM00760 353 422 6.3E-40 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 354 422 2.2E-30 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Thivi_2843 0d1aaa5b8e49cb37b3f285e3f338d8fe 445 Pfam PF00308 Bacterial dnaA protein 110 327 2.8E-93 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 Gene3D G3DSA:3.40.640.10 79 353 7.7E-148 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 SUPERFAMILY SSF53383 1 451 5.16E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 Pfam PF02347 Glycine cleavage system P-protein 3 442 2.4E-118 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 45.544 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 Gene3D G3DSA:3.90.1150.10 68 447 7.7E-148 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_1840 9aaa4dd372757d3abda35c3626a6bd6c 466 PIRSF PIRSF006815 1 452 5.5E-162 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 634 647 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.5E-57 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.0E-94 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 Pfam PF01578 Cytochrome C assembly protein 89 295 9.1E-55 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 641 1.3E-121 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Thivi_3067 695ee3318afea20dc59b26dbc9856c23 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 644 9.1E-226 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 SUPERFAMILY SSF55021 248 325 4.31E-18 T 13-10-2018 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 PIRSF PIRSF000726 56 409 6.3E-144 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 PIRSF PIRSF000726 1 62 7.2E-22 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 402 2.5E-117 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Pfam PF00696 Amino acid kinase family 3 229 6.0E-52 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 SUPERFAMILY SSF53633 4 241 8.25E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 8.1E-132 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 SUPERFAMILY SSF55021 330 404 3.38E-22 T 13-10-2018 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Gene3D G3DSA:3.30.70.260 260 338 2.2E-55 T 13-10-2018 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Pfam PF13840 ACT domain 338 399 4.8E-13 T 13-10-2018 IPR027795 CASTOR, ACT domain Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Gene3D G3DSA:3.40.1160.10 1 254 1.6E-90 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Gene3D G3DSA:3.30.70.260 255 403 2.2E-55 T 13-10-2018 Thivi_0743 ec49441933d4977b8ae4d53543ee6df2 409 Pfam PF01842 ACT domain 267 323 6.9E-11 T 13-10-2018 IPR002912 ACT domain Thivi_0094 8f00928a862a37d21723e389e63db126 229 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 19 229 5.3E-106 T 13-10-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Thivi_0094 8f00928a862a37d21723e389e63db126 229 Gene3D G3DSA:3.20.20.70 18 229 1.8E-66 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0094 8f00928a862a37d21723e389e63db126 229 PIRSF PIRSF000370 17 229 5.6E-32 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Thivi_0094 8f00928a862a37d21723e389e63db126 229 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 19 229 33.742 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Thivi_0094 8f00928a862a37d21723e389e63db126 229 SUPERFAMILY SSF102114 62 156 1.59E-5 T 13-10-2018 Thivi_0536 00966e5754870361adca78ae867c3445 290 SUPERFAMILY SSF53448 4 278 3.83E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0536 00966e5754870361adca78ae867c3445 290 Gene3D G3DSA:3.90.550.10 1 288 1.8E-87 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0536 00966e5754870361adca78ae867c3445 290 Pfam PF00483 Nucleotidyl transferase 11 267 1.4E-28 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_0536 00966e5754870361adca78ae867c3445 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 266 3.0E-113 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 2.5E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Pfam PF00589 Phage integrase family 114 284 4.8E-49 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 298 6.4E-112 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Gene3D G3DSA:1.10.443.10 112 293 5.2E-65 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 299 58.836 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 SUPERFAMILY SSF56349 19 290 2.77E-57 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Gene3D G3DSA:1.10.150.130 5 101 4.3E-21 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_3723 84a01ce2ac0ab08b51899c8f1ca9d40c 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 299 56.232 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.521 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 8.7E-250 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 2.8E-66 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 SMART SM00382 140 325 4.9E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 SUPERFAMILY SSF50615 2 73 6.02E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Gene3D G3DSA:1.10.1140.10 343 461 3.2E-58 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Gene3D G3DSA:3.40.50.300 74 342 1.0E-113 T 13-10-2018 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 SUPERFAMILY SSF52540 75 345 4.61E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.9E-21 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 SUPERFAMILY SSF47917 343 459 1.99E-52 T 13-10-2018 Thivi_2592 ff00c109ce7bfa4717b507d62bb60664 461 Gene3D G3DSA:2.40.10.170 1 73 4.7E-30 T 13-10-2018 Thivi_3767 e22dcaeb97d8c6161096f016abba4d00 280 SMART SM00090 5 234 1.1E-22 T 13-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Thivi_3767 e22dcaeb97d8c6161096f016abba4d00 280 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 13-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Thivi_3767 e22dcaeb97d8c6161096f016abba4d00 280 Gene3D G3DSA:1.10.510.10 139 223 3.1E-17 T 13-10-2018 Thivi_3767 e22dcaeb97d8c6161096f016abba4d00 280 SUPERFAMILY SSF56112 18 222 6.24E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3767 e22dcaeb97d8c6161096f016abba4d00 280 Pfam PF01163 RIO1 family 31 219 3.2E-42 T 13-10-2018 Thivi_0124 e7a538b3844d38e8f2ec196ee2bd3597 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 109 2.5E-25 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0124 e7a538b3844d38e8f2ec196ee2bd3597 112 Gene3D G3DSA:2.30.30.110 2 111 6.0E-29 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_0124 e7a538b3844d38e8f2ec196ee2bd3597 112 PIRSF PIRSF033490 2 112 5.3E-27 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0124 e7a538b3844d38e8f2ec196ee2bd3597 112 SUPERFAMILY SSF50118 4 111 4.36E-29 T 13-10-2018 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 298 5.8E-77 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 Gene3D G3DSA:1.10.8.10 9 100 7.0E-7 T 13-10-2018 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 296 50.809 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 PIRSF PIRSF037167 1 303 4.0E-125 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 Gene3D G3DSA:3.40.50.150 101 276 1.7E-49 T 13-10-2018 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 8 289 9.8E-122 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Thivi_0624 896c06ec81ae93ea2c83044648240028 307 SUPERFAMILY SSF53335 11 289 1.96E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0624 896c06ec81ae93ea2c83044648240028 307 Pfam PF05175 Methyltransferase small domain 126 209 4.5E-18 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 158 1.1E-15 T 13-10-2018 IPR000014 PAS domain Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 280 9.5E-17 T 13-10-2018 IPR000014 PAS domain Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:1.10.287.130 466 552 3.8E-27 T 13-10-2018 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:1.20.120.160 897 1008 3.6E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF55785 21 149 5.93E-24 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF13185 GAF domain 327 467 1.2E-21 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:3.30.450.20 165 292 4.2E-20 T 13-10-2018 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF00512 His Kinase A (phospho-acceptor) domain 489 554 1.1E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF00072 Response regulator receiver domain 752 861 2.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF52172 748 868 3.56E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF55785 148 273 2.62E-22 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF01627 Hpt domain 919 999 8.4E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00091 163 230 9.9E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00091 36 102 9.8E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:3.30.450.40 324 462 4.8E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00065 328 477 0.0019 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF08448 PAS fold 43 153 8.0E-19 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 670 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 714 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 695 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 656 3.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF13426 PAS domain 174 274 1.3E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:3.30.565.10 553 717 1.7E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00073 909 1007 6.6E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF55874 543 712 1.57E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:3.40.50.2300 743 866 1.7E-40 T 13-10-2018 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00387 601 717 7.1E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Gene3D G3DSA:3.30.450.20 21 164 3.1E-29 T 13-10-2018 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00086 235 275 0.5 T 13-10-2018 IPR001610 PAC motif Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00086 109 151 13.0 T 13-10-2018 IPR001610 PAC motif Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF47384 475 555 8.04E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF47226 845 999 2.09E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SUPERFAMILY SSF55781 328 476 3.19E-11 T 13-10-2018 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00388 489 554 1.4E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 SMART SM00448 749 862 7.9E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2573 546d991f6c53c4a46ae72315852e60bc 1091 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 716 1.0E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SUPERFAMILY SSF50978 11 294 1.79E-94 T 13-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Gene3D G3DSA:2.130.10.10 181 338 3.0E-39 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Gene3D G3DSA:2.130.10.10 2 50 4.7E-13 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 PRINTS PR00320 G protein beta WD-40 repeat signature 240 254 6.6E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 PRINTS PR00320 G protein beta WD-40 repeat signature 72 86 6.6E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 PRINTS PR00320 G protein beta WD-40 repeat signature 30 44 6.6E-8 T 13-10-2018 IPR020472 G-protein beta WD-40 repeat Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 30 44 - T 13-10-2018 IPR019775 WD40 repeat, conserved site Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 198 212 - T 13-10-2018 IPR019775 WD40 repeat, conserved site Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 218 253 2.5E-6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 49 85 1.2E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 90 126 4.7E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 131 168 2.6E-5 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 16 43 1.6E-4 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Pfam PF00400 WD domain, G-beta repeat 259 294 2.5E-10 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 214 253 2.4E-9 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 88 127 2.3E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 130 169 1.7E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 46 85 3.8E-12 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 256 295 7.9E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 5 43 7.6E-6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 SMART SM00320 172 211 0.63 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 Gene3D G3DSA:2.130.10.10 51 180 4.3E-49 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 72 86 - T 13-10-2018 IPR019775 WD40 repeat, conserved site Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 156 170 - T 13-10-2018 IPR019775 WD40 repeat, conserved site Thivi_2147 98d72032d75f4ffe3176bce9691ed2fe 350 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 240 254 - T 13-10-2018 IPR019775 WD40 repeat, conserved site Thivi_1857 93f6fcf0bbe7c3018bcbcad3e72aed3e 237 Pfam PF04055 Radical SAM superfamily 32 184 1.7E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1857 93f6fcf0bbe7c3018bcbcad3e72aed3e 237 Pfam PF13353 4Fe-4S single cluster domain 27 118 1.2E-9 T 13-10-2018 Thivi_1857 93f6fcf0bbe7c3018bcbcad3e72aed3e 237 SUPERFAMILY SSF102114 28 197 4.97E-29 T 13-10-2018 Thivi_1857 93f6fcf0bbe7c3018bcbcad3e72aed3e 237 Gene3D G3DSA:3.20.20.70 12 211 8.7E-38 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1857 93f6fcf0bbe7c3018bcbcad3e72aed3e 237 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 14 198 3.2E-59 T 13-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 Gene3D G3DSA:3.20.20.450 7 207 5.7E-21 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 SMART SM00052 2 207 2.3E-6 T 13-10-2018 IPR001633 EAL domain Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 PIRSF PIRSF003180 13 411 2.0E-110 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 Pfam PF08668 HDOD domain 210 333 1.3E-22 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 Pfam PF00563 EAL domain 25 202 2.1E-14 T 13-10-2018 IPR001633 EAL domain Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 SUPERFAMILY SSF109604 193 407 1.0E-45 T 13-10-2018 Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 Gene3D G3DSA:1.10.3210.10 208 381 4.1E-33 T 13-10-2018 Thivi_3391 41ae3ebf65c8c7148dd18e5204184046 423 SUPERFAMILY SSF141868 15 206 1.57E-30 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Pfam PF04898 Glutamate synthase central domain 468 754 1.8E-112 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Pfam PF01493 GXGXG motif 1266 1453 1.0E-81 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 SUPERFAMILY SSF51395 456 1222 6.51E-268 T 13-10-2018 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Gene3D G3DSA:2.160.20.60 1239 1537 7.3E-111 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 SUPERFAMILY SSF56235 22 442 7.03E-159 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Gene3D G3DSA:3.20.20.70 802 1238 1.7E-203 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Gene3D G3DSA:3.60.20.10 22 448 6.8E-186 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Gene3D G3DSA:3.20.20.70 449 801 4.4E-133 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Pfam PF01645 Conserved region in glutamate synthase 817 1186 7.6E-159 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 SUPERFAMILY SSF69336 1234 1528 1.16E-93 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Thivi_2860 03c27e69ded2ce967955e69bb6c2d599 1551 Pfam PF00310 Glutamine amidotransferases class-II 22 440 4.8E-186 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Gene3D G3DSA:3.50.50.60 125 452 7.3E-149 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Pfam PF00581 Rhodanese-like domain 470 561 6.9E-8 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 SUPERFAMILY SSF55424 338 460 6.87E-24 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 SUPERFAMILY SSF52821 449 561 9.56E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 2.0E-13 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 188 2.0E-13 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.0E-13 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 2.0E-13 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 SMART SM00450 469 567 6.7E-14 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Gene3D G3DSA:3.40.250.10 453 565 2.3E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 447 1.7E-13 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 297 1.9E-56 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 Gene3D G3DSA:3.50.50.60 7 354 7.3E-149 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.8E-26 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 134 7.8E-26 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 7.8E-26 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 7.8E-26 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 7.8E-26 T 13-10-2018 Thivi_2741 b7eb5279c01753ea662912e77d9ed831 567 SUPERFAMILY SSF51905 1 328 3.86E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 Gene3D G3DSA:3.30.450.90 158 294 1.8E-48 T 13-10-2018 Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 13 571 2.5E-254 T 13-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 SMART SM00382 322 474 0.0052 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 SUPERFAMILY SSF160246 8 144 9.16E-35 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 Gene3D G3DSA:3.40.50.300 296 571 4.8E-106 T 13-10-2018 Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 Gene3D G3DSA:3.30.300.160 67 146 1.0E-5 T 13-10-2018 Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 389 403 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 SUPERFAMILY SSF52540 176 569 2.18E-98 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 147 6.1E-16 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Thivi_0242 b26c7a5f7c6538161c9f3ae21409e137 571 Pfam PF00437 Type II/IV secretion system protein 194 461 1.9E-89 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 Pfam PF12161 HsdM N-terminal domain 9 147 4.1E-25 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 6.0E-19 T 13-10-2018 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 284 296 6.0E-19 T 13-10-2018 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 343 6.0E-19 T 13-10-2018 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 199 6.0E-19 T 13-10-2018 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 Gene3D G3DSA:1.20.1260.30 1 150 4.7E-29 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 287 293 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 Pfam PF02384 N-6 DNA Methylase 160 467 1.5E-95 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 Gene3D G3DSA:3.40.50.150 160 456 1.4E-92 T 13-10-2018 Thivi_1547 eb089aa0c36989a48743961e8964a5af 881 SUPERFAMILY SSF53335 8 679 3.29E-127 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SUPERFAMILY SSF55073 274 426 1.49E-43 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 424 9.0E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Gene3D G3DSA:3.40.50.2300 13 136 4.9E-15 T 13-10-2018 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Gene3D G3DSA:3.40.50.2300 137 265 1.7E-33 T 13-10-2018 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 426 9.7E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Gene3D G3DSA:3.30.70.270 266 427 2.4E-51 T 13-10-2018 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Pfam PF00072 Response regulator receiver domain 140 249 7.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 Pfam PF00072 Response regulator receiver domain 17 124 8.2E-7 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SMART SM00267 258 428 3.1E-52 T 13-10-2018 IPR000160 GGDEF domain Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SUPERFAMILY SSF52172 16 129 1.85E-15 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SMART SM00448 138 252 9.6E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SMART SM00448 15 126 2.0E-4 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3250 91f0851ae07c1a47a925c99709e55b9f 428 SUPERFAMILY SSF52172 137 269 1.85E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 306 405 2.1E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13844 Glycosyl transferase family 41 693 875 1.0E-10 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13844 Glycosyl transferase family 41 525 659 8.3E-24 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:3.40.50.11380 515 864 7.7E-107 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF00515 Tetratricopeptide repeat 438 471 2.0E-7 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 139 233 2.2E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 7 119 2.9E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 234 267 2.5E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 72 105 270.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 404 437 6.3E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 38 71 19.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 336 369 5.6E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 4 37 66.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 200 233 3.6E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 268 301 5.6E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 438 471 3.2E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 370 403 0.048 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SMART SM00028 302 335 6.8E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 406 442 4.7E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 443 510 2.2E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13414 TPR repeat 207 248 1.5E-10 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13414 TPR repeat 275 316 9.8E-12 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13374 Tetratricopeptide repeat 336 365 5.3E-4 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13432 Tetratricopeptide repeat 137 200 0.0031 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13432 Tetratricopeptide repeat 8 69 1.5E-5 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SUPERFAMILY SSF48452 10 193 1.55E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Pfam PF13371 Tetratricopeptide repeat 387 436 5.2E-9 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:3.40.50.2000 681 857 7.7E-107 T 13-10-2018 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 SUPERFAMILY SSF48452 141 483 3.41E-67 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0878 f23616a8a7be561c1ed53d49f0a81cad 883 Gene3D G3DSA:1.25.40.10 234 305 6.4E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0514 7e1405369f4936e5d2ee37e2fd3db75e 537 Gene3D G3DSA:3.30.450.20 219 253 1.1E-12 T 13-10-2018 Thivi_0514 7e1405369f4936e5d2ee37e2fd3db75e 537 Gene3D G3DSA:3.30.950.30 378 528 1.3E-22 T 13-10-2018 IPR038461 Schlafen, AAA domain superfamily Thivi_0514 7e1405369f4936e5d2ee37e2fd3db75e 537 Pfam PF04326 Putative DNA-binding domain 392 524 2.4E-17 T 13-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Thivi_0514 7e1405369f4936e5d2ee37e2fd3db75e 537 Gene3D G3DSA:3.30.450.20 163 218 1.1E-12 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:2.40.30.170 246 342 8.2E-26 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 233 411 8.0E-33 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:2.40.50.100 141 175 7.5E-10 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:2.40.420.20 115 126 7.5E-10 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 124 336 1.4E-75 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:2.40.420.20 344 425 9.7E-20 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:1.10.287.470 176 191 7.5E-10 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 Gene3D G3DSA:2.40.30.170 127 140 7.5E-10 T 13-10-2018 Thivi_1899 218aee9f4c3cb63a2fec0bca1d4fb995 432 SUPERFAMILY SSF111369 138 341 3.92E-20 T 13-10-2018 Thivi_2087 1f5ffe71c19cdec7fb19160b993a25b6 234 Pfam PF00005 ABC transporter 22 163 1.8E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2087 1f5ffe71c19cdec7fb19160b993a25b6 234 SUPERFAMILY SSF52540 4 226 1.18E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2087 1f5ffe71c19cdec7fb19160b993a25b6 234 SMART SM00382 29 213 1.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2087 1f5ffe71c19cdec7fb19160b993a25b6 234 Gene3D G3DSA:3.40.50.300 2 234 2.8E-59 T 13-10-2018 Thivi_2087 1f5ffe71c19cdec7fb19160b993a25b6 234 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 5 234 2.2E-100 T 13-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SUPERFAMILY SSF55874 353 519 3.93E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SMART SM00448 547 663 3.9E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SMART SM00388 298 363 2.0E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Gene3D G3DSA:3.40.50.12740 546 677 4.7E-42 T 13-10-2018 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SUPERFAMILY SSF47384 283 364 4.9E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Pfam PF00072 Response regulator receiver domain 549 663 6.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Gene3D G3DSA:3.30.565.10 362 524 5.5E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Gene3D G3DSA:1.10.287.130 267 361 7.0E-28 T 13-10-2018 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SMART SM00387 410 521 3.1E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1743 b82d777510a514c0624fd76fada3b871 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 1.0E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 298 363 5.3E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1743 b82d777510a514c0624fd76fada3b871 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 520 3.2E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1743 b82d777510a514c0624fd76fada3b871 677 SUPERFAMILY SSF52172 548 668 7.12E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 44 344 1.2E-72 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 Gene3D G3DSA:3.30.2350.10 120 347 9.9E-70 T 13-10-2018 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 SUPERFAMILY SSF55174 47 99 1.75E-8 T 13-10-2018 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 SMART SM00363 48 107 3.6E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 166 180 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 SUPERFAMILY SSF55120 116 345 9.92E-59 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 Pfam PF00849 RNA pseudouridylate synthase 129 281 4.3E-29 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 Pfam PF01479 S4 domain 48 94 2.0E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_2190 be32e0568f69d0b3de06b24ef79954b7 348 Gene3D G3DSA:3.10.290.10 37 99 3.0E-15 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 PIRSF PIRSF000116 204 335 2.0E-13 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 PIRSF PIRSF000116 4 208 8.8E-48 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 Gene3D G3DSA:1.10.3730.40 184 340 9.9E-76 T 13-10-2018 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 SUPERFAMILY SSF48179 185 334 1.5E-70 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 2.4E-138 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 3.5E-67 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 Gene3D G3DSA:3.40.50.720 1 183 1.8E-78 T 13-10-2018 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 5.4E-74 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 SUPERFAMILY SSF51735 4 184 1.86E-74 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0995 64c89959e1f95fd7cf6106c44109fa76 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 330 45.643 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Pfam PF00932 Lamin Tail Domain 558 683 2.2E-16 T 13-10-2018 IPR001322 Lamin tail domain Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Gene3D G3DSA:3.90.780.10 1424 1638 2.3E-45 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 PRINTS PR01607 Apyrase family signature 1337 1357 2.2E-5 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 PRINTS PR01607 Apyrase family signature 1510 1533 2.2E-5 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 PRINTS PR01607 Apyrase family signature 1289 1312 2.2E-5 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 PRINTS PR01607 Apyrase family signature 1595 1614 2.2E-5 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Pfam PF06977 SdiA-regulated 199 430 1.4E-34 T 13-10-2018 IPR009722 SdiA-regulated Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Gene3D G3DSA:2.60.40.2030 745 851 3.3E-10 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Gene3D G3DSA:3.60.10.10 2344 2645 8.7E-31 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SUPERFAMILY SSF56300 1042 1373 2.75E-43 T 13-10-2018 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SUPERFAMILY SSF56219 2318 2645 6.41E-31 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Gene3D G3DSA:3.60.21.10 1042 1387 3.6E-65 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Pfam PF02872 5'-nucleotidase, C-terminal domain 1437 1618 5.7E-22 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SUPERFAMILY SSF55816 1414 1633 1.15E-33 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SUPERFAMILY SSF50956 181 432 3.66E-8 T 13-10-2018 Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 2346 2597 5.2E-6 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SUPERFAMILY SSF141072 742 852 7.98E-18 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_3786 018e4ebbaec94b1b2df1c624bc73fed5 2766 SMART SM00237 722 828 3.8E-5 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00073 871 967 2.7E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00388 326 391 3.3E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF55874 380 555 1.44E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:3.40.50.2300 573 708 9.6E-25 T 13-10-2018 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF52172 575 703 5.83E-25 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00387 442 558 8.9E-42 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:3.30.565.10 392 559 5.5E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:1.20.120.160 859 970 1.2E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 497 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 555 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 511 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Pfam PF00512 His Kinase A (phospho-acceptor) domain 326 391 2.7E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:3.40.50.2300 709 841 1.1E-38 T 13-10-2018 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 555 1.1E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:1.10.287.130 313 391 1.5E-23 T 13-10-2018 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Pfam PF01627 Hpt domain 881 957 8.6E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00448 575 694 1.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00448 719 835 2.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF158472 251 299 7.32E-6 T 13-10-2018 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF52172 715 838 1.85E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Gene3D G3DSA:1.20.1480.50 213 310 3.2E-6 T 13-10-2018 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF47384 311 392 4.51E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SMART SM00304 251 304 0.0022 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Pfam PF00072 Response regulator receiver domain 721 835 6.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 Pfam PF00072 Response regulator receiver domain 577 693 1.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4164 d9212bb2e6aefd8995bb138ff570e0fd 1051 SUPERFAMILY SSF47226 818 955 1.96E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1848 da04dbcaf5c003dd69106389afad30a2 289 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 267 41.903 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Thivi_1848 da04dbcaf5c003dd69106389afad30a2 289 Gene3D G3DSA:3.40.50.150 1 282 1.1E-105 T 13-10-2018 Thivi_1848 da04dbcaf5c003dd69106389afad30a2 289 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 269 7.7E-80 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Thivi_1848 da04dbcaf5c003dd69106389afad30a2 289 SUPERFAMILY SSF53335 9 269 4.47E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 SUPERFAMILY SSF81606 202 358 3.66E-5 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 SMART SM00448 26 139 1.0E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 SUPERFAMILY SSF55874 449 561 3.93E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 SMART SM00331 186 401 4.5E-11 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Gene3D G3DSA:3.30.565.10 419 582 2.3E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Pfam PF00072 Response regulator receiver domain 29 139 1.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 SUPERFAMILY SSF52172 28 164 1.22E-40 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Gene3D G3DSA:3.60.40.10 184 404 4.7E-40 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 212 398 5.7E-33 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Pfam PF13581 Histidine kinase-like ATPase domain 453 573 1.3E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1213 ca3eda1b7ebeadb06046ccfa85077a74 590 Gene3D G3DSA:3.40.50.2300 22 161 1.8E-39 T 13-10-2018 Thivi_4579 75479f97f396c053db29c9efca17b93d 246 Pfam PF08534 Redoxin 7 160 1.1E-29 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Thivi_4579 75479f97f396c053db29c9efca17b93d 246 PRINTS PR00160 Glutaredoxin signature 214 227 5.4E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_4579 75479f97f396c053db29c9efca17b93d 246 PRINTS PR00160 Glutaredoxin signature 228 241 5.4E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_4579 75479f97f396c053db29c9efca17b93d 246 PRINTS PR00160 Glutaredoxin signature 173 191 5.4E-7 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_4579 75479f97f396c053db29c9efca17b93d 246 Gene3D G3DSA:3.40.30.10 173 241 6.2E-18 T 13-10-2018 Thivi_4579 75479f97f396c053db29c9efca17b93d 246 Gene3D G3DSA:3.40.30.10 5 165 4.8E-59 T 13-10-2018 Thivi_4579 75479f97f396c053db29c9efca17b93d 246 Pfam PF00462 Glutaredoxin 174 231 2.6E-14 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Thivi_4579 75479f97f396c053db29c9efca17b93d 246 SUPERFAMILY SSF52833 6 241 2.07E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 Gene3D G3DSA:3.40.1390.20 8 132 2.9E-19 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 Gene3D G3DSA:3.40.50.300 133 315 3.9E-62 T 13-10-2018 Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 SUPERFAMILY SSF75138 13 133 1.22E-21 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 Pfam PF02603 HPr Serine kinase N terminus 5 130 1.4E-21 T 13-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 Pfam PF07475 HPr Serine kinase C-terminal domain 133 303 2.1E-58 T 13-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 10 307 1.7E-95 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 311 32.939 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Thivi_2238 82bdc562a9986ea3a3d4915cb0cd7720 320 SUPERFAMILY SSF53795 135 303 2.14E-33 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:1.10.287.130 391 478 1.2E-27 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF55874 469 644 4.58E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF158472 222 271 1.83E-11 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00304 222 274 3.3E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00304 46 101 23.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:3.30.450.20 279 388 5.3E-21 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00388 415 480 7.2E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:3.40.50.2300 811 940 1.0E-39 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00091 281 352 2.9E-5 T 13-10-2018 IPR000014 PAS domain Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 527 646 1.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 1.9E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:1.20.120.160 959 1068 1.5E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF01627 Hpt domain 991 1062 2.0E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF55785 268 394 8.2E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 402 1.1E-13 T 13-10-2018 IPR000014 PAS domain Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00387 527 648 1.5E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF47384 403 481 6.67E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:1.20.1480.50 187 278 1.8E-15 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:3.40.50.12740 665 807 4.3E-30 T 13-10-2018 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00448 814 927 2.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SMART SM00448 666 782 6.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Gene3D G3DSA:3.30.565.10 479 650 1.3E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF00072 Response regulator receiver domain 816 927 2.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF00072 Response regulator receiver domain 668 780 5.7E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF00512 His Kinase A (phospho-acceptor) domain 416 480 3.9E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF52172 812 932 4.55E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF00672 HAMP domain 222 270 1.8E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 Pfam PF13426 PAS domain 292 394 2.8E-10 T 13-10-2018 IPR000014 PAS domain Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF52172 662 787 5.69E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3991 8cbceac180da94fcef6d300bc7500ec0 1158 SUPERFAMILY SSF47226 910 1061 2.36E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 SUPERFAMILY SSF46785 5 141 1.29E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 3.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 3.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 SMART SM00347 26 126 1.2E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 Gene3D G3DSA:1.10.10.10 2 141 2.1E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1646 ac3ddd1339af6d1a545bb55c71af1d90 155 Pfam PF12802 MarR family 31 90 3.7E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_3803 cf96f42642b11efc81051ce255742731 279 PIRSF PIRSF038455 1 279 2.0E-91 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Thivi_3803 cf96f42642b11efc81051ce255742731 279 SUPERFAMILY SSF46626 64 162 7.07E-13 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3803 cf96f42642b11efc81051ce255742731 279 Gene3D G3DSA:1.10.760.10 74 157 8.3E-63 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3803 cf96f42642b11efc81051ce255742731 279 Gene3D G3DSA:1.10.760.10 49 278 8.3E-63 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3803 cf96f42642b11efc81051ce255742731 279 SUPERFAMILY SSF46626 168 278 6.6E-33 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3803 cf96f42642b11efc81051ce255742731 279 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 72 279 1.4E-70 T 13-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 Thivi_1122 513c40583b854bd40461262e26f9896a 443 Gene3D G3DSA:1.10.4030.10 36 162 5.0E-35 T 13-10-2018 Thivi_1122 513c40583b854bd40461262e26f9896a 443 Pfam PF13616 PPIC-type PPIASE domain 294 395 1.3E-27 T 13-10-2018 Thivi_1122 513c40583b854bd40461262e26f9896a 443 Hamap MF_01183 Chaperone SurA [surA]. 21 440 33.467 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Thivi_1122 513c40583b854bd40461262e26f9896a 443 SUPERFAMILY SSF54534 297 396 2.29E-31 T 13-10-2018 Thivi_1122 513c40583b854bd40461262e26f9896a 443 Gene3D G3DSA:3.10.50.40 189 399 2.2E-81 T 13-10-2018 Thivi_1122 513c40583b854bd40461262e26f9896a 443 Pfam PF00639 PPIC-type PPIASE domain 192 285 2.1E-22 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Thivi_1122 513c40583b854bd40461262e26f9896a 443 SUPERFAMILY SSF54534 186 289 4.19E-27 T 13-10-2018 Thivi_1122 513c40583b854bd40461262e26f9896a 443 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 333 354 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Thivi_1122 513c40583b854bd40461262e26f9896a 443 SUPERFAMILY SSF109998 40 215 5.62E-42 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_1122 513c40583b854bd40461262e26f9896a 443 Pfam PF09312 SurA N-terminal domain 39 156 5.9E-37 T 13-10-2018 IPR015391 SurA N-terminal Thivi_1122 513c40583b854bd40461262e26f9896a 443 Gene3D G3DSA:3.10.50.40 296 397 2.2E-81 T 13-10-2018 Thivi_2216 a249060d723f0cf30ef6828a79310efd 253 SUPERFAMILY SSF52980 40 244 1.45E-5 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2216 a249060d723f0cf30ef6828a79310efd 253 Pfam PF07788 PD-(D/E)XK nuclease superfamily 173 242 1.9E-24 T 13-10-2018 IPR012431 PD-(D/E)XK nuclease Thivi_2216 a249060d723f0cf30ef6828a79310efd 253 Pfam PF12644 Protein of unknown function (DUF3782) 91 172 5.3E-26 T 13-10-2018 IPR024271 Protein of unknown function DUF3782 Thivi_0674 4a4012a9856eafb96e7fb0fc72a503a4 360 Gene3D G3DSA:1.10.45.10 327 356 1.8E-5 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_0674 4a4012a9856eafb96e7fb0fc72a503a4 360 SUPERFAMILY SSF56176 6 175 7.48E-31 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_0674 4a4012a9856eafb96e7fb0fc72a503a4 360 Pfam PF01565 FAD binding domain 7 137 1.8E-18 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_0674 4a4012a9856eafb96e7fb0fc72a503a4 360 Gene3D G3DSA:3.30.465.10 52 174 7.3E-34 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_0674 4a4012a9856eafb96e7fb0fc72a503a4 360 SUPERFAMILY SSF55103 192 358 1.64E-20 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Thivi_4082 dab4b97563ef94b1b7ea1b6215e42a2b 147 Gene3D G3DSA:1.10.10.410 90 146 2.9E-17 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Thivi_4082 dab4b97563ef94b1b7ea1b6215e42a2b 147 SUPERFAMILY SSF89095 2 145 7.32E-41 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Thivi_4082 dab4b97563ef94b1b7ea1b6215e42a2b 147 Pfam PF09424 Yqey-like protein 3 145 9.6E-56 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Thivi_4082 dab4b97563ef94b1b7ea1b6215e42a2b 147 Gene3D G3DSA:1.10.1510.10 1 89 7.9E-30 T 13-10-2018 Thivi_3307 e6bd52582501ab0d58de998ecb626b02 145 SUPERFAMILY SSF52172 5 130 1.21E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3307 e6bd52582501ab0d58de998ecb626b02 145 SMART SM00448 9 122 9.5E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3307 e6bd52582501ab0d58de998ecb626b02 145 Gene3D G3DSA:3.40.50.12740 8 142 4.0E-39 T 13-10-2018 Thivi_3307 e6bd52582501ab0d58de998ecb626b02 145 Pfam PF00072 Response regulator receiver domain 11 123 1.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SUPERFAMILY SSF52172 768 885 4.41E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 481 2.0E-14 T 13-10-2018 IPR000014 PAS domain Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.30.450.20 351 473 3.8E-20 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Pfam PF00072 Response regulator receiver domain 771 882 1.8E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Pfam PF00072 Response regulator receiver domain 917 1028 4.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Pfam PF00512 His Kinase A (phospho-acceptor) domain 520 586 1.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00091 360 426 2.1E-7 T 13-10-2018 IPR000014 PAS domain Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.40.50.12740 915 1048 3.8E-39 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.40.50.12740 768 914 9.7E-35 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.30.450.20 225 315 8.7E-16 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00086 433 475 2.2E-7 T 13-10-2018 IPR001610 PAC motif Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 697 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 722 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 741 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 683 4.1E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:1.10.287.130 483 584 5.2E-25 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00387 633 744 1.9E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00388 520 586 1.1E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SUPERFAMILY SSF52172 913 1034 1.99E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Pfam PF08448 PAS fold 369 476 6.1E-11 T 13-10-2018 IPR013656 PAS fold-4 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SUPERFAMILY SSF55874 575 742 1.03E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.30.450.20 69 222 5.0E-22 T 13-10-2018 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00448 769 882 9.9E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SMART SM00448 915 1029 6.0E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SUPERFAMILY SSF55785 351 473 4.06E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 633 742 1.6E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 Gene3D G3DSA:3.30.565.10 585 745 9.6E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3770 5fa004f89bef2e495d85d5ebb52de2d2 1058 SUPERFAMILY SSF47384 505 587 6.08E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 Gene3D G3DSA:3.30.300.30 340 443 2.2E-33 T 13-10-2018 Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 Pfam PF00501 AMP-binding enzyme 94 296 2.8E-13 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 Pfam PF14535 AMP-binding enzyme C-terminal domain 346 442 5.8E-31 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 SUPERFAMILY SSF56801 34 408 6.41E-59 T 13-10-2018 Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 Gene3D G3DSA:3.40.50.12780 14 339 2.3E-124 T 13-10-2018 Thivi_2394 14162f69c63a3a710b56c32d2c94ce3a 446 PIRSF PIRSF006444 10 444 5.1E-207 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 Pfam PF00082 Subtilase family 181 458 6.4E-42 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 SMART SM00060 492 573 1.9E-7 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 Gene3D G3DSA:3.40.50.200 165 468 1.7E-60 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 Gene3D G3DSA:2.60.40.10 490 580 1.1E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 PRINTS PR00723 Subtilisin serine protease family (S8) signature 416 432 1.1E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 PRINTS PR00723 Subtilisin serine protease family (S8) signature 244 257 1.1E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 PRINTS PR00723 Subtilisin serine protease family (S8) signature 181 200 1.1E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 SUPERFAMILY SSF52743 174 459 1.57E-56 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 248 258 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 SUPERFAMILY SSF49265 488 574 3.69E-11 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 186 197 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Thivi_0614 fcb085be1e2240883cad3bcc028bef43 585 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 417 427 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Thivi_0376 f5989fd385907bc76af1d6d1627aeb51 124 Pfam PF00072 Response regulator receiver domain 3 115 1.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0376 f5989fd385907bc76af1d6d1627aeb51 124 Gene3D G3DSA:3.40.50.2300 1 122 7.7E-38 T 13-10-2018 Thivi_0376 f5989fd385907bc76af1d6d1627aeb51 124 SMART SM00448 1 115 9.5E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0376 f5989fd385907bc76af1d6d1627aeb51 124 SUPERFAMILY SSF52172 1 121 1.71E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00387 388 504 2.3E-40 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SUPERFAMILY SSF55874 330 500 6.16E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Gene3D G3DSA:3.40.50.2300 533 656 2.9E-37 T 13-10-2018 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 1.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 1.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 1.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 1.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SUPERFAMILY SSF52172 535 655 3.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Gene3D G3DSA:3.30.565.10 340 504 6.9E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF00072 Response regulator receiver domain 536 651 1.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00388 276 341 7.5E-27 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SUPERFAMILY SSF47226 668 795 1.83E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF00672 HAMP domain 185 233 1.4E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00304 183 236 4.9E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00304 731 801 84.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF01627 Hpt domain 708 790 2.0E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SUPERFAMILY SSF158472 185 233 9.29E-8 T 13-10-2018 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF00512 His Kinase A (phospho-acceptor) domain 276 341 2.2E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF17152 Periplasmic sensor domain 40 146 2.4E-22 T 13-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Gene3D G3DSA:1.20.1480.50 149 237 1.2E-7 T 13-10-2018 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 503 1.8E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Gene3D G3DSA:1.20.120.160 675 795 4.6E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00073 696 786 1.2E-4 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 Gene3D G3DSA:1.10.287.130 240 339 4.5E-32 T 13-10-2018 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SMART SM00448 534 651 3.6E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1315 8bd918a9dd357c14b7a7119c04e2a065 810 SUPERFAMILY SSF47384 261 342 1.0E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 18.772 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 133 1.1E-9 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Thivi_2591 e11335e116dc7877880c789be2fab78f 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 9.9E-27 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.1E-38 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 SUPERFAMILY SSF51344 3 86 5.23E-22 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 Gene3D G3DSA:1.20.5.440 91 133 1.4E-13 T 13-10-2018 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 SUPERFAMILY SSF46604 89 137 2.38E-13 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 Gene3D G3DSA:2.60.15.10 3 90 1.4E-27 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2591 e11335e116dc7877880c789be2fab78f 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 1.0E-23 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 2.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 2.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 2.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 590 2.2E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Gene3D G3DSA:1.10.287.130 376 452 1.3E-27 T 13-10-2018 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Pfam PF00512 His Kinase A (phospho-acceptor) domain 387 452 2.6E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Gene3D G3DSA:1.10.8.500 327 375 3.1E-16 T 13-10-2018 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SMART SM00388 386 452 2.5E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SMART SM01358 44 297 6.1E-17 T 13-10-2018 IPR032255 Helical bimodular sensor domain Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Pfam PF00072 Response regulator receiver domain 642 750 7.3E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SMART SM00387 499 612 1.8E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SUPERFAMILY SSF52172 639 764 4.41E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SUPERFAMILY SSF158472 326 374 3.92E-9 T 13-10-2018 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SMART SM00448 639 752 8.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SMART SM00304 326 379 7.8E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Gene3D G3DSA:3.30.565.10 453 616 3.2E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SUPERFAMILY SSF55874 441 612 2.88E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 611 2.6E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 SUPERFAMILY SSF47384 374 453 1.43E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1863 24b4f3856eb268a9aa986920cb5389e5 851 Gene3D G3DSA:3.40.50.12740 638 836 3.8E-38 T 13-10-2018 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:2.40.50.140 140 203 7.0E-19 T 13-10-2018 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 2.1E-119 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Pfam PF00575 S1 RNA binding domain 138 198 2.1E-4 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Pfam PF14520 Helix-hairpin-helix domain 436 491 9.8E-11 T 13-10-2018 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:1.10.150.20 435 493 5.7E-23 T 13-10-2018 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:3.30.1480.10 1 134 3.2E-40 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 29.25 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Pfam PF08529 NusA N-terminal domain 4 128 2.7E-36 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF47794 435 496 2.04E-17 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:1.10.150.20 357 426 6.8E-23 T 13-10-2018 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 493 1.4E-18 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 370 418 2.2E-14 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF50249 137 204 3.14E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:3.30.300.20 204 282 2.2E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SMART SM00316 138 205 4.8E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF47794 362 421 1.41E-12 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Gene3D G3DSA:3.30.300.20 283 352 1.8E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF54814 284 347 7.85E-14 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 Pfam PF13184 NusA-like KH domain 235 302 2.8E-28 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF54814 205 283 1.77E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Thivi_3167 5738c36969063adcd10b76d6d92938e7 500 SUPERFAMILY SSF69705 1 130 9.81E-38 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.3E-37 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.147 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 1.8E-132 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2322 e927c60d33f426dc21ee682a9b25c83f 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 2.7E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_4094 a8dc987141bf509fee097f1132aa679c 289 Gene3D G3DSA:3.40.190.10 124 224 5.9E-39 T 13-10-2018 Thivi_4094 a8dc987141bf509fee097f1132aa679c 289 Gene3D G3DSA:3.40.190.10 35 231 5.9E-39 T 13-10-2018 Thivi_4094 a8dc987141bf509fee097f1132aa679c 289 SMART SM00062 40 263 1.0E-23 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4094 a8dc987141bf509fee097f1132aa679c 289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 261 7.1E-34 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4094 a8dc987141bf509fee097f1132aa679c 289 SUPERFAMILY SSF53850 36 261 5.67E-40 T 13-10-2018 Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 86 101 1.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 Gene3D G3DSA:1.10.10.10 13 119 5.5E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 SUPERFAMILY SSF46785 25 119 3.57E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 Pfam PF01022 Bacterial regulatory protein, arsR family 44 88 1.7E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_2787 d9471457bd19ff01c5e6e144f6fa3e63 122 SMART SM00418 37 115 5.1E-25 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1619 f6bfa3489583af53cf4c6bc20221fe02 338 SUPERFAMILY SSF109998 45 193 3.53E-6 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_1619 f6bfa3489583af53cf4c6bc20221fe02 338 Pfam PF13145 PPIC-type PPIASE domain 159 287 5.9E-11 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Thivi_1619 f6bfa3489583af53cf4c6bc20221fe02 338 Gene3D G3DSA:1.10.4030.30 64 278 2.2E-14 T 13-10-2018 Thivi_1619 f6bfa3489583af53cf4c6bc20221fe02 338 SUPERFAMILY SSF54534 174 276 6.48E-8 T 13-10-2018 Thivi_1619 f6bfa3489583af53cf4c6bc20221fe02 338 Gene3D G3DSA:3.10.50.40 178 277 2.2E-14 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Gene3D G3DSA:3.40.50.970 805 1185 3.1E-151 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SUPERFAMILY SSF54862 674 848 1.4E-21 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SUPERFAMILY SSF52922 260 419 2.43E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Gene3D G3DSA:3.40.920.10 423 633 1.0E-77 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 755 766 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 352 7.2E-13 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Gene3D G3DSA:3.40.50.970 3 259 6.6E-103 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1182 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SUPERFAMILY SSF53323 424 677 1.83E-73 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Gene3D G3DSA:3.30.70.20 678 801 1.6E-33 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SUPERFAMILY SSF52518 804 1185 2.95E-121 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 22 248 4.1E-78 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SUPERFAMILY SSF52518 5 259 2.55E-75 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Gene3D G3DSA:3.40.50.920 261 421 2.7E-60 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 433 617 5.0E-29 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Pfam PF10371 Domain of unknown function 635 687 1.4E-21 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 SMART SM00890 631 688 8.1E-29 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 Pfam PF13484 4Fe-4S double cluster binding domain 698 767 6.7E-10 T 13-10-2018 Thivi_3813 00a14b117e12a4e80e4c91fae2e4baac 1195 PIRSF PIRSF000159 1 1191 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 484 500 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 68 81 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 733 749 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 522 534 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 111 125 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 265 278 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 417 431 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 502 519 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR00418 DNA topoisomerase II family signature 33 48 7.9E-69 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 SMART SM00387 29 173 2.7E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Gene3D G3DSA:3.10.20.690 593 680 8.0E-6 T 13-10-2018 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 801 98.305 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Pfam PF00204 DNA gyrase B 218 387 5.5E-56 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Gene3D G3DSA:3.30.230.10 218 389 1.2E-69 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 SMART SM00433 33 794 3.6E-260 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 SUPERFAMILY SSF56719 391 792 6.28E-86 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 170 8.6E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 729 790 1.2E-29 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Gene3D G3DSA:3.30.565.10 1 217 2.5E-90 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 193 206 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 309 325 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 178 193 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 357 371 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 770 786 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 217 239 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 467 476 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 3 13 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 371 391 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 PRINTS PR01159 DNA gyrase subunit B signature 754 766 1.8E-74 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 3 801 6.6E-301 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Pfam PF01751 Toprim domain 416 528 2.7E-17 T 13-10-2018 IPR006171 TOPRIM domain Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 SUPERFAMILY SSF55874 3 215 1.18E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 SUPERFAMILY SSF54211 218 389 1.14E-55 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Gene3D G3DSA:3.40.50.670 395 592 9.3E-73 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 Gene3D G3DSA:3.40.50.670 701 800 2.1E-25 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2905 1b6c1e0e2dd47d7c8921b6c12a1d882f 801 ProSitePatterns PS00177 DNA topoisomerase II signature. 419 427 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_1052 c564b5042980321f81346647e1bef91c 125 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 15 120 3.8E-25 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_2703 2e4bd74b8107ff01ddd57636f8a649dd 256 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 229 1.8E-85 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Thivi_2703 2e4bd74b8107ff01ddd57636f8a649dd 256 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 104.772 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Thivi_2703 2e4bd74b8107ff01ddd57636f8a649dd 256 SUPERFAMILY SSF56300 3 205 1.52E-26 T 13-10-2018 Thivi_2703 2e4bd74b8107ff01ddd57636f8a649dd 256 Pfam PF00149 Calcineurin-like phosphoesterase 2 199 2.1E-7 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_2703 2e4bd74b8107ff01ddd57636f8a649dd 256 Gene3D G3DSA:3.60.21.10 1 234 2.3E-8 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_1755 f6782b6866d3ca1d64c8b4c880f6b152 207 SUPERFAMILY SSF53448 11 192 9.69E-31 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1755 f6782b6866d3ca1d64c8b4c880f6b152 207 Pfam PF12804 MobA-like NTP transferase domain 13 163 1.4E-31 T 13-10-2018 IPR025877 MobA-like NTP transferase Thivi_1755 f6782b6866d3ca1d64c8b4c880f6b152 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 11 192 3.1E-65 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Thivi_1755 f6782b6866d3ca1d64c8b4c880f6b152 207 Gene3D G3DSA:3.90.550.10 7 198 2.7E-50 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1755 f6782b6866d3ca1d64c8b4c880f6b152 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 9 196 27.052 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Thivi_1123 02322dd3c4f9025f321482435a82f974 334 Gene3D G3DSA:3.40.718.10 1 326 2.2E-124 T 13-10-2018 Thivi_1123 02322dd3c4f9025f321482435a82f974 334 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 321 2.4E-127 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Thivi_1123 02322dd3c4f9025f321482435a82f974 334 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 30 318 4.8E-108 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Thivi_1123 02322dd3c4f9025f321482435a82f974 334 SUPERFAMILY SSF53659 3 324 1.76E-110 T 13-10-2018 Thivi_1123 02322dd3c4f9025f321482435a82f974 334 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 36.521 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Thivi_4294 edc68854f9611c185687c7daa0afc705 288 Gene3D G3DSA:1.10.4030.30 36 253 7.1E-35 T 13-10-2018 Thivi_4294 edc68854f9611c185687c7daa0afc705 288 Pfam PF00639 PPIC-type PPIASE domain 153 246 2.8E-22 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Thivi_4294 edc68854f9611c185687c7daa0afc705 288 SUPERFAMILY SSF54534 139 246 1.31E-24 T 13-10-2018 Thivi_4294 edc68854f9611c185687c7daa0afc705 288 Gene3D G3DSA:3.10.50.40 147 250 7.1E-35 T 13-10-2018 Thivi_4294 edc68854f9611c185687c7daa0afc705 288 SUPERFAMILY SSF109998 33 175 3.65E-13 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_4294 edc68854f9611c185687c7daa0afc705 288 TIGRFAM TIGR02933 nifM_nitrog: nitrogen fixation protein NifM 16 284 1.1E-58 T 13-10-2018 IPR014282 Nitrogen fixation protein NifM Thivi_0053 aec0e294634087eac995f90caf9735b7 424 Pfam PF03471 Transporter associated domain 342 415 6.6E-12 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_0053 aec0e294634087eac995f90caf9735b7 424 Pfam PF01595 Domain of unknown function DUF21 12 181 7.5E-51 T 13-10-2018 IPR002550 CNNM, transmembrane domain Thivi_0053 aec0e294634087eac995f90caf9735b7 424 Gene3D G3DSA:3.30.465.10 341 416 3.5E-23 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_0053 aec0e294634087eac995f90caf9735b7 424 SUPERFAMILY SSF54631 200 343 1.25E-28 T 13-10-2018 Thivi_0053 aec0e294634087eac995f90caf9735b7 424 Pfam PF00571 CBS domain 276 325 2.7E-5 T 13-10-2018 IPR000644 CBS domain Thivi_0053 aec0e294634087eac995f90caf9735b7 424 SUPERFAMILY SSF56176 338 416 1.85E-17 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_0053 aec0e294634087eac995f90caf9735b7 424 Gene3D G3DSA:3.10.580.10 186 340 1.6E-42 T 13-10-2018 Thivi_0053 aec0e294634087eac995f90caf9735b7 424 SMART SM01091 340 418 2.8E-17 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 SMART SM01185 69 123 5.3E-27 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 SUPERFAMILY SSF50249 68 128 1.46E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.811 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 SMART SM00841 131 186 1.4E-31 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 4.3E-27 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.5E-78 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 SUPERFAMILY SSF50104 2 63 2.46E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 SUPERFAMILY SSF50249 130 187 1.13E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 PIRSF PIRSF005901 2 188 8.2E-69 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 4.6E-23 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Gene3D G3DSA:2.40.50.140 130 188 9.6E-27 T 13-10-2018 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.8E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Gene3D G3DSA:2.40.50.140 66 129 1.8E-27 T 13-10-2018 Thivi_0222 9b860abd08ab3a8248726b740dff5cf6 190 Gene3D G3DSA:2.30.30.30 1 65 5.1E-28 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Thivi_2948 c75c599437958ecdcf96312cb2a67ac1 120 SMART SM01126 1 99 0.0093 T 13-10-2018 IPR024445 ISXO2-like transposase domain Thivi_2948 c75c599437958ecdcf96312cb2a67ac1 120 Pfam PF12762 ISXO2-like transposase domain 3 99 8.4E-14 T 13-10-2018 IPR024445 ISXO2-like transposase domain Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 Pfam PF00155 Aminotransferase class I and II 28 360 3.1E-36 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 367 7.1E-92 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 370 53.975 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 SUPERFAMILY SSF53383 9 369 1.3E-68 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 Gene3D G3DSA:3.40.640.10 50 276 4.5E-106 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_3225 2056b512ecdd3ce83882091c1cb157f6 370 Gene3D G3DSA:3.90.1150.10 13 365 4.5E-106 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_4143 f0ce13453c41d81befb3856e21256c51 146 Gene3D G3DSA:2.30.30.40 75 144 3.2E-9 T 13-10-2018 Thivi_4143 f0ce13453c41d81befb3856e21256c51 146 Pfam PF08239 Bacterial SH3 domain 83 139 2.6E-8 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Thivi_3054 ce299d1ce1d307f593dc581a8a72c5d9 467 Gene3D G3DSA:3.30.70.270 336 459 4.0E-6 T 13-10-2018 Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 SUPERFAMILY SSF50129 6 143 3.35E-39 T 13-10-2018 IPR011032 GroES-like superfamily Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 SMART SM00829 18 326 3.5E-8 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 328 4.0E-123 T 13-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 Gene3D G3DSA:3.40.50.720 128 295 4.0E-115 T 13-10-2018 Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 Pfam PF00107 Zinc-binding dehydrogenase 161 273 4.0E-15 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 SUPERFAMILY SSF51735 118 294 1.49E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0214 3c38a47771fabfbf0ab2c283217608b9 329 Gene3D G3DSA:3.90.180.10 20 327 4.0E-115 T 13-10-2018 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 TIGRFAM TIGR01083 nth: endonuclease III 27 217 3.8E-83 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 SUPERFAMILY SSF48150 24 231 1.04E-70 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 Gene3D G3DSA:1.10.340.30 44 155 8.1E-75 T 13-10-2018 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 57 189 8.4E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 Pfam PF00633 Helix-hairpin-helix motif 123 150 2.1E-7 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 Hamap MF_00942 Endonuclease III [nth]. 24 232 37.186 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 Gene3D G3DSA:1.10.1670.10 34 226 8.1E-75 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 PIRSF PIRSF001435 21 233 2.1E-49 T 13-10-2018 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 ProSitePatterns PS01155 Endonuclease III family signature. 125 154 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Thivi_3372 d0d0a9cceaf6f743a92874341dcecdc2 234 SMART SM00478 61 208 2.9E-55 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 Gene3D G3DSA:3.10.105.10 405 643 2.3E-49 T 13-10-2018 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 SUPERFAMILY SSF53850 31 662 5.57E-85 T 13-10-2018 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 PIRSF PIRSF002741 167 673 4.9E-48 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 PIRSF PIRSF002741 1 90 6.4 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 Gene3D G3DSA:3.40.190.10 268 393 6.6E-11 T 13-10-2018 Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 167 588 1.2E-48 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain Thivi_0901 2ec869f944b9069cdeacaf16bf294318 719 Gene3D G3DSA:3.90.76.10 46 267 2.1E-19 T 13-10-2018 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.421 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 SUPERFAMILY SSF81271 279 360 1.24E-35 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Gene3D G3DSA:3.10.20.30 48 361 1.1E-149 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 7.8E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.8E-157 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 PIRSF PIRSF006641 1 363 4.3E-154 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-34 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Gene3D G3DSA:1.10.150.300 113 200 1.1E-149 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 SUPERFAMILY SSF52540 3 300 4.28E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.7E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Thivi_2628 dd1950dd9558a623a1b81cd9b44ace04 363 Gene3D G3DSA:3.40.50.300 4 278 1.1E-149 T 13-10-2018 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 Gene3D G3DSA:3.20.20.70 1 270 1.1E-86 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 Pfam PF00682 HMGL-like 7 265 2.5E-83 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 Gene3D G3DSA:1.10.238.260 273 381 8.3E-22 T 13-10-2018 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 194 207 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 SUPERFAMILY SSF51569 7 282 2.56E-82 T 13-10-2018 Thivi_4287 f9fe380bb4855656997509c95cbd5f5b 384 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 7 371 6.9E-159 T 13-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Gene3D G3DSA:1.10.10.60 402 452 3.5E-14 T 13-10-2018 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Pfam PF00072 Response regulator receiver domain 9 118 7.0E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 8.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 8.3E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Gene3D G3DSA:3.40.50.300 139 318 1.2E-67 T 13-10-2018 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 SMART SM00382 168 311 4.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4259 8504c859998da60c00930e834bc2a51f 453 SMART SM00448 6 120 4.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Pfam PF00158 Sigma-54 interaction domain 149 314 7.7E-71 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Gene3D G3DSA:3.40.50.2300 2 138 7.7E-25 T 13-10-2018 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 451 3.0E-215 T 13-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Pfam PF02954 Bacterial regulatory protein, Fis family 409 448 8.1E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 SUPERFAMILY SSF46689 361 450 1.25E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 SUPERFAMILY SSF52540 148 389 1.05E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4259 8504c859998da60c00930e834bc2a51f 453 Gene3D G3DSA:1.10.8.60 319 397 1.5E-22 T 13-10-2018 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_4259 8504c859998da60c00930e834bc2a51f 453 SUPERFAMILY SSF52172 7 193 8.25E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4259 8504c859998da60c00930e834bc2a51f 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_2622 ad8fa65ac740ff471fb21c2e5a4b62d8 311 SMART SM00382 29 212 4.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2622 ad8fa65ac740ff471fb21c2e5a4b62d8 311 Gene3D G3DSA:3.40.50.300 1 236 3.6E-64 T 13-10-2018 Thivi_2622 ad8fa65ac740ff471fb21c2e5a4b62d8 311 SUPERFAMILY SSF52540 3 231 1.09E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2622 ad8fa65ac740ff471fb21c2e5a4b62d8 311 Pfam PF00005 ABC transporter 20 164 2.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 PIRSF PIRSF006485 1 441 2.2E-168 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 1.6E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 344 3.4E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Hamap MF_00195 GTPase Der [der]. 2 436 37.648 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 SUPERFAMILY SSF52540 4 169 1.41E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 433 2.3E-27 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.6E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.6E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Gene3D G3DSA:3.40.50.300 2 162 2.5E-42 T 13-10-2018 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Pfam PF01926 50S ribosome-binding GTPase 179 297 5.8E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.6E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 433 5.7E-170 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Gene3D G3DSA:3.40.50.300 172 349 1.2E-48 T 13-10-2018 Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 SUPERFAMILY SSF52540 137 439 7.31E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2724 27fcac06d458e06e32ce2b58b911c3fc 465 Gene3D G3DSA:3.30.300.20 354 435 2.0E-22 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3998 f033cd625048260a76c48514d87fedae 510 SUPERFAMILY SSF53613 232 499 4.04E-72 T 13-10-2018 IPR029056 Ribokinase-like Thivi_3998 f033cd625048260a76c48514d87fedae 510 Gene3D G3DSA:3.40.50.10260 14 225 1.5E-58 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Thivi_3998 f033cd625048260a76c48514d87fedae 510 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 237 498 3.9E-65 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Thivi_3998 f033cd625048260a76c48514d87fedae 510 PIRSF PIRSF017184 15 505 1.5E-126 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Thivi_3998 f033cd625048260a76c48514d87fedae 510 Pfam PF01256 Carbohydrate kinase 257 493 1.1E-56 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Thivi_3998 f033cd625048260a76c48514d87fedae 510 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 21 219 5.6E-41 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Thivi_3998 f033cd625048260a76c48514d87fedae 510 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 219 24.32 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Thivi_3998 f033cd625048260a76c48514d87fedae 510 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 440 450 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Thivi_3998 f033cd625048260a76c48514d87fedae 510 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 504 22.209 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Thivi_3998 f033cd625048260a76c48514d87fedae 510 Gene3D G3DSA:3.40.1190.20 228 501 4.3E-83 T 13-10-2018 IPR029056 Ribokinase-like Thivi_3998 f033cd625048260a76c48514d87fedae 510 Pfam PF03853 YjeF-related protein N-terminus 40 198 8.9E-41 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Thivi_3998 f033cd625048260a76c48514d87fedae 510 SUPERFAMILY SSF64153 17 256 1.83E-58 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 34 3.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 1.2E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 4.2E-5 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 4.2E-5 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 Gene3D G3DSA:3.30.700.10 17 117 1.9E-8 T 13-10-2018 Thivi_0190 894f5e616bc9f730f1d5c97a0497bf6d 326 SUPERFAMILY SSF54523 16 98 3.61E-11 T 13-10-2018 Thivi_2081 0740b4ee17a73379b2122c48d42fbd81 225 Hamap MF_01385 Urease accessory protein UreF [ureF]. 7 225 31.674 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Thivi_2081 0740b4ee17a73379b2122c48d42fbd81 225 Pfam PF01730 UreF 39 182 2.0E-36 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Thivi_2081 0740b4ee17a73379b2122c48d42fbd81 225 PIRSF PIRSF009467 5 225 5.3E-61 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 Thivi_2081 0740b4ee17a73379b2122c48d42fbd81 225 Gene3D G3DSA:1.10.4190.10 5 203 3.5E-54 T 13-10-2018 IPR038277 UreF domain superfamily Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Gene3D G3DSA:3.30.1370.10 552 623 6.2E-20 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF55666 146 238 2.94E-27 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF55666 452 551 3.32E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF54211 5 145 9.62E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF03725 3' exoribonuclease family, domain 2 148 212 4.6E-7 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF03725 3' exoribonuclease family, domain 2 461 531 4.0E-5 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 322 1.0E-16 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 PIRSF PIRSF005499 4 698 2.1E-289 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF50249 622 696 7.01E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Gene3D G3DSA:3.30.230.70 235 551 1.4E-116 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Gene3D G3DSA:3.30.230.70 4 231 4.3E-73 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 2.9E-18 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 2.1E-23 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 693 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SMART SM00316 622 692 1.6E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SMART SM00322 554 619 3.3E-11 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF00575 S1 RNA binding domain 621 692 1.6E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF54791 556 641 1.52E-22 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF54211 296 490 2.63E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Gene3D G3DSA:2.40.50.140 624 695 3.6E-30 T 13-10-2018 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Pfam PF00013 KH domain 558 615 8.5E-10 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 SUPERFAMILY SSF46915 241 322 3.4E-16 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Thivi_3172 d244256b3eb89e5b9e1699264425f6b2 698 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 695 30.334 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 472 615 7.1E-29 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 709 836 3.32E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 834 960 5.41E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF52172 1640 1773 3.56E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 458 586 2.23E-27 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF13426 PAS domain 484 587 1.5E-14 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF47384 1244 1324 6.08E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 722 790 7.8E-15 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1258 1323 5.0E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00448 1646 1761 6.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00448 1500 1619 4.0E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF00072 Response regulator receiver domain 1502 1619 1.5E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF00072 Response regulator receiver domain 1649 1761 7.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 546 588 7.3E-11 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 420 461 240.0 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 926 968 9.7 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 1051 1093 18.0 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 796 838 9.3E-9 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 1178 1220 1.5E-7 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00086 668 710 0.078 T 13-10-2018 IPR001610 PAC motif Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00388 1258 1323 4.0E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.565.10 1322 1490 1.4E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55874 1312 1484 1.57E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 332 471 3.6E-20 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 469 595 4.6E-29 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 350 468 3.7E-7 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1102 1227 1.0E-19 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 976 1099 1.5E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 846 974 1.0E-13 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 593 716 4.4E-12 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 769 845 5.8E-9 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00387 1370 1486 9.8E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 1101 1221 5.0E-24 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 966 1091 1.05E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:2.10.70.100 793 840 8.6E-15 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF52172 1499 1627 8.97E-15 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 596 663 0.25 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 473 539 8.4E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 850 916 2.5E-5 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 348 414 1.5E-4 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 722 790 200.0 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 980 1045 2.6 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SMART SM00091 1105 1171 3.6E-11 T 13-10-2018 IPR000014 PAS domain Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 334 456 3.49E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 618 718 3.21E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 981 1091 4.0E-27 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08448 PAS fold 987 1095 2.1E-13 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08448 PAS fold 620 710 6.6E-9 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08448 PAS fold 355 463 2.8E-19 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08448 PAS fold 1111 1221 4.2E-13 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08448 PAS fold 858 968 6.8E-6 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 857 980 5.0E-18 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.30.450.20 616 721 2.7E-16 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:1.10.287.130 1222 1321 1.1E-27 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:1.20.120.160 1809 1900 1.8E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.40.50.2300 1497 1629 6.1E-14 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF08447 PAS fold 746 832 1.0E-13 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF47226 1744 1894 3.66E-8 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Gene3D G3DSA:3.40.50.12740 1645 1808 1.5E-37 T 13-10-2018 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1370 1485 2.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 SUPERFAMILY SSF55785 1090 1218 3.49E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1411 1425 1.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1429 1439 1.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1470 1483 1.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1720 bec8b361a158c1014e1e31c09f46b66b 1993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1446 1464 1.4E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 39 299 1.8E-85 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 PRINTS PR00091 Nitrogenase component II signature 64 79 2.4E-32 T 13-10-2018 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 PRINTS PR00091 Nitrogenase component II signature 157 172 2.4E-32 T 13-10-2018 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 PRINTS PR00091 Nitrogenase component II signature 42 55 2.4E-32 T 13-10-2018 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 PRINTS PR00091 Nitrogenase component II signature 119 133 2.4E-32 T 13-10-2018 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 SUPERFAMILY SSF52540 36 298 8.08E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2407 14b95810268dd88965e36fd366be0a13 302 TIGRFAM TIGR01281 DPOR_bchL: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 38 300 1.6E-134 T 13-10-2018 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 Hamap MF_00355 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein [bchL]. 37 302 52.761 T 13-10-2018 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein GO:0005524|GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 PIRSF PIRSF000363 35 302 7.4E-104 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 ProSitePatterns PS00692 NifH/frxC family signature 2. 158 171 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_2407 14b95810268dd88965e36fd366be0a13 302 Gene3D G3DSA:3.40.50.300 35 302 2.6E-64 T 13-10-2018 Thivi_2407 14b95810268dd88965e36fd366be0a13 302 ProSitePatterns PS00746 NifH/frxC family signature 1. 121 133 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_0022 36129eab7a0f14bf631e53cf032156bc 335 Gene3D G3DSA:3.30.160.60 303 333 3.7E-11 T 13-10-2018 Thivi_0022 36129eab7a0f14bf631e53cf032156bc 335 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 7 334 33.079 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Thivi_0022 36129eab7a0f14bf631e53cf032156bc 335 Gene3D G3DSA:1.10.8.1150 37 111 2.4E-10 T 13-10-2018 Thivi_0022 36129eab7a0f14bf631e53cf032156bc 335 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 331 7.0E-79 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Thivi_0022 36129eab7a0f14bf631e53cf032156bc 335 Pfam PF02618 YceG-like family 43 328 6.6E-79 T 13-10-2018 IPR003770 Endolytic murein transglycosylase Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 2 148 7.4E-45 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 SUPERFAMILY SSF55658 1 56 6.45E-17 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 3.7E-22 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 SUPERFAMILY SSF55653 60 147 2.22E-22 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 2 47 8.7E-19 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 Gene3D G3DSA:3.40.5.10 1 50 5.8E-20 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 Gene3D G3DSA:3.10.430.100 61 148 3.6E-24 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1182 46c89eff54268ca0d4c61ad45adccb79 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.039 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SMART SM00448 505 619 5.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Gene3D G3DSA:3.40.50.2300 492 633 1.1E-22 T 13-10-2018 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SUPERFAMILY SSF52172 504 626 3.98E-23 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SUPERFAMILY SSF55874 300 470 2.1E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 310 4.2E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 468 2.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SMART SM00388 246 310 7.3E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 8.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 8.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 8.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 8.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Gene3D G3DSA:3.30.565.10 315 474 7.4E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SUPERFAMILY SSF47384 231 311 1.31E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Gene3D G3DSA:1.10.287.130 209 308 1.9E-21 T 13-10-2018 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 Pfam PF00072 Response regulator receiver domain 508 617 3.6E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1437 4170fad16e9e0d8c42c6c789859c11b8 635 SMART SM00387 356 470 7.0E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0007 859b00d3937f22835a56792d01057653 782 Pfam PF12836 Helix-hairpin-helix motif 488 552 9.3E-23 T 13-10-2018 Thivi_0007 859b00d3937f22835a56792d01057653 782 Gene3D G3DSA:1.10.10.650 2 108 2.7E-39 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Thivi_0007 859b00d3937f22835a56792d01057653 782 SUPERFAMILY SSF50249 635 723 1.64E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0007 859b00d3937f22835a56792d01057653 782 Pfam PF09371 Tex-like protein N-terminal domain 8 192 1.7E-67 T 13-10-2018 IPR018974 Tex-like protein, N-terminal Thivi_0007 859b00d3937f22835a56792d01057653 782 Gene3D G3DSA:1.10.150.310 496 627 5.1E-46 T 13-10-2018 Thivi_0007 859b00d3937f22835a56792d01057653 782 Pfam PF00575 S1 RNA binding domain 646 717 1.9E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0007 859b00d3937f22835a56792d01057653 782 SMART SM00732 322 421 1.6E-30 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Thivi_0007 859b00d3937f22835a56792d01057653 782 Gene3D G3DSA:3.30.420.140 321 448 4.0E-147 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Thivi_0007 859b00d3937f22835a56792d01057653 782 Gene3D G3DSA:1.10.3500.10 111 495 4.0E-147 T 13-10-2018 IPR023323 Tex-like domain superfamily Thivi_0007 859b00d3937f22835a56792d01057653 782 Gene3D G3DSA:2.40.50.140 628 719 7.8E-29 T 13-10-2018 Thivi_0007 859b00d3937f22835a56792d01057653 782 SUPERFAMILY SSF47781 467 555 5.78E-24 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_0007 859b00d3937f22835a56792d01057653 782 Pfam PF16921 Tex protein YqgF-like domain 324 448 2.9E-49 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain Thivi_0007 859b00d3937f22835a56792d01057653 782 SMART SM00316 646 717 1.1E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0007 859b00d3937f22835a56792d01057653 782 SUPERFAMILY SSF158832 1 317 5.23E-113 T 13-10-2018 Thivi_0007 859b00d3937f22835a56792d01057653 782 SUPERFAMILY SSF47781 557 629 9.12E-20 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_0007 859b00d3937f22835a56792d01057653 782 SUPERFAMILY SSF53098 318 466 4.02E-47 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 Pfam PF01025 GrpE 69 223 1.5E-46 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 Hamap MF_01151 Protein GrpE [grpE]. 9 223 18.97 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 Gene3D G3DSA:3.90.20.20 66 166 9.1E-24 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 ProSitePatterns PS01071 grpE protein signature. 178 221 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 PRINTS PR00773 GrpE protein signature 202 221 5.4E-21 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 PRINTS PR00773 GrpE protein signature 120 135 5.4E-21 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 PRINTS PR00773 GrpE protein signature 175 190 5.4E-21 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 PRINTS PR00773 GrpE protein signature 92 108 5.4E-21 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 SUPERFAMILY SSF58014 71 167 7.98E-22 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 SUPERFAMILY SSF51064 169 223 3.79E-17 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Thivi_4596 d3a68ce4d042b63d75f44fa902452b29 226 Gene3D G3DSA:2.30.22.10 167 223 5.5E-23 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 SUPERFAMILY SSF54211 8 91 4.17E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 162 174 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 37 180 2.8E-64 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 Gene3D G3DSA:3.30.230.40 96 201 6.1E-39 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 67 80 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 SUPERFAMILY SSF54211 94 184 6.2E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 Gene3D G3DSA:3.30.230.40 1 95 1.8E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Thivi_2534 77b33fc7378672001b25ab22fcf6af5c 201 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 8 201 42.938 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Thivi_3455 00610dbd0c00691822b39b04640e716d 630 Gene3D G3DSA:3.20.20.540 214 526 3.4E-149 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Thivi_3455 00610dbd0c00691822b39b04640e716d 630 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 594 7.0E-212 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Thivi_3455 00610dbd0c00691822b39b04640e716d 630 Pfam PF01964 Radical SAM ThiC family 139 590 5.1E-197 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Thivi_3455 00610dbd0c00691822b39b04640e716d 630 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 595 97.565 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Thivi_3455 00610dbd0c00691822b39b04640e716d 630 Pfam PF13667 ThiC-associated domain 22 99 2.4E-34 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Hamap MF_01262 CCA-adding enzyme [cca]. 7 407 40.482 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 SUPERFAMILY SSF81891 127 365 1.27E-53 T 13-10-2018 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Gene3D G3DSA:1.10.3090.10 128 381 3.0E-38 T 13-10-2018 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Pfam PF01743 Poly A polymerase head domain 9 128 2.8E-19 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 SUPERFAMILY SSF81301 4 125 3.38E-29 T 13-10-2018 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 PIRSF PIRSF000813 7 413 3.6E-187 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Pfam PF01966 HD domain 237 312 3.4E-7 T 13-10-2018 IPR006674 HD domain Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Hamap MF_01261 Multifunctional CCA protein [cca]. 7 413 51.631 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 SMART SM00471 230 341 0.0011 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 155 217 7.1E-12 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Thivi_4232 bccefb1b34259fa4975558937fbea59c 422 Gene3D G3DSA:3.30.460.10 1 127 2.0E-27 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 583 643 1.6E-6 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 38 97 9.9E-6 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 1135 1192 3.0E-6 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 140 205 6.3E-7 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 1069 1125 2.8E-6 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF14559 Tetratricopeptide repeat 899 963 5.0E-9 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 446 503 2.2E-7 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 237 298 3.0E-5 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 771 819 8.0E-6 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 826 885 3.3E-4 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 374 433 3.0E-5 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Pfam PF13432 Tetratricopeptide repeat 510 570 0.005 T 13-10-2018 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Gene3D G3DSA:1.25.40.10 26 116 4.9E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 746 1220 2.9E-100 T 13-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 11 739 2.2E-150 T 13-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 766 1060 1.21E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 552 586 370.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 936 968 290.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 654 686 410.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 1072 1104 360.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 868 902 1100.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 518 550 250.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00386 970 1002 420.0 T 13-10-2018 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 137 367 2.43E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 603 820 2.78E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Gene3D G3DSA:1.25.40.10 443 748 3.9E-39 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Gene3D G3DSA:1.25.40.10 1016 1241 3.1E-36 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Gene3D G3DSA:1.25.40.10 749 1015 4.3E-44 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 Gene3D G3DSA:1.25.40.10 117 442 8.5E-46 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 33 114 1.72E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 1061 1239 3.6E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SUPERFAMILY SSF48452 330 572 2.47E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 368 401 94.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 300 333 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 854 887 26.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 1193 1226 240.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 1092 1125 8.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 1025 1058 29.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 504 537 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 266 299 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 640 673 54.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 198 230 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 130 163 46.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 402 435 0.0053 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 922 955 41.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 888 921 260.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 62 95 20.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 1159 1192 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 820 853 0.21 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 956 989 1.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 538 571 41.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 470 503 2.2E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 786 819 7.4E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 164 197 37.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 232 265 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4264 7b04f40308d03f3aebe104aa9849c2ad 1242 SMART SM00028 334 367 500.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.40.190.10 140 234 2.0E-77 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF55874 1159 1329 6.81E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF52172 1350 1481 3.56E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00086 786 828 2.6E-9 T 13-10-2018 IPR001610 PAC motif Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00086 1042 1085 0.0014 T 13-10-2018 IPR001610 PAC motif Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00086 905 945 22.0 T 13-10-2018 IPR001610 PAC motif Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF55785 942 1082 4.01E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.40.50.2300 1499 1628 1.3E-40 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF47384 1088 1170 1.53E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00062 56 278 4.1E-36 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF13188 PAS domain 841 875 0.002 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00388 1105 1170 2.1E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF52172 1498 1617 5.98E-37 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:1.10.287.130 1080 1168 1.7E-29 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 713 835 7.9E-23 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 955 1092 8.7E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF55785 723 824 2.97E-29 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF08447 PAS fold 981 1078 7.2E-17 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.30.450.20 956 1079 1.5E-26 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.30.565.10 1169 1334 2.5E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF00072 Response regulator receiver domain 1503 1612 1.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF00072 Response regulator receiver domain 1354 1470 1.5E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.40.190.10 47 274 2.0E-77 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF55785 826 943 9.77E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.40.50.12740 1351 1498 2.7E-37 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF53850 57 277 5.05E-49 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00091 714 784 8.5E-6 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00091 840 902 0.036 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00091 957 1035 5.9 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.30.450.20 709 849 6.8E-44 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1105 1170 1.3E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00387 1217 1334 6.4E-41 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SUPERFAMILY SSF47226 1597 1729 7.46E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:1.20.120.160 1641 1752 6.3E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00448 1501 1614 6.6E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 SMART SM00448 1352 1470 3.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF13426 PAS domain 725 827 8.9E-19 T 13-10-2018 IPR000014 PAS domain Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF01627 Hpt domain 1664 1740 9.2E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 276 1.3E-38 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Gene3D G3DSA:3.30.450.20 851 955 1.1E-10 T 13-10-2018 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1217 1332 2.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1294 1312 2.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1318 1331 2.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1259 1273 2.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1205 09f9470dec3cc7f3c2fd96dfcd27ebb3 1840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1277 1287 2.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2819 df1c0bc405bf5efeb15d88d7c54c8769 1224 Pfam PF12128 Protein of unknown function (DUF3584) 8 1196 0.0 T 13-10-2018 IPR021979 Protein of unknown function DUF3584 Thivi_2819 df1c0bc405bf5efeb15d88d7c54c8769 1224 SUPERFAMILY SSF52540 23 434 1.19E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3511 8cb6d52117cb5c57e19de607f9499172 156 Gene3D G3DSA:1.10.10.60 92 153 4.4E-11 T 13-10-2018 Thivi_3511 8cb6d52117cb5c57e19de607f9499172 156 SUPERFAMILY SSF46689 41 142 6.45E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3511 8cb6d52117cb5c57e19de607f9499172 156 Pfam PF08765 Mor transcription activator family 40 152 1.6E-18 T 13-10-2018 IPR014875 Mor transcription activator Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 SMART SM00382 50 233 2.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 Gene3D G3DSA:2.40.50.100 303 368 2.5E-6 T 13-10-2018 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 SUPERFAMILY SSF50331 259 380 7.37E-20 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 Gene3D G3DSA:2.40.50.140 261 302 2.5E-6 T 13-10-2018 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 Pfam PF00005 ABC transporter 42 183 3.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 SUPERFAMILY SSF52540 26 265 4.28E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 56 380 7.8E-126 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 Gene3D G3DSA:3.40.50.300 20 260 2.9E-71 T 13-10-2018 Thivi_3175 f21a6434d2e3d58af9e5599b5afcbabe 382 Pfam PF08402 TOBE domain 300 380 1.2E-16 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Thivi_1134 3c4394757ea723f3c5c0aded5eeb28d3 96 Gene3D G3DSA:3.30.70.100 1 96 1.7E-26 T 13-10-2018 Thivi_1134 3c4394757ea723f3c5c0aded5eeb28d3 96 ProSitePatterns PS00150 Acylphosphatase signature 1. 16 26 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_1134 3c4394757ea723f3c5c0aded5eeb28d3 96 Pfam PF00708 Acylphosphatase 12 93 1.9E-22 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_1134 3c4394757ea723f3c5c0aded5eeb28d3 96 SUPERFAMILY SSF54975 7 95 8.29E-25 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_0603 34064d5c60b0bfd7a08fff9df72e322d 327 Gene3D G3DSA:2.50.20.10 45 216 2.8E-49 T 13-10-2018 Thivi_0603 34064d5c60b0bfd7a08fff9df72e322d 327 Gene3D G3DSA:3.30.200.100 231 325 2.1E-14 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily Thivi_0603 34064d5c60b0bfd7a08fff9df72e322d 327 Pfam PF03888 MucB/RseB N-terminal domain 47 210 1.9E-54 T 13-10-2018 IPR033434 MucB/RseB, N-terminal Thivi_0603 34064d5c60b0bfd7a08fff9df72e322d 327 Pfam PF17188 MucB/RseB C-terminal domain 230 320 1.5E-20 T 13-10-2018 IPR033436 MucB/RseB, C-terminal Thivi_0603 34064d5c60b0bfd7a08fff9df72e322d 327 PIRSF PIRSF005427 15 327 2.8E-73 T 13-10-2018 IPR005588 MucB/RseB Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 6.4E-23 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 9.6E-85 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 5.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_0368 b4a6e6f78b20ad3fc702fe8537702b35 245 Pfam PF00813 FliP family 48 239 1.9E-78 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 SUPERFAMILY SSF49493 120 217 5.62E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 Pfam PF00226 DnaJ domain 5 66 1.0E-24 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 SMART SM00271 4 61 2.7E-26 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 PRINTS PR00625 DnaJ domain signature 7 25 7.2E-23 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 PRINTS PR00625 DnaJ domain signature 25 40 7.2E-23 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 PRINTS PR00625 DnaJ domain signature 41 61 7.2E-23 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 PRINTS PR00625 DnaJ domain signature 61 80 7.2E-23 T 13-10-2018 IPR001623 DnaJ domain Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 SUPERFAMILY SSF46565 1 109 3.79E-31 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 Gene3D G3DSA:1.10.287.110 2 121 1.5E-35 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 Gene3D G3DSA:2.60.260.20 204 281 1.1E-26 T 13-10-2018 Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 SUPERFAMILY SSF49493 210 292 8.76E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 Pfam PF01556 DnaJ C terminal domain 129 281 2.1E-34 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Thivi_3092 1e99bccbc6ff507eef988188382aca01 309 Gene3D G3DSA:2.60.260.20 122 203 7.6E-21 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 446 4.9E-16 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 320 9.9E-40 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.0E-40 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Gene3D G3DSA:3.50.50.60 147 262 1.2E-76 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Gene3D G3DSA:3.30.390.30 339 457 1.2E-36 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 SUPERFAMILY SSF55424 343 454 4.12E-23 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Gene3D G3DSA:3.50.50.60 7 323 1.2E-76 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 4.1E-17 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 4.1E-17 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.1E-17 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 4.1E-17 T 13-10-2018 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 Gene3D G3DSA:1.10.287.990 37 108 1.2E-76 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_0001 8083741193b1f38c80d330a5d9822021 470 SUPERFAMILY SSF51905 6 328 5.73E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0001 8083741193b1f38c80d330a5d9822021 470 PIRSF PIRSF000350 2 447 1.2E-52 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 1.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 1.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 77 95 1.1E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 Pfam PF02421 Ferrous iron transport protein B 6 163 3.0E-64 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 164 2.8E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 Pfam PF07664 Ferrous iron transport protein B C terminus 463 515 3.3E-23 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 Pfam PF07670 Nucleoside recognition 520 709 6.7E-34 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 Pfam PF07670 Nucleoside recognition 360 452 3.9E-14 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 706 8.6E-187 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 SUPERFAMILY SSF52540 5 169 7.65E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1961 62b61cfa04e9ee816866b98b723e8c9d 779 Gene3D G3DSA:3.40.50.300 3 179 7.5E-50 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 Pfam PF00117 Glutamine amidotransferase class-I 199 374 2.3E-46 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 377 1.1E-142 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 SUPERFAMILY SSF52021 4 137 1.26E-54 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00097 Anthranilate synthase component II signature 266 277 1.9E-5 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00097 Anthranilate synthase component II signature 351 364 1.9E-5 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00097 Anthranilate synthase component II signature 238 247 1.9E-5 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 SMART SM01097 3 133 2.5E-86 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 Gene3D G3DSA:3.40.50.880 152 380 5.0E-72 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 266 277 5.7E-11 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 247 5.7E-11 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 351 364 5.7E-11 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.6E-49 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 300 1.8E-39 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 266 282 1.8E-39 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 308 319 1.8E-39 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 196 210 1.8E-39 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 235 249 1.8E-39 T 13-10-2018 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 SUPERFAMILY SSF52317 153 380 4.43E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 380 48.359 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1770 60c1fc534ff0b19ba2943b139df7b38c 381 Gene3D G3DSA:3.50.30.20 2 151 1.2E-56 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 Pfam PF00575 S1 RNA binding domain 38 101 6.3E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 Gene3D G3DSA:3.40.1260.20 397 483 3.7E-6 T 13-10-2018 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 421 2.9E-155 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 Gene3D G3DSA:2.40.50.140 31 119 3.7E-28 T 13-10-2018 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 SUPERFAMILY SSF50249 39 119 1.62E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 SMART SM00316 37 114 4.2E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_4100 c1a6d2634c3b74f1ca50cc168016214f 484 Pfam PF10150 Ribonuclease E/G family 116 388 3.8E-100 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 Gene3D G3DSA:3.40.50.2000 256 468 7.0E-149 T 13-10-2018 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 SUPERFAMILY SSF53756 3 488 1.48E-106 T 13-10-2018 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 Gene3D G3DSA:3.40.50.2000 3 483 7.0E-149 T 13-10-2018 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 Pfam PF00534 Glycosyl transferases group 1 295 434 7.8E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 Hamap MF_00484 Glycogen synthase [glgA]. 1 486 38.745 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 Pfam PF08323 Starch synthase catalytic domain 2 242 1.1E-65 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_4486 55a5b1228d690076b278b1e2bde9b996 488 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 485 5.2E-153 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 Pfam PF05239 PRC-barrel domain 100 167 1.8E-7 T 13-10-2018 IPR027275 PRC-barrel domain Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 Gene3D G3DSA:2.30.30.240 103 172 5.0E-25 T 13-10-2018 Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 SUPERFAMILY SSF50447 13 97 6.83E-20 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 SUPERFAMILY SSF50346 103 172 1.73E-17 T 13-10-2018 IPR011033 PRC-barrel-like superfamily Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 13 171 8.7E-47 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 Gene3D G3DSA:2.40.30.60 3 97 7.5E-28 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 12 172 23.594 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Thivi_4318 3d1e05c559bf698f94b9f28544b0357c 172 Pfam PF01782 RimM N-terminal domain 14 94 1.1E-21 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Gene3D G3DSA:1.20.5.430 106 144 3.5E-12 T 13-10-2018 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Pfam PF08448 PAS fold 9 106 4.4E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Gene3D G3DSA:3.30.450.20 260 370 8.1E-16 T 13-10-2018 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 SMART SM00091 259 328 3.0 T 13-10-2018 IPR000014 PAS domain Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 SMART SM00091 134 202 0.027 T 13-10-2018 IPR000014 PAS domain Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Pfam PF02954 Bacterial regulatory protein, Fis family 407 445 1.1E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Gene3D G3DSA:3.30.450.20 8 105 1.4E-22 T 13-10-2018 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 2.2E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 2.2E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Pfam PF13188 PAS domain 135 176 3.3E-4 T 13-10-2018 IPR000014 PAS domain Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Pfam PF13188 PAS domain 262 296 0.061 T 13-10-2018 IPR000014 PAS domain Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 Gene3D G3DSA:1.10.10.60 389 451 2.4E-15 T 13-10-2018 Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 TIGRFAM TIGR02040 PpsR-CrtJ: transcriptional regulator PpsR 8 447 2.2E-135 T 13-10-2018 IPR011785 Transcription regulator PpsR Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 SUPERFAMILY SSF55785 126 213 2.27E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2360 e9616b3af26d57cb9bc142f99d8bf65c 460 SUPERFAMILY SSF46689 380 448 2.33E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1998 be569690aeb605a02f0beacb020c7f27 365 SUPERFAMILY SSF48695 22 333 1.36E-119 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1998 be569690aeb605a02f0beacb020c7f27 365 PIRSF PIRSF000017 1 339 1.0E-159 T 13-10-2018 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 Thivi_1998 be569690aeb605a02f0beacb020c7f27 365 Pfam PF02276 Photosynthetic reaction centre cytochrome C subunit 24 331 1.2E-147 T 13-10-2018 IPR003158 Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 Thivi_1998 be569690aeb605a02f0beacb020c7f27 365 Gene3D G3DSA:1.10.468.10 64 330 8.2E-125 T 13-10-2018 IPR023119 Multihaem cytochrome, PRC subunit superfamily Thivi_1998 be569690aeb605a02f0beacb020c7f27 365 Gene3D G3DSA:1.10.468.10 163 315 8.2E-125 T 13-10-2018 IPR023119 Multihaem cytochrome, PRC subunit superfamily Thivi_3980 6153bf45e05a56bc0cc701c994bd1f11 451 Pfam PF03065 Glycosyl hydrolase family 57 86 318 1.7E-24 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Thivi_3980 6153bf45e05a56bc0cc701c994bd1f11 451 Gene3D G3DSA:3.20.110.20 2 332 6.8E-50 T 13-10-2018 Thivi_3980 6153bf45e05a56bc0cc701c994bd1f11 451 SUPERFAMILY SSF88713 4 300 3.78E-49 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 554 5.0E-228 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 2.3E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 222 2.3E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 2.3E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 57 2.3E-10 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 SUPERFAMILY SSF52374 29 348 1.71E-96 T 13-10-2018 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 343 532 4.1E-58 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Gene3D G3DSA:3.40.50.620 29 249 4.4E-98 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Gene3D G3DSA:3.90.800.10 102 211 4.4E-98 T 13-10-2018 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 339 4.7E-106 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 552 52.54 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Gene3D G3DSA:2.40.240.10 350 467 6.8E-78 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Gene3D G3DSA:1.10.1160.10 263 341 7.5E-35 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 SUPERFAMILY SSF50715 342 550 5.23E-67 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_2430 f8a755e05379fcdb9d126f9cc56d4939 557 Gene3D G3DSA:2.40.240.10 343 549 6.8E-78 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 SUPERFAMILY SSF57716 223 274 2.54E-16 T 13-10-2018 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Gene3D G3DSA:1.10.8.50 137 275 2.2E-43 T 13-10-2018 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 SUPERFAMILY SSF81624 2 140 4.06E-41 T 13-10-2018 IPR035937 MutM-like, N-terminal Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 SUPERFAMILY SSF46946 136 228 2.21E-29 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 275 43.714 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 SMART SM00898 2 116 6.4E-51 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Pfam PF06827 Zinc finger found in FPG and IleRS 247 275 3.4E-8 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 274 1.9E-87 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 3.2E-32 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 135 224 5.6E-24 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 250 274 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 SMART SM01232 135 227 2.7E-46 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Thivi_3676 8bb440e0d0e267531c9be4a2d8442092 275 Gene3D G3DSA:3.20.190.10 2 131 4.9E-39 T 13-10-2018 IPR035937 MutM-like, N-terminal Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF08448 PAS fold 393 486 8.0E-7 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF08448 PAS fold 503 615 3.3E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00091 625 693 0.014 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00091 373 439 3.8E-6 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00091 496 566 0.077 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00091 753 818 0.0056 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00388 887 952 1.1E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF03924 CHASE domain 77 268 1.2E-63 T 13-10-2018 IPR006189 CHASE domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF13188 PAS domain 753 808 1.3E-5 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00387 999 1115 4.5E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF55785 481 611 1.01E-15 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.565.10 953 1118 5.3E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF55785 365 482 1.27E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:2.10.70.100 698 741 1.2E-8 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF47384 872 953 7.46E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM01079 74 270 6.1E-78 T 13-10-2018 IPR006189 CHASE domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.450.20 487 619 6.1E-18 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:1.10.287.130 870 950 3.1E-27 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 671 748 1.4E-8 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 620 9.5E-9 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 491 4.8E-16 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 749 879 1.5E-9 T 13-10-2018 IPR000014 PAS domain Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.450.20 622 691 3.4E-17 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.450.350 78 284 1.4E-37 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF08447 PAS fold 649 735 3.3E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00086 444 484 10.0 T 13-10-2018 IPR001610 PAC motif Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00086 699 741 1.4E-4 T 13-10-2018 IPR001610 PAC motif Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SMART SM00086 833 874 19.0 T 13-10-2018 IPR001610 PAC motif Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 999 1114 1.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF55785 610 739 2.27E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF55874 941 1112 1.31E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Pfam PF00512 His Kinase A (phospho-acceptor) domain 888 951 2.9E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.450.20 361 482 4.0E-18 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 Gene3D G3DSA:3.30.450.20 742 869 4.7E-17 T 13-10-2018 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1040 1054 8.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1075 1093 8.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1099 1112 8.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1058 1068 8.8E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4019 84269c5df1f6b892ea968ff08f578105 1243 SUPERFAMILY SSF55785 738 872 2.44E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Gene3D G3DSA:3.50.30.10 9 240 8.3E-62 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 SUPERFAMILY SSF51621 257 556 6.81E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 456 471 2.6E-27 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 300 319 2.6E-27 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 509 521 2.6E-27 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 473 488 2.6E-27 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 PIRSF PIRSF000732 1 580 2.6E-190 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 SUPERFAMILY SSF52009 117 239 4.84E-28 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 SUPERFAMILY SSF47831 34 148 1.31E-26 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 232 4.9E-21 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Gene3D G3DSA:3.20.20.60 241 579 2.2E-106 T 13-10-2018 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 259 548 1.9E-99 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 34 562 5.4E-138 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Pfam PF05524 PEP-utilising enzyme, N-terminal 9 131 2.4E-24 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 Gene3D G3DSA:1.10.274.10 26 151 8.3E-62 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_2242 3e05a32b969126e75fa9cb6f1ae41b81 580 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 456 474 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 138 304 5.0E-66 T 13-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 SUPERFAMILY SSF52141 127 306 4.91E-65 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 SMART SM00986 152 300 2.3E-45 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 SMART SM00987 152 300 2.3E-45 T 13-10-2018 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 Gene3D G3DSA:3.40.470.10 126 311 1.7E-72 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_3772 f18f1484254f54c126c7a2b79cda72b8 312 Pfam PF03167 Uracil DNA glycosylase superfamily 152 299 2.2E-47 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:2.40.40.20 707 799 1.1E-5 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:3.10.20.740 4 131 1.9E-38 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Pfam PF00384 Molybdopterin oxidoreductase 572 643 7.1E-13 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Pfam PF00384 Molybdopterin oxidoreductase 279 435 4.8E-15 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:3.30.70.20 132 211 5.9E-10 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 83 5.3E-16 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 SUPERFAMILY SSF50692 725 782 2.26E-5 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 SUPERFAMILY SSF53706 220 668 2.54E-84 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 105 117 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 SUPERFAMILY SSF54862 83 217 4.6E-40 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:3.40.228.10 348 420 9.1E-14 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 7 643 6.6E-188 T 13-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:3.40.50.740 461 676 4.3E-24 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Gene3D G3DSA:3.40.50.740 287 347 9.1E-14 T 13-10-2018 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 SMART SM00929 90 130 2.6E-19 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 34 51 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 124 2.2E-16 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 152 162 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3918 fde36e2fe5d7d5b3c2db01b34903959a 807 SUPERFAMILY SSF54292 5 81 7.64E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_3821 cf299bcc2fb826b998185253af750ff0 396 Pfam PF07995 Glucose / Sorbosone dehydrogenase 56 390 3.0E-128 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Thivi_3821 cf299bcc2fb826b998185253af750ff0 396 SUPERFAMILY SSF50952 44 392 2.48E-49 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Thivi_3821 cf299bcc2fb826b998185253af750ff0 396 Gene3D G3DSA:2.120.10.30 43 394 5.2E-118 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Gene3D G3DSA:3.40.120.10 1 188 1.3E-76 T 13-10-2018 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 148 1.8E-34 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 271 286 1.2E-21 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 225 1.2E-21 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 255 1.2E-21 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 1.2E-21 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Gene3D G3DSA:3.40.120.10 292 389 2.2E-38 T 13-10-2018 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Gene3D G3DSA:3.30.310.50 390 544 1.7E-56 T 13-10-2018 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 185 287 1.4E-11 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 SUPERFAMILY SSF53738 2 199 1.85E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 SUPERFAMILY SSF53738 183 293 2.04E-28 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 SUPERFAMILY SSF55957 410 544 6.28E-46 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 SUPERFAMILY SSF53738 279 415 1.22E-37 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Gene3D G3DSA:3.40.120.10 189 291 3.4E-36 T 13-10-2018 Thivi_0618 5c3a7a29a9118537511bb760f35694a0 544 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 295 408 4.2E-31 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0318 545e69611350fc1169e815b489511725 289 SMART SM00138 28 287 6.9E-89 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 Gene3D G3DSA:1.10.155.10 17 94 8.7E-27 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 246 269 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 156 172 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 124 144 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 50 63 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 89 101 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 PRINTS PR00996 Glutamate methyltransferase family signature 227 241 4.8E-40 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0318 545e69611350fc1169e815b489511725 289 SUPERFAMILY SSF53335 96 281 1.27E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0318 545e69611350fc1169e815b489511725 289 PIRSF PIRSF000410 10 288 4.8E-96 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_0318 545e69611350fc1169e815b489511725 289 Pfam PF03705 CheR methyltransferase, all-alpha domain 29 78 4.8E-19 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_0318 545e69611350fc1169e815b489511725 289 Pfam PF01739 CheR methyltransferase, SAM binding domain 96 280 3.7E-50 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0318 545e69611350fc1169e815b489511725 289 SUPERFAMILY SSF47757 20 95 7.06E-22 T 13-10-2018 Thivi_0318 545e69611350fc1169e815b489511725 289 Gene3D G3DSA:3.40.50.150 95 287 2.7E-54 T 13-10-2018 Thivi_0181 ed8556704afd7de8e18827c02562850c 726 PRINTS PR00811 Bacterial general secretion pathway protein D signature 279 289 3.9E-12 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_0181 ed8556704afd7de8e18827c02562850c 726 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 529 3.9E-12 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_0181 ed8556704afd7de8e18827c02562850c 726 PRINTS PR00811 Bacterial general secretion pathway protein D signature 357 381 3.9E-12 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_0181 ed8556704afd7de8e18827c02562850c 726 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 548 3.9E-12 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_0181 ed8556704afd7de8e18827c02562850c 726 Gene3D G3DSA:3.55.50.30 20 127 1.3E-10 T 13-10-2018 Thivi_0181 ed8556704afd7de8e18827c02562850c 726 Pfam PF11920 Protein of unknown function (DUF3438) 606 717 2.4E-12 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 Thivi_0181 ed8556704afd7de8e18827c02562850c 726 Pfam PF00263 Bacterial type II and III secretion system protein 362 545 9.8E-37 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Thivi_3315 714999185fd81ee507922610871ea2ea 430 SUPERFAMILY SSF51556 60 367 8.88E-89 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_3315 714999185fd81ee507922610871ea2ea 430 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 27 428 4.1E-94 T 13-10-2018 Thivi_3315 714999185fd81ee507922610871ea2ea 430 Gene3D G3DSA:3.20.20.140 61 372 5.3E-117 T 13-10-2018 Thivi_3315 714999185fd81ee507922610871ea2ea 430 Pfam PF01979 Amidohydrolase family 56 425 2.0E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Thivi_3315 714999185fd81ee507922610871ea2ea 430 SUPERFAMILY SSF51338 7 428 4.04E-27 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_3315 714999185fd81ee507922610871ea2ea 430 Gene3D G3DSA:2.30.40.10 13 425 5.3E-117 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 SUPERFAMILY SSF51161 3 170 7.21E-56 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.3E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 1.9E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.4E-76 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 Gene3D G3DSA:2.160.10.10 67 188 3.3E-37 T 13-10-2018 Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 Gene3D G3DSA:1.10.3130.10 1 66 7.7E-24 T 13-10-2018 Thivi_3143 ce11323fbb78207f0c3a202ec02b3d31 265 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Gene3D G3DSA:3.40.50.10750 511 664 3.5E-143 T 13-10-2018 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 387 688 9.7E-128 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Gene3D G3DSA:3.40.50.10950 378 691 3.5E-143 T 13-10-2018 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Pfam PF07085 DRTGG domain 212 326 4.0E-28 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 PIRSF PIRSF006107 1 696 1.8E-186 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Pfam PF13500 AAA domain 2 200 8.7E-20 T 13-10-2018 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 SUPERFAMILY SSF75138 207 332 1.73E-25 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 SUPERFAMILY SSF52540 1 215 3.36E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Pfam PF01515 Phosphate acetyl/butaryl transferase 371 688 4.4E-129 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Gene3D G3DSA:3.40.1390.20 206 348 5.3E-28 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 Gene3D G3DSA:3.40.50.300 4 205 6.6E-13 T 13-10-2018 Thivi_0492 aa0d3d029054ec95652f9d7b276c7372 703 SUPERFAMILY SSF53659 371 691 3.29E-98 T 13-10-2018 Thivi_3214 ca06d95739be016ea40d7f8066c833d0 652 Pfam PF02080 TrkA-C domain 371 442 2.7E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_3214 ca06d95739be016ea40d7f8066c833d0 652 Gene3D G3DSA:3.30.70.1450 367 445 4.5E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3214 ca06d95739be016ea40d7f8066c833d0 652 Pfam PF03600 Citrate transporter 46 600 1.2E-47 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Thivi_3214 ca06d95739be016ea40d7f8066c833d0 652 SUPERFAMILY SSF116726 362 448 3.53E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3214 ca06d95739be016ea40d7f8066c833d0 652 SUPERFAMILY SSF116726 274 349 3.01E-5 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 Gene3D G3DSA:3.30.450.40 15 161 2.4E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 Pfam PF07730 Histidine kinase 162 225 1.3E-9 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 SMART SM00387 265 361 1.7E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 4.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 4.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 4.6E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 SUPERFAMILY SSF55874 228 358 1.31E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 Gene3D G3DSA:3.30.565.10 232 360 4.6E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 359 1.0E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 SUPERFAMILY SSF55781 20 144 1.74E-9 T 13-10-2018 Thivi_3719 d008f4b9b3934a4b0851a3400a1d4bd4 367 Pfam PF13185 GAF domain 10 136 4.5E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 SUPERFAMILY SSF82689 1042 1137 3.79E-22 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 SUPERFAMILY SSF50182 972 1037 2.06E-17 T 13-10-2018 IPR010920 LSM domain superfamily Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 531 868 3.0E-99 T 13-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 SUPERFAMILY SSF82861 889 970 1.44E-6 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 Pfam PF00924 Mechanosensitive ion channel 929 1126 3.2E-51 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 Gene3D G3DSA:2.30.30.60 987 1036 9.7E-12 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 Pfam PF12795 Mechanosensitive ion channel porin domain 65 306 1.7E-41 T 13-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain Thivi_3576 92cb712d4a940ac01dfc94ecdf9ccda9 1165 Gene3D G3DSA:3.30.70.100 1039 1132 1.6E-18 T 13-10-2018 Thivi_1474 5b1b42f46a399904591344cf9a7ffa30 424 Gene3D G3DSA:3.30.565.60 259 408 7.7E-37 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily Thivi_1474 5b1b42f46a399904591344cf9a7ffa30 424 Gene3D G3DSA:3.30.950.30 2 137 1.3E-20 T 13-10-2018 IPR038461 Schlafen, AAA domain superfamily Thivi_1474 5b1b42f46a399904591344cf9a7ffa30 424 Pfam PF04326 Putative DNA-binding domain 14 129 2.0E-15 T 13-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Thivi_1474 5b1b42f46a399904591344cf9a7ffa30 424 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 321 405 5.8E-18 T 13-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Thivi_3619 cc334e64d6264e557759347b4e870036 1148 SUPERFAMILY SSF56801 618 1147 1.2E-105 T 13-10-2018 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Gene3D G3DSA:1.20.1250.20 7 410 1.5E-25 T 13-10-2018 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Pfam PF01553 Acyltransferase 432 553 3.7E-22 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Pfam PF00501 AMP-binding enzyme 628 1047 3.0E-79 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Pfam PF07690 Major Facilitator Superfamily 26 374 1.4E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 SUPERFAMILY SSF69593 398 591 1.7E-25 T 13-10-2018 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Gene3D G3DSA:3.40.50.12780 620 1047 5.4E-92 T 13-10-2018 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 ProSitePatterns PS00455 Putative AMP-binding domain signature. 791 802 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_3619 cc334e64d6264e557759347b4e870036 1148 SUPERFAMILY SSF103473 13 415 1.11E-27 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_3619 cc334e64d6264e557759347b4e870036 1148 Gene3D G3DSA:3.30.300.30 1049 1146 2.2E-7 T 13-10-2018 Thivi_3619 cc334e64d6264e557759347b4e870036 1148 SMART SM00563 446 558 1.2E-28 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 SUPERFAMILY SSF56808 6 226 1.83E-79 T 13-10-2018 IPR023674 Ribosomal protein L1-like Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 1.4E-103 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 1.6E-50 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 PIRSF PIRSF002155 1 227 1.5E-75 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.042 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 Gene3D G3DSA:3.30.190.20 25 221 1.1E-77 T 13-10-2018 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4191 4111c1fa4896e437a04ca821c83ab39b 230 Gene3D G3DSA:3.40.50.790 68 159 1.1E-77 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Thivi_3804 f8416a12a277909c1b1dddee9ccd0373 127 Gene3D G3DSA:1.10.760.10 25 127 1.2E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3804 f8416a12a277909c1b1dddee9ccd0373 127 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 52 127 6.3E-25 T 13-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX Thivi_3804 f8416a12a277909c1b1dddee9ccd0373 127 SUPERFAMILY SSF46626 11 127 1.03E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3804 f8416a12a277909c1b1dddee9ccd0373 127 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 124 2.7E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 SUPERFAMILY SSF52540 5 334 2.04E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 Pfam PF00437 Type II/IV secretion system protein 12 270 3.9E-46 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 Gene3D G3DSA:3.40.50.300 101 345 2.3E-107 T 13-10-2018 Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 7.9E-155 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 SMART SM00382 122 288 0.0093 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3317 aaab9e345034d59282f6a39b80c03a57 345 Gene3D G3DSA:3.30.450.90 1 100 8.0E-36 T 13-10-2018 Thivi_0638 65450ae01ea2b7a33e948775ad5c31bd 327 SMART SM00327 87 288 1.0E-22 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_0638 65450ae01ea2b7a33e948775ad5c31bd 327 SUPERFAMILY SSF53300 85 266 6.08E-40 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0638 65450ae01ea2b7a33e948775ad5c31bd 327 Gene3D G3DSA:3.40.50.410 87 288 6.8E-58 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0638 65450ae01ea2b7a33e948775ad5c31bd 327 Pfam PF00092 von Willebrand factor type A domain 89 281 8.5E-28 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 Gene3D G3DSA:3.40.190.80 149 265 1.2E-18 T 13-10-2018 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 4.9E-24 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 Gene3D G3DSA:3.30.540.10 5 145 3.0E-38 T 13-10-2018 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 Pfam PF00459 Inositol monophosphatase family 11 258 1.3E-45 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Thivi_2630 b1850831137ced62bd00fc0d3b4fdd58 270 SUPERFAMILY SSF56655 6 263 7.85E-62 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Pfam PF02954 Bacterial regulatory protein, Fis family 423 461 1.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SUPERFAMILY SSF46689 386 463 7.62E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Gene3D G3DSA:3.30.450.20 270 384 1.7E-26 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SMART SM00091 274 343 0.0065 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SMART SM00091 17 83 7.0 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SMART SM00091 153 220 1.0E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Gene3D G3DSA:1.20.5.430 125 156 2.7E-10 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Gene3D G3DSA:3.30.450.20 157 258 1.2E-7 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.4E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.4E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Gene3D G3DSA:1.10.10.60 385 464 1.0E-12 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 226 3.6E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 391 4.0E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Pfam PF00989 PAS fold 275 383 7.5E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SUPERFAMILY SSF55785 152 247 3.35E-12 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 TIGRFAM TIGR02040 PpsR-CrtJ: transcriptional regulator PpsR 22 463 2.4E-156 T 13-10-2018 IPR011785 Transcription regulator PpsR Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Gene3D G3DSA:3.30.450.20 4 124 4.0E-34 T 13-10-2018 Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 Pfam PF13188 PAS domain 154 206 5.2E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2412 961630331c358e22d6dea1bcd484c1f5 485 SUPERFAMILY SSF55785 266 383 2.97E-11 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Gene3D G3DSA:3.40.30.10 219 301 1.6E-15 T 13-10-2018 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Gene3D G3DSA:2.170.150.20 302 420 2.4E-44 T 13-10-2018 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 SUPERFAMILY SSF52833 221 299 3.51E-7 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Pfam PF01641 SelR domain 303 417 5.3E-39 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Pfam PF01625 Peptide methionine sulfoxide reductase 27 189 5.7E-56 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 24 195 33.903 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 SUPERFAMILY SSF55068 16 197 2.88E-63 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 SUPERFAMILY SSF51316 302 419 3.24E-46 T 13-10-2018 IPR011057 Mss4-like superfamily Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Gene3D G3DSA:3.30.1060.10 14 204 3.0E-71 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 302 419 1.6E-41 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 Pfam PF13098 Thioredoxin-like domain 219 299 2.0E-6 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_3791 c21d90bddf17aee04bfda03770d2cf54 420 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 25 189 2.5E-50 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 SUPERFAMILY SSF51905 19 474 1.08E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 Gene3D G3DSA:3.50.50.60 20 469 9.0E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 Gene3D G3DSA:3.90.700.10 254 410 9.0E-84 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 20 475 1.0E-163 T 13-10-2018 IPR012831 Precorrin 3B synthase CobZ Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 SUPERFAMILY SSF56425 268 414 8.02E-20 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_1678 515746a46e7deea0a8c51c3293a4b4f3 475 Pfam PF00890 FAD binding domain 20 440 7.0E-32 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Gene3D G3DSA:1.10.238.260 282 395 7.7E-36 T 13-10-2018 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 SUPERFAMILY SSF51569 2 291 7.14E-102 T 13-10-2018 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 7 500 1.4E-222 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 503 1.7E-36 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 SUPERFAMILY SSF110921 395 502 9.68E-25 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Gene3D G3DSA:3.20.20.70 4 278 2.0E-111 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 SMART SM00917 372 503 3.3E-41 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Gene3D G3DSA:3.30.160.270 396 503 1.7E-10 T 13-10-2018 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Pfam PF00682 HMGL-like 7 275 1.3E-101 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_3771 d3fa577a202cd2455bf8786b9678f5e4 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 512 44.48 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 SUPERFAMILY SSF46689 273 326 2.6E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 2.9E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 2.9E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 SMART SM00342 238 323 6.1E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 Pfam PF14525 AraC-binding-like domain 46 201 1.3E-11 T 13-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 Pfam PF12833 Helix-turn-helix domain 244 324 1.9E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Thivi_3487 44072b5cd6a31cc91052e835981e294c 337 Gene3D G3DSA:1.10.10.60 219 332 1.2E-28 T 13-10-2018 Thivi_1778 0021f2ea2cdb5ae2959a9ab8603303e8 215 Pfam PF01991 ATP synthase (E/31 kDa) subunit 11 202 4.7E-19 T 13-10-2018 IPR002842 V-type ATPase subunit E GO:0015991|GO:0033178|GO:0046961 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1778 0021f2ea2cdb5ae2959a9ab8603303e8 215 SUPERFAMILY SSF160527 82 202 6.54E-17 T 13-10-2018 Thivi_1778 0021f2ea2cdb5ae2959a9ab8603303e8 215 Gene3D G3DSA:3.30.2320.30 81 203 8.5E-18 T 13-10-2018 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 SMART SM01068 1 51 0.019 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 SMART SM01068 311 380 1.6E-28 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Pfam PF06165 Glycosyltransferase family 36 338 582 2.1E-74 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Pfam PF06165 Glycosyltransferase family 36 19 258 2.4E-66 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 613 1040 4.1E-119 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Gene3D G3DSA:2.70.98.40 4 285 3.4E-69 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Gene3D G3DSA:2.70.98.40 312 618 3.9E-91 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 SUPERFAMILY SSF74650 11 260 2.2E-63 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 SUPERFAMILY SSF48208 591 1097 1.82E-92 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Gene3D G3DSA:2.60.420.10 622 1095 1.2E-187 T 13-10-2018 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 SUPERFAMILY SSF74650 311 582 8.16E-77 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_0740 0b2fe78a9b5548b3acc28631d8cf8e98 1120 Gene3D G3DSA:1.50.10.10 627 1040 1.2E-187 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 Pfam PF02384 N-6 DNA Methylase 138 450 2.1E-102 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 74 456 1.4E-73 T 13-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 Pfam PF12161 HsdM N-terminal domain 8 125 1.8E-16 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 Gene3D G3DSA:3.40.50.150 138 435 9.1E-90 T 13-10-2018 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 SUPERFAMILY SSF53335 6 489 4.72E-127 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 Gene3D G3DSA:1.20.1260.30 1 53 9.8E-17 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 302 326 1.7E-21 T 13-10-2018 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 203 1.7E-21 T 13-10-2018 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 161 177 1.7E-21 T 13-10-2018 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 265 277 1.7E-21 T 13-10-2018 Thivi_2874 da1ae6cbdd7c64edaae598e8c18f91e8 797 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 268 274 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_2720 e2ec2fc6d82886f3cb2de3cd9190ad3a 497 SMART SM00382 22 363 0.0019 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2720 e2ec2fc6d82886f3cb2de3cd9190ad3a 497 SUPERFAMILY SSF52540 10 379 6.63E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2720 e2ec2fc6d82886f3cb2de3cd9190ad3a 497 Pfam PF05872 Bacterial protein of unknown function (DUF853) 8 495 3.2E-221 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal Thivi_2720 e2ec2fc6d82886f3cb2de3cd9190ad3a 497 Gene3D G3DSA:3.40.50.300 8 140 1.7E-10 T 13-10-2018 Thivi_2720 e2ec2fc6d82886f3cb2de3cd9190ad3a 497 Gene3D G3DSA:3.40.50.300 180 383 1.8E-20 T 13-10-2018 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 SMART SM00359 283 366 9.9E-16 T 13-10-2018 IPR002478 PUA domain GO:0003723 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 SUPERFAMILY SSF53633 11 262 1.06E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 1.1E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 1.1E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 1.1E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 1.1E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 1.1E-53 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 373 1.8E-131 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 Pfam PF01472 PUA domain 283 357 7.0E-21 T 13-10-2018 IPR002478 PUA domain GO:0003723 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 Gene3D G3DSA:2.30.130.10 272 374 8.9E-34 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 SUPERFAMILY SSF88697 282 373 2.87E-23 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 Gene3D G3DSA:3.40.1160.10 1 266 7.7E-92 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 Pfam PF00696 Amino acid kinase family 12 240 5.7E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 269 36.708 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_2542 20481c51e7bbc0027a21bc4d59f0a526 374 PIRSF PIRSF000729 6 374 4.1E-130 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Thivi_4118 f189e6eb298a76821f57e195769f15e9 180 SMART SM00260 21 162 1.6E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_4118 f189e6eb298a76821f57e195769f15e9 180 SUPERFAMILY SSF50341 22 164 2.49E-34 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_4118 f189e6eb298a76821f57e195769f15e9 180 Gene3D G3DSA:2.40.50.180 44 157 1.1E-35 T 13-10-2018 Thivi_4118 f189e6eb298a76821f57e195769f15e9 180 Pfam PF01584 CheW-like domain 25 163 1.0E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_4118 f189e6eb298a76821f57e195769f15e9 180 Gene3D G3DSA:2.30.30.40 27 156 1.1E-35 T 13-10-2018 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 Pfam PF00072 Response regulator receiver domain 7 116 8.0E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 Gene3D G3DSA:1.10.10.10 134 198 3.6E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 3.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 3.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 3.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 4.1E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 SUPERFAMILY SSF52172 4 153 5.41E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 Gene3D G3DSA:3.40.50.2300 1 131 1.4E-48 T 13-10-2018 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 SMART SM00421 140 197 2.5E-24 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 SUPERFAMILY SSF46894 134 198 1.84E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0850 7138657ea65708ac66f28800b4fcea36 206 SMART SM00448 5 116 1.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2064 54945540ac065179514211eb182c40c4 346 Gene3D G3DSA:3.40.50.410 99 300 5.4E-49 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2064 54945540ac065179514211eb182c40c4 346 SMART SM00327 98 300 1.7E-21 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2064 54945540ac065179514211eb182c40c4 346 SUPERFAMILY SSF53300 96 295 8.31E-35 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2064 54945540ac065179514211eb182c40c4 346 Pfam PF00092 von Willebrand factor type A domain 100 293 1.2E-25 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2281 594956d4cdd0021f519875527eccbe9b 104 SUPERFAMILY SSF51182 11 103 2.74E-34 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_2281 594956d4cdd0021f519875527eccbe9b 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 3.1E-37 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Thivi_2281 594956d4cdd0021f519875527eccbe9b 104 Gene3D G3DSA:2.60.120.10 1 103 1.4E-40 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_2281 594956d4cdd0021f519875527eccbe9b 104 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 27.769 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Thivi_2964 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2665 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2644 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0473 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3341 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0722 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2941 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2949 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0720 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2893 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0446 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4031 75b86716e920069f8b0186fa84a55911 351 SUPERFAMILY SSF53098 30 309 1.9E-18 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3956 447501ccd378ee025b07c31c45d17e9e 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 166 379 1.9E-31 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_3956 447501ccd378ee025b07c31c45d17e9e 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 300 1.8E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_3956 447501ccd378ee025b07c31c45d17e9e 388 SUPERFAMILY SSF111369 47 304 8.5E-11 T 13-10-2018 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 Pfam PF00156 Phosphoribosyl transferase domain 268 393 1.2E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 5.7E-155 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 Pfam PF13522 Glutamine amidotransferase domain 63 208 3.0E-15 T 13-10-2018 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 SUPERFAMILY SSF56235 2 257 6.35E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 SUPERFAMILY SSF53271 250 484 4.85E-70 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 PIRSF PIRSF000485 1 481 2.0E-156 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 Gene3D G3DSA:3.40.50.2020 277 440 2.8E-148 T 13-10-2018 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.166 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Thivi_0656 8d3dc567f7b767ddaac6e2256a9d7592 504 Gene3D G3DSA:3.60.20.10 2 412 2.8E-148 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 SUPERFAMILY SSF51905 6 447 4.8E-69 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 519 5.0E-198 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 SUPERFAMILY SSF46977 424 527 1.24E-29 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 SUPERFAMILY SSF56425 237 352 1.17E-43 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 Gene3D G3DSA:3.90.700.10 247 357 2.5E-154 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 524 1.2E-13 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 376 4.3E-7 T 13-10-2018 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.3E-7 T 13-10-2018 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 Gene3D G3DSA:1.20.58.100 424 540 1.5E-40 T 13-10-2018 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 Gene3D G3DSA:3.50.50.60 9 402 2.5E-154 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 Pfam PF00890 FAD binding domain 9 391 2.1E-98 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_0600 a01ba0d12bf56eae5ccf704037ddd72e 541 PIRSF PIRSF000171 4 534 2.6E-31 T 13-10-2018 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 48 108 1.3E-5 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 SUPERFAMILY SSF54862 165 246 6.78E-8 T 13-10-2018 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 234 245 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 23 356 4.3E-171 T 13-10-2018 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00633+1.8.99.5|KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 Gene3D G3DSA:3.30.70.20 189 249 9.1E-89 T 13-10-2018 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 SUPERFAMILY SSF56014 120 343 6.28E-32 T 13-10-2018 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 120 335 1.4E-23 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 Gene3D G3DSA:3.30.70.3340 2 122 1.9E-43 T 13-10-2018 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 SUPERFAMILY SSF55124 7 124 9.0E-42 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0545 e400d8df2e1daf0cbe029880c59872cc 356 Gene3D G3DSA:3.30.413.10 123 342 9.1E-89 T 13-10-2018 Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 18 357 1.0E-102 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 SMART SM00729 16 234 9.2E-56 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 SUPERFAMILY SSF102114 12 395 4.97E-103 T 13-10-2018 Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 Gene3D G3DSA:3.80.30.20 4 294 7.0E-93 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 Pfam PF04055 Radical SAM superfamily 21 186 1.8E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2847 45431db650bd71131d5c563e1fa539d7 404 Pfam PF06969 HemN C-terminal domain 321 384 2.3E-6 T 13-10-2018 IPR010723 HemN, C-terminal Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 SUPERFAMILY SSF52402 7 212 6.4E-51 T 13-10-2018 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 Gene3D G3DSA:3.90.1260.10 67 360 1.4E-158 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 Gene3D G3DSA:1.20.5.470 381 406 1.9E-10 T 13-10-2018 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 406 52.22 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 Pfam PF00764 Arginosuccinate synthase 10 400 2.8E-152 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 SUPERFAMILY SSF69864 180 404 6.67E-93 T 13-10-2018 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 Gene3D G3DSA:3.40.50.620 9 179 1.4E-158 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2666 9a0ae84b6673e9592ada7607dae40afa 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 403 5.9E-145 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 438 4.5E-35 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 185 1.1E-11 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 SUPERFAMILY SSF52317 246 454 1.32E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 SUPERFAMILY SSF52540 1 196 1.21E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 451 9.9E-119 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 Gene3D G3DSA:3.40.50.300 3 189 5.5E-23 T 13-10-2018 Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 Gene3D G3DSA:3.40.50.880 255 456 4.9E-10 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_0556 60fef1cfc89f78e405ddfe5df03821e9 459 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 1 443 37.06 T 13-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 17 461 34.792 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 SUPERFAMILY SSF53623 109 300 1.57E-50 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 19 459 2.1E-120 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 393 2.7E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Gene3D G3DSA:3.90.190.20 319 458 1.5E-42 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 SUPERFAMILY SSF53244 318 461 1.78E-46 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Pfam PF08245 Mur ligase middle domain 123 294 1.5E-25 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Gene3D G3DSA:3.40.50.720 14 106 8.4E-22 T 13-10-2018 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 Gene3D G3DSA:3.40.1190.10 107 316 3.3E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2321 e86a08e3d0265a910952a99d273d04b3 463 SUPERFAMILY SSF51984 17 107 9.81E-17 T 13-10-2018 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 SUPERFAMILY SSF48452 227 611 4.22E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 Gene3D G3DSA:1.25.40.10 503 620 8.2E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 SUPERFAMILY SSF48452 217 608 3.6E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 Gene3D G3DSA:1.25.40.10 128 300 5.5E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 SMART SM00028 217 250 0.14 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3432 d047d10c6083d4bd77d266df05ba694a 661 SMART SM00028 508 541 26.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 39.668 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 Pfam PF03462 PCRF domain 13 203 6.2E-67 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 Gene3D G3DSA:3.30.160.20 210 297 7.4E-96 T 13-10-2018 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 SUPERFAMILY SSF75620 12 353 4.84E-131 T 13-10-2018 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 357 3.5E-155 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 Pfam PF00472 RF-1 domain 212 321 1.6E-42 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 SMART SM00937 63 178 1.2E-59 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 Thivi_4173 73f47dc311e539a12a70b43b9fe966cd 359 Gene3D G3DSA:3.30.70.1660 112 341 7.4E-96 T 13-10-2018 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 Gene3D G3DSA:3.20.20.70 13 255 4.1E-78 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 Pfam PF01207 Dihydrouridine synthase (Dus) 19 322 1.8E-84 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 11 332 53.492 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 PIRSF PIRSF006621 5 328 6.9E-75 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 15 326 1.0E-140 T 13-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 Gene3D G3DSA:1.20.120.1460 259 327 7.8E-17 T 13-10-2018 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 98 116 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1832 1e88b31829a612d34a161dfdbd784e84 336 SUPERFAMILY SSF51395 16 325 2.15E-75 T 13-10-2018 Thivi_2599 a8a44db5661e96f0eb9baf6be6a6b264 126 Pfam PF03899 ATP synthase I chain 11 106 8.1E-13 T 13-10-2018 IPR005598 ATP synthase protein I Thivi_1175 fb59d542b25c35aa47224df4cd56a7a0 296 Gene3D G3DSA:3.10.620.30 107 281 4.3E-30 T 13-10-2018 Thivi_1175 fb59d542b25c35aa47224df4cd56a7a0 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 8.0E-11 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Thivi_1175 fb59d542b25c35aa47224df4cd56a7a0 296 SUPERFAMILY SSF54001 84 275 2.66E-24 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_1175 fb59d542b25c35aa47224df4cd56a7a0 296 SMART SM00460 175 250 5.9E-15 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_1175 fb59d542b25c35aa47224df4cd56a7a0 296 Pfam PF01841 Transglutaminase-like superfamily 146 248 8.6E-18 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Pfam PF13596 PAS domain 785 890 3.6E-24 T 13-10-2018 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF47757 259 324 2.88E-14 T 13-10-2018 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Pfam PF08448 PAS fold 912 1021 1.3E-8 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Gene3D G3DSA:3.30.450.20 770 898 1.2E-10 T 13-10-2018 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Gene3D G3DSA:3.30.450.20 899 1026 2.6E-10 T 13-10-2018 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Pfam PF01339 CheB methylesterase 57 234 9.6E-52 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF52738 52 240 2.48E-55 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SMART SM00091 783 852 20.0 T 13-10-2018 IPR000014 PAS domain Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SMART SM00091 905 972 5.1E-4 T 13-10-2018 IPR000014 PAS domain Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Pfam PF01739 CheR methyltransferase, SAM binding domain 325 513 5.5E-51 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SMART SM00138 257 520 2.8E-81 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF57997 700 778 5.56E-5 T 13-10-2018 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Pfam PF03705 CheR methyltransferase, all-alpha domain 259 310 5.2E-16 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF55785 889 979 1.01E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF53335 323 519 2.99E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 PRINTS PR00996 Glutamate methyltransferase family signature 356 376 1.9E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 PRINTS PR00996 Glutamate methyltransferase family signature 392 408 1.9E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 PRINTS PR00996 Glutamate methyltransferase family signature 460 474 1.9E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 PRINTS PR00996 Glutamate methyltransferase family signature 479 502 1.9E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 PRINTS PR00996 Glutamate methyltransferase family signature 279 292 1.9E-27 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Gene3D G3DSA:3.40.50.180 52 237 8.0E-64 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 SUPERFAMILY SSF55785 796 902 2.47E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2576 437e77c4e71d82a3068109440a77eb29 1045 Gene3D G3DSA:3.40.50.150 322 522 5.0E-61 T 13-10-2018 Thivi_0953 69c4b436df6391bc324fc88b7ab8679e 87 SUPERFAMILY SSF64307 6 69 9.42E-9 T 13-10-2018 IPR036868 TusA-like domain superfamily Thivi_0953 69c4b436df6391bc324fc88b7ab8679e 87 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 7 70 9.7E-17 T 13-10-2018 IPR018720 Domain of unknown function DUF2249 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SMART SM00436 106 194 1.9E-52 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SUPERFAMILY SSF57783 588 625 1.26E-11 T 13-10-2018 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 706 55.312 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SUPERFAMILY SSF57783 631 677 3.06E-12 T 13-10-2018 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01751 Toprim domain 3 115 1.6E-26 T 13-10-2018 IPR006171 TOPRIM domain Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 1.1E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 1.1E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 1.1E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 1.1E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 1.1E-36 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:1.10.290.10 258 393 9.7E-172 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SMART SM00437 250 522 1.9E-117 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 623 1.5E-243 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 638 675 1.3E-14 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 681 719 1.0E-12 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 624 2.4E-15 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 722 740 1.2 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:3.40.50.140 1 136 3.8E-49 T 13-10-2018 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 287 309 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SMART SM00493 1 101 1.4E-31 T 13-10-2018 IPR006171 TOPRIM domain Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:1.10.460.10 137 562 9.7E-172 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:3.30.65.10 629 678 4.6E-8 T 13-10-2018 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:3.30.65.10 575 628 1.1E-6 T 13-10-2018 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Pfam PF01131 DNA topoisomerase 131 559 2.8E-128 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 SUPERFAMILY SSF56712 1 601 3.01E-190 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Thivi_3202 58f4d4f63b62468cb157fd95003b3778 767 Gene3D G3DSA:2.70.20.10 186 469 9.7E-172 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Thivi_4472 e07e9690a78046a26757a0289315d2ad 206 SUPERFAMILY SSF81342 23 205 2.35E-35 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_4472 e07e9690a78046a26757a0289315d2ad 206 Pfam PF01292 Prokaryotic cytochrome b561 27 202 2.7E-22 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_4472 e07e9690a78046a26757a0289315d2ad 206 Gene3D G3DSA:1.20.950.20 17 190 5.5E-19 T 13-10-2018 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 4.1E-94 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 Gene3D G3DSA:1.10.1740.10 1 121 2.2E-40 T 13-10-2018 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 SUPERFAMILY SSF88946 2 106 1.88E-30 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 Pfam PF04542 Sigma-70 region 2 25 92 9.3E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 Pfam PF08281 Sigma-70, region 4 132 180 9.1E-19 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 4.5E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 Gene3D G3DSA:1.10.10.10 122 191 1.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0601 00907b16126f7f765fcd15d78338a058 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0601 00907b16126f7f765fcd15d78338a058 192 SUPERFAMILY SSF88659 123 186 1.53E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_2721 69b3ca1eb5aac8dbaebfc0747754bb6c 150 Gene3D G3DSA:3.40.250.10 27 149 6.5E-23 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2721 69b3ca1eb5aac8dbaebfc0747754bb6c 150 Pfam PF00581 Rhodanese-like domain 37 129 1.1E-7 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2721 69b3ca1eb5aac8dbaebfc0747754bb6c 150 SMART SM00450 32 137 4.3E-5 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2721 69b3ca1eb5aac8dbaebfc0747754bb6c 150 SUPERFAMILY SSF52821 13 147 2.23E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Gene3D G3DSA:1.10.150.80 535 613 1.9E-21 T 13-10-2018 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SUPERFAMILY SSF47819 533 615 2.62E-20 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF09382 RQC domain 405 520 2.5E-36 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Gene3D G3DSA:1.10.10.10 339 526 6.0E-51 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF16124 RecQ zinc-binding 341 403 2.2E-21 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SUPERFAMILY SSF52540 4 193 1.15E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Gene3D G3DSA:3.40.50.300 1 205 3.5E-79 T 13-10-2018 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SMART SM00341 536 616 9.0E-15 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SMART SM00487 19 215 7.5E-30 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SMART SM00956 410 518 1.9E-48 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SMART SM00490 248 329 3.1E-24 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF00270 DEAD/DEAH box helicase 26 182 1.5E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF00570 HRDC domain 540 606 2.5E-20 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 608 8.2E-243 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF00271 Helicase conserved C-terminal domain 222 328 5.4E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 SUPERFAMILY SSF52540 205 458 6.37E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Gene3D G3DSA:3.40.50.300 206 338 6.0E-40 T 13-10-2018 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 13 462 1.5E-155 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Thivi_2116 ca250bd1bc96917791450a75db8febf4 743 Pfam PF14493 Helix-turn-helix domain 643 734 4.6E-19 T 13-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Gene3D G3DSA:3.20.20.80 225 624 2.3E-162 T 13-10-2018 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Pfam PF00128 Alpha amylase, catalytic domain 278 347 1.2E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 126 208 1.5E-23 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 SUPERFAMILY SSF51011 626 728 1.51E-33 T 13-10-2018 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 630 727 2.3E-19 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 SUPERFAMILY SSF81296 139 207 8.26E-11 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_2901 876b2a680c3d8074676132b4d5420034 758 SUPERFAMILY SSF81296 22 116 4.55E-12 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_2901 876b2a680c3d8074676132b4d5420034 758 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 110 725 5.4E-280 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Gene3D G3DSA:2.60.40.1180 625 730 1.5E-37 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Thivi_2901 876b2a680c3d8074676132b4d5420034 758 PIRSF PIRSF000463 13 738 3.1E-287 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Gene3D G3DSA:2.60.40.10 10 222 2.4E-69 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2901 876b2a680c3d8074676132b4d5420034 758 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 102 729 44.759 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 SMART SM00642 252 612 1.9E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_2901 876b2a680c3d8074676132b4d5420034 758 SUPERFAMILY SSF51445 181 618 1.44E-114 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 Pfam PF01327 Polypeptide deformylase 4 155 5.7E-42 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 PRINTS PR01576 Peptide deformylase signature 94 105 5.6E-24 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 PRINTS PR01576 Peptide deformylase signature 34 63 5.6E-24 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 PRINTS PR01576 Peptide deformylase signature 106 124 5.6E-24 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 PRINTS PR01576 Peptide deformylase signature 125 154 5.6E-24 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 Hamap MF_00163 Peptide deformylase [def]. 2 167 26.123 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 PIRSF PIRSF004749 1 167 4.3E-48 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 SUPERFAMILY SSF56420 2 166 5.1E-51 T 13-10-2018 IPR036821 Peptide deformylase superfamily Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 Gene3D G3DSA:3.90.45.10 1 167 2.7E-50 T 13-10-2018 IPR036821 Peptide deformylase superfamily Thivi_3366 07060eb36cf40e8fa832f23c0418ef23 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 155 3.7E-37 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3515 c9cad944732d0bd4e994ecb1bf9744df 160 SUPERFAMILY SSF53955 9 152 1.64E-54 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3515 c9cad944732d0bd4e994ecb1bf9744df 160 Gene3D G3DSA:1.10.530.40 11 153 2.3E-55 T 13-10-2018 Thivi_3515 c9cad944732d0bd4e994ecb1bf9744df 160 Pfam PF00959 Phage lysozyme 37 142 1.1E-22 T 13-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Thivi_4355 c8a381da39a145f2cfaf93d3f47c819a 119 Pfam PF04358 DsrC like protein 15 109 1.2E-20 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_4355 c8a381da39a145f2cfaf93d3f47c819a 119 SUPERFAMILY SSF69721 15 109 1.12E-20 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_4355 c8a381da39a145f2cfaf93d3f47c819a 119 Gene3D G3DSA:1.10.10.370 43 110 1.4E-18 T 13-10-2018 Thivi_4355 c8a381da39a145f2cfaf93d3f47c819a 119 PIRSF PIRSF006223 4 111 6.1E-25 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_4355 c8a381da39a145f2cfaf93d3f47c819a 119 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 16 109 2.7E-18 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 SUPERFAMILY SSF55021 78 161 4.25E-25 T 13-10-2018 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 SUPERFAMILY SSF55021 1 74 7.55E-22 T 13-10-2018 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 9.0E-33 T 13-10-2018 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 Pfam PF10369 Small subunit of acetolactate synthase 84 157 3.8E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 Gene3D G3DSA:3.30.70.260 1 78 9.0E-34 T 13-10-2018 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 7.2E-63 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 Gene3D G3DSA:3.30.70.1150 83 163 2.6E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Thivi_1003 de5335b806086d9b23a35c0e49f5d45b 164 Pfam PF13710 ACT domain 13 71 7.3E-15 T 13-10-2018 Thivi_1676 bd2c89f53be3961eecd16eee6a5cc205 393 Pfam PF01955 Adenosylcobinamide amidohydrolase 22 254 2.0E-57 T 13-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 Gene3D G3DSA:1.20.5.250 1 47 1.0E-25 T 13-10-2018 Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 Pfam PF00556 Antenna complex alpha/beta subunit 12 47 6.3E-12 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 PRINTS PR00674 Light harvesting protein B chain signature 9 29 7.8E-13 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 PRINTS PR00674 Light harvesting protein B chain signature 29 46 7.8E-13 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 PIRSF PIRSF002900 1 47 4.6E-24 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1995 f07ce822117f139bde9c8c1647d3fb4e 47 SUPERFAMILY SSF56918 3 47 2.15E-18 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1379 00c61c462921cf3ccf90f59551156417 802 Gene3D G3DSA:1.25.40.10 504 728 2.6E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SUPERFAMILY SSF48452 23 567 9.36E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 103 1.5E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 Gene3D G3DSA:1.10.10.10 2 108 9.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1379 00c61c462921cf3ccf90f59551156417 802 Gene3D G3DSA:1.25.40.10 314 503 1.3E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SMART SM00028 403 436 73.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SMART SM00028 323 359 35.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SMART SM00028 437 470 28.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SMART SM00862 28 103 5.5E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_1379 00c61c462921cf3ccf90f59551156417 802 SUPERFAMILY SSF46894 11 104 2.64E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Gene3D G3DSA:2.30.30.40 571 698 6.3E-35 T 13-10-2018 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 7.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 568 7.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 7.1E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SMART SM01231 323 383 1.5E-15 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SMART SM00260 563 702 6.5E-36 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Pfam PF01627 Hpt domain 8 98 2.5E-16 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Gene3D G3DSA:1.20.120.160 4 141 1.2E-36 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 570 8.4E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Gene3D G3DSA:3.30.565.10 384 570 1.9E-52 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Gene3D G3DSA:1.10.287.560 324 383 5.4E-18 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SMART SM00073 6 103 2.8E-24 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SMART SM00387 428 571 2.7E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Gene3D G3DSA:2.40.50.180 594 657 6.3E-35 T 13-10-2018 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Pfam PF01584 CheW-like domain 576 703 8.9E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SUPERFAMILY SSF47384 325 384 3.26E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SUPERFAMILY SSF50341 570 702 4.84E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SUPERFAMILY SSF47226 7 125 1.57E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 324 383 1.7E-11 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0380 c2b914865e4c5fd0583baf8189eb96f4 726 SUPERFAMILY SSF55874 386 569 4.19E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 456 529 1.4E-11 T 13-10-2018 IPR000160 GGDEF domain Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 SMART SM00052 26 268 3.9E-35 T 13-10-2018 IPR001633 EAL domain Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 Pfam PF00563 EAL domain 37 263 6.2E-50 T 13-10-2018 IPR001633 EAL domain Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 Gene3D G3DSA:3.30.70.270 425 607 4.5E-16 T 13-10-2018 Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 452 525 6.5E-10 T 13-10-2018 IPR000160 GGDEF domain Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 Gene3D G3DSA:3.10.580.10 300 424 6.7E-6 T 13-10-2018 Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 SMART SM00267 416 608 3.8E-4 T 13-10-2018 IPR000160 GGDEF domain Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 SUPERFAMILY SSF141868 32 264 5.23E-58 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 SUPERFAMILY SSF54631 303 420 1.95E-8 T 13-10-2018 Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 SUPERFAMILY SSF55073 434 604 8.63E-16 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0529 6d8606573567a6d7aa2b441adaca9a1d 640 Gene3D G3DSA:3.20.20.450 19 274 2.1E-60 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1456 dd37491ddd1b41d34d55304a810846ea 350 SUPERFAMILY SSF56300 159 327 2.61E-12 T 13-10-2018 Thivi_1456 dd37491ddd1b41d34d55304a810846ea 350 Pfam PF00149 Calcineurin-like phosphoesterase 166 270 1.6E-5 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_1456 dd37491ddd1b41d34d55304a810846ea 350 Gene3D G3DSA:3.60.21.10 159 279 4.6E-7 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_2211 45bcf24d873dd0b1cc45a2a4d4c28343 103 SUPERFAMILY SSF54928 3 88 2.33E-7 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF00563 EAL domain 791 1026 1.9E-64 T 13-10-2018 IPR001633 EAL domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:3.20.20.450 790 1038 2.0E-84 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:1.20.120.30 1051 1166 1.7E-5 T 13-10-2018 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SUPERFAMILY SSF55785 496 599 8.2E-29 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 609 773 1.1E-39 T 13-10-2018 IPR000160 GGDEF domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF08447 PAS fold 385 473 8.7E-22 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00267 602 775 1.5E-62 T 13-10-2018 IPR000160 GGDEF domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF00990 Diguanylate cyclase, GGDEF domain 613 771 2.3E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM01079 72 268 1.3E-75 T 13-10-2018 IPR006189 CHASE domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:3.30.450.350 76 287 3.5E-40 T 13-10-2018 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SUPERFAMILY SSF55785 349 478 1.52E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:3.30.450.20 355 476 8.8E-30 T 13-10-2018 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SUPERFAMILY SSF55073 618 776 2.67E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF03924 CHASE domain 76 266 2.0E-60 T 13-10-2018 IPR006189 CHASE domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 358 487 6.2E-12 T 13-10-2018 IPR000014 PAS domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 492 609 2.2E-17 T 13-10-2018 IPR000014 PAS domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:3.30.70.270 611 789 2.0E-56 T 13-10-2018 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Gene3D G3DSA:3.30.450.20 485 610 4.9E-33 T 13-10-2018 Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF13426 PAS domain 499 601 3.8E-15 T 13-10-2018 IPR000014 PAS domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00086 437 480 8.8E-5 T 13-10-2018 IPR001610 PAC motif Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00086 560 602 2.4E-4 T 13-10-2018 IPR001610 PAC motif Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00091 362 430 0.012 T 13-10-2018 IPR000014 PAS domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00091 488 554 7.3E-7 T 13-10-2018 IPR000014 PAS domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SMART SM00052 785 1031 3.8E-87 T 13-10-2018 IPR001633 EAL domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 Pfam PF13682 Chemoreceptor zinc-binding domain 1065 1128 3.2E-12 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Thivi_0695 538fd74cfaacb8454000899ec1c94300 1170 SUPERFAMILY SSF141868 791 1043 7.45E-80 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SUPERFAMILY SSF68912 1 46 1.61E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 6.2E-18 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 247.742 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SUPERFAMILY SSF52540 91 371 8.78E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SUPERFAMILY SSF50249 49 125 3.88E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Gene3D G3DSA:2.40.50.140 48 117 1.4E-33 T 13-10-2018 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 5.8E-213 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Gene3D G3DSA:1.10.720.10 1 47 6.5E-21 T 13-10-2018 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SMART SM00382 170 355 6.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SMART SM00959 5 47 1.6E-19 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Gene3D G3DSA:3.40.50.300 130 417 5.1E-129 T 13-10-2018 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 SMART SM00357 52 118 6.9E-17 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.5E-31 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Thivi_2504 2980513d4a0074ba687093caeb0cd4e8 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.1E-22 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 200 336 3.4E-18 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 Gene3D G3DSA:2.10.70.40 228 280 7.6E-42 T 13-10-2018 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 Gene3D G3DSA:1.10.530.10 194 332 7.6E-42 T 13-10-2018 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 Pfam PF10135 Rod binding protein 67 114 4.3E-12 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 29 336 1.4E-88 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 SMART SM00047 183 342 3.5E-37 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 PRINTS PR01002 Flagellar protein FlgJ signature 70 90 1.8E-8 T 13-10-2018 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 PRINTS PR01002 Flagellar protein FlgJ signature 91 113 1.8E-8 T 13-10-2018 Thivi_0403 cd448a2677d8735a6680f888c93e6854 358 PRINTS PR01002 Flagellar protein FlgJ signature 45 68 1.8E-8 T 13-10-2018 Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 Pfam PF12849 PBP superfamily domain 29 319 2.8E-62 T 13-10-2018 IPR024370 PBP domain Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 PIRSF PIRSF002756 2 352 5.1E-109 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 Gene3D G3DSA:3.40.190.10 31 340 6.6E-106 T 13-10-2018 Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 SUPERFAMILY SSF53850 31 349 2.92E-90 T 13-10-2018 Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 31 349 1.4E-105 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0971 fffeaeed7e8853adda66fc511ccc1f98 352 Gene3D G3DSA:3.40.190.10 108 294 6.6E-106 T 13-10-2018 Thivi_3959 7be884ecf5c17234000a50e514b1bf21 258 Gene3D G3DSA:2.50.20.10 50 173 2.1E-7 T 13-10-2018 Thivi_3942 e77485aba58ea20f12a87a6ca7410ec0 228 Gene3D G3DSA:3.40.140.10 31 201 1.1E-41 T 13-10-2018 Thivi_3942 e77485aba58ea20f12a87a6ca7410ec0 228 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 48 151 7.9E-14 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Thivi_3942 e77485aba58ea20f12a87a6ca7410ec0 228 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 98 140 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Thivi_3942 e77485aba58ea20f12a87a6ca7410ec0 228 SUPERFAMILY SSF53927 38 202 3.83E-39 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Thivi_0694 6350b65042a58f87be162b19e777bc10 307 SUPERFAMILY SSF55073 144 301 7.3E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0694 6350b65042a58f87be162b19e777bc10 307 Gene3D G3DSA:3.30.70.270 139 305 3.0E-56 T 13-10-2018 Thivi_0694 6350b65042a58f87be162b19e777bc10 307 SMART SM00448 1 115 2.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0694 6350b65042a58f87be162b19e777bc10 307 SUPERFAMILY SSF52172 2 133 3.56E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0694 6350b65042a58f87be162b19e777bc10 307 Gene3D G3DSA:3.40.50.2300 2 138 4.4E-32 T 13-10-2018 Thivi_0694 6350b65042a58f87be162b19e777bc10 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 300 1.0E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0694 6350b65042a58f87be162b19e777bc10 307 SMART SM00267 128 300 3.1E-57 T 13-10-2018 IPR000160 GGDEF domain Thivi_0694 6350b65042a58f87be162b19e777bc10 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 296 6.5E-44 T 13-10-2018 IPR000160 GGDEF domain Thivi_0694 6350b65042a58f87be162b19e777bc10 307 Pfam PF00072 Response regulator receiver domain 3 115 6.0E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0429 81a3b835c6ec7ee4fa8980d2487d5379 97 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 97 1.0E-14 T 13-10-2018 IPR007711 Toxin HigB-1 Thivi_0429 81a3b835c6ec7ee4fa8980d2487d5379 97 Gene3D G3DSA:3.30.2310.20 1 97 7.3E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_0429 81a3b835c6ec7ee4fa8980d2487d5379 97 SUPERFAMILY SSF143011 1 97 3.34E-14 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Gene3D G3DSA:3.30.450.20 129 257 1.6E-38 T 13-10-2018 Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 419 1.1E-46 T 13-10-2018 IPR000160 GGDEF domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 255 1.0E-21 T 13-10-2018 IPR000014 PAS domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Gene3D G3DSA:3.40.50.2300 1 128 2.6E-21 T 13-10-2018 Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SUPERFAMILY SSF52172 2 138 2.85E-25 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SMART SM00267 249 421 2.3E-68 T 13-10-2018 IPR000160 GGDEF domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 PIRSF PIRSF005925 248 684 4.6E-148 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 PIRSF PIRSF005925 125 256 3.4E-11 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Pfam PF00072 Response regulator receiver domain 5 114 1.5E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Gene3D G3DSA:3.30.70.270 258 433 2.2E-64 T 13-10-2018 Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 417 3.2E-54 T 13-10-2018 IPR000160 GGDEF domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SMART SM00086 207 249 7.5E-7 T 13-10-2018 IPR001610 PAC motif Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Pfam PF13426 PAS domain 147 247 2.8E-14 T 13-10-2018 IPR000014 PAS domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SMART SM00052 431 677 1.2E-119 T 13-10-2018 IPR001633 EAL domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Pfam PF00563 EAL domain 437 672 1.9E-72 T 13-10-2018 IPR001633 EAL domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SMART SM00448 3 114 4.7E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SMART SM00091 135 201 0.0014 T 13-10-2018 IPR000014 PAS domain Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SUPERFAMILY SSF141868 436 678 4.71E-87 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SUPERFAMILY SSF55785 140 247 7.68E-30 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 SUPERFAMILY SSF55073 265 422 2.49E-53 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2111 bf0c4dd83f48bbec32ca393734fcff55 687 Gene3D G3DSA:3.20.20.450 434 682 2.0E-100 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4340 6de3e0c5b627af8667ad44c98163adca 106 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 18 105 1.5E-27 T 13-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Thivi_4340 6de3e0c5b627af8667ad44c98163adca 106 PIRSF PIRSF006156 18 106 2.7E-15 T 13-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Thivi_4340 6de3e0c5b627af8667ad44c98163adca 106 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 19 104 9.0E-22 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thivi_4340 6de3e0c5b627af8667ad44c98163adca 106 SUPERFAMILY SSF143011 19 104 1.05E-22 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_4340 6de3e0c5b627af8667ad44c98163adca 106 Gene3D G3DSA:3.30.2310.20 17 106 8.9E-28 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.1E-88 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 2 112 5.31E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PIRSF PIRSF002111 1 386 1.1E-174 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 PIRSF PIRSF002111 385 543 1.6E-38 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 255 356 1.34E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 6 98 2.2E-15 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 99 181 2.2E-7 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 105 184 2.14E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-216 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 187 268 3.5E-26 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 269 357 1.8E-27 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 358 444 1.8E-24 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 429 530 3.64E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Gene3D G3DSA:2.40.50.140 445 528 2.9E-20 T 13-10-2018 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 189 275 2.91E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 449 520 1.1E-19 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 275 347 8.2E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 362 434 2.4E-21 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 19 87 2.2E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 103 171 2.9E-8 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SMART SM00316 190 260 6.5E-28 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 SUPERFAMILY SSF50249 347 438 4.15E-22 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 19 77 1.2E-4 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 448 520 4.9E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 361 434 6.2E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 279 347 4.5E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 190 260 6.9E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0301 fc4964401a5060c25274336a14d6a43c 559 Pfam PF00575 S1 RNA binding domain 103 171 2.9E-11 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF47226 436 535 7.06E-6 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF00072 Response regulator receiver domain 1752 1863 4.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00073 786 882 0.011 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00073 1064 1161 6.7E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00073 625 722 9.5E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF52172 1749 1868 6.26E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00448 1750 1863 6.5E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:3.40.50.12740 1751 1872 6.3E-40 T 13-10-2018 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:1.20.120.160 618 748 1.9E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:1.20.120.160 1058 1183 2.7E-22 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF47226 1064 1182 2.88E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:1.20.120.160 787 910 5.3E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF01584 CheW-like domain 1598 1730 2.8E-14 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:2.40.50.180 1616 1683 5.3E-32 T 13-10-2018 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:2.30.30.40 1593 1723 5.3E-32 T 13-10-2018 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF55874 1410 1591 2.23E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1456 1592 1.9E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00260 1585 1728 8.3E-20 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF47226 626 745 1.96E-23 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM00387 1452 1593 2.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF47226 787 895 1.06E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Gene3D G3DSA:3.30.565.10 1406 1592 2.8E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF01627 Hpt domain 627 715 7.3E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF01627 Hpt domain 789 879 2.1E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 Pfam PF01627 Hpt domain 1066 1166 1.3E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SUPERFAMILY SSF50341 1592 1728 9.68E-23 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 SMART SM01231 1267 1407 3.6E-8 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1497 1511 7.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1577 1590 7.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3303 3f545ad46d2c97780d5a0264d1f5a77b 1872 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1553 1571 7.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2608 ab2ee15b8850a077641800533f43c657 192 SUPERFAMILY SSF55729 1 147 2.28E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_2608 ab2ee15b8850a077641800533f43c657 192 Gene3D G3DSA:3.40.630.30 1 188 2.4E-35 T 13-10-2018 Thivi_0059 e8f222d03ce3158b107d4255496ab136 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 65 19.426 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Thivi_0059 e8f222d03ce3158b107d4255496ab136 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 46 4.3E-18 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Thivi_0059 e8f222d03ce3158b107d4255496ab136 74 Pfam PF02416 mttA/Hcf106 family 6 46 7.4E-15 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Thivi_0059 e8f222d03ce3158b107d4255496ab136 74 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 23 42 1.9E-6 T 13-10-2018 Thivi_0059 e8f222d03ce3158b107d4255496ab136 74 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 3 23 1.9E-6 T 13-10-2018 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 202 4.8E-72 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 SUPERFAMILY SSF55821 5 206 1.69E-85 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 PIRSF PIRSF001259 4 373 1.5E-125 T 13-10-2018 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 201 4.9E-83 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 206 38.534 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 SUPERFAMILY SSF142695 209 371 2.35E-45 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 Pfam PF00925 GTP cyclohydrolase II 214 370 8.8E-42 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 Gene3D G3DSA:3.40.50.10990 209 372 1.5E-30 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Thivi_1034 06557e1d6f2feb272551f86263b694bb 376 Gene3D G3DSA:3.90.870.10 1 208 3.1E-87 T 13-10-2018 Thivi_3055 e74d9f9ac013a9604ba3b0a02a721b85 420 Pfam PF00535 Glycosyl transferase family 2 59 227 8.0E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_3055 e74d9f9ac013a9604ba3b0a02a721b85 420 SUPERFAMILY SSF53448 52 320 4.92E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3055 e74d9f9ac013a9604ba3b0a02a721b85 420 Gene3D G3DSA:3.90.550.10 49 274 1.0E-36 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 SUPERFAMILY SSF55785 126 198 2.97E-15 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 SMART SM00091 21 87 0.0034 T 13-10-2018 IPR000014 PAS domain Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 SMART SM00091 142 200 11.0 T 13-10-2018 IPR000014 PAS domain Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 Pfam PF13188 PAS domain 22 75 1.0E-6 T 13-10-2018 IPR000014 PAS domain Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 199 8.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 SUPERFAMILY SSF55785 14 79 5.86E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 Pfam PF13426 PAS domain 159 197 0.0035 T 13-10-2018 IPR000014 PAS domain Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 Gene3D G3DSA:3.30.450.20 18 127 2.4E-8 T 13-10-2018 Thivi_1362 8ac51e69bb4d048b45068d214583ba40 202 Gene3D G3DSA:3.30.450.20 128 202 2.2E-14 T 13-10-2018 Thivi_0872 b2fb2f790d817deeb9b1d997ced8f61c 199 Gene3D G3DSA:3.30.70.560 35 199 1.7E-46 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_0872 b2fb2f790d817deeb9b1d997ced8f61c 199 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 39 166 1.6E-30 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_0872 b2fb2f790d817deeb9b1d997ced8f61c 199 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 38 166 1.8E-38 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_0872 b2fb2f790d817deeb9b1d997ced8f61c 199 SUPERFAMILY SSF55083 37 189 1.16E-48 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_0872 b2fb2f790d817deeb9b1d997ced8f61c 199 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 121 132 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82866 291 490 9.81E-46 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 616 630 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.1E-79 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.70.1430 560 656 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Pfam PF00873 AcrB/AcrD/AcrF family 4 1015 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.70.1440 657 855 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82693 40 134 5.41E-26 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.2090.10 709 798 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82866 799 1018 8.11E-50 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:3.30.70.1430 40 806 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82693 137 324 6.8E-22 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82714 183 266 6.8E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:1.20.1640.10 506 1012 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 Gene3D G3DSA:1.20.1640.10 10 505 0.0 T 13-10-2018 Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82714 710 796 2.22E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2766 ed74104c51d49b2e646bf1503f4e4654 1038 SUPERFAMILY SSF82693 558 658 1.41E-14 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Gene3D G3DSA:3.30.450.20 370 504 4.9E-38 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 504 668 7.3E-46 T 13-10-2018 IPR000160 GGDEF domain Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Gene3D G3DSA:3.40.190.10 125 222 1.0E-66 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Pfam PF09084 NMT1/THI5 like 56 260 1.4E-45 T 13-10-2018 IPR015168 SsuA/THI5-like Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Gene3D G3DSA:3.30.70.270 505 671 8.4E-60 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SUPERFAMILY SSF53850 46 325 5.6E-27 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SMART SM00091 382 448 3.9E-4 T 13-10-2018 IPR000014 PAS domain Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Pfam PF00990 Diguanylate cyclase, GGDEF domain 507 664 1.8E-49 T 13-10-2018 IPR000160 GGDEF domain Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Gene3D G3DSA:3.40.190.10 47 309 1.0E-66 T 13-10-2018 Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SMART SM00267 496 668 5.3E-70 T 13-10-2018 IPR000160 GGDEF domain Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SUPERFAMILY SSF55785 389 496 1.4E-29 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SMART SM00086 454 496 9.0E-11 T 13-10-2018 IPR001610 PAC motif Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 SUPERFAMILY SSF55073 512 667 7.69E-52 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 Pfam PF13426 PAS domain 392 495 6.6E-15 T 13-10-2018 IPR000014 PAS domain Thivi_3822 c00b2e87f44bd430509f1e3b51abd088 694 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 381 503 2.2E-22 T 13-10-2018 IPR000014 PAS domain Thivi_0267 26ebab23c0a3333a33621214223783c0 183 PIRSF PIRSF011484 1 180 2.3E-67 T 13-10-2018 IPR009822 YaeQ Thivi_0267 26ebab23c0a3333a33621214223783c0 183 Gene3D G3DSA:3.10.640.10 1 182 5.8E-76 T 13-10-2018 IPR038590 YaeQ superfamily Thivi_0267 26ebab23c0a3333a33621214223783c0 183 SMART SM01322 1 176 1.2E-109 T 13-10-2018 IPR009822 YaeQ Thivi_0267 26ebab23c0a3333a33621214223783c0 183 SUPERFAMILY SSF52980 2 178 3.22E-68 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0267 26ebab23c0a3333a33621214223783c0 183 Pfam PF07152 YaeQ protein 1 173 1.5E-74 T 13-10-2018 IPR009822 YaeQ Thivi_1777 422d991c1a73ddc4cfdabb8657ea3138 123 SUPERFAMILY SSF159468 14 95 3.79E-11 T 13-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1777 422d991c1a73ddc4cfdabb8657ea3138 123 Pfam PF01990 ATP synthase (F/14-kDa) subunit 15 91 4.3E-5 T 13-10-2018 IPR008218 ATPase, V1 complex, subunit F GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1777 422d991c1a73ddc4cfdabb8657ea3138 123 Gene3D G3DSA:3.40.50.10580 12 77 8.8E-8 T 13-10-2018 IPR036906 ATPase, V1 complex, subunit F superfamily GO:0034220 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 PIRSF PIRSF005572 7 387 1.5E-127 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 Gene3D G3DSA:3.40.640.10 21 262 4.2E-140 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 SUPERFAMILY SSF53383 10 380 1.6E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 Pfam PF00266 Aminotransferase class-V 10 372 6.8E-91 T 13-10-2018 IPR000192 Aminotransferase class V domain Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 10 389 4.9E-193 T 13-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Thivi_0485 23cf053569464d0c5c0e0f9dfa39f05f 408 Gene3D G3DSA:3.90.1150.10 10 379 4.2E-140 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 PRINTS PR00070 Dihydrofolate reductase signature 31 41 5.7E-16 T 13-10-2018 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 PRINTS PR00070 Dihydrofolate reductase signature 45 53 5.7E-16 T 13-10-2018 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 PRINTS PR00070 Dihydrofolate reductase signature 58 69 5.7E-16 T 13-10-2018 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 PRINTS PR00070 Dihydrofolate reductase signature 109 123 5.7E-16 T 13-10-2018 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 Pfam PF00186 Dihydrofolate reductase 20 177 8.5E-57 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 Gene3D G3DSA:3.40.430.10 19 179 2.4E-55 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 SUPERFAMILY SSF53597 19 178 2.1E-53 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 31 53 - T 13-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Thivi_0961 c1e8d9a0e134fe016f3f8e8a39d85500 179 PIRSF PIRSF000194 15 179 1.5E-60 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 SMART SM00382 371 558 5.0E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 Gene3D G3DSA:3.40.50.300 332 584 3.3E-87 T 13-10-2018 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 Gene3D G3DSA:1.20.1560.10 3 331 2.2E-85 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 585 2.5E-238 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 SUPERFAMILY SSF90123 17 330 4.32E-77 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 Pfam PF00664 ABC transporter transmembrane region 32 298 5.3E-53 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 SUPERFAMILY SSF52540 335 583 1.4E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 Pfam PF00005 ABC transporter 364 512 2.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3807 4885bbf084794cbe103a07ed80edb0de 587 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 SUPERFAMILY SSF53098 5 454 4.78E-117 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 Pfam PF01609 Transposase DDE domain 172 357 2.2E-8 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 Pfam PF02281 Transposase Tn5 dimerisation domain 357 445 1.0E-19 T 13-10-2018 IPR003201 Transposase Tn5, dimerisation Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 Gene3D G3DSA:3.90.350.10 60 344 1.3E-77 T 13-10-2018 IPR014736 Transposase, Tn5-like, core Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 Pfam PF14706 Transposase DNA-binding 5 59 1.1E-20 T 13-10-2018 IPR014735 Transposase, Tn5-like, N-terminal Thivi_3892 e35ecb0a05692787a9077e322b1da680 457 Gene3D G3DSA:1.10.740.10 347 453 2.6E-12 T 13-10-2018 IPR014737 Transposase, Tn5-like, C-terminal Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:2.10.70.100 946 991 9.5E-8 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.40 24 188 4.2E-19 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 554 680 2.2E-17 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 307 431 1.6E-27 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 189 306 1.5E-14 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55781 45 191 3.49E-15 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 430 554 9.91E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF08448 PAS fold 1008 1112 1.1E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF08448 PAS fold 205 309 5.5E-10 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF13185 GAF domain 44 186 3.8E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00065 45 195 0.0046 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00065 712 869 0.14 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55874 1221 1317 9.35E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF08447 PAS fold 897 984 2.1E-8 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00086 1068 1110 84.0 T 13-10-2018 IPR001610 PAC motif Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00086 643 683 0.0017 T 13-10-2018 IPR001610 PAC motif Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00086 948 990 0.0012 T 13-10-2018 IPR001610 PAC motif Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00086 393 433 1.9 T 13-10-2018 IPR001610 PAC motif Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00086 516 556 0.052 T 13-10-2018 IPR001610 PAC motif Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 305 431 1.12E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 861 988 3.66E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55781 715 872 2.84E-11 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 997 1123 6.8E-14 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.565.10 1205 1321 4.4E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 439 9.6E-22 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 443 563 1.7E-19 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 564 690 6.4E-14 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 870 996 1.2E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 1001 1116 2.3E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 201 315 2.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 553 681 3.49E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00091 445 511 2.6E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00091 568 634 2.5 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00091 320 387 7.4E-9 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00091 873 940 1.1 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SMART SM00091 199 263 0.0047 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.40 681 871 7.1E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 186 306 2.97E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF13426 PAS domain 585 681 2.7E-4 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF13426 PAS domain 456 554 3.0E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 SUPERFAMILY SSF55785 988 1108 1.74E-10 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF00989 PAS fold 322 430 1.9E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 435 553 1.7E-22 T 13-10-2018 Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Pfam PF07568 Histidine kinase 1131 1198 3.4E-6 T 13-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Thivi_2441 10f16a5e772a492169ddfe448d262a2a 1342 Gene3D G3DSA:3.30.450.20 872 936 4.0E-16 T 13-10-2018 Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 Gene3D G3DSA:3.10.450.70 23 83 5.3E-16 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 Gene3D G3DSA:3.40.30.10 84 240 4.1E-46 T 13-10-2018 Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 Pfam PF13098 Thioredoxin-like domain 114 238 7.4E-22 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 SUPERFAMILY SSF52833 95 239 2.73E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 SUPERFAMILY SSF54423 26 83 7.85E-13 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Thivi_3725 8a38bb728684b26b6f2aef9ff761d1dd 244 Pfam PF10411 Disulfide bond isomerase protein N-terminus 31 83 1.5E-19 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Thivi_0854 b23ab1499d91bc8540eb7c745034453b 292 Pfam PF01937 Protein of unknown function DUF89 5 271 1.3E-49 T 13-10-2018 IPR002791 Domain of unknown function DUF89 Thivi_0854 b23ab1499d91bc8540eb7c745034453b 292 Gene3D G3DSA:3.40.50.10880 135 280 1.3E-52 T 13-10-2018 Thivi_0854 b23ab1499d91bc8540eb7c745034453b 292 PIRSF PIRSF006593 1 281 1.9E-86 T 13-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 Thivi_0854 b23ab1499d91bc8540eb7c745034453b 292 Gene3D G3DSA:1.10.285.20 68 133 3.1E-15 T 13-10-2018 Thivi_0854 b23ab1499d91bc8540eb7c745034453b 292 SUPERFAMILY SSF111321 1 277 1.31E-80 T 13-10-2018 IPR036075 AF1104-like superfamily Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 Pfam PF01311 Bacterial export proteins, family 1 14 243 3.9E-69 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 253 3.9E-71 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.9E-28 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.9E-28 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.9E-28 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Thivi_0370 87a88b88571cddc40ad29b8ea7a71e4a 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.9E-28 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 324 4.6E-131 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 363 37.643 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 5.0E-39 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 SMART SM00864 13 205 1.6E-113 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 Gene3D G3DSA:3.30.1330.20 221 331 6.0E-35 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 SMART SM00865 207 325 6.3E-57 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 SUPERFAMILY SSF55307 205 318 3.89E-42 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 Pfam PF12327 FtsZ family, C-terminal domain 222 316 5.3E-37 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 SUPERFAMILY SSF52490 13 208 4.19E-68 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.9E-49 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Thivi_2313 eed65972ac0fb29bbcbba2cb0d3044c9 390 Gene3D G3DSA:3.40.50.1440 3 220 6.5E-79 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Thivi_3398 eadca5f1d460f3b77c101fa41892142e 220 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 17 197 1.1E-54 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_3398 eadca5f1d460f3b77c101fa41892142e 220 PIRSF PIRSF006091 7 208 1.4E-66 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_3398 eadca5f1d460f3b77c101fa41892142e 220 SMART SM00900 104 196 3.7E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_3398 eadca5f1d460f3b77c101fa41892142e 220 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 10 198 25.127 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_3398 eadca5f1d460f3b77c101fa41892142e 220 Pfam PF04205 FMN-binding domain 104 191 5.5E-18 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_1024 ae25368b79bcc29f587ba7ffb9bcd2a2 420 Pfam PF13660 Domain of unknown function (DUF4147) 11 218 5.3E-47 T 13-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Thivi_1024 ae25368b79bcc29f587ba7ffb9bcd2a2 420 Pfam PF05161 MOFRL family 309 413 7.3E-34 T 13-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Thivi_1024 ae25368b79bcc29f587ba7ffb9bcd2a2 420 Gene3D G3DSA:3.40.50.10180 41 259 1.0E-103 T 13-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Thivi_1024 ae25368b79bcc29f587ba7ffb9bcd2a2 420 SUPERFAMILY SSF82544 6 417 1.44E-99 T 13-10-2018 Thivi_1024 ae25368b79bcc29f587ba7ffb9bcd2a2 420 Gene3D G3DSA:3.40.1480.10 260 414 1.0E-103 T 13-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Thivi_2782 c042dd7e6218993dbac3a53613598939 616 Gene3D G3DSA:3.40.50.720 142 267 4.2E-37 T 13-10-2018 Thivi_2782 c042dd7e6218993dbac3a53613598939 616 SUPERFAMILY SSF51735 286 547 9.58E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2782 c042dd7e6218993dbac3a53613598939 616 SUPERFAMILY SSF51735 144 274 2.24E-16 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2782 c042dd7e6218993dbac3a53613598939 616 Pfam PF13727 CoA-binding domain 65 241 1.1E-20 T 13-10-2018 Thivi_2782 c042dd7e6218993dbac3a53613598939 616 Gene3D G3DSA:3.40.50.720 282 601 2.7E-109 T 13-10-2018 Thivi_2782 c042dd7e6218993dbac3a53613598939 616 Pfam PF02719 Polysaccharide biosynthesis protein 286 568 4.9E-114 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SUPERFAMILY SSF50249 646 725 1.6E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SMART SM00316 644 727 3.5E-12 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SMART SM00357 96 155 1.8E-17 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SMART SM00357 160 224 2.4 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SMART SM00955 270 598 4.2E-181 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SUPERFAMILY SSF50249 230 643 2.28E-145 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 77 726 7.7E-236 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SUPERFAMILY SSF50249 148 246 2.78E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Hamap MF_01895 Ribonuclease R [rnr]. 48 727 57.653 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Pfam PF00773 RNB domain 270 597 2.5E-108 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 ProSitePatterns PS01175 Ribonuclease II family signature. 565 589 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Pfam PF08206 Ribonuclease B OB domain 97 154 5.4E-21 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Pfam PF08206 Ribonuclease B OB domain 169 223 4.5E-6 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Gene3D G3DSA:2.40.50.140 647 747 1.4E-21 T 13-10-2018 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 SUPERFAMILY SSF50249 77 157 3.86E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 TIGRFAM TIGR02063 RNase_R: ribonuclease R 29 725 8.8E-269 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Pfam PF00575 S1 RNA binding domain 644 724 9.4E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Gene3D G3DSA:2.40.50.140 85 156 1.5E-18 T 13-10-2018 Thivi_0516 10b48bf584bd25d7b87e6d35960bb096 813 Gene3D G3DSA:2.40.50.140 157 224 9.9E-6 T 13-10-2018 Thivi_2349 ec04d5b559e352db55f686a4a66e87d8 244 Gene3D G3DSA:3.40.30.10 67 244 3.1E-44 T 13-10-2018 Thivi_2349 ec04d5b559e352db55f686a4a66e87d8 244 SUPERFAMILY SSF52833 65 242 3.48E-47 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2349 ec04d5b559e352db55f686a4a66e87d8 244 Pfam PF00578 AhpC/TSA family 71 189 1.4E-16 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 PIRSF PIRSF001394 10 523 1.5E-209 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 Pfam PF05683 Fumarase C-terminus 306 508 3.1E-80 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 Gene3D G3DSA:3.20.130.10 328 508 8.2E-57 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 343 507 1.3E-44 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 30 301 1.2E-63 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 Pfam PF05681 Fumarate hydratase (Fumerase) 29 302 5.8E-101 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Thivi_4525 0d28bdcbddb106c4269e13be3e477df5 525 SUPERFAMILY SSF117457 336 506 1.15E-59 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Thivi_4336 55aa49027ad573866a52b78138c41177 445 SUPERFAMILY SSF47384 225 293 6.67E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4336 55aa49027ad573866a52b78138c41177 445 Gene3D G3DSA:1.10.287.130 186 289 2.8E-9 T 13-10-2018 Thivi_4336 55aa49027ad573866a52b78138c41177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4336 55aa49027ad573866a52b78138c41177 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 3.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4336 55aa49027ad573866a52b78138c41177 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 444 2.5E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4336 55aa49027ad573866a52b78138c41177 445 Gene3D G3DSA:3.30.565.10 305 445 6.0E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4336 55aa49027ad573866a52b78138c41177 445 SMART SM00387 341 445 2.4E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4336 55aa49027ad573866a52b78138c41177 445 SMART SM00388 239 296 0.0025 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4336 55aa49027ad573866a52b78138c41177 445 SUPERFAMILY SSF55874 304 444 2.36E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 SUPERFAMILY SSF52172 7 132 1.71E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 Pfam PF00072 Response regulator receiver domain 11 122 1.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 Gene3D G3DSA:3.40.50.2300 2 129 8.6E-35 T 13-10-2018 Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 302 1.1E-48 T 13-10-2018 IPR000160 GGDEF domain Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 SUPERFAMILY SSF55073 144 301 4.24E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 SMART SM00267 128 304 3.3E-58 T 13-10-2018 IPR000160 GGDEF domain Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 Gene3D G3DSA:3.30.70.270 130 302 2.0E-55 T 13-10-2018 Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 299 4.1E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_3992 33d4b364896dc7f7515d1b1954e5404c 306 SMART SM00448 9 122 1.3E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 20 459 2.9E-209 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 Pfam PF07724 AAA domain (Cdc48 subfamily) 206 345 1.6E-37 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 17 459 42.786 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 SMART SM01086 351 447 1.4E-21 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 SUPERFAMILY SSF52540 20 456 1.76E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 69 190 1.1E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 Gene3D G3DSA:1.10.8.60 351 456 1.9E-39 T 13-10-2018 Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 351 422 2.4E-5 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_1735 c5ea0840fe9828225959c073c03a684d 459 SMART SM00382 65 348 6.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1029 a97e312dcb4aa3095838400481b016f6 240 SUPERFAMILY SSF53335 14 236 1.02E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1029 a97e312dcb4aa3095838400481b016f6 240 Pfam PF13489 Methyltransferase domain 51 198 1.8E-21 T 13-10-2018 Thivi_1029 a97e312dcb4aa3095838400481b016f6 240 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 231 5.4E-81 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Thivi_1029 a97e312dcb4aa3095838400481b016f6 240 Gene3D G3DSA:3.40.50.150 12 236 2.8E-71 T 13-10-2018 Thivi_1029 a97e312dcb4aa3095838400481b016f6 240 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 237 36.276 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 41 138 2.4E-16 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 41 292 24.841 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 190 289 1.7E-29 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 SUPERFAMILY SSF63848 188 292 5.1E-30 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 42 292 5.7E-64 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 Gene3D G3DSA:3.30.750.120 36 158 1.5E-27 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Thivi_2709 7c8ec17c3b42d0204d45803b46e2a598 292 Gene3D G3DSA:2.160.20.70 184 292 2.2E-30 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Thivi_4057 d10f7a5502a553cb212bcaf2a2496c02 301 SUPERFAMILY SSF53448 8 224 6.4E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4057 d10f7a5502a553cb212bcaf2a2496c02 301 Gene3D G3DSA:3.90.550.10 1 241 6.8E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4057 d10f7a5502a553cb212bcaf2a2496c02 301 Pfam PF00535 Glycosyl transferase family 2 11 122 1.1E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 315 1.2E-28 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 SMART SM01400 6 123 1.1E-74 T 13-10-2018 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 Gene3D G3DSA:3.40.50.2020 150 292 1.1E-125 T 13-10-2018 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 Gene3D G3DSA:3.40.50.2020 9 304 1.1E-125 T 13-10-2018 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 8.7E-47 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 316 49.001 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 315 2.4E-117 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Thivi_4178 f1f271657f4af9acb9475dedb99d3282 317 SUPERFAMILY SSF53271 71 307 1.55E-64 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_3735 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3735 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3714 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3714 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3013 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3013 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3547 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3547 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1640 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1640 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1460 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1460 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_4271 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4271 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3717 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3717 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3552 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3552 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_4510 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4510 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3891 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3891 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1418 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1418 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_4511 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4511 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_0423 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0423 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1658 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1658 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_2966 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2966 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1308 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1308 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_0595 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0595 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3585 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF01609 Transposase DDE domain 107 343 8.5E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_3585 d39856c57d2b32a5e45edf33422ea284 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 Pfam PF00849 RNA pseudouridylate synthase 81 209 3.6E-16 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 SUPERFAMILY SSF55120 80 250 8.63E-44 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 Gene3D G3DSA:3.30.2350.10 75 260 5.5E-50 T 13-10-2018 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 85 246 3.1E-52 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 Gene3D G3DSA:3.10.290.10 12 72 4.5E-19 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 SMART SM00363 17 79 2.8E-7 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 Pfam PF01479 S4 domain 17 62 1.3E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 SUPERFAMILY SSF55174 17 109 2.5E-15 T 13-10-2018 Thivi_4296 0aa701a6aa2c1dfcb6d49776f4710dba 299 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 119 133 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Thivi_1343 a87ef7a44625d66b22ebb9a4cd67c05b 301 SUPERFAMILY SSF55797 172 297 5.23E-16 T 13-10-2018 IPR035940 CAP superfamily Thivi_1343 a87ef7a44625d66b22ebb9a4cd67c05b 301 Pfam PF00188 Cysteine-rich secretory protein family 177 287 9.3E-12 T 13-10-2018 IPR014044 CAP domain Thivi_1343 a87ef7a44625d66b22ebb9a4cd67c05b 301 Gene3D G3DSA:3.40.33.10 149 297 5.4E-27 T 13-10-2018 IPR035940 CAP superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00052 844 1090 1.6E-125 T 13-10-2018 IPR001633 EAL domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00091 374 443 6.5E-4 T 13-10-2018 IPR000014 PAS domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00448 5 119 4.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF08447 PAS fold 398 483 7.0E-22 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.20.20.450 847 1098 4.3E-105 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF00990 Diguanylate cyclase, GGDEF domain 673 829 5.4E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF55073 678 834 1.1E-37 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF141868 849 1097 3.01E-93 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF55781 194 364 1.26E-24 T 13-10-2018 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00267 662 835 5.6E-42 T 13-10-2018 IPR000160 GGDEF domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF52172 5 139 2.13E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF00072 Response regulator receiver domain 7 119 8.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF13185 GAF domain 519 661 2.0E-19 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF13185 GAF domain 209 345 3.4E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.30.450.40 206 356 4.7E-29 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF55785 379 493 1.77E-22 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SUPERFAMILY SSF55781 520 661 7.63E-18 T 13-10-2018 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.30.70.270 669 846 1.1E-45 T 13-10-2018 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00086 448 490 2.2E-10 T 13-10-2018 IPR001610 PAC motif Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.30.450.40 491 668 2.1E-22 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1321 ac870df06a008f781881ac166e615d05 1110 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 670 833 5.4E-30 T 13-10-2018 IPR000160 GGDEF domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.30.450.20 367 488 7.4E-32 T 13-10-2018 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-31 T 13-10-2018 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 Pfam PF00563 EAL domain 850 1085 1.5E-74 T 13-10-2018 IPR001633 EAL domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 495 3.7E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00065 495 670 0.0059 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1321 ac870df06a008f781881ac166e615d05 1110 SMART SM00065 210 356 3.4E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 301 1.4E-84 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 SUPERFAMILY SSF55021 327 413 3.97E-27 T 13-10-2018 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 SUPERFAMILY SSF55021 410 503 5.49E-27 T 13-10-2018 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Gene3D G3DSA:3.40.1020.10 328 504 1.7E-72 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 SUPERFAMILY SSF53686 4 355 2.1E-106 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Gene3D G3DSA:3.40.50.1100 14 317 2.6E-137 T 13-10-2018 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 503 2.7E-245 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 503 5.5E-24 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 1.2E-27 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Thivi_3675 95c5a0ac404c0978238f6f58884ca307 524 Gene3D G3DSA:3.40.50.1100 50 146 2.6E-137 T 13-10-2018 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 Gene3D G3DSA:3.30.1390.10 55 125 5.1E-32 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 SUPERFAMILY SSF54736 54 125 3.66E-25 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.7E-18 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 SUPERFAMILY SSF48300 4 61 8.24E-17 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 5.0E-49 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.6E-31 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 25.439 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 125 5.0E-21 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4193 a8771da7c55e21b46aa84655e582449e 125 Gene3D G3DSA:1.20.5.710 2 54 7.0E-21 T 13-10-2018 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SUPERFAMILY SSF55874 274 442 4.71E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Gene3D G3DSA:3.40.50.2300 453 581 6.1E-21 T 13-10-2018 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SUPERFAMILY SSF55785 72 195 7.33E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SMART SM00448 464 577 1.2E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Gene3D G3DSA:3.30.450.20 72 202 4.7E-17 T 13-10-2018 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 219 285 1.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Gene3D G3DSA:1.10.287.130 203 285 6.0E-16 T 13-10-2018 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Pfam PF00989 PAS fold 86 148 2.1E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SMART SM00387 331 444 4.0E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SMART SM00091 85 151 5.7E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 443 4.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SUPERFAMILY SSF52172 464 580 1.11E-23 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 205 3.9E-9 T 13-10-2018 IPR000014 PAS domain Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Gene3D G3DSA:3.30.565.10 286 445 6.2E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SUPERFAMILY SSF47384 212 287 1.9E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 6.5E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.5E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 6.5E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.5E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 SMART SM00388 218 285 4.2E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2575 e60e4ac28f81bb375dcf64c66586572c 586 Pfam PF00072 Response regulator receiver domain 466 576 1.3E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0287 75e2c4e008f1a34ed7053cd894215262 106 SMART SM01248 21 102 1.7E-47 T 13-10-2018 IPR011649 KaiB domain GO:0048511 Thivi_0287 75e2c4e008f1a34ed7053cd894215262 106 Gene3D G3DSA:3.40.30.10 12 105 4.0E-36 T 13-10-2018 Thivi_0287 75e2c4e008f1a34ed7053cd894215262 106 Pfam PF07689 KaiB domain 21 101 1.4E-25 T 13-10-2018 IPR011649 KaiB domain GO:0048511 Thivi_0287 75e2c4e008f1a34ed7053cd894215262 106 SUPERFAMILY SSF52833 12 103 4.13E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 SUPERFAMILY SSF51351 1 248 2.62E-92 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 Pfam PF00121 Triosephosphate isomerase 5 246 3.5E-90 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 3.7E-65 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 Gene3D G3DSA:3.20.20.70 1 251 4.9E-99 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3909 ddc7e41f3e28ea37f23f8bfa7cacb2ce 254 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 60.052 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 SUPERFAMILY SSF55021 310 387 8.74E-14 T 13-10-2018 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 Gene3D G3DSA:3.40.50.720 20 297 2.3E-72 T 13-10-2018 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 SUPERFAMILY SSF52283 6 106 3.19E-20 T 13-10-2018 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 306 2.8E-20 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 Gene3D G3DSA:3.40.50.720 83 272 2.3E-72 T 13-10-2018 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 274 9.4E-40 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 Gene3D G3DSA:3.30.70.260 308 387 4.1E-16 T 13-10-2018 Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 SUPERFAMILY SSF51735 83 274 6.4E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_2122 d87d5a24c055f1c238b3766128e6896e 389 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 Pfam PF13740 ACT domain 7 76 6.5E-12 T 13-10-2018 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 Pfam PF13740 ACT domain 92 165 6.1E-7 T 13-10-2018 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 SUPERFAMILY SSF55021 2 76 4.04E-13 T 13-10-2018 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 Gene3D G3DSA:3.30.70.260 89 168 1.3E-14 T 13-10-2018 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 SUPERFAMILY SSF55021 91 158 4.58E-10 T 13-10-2018 Thivi_3365 3a0448411368ddc01f05ba2d8b87bd92 173 Gene3D G3DSA:3.30.70.260 3 81 4.2E-17 T 13-10-2018 Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 SUPERFAMILY SSF53335 62 271 3.7E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 PIRSF PIRSF000401 1 293 1.3E-76 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 Gene3D G3DSA:3.40.50.150 102 295 6.4E-55 T 13-10-2018 Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 2.3E-84 T 13-10-2018 Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 31.138 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Thivi_1103 5bb7836a1baa00e9332abd1aa3154aba 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 6.5E-82 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Thivi_4483 6890e38ae0f616773d90d0fe320b614b 201 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 183 3.7E-69 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_4483 6890e38ae0f616773d90d0fe320b614b 201 PIRSF PIRSF000013 1 194 2.6E-71 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Thivi_4483 6890e38ae0f616773d90d0fe320b614b 201 Gene3D G3DSA:1.10.3820.10 7 189 1.3E-42 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Thivi_4483 6890e38ae0f616773d90d0fe320b614b 201 SUPERFAMILY SSF48695 22 186 1.28E-47 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Pfam PF08448 PAS fold 222 340 1.8E-8 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Pfam PF08448 PAS fold 97 205 1.1E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Gene3D G3DSA:3.30.450.20 210 350 9.4E-20 T 13-10-2018 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SMART SM00387 472 582 4.9E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Gene3D G3DSA:3.30.565.10 429 582 9.5E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 4.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 4.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 579 4.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 4.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Gene3D G3DSA:1.10.287.130 365 427 1.3E-9 T 13-10-2018 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SUPERFAMILY SSF55785 201 336 2.44E-11 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Gene3D G3DSA:3.30.450.20 76 209 1.2E-12 T 13-10-2018 Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SMART SM00091 216 286 26.0 T 13-10-2018 IPR000014 PAS domain Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SMART SM00091 89 155 0.0036 T 13-10-2018 IPR000014 PAS domain Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SUPERFAMILY SSF55785 87 178 1.74E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 86 210 1.3E-6 T 13-10-2018 IPR000014 PAS domain Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 SUPERFAMILY SSF55874 416 580 1.05E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4079 04985cfbac5f540101da690e4f679aaf 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 581 8.9E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 Pfam PF02629 CoA binding domain 9 99 4.9E-27 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 Gene3D G3DSA:3.40.50.720 2 123 2.2E-47 T 13-10-2018 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 Gene3D G3DSA:3.40.50.261 124 289 2.5E-70 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 Pfam PF00549 CoA-ligase 151 271 7.9E-18 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 SUPERFAMILY SSF52210 123 288 8.9E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 PIRSF PIRSF001553 1 290 4.9E-124 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 3.9E-138 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 SMART SM00881 4 100 2.8E-33 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.9E-36 T 13-10-2018 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.9E-36 T 13-10-2018 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.9E-36 T 13-10-2018 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.9E-36 T 13-10-2018 Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 SUPERFAMILY SSF51735 1 122 1.13E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3358 d3f06c69302fa09cebcce653fe901e28 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 41.501 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_2130 3f084d3d511553544d12d76316a72497 429 Gene3D G3DSA:3.60.15.10 8 258 5.1E-81 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2130 3f084d3d511553544d12d76316a72497 429 Pfam PF00753 Metallo-beta-lactamase superfamily 45 183 1.1E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_2130 3f084d3d511553544d12d76316a72497 429 SUPERFAMILY SSF52218 272 413 3.15E-38 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_2130 3f084d3d511553544d12d76316a72497 429 PIRSF PIRSF005243 10 418 8.8E-126 T 13-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Thivi_2130 3f084d3d511553544d12d76316a72497 429 SMART SM00849 45 238 2.6E-34 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_2130 3f084d3d511553544d12d76316a72497 429 Pfam PF00258 Flavodoxin 274 404 5.4E-11 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Thivi_2130 3f084d3d511553544d12d76316a72497 429 Gene3D G3DSA:3.40.50.360 271 423 4.3E-43 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_2130 3f084d3d511553544d12d76316a72497 429 SUPERFAMILY SSF56281 17 256 6.03E-47 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2130 3f084d3d511553544d12d76316a72497 429 ProSitePatterns PS00201 Flavodoxin signature. 274 290 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 Pfam PF00563 EAL domain 155 202 6.0E-7 T 13-10-2018 IPR001633 EAL domain Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 PIRSF PIRSF003180 7 408 2.8E-82 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 SUPERFAMILY SSF109604 193 405 5.65E-37 T 13-10-2018 Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 Pfam PF08668 HDOD domain 217 335 1.8E-17 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 Gene3D G3DSA:3.20.20.450 6 210 3.3E-9 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 Gene3D G3DSA:1.10.3210.10 215 400 8.4E-27 T 13-10-2018 Thivi_0650 d659d88ffb4666e0cbdeacf22f080f19 410 SUPERFAMILY SSF141868 10 205 1.11E-17 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 25 177 2.8E-44 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 344 7.2E-22 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 SUPERFAMILY SSF55120 15 348 4.46E-90 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 Gene3D G3DSA:3.30.2350.20 25 344 9.6E-113 T 13-10-2018 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 13 349 26.105 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 Gene3D G3DSA:3.30.2340.10 176 309 9.6E-113 T 13-10-2018 Thivi_0504 6a6f3090318d5cc0c6f2c6d10b6bbf5e 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 85 98 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 SUPERFAMILY SSF141523 55 164 8.11E-31 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 PIRSF PIRSF029342 194 250 8.6 T 13-10-2018 IPR016915 Uncharacterised conserved protein UCP029342 Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 PIRSF PIRSF029342 259 335 4.8E-4 T 13-10-2018 IPR016915 Uncharacterised conserved protein UCP029342 Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 PIRSF PIRSF029342 8 199 5.6E-69 T 13-10-2018 IPR016915 Uncharacterised conserved protein UCP029342 Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 Gene3D G3DSA:2.40.440.10 53 164 3.6E-29 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4140 003e6a62ef1dbfb00a517df1f3b35488 335 Pfam PF03734 L,D-transpeptidase catalytic domain 57 164 5.8E-21 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 Gene3D G3DSA:1.20.5.250 1 44 4.4E-21 T 13-10-2018 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 Pfam PF00556 Antenna complex alpha/beta subunit 10 44 8.0E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 11 42 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 PIRSF PIRSF002900 1 44 3.1E-15 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 PRINTS PR00674 Light harvesting protein B chain signature 26 43 4.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 PRINTS PR00674 Light harvesting protein B chain signature 6 26 4.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0276 b1c9a035894304dc9095bd27effc28eb 44 SUPERFAMILY SSF56918 3 44 3.66E-12 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 7 150 1.7E-65 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 5 320 2.4E-154 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 7 318 50.914 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 Gene3D G3DSA:3.90.226.10 2 320 1.8E-120 T 13-10-2018 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 6.7E-50 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0840 488fce373921cd0ce0c5663d2724fa83 321 SUPERFAMILY SSF52096 7 318 4.02E-104 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_4401 e1aa99b359a911a743fbd3f6f02240d3 139 SMART SM00411 10 97 7.1E-11 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_4401 e1aa99b359a911a743fbd3f6f02240d3 139 Gene3D G3DSA:4.10.520.10 7 97 1.4E-11 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_4401 e1aa99b359a911a743fbd3f6f02240d3 139 Pfam PF00216 Bacterial DNA-binding protein 10 96 1.3E-12 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_4401 e1aa99b359a911a743fbd3f6f02240d3 139 SUPERFAMILY SSF47729 10 96 6.33E-13 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_0058 b6fd48ca793fc40a11c4c6d194ec579d 365 SUPERFAMILY SSF143631 49 357 3.66E-90 T 13-10-2018 IPR003374 ApbE-like superfamily Thivi_0058 b6fd48ca793fc40a11c4c6d194ec579d 365 Gene3D G3DSA:3.10.520.20 44 363 4.4E-107 T 13-10-2018 Thivi_0058 b6fd48ca793fc40a11c4c6d194ec579d 365 Pfam PF02424 ApbE family 56 339 1.1E-79 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_0058 b6fd48ca793fc40a11c4c6d194ec579d 365 PIRSF PIRSF006268 16 353 9.1E-85 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SMART SM00091 386 453 1.1E-6 T 13-10-2018 IPR000014 PAS domain Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SMART SM00091 509 576 65.0 T 13-10-2018 IPR000014 PAS domain Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Pfam PF13426 PAS domain 397 499 1.8E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SUPERFAMILY SSF55785 397 509 4.54E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0849 d8247ed7be1456af083558362f962e2e 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 798 808 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 794 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 846 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 PRINTS PR00344 Bacterial sensor protein C-terminal signature 809 827 3.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Gene3D G3DSA:3.30.450.20 381 505 6.1E-24 T 13-10-2018 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Gene3D G3DSA:1.10.287.130 632 694 8.1E-20 T 13-10-2018 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 742 848 2.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SMART SM00387 739 849 3.0E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SMART SM00388 627 697 2.1E-4 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SUPERFAMILY SSF47384 625 691 1.06E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Pfam PF00512 His Kinase A (phospho-acceptor) domain 628 691 1.8E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0849 d8247ed7be1456af083558362f962e2e 864 Gene3D G3DSA:3.30.565.10 698 850 2.6E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0849 d8247ed7be1456af083558362f962e2e 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 382 508 2.1E-21 T 13-10-2018 IPR000014 PAS domain Thivi_0849 d8247ed7be1456af083558362f962e2e 864 SUPERFAMILY SSF55874 683 847 6.16E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2858 703661363bd137261ccbdf2306390fa2 174 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.158 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 Gene3D G3DSA:3.40.50.300 3 173 5.1E-58 T 13-10-2018 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 Pfam PF01202 Shikimate kinase 13 169 2.8E-54 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 SUPERFAMILY SSF52540 5 168 2.7E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2858 703661363bd137261ccbdf2306390fa2 174 PRINTS PR01100 Shikimate kinase family signature 98 115 1.9E-23 T 13-10-2018 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 PRINTS PR01100 Shikimate kinase family signature 7 22 1.9E-23 T 13-10-2018 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 PRINTS PR01100 Shikimate kinase family signature 31 44 1.9E-23 T 13-10-2018 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 PRINTS PR01100 Shikimate kinase family signature 77 86 1.9E-23 T 13-10-2018 Thivi_2858 703661363bd137261ccbdf2306390fa2 174 PRINTS PR01100 Shikimate kinase family signature 59 67 1.9E-23 T 13-10-2018 Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 Gene3D G3DSA:1.10.10.10 152 230 6.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 Pfam PF13545 Crp-like helix-turn-helix domain 157 230 8.9E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 SMART SM00100 19 137 3.0E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 Pfam PF00027 Cyclic nucleotide-binding domain 38 119 4.6E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 Gene3D G3DSA:2.60.120.10 4 151 1.8E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 SMART SM00419 175 223 1.4E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 SUPERFAMILY SSF51206 13 146 6.28E-27 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_4247 95a832bcf29134837ccbec96b7b06b5f 256 SUPERFAMILY SSF46785 155 231 3.74E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3865 02fa4fd5c9681d5dbd8624d1489e03a4 254 Gene3D G3DSA:1.10.10.2560 135 235 6.6E-81 T 13-10-2018 Thivi_3865 02fa4fd5c9681d5dbd8624d1489e03a4 254 Gene3D G3DSA:3.40.50.150 19 245 6.6E-81 T 13-10-2018 Thivi_3865 02fa4fd5c9681d5dbd8624d1489e03a4 254 Pfam PF08241 Methyltransferase domain 42 129 2.1E-15 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_3865 02fa4fd5c9681d5dbd8624d1489e03a4 254 SUPERFAMILY SSF53335 6 225 9.48E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 Pfam PF04397 LytTr DNA-binding domain 153 246 1.7E-19 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 Gene3D G3DSA:2.40.50.40 143 207 8.9E-6 T 13-10-2018 Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 SUPERFAMILY SSF52172 1 119 1.99E-26 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 SMART SM00448 1 113 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 SMART SM00850 150 247 1.1E-24 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Thivi_2222 42303ae9b3dfd4106c589bfc4ca2932b 255 Gene3D G3DSA:3.40.50.2300 1 125 4.9E-25 T 13-10-2018 Thivi_1502 632651290a2b35b7ffd385d5c804bbb7 553 Gene3D G3DSA:3.40.50.300 183 487 2.6E-50 T 13-10-2018 Thivi_1502 632651290a2b35b7ffd385d5c804bbb7 553 SUPERFAMILY SSF52540 144 468 6.57E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1502 632651290a2b35b7ffd385d5c804bbb7 553 Gene3D G3DSA:1.10.8.730 243 357 2.6E-50 T 13-10-2018 Thivi_1502 632651290a2b35b7ffd385d5c804bbb7 553 Pfam PF12846 AAA-like domain 191 441 2.9E-9 T 13-10-2018 Thivi_2985 299aafb683d55cf7a165d70534178b35 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2985 299aafb683d55cf7a165d70534178b35 222 Pfam PF00005 ABC transporter 18 165 1.2E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2985 299aafb683d55cf7a165d70534178b35 222 SMART SM00382 27 221 6.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2985 299aafb683d55cf7a165d70534178b35 222 Gene3D G3DSA:3.40.50.300 1 221 2.9E-61 T 13-10-2018 Thivi_2985 299aafb683d55cf7a165d70534178b35 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.3E-85 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Thivi_2985 299aafb683d55cf7a165d70534178b35 222 SUPERFAMILY SSF52540 1 218 3.42E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2063 7d65e119a4266c746b2c5e29058f66eb 358 SUPERFAMILY SSF53300 100 293 1.81E-22 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2063 7d65e119a4266c746b2c5e29058f66eb 358 SMART SM00327 100 279 4.0E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2063 7d65e119a4266c746b2c5e29058f66eb 358 Pfam PF13519 von Willebrand factor type A domain 103 213 1.6E-16 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2063 7d65e119a4266c746b2c5e29058f66eb 358 Gene3D G3DSA:3.40.50.410 98 305 9.1E-40 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2975 a2147a1496c3707cdabaa73fcfe93fcd 122 Gene3D G3DSA:1.10.760.10 17 112 4.4E-11 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2975 a2147a1496c3707cdabaa73fcfe93fcd 122 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 27 100 8.6E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2975 a2147a1496c3707cdabaa73fcfe93fcd 122 SUPERFAMILY SSF46626 6 105 8.36E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3198 7f452a4f198315c86825f175c0801c33 178 SUPERFAMILY SSF56420 3 164 1.09E-60 T 13-10-2018 IPR036821 Peptide deformylase superfamily Thivi_3198 7f452a4f198315c86825f175c0801c33 178 Gene3D G3DSA:3.90.45.10 1 167 1.1E-62 T 13-10-2018 IPR036821 Peptide deformylase superfamily Thivi_3198 7f452a4f198315c86825f175c0801c33 178 Pfam PF01327 Polypeptide deformylase 5 152 2.0E-50 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-38 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-38 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-38 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-38 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.359 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 PIRSF PIRSF004749 1 173 1.6E-56 T 13-10-2018 IPR023635 Peptide deformylase Thivi_3198 7f452a4f198315c86825f175c0801c33 178 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 160 3.5E-56 T 13-10-2018 IPR023635 Peptide deformylase Thivi_4331 ecf942d3c4a80928937e07c4eceb2b06 627 Pfam PF00884 Sulfatase 237 469 9.8E-17 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Thivi_4331 ecf942d3c4a80928937e07c4eceb2b06 627 SUPERFAMILY SSF53649 279 468 1.81E-17 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Thivi_4331 ecf942d3c4a80928937e07c4eceb2b06 627 Gene3D G3DSA:3.40.720.10 230 528 2.2E-30 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 SUPERFAMILY SSF110921 397 505 5.89E-14 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 Pfam PF00682 HMGL-like 8 275 1.3E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 Gene3D G3DSA:3.20.20.70 7 325 3.3E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 204 217 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 Gene3D G3DSA:3.30.160.340 448 510 1.4E-23 T 13-10-2018 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 505 7.6E-21 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 Gene3D G3DSA:3.30.160.740 392 447 9.5E-15 T 13-10-2018 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 SUPERFAMILY SSF51569 5 292 3.48E-68 T 13-10-2018 Thivi_0250 9b8f0dd6c3e977526d986bb97db67483 513 SMART SM00917 370 506 6.7E-10 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_0248 254e21009be3efc5301f2b2376705a51 85 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 9 84 8.4E-36 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted Thivi_0248 254e21009be3efc5301f2b2376705a51 85 Pfam PF13937 Domain of unknown function (DUF4212) 7 83 7.0E-36 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 166 337 2.7E-48 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Pfam PF10531 SLBB domain 361 409 1.8E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 448 531 1.7E-34 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Gene3D G3DSA:3.10.20.600 350 444 1.1E-33 T 13-10-2018 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 SUPERFAMILY SSF142984 359 442 1.7E-25 T 13-10-2018 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 100 6.8E-7 T 13-10-2018 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Gene3D G3DSA:3.40.30.10 19 118 1.6E-14 T 13-10-2018 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Gene3D G3DSA:1.20.1440.230 445 535 4.9E-35 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 SMART SM00928 447 492 4.8E-23 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 SUPERFAMILY SSF142019 117 358 9.02E-92 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 Gene3D G3DSA:3.40.50.11540 171 348 5.2E-81 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 SUPERFAMILY SSF52833 21 112 2.35E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 SUPERFAMILY SSF140490 444 534 4.18E-36 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1126 da5649f9ba34a888cf9058a1f709bf86 536 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 460 471 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 SUPERFAMILY SSF54826 4 107 7.07E-18 T 13-10-2018 Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 5 344 21.837 T 13-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 Pfam PF13378 Enolase C-terminal domain-like 147 350 4.3E-27 T 13-10-2018 IPR029065 Enolase C-terminal domain-like Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 SUPERFAMILY SSF51604 122 347 9.04E-45 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 9 326 1.0E-42 T 13-10-2018 Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 Gene3D G3DSA:3.20.20.120 119 345 2.6E-51 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 182 213 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 SMART SM00922 139 232 6.1E-15 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Thivi_2435 a037b626ed6cd807f88af0266060dd6f 352 Gene3D G3DSA:3.30.390.10 3 118 6.7E-25 T 13-10-2018 IPR029017 Enolase-like, N-terminal Thivi_2049 cc08f3e59af299666537f7106e358e09 722 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 188 200 - T 13-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 53 76 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 Gene3D G3DSA:3.30.200.20 8 149 1.7E-60 T 13-10-2018 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 Pfam PF00069 Protein kinase domain 47 269 1.4E-27 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 Gene3D G3DSA:1.10.510.10 150 318 1.7E-60 T 13-10-2018 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 SMART SM00219 47 319 2.3E-8 T 13-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 Thivi_2049 cc08f3e59af299666537f7106e358e09 722 SUPERFAMILY SSF56112 44 390 4.72E-53 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 Gene3D G3DSA:3.40.50.300 136 320 3.4E-61 T 13-10-2018 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 SUPERFAMILY SSF52540 149 391 7.74E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 SUPERFAMILY SSF46689 363 452 1.19E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 9.7E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 452 9.7E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 Gene3D G3DSA:1.10.8.60 321 387 1.2E-18 T 13-10-2018 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 Gene3D G3DSA:1.10.10.60 395 453 1.1E-14 T 13-10-2018 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 SUPERFAMILY SSF52172 23 194 1.62E-5 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 Pfam PF00158 Sigma-54 interaction domain 150 316 3.9E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 Pfam PF02954 Bacterial regulatory protein, Fis family 411 449 2.7E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_0868 38be55aa8a76109a4021bbb84983fe83 490 SMART SM00382 170 314 1.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3768 abb7dd87a4990dc3d1d4bd5c049f22cf 94 Gene3D G3DSA:2.170.150.40 2 93 2.3E-28 T 13-10-2018 Thivi_3768 abb7dd87a4990dc3d1d4bd5c049f22cf 94 Pfam PF04248 Domain of unknown function (DUF427) 3 88 6.3E-32 T 13-10-2018 IPR007361 Domain of unknown function DUF427 Thivi_1441 dbf3c13223cd493812c7f8c342bc8c4f 243 Gene3D G3DSA:3.90.70.30 54 239 4.0E-29 T 13-10-2018 IPR038156 Phytochelatin synthase, N-terminal domain superfamily MetaCyc: PWY-6745 Thivi_1441 dbf3c13223cd493812c7f8c342bc8c4f 243 Pfam PF05023 Phytochelatin synthase 74 234 8.4E-30 T 13-10-2018 IPR007719 Phytochelatin synthase, N-terminal catalytic domain GO:0010038|GO:0016756|GO:0046872|GO:0046938 MetaCyc: PWY-6745 Thivi_1441 dbf3c13223cd493812c7f8c342bc8c4f 243 SUPERFAMILY SSF54001 61 235 3.33E-33 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 SUPERFAMILY SSF48029 7 122 7.98E-23 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PIRSF PIRSF003161 2 336 7.4E-123 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Pfam PF01706 FliG C-terminal domain 221 327 6.5E-42 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 275 301 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 198 223 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 251 271 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 8 24 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 37 63 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 117 140 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 PRINTS PR00954 Flagellar motor switch protein FliG signature 229 249 5.7E-67 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 SUPERFAMILY SSF48029 117 328 1.44E-68 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Gene3D G3DSA:1.10.220.30 198 336 1.3E-45 T 13-10-2018 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Gene3D G3DSA:1.10.220.30 1 88 6.1E-20 T 13-10-2018 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Pfam PF14842 FliG N-terminal domain 8 108 9.2E-31 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 4 333 9.4E-110 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Pfam PF14841 FliG middle domain 118 191 6.2E-28 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Thivi_0359 ed40a8806c8fd638a3d7279abcf1c344 336 Gene3D G3DSA:1.10.220.30 92 194 9.3E-31 T 13-10-2018 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 Pfam PF08447 PAS fold 31 106 4.0E-13 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 SUPERFAMILY SSF58104 214 523 2.09E-78 T 13-10-2018 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 Gene3D G3DSA:3.30.450.20 12 144 1.5E-23 T 13-10-2018 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 SMART SM00283 261 522 1.7E-85 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 SMART SM00304 194 246 2.2E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 SUPERFAMILY SSF55785 20 114 5.23E-24 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 Gene3D G3DSA:1.10.287.950 193 523 2.6E-75 T 13-10-2018 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 305 489 1.2E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_3160 7a12431a3189b59c48ba0bf7bb8a78e1 523 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 110 1.7E-10 T 13-10-2018 IPR000014 PAS domain Thivi_2923 add63fb8db90edb3e21153ab56d1df95 340 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 8 329 2.5E-105 T 13-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 Thivi_2923 add63fb8db90edb3e21153ab56d1df95 340 Pfam PF03741 Integral membrane protein TerC family 72 292 1.0E-41 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 Thivi_1139 41845aa34189855685f2c43858037434 358 SUPERFAMILY SSF55326 10 173 5.83E-50 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1139 41845aa34189855685f2c43858037434 358 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 345 1.6E-35 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Thivi_1139 41845aa34189855685f2c43858037434 358 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 10 342 2.5E-130 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1139 41845aa34189855685f2c43858037434 358 Gene3D G3DSA:3.30.1330.10 9 174 3.0E-66 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1139 41845aa34189855685f2c43858037434 358 SUPERFAMILY SSF56042 176 346 9.12E-59 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1139 41845aa34189855685f2c43858037434 358 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 167 4.9E-14 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Thivi_1139 41845aa34189855685f2c43858037434 358 Gene3D G3DSA:3.90.650.10 176 356 2.7E-67 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1139 41845aa34189855685f2c43858037434 358 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 10 351 46.102 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Gene3D G3DSA:3.40.50.1980 59 484 7.8E-185 T 13-10-2018 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Gene3D G3DSA:3.40.50.1980 211 491 7.8E-185 T 13-10-2018 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Gene3D G3DSA:3.40.50.1980 70 210 7.8E-185 T 13-10-2018 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 70 501 3.3E-118 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 SUPERFAMILY SSF53807 3 522 3.14E-169 T 13-10-2018 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Gene3D G3DSA:1.20.89.10 321 507 7.8E-185 T 13-10-2018 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 Pfam PF11844 Domain of unknown function (DUF3364) 1 56 7.4E-22 T 13-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 523 8.1E-268 T 13-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 151 165 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_3649 235f1035460e21acfe606a491cd811ca 523 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 88 95 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.3E-102 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 Gene3D G3DSA:1.10.10.200 1 81 1.5E-33 T 13-10-2018 IPR017856 Integrase-like, N-terminal Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 Gene3D G3DSA:3.30.70.980 130 205 7.8E-61 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 37.373 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 SUPERFAMILY SSF75625 3 245 3.01E-99 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 Gene3D G3DSA:3.30.70.980 86 236 7.8E-61 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_0669 f245beea170ce2c4437ab2523adee8a1 249 Pfam PF01709 Transcriptional regulator 5 237 5.7E-99 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1383 8deee501e284bae6c60fdee66003401c 555 SMART SM00052 300 552 2.7E-55 T 13-10-2018 IPR001633 EAL domain Thivi_1383 8deee501e284bae6c60fdee66003401c 555 SUPERFAMILY SSF141868 306 553 1.57E-68 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1383 8deee501e284bae6c60fdee66003401c 555 Gene3D G3DSA:3.20.20.450 301 555 1.7E-76 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1383 8deee501e284bae6c60fdee66003401c 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 129 286 9.0E-25 T 13-10-2018 IPR000160 GGDEF domain Thivi_1383 8deee501e284bae6c60fdee66003401c 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 129 282 1.5E-26 T 13-10-2018 IPR000160 GGDEF domain Thivi_1383 8deee501e284bae6c60fdee66003401c 555 SMART SM00267 118 288 1.6E-27 T 13-10-2018 IPR000160 GGDEF domain Thivi_1383 8deee501e284bae6c60fdee66003401c 555 SUPERFAMILY SSF55073 132 289 8.63E-33 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1383 8deee501e284bae6c60fdee66003401c 555 Gene3D G3DSA:3.30.70.270 126 291 1.6E-36 T 13-10-2018 Thivi_1383 8deee501e284bae6c60fdee66003401c 555 Pfam PF00563 EAL domain 307 547 1.4E-56 T 13-10-2018 IPR001633 EAL domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SMART SM00471 113 484 4.1E-4 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Gene3D G3DSA:3.30.70.270 486 651 8.7E-51 T 13-10-2018 Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 TIGRFAM TIGR00277 HDIG: HDIG domain 119 216 1.9E-9 T 13-10-2018 IPR006675 HDIG domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SMART SM00267 478 652 2.7E-51 T 13-10-2018 IPR000160 GGDEF domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SUPERFAMILY SSF109604 18 286 8.84E-59 T 13-10-2018 Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Pfam PF01590 GAF domain 339 453 3.3E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SUPERFAMILY SSF55073 494 650 4.32E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Pfam PF00990 Diguanylate cyclase, GGDEF domain 489 648 1.5E-42 T 13-10-2018 IPR000160 GGDEF domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Pfam PF08668 HDOD domain 24 217 1.2E-49 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Gene3D G3DSA:3.30.450.40 332 485 8.4E-14 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SMART SM00065 339 486 2.7E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 SUPERFAMILY SSF55781 339 488 2.05E-12 T 13-10-2018 Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 650 1.3E-44 T 13-10-2018 IPR000160 GGDEF domain Thivi_4505 a1bc5b99748e2562e603243ab68adfaf 659 Gene3D G3DSA:1.10.3210.10 3 290 7.5E-68 T 13-10-2018 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Pfam PF08264 Anticodon-binding domain of tRNA 670 823 1.3E-44 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 SUPERFAMILY SSF46589 882 946 1.2E-15 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Gene3D G3DSA:3.40.50.620 335 551 4.2E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3494 57a74652b62754db526b4cd03732c495 949 SUPERFAMILY SSF50677 194 365 1.26E-48 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 SUPERFAMILY SSF47323 638 896 9.53E-73 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Gene3D G3DSA:1.10.287.380 875 947 2.3E-19 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Gene3D G3DSA:1.10.730.10 574 815 4.2E-72 T 13-10-2018 Thivi_3494 57a74652b62754db526b4cd03732c495 949 SUPERFAMILY SSF52374 3 637 5.42E-135 T 13-10-2018 Thivi_3494 57a74652b62754db526b4cd03732c495 949 PRINTS PR00986 Valyl-tRNA synthetase signature 502 520 2.4E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 2.4E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 PRINTS PR00986 Valyl-tRNA synthetase signature 238 255 2.4E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 PRINTS PR00986 Valyl-tRNA synthetase signature 471 492 2.4E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 PRINTS PR00986 Valyl-tRNA synthetase signature 371 384 2.4E-38 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Gene3D G3DSA:3.90.740.10 243 307 7.0E-8 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 882 946 2.9E-17 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 929 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 947 15.854 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 627 1.3E-200 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3494 57a74652b62754db526b4cd03732c495 949 Gene3D G3DSA:3.40.50.620 3 209 3.9E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Gene3D G3DSA:3.30.2130.30 7 260 1.7E-131 T 13-10-2018 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 SUPERFAMILY SSF53335 409 717 1.61E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Pfam PF01170 Putative RNA methylase family UPF0020 164 378 4.5E-42 T 13-10-2018 IPR000241 Putative RNA methylase domain Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 PIRSF PIRSF037618 1 718 4.6E-283 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 SUPERFAMILY SSF53335 147 379 8.71E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 201 212 - T 13-10-2018 IPR000241 Putative RNA methylase domain Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Gene3D G3DSA:3.30.750.80 405 499 2.2E-33 T 13-10-2018 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Pfam PF02926 THUMP domain 44 155 2.5E-12 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 SMART SM00981 58 156 1.7E-18 T 13-10-2018 IPR004114 THUMP domain GO:0003723 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 310 316 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Gene3D G3DSA:3.40.50.150 500 717 4.8E-68 T 13-10-2018 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 6 718 32.399 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 515 664 1.1E-17 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Thivi_3402 60039ec2d97ba1adc35c7f796b73c852 720 Gene3D G3DSA:3.40.50.150 171 376 1.7E-131 T 13-10-2018 Thivi_1839 3e907ca8ac848164462a12204c83c293 130 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 7.2E-50 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Thivi_1839 3e907ca8ac848164462a12204c83c293 130 Pfam PF01597 Glycine cleavage H-protein 8 128 2.7E-47 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Thivi_1839 3e907ca8ac848164462a12204c83c293 130 Gene3D G3DSA:2.40.50.100 2 129 1.9E-50 T 13-10-2018 Thivi_1839 3e907ca8ac848164462a12204c83c293 130 SUPERFAMILY SSF51230 3 128 3.8E-44 T 13-10-2018 IPR011053 Single hybrid motif Thivi_1839 3e907ca8ac848164462a12204c83c293 130 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 39.565 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 SMART SM00493 2 126 2.5E-13 T 13-10-2018 IPR006171 TOPRIM domain Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Pfam PF13342 C-terminal repeat of topoisomerase 669 727 4.1E-22 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 SMART SM00437 262 554 3.6E-76 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Gene3D G3DSA:1.10.290.10 271 399 1.2E-141 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 SUPERFAMILY SSF56712 3 602 9.03E-160 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 SMART SM00436 126 216 1.2E-27 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Gene3D G3DSA:3.40.50.140 2 153 9.6E-50 T 13-10-2018 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Pfam PF01751 Toprim domain 4 134 8.8E-11 T 13-10-2018 IPR006171 TOPRIM domain Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 2.7E-23 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 2.7E-23 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 2.7E-23 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 2.7E-23 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 385 401 2.7E-23 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Gene3D G3DSA:1.10.460.10 160 598 1.2E-141 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 719 3.8E-182 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Pfam PF01131 DNA topoisomerase 154 587 1.6E-112 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Thivi_3683 a975d1f3cd2eaed3b9764a5e9dff59ae 860 Gene3D G3DSA:2.70.20.10 210 485 1.2E-141 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF55073 738 895 5.41E-53 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF55785 343 472 7.57E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF55785 73 196 1.92E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00086 158 200 150.0 T 13-10-2018 IPR001610 PAC motif Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00086 680 722 6.1E-7 T 13-10-2018 IPR001610 PAC motif Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00086 559 600 0.0052 T 13-10-2018 IPR001610 PAC motif Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00086 432 474 1.2E-5 T 13-10-2018 IPR001610 PAC motif Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.30.450.20 347 472 9.7E-27 T 13-10-2018 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 729 891 3.4E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.30.450.20 605 731 9.4E-39 T 13-10-2018 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Pfam PF00563 EAL domain 911 1145 1.6E-71 T 13-10-2018 IPR001633 EAL domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF55785 616 719 7.89E-31 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.30.450.20 74 212 5.0E-8 T 13-10-2018 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.30.450.20 478 596 3.1E-16 T 13-10-2018 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Pfam PF00990 Diguanylate cyclase, GGDEF domain 733 889 5.3E-55 T 13-10-2018 IPR000160 GGDEF domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.20.20.450 908 1155 9.8E-102 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF141868 909 1155 5.89E-88 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00091 86 152 0.002 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00091 356 424 1.6E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00091 608 674 4.8E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00267 722 894 1.6E-75 T 13-10-2018 IPR000160 GGDEF domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Pfam PF13426 PAS domain 619 720 1.7E-18 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Pfam PF08447 PAS fold 510 594 1.9E-6 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Pfam PF08447 PAS fold 380 467 3.8E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 611 729 4.6E-22 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 481 2.2E-15 T 13-10-2018 IPR000014 PAS domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SMART SM00052 904 1150 1.5E-125 T 13-10-2018 IPR001633 EAL domain Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 SUPERFAMILY SSF55785 471 598 1.51E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2987 5bb4d599ea86e1303acf3b34e5429365 1156 Gene3D G3DSA:3.30.70.270 732 907 1.1E-65 T 13-10-2018 Thivi_4267 e781def5bc956e6d6f39f933269bf847 765 SUPERFAMILY SSF82866 162 370 9.16E-21 T 13-10-2018 Thivi_4267 e781def5bc956e6d6f39f933269bf847 765 Gene3D G3DSA:1.20.1640.10 584 761 5.3E-20 T 13-10-2018 Thivi_4267 e781def5bc956e6d6f39f933269bf847 765 SUPERFAMILY SSF82866 538 747 3.92E-33 T 13-10-2018 Thivi_4267 e781def5bc956e6d6f39f933269bf847 765 Pfam PF03176 MMPL family 426 758 2.8E-21 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Thivi_4267 e781def5bc956e6d6f39f933269bf847 765 Pfam PF03176 MMPL family 112 381 2.4E-9 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Thivi_4317 38924180e16f5d313775417f369e8969 87 Pfam PF00886 Ribosomal protein S16 8 68 9.3E-24 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4317 38924180e16f5d313775417f369e8969 87 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 5.8E-29 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4317 38924180e16f5d313775417f369e8969 87 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.301 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4317 38924180e16f5d313775417f369e8969 87 SUPERFAMILY SSF54565 1 78 1.31E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4317 38924180e16f5d313775417f369e8969 87 Gene3D G3DSA:3.30.1320.10 1 85 4.1E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1159 964c120980bd6f0d39fd1e12ef543957 141 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 137 1.4E-53 T 13-10-2018 IPR014172 TonB-system energizer ExbB type-2 GO:0016020|GO:0055085 Thivi_1159 964c120980bd6f0d39fd1e12ef543957 141 Pfam PF01618 MotA/TolQ/ExbB proton channel family 52 136 3.1E-27 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 SUPERFAMILY SSF48256 5 428 4.32E-147 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 Pfam PF00285 Citrate synthase, C-terminal domain 45 411 1.6E-123 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PIRSF PIRSF001369 36 429 5.2E-136 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 Gene3D G3DSA:1.10.580.10 56 411 1.3E-126 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 359 375 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 240 268 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 296 316 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 164 177 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 218 233 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 PRINTS PR00143 Citrate synthase signature 379 393 3.3E-49 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 Gene3D G3DSA:2.20.28.60 1 49 1.2E-17 T 13-10-2018 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 12 417 2.4E-155 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Thivi_0521 5e7383767c6432efbfa0870aab2b580c 429 Gene3D G3DSA:1.10.230.10 267 376 1.3E-126 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_1716 bbcfb416faea03de7b26b92d073abea0 213 SUPERFAMILY SSF69721 101 207 2.49E-25 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_1716 bbcfb416faea03de7b26b92d073abea0 213 Pfam PF04358 DsrC like protein 107 210 3.0E-31 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1716 bbcfb416faea03de7b26b92d073abea0 213 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 107 207 2.5E-24 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1716 bbcfb416faea03de7b26b92d073abea0 213 Gene3D G3DSA:1.10.10.370 142 211 1.3E-17 T 13-10-2018 Thivi_1716 bbcfb416faea03de7b26b92d073abea0 213 Gene3D G3DSA:3.30.1420.10 102 140 1.1E-10 T 13-10-2018 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 SUPERFAMILY SSF52540 15 403 1.17E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Gene3D G3DSA:1.10.10.160 100 229 4.0E-112 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Gene3D G3DSA:3.40.50.10930 19 357 4.0E-112 T 13-10-2018 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 PIRSF PIRSF000980 15 1207 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 16 1163 0.0 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Gene3D G3DSA:1.10.486.10 511 721 1.4E-182 T 13-10-2018 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 16 860 7.6E-261 T 13-10-2018 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 15 1203 19.734 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 Gene3D G3DSA:3.40.50.300 391 861 1.4E-182 T 13-10-2018 Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 SUPERFAMILY SSF52540 418 864 2.55E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2029 633c3506303a4b23f4a69b04caf1d8e4 1208 SUPERFAMILY SSF52980 895 1199 3.81E-45 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 787 1.2E-234 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Pfam PF07503 HypF finger 107 140 4.5E-17 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Pfam PF07503 HypF finger 157 189 7.4E-17 T 13-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Pfam PF00708 Acylphosphatase 6 89 1.6E-18 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Pfam PF01300 Telomere recombination 214 403 1.0E-47 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 SUPERFAMILY SSF54975 5 90 1.92E-20 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 PIRSF PIRSF006256 1 797 7.7E-293 T 13-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Gene3D G3DSA:3.30.420.360 402 787 1.5E-128 T 13-10-2018 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Gene3D G3DSA:3.30.420.350 508 775 1.5E-128 T 13-10-2018 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Gene3D G3DSA:3.30.110.120 257 390 1.6E-143 T 13-10-2018 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 SUPERFAMILY SSF55821 175 416 4.58E-47 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_3071 31ad96fc9d0670473171e0046681f4fa 799 Gene3D G3DSA:3.90.870.50 6 381 1.6E-143 T 13-10-2018 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 TIGRFAM TIGR02000 NifU_proper: Fe-S cluster assembly protein NifU 1 285 7.6E-144 T 13-10-2018 IPR010238 NIF system FeS cluster assembly, NifU GO:0005506|GO:0016226|GO:0051536 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 226 286 6.0E-22 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Pfam PF01592 NifU-like N terminal domain 3 124 1.6E-48 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Gene3D G3DSA:1.10.10.1100 136 190 5.5E-7 T 13-10-2018 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Pfam PF01106 NifU-like domain 219 282 2.7E-21 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 SUPERFAMILY SSF117916 210 285 6.28E-20 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Gene3D G3DSA:3.30.300.130 212 288 5.5E-19 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Gene3D G3DSA:3.90.1010.10 1 135 6.8E-53 T 13-10-2018 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 Pfam PF04324 BFD-like [2Fe-2S] binding domain 135 184 7.9E-16 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 SUPERFAMILY SSF82649 2 131 7.59E-41 T 13-10-2018 Thivi_0486 f01be21a1977962a997cb365b0923e8e 290 PIRSF PIRSF000375 1 286 9.5E-129 T 13-10-2018 IPR016217 Nitrogen fixation, NifU Thivi_3595 841211e6e0969df55f26781e4746e236 273 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 265 6.6E-141 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Thivi_3595 841211e6e0969df55f26781e4746e236 273 SUPERFAMILY SSF56276 47 178 1.06E-23 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Thivi_3595 841211e6e0969df55f26781e4746e236 273 Pfam PF02675 S-adenosylmethionine decarboxylase 37 173 6.6E-33 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Thivi_3595 841211e6e0969df55f26781e4746e236 273 PIRSF PIRSF001356 3 267 1.2E-139 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Thivi_3595 841211e6e0969df55f26781e4746e236 273 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 273 154.726 T 13-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Thivi_3595 841211e6e0969df55f26781e4746e236 273 Gene3D G3DSA:3.60.90.10 103 188 3.5E-7 T 13-10-2018 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 720 753 41.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 568 601 1.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 682 715 0.091 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 530 563 1.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 758 791 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 644 677 2.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00028 606 639 0.25 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00382 46 292 3.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SUPERFAMILY SSF48452 529 711 4.14E-29 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Gene3D G3DSA:1.25.40.10 640 798 4.6E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Pfam PF13191 AAA ATPase domain 29 173 2.6E-9 T 13-10-2018 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Pfam PF13181 Tetratricopeptide repeat 644 675 0.091 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Pfam PF13181 Tetratricopeptide repeat 530 561 2.8E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SUPERFAMILY SSF48452 459 561 4.01E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Gene3D G3DSA:1.10.10.10 298 373 1.0E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SUPERFAMILY SSF46785 301 383 8.37E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SUPERFAMILY SSF48452 680 787 4.22E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SMART SM00418 291 369 0.0071 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Gene3D G3DSA:3.40.50.300 25 204 5.6E-13 T 13-10-2018 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Pfam PF13412 Winged helix-turn-helix DNA-binding 299 344 5.9E-5 T 13-10-2018 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Gene3D G3DSA:1.25.40.10 455 639 2.5E-26 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 Pfam PF13424 Tetratricopeptide repeat 567 627 8.3E-9 T 13-10-2018 Thivi_1650 162acf0e1f355e3b05189c34636c5399 928 SUPERFAMILY SSF52540 32 271 1.03E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF141868 828 1073 4.32E-94 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF13426 PAS domain 536 638 1.9E-14 T 13-10-2018 IPR000014 PAS domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.30.450.20 526 647 5.6E-37 T 13-10-2018 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 528 646 7.9E-21 T 13-10-2018 IPR000014 PAS domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 396 1.7E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.30.70.270 648 824 1.3E-61 T 13-10-2018 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF00563 EAL domain 828 1063 3.3E-75 T 13-10-2018 IPR001633 EAL domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.40.50.2300 128 269 1.2E-19 T 13-10-2018 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00052 822 1068 6.0E-127 T 13-10-2018 IPR001633 EAL domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.30.450.20 270 389 4.4E-18 T 13-10-2018 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.30.450.40 425 525 1.3E-6 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 646 810 3.4E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF55785 294 392 1.01E-11 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00091 274 344 2.4E-4 T 13-10-2018 IPR000014 PAS domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00091 525 591 1.9E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.40.50.2300 1 127 3.2E-28 T 13-10-2018 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF00990 Diguanylate cyclase, GGDEF domain 651 808 2.4E-51 T 13-10-2018 IPR000160 GGDEF domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF55785 530 637 4.01E-30 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Gene3D G3DSA:3.20.20.450 825 1074 6.0E-108 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00267 639 812 1.6E-72 T 13-10-2018 IPR000160 GGDEF domain Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF52172 1 127 1.99E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF55073 655 814 3.45E-50 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00086 597 639 2.4E-8 T 13-10-2018 IPR001610 PAC motif Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00086 349 391 210.0 T 13-10-2018 IPR001610 PAC motif Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00448 133 253 3.0E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SMART SM00448 1 115 4.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF08447 PAS fold 301 371 4.7E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF00072 Response regulator receiver domain 3 114 6.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 Pfam PF00072 Response regulator receiver domain 160 243 6.2E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2338 181f573d5fbc24a6a2572c936b563bfa 1075 SUPERFAMILY SSF52172 131 274 1.57E-20 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2532 04742e042f4057259f46df7fe2cf4c17 131 SUPERFAMILY SSF141734 4 113 1.12E-46 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Thivi_2532 04742e042f4057259f46df7fe2cf4c17 131 Gene3D G3DSA:3.10.20.400 4 96 6.8E-36 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Thivi_2532 04742e042f4057259f46df7fe2cf4c17 131 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 1.8E-33 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Thivi_2532 04742e042f4057259f46df7fe2cf4c17 131 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 30.915 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Thivi_2532 04742e042f4057259f46df7fe2cf4c17 131 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 108 1.0E-19 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.20.20.450 920 1170 5.0E-93 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00086 695 735 0.98 T 13-10-2018 IPR001610 PAC motif Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00086 396 438 0.16 T 13-10-2018 IPR001610 PAC motif Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 319 442 5.4E-19 T 13-10-2018 IPR000014 PAS domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 614 741 7.2E-19 T 13-10-2018 IPR000014 PAS domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF00990 Diguanylate cyclase, GGDEF domain 746 902 5.8E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.30.450.20 90 241 3.3E-32 T 13-10-2018 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SUPERFAMILY SSF55073 751 909 2.82E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF00563 EAL domain 923 1158 1.8E-66 T 13-10-2018 IPR001633 EAL domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF00989 PAS fold 325 435 1.8E-14 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF00989 PAS fold 619 732 1.7E-16 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.30.450.20 309 435 4.8E-24 T 13-10-2018 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SUPERFAMILY SSF141868 923 1170 2.75E-83 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.30.450.20 615 743 2.2E-25 T 13-10-2018 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00267 735 907 2.5E-59 T 13-10-2018 IPR000160 GGDEF domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 743 904 7.7E-40 T 13-10-2018 IPR000160 GGDEF domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF13185 GAF domain 460 603 1.9E-17 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SUPERFAMILY SSF55785 308 436 2.65E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM01049 74 171 0.0021 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.30.450.40 460 614 7.1E-28 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Pfam PF08269 Cache domain 114 223 6.2E-22 T 13-10-2018 IPR004010 Double Cache domain 2 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00052 917 1163 5.5E-102 T 13-10-2018 IPR001633 EAL domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00065 460 612 2.7E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SUPERFAMILY SSF55785 601 733 7.57E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 Gene3D G3DSA:3.30.70.270 744 919 7.3E-57 T 13-10-2018 Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00091 616 682 5.0E-11 T 13-10-2018 IPR000014 PAS domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SMART SM00091 323 389 2.3E-12 T 13-10-2018 IPR000014 PAS domain Thivi_2840 52b4b64b0aef2c230a9bc8303009dc73 1179 SUPERFAMILY SSF55781 430 603 1.5E-28 T 13-10-2018 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 PIRSF PIRSF000124 9 421 1.1E-74 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 SUPERFAMILY SSF52413 318 421 6.41E-21 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 SMART SM00984 325 422 3.2E-19 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 Gene3D G3DSA:3.40.50.720 2 213 2.1E-61 T 13-10-2018 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 10 417 5.0E-118 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 PIRSF PIRSF500136 1 422 1.1E-139 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 420 6.4E-17 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 SUPERFAMILY SSF51735 9 207 4.05E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4283 349dec5ebb0407292c210630cda85d58 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 215 302 3.2E-28 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 SUPERFAMILY SSF48179 215 307 1.63E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 Gene3D G3DSA:3.40.50.720 214 422 1.6E-57 T 13-10-2018 Thivi_4283 349dec5ebb0407292c210630cda85d58 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 10 197 5.9E-53 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 SMART SM00382 562 748 2.4E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 Pfam PF00005 ABC transporter 553 702 2.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 Pfam PF00664 ABC transporter transmembrane region 217 486 1.1E-46 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 Gene3D G3DSA:1.20.1560.10 186 525 2.0E-88 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 SUPERFAMILY SSF52540 528 773 2.5E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 Gene3D G3DSA:3.40.50.300 529 781 1.8E-93 T 13-10-2018 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 SUPERFAMILY SSF90123 201 525 1.44E-76 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_0046 9a29cdc41d11f004ab07cc1dfe21f5f2 782 ProSitePatterns PS00211 ABC transporters family signature. 674 688 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0313 72d95fe980839d333b97b9f4a2d08f5d 108 SUPERFAMILY SSF103481 5 106 1.7E-18 T 13-10-2018 Thivi_0313 72d95fe980839d333b97b9f4a2d08f5d 108 Pfam PF00893 Small Multidrug Resistance protein 3 94 9.4E-29 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Thivi_0313 72d95fe980839d333b97b9f4a2d08f5d 108 Gene3D G3DSA:1.10.3730.20 1 108 1.5E-36 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 9 548 3.7E-261 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Gene3D G3DSA:3.30.413.10 416 557 6.2E-34 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 163 319 2.1E-47 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Gene3D G3DSA:3.30.413.10 187 326 1.7E-46 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Gene3D G3DSA:3.30.413.10 141 186 1.2E-9 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 SUPERFAMILY SSF55124 335 411 1.44E-20 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 467 483 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 PRINTS PR00397 Sirohaem Fe-binding site signature 419 437 2.4E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 PRINTS PR00397 Sirohaem Fe-binding site signature 467 485 2.4E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 SUPERFAMILY SSF55124 4 137 1.6E-29 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Gene3D G3DSA:3.90.480.10 327 412 1.3E-28 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Gene3D G3DSA:3.90.480.20 1 140 1.7E-17 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 423 547 0.12 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 SUPERFAMILY SSF56014 138 333 2.62E-58 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 560 57.732 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 SUPERFAMILY SSF56014 422 549 3.93E-32 T 13-10-2018 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 69 128 1.3E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1406 3e990bd24460f7588000cde2a913d4ab 560 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 341 406 1.3E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 Pfam PF00733 Asparagine synthase 244 622 1.2E-97 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 Pfam PF13537 Glutamine amidotransferase domain 48 167 2.3E-49 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 1.4E-147 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 SUPERFAMILY SSF52402 236 621 8.63E-84 T 13-10-2018 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 SUPERFAMILY SSF56235 1 226 8.06E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 625 0.0 T 13-10-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 PIRSF PIRSF001589 1 628 2.3E-172 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_4250 335ec2e377fac313083156f2a22a48e4 647 Gene3D G3DSA:3.60.20.10 2 186 9.0E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2762 ed45b0b2623c027475d609ab892aa451 282 SUPERFAMILY SSF109604 11 279 1.28E-53 T 13-10-2018 Thivi_2762 ed45b0b2623c027475d609ab892aa451 282 Gene3D G3DSA:1.10.3210.10 2 273 1.3E-56 T 13-10-2018 Thivi_2762 ed45b0b2623c027475d609ab892aa451 282 Pfam PF08668 HDOD domain 21 213 1.4E-43 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SUPERFAMILY SSF56091 5 318 1.98E-114 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:1.10.150.20 434 506 1.1E-32 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SUPERFAMILY SSF47781 406 571 3.34E-53 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF12826 Helix-hairpin-helix motif 512 572 1.4E-12 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF12826 Helix-hairpin-helix motif 585 651 2.3E-10 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00292 673 749 6.2E-13 T 13-10-2018 IPR001357 BRCT domain Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 324 399 1.6E-34 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SUPERFAMILY SSF47781 569 661 2.7E-15 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 320 2.4E-122 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 675 745 1.1E-11 T 13-10-2018 IPR001357 BRCT domain Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:2.20.70.80 393 432 1.4E-17 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SUPERFAMILY SSF50249 320 401 1.88E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00532 6 450 7.6E-248 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:1.10.150.20 507 577 2.6E-14 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00278 514 533 150.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00278 482 501 0.14 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00278 549 568 1600.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00278 622 641 760.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SMART SM00278 448 467 8.2 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:3.40.50.10190 672 749 4.3E-23 T 13-10-2018 IPR036420 BRCT domain superfamily Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 409 436 2.2E-11 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 SUPERFAMILY SSF52113 672 746 9.91E-18 T 13-10-2018 IPR036420 BRCT domain superfamily Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:3.30.470.90 71 319 1.1E-93 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 573 7.3E-214 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:2.40.50.140 320 392 5.2E-32 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Hamap MF_01588 DNA ligase [ligA]. 5 746 52.629 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 333 348 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Pfam PF14520 Helix-hairpin-helix domain 448 503 4.0E-6 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:1.10.150.20 579 664 4.7E-16 T 13-10-2018 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 PIRSF PIRSF001604 569 749 7.1E-32 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 PIRSF PIRSF001604 1 581 1.8E-209 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Thivi_4489 55870773d644cdb4e73d23dc77556294 749 Gene3D G3DSA:1.10.287.610 5 70 1.5E-30 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 SUPERFAMILY SSF82693 43 132 4.19E-18 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 SUPERFAMILY SSF82866 299 493 5.89E-33 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 SUPERFAMILY SSF82714 181 259 1.07E-5 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.7E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.7E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.7E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.7E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.7E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.70.1430 567 673 7.4E-231 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.2090.10 174 264 7.4E-231 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 SUPERFAMILY SSF82866 809 1030 3.27E-45 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.70.1440 674 870 7.4E-231 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.70.1430 42 818 7.4E-231 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:1.20.1640.10 12 509 7.4E-231 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 SUPERFAMILY SSF82714 735 807 1.31E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.70.1320 135 333 7.4E-231 T 13-10-2018 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:3.30.2090.10 723 810 7.4E-231 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 6.2E-139 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0041 9fc2e7131345df4a159abfde88803645 1068 Gene3D G3DSA:1.20.1640.10 510 1026 7.4E-231 T 13-10-2018 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 5.7E-134 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.755 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 SUPERFAMILY SSF51726 2 351 3.84E-126 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.1E-143 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 Gene3D G3DSA:3.20.20.210 1 354 1.1E-161 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_2894 042b13d9ea10d67f4208d729408d2d65 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:3.40.50.620 241 375 2.6E-5 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Pfam PF13493 Domain of unknown function (DUF4118) 405 511 1.3E-28 T 13-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SUPERFAMILY SSF55781 512 663 4.42E-9 T 13-10-2018 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:3.30.565.10 739 890 1.4E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Pfam PF13492 GAF domain 589 648 1.7E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SMART SM00388 667 734 5.5E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SUPERFAMILY SSF55874 723 891 5.5E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 2.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 830 2.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 2.9E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SMART SM00387 778 889 1.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SUPERFAMILY SSF52402 254 368 3.1E-7 T 13-10-2018 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:3.30.450.40 514 658 3.7E-37 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 887 1.2E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:1.10.287.130 659 736 7.0E-19 T 13-10-2018 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 SUPERFAMILY SSF47384 653 735 6.08E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 24 232 8.4E-98 T 13-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:1.20.120.620 401 505 4.6E-31 T 13-10-2018 IPR038318 KdpD, transmembrane domain superfamily Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 734 1.0E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0076 9c93365180124b06ec84de7dae4f9a74 907 Gene3D G3DSA:3.40.50.300 21 231 1.3E-100 T 13-10-2018 Thivi_4275 81776469668f975e71fef19f7fc056c1 233 Pfam PF13444 Acetyltransferase (GNAT) domain 20 122 4.9E-5 T 13-10-2018 Thivi_4275 81776469668f975e71fef19f7fc056c1 233 SUPERFAMILY SSF55729 5 173 2.34E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4275 81776469668f975e71fef19f7fc056c1 233 Gene3D G3DSA:3.40.630.30 4 189 4.1E-29 T 13-10-2018 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 237 318 9.4E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 551 683 1.3E-25 T 13-10-2018 IPR020992 Tail specific protease, C-terminal Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 198 564 4.7E-86 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 Gene3D G3DSA:2.30.42.10 233 320 1.1E-12 T 13-10-2018 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 Pfam PF03572 Peptidase family S41 361 543 1.6E-46 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 SUPERFAMILY SSF52096 179 552 1.66E-62 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 Gene3D G3DSA:3.90.226.10 327 566 4.0E-56 T 13-10-2018 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 SMART SM00228 244 322 1.7E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 SMART SM00245 327 545 5.1E-53 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Thivi_3367 fefa58f67ae8a64284d561fc37b0550a 699 SUPERFAMILY SSF50156 236 318 9.1E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_2061 a3eca6d5dfe685eac5349801b2c2c6a2 551 Pfam PF13584 Oxygen tolerance 100 342 1.2E-37 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 Gene3D G3DSA:3.40.50.700 46 226 1.0E-72 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PIRSF PIRSF000310 5 357 6.5E-144 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 1.2E-123 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 Gene3D G3DSA:4.10.480.10 229 339 2.4E-47 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 308 2.0E-32 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 41 7.1E-6 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 4 352 3.0E-168 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 SUPERFAMILY SSF56770 47 310 8.5E-90 T 13-10-2018 Thivi_3760 d172f2295247752fdee42cc52d7f5098 365 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 3.2E-30 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 3 322 33.869 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Gene3D G3DSA:3.40.1390.10 2 95 3.6E-9 T 13-10-2018 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 264 292 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 110 140 0.2 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Gene3D G3DSA:2.160.10.10 97 304 3.4E-63 T 13-10-2018 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 19 325 9.6E-100 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 220 254 0.0028 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 177 2.5E-10 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 SUPERFAMILY SSF51161 30 311 1.92E-72 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2212 752fefc6d19a7b4210ca4dfa8d98f7eb 361 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 86 9.6E-11 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 SUPERFAMILY SSF55021 57 134 2.27E-23 T 13-10-2018 Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 Pfam PF08753 NikR C terminal nickel binding domain 59 134 1.0E-28 T 13-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 Hamap MF_00476 Nickel-responsive regulator [nikR]. 7 137 27.749 T 13-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 Gene3D G3DSA:3.30.70.1150 49 140 4.7E-33 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 Gene3D G3DSA:1.10.1220.10 14 48 2.8E-15 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 46 6.0E-8 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Thivi_1174 34abfba40ad28b693f5ab38f2e94154c 140 SUPERFAMILY SSF47598 6 52 2.08E-12 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_1493 19433b5cef174424ec47bd48da789262 1290 SUPERFAMILY SSF53271 5 54 1.11E-5 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_1493 19433b5cef174424ec47bd48da789262 1290 Pfam PF01048 Phosphorylase superfamily 1032 1271 1.2E-10 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Thivi_1493 19433b5cef174424ec47bd48da789262 1290 SUPERFAMILY SSF53167 1026 1274 2.57E-15 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Thivi_1493 19433b5cef174424ec47bd48da789262 1290 Gene3D G3DSA:3.40.50.1580 1015 1285 4.0E-28 T 13-10-2018 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 Gene3D G3DSA:2.70.210.12 1 158 4.1E-62 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 PIRSF PIRSF002401 1 359 5.2E-133 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 SUPERFAMILY SSF52540 152 338 1.02E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 SUPERFAMILY SSF82051 2 157 1.44E-57 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 Pfam PF01018 GTP1/OBG 4 156 6.4E-59 T 13-10-2018 IPR006169 GTP1/OBG domain Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 6.1E-141 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.4E-32 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.4E-32 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.4E-32 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.4E-32 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.357 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 Gene3D G3DSA:3.40.50.300 159 339 1.3E-49 T 13-10-2018 Thivi_2543 46be0ff24bb6f2cb33b43f6b54d39d8c 373 Pfam PF01926 50S ribosome-binding GTPase 161 285 1.6E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 SUPERFAMILY SSF75445 126 197 3.01E-23 T 13-10-2018 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 216 32.733 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 48 212 3.2E-57 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 SUPERFAMILY SSF100950 1 145 2.79E-42 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 Gene3D G3DSA:3.40.50.1360 7 212 1.1E-73 T 13-10-2018 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 213 6.2E-64 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Thivi_4240 a47dc59f9add79c1e69e4692b498f4c2 223 Gene3D G3DSA:3.30.70.260 124 195 1.1E-73 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 816 2.6E-182 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 SUPERFAMILY SSF55008 13 78 1.96E-17 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 ProSitePatterns PS01047 Heavy-metal-associated domain. 85 114 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Gene3D G3DSA:3.40.50.1000 489 758 1.7E-92 T 13-10-2018 IPR023214 HAD superfamily Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Pfam PF00403 Heavy-metal-associated domain 19 75 8.3E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Pfam PF00403 Heavy-metal-associated domain 85 143 7.8E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Gene3D G3DSA:3.30.70.100 79 145 1.4E-21 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 SUPERFAMILY SSF81665 273 791 1.96E-14 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Pfam PF00122 E1-E2 ATPase 307 486 2.7E-54 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 SUPERFAMILY SSF56784 507 813 1.81E-57 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 720 1.5E-44 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 785 3.2E-95 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 75 3.6E-10 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 82 143 1.1E-14 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 815 1.2E-189 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 356 370 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 706 725 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 729 741 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 663 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 642 7.9E-28 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 683 700 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 224 243 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 276 295 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 296 314 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 124 144 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00943 Copper-transporting ATPase signature 429 443 6.4E-11 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00942 Copper-transporting ATPase 1 signature 40 63 2.5E-9 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00942 Copper-transporting ATPase 1 signature 222 247 2.5E-9 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 PRINTS PR00942 Copper-transporting ATPase 1 signature 14 39 2.5E-9 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 SUPERFAMILY SSF55008 81 145 1.31E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Gene3D G3DSA:2.70.150.20 294 410 6.8E-42 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 SUPERFAMILY SSF81653 308 406 2.09E-28 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Gene3D G3DSA:3.40.1110.10 519 638 1.7E-92 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 Gene3D G3DSA:3.30.70.100 12 78 6.9E-18 T 13-10-2018 Thivi_2821 2db0ee809f41025baf1c5ed39559fcfd 830 ProSitePatterns PS01047 Heavy-metal-associated domain. 19 48 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Gene3D G3DSA:3.30.70.270 276 449 6.4E-38 T 13-10-2018 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Pfam PF00990 Diguanylate cyclase, GGDEF domain 283 437 1.1E-25 T 13-10-2018 IPR000160 GGDEF domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Pfam PF13188 PAS domain 158 215 1.0E-9 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Pfam PF00563 EAL domain 460 695 3.0E-71 T 13-10-2018 IPR001633 EAL domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SUPERFAMILY SSF52172 725 852 2.7E-26 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Gene3D G3DSA:3.20.20.450 455 710 7.6E-99 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SUPERFAMILY SSF55785 17 120 9.77E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SMART SM00052 454 700 6.3E-109 T 13-10-2018 IPR001633 EAL domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SMART SM00448 723 835 4.8E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SUPERFAMILY SSF141868 460 706 1.23E-87 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SMART SM00091 28 97 0.0036 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SMART SM00091 158 224 9.1E-4 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SUPERFAMILY SSF55785 143 271 6.28E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Pfam PF00072 Response regulator receiver domain 725 835 9.3E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SUPERFAMILY SSF55073 287 446 2.59E-32 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 439 1.8E-23 T 13-10-2018 IPR000160 GGDEF domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Pfam PF13426 PAS domain 40 143 1.5E-8 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 SMART SM00267 271 444 4.5E-28 T 13-10-2018 IPR000160 GGDEF domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Gene3D G3DSA:3.30.450.20 147 272 3.1E-21 T 13-10-2018 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Gene3D G3DSA:3.40.50.2300 719 853 1.3E-25 T 13-10-2018 Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 153 6.1E-13 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 268 1.9E-9 T 13-10-2018 IPR000014 PAS domain Thivi_0201 627021efd7f2ade70dd31d77f12617dd 869 Gene3D G3DSA:3.30.450.20 26 146 1.2E-23 T 13-10-2018 Thivi_0730 5b1750e01f82ac6ff46ab8730fb9cbeb 141 SMART SM00363 10 71 3.5E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_0730 5b1750e01f82ac6ff46ab8730fb9cbeb 141 Pfam PF01479 S4 domain 11 55 3.1E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_0730 5b1750e01f82ac6ff46ab8730fb9cbeb 141 SUPERFAMILY SSF55174 9 101 4.06E-26 T 13-10-2018 Thivi_0730 5b1750e01f82ac6ff46ab8730fb9cbeb 141 Gene3D G3DSA:3.10.290.10 3 106 2.0E-34 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_0730 5b1750e01f82ac6ff46ab8730fb9cbeb 141 PIRSF PIRSF016821 7 134 2.3E-38 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 Gene3D G3DSA:3.40.50.150 184 343 1.5E-71 T 13-10-2018 Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 Pfam PF00891 O-methyltransferase 126 352 2.0E-39 T 13-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 SUPERFAMILY SSF53335 123 358 6.39E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 Gene3D G3DSA:1.10.10.2650 47 333 1.5E-71 T 13-10-2018 Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 Pfam PF16864 Dimerisation domain 41 113 7.3E-16 T 13-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 PIRSF PIRSF005739 31 362 1.2E-20 T 13-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 Thivi_2013 e983a60ed61a927c51fcaeead052b7af 371 SUPERFAMILY SSF46785 39 120 2.59E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 2.2E-149 T 13-10-2018 IPR002155 Thiolase GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 Gene3D G3DSA:3.40.47.10 127 390 3.2E-157 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 SUPERFAMILY SSF53901 5 271 7.68E-90 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 Gene3D G3DSA:3.40.47.10 7 277 3.2E-157 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 1.2E-52 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 SUPERFAMILY SSF53901 272 393 1.94E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 Pfam PF00108 Thiolase, N-terminal domain 5 264 6.5E-110 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Thivi_3439 15fcdfe9768d5347528e34f51b181282 394 PIRSF PIRSF000429 1 394 2.5E-134 T 13-10-2018 IPR002155 Thiolase GO:0016747 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 SUPERFAMILY SSF52374 12 303 1.64E-79 T 13-10-2018 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 Gene3D G3DSA:3.40.50.620 87 232 1.9E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 Gene3D G3DSA:3.40.50.620 12 301 1.9E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 13 245 4.7E-38 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 12 307 41.863 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 12 272 2.9E-108 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 7.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 194 7.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 7.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 7.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_4002 5c579c142c9de3a8d0c97de24c5199c4 311 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 208 7.1E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 SUPERFAMILY SSF69287 1 72 2.75E-17 T 13-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 Pfam PF02814 UreE urease accessory protein, N-terminal domain 8 64 4.2E-20 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 Gene3D G3DSA:3.30.70.790 73 143 1.4E-29 T 13-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 140 24.047 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 Pfam PF05194 UreE urease accessory protein, C-terminal domain 74 153 1.9E-26 T 13-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 SMART SM00988 1 66 1.7E-18 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 Gene3D G3DSA:2.60.260.20 1 71 1.1E-23 T 13-10-2018 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 SUPERFAMILY SSF69737 72 139 8.89E-21 T 13-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Thivi_2082 6dff4bd90cfb7f4b27332493d1239e11 155 PIRSF PIRSF036402 1 154 2.8E-45 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.065 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 SMART SM01387 8 88 5.4E-51 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 Pfam PF00312 Ribosomal protein S15 8 88 3.1E-37 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-27 T 13-10-2018 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 SUPERFAMILY SSF47060 3 89 9.42E-36 T 13-10-2018 IPR009068 S15/NS1, RNA-binding Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.1E-38 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3171 d0e009ab2a3af1632b145e59ad2132d8 89 Gene3D G3DSA:1.10.287.10 1 89 1.2E-35 T 13-10-2018 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 2.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.5E-5 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 220 6.0E-65 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 221 36.361 T 13-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 189 2.2E-31 T 13-10-2018 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 Gene3D G3DSA:3.40.50.1000 7 213 1.4E-59 T 13-10-2018 IPR023214 HAD superfamily Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 124 190 1.9E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 185 8.8E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 Gene3D G3DSA:1.10.150.240 19 90 1.4E-59 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_3478 09d2b9e7f2395fd5f48a322883362d5e 224 SUPERFAMILY SSF56784 4 220 2.23E-57 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_3095 1d20a6eeed2be95d40e75f03e7b7286e 198 SUPERFAMILY SSF55846 17 191 4.45E-67 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_3095 1d20a6eeed2be95d40e75f03e7b7286e 198 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 39 181 7.0E-27 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_3095 1d20a6eeed2be95d40e75f03e7b7286e 198 SMART SM00644 29 180 3.2E-51 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_3095 1d20a6eeed2be95d40e75f03e7b7286e 198 Gene3D G3DSA:3.40.80.10 15 194 1.0E-58 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_1127 445ac7dd256231707fdaa9d475f22733 148 Pfam PF01724 Domain of unknown function DUF29 11 147 9.2E-46 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_1127 445ac7dd256231707fdaa9d475f22733 148 Gene3D G3DSA:1.20.1220.20 5 148 1.6E-30 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-36 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 6.2E-84 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.3E-13 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.3E-13 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.3E-13 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.5E-5 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.5E-5 T 13-10-2018 Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 Pfam PF00117 Glutamine amidotransferase class-I 4 190 7.0E-55 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 Gene3D G3DSA:3.40.50.880 1 192 1.6E-63 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_3590 00043e73f86a24951e8a6df16114f5cc 195 SUPERFAMILY SSF52317 1 191 6.38E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Gene3D G3DSA:3.40.50.300 131 309 5.5E-61 T 13-10-2018 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 SUPERFAMILY SSF52172 1 182 1.85E-41 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 SUPERFAMILY SSF52540 139 381 2.32E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 SMART SM00382 159 302 6.4E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Gene3D G3DSA:1.10.10.60 389 449 4.6E-12 T 13-10-2018 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 SUPERFAMILY SSF46689 354 448 8.06E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Gene3D G3DSA:1.10.8.60 310 388 2.1E-23 T 13-10-2018 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Gene3D G3DSA:3.40.50.2300 1 130 2.9E-32 T 13-10-2018 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 SMART SM00448 4 115 1.8E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Pfam PF00158 Sigma-54 interaction domain 139 305 8.4E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Pfam PF02954 Bacterial regulatory protein, Fis family 405 446 8.5E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3578 e293ddc5738c28a818915062518d2aa5 449 Pfam PF00072 Response regulator receiver domain 7 113 8.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2104 12fb285b0c07f4abaad541b30e4ef7ca 192 Gene3D G3DSA:3.40.50.850 2 192 6.4E-46 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Thivi_2104 12fb285b0c07f4abaad541b30e4ef7ca 192 SUPERFAMILY SSF52499 17 192 1.57E-41 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Thivi_2104 12fb285b0c07f4abaad541b30e4ef7ca 192 Pfam PF00857 Isochorismatase family 17 169 1.3E-24 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Gene3D G3DSA:3.50.30.10 388 513 8.7E-69 T 13-10-2018 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Gene3D G3DSA:3.30.1490.20 13 248 8.7E-91 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 SUPERFAMILY SSF51621 515 918 3.77E-112 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 SUPERFAMILY SSF52009 391 516 2.09E-34 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 525 917 2.3E-86 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 SUPERFAMILY SSF56059 4 382 1.53E-125 T 13-10-2018 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 454 465 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Pfam PF00391 PEP-utilising enzyme, mobile domain 427 507 3.9E-27 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 305 361 1.9E-9 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 295 1.5E-40 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Gene3D G3DSA:1.10.189.10 350 533 8.7E-69 T 13-10-2018 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 6 919 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 PIRSF PIRSF000853 4 922 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Gene3D G3DSA:3.30.470.20 249 346 3.9E-39 T 13-10-2018 Thivi_3053 a7f4eac9ff76a312d0d5e57b6025a45c 922 Gene3D G3DSA:1.20.80.30 114 201 8.7E-91 T 13-10-2018 Thivi_3264 384e0ac8c12d844b1636c35f65c4a519 151 SUPERFAMILY SSF46785 12 144 4.36E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3264 384e0ac8c12d844b1636c35f65c4a519 151 Gene3D G3DSA:3.30.1490.190 90 150 3.8E-17 T 13-10-2018 Thivi_3264 384e0ac8c12d844b1636c35f65c4a519 151 Gene3D G3DSA:1.10.10.10 1 89 8.0E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3264 384e0ac8c12d844b1636c35f65c4a519 151 Pfam PF01475 Ferric uptake regulator family 20 134 5.0E-15 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Thivi_4075 2d125ca776475a45d4ad20b8f4f5657a 217 Gene3D G3DSA:3.20.80.10 28 215 6.4E-40 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Thivi_4075 2d125ca776475a45d4ad20b8f4f5657a 217 SUPERFAMILY SSF55136 21 209 1.92E-50 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Thivi_4075 2d125ca776475a45d4ad20b8f4f5657a 217 Pfam PF04832 SOUL heme-binding protein 29 208 1.4E-44 T 13-10-2018 IPR006917 SOUL haem-binding protein Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 Pfam PF14524 Wzt C-terminal domain 300 436 7.3E-30 T 13-10-2018 IPR029439 Wzt, C-terminal Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 SMART SM00382 53 233 6.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 Pfam PF00005 ABC transporter 45 176 6.3E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 Gene3D G3DSA:3.40.50.300 30 292 4.4E-42 T 13-10-2018 Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 Gene3D G3DSA:2.70.50.60 293 436 6.7E-16 T 13-10-2018 Thivi_2678 72aecaded6f56f46c9b15d8c0b32cc19 455 SUPERFAMILY SSF52540 36 236 1.39E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1220 f1c7a465efe3425c62f9d73f1526e625 203 Pfam PF03975 CheD chemotactic sensory transduction 66 170 8.6E-34 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_1220 f1c7a465efe3425c62f9d73f1526e625 203 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 174 29.158 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_1220 f1c7a465efe3425c62f9d73f1526e625 203 Gene3D G3DSA:3.30.1330.200 21 181 3.9E-51 T 13-10-2018 IPR038592 CheD-like superfamily Thivi_1220 f1c7a465efe3425c62f9d73f1526e625 203 SUPERFAMILY SSF64438 24 177 6.68E-50 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_1064 377abe4f97a4137404382548c6522008 1336 Pfam PF01336 OB-fold nucleic acid binding domain 1148 1210 3.8E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Thivi_1064 377abe4f97a4137404382548c6522008 1336 SMART SM00481 6 73 4.5E-25 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thivi_1064 377abe4f97a4137404382548c6522008 1336 Gene3D G3DSA:2.170.16.10 752 907 1.2E-17 T 13-10-2018 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Gene3D G3DSA:1.10.10.1600 434 511 2.9E-31 T 13-10-2018 Thivi_1064 377abe4f97a4137404382548c6522008 1336 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 755 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_1064 377abe4f97a4137404382548c6522008 1336 SUPERFAMILY SSF51294 760 899 2.56E-11 T 13-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Gene3D G3DSA:2.40.50.140 1139 1230 4.7E-6 T 13-10-2018 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Pfam PF02811 PHP domain 7 171 1.6E-41 T 13-10-2018 IPR004013 PHP domain GO:0003824 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Pfam PF14579 Helix-hairpin-helix motif 951 1039 2.8E-27 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 308 730 2.5E-173 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_1064 377abe4f97a4137404382548c6522008 1336 SUPERFAMILY SSF89550 5 262 2.16E-18 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Thivi_1064 377abe4f97a4137404382548c6522008 1336 Gene3D G3DSA:3.20.20.140 1 268 1.3E-91 T 13-10-2018 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Gene3D G3DSA:4.10.320.10 277 320 2.0E-19 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 SUPERFAMILY SSF52777 337 576 1.11E-81 T 13-10-2018 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 SUPERFAMILY SSF51230 131 222 4.19E-21 T 13-10-2018 IPR011053 Single hybrid motif Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 SUPERFAMILY SSF51230 4 87 6.02E-20 T 13-10-2018 IPR011053 Single hybrid motif Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Gene3D G3DSA:3.30.559.10 332 576 2.7E-92 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 SUPERFAMILY SSF47005 270 316 4.84E-13 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 349 575 8.5E-76 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 107 576 3.6E-180 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 154 183 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Pfam PF00364 Biotin-requiring enzyme 6 77 1.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Pfam PF00364 Biotin-requiring enzyme 133 203 2.3E-20 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Pfam PF02817 e3 binding domain 276 311 3.0E-15 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Gene3D G3DSA:2.40.50.100 3 82 4.5E-20 T 13-10-2018 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 Gene3D G3DSA:2.40.50.100 129 207 3.8E-20 T 13-10-2018 Thivi_3406 1ffd90192f042e4352bfd610c0de0f31 576 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SMART SM00448 689 802 1.3E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Gene3D G3DSA:3.30.565.10 500 663 9.9E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Pfam PF00072 Response regulator receiver domain 691 800 4.5E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SUPERFAMILY SSF158472 209 258 8.89E-7 T 13-10-2018 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SUPERFAMILY SSF55874 490 659 6.29E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Gene3D G3DSA:1.20.1480.50 173 267 1.1E-9 T 13-10-2018 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Pfam PF00512 His Kinase A (phospho-acceptor) domain 433 500 5.2E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Gene3D G3DSA:1.10.287.130 397 499 7.9E-26 T 13-10-2018 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 639 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 614 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 600 2.2E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SUPERFAMILY SSF47384 418 502 9.02E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SMART SM00387 547 661 2.9E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 658 9.2E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 395 6.8E-17 T 13-10-2018 IPR000014 PAS domain Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Gene3D G3DSA:3.40.50.12740 688 812 6.5E-49 T 13-10-2018 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Gene3D G3DSA:3.30.450.20 278 396 2.5E-22 T 13-10-2018 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SMART SM00388 433 501 8.0E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 Pfam PF00989 PAS fold 271 385 5.0E-12 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SUPERFAMILY SSF52172 684 810 2.28E-41 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SUPERFAMILY SSF55785 258 386 1.34E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SMART SM00304 209 261 1.2E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2605 703ae47ff427f96ae0a53f596b790d08 812 SMART SM00091 268 335 5.5E-7 T 13-10-2018 IPR000014 PAS domain Thivi_3388 b34197c75f36c08618a54e8e61b6dbcf 125 Gene3D G3DSA:1.10.20.30 3 49 1.0E-19 T 13-10-2018 Thivi_3388 b34197c75f36c08618a54e8e61b6dbcf 125 Gene3D G3DSA:1.20.5.50 50 104 1.3E-13 T 13-10-2018 Thivi_3388 b34197c75f36c08618a54e8e61b6dbcf 125 Pfam PF05164 Cell division protein ZapA 8 92 2.1E-24 T 13-10-2018 IPR007838 Cell division protein ZapA-like Thivi_3388 b34197c75f36c08618a54e8e61b6dbcf 125 SUPERFAMILY SSF102829 7 96 1.03E-22 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 789 912 1.1E-35 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 Pfam PF13244 Domain of unknown function (DUF4040) 613 676 9.6E-20 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 Pfam PF00361 Proton-conducting membrane transporter 126 410 9.4E-64 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 4.6E-38 T 13-10-2018 Thivi_2962 0264a2c03276557cb9cfa4c47168a5f6 936 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 1.3E-10 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 SUPERFAMILY SSF53137 15 129 1.11E-47 T 13-10-2018 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 Gene3D G3DSA:3.30.420.80 1 129 1.0E-56 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.0E-56 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 PIRSF PIRSF002131 1 129 4.3E-55 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.963 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 Pfam PF00411 Ribosomal protein S11 19 128 9.7E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Thivi_4224 003b8a9660338c533bb2e8c6474242aa 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site Thivi_4241 293beca91f6e3c942a2140d84528966a 222 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 183 5.6E-75 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_4241 293beca91f6e3c942a2140d84528966a 222 Gene3D G3DSA:1.10.3820.10 8 188 3.0E-41 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Thivi_4241 293beca91f6e3c942a2140d84528966a 222 PIRSF PIRSF000013 5 194 3.5E-87 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Thivi_4241 293beca91f6e3c942a2140d84528966a 222 SUPERFAMILY SSF48695 14 188 1.03E-56 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Pfam PF01584 CheW-like domain 521 647 7.0E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Gene3D G3DSA:3.30.565.10 331 515 1.3E-57 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SMART SM00073 7 104 1.5E-20 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 515 2.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Gene3D G3DSA:1.20.120.160 7 136 1.2E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SUPERFAMILY SSF47384 271 331 3.3E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SUPERFAMILY SSF47226 11 129 6.28E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 272 328 5.0E-7 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Pfam PF01627 Hpt domain 11 95 8.2E-14 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Gene3D G3DSA:1.10.287.560 270 330 1.3E-8 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Gene3D G3DSA:2.30.30.40 516 643 3.3E-36 T 13-10-2018 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SMART SM01231 270 330 1.9E-9 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 Gene3D G3DSA:2.40.50.180 539 602 3.3E-36 T 13-10-2018 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SUPERFAMILY SSF55874 332 514 2.1E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SUPERFAMILY SSF50341 515 646 1.57E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SMART SM00260 508 647 1.2E-31 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 5.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 5.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 5.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 434 5.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0317 161a3abda2fcd3d0d9b4366a1d715f61 674 SMART SM00387 375 516 6.6E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 SUPERFAMILY SSF88659 94 159 5.45E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 PIRSF PIRSF000770 1 246 1.4E-37 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 8 241 61.167 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Pfam PF04542 Sigma-70 region 2 20 93 3.2E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Gene3D G3DSA:1.20.140.160 91 241 4.4E-44 T 13-10-2018 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 PRINTS PR00046 Major sigma-70 factor signature 47 60 6.5E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 PRINTS PR00046 Major sigma-70 factor signature 223 234 6.5E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 PRINTS PR00046 Major sigma-70 factor signature 191 203 6.5E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 PRINTS PR00046 Major sigma-70 factor signature 208 223 6.5E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 SUPERFAMILY SSF88946 13 92 5.89E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 SUPERFAMILY SSF88659 158 241 2.24E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 238 2.9E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Pfam PF04539 Sigma-70 region 3 101 171 4.0E-10 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Pfam PF04545 Sigma-70, region 4 187 235 1.8E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 238 1.0E-74 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Thivi_0375 5efda227cfdc5b8bf712d269247017e8 248 Gene3D G3DSA:1.10.1740.10 7 89 8.0E-28 T 13-10-2018 Thivi_3751 de7ef21d271771c444feea9035d80695 365 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 197 213 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 172 1.5E-18 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Gene3D G3DSA:3.90.79.10 237 355 3.2E-15 T 13-10-2018 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Gene3D G3DSA:1.10.1670.10 14 216 8.2E-87 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Pfam PF00633 Helix-hairpin-helix motif 105 132 1.1E-6 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 SUPERFAMILY SSF55811 225 353 1.03E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_3751 de7ef21d271771c444feea9035d80695 365 ProSitePatterns PS01155 Endonuclease III family signature. 107 134 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 SUPERFAMILY SSF48150 9 227 1.24E-75 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Pfam PF14815 NUDIX domain 241 350 6.9E-24 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Thivi_3751 de7ef21d271771c444feea9035d80695 365 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 272 1.3E-109 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Thivi_3751 de7ef21d271771c444feea9035d80695 365 Gene3D G3DSA:1.10.340.30 26 137 8.2E-87 T 13-10-2018 Thivi_3751 de7ef21d271771c444feea9035d80695 365 SMART SM00478 44 195 6.4E-41 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_2528 3ba8981f8613e2d0b514167065204311 116 SUPERFAMILY SSF54913 1 100 6.78E-28 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_2528 3ba8981f8613e2d0b514167065204311 116 Pfam PF02641 Uncharacterized ACR, COG1993 6 84 1.3E-19 T 13-10-2018 IPR003793 Domain of unknown function DUF190 Thivi_2528 3ba8981f8613e2d0b514167065204311 116 Gene3D G3DSA:3.30.70.120 1 93 3.1E-23 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_0073 4eed5400a8d907e7df8278d39c2a55ab 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 5.3E-55 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_0073 4eed5400a8d907e7df8278d39c2a55ab 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 24.243 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_0073 4eed5400a8d907e7df8278d39c2a55ab 193 PIRSF PIRSF006102 1 193 3.6E-52 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_0073 4eed5400a8d907e7df8278d39c2a55ab 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 190 8.6E-78 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_0399 9abf6def98decd63621a8b2b0c3c3426 246 SUPERFAMILY SSF117143 77 204 2.62E-18 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0399 9abf6def98decd63621a8b2b0c3c3426 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 9.3E-34 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0399 9abf6def98decd63621a8b2b0c3c3426 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 241 4.8E-20 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 SUPERFAMILY SSF52943 2 287 3.04E-94 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 Gene3D G3DSA:1.10.287.80 6 283 4.1E-104 T 13-10-2018 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 Pfam PF00231 ATP synthase 5 286 2.0E-96 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 3.8E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 3.8E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.8E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.8E-36 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.889 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 Gene3D G3DSA:3.40.1380.10 61 206 4.1E-104 T 13-10-2018 Thivi_2593 33ec70e40d2a79ed1e7b470403daec7b 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.1E-107 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 Gene3D G3DSA:1.10.300.10 102 201 1.0E-100 T 13-10-2018 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 SMART SM00788 4 424 5.2E-283 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 Gene3D G3DSA:3.40.440.10 6 249 1.0E-100 T 13-10-2018 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 207.784 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 Gene3D G3DSA:3.90.170.10 267 431 1.3E-66 T 13-10-2018 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 Pfam PF00709 Adenylosuccinate synthetase 5 422 9.5E-175 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 8.5E-180 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Thivi_0416 c75021f4d90d73be37ad117821f6ed50 431 SUPERFAMILY SSF52540 3 429 1.06E-171 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4589 856f5e2f068effda9140734de4859c9a 161 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 4.4E-24 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Thivi_4589 856f5e2f068effda9140734de4859c9a 161 Gene3D G3DSA:3.30.70.920 57 141 6.4E-27 T 13-10-2018 Thivi_4589 856f5e2f068effda9140734de4859c9a 161 SUPERFAMILY SSF46785 2 62 3.91E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4589 856f5e2f068effda9140734de4859c9a 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Thivi_4589 856f5e2f068effda9140734de4859c9a 161 SMART SM00344 3 113 3.4E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Thivi_4589 856f5e2f068effda9140734de4859c9a 161 Gene3D G3DSA:1.10.10.10 1 56 1.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4589 856f5e2f068effda9140734de4859c9a 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.8E-20 T 13-10-2018 Thivi_4589 856f5e2f068effda9140734de4859c9a 161 SUPERFAMILY SSF54909 63 153 6.7E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Thivi_4589 856f5e2f068effda9140734de4859c9a 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Thivi_4589 856f5e2f068effda9140734de4859c9a 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Thivi_4589 856f5e2f068effda9140734de4859c9a 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-18 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Thivi_1539 0d6303036b8e82cc8862cb1f910d4f66 162 SUPERFAMILY SSF47413 85 146 5.9E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1539 0d6303036b8e82cc8862cb1f910d4f66 162 SMART SM00530 91 146 9.6E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1539 0d6303036b8e82cc8862cb1f910d4f66 162 Gene3D G3DSA:1.10.260.40 78 154 1.6E-18 T 13-10-2018 Thivi_1539 0d6303036b8e82cc8862cb1f910d4f66 162 Pfam PF01381 Helix-turn-helix 93 144 2.7E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_3555 179f1c7d53023dc784922682736fa710 483 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 437 5.9E-119 T 13-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Thivi_3555 179f1c7d53023dc784922682736fa710 483 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 24 440 6.0E-98 T 13-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Thivi_0954 69d0e04bc0e93f39cf034bc5fcf9f390 145 Pfam PF01814 Hemerythrin HHE cation binding domain 5 127 8.4E-17 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Thivi_0954 69d0e04bc0e93f39cf034bc5fcf9f390 145 Gene3D G3DSA:1.20.120.520 5 141 2.2E-20 T 13-10-2018 Thivi_3006 0ec7ae74675603aa7e7bb29d9fa53923 78 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.628 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3006 0ec7ae74675603aa7e7bb29d9fa53923 78 Pfam PF01809 Haemolytic domain 3 68 7.0E-31 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3006 0ec7ae74675603aa7e7bb29d9fa53923 78 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 15 68 1.0E-16 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3006 0ec7ae74675603aa7e7bb29d9fa53923 78 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 75 9.2E-31 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3006 0ec7ae74675603aa7e7bb29d9fa53923 78 SMART SM01234 1 68 5.3E-46 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Pfam PF01816 Leucine rich repeat variant 162 185 5.8E-6 T 13-10-2018 IPR004830 Leucine rich repeat variant Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Pfam PF01816 Leucine rich repeat variant 139 161 6.9E-5 T 13-10-2018 IPR004830 Leucine rich repeat variant Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Pfam PF01816 Leucine rich repeat variant 210 233 7.9E-7 T 13-10-2018 IPR004830 Leucine rich repeat variant Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Pfam PF01816 Leucine rich repeat variant 114 137 4.6E-6 T 13-10-2018 IPR004830 Leucine rich repeat variant Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Pfam PF05484 LRV protein FeS4 cluster 15 58 7.3E-16 T 13-10-2018 IPR008665 LRV FeS4 cluster Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 SUPERFAMILY SSF48371 15 222 6.17E-41 T 13-10-2018 IPR016024 Armadillo-type fold Thivi_3654 599e3f0e6d6f5b504a53aaec4155fc89 246 Gene3D G3DSA:1.25.10.10 4 245 6.1E-84 T 13-10-2018 IPR011989 Armadillo-like helical Thivi_1236 d3efc7f88ce7f3281e304e6f744123b6 663 Pfam PF13676 TIR domain 515 623 6.7E-13 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Thivi_1236 d3efc7f88ce7f3281e304e6f744123b6 663 SUPERFAMILY SSF52200 510 623 5.36E-17 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_1236 d3efc7f88ce7f3281e304e6f744123b6 663 Gene3D G3DSA:3.40.50.10140 513 649 7.6E-21 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 15 132 1.6E-32 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 Gene3D G3DSA:3.10.129.10 4 144 2.9E-44 T 13-10-2018 Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 PIRSF PIRSF003230 3 146 1.0E-45 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 12 137 1.8E-49 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 Pfam PF03061 Thioesterase superfamily 27 109 2.1E-16 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Thivi_1796 dfd745baafc1cdd3bf21e2388f54165c 153 SUPERFAMILY SSF54637 10 138 3.26E-41 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 20 505 1.5E-190 T 13-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 Gene3D G3DSA:3.50.50.60 17 108 3.9E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 Gene3D G3DSA:3.50.50.60 214 338 5.4E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 SUPERFAMILY SSF51905 16 496 4.23E-73 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 Pfam PF01593 Flavin containing amine oxidoreductase 28 496 2.8E-30 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_2025 53217824e8a208896bc21cc6ba39eb26 509 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 474 494 - T 13-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 Pfam PF12801 4Fe-4S binding domain 110 151 8.4E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 Gene3D G3DSA:2.60.40.10 373 490 1.1E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 371 490 1.1E-26 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 286 297 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 SUPERFAMILY SSF54862 120 348 6.58E-25 T 13-10-2018 Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 Pfam PF13746 4Fe-4S dicluster domain 233 338 2.0E-39 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1043 5342af5e9c56bddd5c6dd99b567a317f 492 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 56 490 3.9E-143 T 13-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.2090.10 700 788 1.3E-275 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.70.1430 557 650 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82693 137 323 1.23E-21 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82714 700 784 1.7E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82693 43 130 9.94E-20 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.70.1440 651 841 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82866 289 488 3.14E-48 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:1.20.1640.10 503 1002 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.70.1430 40 796 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82714 183 264 1.14E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Pfam PF00873 AcrB/AcrD/AcrF family 4 1004 2.8E-253 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.2090.10 179 270 1.3E-275 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82866 784 1006 1.57E-44 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:1.20.1640.10 10 502 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 Gene3D G3DSA:3.30.70.1320 134 323 1.3E-275 T 13-10-2018 Thivi_4559 2b005264acb1e273d0da3fb4c44d8073 1022 SUPERFAMILY SSF82693 553 649 1.88E-14 T 13-10-2018 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 Gene3D G3DSA:3.20.20.70 1 486 8.7E-211 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 SUPERFAMILY SSF51412 2 477 4.97E-125 T 13-10-2018 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 Pfam PF00571 CBS domain 94 138 1.0E-9 T 13-10-2018 IPR000644 CBS domain Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 Pfam PF00571 CBS domain 147 202 5.3E-6 T 13-10-2018 IPR000644 CBS domain Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 1.9E-193 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 SMART SM01240 6 473 0.0 T 13-10-2018 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 SUPERFAMILY SSF54631 93 202 8.59E-28 T 13-10-2018 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 6.7E-161 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 PIRSF PIRSF000130 1 488 1.1E-203 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.701 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 SMART SM00116 156 204 8.4E-8 T 13-10-2018 IPR000644 CBS domain Thivi_2265 0e00300a0e0e561d2537861435b5dfac 488 SMART SM00116 95 142 1.3E-10 T 13-10-2018 IPR000644 CBS domain Thivi_2391 19117ddd793d0af9cce19b659d716086 543 PIRSF PIRSF006439 1 540 2.1E-169 T 13-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 SUPERFAMILY SSF52518 3 214 9.25E-53 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2391 19117ddd793d0af9cce19b659d716086 543 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 360 507 3.6E-21 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 Gene3D G3DSA:3.40.50.970 1 177 6.3E-51 T 13-10-2018 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 Gene3D G3DSA:3.40.50.970 340 529 5.1E-18 T 13-10-2018 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 173 5.3E-12 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 SUPERFAMILY SSF52922 225 286 3.14E-5 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_2391 19117ddd793d0af9cce19b659d716086 543 SUPERFAMILY SSF52518 333 524 2.68E-26 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 SUPERFAMILY SSF116734 215 422 4.74E-33 T 13-10-2018 Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 Gene3D G3DSA:3.90.220.20 16 419 2.2E-69 T 13-10-2018 Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 SUPERFAMILY SSF116734 13 202 2.62E-36 T 13-10-2018 Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 Gene3D G3DSA:1.10.287.1120 160 416 2.2E-69 T 13-10-2018 Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 Pfam PF01420 Type I restriction modification DNA specificity domain 16 191 2.0E-20 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_0590 6d3a355f6beb53b53572221f29bf7819 430 Gene3D G3DSA:3.90.220.20 228 373 2.2E-69 T 13-10-2018 Thivi_2522 2fa892b5050f9fd359aa58be35a38faf 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 219 1.3E-74 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Thivi_2522 2fa892b5050f9fd359aa58be35a38faf 230 SUPERFAMILY SSF161098 6 219 1.44E-48 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_2522 2fa892b5050f9fd359aa58be35a38faf 230 Gene3D G3DSA:1.10.3720.10 1 222 3.8E-58 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_2522 2fa892b5050f9fd359aa58be35a38faf 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 216 1.1E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 441 455 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 SUPERFAMILY SSF160246 80 215 1.52E-22 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 SUPERFAMILY SSF52540 240 621 5.77E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 Gene3D G3DSA:3.30.450.90 208 345 3.7E-32 T 13-10-2018 Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 120 223 1.3E-16 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 Pfam PF00437 Type II/IV secretion system protein 246 513 5.8E-64 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_2761 94f4fd6f6c7542fcacd8731e15284e14 644 Gene3D G3DSA:3.40.50.300 348 622 8.7E-98 T 13-10-2018 Thivi_3104 f004ed6c4f4272ad74b0c521dd4c1d1f 504 SUPERFAMILY SSF52540 1 436 1.42E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3104 f004ed6c4f4272ad74b0c521dd4c1d1f 504 Gene3D G3DSA:3.40.50.300 154 432 2.3E-10 T 13-10-2018 Thivi_3104 f004ed6c4f4272ad74b0c521dd4c1d1f 504 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 327 416 1.6E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_3104 f004ed6c4f4272ad74b0c521dd4c1d1f 504 Gene3D G3DSA:3.40.50.300 1 50 2.0E-7 T 13-10-2018 Thivi_1282 f6657d751fa378bb7c8d94d1859e88d1 290 SUPERFAMILY SSF109998 31 168 5.1E-12 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_1282 f6657d751fa378bb7c8d94d1859e88d1 290 Gene3D G3DSA:3.10.50.40 131 255 7.0E-36 T 13-10-2018 Thivi_1282 f6657d751fa378bb7c8d94d1859e88d1 290 SUPERFAMILY SSF54534 131 228 1.5E-31 T 13-10-2018 Thivi_1282 f6657d751fa378bb7c8d94d1859e88d1 290 Pfam PF13145 PPIC-type PPIASE domain 121 243 5.5E-23 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Thivi_1667 9340b6d70857fa564e495f29cb9874c6 144 SUPERFAMILY SSF52788 6 128 1.7E-36 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Thivi_1667 9340b6d70857fa564e495f29cb9874c6 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 128 1.7E-19 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_1667 9340b6d70857fa564e495f29cb9874c6 144 SMART SM00226 6 134 5.5E-29 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_1667 9340b6d70857fa564e495f29cb9874c6 144 Gene3D G3DSA:3.40.50.2300 4 131 1.0E-36 T 13-10-2018 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 SUPERFAMILY SSF52374 3 653 2.47E-137 T 13-10-2018 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Gene3D G3DSA:1.10.730.20 646 935 8.6E-88 T 13-10-2018 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 4.9E-7 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 9.4E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 9.4E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 9.4E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 9.4E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 407 422 9.4E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 SUPERFAMILY SSF47323 658 934 2.06E-74 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 1.1E-282 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.355 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Gene3D G3DSA:3.40.50.620 25 635 4.9E-234 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 3.7E-210 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 845 3.8E-25 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 SUPERFAMILY SSF50677 204 409 9.42E-52 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3223 1bd45d168c2e9b8d67505252657c1e16 943 Gene3D G3DSA:3.90.740.10 195 414 4.9E-234 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 Gene3D G3DSA:3.90.550.10 2 236 3.9E-71 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 231 2.0E-69 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 SUPERFAMILY SSF53448 7 230 1.42E-55 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 228 3.5E-69 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Thivi_3977 a74aefb435b03d5cdc49f0d1eb00685c 240 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 229 43.156 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 SMART SM00382 221 412 2.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 Pfam PF02881 SRP54-type protein, helical bundle domain 137 201 1.1E-11 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 SMART SM00962 222 423 3.0E-124 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 SMART SM00963 126 207 4.9E-25 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 150 423 63.915 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 SUPERFAMILY SSF52540 217 422 1.19E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 Gene3D G3DSA:1.20.120.140 123 421 8.4E-118 T 13-10-2018 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 Pfam PF00448 SRP54-type protein, GTPase domain 222 422 2.9E-79 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 151 422 2.2E-111 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 Gene3D G3DSA:3.40.50.300 222 411 8.4E-118 T 13-10-2018 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 396 409 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_2986 a7089dcc983736777b0dc0543be8e1fc 423 SUPERFAMILY SSF47364 121 200 2.22E-21 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Thivi_0269 18925269361b47811c50c39df548cb8b 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 347 355 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Thivi_0269 18925269361b47811c50c39df548cb8b 466 Gene3D G3DSA:3.20.20.80 1 443 2.1E-158 T 13-10-2018 Thivi_0269 18925269361b47811c50c39df548cb8b 466 Pfam PF00232 Glycosyl hydrolase family 1 4 442 3.3E-146 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_0269 18925269361b47811c50c39df548cb8b 466 TIGRFAM TIGR03356 BGL: beta-galactosidase 6 435 1.1E-166 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Thivi_0269 18925269361b47811c50c39df548cb8b 466 SUPERFAMILY SSF51445 5 448 1.04E-155 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_0269 18925269361b47811c50c39df548cb8b 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 347 355 1.4E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_0269 18925269361b47811c50c39df548cb8b 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 379 1.4E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_0269 18925269361b47811c50c39df548cb8b 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 283 297 1.4E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_0269 18925269361b47811c50c39df548cb8b 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 406 1.4E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_0269 18925269361b47811c50c39df548cb8b 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 425 1.4E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_2726 7d5da44edf4565605b882938d89b8152 207 SUPERFAMILY SSF48452 93 192 2.85E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2726 7d5da44edf4565605b882938d89b8152 207 Gene3D G3DSA:1.25.40.10 7 202 3.7E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2726 7d5da44edf4565605b882938d89b8152 207 PIRSF PIRSF006170 1 207 1.8E-55 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 Thivi_2726 7d5da44edf4565605b882938d89b8152 207 Pfam PF09976 Tetratricopeptide repeat-like domain 14 205 3.0E-54 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Thivi_2129 a3d02a4e7de20706642814aa86a45058 147 TIGRFAM TIGR01616 nitro_assoc: nitrogenase-associated protein 4 128 8.4E-52 T 13-10-2018 IPR006503 Nitrogenase-associated protein Thivi_2129 a3d02a4e7de20706642814aa86a45058 147 Pfam PF03960 ArsC family 71 106 2.1E-6 T 13-10-2018 IPR006660 Arsenate reductase-like Thivi_2129 a3d02a4e7de20706642814aa86a45058 147 SUPERFAMILY SSF52833 5 118 1.77E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2129 a3d02a4e7de20706642814aa86a45058 147 Gene3D G3DSA:3.40.30.10 2 111 1.4E-17 T 13-10-2018 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Pfam PF13365 Trypsin-like peptidase domain 94 227 3.0E-34 T 13-10-2018 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 SMART SM00228 266 348 1.8E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 SMART SM00228 379 459 1.7E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Pfam PF13180 PDZ domain 266 356 1.8E-16 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Pfam PF13180 PDZ domain 381 460 1.4E-10 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 SUPERFAMILY SSF50156 235 361 2.02E-23 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 SUPERFAMILY SSF50494 4 276 2.27E-64 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Gene3D G3DSA:2.30.42.10 378 470 2.1E-16 T 13-10-2018 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Gene3D G3DSA:2.40.10.120 26 259 5.7E-80 T 13-10-2018 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 465 2.2E-147 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 SUPERFAMILY SSF50156 379 467 4.6E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 306 318 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 2.7E-50 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0605 b35ee62a666035fae8ca1ec8c294d056 471 Gene3D G3DSA:2.30.42.10 261 368 1.0E-28 T 13-10-2018 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Pfam PF00072 Response regulator receiver domain 165 277 5.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Pfam PF00072 Response regulator receiver domain 8 116 2.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 517 3.9E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SUPERFAMILY SSF47384 293 368 1.59E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 367 4.2E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Gene3D G3DSA:3.40.50.2300 2 128 1.3E-34 T 13-10-2018 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SUPERFAMILY SSF55874 359 517 1.2E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SMART SM00448 163 276 2.9E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SMART SM00448 5 119 4.7E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Gene3D G3DSA:1.10.287.130 292 366 8.7E-10 T 13-10-2018 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SUPERFAMILY SSF52172 160 293 2.42E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SMART SM00387 413 518 7.3E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SUPERFAMILY SSF52172 4 125 2.28E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 SMART SM00388 302 368 7.5E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Gene3D G3DSA:3.40.50.2300 158 291 4.8E-38 T 13-10-2018 Thivi_1203 a7d427bd8cf6f536c02160245d311360 518 Gene3D G3DSA:3.30.565.10 367 517 4.2E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 139 159 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 SMART SM00729 135 350 5.7E-40 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 399 7.2E-112 T 13-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 414 5.3E-104 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 Gene3D G3DSA:3.40.50.12160 1 124 3.6E-21 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 SUPERFAMILY SSF102114 126 352 6.28E-50 T 13-10-2018 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 Pfam PF00919 Uncharacterized protein family UPF0004 2 97 1.0E-21 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 Gene3D G3DSA:3.80.30.20 133 362 3.3E-71 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_3783 7eea323ebd1d49a118d7a9edb9708a1f 432 Pfam PF04055 Radical SAM superfamily 140 308 2.9E-22 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1890 55122de59b487a8ae0fda954cdafb216 298 SUPERFAMILY SSF50494 70 285 4.04E-26 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_1890 55122de59b487a8ae0fda954cdafb216 298 Pfam PF13365 Trypsin-like peptidase domain 93 260 1.1E-12 T 13-10-2018 Thivi_1890 55122de59b487a8ae0fda954cdafb216 298 Gene3D G3DSA:2.40.10.10 60 283 1.4E-42 T 13-10-2018 Thivi_1890 55122de59b487a8ae0fda954cdafb216 298 Gene3D G3DSA:2.40.10.10 80 286 1.4E-42 T 13-10-2018 Thivi_3130 f01879a8edee015faeb1028cdb34a4b6 250 Pfam PF07788 PD-(D/E)XK nuclease superfamily 170 239 1.4E-24 T 13-10-2018 IPR012431 PD-(D/E)XK nuclease Thivi_3130 f01879a8edee015faeb1028cdb34a4b6 250 Pfam PF12644 Protein of unknown function (DUF3782) 95 169 6.1E-26 T 13-10-2018 IPR024271 Protein of unknown function DUF3782 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 Gene3D G3DSA:3.30.1490.300 91 150 6.5E-84 T 13-10-2018 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 SUPERFAMILY SSF53067 195 355 1.84E-21 T 13-10-2018 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 Pfam PF11104 Type IV pilus assembly protein PilM; 13 356 3.3E-127 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 SMART SM00842 11 182 8.9E-4 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 Gene3D G3DSA:3.30.420.40 193 320 6.5E-84 T 13-10-2018 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 PIRSF PIRSF019169 1 357 8.7E-117 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 Gene3D G3DSA:3.30.420.40 12 354 6.5E-84 T 13-10-2018 Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 356 2.9E-112 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM Thivi_2852 b41e015d87e1c932c4f4e253a575d139 363 SUPERFAMILY SSF53067 60 178 1.6E-11 T 13-10-2018 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 Gene3D G3DSA:3.40.1350.30 131 272 8.1E-104 T 13-10-2018 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 SUPERFAMILY SSF50249 6 64 5.65E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 260 440 1.1E-22 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 SUPERFAMILY SSF53335 71 440 1.15E-78 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 Gene3D G3DSA:2.40.50.140 1 83 1.1E-26 T 13-10-2018 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 433 8.5E-102 T 13-10-2018 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 441 65.628 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 Gene3D G3DSA:3.40.50.150 84 435 8.1E-104 T 13-10-2018 Thivi_4323 0dc9b3549d4cfb56042077bdcf6f0bbf 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 371 401 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Gene3D G3DSA:3.30.565.10 199 355 6.2E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SUPERFAMILY SSF55785 13 107 1.33E-10 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 355 3.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 1.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Pfam PF00989 PAS fold 15 108 9.0E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Gene3D G3DSA:3.30.450.20 7 120 1.0E-19 T 13-10-2018 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SMART SM00091 10 75 7.7E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SUPERFAMILY SSF47384 129 199 4.9E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SMART SM00387 241 356 1.6E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Gene3D G3DSA:1.10.287.130 141 198 6.5E-13 T 13-10-2018 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 198 8.9E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SMART SM00388 137 202 2.4E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2795 e3b5e21fb4fdc87c816c9f9ce696d9dd 359 SUPERFAMILY SSF55874 204 354 2.88E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3251 928a2704588879f156565b14ee82a84e 524 Gene3D G3DSA:3.30.450.40 129 493 2.5E-140 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3251 928a2704588879f156565b14ee82a84e 524 Gene3D G3DSA:3.30.450.270 318 513 2.5E-140 T 13-10-2018 Thivi_3251 928a2704588879f156565b14ee82a84e 524 Pfam PF01590 GAF domain 149 309 1.1E-16 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3251 928a2704588879f156565b14ee82a84e 524 Gene3D G3DSA:3.30.450.20 18 250 2.5E-140 T 13-10-2018 Thivi_3251 928a2704588879f156565b14ee82a84e 524 SUPERFAMILY SSF55785 10 121 3.14E-16 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3251 928a2704588879f156565b14ee82a84e 524 SUPERFAMILY SSF55781 357 517 6.17E-43 T 13-10-2018 Thivi_3251 928a2704588879f156565b14ee82a84e 524 SMART SM00065 149 323 1.1E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3251 928a2704588879f156565b14ee82a84e 524 Pfam PF00360 Phytochrome region 361 518 4.1E-40 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Thivi_3251 928a2704588879f156565b14ee82a84e 524 PRINTS PR01033 Phytochrome signature 164 183 4.7E-14 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_3251 928a2704588879f156565b14ee82a84e 524 PRINTS PR01033 Phytochrome signature 247 268 4.7E-14 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_3251 928a2704588879f156565b14ee82a84e 524 PRINTS PR01033 Phytochrome signature 446 465 4.7E-14 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_3251 928a2704588879f156565b14ee82a84e 524 PRINTS PR01033 Phytochrome signature 480 498 4.7E-14 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_3251 928a2704588879f156565b14ee82a84e 524 SUPERFAMILY SSF55781 146 314 1.5E-50 T 13-10-2018 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Gene3D G3DSA:3.40.50.11040 7 189 5.1E-45 T 13-10-2018 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Gene3D G3DSA:3.40.50.12320 268 424 9.8E-45 T 13-10-2018 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 23 779 45.263 T 13-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Pfam PF08351 Domain of unknown function (DUF1726) 70 160 3.8E-15 T 13-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Pfam PF13718 GNAT acetyltransferase 2 471 584 9.0E-16 T 13-10-2018 IPR000182 GNAT domain Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Pfam PF13718 GNAT acetyltransferase 2 589 639 2.9E-10 T 13-10-2018 IPR000182 GNAT domain Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 SUPERFAMILY SSF52540 232 378 1.67E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Pfam PF05127 Helicase 270 434 2.1E-53 T 13-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 SUPERFAMILY SSF55729 462 619 1.75E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4477 2147d1da0c0d56c7f3e9d5f41a78eadb 793 Gene3D G3DSA:3.40.630.30 430 636 1.5E-62 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 636 46.654 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 SUPERFAMILY SSF56719 396 629 6.28E-76 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 SUPERFAMILY SSF54211 217 390 4.93E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 566 628 5.1E-24 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 302 318 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 319 334 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 456 477 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 477 489 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 592 606 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 545 567 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 370 395 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 511 527 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 346 369 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 7.3E-101 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 SMART SM00387 27 173 1.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 633 2.4E-302 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Pfam PF01751 Toprim domain 421 529 3.8E-12 T 13-10-2018 IPR006171 TOPRIM domain Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.2E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 570 586 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 422 436 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 487 503 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 274 287 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 525 537 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 505 522 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.1E-58 T 13-10-2018 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Gene3D G3DSA:3.40.50.670 398 631 3.2E-87 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Gene3D G3DSA:3.30.230.10 216 397 1.0E-49 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 SMART SM00433 34 632 3.4E-206 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 SUPERFAMILY SSF55874 4 215 1.96E-65 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Pfam PF00204 DNA gyrase B 218 390 2.0E-35 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4353 506dc7eda227b8ccbeeca14f843981c9 636 Gene3D G3DSA:3.30.565.10 3 215 1.5E-73 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Pfam PF01386 Ribosomal L25p family 9 94 4.8E-27 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 16 97 1.0E-21 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 9 177 8.7E-44 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 SUPERFAMILY SSF50715 6 190 5.93E-55 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Gene3D G3DSA:2.170.120.20 99 191 1.1E-24 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 188 1.5E-27 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 187 30.107 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Gene3D G3DSA:2.40.240.10 3 97 4.8E-31 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_4179 cdde292799acaa033957d04f6835f2fc 202 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 22.029 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Thivi_1599 37e3578309f5d6060417106bc34e811f 352 Pfam PF13728 F plasmid transfer operon protein 50 286 6.5E-76 T 13-10-2018 IPR039555 F plasmid transfer operon protein Thivi_1599 37e3578309f5d6060417106bc34e811f 352 TIGRFAM TIGR02740 TraF-like: TraF-like protein 41 296 7.0E-76 T 13-10-2018 IPR014111 Type IV conjugative transfer system protein TraF-like Thivi_1599 37e3578309f5d6060417106bc34e811f 352 SUPERFAMILY SSF52833 183 288 4.04E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 12 136 3.3E-19 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Gene3D G3DSA:3.40.120.10 189 269 9.6E-29 T 13-10-2018 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Gene3D G3DSA:3.40.120.10 4 148 2.4E-35 T 13-10-2018 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Gene3D G3DSA:3.30.310.50 391 494 3.8E-26 T 13-10-2018 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 424 483 1.1E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Gene3D G3DSA:3.40.120.10 270 389 2.8E-39 T 13-10-2018 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 274 392 3.6E-13 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 SUPERFAMILY SSF53738 10 143 1.06E-25 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 SUPERFAMILY SSF53738 257 390 9.03E-8 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 SUPERFAMILY SSF53738 171 271 2.94E-11 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_3375 54f099f5c9709bfe51371a1563cd34d5 495 SUPERFAMILY SSF55957 424 492 2.62E-11 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 724 746 - T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 SUPERFAMILY SSF81665 261 804 9.55E-14 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Gene3D G3DSA:2.70.150.20 283 398 3.6E-37 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 65 1.8E-13 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 550 807 1.9E-41 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 508 3.9E-41 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 SUPERFAMILY SSF55008 68 142 1.3E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 755 780 1.6E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 724 740 1.6E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 696 712 1.6E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 488 738 4.0E-38 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Pfam PF00122 E1-E2 ATPase 295 471 8.0E-52 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Pfam PF00403 Heavy-metal-associated domain 77 134 3.2E-10 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 SUPERFAMILY SSF56784 491 823 3.67E-53 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Gene3D G3DSA:3.30.70.100 66 137 2.7E-15 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 492 506 2.6E-27 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 681 2.6E-27 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 747 759 2.6E-27 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 743 2.6E-27 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 344 358 2.6E-27 T 13-10-2018 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Gene3D G3DSA:3.40.1110.10 503 656 1.9E-72 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 494 500 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 Gene3D G3DSA:3.40.50.1000 473 776 1.9E-72 T 13-10-2018 IPR023214 HAD superfamily Thivi_1040 66a570feb952c7ec951181fa940eae4c 833 SUPERFAMILY SSF81653 297 394 3.14E-26 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 SUPERFAMILY SSF56219 2 272 8.51E-79 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 270 5.6E-86 T 13-10-2018 Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 270 1.2E-75 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 Gene3D G3DSA:3.60.10.10 2 271 4.1E-70 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_1972 9e664fe9f203f4688eb6af92b6698053 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 263 2.5E-15 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Pfam PF13091 PLD-like domain 139 267 3.0E-10 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Gene3D G3DSA:3.40.50.300 478 679 1.5E-32 T 13-10-2018 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Gene3D G3DSA:3.40.50.300 290 472 1.1E-42 T 13-10-2018 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 SUPERFAMILY SSF56024 126 268 3.81E-13 T 13-10-2018 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 SMART SM00490 563 644 3.1E-14 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Pfam PF04851 Type III restriction enzyme, res subunit 304 459 4.1E-30 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Pfam PF11907 Domain of unknown function (DUF3427) 889 1031 1.6E-18 T 13-10-2018 IPR021835 Protein of unknown function DUF3427 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Pfam PF00271 Helicase conserved C-terminal domain 549 642 5.3E-13 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 Gene3D G3DSA:3.30.870.10 128 288 7.3E-26 T 13-10-2018 Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 SUPERFAMILY SSF52540 358 659 9.69E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4104 9746bb18a66ae37f91c503647b95ab80 1035 SMART SM00487 302 486 1.4E-9 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SUPERFAMILY SSF50341 198 340 3.53E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.30.30.40 376 499 2.5E-37 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Pfam PF01584 CheW-like domain 30 166 1.1E-28 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Pfam PF01584 CheW-like domain 201 340 2.9E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Pfam PF01584 CheW-like domain 374 511 7.8E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.40.50.180 49 114 1.0E-28 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.40.50.180 393 460 2.5E-37 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.40.50.180 220 287 1.8E-28 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.30.30.40 203 330 1.8E-28 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 Gene3D G3DSA:2.30.30.40 32 151 1.0E-28 T 13-10-2018 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SUPERFAMILY SSF50341 26 166 5.89E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SUPERFAMILY SSF50341 371 513 1.44E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SMART SM00260 370 509 1.8E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SMART SM00260 26 164 9.4E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0322 cf5da5ddbb2c575e0bcc8f3395fa700c 527 SMART SM00260 197 338 7.8E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 23 412 53.222 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 Gene3D G3DSA:3.40.50.1100 31 227 4.2E-188 T 13-10-2018 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 Gene3D G3DSA:3.40.50.1100 75 405 4.2E-188 T 13-10-2018 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 28 409 1.4E-193 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 399 2.6E-47 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 SUPERFAMILY SSF53686 24 408 1.17E-151 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 102 116 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0917 eb421cbcadb6167ca6bedc8d3dc64fd3 416 PIRSF PIRSF001413 16 414 8.7E-167 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 ProSitePatterns PS00882 Nickel-dependent hydrogenases b-type cytochrome subunit signature 1. 21 38 - T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 Pfam PF01292 Prokaryotic cytochrome b561 16 221 5.4E-32 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 182 204 7.1E-51 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 7.1E-51 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 56 80 7.1E-51 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 135 154 7.1E-51 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 213 226 7.1E-51 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 14 226 5.1E-72 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 Gene3D G3DSA:1.20.950.20 6 211 1.1E-75 T 13-10-2018 Thivi_3758 8dd685bb2f076c9a229f240de502088e 230 SUPERFAMILY SSF81342 11 226 3.69E-43 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 SUPERFAMILY SSF109604 157 321 1.38E-19 T 13-10-2018 Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 Pfam PF11871 Domain of unknown function (DUF3391) 9 129 3.2E-23 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 Pfam PF13487 HD domain 214 273 1.8E-14 T 13-10-2018 Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 TIGRFAM TIGR00277 HDIG: HDIG domain 162 250 2.2E-12 T 13-10-2018 IPR006675 HDIG domain Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 SMART SM00471 156 291 9.2E-5 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_2453 4d401500a16b6d9b07140bfecda6e855 418 Gene3D G3DSA:1.10.3210.10 10 323 3.3E-42 T 13-10-2018 Thivi_0229 2cdec6481ede213e6160f31b79b98bcf 269 Gene3D G3DSA:2.20.25.110 152 215 1.2E-15 T 13-10-2018 Thivi_0229 2cdec6481ede213e6160f31b79b98bcf 269 SUPERFAMILY SSF53335 47 242 1.05E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0229 2cdec6481ede213e6160f31b79b98bcf 269 Gene3D G3DSA:3.40.50.150 26 234 1.2E-15 T 13-10-2018 Thivi_3328 f76e65cf738be5404c10e9a80d6f9455 207 Gene3D G3DSA:3.90.950.10 5 205 1.4E-78 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_3328 f76e65cf738be5404c10e9a80d6f9455 207 SUPERFAMILY SSF52972 9 200 3.66E-72 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_3328 f76e65cf738be5404c10e9a80d6f9455 207 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 10 200 6.2E-59 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Thivi_3328 f76e65cf738be5404c10e9a80d6f9455 207 Hamap MF_01405 dITP/XTP pyrophosphatase. 8 202 49.646 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Thivi_3328 f76e65cf738be5404c10e9a80d6f9455 207 Pfam PF01725 Ham1 family 10 197 1.4E-56 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 SUPERFAMILY SSF50129 1 94 1.35E-35 T 13-10-2018 IPR011032 GroES-like superfamily Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 3.5E-35 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 SMART SM00883 2 94 1.2E-60 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 Gene3D G3DSA:2.30.33.40 1 95 2.7E-39 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 PRINTS PR00297 10kDa chaperonin signature 81 94 1.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-32 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0711 008c57a9ff74f5d09fadafed0d3eb4f7 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.928 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SUPERFAMILY SSF55073 369 523 1.57E-37 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SUPERFAMILY SSF55785 3 59 1.27E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 240 7.8E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 348 1.2E-11 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00267 353 525 3.9E-38 T 13-10-2018 IPR000160 GGDEF domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Gene3D G3DSA:3.30.450.20 118 244 9.4E-17 T 13-10-2018 Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SUPERFAMILY SSF55785 123 231 5.15E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Gene3D G3DSA:3.30.70.270 359 527 7.3E-43 T 13-10-2018 Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SUPERFAMILY SSF55785 250 349 5.32E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00086 313 355 39.0 T 13-10-2018 IPR001610 PAC motif Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00086 191 233 0.0074 T 13-10-2018 IPR001610 PAC motif Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00052 535 781 3.0E-54 T 13-10-2018 IPR001633 EAL domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Gene3D G3DSA:3.20.20.450 537 787 4.2E-64 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 523 7.0E-30 T 13-10-2018 IPR000160 GGDEF domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00091 118 185 0.098 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00091 241 310 1.1E-6 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SMART SM00091 3 64 1.4E-4 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 520 6.8E-39 T 13-10-2018 IPR000160 GGDEF domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Pfam PF13188 PAS domain 3 55 1.1E-7 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 SUPERFAMILY SSF141868 541 786 2.62E-56 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Gene3D G3DSA:3.30.450.20 245 355 1.7E-28 T 13-10-2018 Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Gene3D G3DSA:3.30.450.20 2 105 3.2E-8 T 13-10-2018 Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Pfam PF00563 EAL domain 543 775 2.4E-53 T 13-10-2018 IPR001633 EAL domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Pfam PF13426 PAS domain 252 349 2.3E-12 T 13-10-2018 IPR000014 PAS domain Thivi_1757 5ad3e637b76ad19f7748927a625f7478 800 Pfam PF08448 PAS fold 126 234 1.0E-8 T 13-10-2018 IPR013656 PAS fold-4 Thivi_3407 402a3476a317505d51003c7496936703 884 SUPERFAMILY SSF52518 55 466 6.66E-141 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3407 402a3476a317505d51003c7496936703 884 Gene3D G3DSA:3.40.50.970 54 468 1.2E-128 T 13-10-2018 Thivi_3407 402a3476a317505d51003c7496936703 884 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 134 291 1.3E-8 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_3407 402a3476a317505d51003c7496936703 884 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 883 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Thivi_3407 402a3476a317505d51003c7496936703 884 SUPERFAMILY SSF52922 698 883 2.97E-60 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3407 402a3476a317505d51003c7496936703 884 Gene3D G3DSA:3.40.50.920 703 884 5.5E-76 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3407 402a3476a317505d51003c7496936703 884 SUPERFAMILY SSF52518 469 697 9.42E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3407 402a3476a317505d51003c7496936703 884 PIRSF PIRSF000156 1 884 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Thivi_3407 402a3476a317505d51003c7496936703 884 Gene3D G3DSA:3.40.50.970 469 702 3.4E-112 T 13-10-2018 Thivi_0833 cf3987d3c20686dba3ea033f4526cf3a 143 SMART SM01321 11 129 5.3E-35 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_0833 cf3987d3c20686dba3ea033f4526cf3a 143 Gene3D G3DSA:3.30.70.1290 3 137 6.9E-38 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_0833 cf3987d3c20686dba3ea033f4526cf3a 143 Pfam PF01797 Transposase IS200 like 12 129 3.9E-34 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_0833 cf3987d3c20686dba3ea033f4526cf3a 143 SUPERFAMILY SSF143422 3 130 1.44E-40 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_1295 cf3987d3c20686dba3ea033f4526cf3a 143 SMART SM01321 11 129 5.3E-35 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1295 cf3987d3c20686dba3ea033f4526cf3a 143 Gene3D G3DSA:3.30.70.1290 3 137 6.9E-38 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_1295 cf3987d3c20686dba3ea033f4526cf3a 143 Pfam PF01797 Transposase IS200 like 12 129 3.9E-34 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1295 cf3987d3c20686dba3ea033f4526cf3a 143 SUPERFAMILY SSF143422 3 130 1.44E-40 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_0851 cf3987d3c20686dba3ea033f4526cf3a 143 SMART SM01321 11 129 5.3E-35 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_0851 cf3987d3c20686dba3ea033f4526cf3a 143 Gene3D G3DSA:3.30.70.1290 3 137 6.9E-38 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_0851 cf3987d3c20686dba3ea033f4526cf3a 143 Pfam PF01797 Transposase IS200 like 12 129 3.9E-34 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_0851 cf3987d3c20686dba3ea033f4526cf3a 143 SUPERFAMILY SSF143422 3 130 1.44E-40 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Pfam PF01588 Putative tRNA binding domain 45 145 7.1E-23 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SMART SM00874 403 471 2.2E-22 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SUPERFAMILY SSF55681 467 687 3.28E-51 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SUPERFAMILY SSF56037 195 396 5.49E-72 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 1.3E-244 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SUPERFAMILY SSF50249 35 196 1.31E-46 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:3.30.56.10 7 180 8.1E-69 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:3.50.40.10 198 395 5.5E-76 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:3.30.56.10 404 476 8.2E-21 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:3.30.70.380 699 792 7.9E-26 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:2.40.50.140 39 154 8.1E-69 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SUPERFAMILY SSF54991 693 791 1.24E-26 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Pfam PF03484 tRNA synthetase B5 domain 408 471 5.1E-15 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Gene3D G3DSA:3.30.930.10 491 689 6.0E-60 T 13-10-2018 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.384 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.2E-24 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SUPERFAMILY SSF46955 406 475 9.16E-17 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 Pfam PF03483 B3/4 domain 212 384 7.7E-68 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SMART SM00873 212 385 8.1E-91 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Thivi_1560 770d66cf3c529d45dbe89b8f7161e386 792 SMART SM00896 698 791 9.6E-32 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 SUPERFAMILY SSF56112 6 328 8.6E-85 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 Gene3D G3DSA:3.30.200.70 14 109 6.4E-122 T 13-10-2018 Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 Gene3D G3DSA:1.20.1270.170 150 311 6.4E-122 T 13-10-2018 Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 Pfam PF01636 Phosphotransferase enzyme family 37 267 2.8E-40 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 Hamap MF_01497 Stress response kinase A [srkA]. 5 322 47.551 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Thivi_1022 9ed8af875a002bac834bd9f3761c98c4 329 Gene3D G3DSA:1.10.510.10 61 262 6.4E-122 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Pfam PF00679 Elongation factor G C-terminus 584 671 2.9E-23 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Gene3D G3DSA:3.30.70.870 390 467 5.9E-22 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SUPERFAMILY SSF50447 245 380 8.25E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Gene3D G3DSA:3.30.230.10 468 672 1.5E-78 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SUPERFAMILY SSF54980 584 674 2.21E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.0E-5 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.0E-5 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.0E-5 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 152 1.0E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SUPERFAMILY SSF54211 463 583 6.57E-42 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Gene3D G3DSA:3.40.50.300 2 266 2.2E-57 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SMART SM00889 464 582 5.4E-60 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Gene3D G3DSA:2.40.30.10 279 389 2.9E-20 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SUPERFAMILY SSF52540 4 262 1.25E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Pfam PF03764 Elongation factor G, domain IV 463 582 1.8E-40 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SUPERFAMILY SSF54980 389 466 1.04E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Gene3D G3DSA:3.30.70.240 588 659 1.5E-78 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Pfam PF14492 Elongation Factor G, domain II 389 461 3.0E-21 T 13-10-2018 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 Pfam PF00009 Elongation factor Tu GTP binding domain 8 261 3.5E-36 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2227 3ca7542421cbf5bac7fe7d603b60e6f7 681 SMART SM00838 584 672 1.1E-24 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_2868 a6f48b0a12a603423281b7535cf78c55 366 SUPERFAMILY SSF53067 94 187 1.26E-7 T 13-10-2018 Thivi_2868 a6f48b0a12a603423281b7535cf78c55 366 Pfam PF05137 Fimbrial assembly protein (PilN) 288 359 1.3E-6 T 13-10-2018 IPR007813 Fimbrial assembly PilN Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Pfam PF09397 Ftsk gamma domain 776 835 1.2E-26 T 13-10-2018 IPR018541 FtsK gamma domain Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Pfam PF01580 FtsK/SpoIIIE family 454 669 7.1E-66 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 17 192 9.6E-40 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 SUPERFAMILY SSF52540 428 741 1.5E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 SMART SM00843 774 839 2.6E-35 T 13-10-2018 IPR018541 FtsK gamma domain Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Gene3D G3DSA:3.30.980.40 346 450 1.4E-33 T 13-10-2018 Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Gene3D G3DSA:1.10.10.10 771 835 4.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 SMART SM00382 489 690 0.0021 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 Gene3D G3DSA:3.40.50.300 451 756 8.2E-115 T 13-10-2018 Thivi_4302 b19ebe6cf58b96c607a0e019dfd7e68d 848 SUPERFAMILY SSF46785 774 839 2.72E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.3E-47 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 3.1E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 3.1E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 3.1E-40 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 SUPERFAMILY SSF50104 2 113 1.91E-46 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 Gene3D G3DSA:2.30.30.790 5 114 2.1E-17 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 PIRSF PIRSF002191 1 114 2.5E-48 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 Pfam PF01245 Ribosomal protein L19 3 113 1.7E-47 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4320 db3c128369c3060cbc92ced936f1164a 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 29.902 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 Gene3D G3DSA:2.40.50.230 357 458 1.8E-44 T 13-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 506 1.1E-156 T 13-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 1.3E-194 T 13-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 SUPERFAMILY SSF69255 366 454 3.14E-33 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 Gene3D G3DSA:2.30.110.50 14 325 5.4E-123 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 SUPERFAMILY SSF69349 444 626 1.57E-44 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 Pfam PF05954 Phage late control gene D protein (GPD) 30 324 2.9E-99 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 Gene3D G3DSA:3.55.50.10 98 189 5.4E-123 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 Gene3D G3DSA:3.30.1920.30 225 287 5.4E-123 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 SUPERFAMILY SSF69279 12 185 3.15E-62 T 13-10-2018 Thivi_2297 19075651c540dd84f9212aa8a13ea7ac 716 SUPERFAMILY SSF69279 189 366 6.12E-36 T 13-10-2018 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 PIRSF PIRSF002900 1 47 5.8E-24 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 PRINTS PR00674 Light harvesting protein B chain signature 9 29 2.6E-12 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 PRINTS PR00674 Light harvesting protein B chain signature 29 46 2.6E-12 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 Pfam PF00556 Antenna complex alpha/beta subunit 14 47 4.4E-13 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 Gene3D G3DSA:1.20.5.250 1 47 2.1E-25 T 13-10-2018 Thivi_1997 4b236aaf4daea3e4aac937713cf0f3fa 47 SUPERFAMILY SSF56918 3 47 6.28E-18 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 158 230 3.9E-6 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 449 482 4.8E-6 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 SUPERFAMILY SSF64484 12 1389 0.0 T 13-10-2018 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:2.40.50.100 742 816 6.3E-31 T 13-10-2018 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF04560 RNA polymerase Rpb2, domain 7 1314 1388 5.9E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1390 12.376 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 8.1E-24 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:2.40.50.150 861 981 5.8E-44 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF04563 RNA polymerase beta subunit 27 527 2.6E-39 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 1.9E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:3.90.1110.10 324 469 9.8E-30 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1387 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1108 1120 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:2.40.270.10 818 860 5.7E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:3.90.1100.10 470 655 3.0E-69 T 13-10-2018 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:3.90.1800.10 1300 1355 8.3E-11 T 13-10-2018 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Pfam PF00562 RNA polymerase Rpb2, domain 6 745 1312 2.0E-159 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:2.40.270.10 1035 1290 2.6E-84 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:3.90.1100.10 18 177 2.3E-51 T 13-10-2018 Thivi_4194 c795e905e42f867678a1ad13cefd070c 1390 Gene3D G3DSA:3.90.1100.10 671 741 3.5E-21 T 13-10-2018 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 230 5.0E-27 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 Gene3D G3DSA:3.30.1240.10 82 186 9.7E-60 T 13-10-2018 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 SUPERFAMILY SSF56784 1 263 7.78E-60 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2224 6843b438aa8445635188192b2627f2b4 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 13-10-2018 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 Gene3D G3DSA:3.40.50.1000 5 255 9.7E-60 T 13-10-2018 IPR023214 HAD superfamily Thivi_2224 6843b438aa8445635188192b2627f2b4 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 2.1E-52 T 13-10-2018 Thivi_2224 6843b438aa8445635188192b2627f2b4 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 1.1E-47 T 13-10-2018 IPR000150 Cof family GO:0016787 Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 Gene3D G3DSA:1.10.287.950 329 607 7.2E-68 T 13-10-2018 Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 591 4.5E-32 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 SMART SM01358 37 290 8.8E-64 T 13-10-2018 IPR032255 Helical bimodular sensor domain Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 SUPERFAMILY SSF58104 356 607 1.83E-58 T 13-10-2018 Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 160 3.2E-8 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_0311 c2a9bc316e19787cf193c666d30903f4 652 SMART SM00283 373 606 3.7E-63 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1400 73afb8e4d01a8ee22c8f79b1e1ae8a67 149 Pfam PF05099 Tellurite resistance protein TerB 5 144 1.0E-35 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Thivi_1400 73afb8e4d01a8ee22c8f79b1e1ae8a67 149 Gene3D G3DSA:1.10.3680.10 13 141 1.5E-15 T 13-10-2018 IPR029024 TerB-like Thivi_1400 73afb8e4d01a8ee22c8f79b1e1ae8a67 149 SUPERFAMILY SSF158682 6 148 2.88E-24 T 13-10-2018 IPR029024 TerB-like Thivi_1107 7489e2a24ec6880752e2e3da86c77134 146 SUPERFAMILY SSF46689 45 144 1.34E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1107 7489e2a24ec6880752e2e3da86c77134 146 Pfam PF13565 Homeodomain-like domain 61 142 6.3E-13 T 13-10-2018 Thivi_2044 7489e2a24ec6880752e2e3da86c77134 146 SUPERFAMILY SSF46689 45 144 1.34E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2044 7489e2a24ec6880752e2e3da86c77134 146 Pfam PF13565 Homeodomain-like domain 61 142 6.3E-13 T 13-10-2018 Thivi_2950 7489e2a24ec6880752e2e3da86c77134 146 SUPERFAMILY SSF46689 45 144 1.34E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2950 7489e2a24ec6880752e2e3da86c77134 146 Pfam PF13565 Homeodomain-like domain 61 142 6.3E-13 T 13-10-2018 Thivi_2641 7489e2a24ec6880752e2e3da86c77134 146 SUPERFAMILY SSF46689 45 144 1.34E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2641 7489e2a24ec6880752e2e3da86c77134 146 Pfam PF13565 Homeodomain-like domain 61 142 6.3E-13 T 13-10-2018 Thivi_1826 6d939227623a9b5dbf15ae27940ce080 351 PIRSF PIRSF006268 13 345 5.0E-85 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_1826 6d939227623a9b5dbf15ae27940ce080 351 Pfam PF02424 ApbE family 46 329 5.4E-80 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_1826 6d939227623a9b5dbf15ae27940ce080 351 Gene3D G3DSA:3.10.520.20 30 350 1.0E-106 T 13-10-2018 Thivi_1826 6d939227623a9b5dbf15ae27940ce080 351 SUPERFAMILY SSF143631 39 349 2.35E-91 T 13-10-2018 IPR003374 ApbE-like superfamily Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Pfam PF09084 NMT1/THI5 like 39 245 1.5E-44 T 13-10-2018 IPR015168 SsuA/THI5-like Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 335 566 4.3E-55 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.30.565.10 988 1143 4.2E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SMART SM00388 905 988 0.0036 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SMART SM00387 1030 1143 2.7E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SUPERFAMILY SSF47384 900 967 7.65E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 593 814 1.6E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 429 529 4.3E-55 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 347 569 1.5E-28 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1127 1140 1.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1102 1120 1.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1089 1099 1.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1071 1085 1.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SUPERFAMILY SSF53850 593 816 9.59E-39 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 677 772 5.4E-58 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SUPERFAMILY SSF53850 345 569 1.21E-40 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SUPERFAMILY SSF55874 988 1141 8.25E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SUPERFAMILY SSF53850 28 254 1.78E-22 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 109 206 2.0E-61 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SMART SM00062 344 570 8.4E-18 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 SMART SM00062 592 816 7.2E-18 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 31 296 2.0E-61 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:1.10.287.130 882 982 1.1E-16 T 13-10-2018 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1034 1140 5.7E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Pfam PF00512 His Kinase A (phospho-acceptor) domain 905 977 7.2E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0038 697075cefb45cdeda060c456c74cc96f 1177 Gene3D G3DSA:3.40.190.10 582 812 5.4E-58 T 13-10-2018 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1855 1886 3.4E-11 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1672 1702 1.8E-5 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1759 1789 1.5E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF141072 711 824 1.83E-18 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SMART SM00112 182 266 0.08 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SMART SM00112 2253 2344 1.2E-7 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF49313 2240 2333 3.28E-13 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF51126 1708 1830 1.54E-10 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF03160 Calx-beta domain 816 915 8.6E-19 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF03160 Calx-beta domain 711 798 5.9E-7 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Gene3D G3DSA:2.60.40.60 2225 2333 1.6E-14 T 13-10-2018 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF49313 169 259 1.06E-6 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Gene3D G3DSA:2.60.40.2030 832 951 1.1E-28 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF00028 Cadherin domain 2241 2331 4.1E-8 T 13-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF51126 1837 2189 7.85E-14 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF13205 Bacterial Ig-like domain 581 708 2.3E-17 T 13-10-2018 IPR032812 SbsA, Ig-like domain Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 1672 1701 2.5E-4 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 1952 1978 0.0033 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 2064 2088 0.36 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 2039 2069 1.9E-4 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 1856 1885 6.7E-10 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 1578 1611 0.17 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Pfam PF12951 Passenger-associated-transport-repeat 1760 1789 6.0E-9 T 13-10-2018 IPR013425 Autotransporter-associated beta strand repeat Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Gene3D G3DSA:2.60.40.2030 711 824 7.3E-12 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SMART SM00237 694 799 0.042 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SMART SM00237 815 915 1.1E-17 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 Gene3D G3DSA:2.60.40.60 173 262 5.3E-9 T 13-10-2018 Thivi_2099 d954f5a7b09e919ba88397eb6d8cc3ee 2752 SUPERFAMILY SSF141072 826 947 5.36E-33 T 13-10-2018 IPR038081 CalX-like domain superfamily Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 Gene3D G3DSA:3.40.50.720 1 309 3.9E-73 T 13-10-2018 Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 SUPERFAMILY SSF51735 12 260 3.71E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 Pfam PF00106 short chain dehydrogenase 15 215 7.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.7E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_2019 1915ef5df6f17d9d883c1b91c9150d58 322 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 SUPERFAMILY SSF55781 30 200 1.81E-22 T 13-10-2018 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 494 511 9.1E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 511 531 9.1E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 428 437 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 SUPERFAMILY SSF52540 215 456 9.61E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 SMART SM00065 46 193 5.7E-24 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Pfam PF00158 Sigma-54 interaction domain 216 382 2.0E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 302 317 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 240 253 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Gene3D G3DSA:1.10.8.60 388 465 4.8E-22 T 13-10-2018 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 SMART SM00382 236 379 8.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Pfam PF13185 GAF domain 45 183 5.3E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Gene3D G3DSA:1.10.10.60 484 535 1.6E-9 T 13-10-2018 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Gene3D G3DSA:3.30.450.40 27 195 1.9E-35 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 28 535 8.4E-213 T 13-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Pfam PF02954 Bacterial regulatory protein, Fis family 492 526 7.7E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3392 565503a93d85a8ff682ffd8ee8fd958b 535 Gene3D G3DSA:3.40.50.300 202 387 3.7E-67 T 13-10-2018 Thivi_0489 c67bf9a89eed81ebe4e9197c2bf25ce3 109 SMART SM00834 1 42 2.4E-22 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Thivi_0489 c67bf9a89eed81ebe4e9197c2bf25ce3 109 Pfam PF09723 Zinc ribbon domain 1 41 2.6E-18 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Thivi_0489 c67bf9a89eed81ebe4e9197c2bf25ce3 109 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 5.3E-24 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 Gene3D G3DSA:1.20.81.30 64 176 8.3E-27 T 13-10-2018 Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 169 197 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 Pfam PF00482 Type II secretion system (T2SS), protein F 75 197 7.9E-28 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 Pfam PF00482 Type II secretion system (T2SS), protein F 279 396 1.4E-24 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 169 197 3.0E-12 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 405 3.0E-12 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 3.0E-12 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 70 82 3.0E-12 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0183 9193b8ad34525dad811d5be693bb673d 405 Gene3D G3DSA:1.20.81.30 260 374 1.4E-24 T 13-10-2018 Thivi_0941 4dfd022550a6833d098f356a8f9d258d 120 SUPERFAMILY SSF57652 40 120 1.03E-27 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Thivi_0941 4dfd022550a6833d098f356a8f9d258d 120 Pfam PF01355 High potential iron-sulfur protein 47 116 5.6E-24 T 13-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 Thivi_0941 4dfd022550a6833d098f356a8f9d258d 120 Gene3D G3DSA:4.10.490.10 39 120 3.5E-26 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 SUPERFAMILY SSF56719 35 487 9.42E-155 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 746 0.0 T 13-10-2018 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 7.2E-132 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Gene3D G3DSA:3.30.1360.40 242 335 2.4E-175 T 13-10-2018 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 749 34.249 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 700 3.8E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 SUPERFAMILY SSF101904 502 746 1.57E-47 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Gene3D G3DSA:2.120.10.90 504 739 5.8E-11 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Gene3D G3DSA:1.10.268.10 373 458 2.4E-175 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 SMART SM00434 15 465 5.4E-226 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_4562 c4e499032f04b8c31a78dd555e288bad 751 Gene3D G3DSA:3.90.199.10 36 485 2.4E-175 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Gene3D G3DSA:1.10.10.160 114 187 6.5E-101 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Gene3D G3DSA:3.40.50.300 281 637 1.9E-124 T 13-10-2018 Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 617 6.5E-71 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Gene3D G3DSA:3.40.50.300 10 273 6.5E-101 T 13-10-2018 Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Gene3D G3DSA:1.10.486.10 383 539 1.9E-124 T 13-10-2018 Thivi_2845 200209df3086cef609ac1d7f6943d233 723 SUPERFAMILY SSF52540 7 643 7.48E-181 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2845 200209df3086cef609ac1d7f6943d233 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 9.6E-76 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Thivi_4631 419be5a4af72a781a8c3329eaae73d26 1178 Gene3D G3DSA:3.40.50.300 898 1162 1.6E-13 T 13-10-2018 Thivi_4631 419be5a4af72a781a8c3329eaae73d26 1178 SUPERFAMILY SSF52540 1 1156 4.52E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4631 419be5a4af72a781a8c3329eaae73d26 1178 Gene3D G3DSA:3.40.50.300 1 333 4.8E-18 T 13-10-2018 Thivi_4631 419be5a4af72a781a8c3329eaae73d26 1178 Pfam PF13514 AAA domain 1 206 3.5E-71 T 13-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 314 2.6E-29 T 13-10-2018 IPR000160 GGDEF domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SMART SM00052 329 575 1.0E-122 T 13-10-2018 IPR001633 EAL domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Gene3D G3DSA:3.30.70.270 154 332 3.3E-47 T 13-10-2018 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SUPERFAMILY SSF55073 164 320 1.18E-38 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SUPERFAMILY SSF141868 334 583 2.88E-94 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Pfam PF00072 Response regulator receiver domain 6 117 3.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Pfam PF00072 Response regulator receiver domain 600 710 7.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Gene3D G3DSA:3.40.50.2300 1 130 4.2E-35 T 13-10-2018 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Gene3D G3DSA:3.40.50.2300 588 726 4.3E-29 T 13-10-2018 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SMART SM00448 597 709 9.2E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SMART SM00448 3 117 3.1E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SMART SM00267 148 319 1.9E-39 T 13-10-2018 IPR000160 GGDEF domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Gene3D G3DSA:3.20.20.450 333 585 5.2E-106 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 313 1.0E-36 T 13-10-2018 IPR000160 GGDEF domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 Pfam PF00563 EAL domain 335 570 4.8E-74 T 13-10-2018 IPR001633 EAL domain Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SUPERFAMILY SSF52172 597 721 4.13E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1257 4d6dee390f582687ace8368eb14ee3bd 736 SUPERFAMILY SSF52172 4 151 2.13E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3955 7830827487ed427517077bde63ab6e40 492 Gene3D G3DSA:3.40.50.300 62 310 1.0E-33 T 13-10-2018 Thivi_3955 7830827487ed427517077bde63ab6e40 492 SUPERFAMILY SSF52540 59 256 5.03E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3955 7830827487ed427517077bde63ab6e40 492 Pfam PF00350 Dynamin family 62 211 4.7E-12 T 13-10-2018 IPR022812 Dynamin superfamily Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.0E-25 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 Gene3D G3DSA:2.20.28.120 1 55 6.3E-29 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 Pfam PF00471 Ribosomal protein L33 8 53 1.5E-17 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.633 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3271 339c3639092fc2f78fef8a6bf2f97942 55 SUPERFAMILY SSF57829 1 53 1.4E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 TIGRFAM TIGR03088 stp2: sugar transferase, PEP-CTERM/EpsH1 system associated 14 386 1.3E-157 T 13-10-2018 IPR017522 Sugar transferase, PEP-CTERM, Stp2 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 Pfam PF13439 Glycosyltransferase Family 4 25 185 3.1E-18 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 SUPERFAMILY SSF53756 16 387 8.57E-74 T 13-10-2018 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 Gene3D G3DSA:3.40.50.2000 54 382 3.4E-62 T 13-10-2018 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 Pfam PF00534 Glycosyl transferases group 1 204 362 1.6E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3679 6286c26de41c820cc32734c3c37a4755 391 Gene3D G3DSA:3.40.50.2000 181 369 3.4E-62 T 13-10-2018 Thivi_1978 506f60f19c3092007525c9bdaa3ffb30 476 PIRSF PIRSF016565 16 474 3.6E-119 T 13-10-2018 IPR026036 PucC protein Thivi_1978 506f60f19c3092007525c9bdaa3ffb30 476 SUPERFAMILY SSF103473 35 459 3.27E-26 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_1978 506f60f19c3092007525c9bdaa3ffb30 476 Pfam PF03209 PUCC protein 55 458 5.6E-132 T 13-10-2018 IPR004896 PucC-related Thivi_1978 506f60f19c3092007525c9bdaa3ffb30 476 Gene3D G3DSA:1.20.1250.20 33 453 6.1E-17 T 13-10-2018 Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 Gene3D G3DSA:1.20.81.30 255 366 6.1E-27 T 13-10-2018 Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 Pfam PF00482 Type II secretion system (T2SS), protein F 69 191 3.7E-31 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 392 1.4E-24 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 2.5E-21 T 13-10-2018 IPR003004 GspF/PilC family Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 2.5E-21 T 13-10-2018 IPR003004 GspF/PilC family Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 2.5E-21 T 13-10-2018 IPR003004 GspF/PilC family Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 2.5E-21 T 13-10-2018 IPR003004 GspF/PilC family Thivi_2828 da4cc28f5f3b383ea318d2224abf8a38 402 Gene3D G3DSA:1.20.81.30 53 170 1.4E-29 T 13-10-2018 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.2E-127 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 SUPERFAMILY SSF52540 34 221 1.59E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Gene3D G3DSA:3.40.50.300 13 177 3.0E-102 T 13-10-2018 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.9E-41 T 13-10-2018 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.8E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.8E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 435 548 1.3E-10 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Gene3D G3DSA:1.10.8.60 8 240 3.0E-102 T 13-10-2018 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Gene3D G3DSA:3.30.300.150 423 538 7.7E-12 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 SUPERFAMILY SSF48019 243 362 5.44E-30 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 SMART SM00382 37 185 3.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 360 2.9E-29 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Thivi_2713 2afb072a84c67dccd62b5fb2017ecb3c 558 Gene3D G3DSA:1.20.272.10 242 361 9.2E-40 T 13-10-2018 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 19 37 - T 13-10-2018 IPR019844 Cold-shock conserved site Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 Gene3D G3DSA:2.40.50.140 5 68 2.5E-30 T 13-10-2018 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 Pfam PF00313 'Cold-shock' DNA-binding domain 7 69 2.5E-27 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 PRINTS PR00050 Cold shock protein signature 8 23 1.6E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 PRINTS PR00050 Cold shock protein signature 43 61 1.6E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 PRINTS PR00050 Cold shock protein signature 28 37 1.6E-16 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 SUPERFAMILY SSF50249 4 69 1.51E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 SMART SM00357 7 70 2.8E-28 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_4305 dea31f5ddffa171cea1978bd4a786012 70 PIRSF PIRSF002599 1 70 1.4E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Pfam PF13692 Glycosyl transferases group 1 1620 1755 8.0E-22 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Pfam PF00535 Glycosyl transferase family 2 1165 1335 2.2E-27 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Pfam PF00535 Glycosyl transferase family 2 254 365 9.7E-11 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Gene3D G3DSA:3.40.50.2000 1615 1772 8.6E-14 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Gene3D G3DSA:3.40.50.2000 732 883 1.1E-5 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Pfam PF13489 Methyltransferase domain 11 175 2.0E-19 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Gene3D G3DSA:3.40.50.150 18 223 8.8E-36 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 SUPERFAMILY SSF53448 251 474 2.67E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 SUPERFAMILY SSF53448 1159 1405 2.91E-57 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 SUPERFAMILY SSF53756 1446 1789 3.77E-22 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Gene3D G3DSA:3.90.550.10 1157 1382 3.4E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 Gene3D G3DSA:3.90.550.10 240 479 1.5E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 SUPERFAMILY SSF53756 529 851 2.51E-18 T 13-10-2018 Thivi_2679 56f61cafc3ff1ec36de151b32dee5681 1795 SUPERFAMILY SSF53335 14 180 3.35E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 3 466 1.3E-203 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 SMART SM01230 100 377 3.9E-152 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 12 93 1.1E-30 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 ProSitePatterns PS00180 Glutamine synthetase signature 1. 48 66 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 Pfam PF00120 Glutamine synthetase, catalytic domain 100 464 1.9E-137 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 Gene3D G3DSA:3.30.590.10 103 455 5.5E-146 T 13-10-2018 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 SUPERFAMILY SSF54368 2 97 7.98E-37 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 384 396 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 Gene3D G3DSA:3.10.20.70 1 102 2.9E-39 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Thivi_2797 ae9bab6b5b1293ffb4abed8305cdc3a3 467 SUPERFAMILY SSF55931 100 466 5.69E-138 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 SUPERFAMILY SSF51735 3 167 3.88E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 314 3.0E-66 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.3E-132 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 Gene3D G3DSA:3.30.360.10 150 316 6.7E-148 T 13-10-2018 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 Gene3D G3DSA:3.40.50.720 4 327 6.7E-148 T 13-10-2018 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.3E-45 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.3E-45 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.3E-45 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.3E-45 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.3E-45 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 3.2E-38 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 SUPERFAMILY SSF55347 150 314 3.27E-74 T 13-10-2018 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 PIRSF PIRSF000149 1 333 2.0E-130 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2347 0aee1448e1488c3b0028a62af812a60c 333 SMART SM00846 3 151 7.0E-93 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 PRINTS PR00207 Flagellin signature 109 132 2.9E-7 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 PRINTS PR00207 Flagellin signature 35 52 2.9E-7 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 PRINTS PR00207 Flagellin signature 74 93 2.9E-7 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 SUPERFAMILY SSF64518 1 433 1.44E-75 T 13-10-2018 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.3E-27 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 433 4.0E-85 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 Gene3D G3DSA:1.20.1330.10 40 232 4.1E-46 T 13-10-2018 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 Gene3D G3DSA:1.20.1330.10 282 409 3.0E-8 T 13-10-2018 Thivi_0405 6ada59714bf4f53a77b02d63de9efdf2 433 Pfam PF00700 Bacterial flagellin C-terminal helical region 352 433 5.9E-6 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0208 f1481c5b2bddf445cdba6b231ae2c34a 295 SUPERFAMILY SSF117892 75 201 4.05E-18 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Thivi_0208 f1481c5b2bddf445cdba6b231ae2c34a 295 Gene3D G3DSA:3.30.479.30 82 191 1.8E-10 T 13-10-2018 Thivi_0208 f1481c5b2bddf445cdba6b231ae2c34a 295 Pfam PF01145 SPFH domain / Band 7 family 37 205 9.4E-14 T 13-10-2018 IPR001107 Band 7 domain Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 398 4.6E-121 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 399 48.692 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Gene3D G3DSA:3.10.290.10 326 399 4.0E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 SUPERFAMILY SSF52374 6 316 2.07E-94 T 13-10-2018 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 SUPERFAMILY SSF55174 321 398 7.85E-17 T 13-10-2018 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 1.7E-76 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Pfam PF01479 S4 domain 341 376 2.9E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Gene3D G3DSA:1.10.240.10 218 325 3.8E-31 T 13-10-2018 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 7.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 7.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 7.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 7.9E-26 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Thivi_3085 ed4bf3b025f160c648474231e315b18e 400 Gene3D G3DSA:3.40.50.620 5 217 1.7E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 385 2.9E-37 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Gene3D G3DSA:1.10.1740.10 309 394 1.2E-25 T 13-10-2018 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 SUPERFAMILY SSF69055 298 392 5.49E-26 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 390 5.3E-149 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 6.0E-43 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 SUPERFAMILY SSF51735 3 151 6.16E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 SUPERFAMILY SSF55347 127 270 1.77E-61 T 13-10-2018 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Gene3D G3DSA:3.40.50.720 1 151 2.4E-50 T 13-10-2018 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 235 3.3E-38 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 PIRSF PIRSF006205 2 395 6.3E-147 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2751 e86cda04d48751dfb3899cc863e58761 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 390 45.953 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Thivi_2619 7e9d63b926f1d07b0f64d8d94b0e8197 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Thivi_2619 7e9d63b926f1d07b0f64d8d94b0e8197 394 Gene3D G3DSA:3.90.1150.10 27 389 1.8E-129 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_2619 7e9d63b926f1d07b0f64d8d94b0e8197 394 SUPERFAMILY SSF53383 4 392 9.63E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2619 7e9d63b926f1d07b0f64d8d94b0e8197 394 Pfam PF00155 Aminotransferase class I and II 32 389 5.9E-72 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_2619 7e9d63b926f1d07b0f64d8d94b0e8197 394 Gene3D G3DSA:3.40.640.10 64 287 1.8E-129 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0068 b6d3eeea63ed9d7494f71cec564f9734 223 PIRSF PIRSF006102 1 217 1.7E-67 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_0068 b6d3eeea63ed9d7494f71cec564f9734 223 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 2 211 26.316 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_0068 b6d3eeea63ed9d7494f71cec564f9734 223 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 209 7.5E-73 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_0068 b6d3eeea63ed9d7494f71cec564f9734 223 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 200 2.3E-58 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_0848 0e0f88c5efd7882b3c16783ead6bbccd 155 Pfam PF06271 RDD family 11 138 3.4E-24 T 13-10-2018 IPR010432 RDD Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 SUPERFAMILY SSF52540 118 596 8.4E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 124 592 2.1E-174 T 13-10-2018 IPR022458 Conjugative coupling factor TraG/TraD Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 144 289 2.0E-9 T 13-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 Gene3D G3DSA:3.40.50.300 112 279 6.4E-13 T 13-10-2018 Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 Gene3D G3DSA:3.40.50.300 378 595 7.2E-27 T 13-10-2018 Thivi_1519 07e2b7fc4e6ad5a4d17bb0ffea798f0f 621 Pfam PF12696 TraM recognition site of TraD and TraG 445 571 1.1E-13 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 SMART SM00422 5 78 0.0014 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 ProSitePatterns PS00397 Site-specific recombinases active site. 63 71 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 Pfam PF00239 Resolvase, N terminal domain 60 187 3.5E-17 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 SMART SM00857 60 197 9.4E-18 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 Gene3D G3DSA:1.10.1660.10 6 57 2.0E-13 T 13-10-2018 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 Gene3D G3DSA:3.40.50.1390 58 158 6.1E-22 T 13-10-2018 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 Pfam PF13411 MerR HTH family regulatory protein 5 51 5.8E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 SUPERFAMILY SSF53041 59 190 4.58E-20 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_3486 f5d974e93ddebd3a9122c27518669e8e 209 SUPERFAMILY SSF46955 5 53 2.38E-11 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 Gene3D G3DSA:3.90.70.10 408 510 2.9E-40 T 13-10-2018 Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 SMART SM00382 42 196 1.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 Pfam PF01471 Putative peptidoglycan binding domain 524 578 2.6E-9 T 13-10-2018 IPR002477 Peptidoglycan binding-like Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 Pfam PF13401 AAA domain 42 172 1.3E-24 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 SUPERFAMILY SSF47090 510 586 5.49E-12 T 13-10-2018 IPR036365 PGBD-like superfamily Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 Gene3D G3DSA:3.40.50.300 25 188 6.9E-18 T 13-10-2018 Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 SUPERFAMILY SSF52540 6 263 6.84E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2438 60520cda3ac2617cf0f05904e8c385df 607 Gene3D G3DSA:1.10.101.10 511 582 2.9E-40 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Thivi_1610 c436f462f88fbe2574493dfc06da1c05 317 Gene3D G3DSA:3.40.50.300 49 217 3.4E-29 T 13-10-2018 Thivi_1610 c436f462f88fbe2574493dfc06da1c05 317 Pfam PF07728 AAA domain (dynein-related subfamily) 60 180 7.7E-22 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_1610 c436f462f88fbe2574493dfc06da1c05 317 SUPERFAMILY SSF52540 54 278 5.49E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1610 c436f462f88fbe2574493dfc06da1c05 317 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 214 305 5.4E-20 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1610 c436f462f88fbe2574493dfc06da1c05 317 SMART SM00382 56 209 2.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1274 0af945269cb8b29acda9b387548378b3 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 552 3.2E-44 T 13-10-2018 IPR000160 GGDEF domain Thivi_1274 0af945269cb8b29acda9b387548378b3 555 SUPERFAMILY SSF55073 399 553 4.08E-48 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1274 0af945269cb8b29acda9b387548378b3 555 SMART SM00267 384 554 1.6E-53 T 13-10-2018 IPR000160 GGDEF domain Thivi_1274 0af945269cb8b29acda9b387548378b3 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 549 9.1E-42 T 13-10-2018 IPR000160 GGDEF domain Thivi_1274 0af945269cb8b29acda9b387548378b3 555 Gene3D G3DSA:3.30.70.270 389 554 4.6E-54 T 13-10-2018 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 159 8.2E-47 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 PIRSF PIRSF001467 1 162 1.0E-27 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.4E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.4E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 116 131 1.4E-11 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 SUPERFAMILY SSF50891 2 161 5.55E-58 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Thivi_2093 2fd0773bd78bacf3ecf3b11711079e70 162 Gene3D G3DSA:2.40.100.10 1 161 2.9E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Thivi_2048 ba88f81b18fbbd51e1e1588ad522cd2f 307 SMART SM00901 37 191 2.0E-22 T 13-10-2018 IPR014966 FRG domain Thivi_2048 ba88f81b18fbbd51e1e1588ad522cd2f 307 Pfam PF08867 FRG domain 41 175 3.9E-19 T 13-10-2018 IPR014966 FRG domain Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 SUPERFAMILY SSF51011 591 690 4.68E-17 T 13-10-2018 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Gene3D G3DSA:3.20.20.80 137 583 9.2E-184 T 13-10-2018 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Gene3D G3DSA:2.60.40.1180 589 690 6.1E-16 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 17 108 7.2E-9 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 SUPERFAMILY SSF81296 14 147 4.2E-24 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Pfam PF00128 Alpha amylase, catalytic domain 178 275 1.3E-12 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Pfam PF00128 Alpha amylase, catalytic domain 313 528 3.1E-4 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 687 1.7E-202 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 SMART SM00642 160 569 5.0E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 SUPERFAMILY SSF51445 136 576 1.28E-131 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_4626 bcc564e2a857c108cadbe792c590644c 693 Gene3D G3DSA:2.60.40.10 2 136 3.7E-28 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 SUPERFAMILY SSF46767 93 177 1.44E-27 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 94 175 5.7E-27 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 Gene3D G3DSA:3.30.160.70 1 89 2.6E-5 T 13-10-2018 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 142 148 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 96 177 4.6E-31 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 SUPERFAMILY SSF53155 2 99 9.61E-8 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Thivi_3721 065000f3692334cbcb2f9f022819ac5b 182 Gene3D G3DSA:1.10.10.10 94 179 3.5E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4234 9a09dfcb0e5879cdf1010437d8f36474 200 Gene3D G3DSA:1.10.357.10 2 192 8.0E-47 T 13-10-2018 Thivi_4234 9a09dfcb0e5879cdf1010437d8f36474 200 Pfam PF13305 WHG domain 91 174 2.2E-13 T 13-10-2018 IPR025996 WHG domain Thivi_4234 9a09dfcb0e5879cdf1010437d8f36474 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 1.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Thivi_4234 9a09dfcb0e5879cdf1010437d8f36474 200 SUPERFAMILY SSF46689 4 86 2.31E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4234 9a09dfcb0e5879cdf1010437d8f36474 200 SUPERFAMILY SSF48498 87 196 1.03E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Thivi_1904 ed167596aa085d2870d35b05ad3a53e1 220 Pfam PF01323 DSBA-like thioredoxin domain 55 194 8.2E-9 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Thivi_1904 ed167596aa085d2870d35b05ad3a53e1 220 SUPERFAMILY SSF52833 32 195 2.13E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1904 ed167596aa085d2870d35b05ad3a53e1 220 PIRSF PIRSF001488 9 216 2.5E-39 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Thivi_1904 ed167596aa085d2870d35b05ad3a53e1 220 Gene3D G3DSA:3.40.30.10 31 218 2.5E-40 T 13-10-2018 Thivi_1904 ed167596aa085d2870d35b05ad3a53e1 220 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_4374 7053a30a1ac436487e513a577930a750 200 Pfam PF00239 Resolvase, N terminal domain 3 135 2.5E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_4374 7053a30a1ac436487e513a577930a750 200 Gene3D G3DSA:3.40.50.1390 1 125 1.1E-44 T 13-10-2018 Thivi_4374 7053a30a1ac436487e513a577930a750 200 SMART SM00857 2 136 7.1E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_4374 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_4374 7053a30a1ac436487e513a577930a750 200 SUPERFAMILY SSF53041 3 135 1.18E-43 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_4374 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_4374 7053a30a1ac436487e513a577930a750 200 Pfam PF04967 HTH DNA binding domain 160 184 4.0E-5 T 13-10-2018 IPR007050 Bacterioopsin activator-type, HTH domain Thivi_0196 7053a30a1ac436487e513a577930a750 200 Pfam PF00239 Resolvase, N terminal domain 3 135 2.5E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_0196 7053a30a1ac436487e513a577930a750 200 Gene3D G3DSA:3.40.50.1390 1 125 1.1E-44 T 13-10-2018 Thivi_0196 7053a30a1ac436487e513a577930a750 200 SMART SM00857 2 136 7.1E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_0196 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_0196 7053a30a1ac436487e513a577930a750 200 SUPERFAMILY SSF53041 3 135 1.18E-43 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_0196 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_0196 7053a30a1ac436487e513a577930a750 200 Pfam PF04967 HTH DNA binding domain 160 184 4.0E-5 T 13-10-2018 IPR007050 Bacterioopsin activator-type, HTH domain Thivi_1340 7053a30a1ac436487e513a577930a750 200 Pfam PF00239 Resolvase, N terminal domain 3 135 2.5E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_1340 7053a30a1ac436487e513a577930a750 200 Gene3D G3DSA:3.40.50.1390 1 125 1.1E-44 T 13-10-2018 Thivi_1340 7053a30a1ac436487e513a577930a750 200 SMART SM00857 2 136 7.1E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_1340 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_1340 7053a30a1ac436487e513a577930a750 200 SUPERFAMILY SSF53041 3 135 1.18E-43 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_1340 7053a30a1ac436487e513a577930a750 200 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_1340 7053a30a1ac436487e513a577930a750 200 Pfam PF04967 HTH DNA binding domain 160 184 4.0E-5 T 13-10-2018 IPR007050 Bacterioopsin activator-type, HTH domain Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 SUPERFAMILY SSF56266 11 400 1.83E-137 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 18 403 3.0E-126 T 13-10-2018 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 Gene3D G3DSA:3.60.70.12 6 273 5.5E-91 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 Gene3D G3DSA:3.10.20.340 274 403 1.1E-43 T 13-10-2018 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 403 4.2E-125 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 Pfam PF01960 ArgJ family 17 403 7.3E-143 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Thivi_2308 824752e2868ad53bd977c23d85e82ce9 403 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 403 153.198 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 SUPERFAMILY SSF47384 247 323 3.92E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 478 4.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 SMART SM00304 191 243 1.9E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 Gene3D G3DSA:3.30.565.10 330 482 4.9E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 SMART SM00387 367 479 2.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 SUPERFAMILY SSF55874 315 479 1.44E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 3.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 3.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 3.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 SMART SM00388 258 326 2.6E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 Gene3D G3DSA:1.10.287.130 191 322 3.5E-18 T 13-10-2018 Thivi_2148 c0e22da6802d7b9936b95117e82175ea 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 324 2.0E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 SUPERFAMILY SSF52738 165 354 6.41E-70 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 Gene3D G3DSA:3.40.50.2300 4 134 7.4E-31 T 13-10-2018 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 SUPERFAMILY SSF52172 4 109 4.27E-28 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 Pfam PF01339 CheB methylesterase 170 348 8.9E-59 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 Pfam PF00072 Response regulator receiver domain 7 109 3.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 Gene3D G3DSA:3.40.50.180 159 356 3.2E-74 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 PIRSF PIRSF000876 2 356 1.3E-130 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 353 40.062 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_4121 44f8d6392d120d62016d0f495f063a1e 364 SMART SM00448 5 120 6.9E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 72.942 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 Gene3D G3DSA:1.20.1090.10 171 358 1.0E-66 T 13-10-2018 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 Gene3D G3DSA:3.40.50.1970 1 170 7.1E-67 T 13-10-2018 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 345 1.2E-119 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 SUPERFAMILY SSF56796 4 354 7.72E-120 T 13-10-2018 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 PIRSF PIRSF001455 10 353 5.7E-108 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Thivi_2859 1ff150a7f10fc80a56a6ffc289be3ce7 359 Pfam PF01761 3-dehydroquinate synthase 65 323 1.8E-110 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Thivi_3246 c9e7b16a84fd061ec70cdcbac22458b7 174 Gene3D G3DSA:3.10.490.10 3 120 3.0E-33 T 13-10-2018 Thivi_3246 c9e7b16a84fd061ec70cdcbac22458b7 174 SUPERFAMILY SSF110857 3 115 5.36E-29 T 13-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Thivi_3246 c9e7b16a84fd061ec70cdcbac22458b7 174 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 113 7.8E-21 T 13-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.956 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 SMART SM00883 2 94 2.2E-61 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 SUPERFAMILY SSF50129 1 95 6.53E-37 T 13-10-2018 IPR011032 GroES-like superfamily Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 PRINTS PR00297 10kDa chaperonin signature 25 46 5.7E-34 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 PRINTS PR00297 10kDa chaperonin signature 3 18 5.7E-34 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 PRINTS PR00297 10kDa chaperonin signature 81 94 5.7E-34 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 PRINTS PR00297 10kDa chaperonin signature 60 72 5.7E-34 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.9E-36 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Thivi_0660 e3dd2a9335b22172a8477e2458113794 96 Gene3D G3DSA:2.30.33.40 1 96 1.4E-39 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Thivi_0329 5670692228b19762beaaa372eeea9222 124 SMART SM00448 3 117 2.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0329 5670692228b19762beaaa372eeea9222 124 Pfam PF00072 Response regulator receiver domain 5 117 2.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0329 5670692228b19762beaaa372eeea9222 124 SUPERFAMILY SSF52172 3 121 7.97E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0329 5670692228b19762beaaa372eeea9222 124 Gene3D G3DSA:3.40.50.12740 1 124 1.3E-35 T 13-10-2018 Thivi_1962 83169f3889b8e2aaf8ef110f49903847 73 Pfam PF09012 FeoC like transcriptional regulator 4 70 2.1E-20 T 13-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC Thivi_1962 83169f3889b8e2aaf8ef110f49903847 73 SUPERFAMILY SSF46785 1 72 1.8E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 185 1.8E-18 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 SMART SM00283 282 543 4.5E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 Pfam PF00672 HAMP domain 214 264 8.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 SUPERFAMILY SSF58104 235 543 2.49E-71 T 13-10-2018 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 Gene3D G3DSA:1.10.287.950 213 544 6.6E-66 T 13-10-2018 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 7.0E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 7.0E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 7.0E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 303 332 7.0E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 SMART SM00304 214 267 1.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1154 0b45094ada89b000a159ad6c593d5cc0 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 509 2.3E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0748 dfcd48ab87dce6b56579e3f9ae429776 169 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 17 163 6.9E-53 T 13-10-2018 IPR008136 CinA, C-terminal Thivi_0748 dfcd48ab87dce6b56579e3f9ae429776 169 Pfam PF02464 Competence-damaged protein 14 164 3.5E-60 T 13-10-2018 IPR008136 CinA, C-terminal Thivi_0748 dfcd48ab87dce6b56579e3f9ae429776 169 Gene3D G3DSA:3.90.950.20 2 166 1.9E-62 T 13-10-2018 IPR036653 CinA-like, C-terminal Thivi_0748 dfcd48ab87dce6b56579e3f9ae429776 169 SUPERFAMILY SSF142433 8 165 6.41E-58 T 13-10-2018 IPR036653 CinA-like, C-terminal Thivi_0712 733ee39822a843968f3ff171a41fb867 544 Gene3D G3DSA:1.10.560.10 8 521 2.9E-241 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Thivi_0712 733ee39822a843968f3ff171a41fb867 544 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 Gene3D G3DSA:3.50.7.10 192 372 2.9E-241 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Thivi_0712 733ee39822a843968f3ff171a41fb867 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 539 41.458 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.0E-259 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 SUPERFAMILY SSF52029 185 376 2.39E-83 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Thivi_0712 733ee39822a843968f3ff171a41fb867 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 Gene3D G3DSA:3.30.260.10 136 410 2.9E-241 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0712 733ee39822a843968f3ff171a41fb867 544 SUPERFAMILY SSF54849 137 203 1.74E-26 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0712 733ee39822a843968f3ff171a41fb867 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.7E-99 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Thivi_0712 733ee39822a843968f3ff171a41fb867 544 SUPERFAMILY SSF48592 7 521 4.35E-77 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 21 283 3.9E-92 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 SUPERFAMILY SSF52540 19 244 1.13E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 Gene3D G3DSA:3.40.50.300 19 261 3.0E-45 T 13-10-2018 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 ProSitePatterns PS00692 NifH/frxC family signature 2. 142 155 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 PRINTS PR00091 Nitrogenase component II signature 47 62 3.9E-26 T 13-10-2018 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 PRINTS PR00091 Nitrogenase component II signature 25 38 3.9E-26 T 13-10-2018 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 PRINTS PR00091 Nitrogenase component II signature 102 116 3.9E-26 T 13-10-2018 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 PRINTS PR00091 Nitrogenase component II signature 141 156 3.9E-26 T 13-10-2018 Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 ProSitePatterns PS00746 NifH/frxC family signature 1. 104 116 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_2011 e359b36b6c5255ac517e56dc4f6428de 317 TIGRFAM TIGR02016 BchX: chlorophyllide reductase iron protein subunit X 20 304 1.8E-123 T 13-10-2018 IPR010246 Chlorophyllide reductase iron protein subunit X GO:0005524|GO:0015979|GO:0016628|GO:0030494|GO:0051539 KEGG: 00860+1.3.7.15|MetaCyc: PWY-5526 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Gene3D G3DSA:3.30.1370.100 484 579 9.1E-58 T 13-10-2018 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Gene3D G3DSA:2.30.42.20 443 621 9.1E-58 T 13-10-2018 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 128 7.6E-10 T 13-10-2018 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Gene3D G3DSA:3.30.230.10 239 350 1.0E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 15 624 28.78 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 SMART SM01340 234 352 4.7E-56 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 SUPERFAMILY SSF118116 437 626 2.48E-60 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Gene3D G3DSA:3.30.565.10 15 230 5.8E-64 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 16 332 4.2E-95 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Pfam PF08676 MutL C terminal dimerisation domain 437 584 3.9E-49 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 107 113 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 SUPERFAMILY SSF55874 15 223 2.36E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 236 351 2.2E-38 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 SUPERFAMILY SSF54211 212 352 1.06E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4001 743f02a58258edea15fb58c5b0ce6334 628 SMART SM00853 441 584 3.3E-54 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 8 181 1.7E-58 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 Gene3D G3DSA:3.40.50.620 2 232 7.5E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 SUPERFAMILY SSF52374 10 402 1.19E-85 T 13-10-2018 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 2.9E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 21 37 2.9E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.9E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 Gene3D G3DSA:1.10.240.10 265 370 7.2E-37 T 13-10-2018 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 8 403 35.095 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 Pfam PF00579 tRNA synthetases class I (W and Y) 248 327 3.9E-9 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 Pfam PF00579 tRNA synthetases class I (W and Y) 7 175 1.5E-51 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1149 858ffe3c07c62017c60f650294b1c098 405 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 SMART SM00670 10 152 2.3E-9 T 13-10-2018 IPR002716 PIN domain Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 Pfam PF13638 PIN domain 12 164 2.4E-39 T 13-10-2018 IPR002716 PIN domain Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 Pfam PF02562 PhoH-like protein 261 458 1.5E-54 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 SUPERFAMILY SSF52540 33 452 7.96E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 Gene3D G3DSA:3.40.50.300 259 470 7.6E-65 T 13-10-2018 Thivi_1200 49cccc1535082c88deadda8f737b1d0d 472 Gene3D G3DSA:3.40.50.1010 6 166 1.9E-22 T 13-10-2018 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 SUPERFAMILY SSF102114 36 234 7.59E-28 T 13-10-2018 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Gene3D G3DSA:3.40.50.300 647 870 4.6E-34 T 13-10-2018 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Pfam PF04055 Radical SAM superfamily 41 183 1.6E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Pfam PF13186 Iron-sulfur cluster-binding domain 346 411 4.5E-7 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Gene3D G3DSA:3.20.20.70 304 420 2.1E-10 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 SUPERFAMILY SSF52540 655 837 9.87E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Gene3D G3DSA:3.20.20.70 35 267 1.9E-26 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4541 de332b4698adfa67ea8979faf82d4879 874 Pfam PF09037 Stf0 sulphotransferase 650 837 2.0E-9 T 13-10-2018 IPR024628 Sulphotransferase Stf0, domain MetaCyc: PWY-7746 Thivi_3322 7549160e504187075deec610a5789db0 777 Pfam PF02824 TGS domain 455 514 5.8E-18 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Thivi_3322 7549160e504187075deec610a5789db0 777 Gene3D G3DSA:3.30.70.260 697 777 5.6E-13 T 13-10-2018 Thivi_3322 7549160e504187075deec610a5789db0 777 Pfam PF13328 HD domain 93 242 1.8E-50 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_3322 7549160e504187075deec610a5789db0 777 Pfam PF04607 Region found in RelA / SpoT proteins 302 412 4.0E-35 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Thivi_3322 7549160e504187075deec610a5789db0 777 SUPERFAMILY SSF81301 247 459 2.13E-57 T 13-10-2018 Thivi_3322 7549160e504187075deec610a5789db0 777 SUPERFAMILY SSF55021 703 773 9.54E-8 T 13-10-2018 Thivi_3322 7549160e504187075deec610a5789db0 777 Gene3D G3DSA:3.10.20.30 448 521 1.9E-28 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_3322 7549160e504187075deec610a5789db0 777 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 93 769 2.9E-224 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Thivi_3322 7549160e504187075deec610a5789db0 777 SMART SM00471 108 220 1.9E-11 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_3322 7549160e504187075deec610a5789db0 777 Pfam PF13291 ACT domain 697 773 6.8E-16 T 13-10-2018 IPR002912 ACT domain Thivi_3322 7549160e504187075deec610a5789db0 777 SUPERFAMILY SSF81271 442 514 6.87E-21 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Thivi_3322 7549160e504187075deec610a5789db0 777 Gene3D G3DSA:3.30.460.10 262 392 5.4E-46 T 13-10-2018 Thivi_3322 7549160e504187075deec610a5789db0 777 SMART SM00954 302 412 2.0E-59 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Thivi_3322 7549160e504187075deec610a5789db0 777 Gene3D G3DSA:1.10.3210.10 65 257 1.7E-74 T 13-10-2018 Thivi_3322 7549160e504187075deec610a5789db0 777 SUPERFAMILY SSF109604 72 256 2.07E-70 T 13-10-2018 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 SUPERFAMILY SSF53681 6 107 4.58E-32 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 Gene3D G3DSA:3.40.50.1860 96 207 7.6E-82 T 13-10-2018 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 215 7.1E-33 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 SUPERFAMILY SSF53681 109 257 8.83E-36 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 250 2.6E-60 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 Gene3D G3DSA:3.40.50.1860 6 244 7.6E-82 T 13-10-2018 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 Hamap MF_00258 Glutamate racemase [murI]. 5 256 34.941 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_3789 7c951d2d57a22fc091d1be79db9ced3c 306 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_4376 d784101182adb5fef8a3e86cabdb7f84 321 SUPERFAMILY SSF52540 26 180 9.0E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4376 d784101182adb5fef8a3e86cabdb7f84 321 Pfam PF13401 AAA domain 39 170 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4376 d784101182adb5fef8a3e86cabdb7f84 321 SMART SM00382 39 186 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4376 d784101182adb5fef8a3e86cabdb7f84 321 Gene3D G3DSA:3.40.50.300 23 187 2.0E-9 T 13-10-2018 Thivi_1342 d784101182adb5fef8a3e86cabdb7f84 321 SUPERFAMILY SSF52540 26 180 9.0E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1342 d784101182adb5fef8a3e86cabdb7f84 321 Pfam PF13401 AAA domain 39 170 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1342 d784101182adb5fef8a3e86cabdb7f84 321 SMART SM00382 39 186 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1342 d784101182adb5fef8a3e86cabdb7f84 321 Gene3D G3DSA:3.40.50.300 23 187 2.0E-9 T 13-10-2018 Thivi_0188 c46cfb12b1344c9ed0fbf3708f39e9f4 516 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.7E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0188 c46cfb12b1344c9ed0fbf3708f39e9f4 516 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0188 c46cfb12b1344c9ed0fbf3708f39e9f4 516 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 39 1.5E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0188 c46cfb12b1344c9ed0fbf3708f39e9f4 516 SUPERFAMILY SSF54523 20 95 5.26E-6 T 13-10-2018 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.0E-25 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-26 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 84 2.0E-21 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.394 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 SUPERFAMILY SSF46992 3 86 1.96E-29 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0475 ed489ecf8696d7fb58a61ae65ce440f6 87 Gene3D G3DSA:1.20.58.110 1 87 4.2E-27 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1095 10d5c6b2aa63c2317d13a95c111e7508 109 Pfam PF03091 CutA1 divalent ion tolerance protein 8 102 4.9E-37 T 13-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Thivi_1095 10d5c6b2aa63c2317d13a95c111e7508 109 SUPERFAMILY SSF54913 4 105 1.56E-38 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_1095 10d5c6b2aa63c2317d13a95c111e7508 109 Gene3D G3DSA:3.30.70.120 1 108 3.7E-40 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 Gene3D G3DSA:3.40.50.620 6 209 1.6E-86 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 330 342 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 SUPERFAMILY SSF52425 4 213 1.31E-52 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 Gene3D G3DSA:1.10.579.10 297 488 3.4E-79 T 13-10-2018 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 PRINTS PR00147 DNA photolyase signature 389 403 3.9E-19 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 PRINTS PR00147 DNA photolyase signature 147 163 3.9E-19 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 PRINTS PR00147 DNA photolyase signature 330 346 3.9E-19 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 PRINTS PR00147 DNA photolyase signature 350 368 3.9E-19 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 Pfam PF00875 DNA photolyase 6 175 5.2E-47 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 Gene3D G3DSA:1.25.40.80 132 290 1.6E-86 T 13-10-2018 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 SUPERFAMILY SSF48173 198 483 5.63E-110 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Thivi_1361 0e07120709abe2f59e754af4263e2e7e 495 Pfam PF03441 FAD binding domain of DNA photolyase 279 479 3.0E-84 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 Hamap MF_01694 Biotin synthase [bioB]. 10 318 41.989 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 SUPERFAMILY SSF102114 10 316 1.96E-91 T 13-10-2018 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 SMART SM00729 48 254 9.3E-35 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 Gene3D G3DSA:3.20.20.70 9 320 2.1E-123 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 PIRSF PIRSF001619 2 324 4.3E-128 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 TIGRFAM TIGR00433 bioB: biotin synthase 20 315 4.4E-120 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 Pfam PF04055 Radical SAM superfamily 55 212 9.2E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 225 315 1.8E-17 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Thivi_1762 093d4180e395695054a9dcb44ea6f917 333 SMART SM00876 225 317 1.7E-41 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Thivi_4155 ab69679c3ed9ef59bccf07c2a7019b0a 300 Gene3D G3DSA:1.10.357.140 32 180 2.4E-43 T 13-10-2018 Thivi_4155 ab69679c3ed9ef59bccf07c2a7019b0a 300 Gene3D G3DSA:1.20.120.1780 181 299 4.8E-12 T 13-10-2018 Thivi_4155 ab69679c3ed9ef59bccf07c2a7019b0a 300 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 15 298 30.12 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Thivi_4155 ab69679c3ed9ef59bccf07c2a7019b0a 300 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 22 297 9.0E-105 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Thivi_4155 ab69679c3ed9ef59bccf07c2a7019b0a 300 Pfam PF01040 UbiA prenyltransferase family 38 281 2.4E-65 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SUPERFAMILY SSF55874 403 585 7.6E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Gene3D G3DSA:2.40.50.180 610 669 2.9E-32 T 13-10-2018 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Gene3D G3DSA:1.10.287.560 341 401 4.2E-8 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SUPERFAMILY SSF47226 3 128 7.98E-32 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SMART SM00073 2 100 1.3E-25 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SUPERFAMILY SSF47384 342 402 2.75E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SMART SM00260 579 715 4.9E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SUPERFAMILY SSF50341 586 715 9.29E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 342 418 3.2E-9 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Pfam PF01584 CheW-like domain 592 716 8.1E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SMART SM00387 446 587 3.7E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 SMART SM01231 341 401 9.1E-13 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 1.5E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 1.5E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 1.5E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 1.5E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Gene3D G3DSA:3.30.565.10 402 586 1.8E-57 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Pfam PF01627 Hpt domain 6 101 2.0E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Gene3D G3DSA:2.30.30.40 587 711 2.9E-32 T 13-10-2018 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Gene3D G3DSA:1.20.120.160 1 129 2.1E-37 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_4114 83c2beb00c0a306da7b7c71ee59888d9 743 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 586 3.1E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2449 e3cca5a788abecd92028c139b6c9199e 482 SUPERFAMILY SSF56436 252 482 2.35E-63 T 13-10-2018 IPR016187 C-type lectin fold Thivi_2449 e3cca5a788abecd92028c139b6c9199e 482 Gene3D G3DSA:3.90.1580.10 244 482 6.7E-61 T 13-10-2018 Thivi_2449 e3cca5a788abecd92028c139b6c9199e 482 Pfam PF03781 Sulfatase-modifying factor enzyme 1 250 480 1.2E-52 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_3589 905c790c353ecb04e673c2f1db93f8da 877 Gene3D G3DSA:3.40.50.300 396 507 1.0E-7 T 13-10-2018 Thivi_3589 905c790c353ecb04e673c2f1db93f8da 877 SUPERFAMILY SSF52540 87 476 5.83E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3589 905c790c353ecb04e673c2f1db93f8da 877 Pfam PF04851 Type III restriction enzyme, res subunit 88 288 8.4E-13 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_0594 f8d63545168d5d46be5dfddd4f48bd7e 378 Pfam PF11726 Inovirus Gp2 171 325 1.5E-13 T 13-10-2018 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 ProSitePatterns PS01143 Ribosomal protein L31 signature. 77 98 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 PRINTS PR01249 Ribosomal protein L31 signature 73 88 9.8E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 PRINTS PR01249 Ribosomal protein L31 signature 44 61 9.8E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 PRINTS PR01249 Ribosomal protein L31 signature 88 106 9.8E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 SUPERFAMILY SSF143800 43 107 3.22E-28 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 Pfam PF01197 Ribosomal protein L31 43 106 7.8E-34 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 Gene3D G3DSA:2.30.170.50 43 108 1.7E-33 T 13-10-2018 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 TIGRFAM TIGR00105 L31: ribosomal protein bL31 43 107 1.6E-33 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2848 c25b776087debc3a0e56603a48ee1c6b 108 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 43 106 29.682 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 Gene3D G3DSA:3.40.366.10 8 286 2.4E-94 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 SUPERFAMILY SSF52151 5 312 7.32E-73 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 Gene3D G3DSA:3.30.70.250 126 198 2.4E-94 T 13-10-2018 Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 Pfam PF00698 Acyl transferase domain 9 282 8.6E-35 T 13-10-2018 IPR014043 Acyl transferase Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 SUPERFAMILY SSF55048 129 198 3.27E-15 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 PIRSF PIRSF000446 1 312 1.0E-108 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 292 2.8E-104 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Thivi_0017 1ab93140181353ab6168dc14ee760d9c 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 303 1.4E-34 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Thivi_2454 1f90ea9bf1312587077ef1b253237165 180 Gene3D G3DSA:2.40.70.10 55 179 3.4E-29 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_2454 1f90ea9bf1312587077ef1b253237165 180 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 63 177 2.0E-27 T 13-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Thivi_2454 1f90ea9bf1312587077ef1b253237165 180 SUPERFAMILY SSF50630 64 168 1.13E-18 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_2454 1f90ea9bf1312587077ef1b253237165 180 Pfam PF13975 gag-polyprotein putative aspartyl protease 77 164 5.7E-22 T 13-10-2018 Thivi_2454 1f90ea9bf1312587077ef1b253237165 180 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 86 97 - T 13-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 Gene3D G3DSA:2.40.50.180 39 154 7.9E-29 T 13-10-2018 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 PIRSF PIRSF002867 1 307 1.0E-101 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 SUPERFAMILY SSF50341 16 159 4.32E-34 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 SUPERFAMILY SSF52172 178 305 9.82E-28 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 Pfam PF00072 Response regulator receiver domain 182 299 1.6E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 SMART SM00260 17 155 4.6E-24 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 Pfam PF01584 CheW-like domain 21 157 2.5E-31 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 SMART SM00448 180 300 2.7E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 Gene3D G3DSA:3.40.50.2300 164 307 8.8E-28 T 13-10-2018 Thivi_0392 adaa57fc5f72e7ae209e6f253001ddfc 307 Gene3D G3DSA:2.30.30.40 24 149 7.9E-29 T 13-10-2018 Thivi_1170 bbfd7b97ca4c2b47393f093d4326869c 310 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 63 68 - T 13-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 Thivi_1170 bbfd7b97ca4c2b47393f093d4326869c 310 Gene3D G3DSA:2.40.10.10 52 282 1.5E-7 T 13-10-2018 Thivi_1170 bbfd7b97ca4c2b47393f093d4326869c 310 Pfam PF13365 Trypsin-like peptidase domain 57 262 1.6E-8 T 13-10-2018 Thivi_1170 bbfd7b97ca4c2b47393f093d4326869c 310 SUPERFAMILY SSF50494 16 270 5.26E-20 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 SUPERFAMILY SSF54862 86 217 1.97E-35 T 13-10-2018 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 94 133 5.1E-15 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 PIRSF PIRSF000309 10 243 3.9E-105 T 13-10-2018 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit MetaCyc: PWY-5382|MetaCyc: PWY-6758 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 SMART SM00929 94 134 1.2E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 Gene3D G3DSA:3.10.20.740 12 134 1.9E-37 T 13-10-2018 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 Gene3D G3DSA:3.30.70.20 136 219 8.6E-23 T 13-10-2018 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 SUPERFAMILY SSF54292 13 85 3.14E-18 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 11 87 3.1E-18 T 13-10-2018 Thivi_1128 c8ff9bf91c9c6ea355125f86c4d21d71 243 Pfam PF00037 4Fe-4S binding domain 197 216 5.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Gene3D G3DSA:1.10.8.60 312 382 5.3E-20 T 13-10-2018 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Pfam PF00072 Response regulator receiver domain 7 115 2.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Gene3D G3DSA:3.40.50.300 125 310 2.4E-68 T 13-10-2018 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 SMART SM00448 5 116 1.8E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Gene3D G3DSA:1.10.10.60 383 464 1.4E-24 T 13-10-2018 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Pfam PF00158 Sigma-54 interaction domain 139 306 6.2E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 4.0E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 4.0E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 461 4.1E-226 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 SMART SM00382 159 302 8.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Gene3D G3DSA:3.40.50.2300 3 124 2.9E-39 T 13-10-2018 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 SUPERFAMILY SSF52540 138 382 6.76E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 SUPERFAMILY SSF52172 4 184 3.13E-45 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 SUPERFAMILY SSF46689 379 464 2.04E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2794 465b84f24da3ca11c6b7dcc83ced90f1 474 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 1.4E-16 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0129 6db9e4d28f6be026c16f835d61e81f85 802 SUPERFAMILY SSF56784 26 244 2.06E-17 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_0129 6db9e4d28f6be026c16f835d61e81f85 802 Gene3D G3DSA:1.10.150.240 42 132 1.4E-16 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_0129 6db9e4d28f6be026c16f835d61e81f85 802 Gene3D G3DSA:3.40.50.1000 31 241 1.4E-16 T 13-10-2018 IPR023214 HAD superfamily Thivi_0261 e119599a729db191fea0dd139a74708e 235 Gene3D G3DSA:2.60.120.10 44 159 2.9E-26 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0261 e119599a729db191fea0dd139a74708e 235 Pfam PF00027 Cyclic nucleotide-binding domain 47 129 7.9E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0261 e119599a729db191fea0dd139a74708e 235 Gene3D G3DSA:1.10.10.10 161 235 3.6E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0261 e119599a729db191fea0dd139a74708e 235 Pfam PF13545 Crp-like helix-turn-helix domain 164 232 2.4E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_0261 e119599a729db191fea0dd139a74708e 235 SUPERFAMILY SSF51206 20 158 2.36E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0261 e119599a729db191fea0dd139a74708e 235 SUPERFAMILY SSF46785 162 233 5.99E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0261 e119599a729db191fea0dd139a74708e 235 SMART SM00100 27 144 5.0E-12 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_2445 e1dd3aed1223f032e1953279408351e5 200 SUPERFAMILY SSF69118 39 74 7.77E-5 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF47384 650 731 1.14E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF00072 Response regulator receiver domain 1071 1186 1.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF00072 Response regulator receiver domain 913 1027 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00387 777 893 1.1E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF55781 363 512 3.61E-10 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF52172 907 1033 2.13E-30 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 208 335 4.1E-13 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 545 638 5.1E-9 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 196 1.5E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 777 891 1.6E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF13185 GAF domain 363 500 1.2E-19 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00091 517 585 110.0 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00091 79 145 4.3E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00091 212 280 1.4 T 13-10-2018 IPR000014 PAS domain Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF55874 719 888 1.44E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF08447 PAS fold 236 325 1.1E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF08447 PAS fold 544 619 1.5E-7 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:1.10.287.130 629 728 1.1E-29 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 836 846 7.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 7.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 832 7.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00388 665 730 1.7E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.30.450.20 67 190 4.6E-13 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:1.20.120.160 1229 1347 1.1E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.40.50.2300 1066 1196 1.8E-40 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF01627 Hpt domain 1251 1325 1.8E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.30.450.20 203 329 2.1E-24 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.30.450.20 506 628 2.0E-15 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 730 1.1E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF55785 542 640 1.26E-15 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF55785 66 190 1.4E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.40.50.12740 910 1065 1.4E-33 T 13-10-2018 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF47226 1212 1344 1.44E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Pfam PF00989 PAS fold 80 185 6.5E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00448 911 1029 4.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00448 1069 1186 2.3E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00086 151 193 23.0 T 13-10-2018 IPR001610 PAC motif Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00086 590 631 0.0022 T 13-10-2018 IPR001610 PAC motif Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SMART SM00086 289 331 1.7E-10 T 13-10-2018 IPR001610 PAC motif Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.30.450.40 361 505 1.5E-6 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF55785 203 329 4.54E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 SUPERFAMILY SSF52172 1068 1197 3.84E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1215 f1f7214f4836306817065717a49f70af 1347 Gene3D G3DSA:3.30.565.10 729 893 4.9E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3638 aca2c68fdd492f706a286e03d7789c88 103 SMART SM00400 38 92 2.8E-5 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_3638 aca2c68fdd492f706a286e03d7789c88 103 SUPERFAMILY SSF57783 38 95 4.7E-15 T 13-10-2018 Thivi_3638 aca2c68fdd492f706a286e03d7789c88 103 Gene3D G3DSA:3.90.580.10 26 99 3.2E-15 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Thivi_3638 aca2c68fdd492f706a286e03d7789c88 103 Pfam PF01807 CHC2 zinc finger 38 95 8.6E-12 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Pfam PF13522 Glutamine amidotransferase domain 66 185 2.5E-19 T 13-10-2018 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Gene3D G3DSA:3.40.50.10490 250 609 8.1E-148 T 13-10-2018 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 SUPERFAMILY SSF53697 246 610 3.3E-113 T 13-10-2018 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 SUPERFAMILY SSF56235 2 235 2.66E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Pfam PF01380 SIS domain 464 592 1.9E-23 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Pfam PF01380 SIS domain 296 418 7.9E-29 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Gene3D G3DSA:3.40.50.10490 448 595 8.1E-148 T 13-10-2018 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.0E-254 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.077 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Thivi_1928 cc835655403cd30e2a144ba9c49218c4 610 Gene3D G3DSA:3.60.20.10 2 242 1.4E-73 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Gene3D G3DSA:2.40.30.10 618 734 4.5E-38 T 13-10-2018 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 SUPERFAMILY SSF52540 436 615 7.9E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 362 944 4.6E-260 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 66 116 7.3E-16 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Gene3D G3DSA:3.30.56.50 2 51 4.6E-11 T 13-10-2018 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 SUPERFAMILY SSF50447 619 701 1.57E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 ProSitePatterns PS01176 Initiation factor 2 signature. 897 919 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 SUPERFAMILY SSF50447 848 943 7.07E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 SUPERFAMILY SSF46955 3 51 6.41E-10 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 SUPERFAMILY SSF52156 724 853 5.89E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Gene3D G3DSA:3.40.50.300 443 617 2.2E-73 T 13-10-2018 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Gene3D G3DSA:3.40.50.10050 740 847 3.6E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 450 605 1.5E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Gene3D G3DSA:2.40.30.10 848 945 1.2E-32 T 13-10-2018 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Pfam PF11987 Translation-initiation factor 2 732 836 2.5E-36 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.0E-7 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 369 417 2.4E-13 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Pfam PF00009 Elongation factor Tu GTP binding domain 451 606 3.7E-35 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_3168 da1b882ecd67ce5031a203b653f57463 946 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 944 17.45 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.3E-108 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 Gene3D G3DSA:3.30.230.20 1 127 1.5E-47 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.172 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 SUPERFAMILY SSF54211 3 125 3.79E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 SUPERFAMILY SSF54211 134 277 2.2E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 297 4.1E-120 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Thivi_2312 ada089a221fd7fcb199336510ef291b0 303 Gene3D G3DSA:3.30.1700.10 128 303 6.6E-69 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 Gene3D G3DSA:3.30.470.20 367 485 4.7E-17 T 13-10-2018 Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 Gene3D G3DSA:3.40.50.20 216 302 1.7E-6 T 13-10-2018 Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 172 3.9E-48 T 13-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 Pfam PF08443 RimK-like ATP-grasp domain 287 368 1.5E-4 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 Gene3D G3DSA:3.30.1490.20 303 366 8.2E-8 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_2214 349733eac1beb57e952110b4f56d2c01 493 SUPERFAMILY SSF56059 277 473 1.12E-37 T 13-10-2018 Thivi_1694 bc735945c0245f9169bc2fdbe8f7f3a8 67 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 61 1.0E-10 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Thivi_1694 bc735945c0245f9169bc2fdbe8f7f3a8 67 Gene3D G3DSA:3.30.920.30 4 64 8.2E-9 T 13-10-2018 IPR038570 HicA superfamily Thivi_1694 bc735945c0245f9169bc2fdbe8f7f3a8 67 SUPERFAMILY SSF54786 1 64 9.81E-10 T 13-10-2018 Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Pfam PF00571 CBS domain 225 278 3.3E-8 T 13-10-2018 IPR000644 CBS domain Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Pfam PF00571 CBS domain 161 211 1.4E-10 T 13-10-2018 IPR000644 CBS domain Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Gene3D G3DSA:3.10.580.10 156 284 5.0E-34 T 13-10-2018 Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 SMART SM00116 232 279 6.9E-4 T 13-10-2018 IPR000644 CBS domain Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 SMART SM00116 168 215 2.7E-9 T 13-10-2018 IPR000644 CBS domain Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Gene3D G3DSA:2.60.120.10 11 149 1.7E-14 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 SUPERFAMILY SSF54631 157 277 3.92E-31 T 13-10-2018 Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 SUPERFAMILY SSF51206 15 147 5.76E-19 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 439 3.0E-47 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Thivi_0246 9d2b1bab7d76917408342665af84e25e 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 477 619 2.7E-48 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SUPERFAMILY SSF55021 706 776 2.12E-5 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 894 298.117 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 PIRSF PIRSF006288 23 894 0.0 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 43 887 1.8E-268 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 Pfam PF01966 HD domain 500 599 1.6E-11 T 13-10-2018 IPR006674 HD domain Thivi_2743 6867e6be3932b63df9b1a62555002783 894 Pfam PF08335 GlnD PII-uridylyltransferase 190 330 3.1E-37 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SUPERFAMILY SSF81301 53 180 1.1E-22 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SUPERFAMILY SSF81593 199 321 6.04E-11 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SUPERFAMILY SSF55021 814 881 1.49E-7 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SUPERFAMILY SSF109604 434 595 1.13E-12 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 Gene3D G3DSA:1.10.3210.10 447 613 1.3E-7 T 13-10-2018 Thivi_2743 6867e6be3932b63df9b1a62555002783 894 SMART SM00471 463 610 1.8E-7 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 164 217 3.7E-8 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 3.6E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 3.6E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 SUPERFAMILY SSF46689 22 92 1.1E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 SUPERFAMILY SSF48498 98 207 1.15E-9 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 Gene3D G3DSA:1.10.10.60 17 70 2.2E-16 T 13-10-2018 Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 Gene3D G3DSA:1.10.357.10 86 221 6.4E-28 T 13-10-2018 Thivi_4362 10a1285125d4530b9e5843ce5f067d83 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 69 5.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Thivi_3114 be0a1868af25f403e1466b8bab1260a9 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.0E-6 T 13-10-2018 Thivi_3114 be0a1868af25f403e1466b8bab1260a9 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 366 7.0E-6 T 13-10-2018 Thivi_3114 be0a1868af25f403e1466b8bab1260a9 427 SUPERFAMILY SSF51905 10 423 6.21E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3114 be0a1868af25f403e1466b8bab1260a9 427 Gene3D G3DSA:3.50.50.60 7 143 8.1E-13 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3114 be0a1868af25f403e1466b8bab1260a9 427 Pfam PF12831 FAD dependent oxidoreductase 11 49 7.2E-12 T 13-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 422 48.351 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 Gene3D G3DSA:3.90.1150.10 12 416 1.9E-164 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 Pfam PF00202 Aminotransferase class-III 27 422 5.6E-127 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 PIRSF PIRSF000521 25 424 2.9E-30 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 423 2.2E-176 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 SUPERFAMILY SSF53383 5 423 1.86E-129 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4332 3cf498469735ad6902c6cfc759a700d2 424 Gene3D G3DSA:3.40.640.10 62 332 1.9E-164 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0307 c40e295b417d9cfe913ebce78926840d 402 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 179 310 2.1E-26 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0307 c40e295b417d9cfe913ebce78926840d 402 SUPERFAMILY SSF58104 112 342 1.7E-37 T 13-10-2018 Thivi_0307 c40e295b417d9cfe913ebce78926840d 402 Gene3D G3DSA:1.10.287.950 104 379 1.2E-35 T 13-10-2018 Thivi_0307 c40e295b417d9cfe913ebce78926840d 402 SMART SM00283 102 347 1.5E-7 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Pfam PF07499 RuvA, C-terminal domain 157 200 1.2E-11 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 29.595 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Gene3D G3DSA:1.10.8.10 155 200 1.0E-12 T 13-10-2018 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Gene3D G3DSA:1.10.150.20 67 139 1.0E-24 T 13-10-2018 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 199 5.1E-50 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 SUPERFAMILY SSF50249 1 63 1.2E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Pfam PF01330 RuvA N terminal domain 1 62 1.1E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 SMART SM00278 108 127 0.01 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 SMART SM00278 73 92 12.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 SUPERFAMILY SSF47781 65 134 1.3E-19 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 2.8E-15 T 13-10-2018 Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 SUPERFAMILY SSF46929 156 199 4.84E-8 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily Thivi_0672 ad950ef3233e4c5f7c780de19ddfbe06 203 Gene3D G3DSA:2.40.50.140 1 66 3.4E-26 T 13-10-2018 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 SUPERFAMILY SSF102114 54 318 8.63E-65 T 13-10-2018 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 Gene3D G3DSA:3.20.20.70 82 294 1.1E-18 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 Pfam PF04055 Radical SAM superfamily 94 255 1.9E-11 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 Hamap MF_00206 Lipoyl synthase [lipA]. 1 324 147.947 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 TIGRFAM TIGR00510 lipA: lipoyl synthase 37 318 9.9E-126 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 PIRSF PIRSF005963 4 324 5.8E-129 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 36 76 1.3E-8 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_1990 21dfe138e39f400e6cc9a57036daca86 324 SMART SM00729 87 296 2.8E-5 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 Hamap MF_00318 Enolase [eno]. 2 410 44.235 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 310 321 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 37 51 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 160 173 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 107 123 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 333 347 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PRINTS PR00148 Enolase signature 362 379 1.2E-46 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 SMART SM01193 4 134 4.7E-88 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 SUPERFAMILY SSF51604 138 422 2.88E-128 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 ProSitePatterns PS00164 Enolase signature. 333 346 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 Gene3D G3DSA:3.30.390.10 1 127 5.7E-53 T 13-10-2018 IPR029017 Enolase-like, N-terminal Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 Pfam PF03952 Enolase, N-terminal domain 4 133 2.5E-56 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 SMART SM01192 138 424 1.9E-221 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 9.5E-205 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 421 4.0E-133 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 PIRSF PIRSF001400 1 424 8.0E-186 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 SUPERFAMILY SSF54826 4 135 4.37E-52 T 13-10-2018 Thivi_3975 f6f4aef562cbadd3a36f62cee60d835d 425 Gene3D G3DSA:3.20.20.120 128 424 1.5E-128 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 PRINTS PR00340 P-II protein signature 52 75 9.3E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 PRINTS PR00340 P-II protein signature 2 17 9.3E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 PRINTS PR00340 P-II protein signature 23 41 9.3E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 PRINTS PR00340 P-II protein signature 83 103 9.3E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 SMART SM00938 4 105 3.6E-63 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 Gene3D G3DSA:3.30.70.120 1 112 1.0E-46 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 PIRSF PIRSF039144 1 112 1.1E-53 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.3E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3469 79bc1e3afbae436379c0ba2afc096e02 112 SUPERFAMILY SSF54913 1 112 7.31E-46 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 Gene3D G3DSA:3.40.50.150 154 455 3.4E-75 T 13-10-2018 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 274 286 7.1E-15 T 13-10-2018 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 177 193 7.1E-15 T 13-10-2018 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 214 7.1E-15 T 13-10-2018 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 343 7.1E-15 T 13-10-2018 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 SUPERFAMILY SSF53335 11 720 1.09E-105 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 Pfam PF12161 HsdM N-terminal domain 13 142 1.0E-12 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 Pfam PF02384 N-6 DNA Methylase 153 430 6.0E-65 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_3907 b5cce7beb981e3187819d5a8d9a3b242 721 Gene3D G3DSA:1.20.1260.30 4 146 5.3E-11 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_2178 293db379e0e970cdcd98337d4570e091 428 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 287 1.5E-22 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 SMART SM00984 314 415 4.8E-32 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 Gene3D G3DSA:3.40.50.720 197 428 2.4E-58 T 13-10-2018 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 415 2.0E-21 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 SUPERFAMILY SSF51735 5 189 3.29E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2178 293db379e0e970cdcd98337d4570e091 428 SUPERFAMILY SSF52413 299 426 4.05E-28 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 406 2.6E-115 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 SUPERFAMILY SSF48179 198 289 9.86E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 PIRSF PIRSF000124 2 428 5.4E-60 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 178 1.4E-29 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 PIRSF PIRSF500136 1 428 4.8E-142 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Thivi_2178 293db379e0e970cdcd98337d4570e091 428 Gene3D G3DSA:3.40.50.720 1 193 5.7E-58 T 13-10-2018 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Gene3D G3DSA:1.10.1420.10 399 515 6.7E-100 T 13-10-2018 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Pfam PF01624 MutS domain I 21 132 3.7E-41 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SMART SM00533 296 603 4.5E-98 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Pfam PF05192 MutS domain III 282 571 6.4E-36 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Gene3D G3DSA:1.10.1420.10 279 571 6.7E-100 T 13-10-2018 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 PIRSF PIRSF037677 10 832 1.1E-145 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Pfam PF00488 MutS domain V 622 809 5.6E-82 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Gene3D G3DSA:3.30.420.110 140 274 3.4E-34 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Pfam PF05188 MutS domain II 141 266 1.3E-24 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SUPERFAMILY SSF55271 14 128 1.18E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SUPERFAMILY SSF53150 127 279 1.15E-41 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SMART SM00534 619 806 4.1E-111 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SUPERFAMILY SSF52540 579 810 1.89E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 SUPERFAMILY SSF48334 280 578 1.14E-88 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Gene3D G3DSA:3.40.1170.10 12 134 1.6E-50 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 700 716 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 20 866 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Gene3D G3DSA:3.40.50.300 582 826 1.7E-94 T 13-10-2018 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Pfam PF05190 MutS family domain IV 440 530 4.4E-29 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Thivi_3738 0439f9c7d4aff8d31d43931df93caf4c 869 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 20 860 25.106 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 SUPERFAMILY SSF56053 83 177 3.45E-35 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 PIRSF PIRSF002162 1 177 1.8E-44 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 Gene3D G3DSA:3.90.930.12 1 82 1.4E-27 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.544 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.4E-73 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 SUPERFAMILY SSF56053 1 82 4.32E-23 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 Pfam PF00347 Ribosomal protein L6 90 164 6.9E-19 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 Pfam PF00347 Ribosomal protein L6 11 80 1.5E-17 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-32 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-32 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-32 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_4216 5bd5bfad00e25d46c956051e512f7b99 177 Gene3D G3DSA:3.90.930.12 83 177 3.2E-38 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF52440 557 675 1.44E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.2E-65 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF52440 1 127 8.34E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1069 13.656 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:3.40.50.20 554 662 1.4E-49 T 13-10-2018 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:3.30.470.20 119 403 8.0E-131 T 13-10-2018 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF56059 128 401 2.65E-109 T 13-10-2018 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 5.9E-73 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.2E-34 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:3.40.50.20 1 116 1.3E-48 T 13-10-2018 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.273 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:3.40.50.1380 938 1069 2.6E-34 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF52335 942 1068 3.92E-37 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF56059 673 932 2.3E-104 T 13-10-2018 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SMART SM00851 956 1042 3.9E-32 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Pfam PF02142 MGS-like domain 957 1042 4.1E-19 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:1.10.1030.10 404 553 8.3E-49 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SUPERFAMILY SSF48108 396 553 2.75E-50 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 SMART SM01096 424 547 5.2E-69 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 547 4.5E-40 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1769 f9a369eb8bfdcaacda4717842c3ad112 1069 Gene3D G3DSA:3.30.470.20 665 935 3.2E-118 T 13-10-2018 Thivi_3746 22d6228595e0214eda08c547b3986843 243 SUPERFAMILY SSF46626 21 207 2.2E-46 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3746 22d6228595e0214eda08c547b3986843 243 Pfam PF02167 Cytochrome C1 family 34 242 3.5E-19 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Thivi_3746 22d6228595e0214eda08c547b3986843 243 PRINTS PR00603 Cytochrome C1 signature 208 223 4.6E-7 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Thivi_3746 22d6228595e0214eda08c547b3986843 243 PRINTS PR00603 Cytochrome C1 signature 42 61 4.6E-7 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Thivi_3746 22d6228595e0214eda08c547b3986843 243 PRINTS PR00603 Cytochrome C1 signature 189 208 4.6E-7 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Thivi_3746 22d6228595e0214eda08c547b3986843 243 Gene3D G3DSA:1.10.760.10 25 208 3.3E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 Gene3D G3DSA:2.40.30.10 289 372 2.0E-24 T 13-10-2018 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 Gene3D G3DSA:3.40.50.620 4 218 3.4E-87 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 SUPERFAMILY SSF52402 11 251 4.41E-58 T 13-10-2018 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 14 368 37.143 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 Gene3D G3DSA:2.30.30.280 220 288 7.5E-25 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 14 367 2.6E-123 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Thivi_4545 7377793c45f5bb4f7e44eff42e8ece84 376 Pfam PF03054 tRNA methyl transferase 14 367 1.5E-128 T 13-10-2018 Thivi_1759 13cb3745be38931090783ed36f731abf 300 Pfam PF01841 Transglutaminase-like superfamily 145 244 6.2E-18 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_1759 13cb3745be38931090783ed36f731abf 300 SUPERFAMILY SSF54001 114 271 4.03E-39 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_1759 13cb3745be38931090783ed36f731abf 300 Gene3D G3DSA:3.10.620.30 106 282 9.3E-45 T 13-10-2018 Thivi_1759 13cb3745be38931090783ed36f731abf 300 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 4 82 2.9E-25 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Thivi_1759 13cb3745be38931090783ed36f731abf 300 SMART SM00460 176 246 1.6E-17 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_4192 7182ed456dd7b20624ccdd2c4bcf6158 175 Gene3D G3DSA:3.30.70.1730 6 171 5.8E-32 T 13-10-2018 Thivi_4192 7182ed456dd7b20624ccdd2c4bcf6158 175 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4192 7182ed456dd7b20624ccdd2c4bcf6158 175 SUPERFAMILY SSF160369 4 170 2.22E-50 T 13-10-2018 Thivi_4192 7182ed456dd7b20624ccdd2c4bcf6158 175 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.479 T 13-10-2018 IPR022973 Ribosomal protein L10 Thivi_4192 7182ed456dd7b20624ccdd2c4bcf6158 175 Pfam PF00466 Ribosomal protein L10 6 101 1.2E-24 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Gene3D G3DSA:1.20.120.160 1 124 1.2E-30 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SUPERFAMILY SSF47384 514 582 2.16E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SUPERFAMILY SSF55874 585 767 6.42E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SMART SM00073 1 98 3.2E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 629 768 1.4E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SUPERFAMILY SSF47226 4 110 4.71E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SMART SM00260 761 902 1.4E-15 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Gene3D G3DSA:3.30.565.10 582 768 2.3E-54 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Gene3D G3DSA:1.10.287.560 513 581 1.4E-12 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SMART SM00387 626 769 8.5E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SMART SM01231 513 581 7.1E-14 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 SUPERFAMILY SSF50341 768 902 7.59E-24 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Gene3D G3DSA:2.30.30.40 769 897 4.4E-26 T 13-10-2018 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Gene3D G3DSA:2.40.50.180 792 857 4.4E-26 T 13-10-2018 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 766 7.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 685 7.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 PRINTS PR00344 Bacterial sensor protein C-terminal signature 729 747 7.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Pfam PF01584 CheW-like domain 774 902 8.6E-16 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 514 580 8.8E-15 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0327 b03b0a1d4fda939a3b76bfcfd49d3ab4 902 Pfam PF01627 Hpt domain 4 92 1.5E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1415 ee46a6288e32d7d5637ba1ac6df1bd73 184 SUPERFAMILY SSF46955 6 104 3.55E-24 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_1415 ee46a6288e32d7d5637ba1ac6df1bd73 184 Pfam PF13411 MerR HTH family regulatory protein 7 74 4.2E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1415 ee46a6288e32d7d5637ba1ac6df1bd73 184 SMART SM00422 6 75 3.8E-24 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1415 ee46a6288e32d7d5637ba1ac6df1bd73 184 Gene3D G3DSA:1.10.1660.10 1 111 4.1E-26 T 13-10-2018 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SMART SM00387 601 720 6.7E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 717 8.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 8.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 680 8.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 666 8.9E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SUPERFAMILY SSF47384 486 558 5.1E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Gene3D G3DSA:3.30.450.20 360 480 2.5E-12 T 13-10-2018 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SUPERFAMILY SSF55785 358 480 4.82E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Gene3D G3DSA:1.20.1480.50 272 359 1.6E-10 T 13-10-2018 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Pfam PF00672 HAMP domain 301 350 2.3E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 PIRSF PIRSF037532 1 723 2.0E-205 T 13-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Gene3D G3DSA:3.30.565.10 562 728 4.7E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Gene3D G3DSA:1.10.287.130 481 559 5.5E-12 T 13-10-2018 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SMART SM00304 301 354 3.0E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SUPERFAMILY SSF158472 301 351 1.57E-8 T 13-10-2018 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SUPERFAMILY SSF55874 569 717 1.83E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 SMART SM00388 490 562 1.9E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 601 717 3.3E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3194 4ee86d1385db3fd72a9c5ff9c7639e5a 735 Pfam PF00512 His Kinase A (phospho-acceptor) domain 491 558 1.1E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 PRINTS PR00502 NUDIX hydrolase family signature 70 84 2.7E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 PRINTS PR00502 NUDIX hydrolase family signature 84 99 2.7E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 ProSitePatterns PS00893 Nudix box signature. 75 96 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 Pfam PF00293 NUDIX domain 42 150 3.8E-20 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 SUPERFAMILY SSF55811 5 171 2.84E-47 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_0293 684008f37f5d72a44958f61156e87ebe 188 Gene3D G3DSA:3.90.79.10 3 184 6.2E-56 T 13-10-2018 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 SUPERFAMILY SSF53187 3 374 1.01E-68 T 13-10-2018 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 SUPERFAMILY SSF55031 179 288 1.41E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 Gene3D G3DSA:3.40.630.10 7 362 6.8E-131 T 13-10-2018 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 Pfam PF01546 Peptidase family M20/M25/M40 62 371 5.2E-44 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 Pfam PF07687 Peptidase dimerisation domain 175 278 6.2E-20 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 Gene3D G3DSA:3.30.70.360 179 292 6.8E-131 T 13-10-2018 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 3.6E-164 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Thivi_2611 1d3ab38f5fc1073407530f491000c387 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 52.755 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 380 5.4E-11 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 2.1E-219 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 SUPERFAMILY SSF53623 97 309 3.27E-49 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 60.45 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 SUPERFAMILY SSF53244 310 448 7.72E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Gene3D G3DSA:3.40.50.720 1 90 6.6E-34 T 13-10-2018 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Pfam PF01225 Mur ligase family, catalytic domain 2 99 8.1E-16 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Gene3D G3DSA:3.40.1190.10 91 313 7.3E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Pfam PF08245 Mur ligase middle domain 108 291 1.7E-15 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 SUPERFAMILY SSF51984 1 89 3.4E-21 T 13-10-2018 Thivi_3616 cb9923086fe493803ccac2bc13390f6b 455 Gene3D G3DSA:3.90.190.20 314 449 4.3E-29 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 Pfam PF00682 HMGL-like 3 267 2.8E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 SUPERFAMILY SSF51230 529 604 5.89E-21 T 13-10-2018 IPR011053 Single hybrid motif Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 601 3.5E-263 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 Gene3D G3DSA:3.20.20.70 1 455 1.1E-174 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 Gene3D G3DSA:2.40.50.100 529 606 2.6E-24 T 13-10-2018 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 Pfam PF02436 Conserved carboxylase domain 291 478 3.3E-55 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 SUPERFAMILY SSF51569 2 300 1.14E-92 T 13-10-2018 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 SUPERFAMILY SSF89000 296 450 3.77E-49 T 13-10-2018 Thivi_0052 2632355ed8deccf8c738e947a0b86980 609 Pfam PF00364 Biotin-requiring enzyme 539 604 4.4E-16 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 SMART SM00155 397 424 1.3E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 SMART SM00155 221 248 0.023 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 SUPERFAMILY SSF56024 274 466 1.66E-38 T 13-10-2018 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 SUPERFAMILY SSF56024 74 313 8.07E-42 T 13-10-2018 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 59 2.9E-9 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 Gene3D G3DSA:3.30.870.10 113 296 2.4E-34 T 13-10-2018 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 10 484 3.3E-103 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 Gene3D G3DSA:3.30.870.10 305 481 4.8E-30 T 13-10-2018 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 Pfam PF13091 PLD-like domain 134 268 8.7E-10 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Thivi_2219 2f8aa11952910c08903ec155ab70732a 484 Pfam PF13091 PLD-like domain 327 448 3.4E-23 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 SUPERFAMILY SSF53633 8 297 2.75E-94 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 Hamap MF_00082 Acetylglutamate kinase [argB]. 27 290 50.567 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 Pfam PF00696 Amino acid kinase family 28 274 3.7E-44 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 1.6E-77 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 PIRSF PIRSF000728 13 297 1.1E-109 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 9.5E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 9.5E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 9.5E-10 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Thivi_2715 46a9a59216119f78de958f93d4e4cf20 298 Gene3D G3DSA:3.40.1160.10 3 297 2.0E-101 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Gene3D G3DSA:3.40.50.2300 726 859 1.5E-26 T 13-10-2018 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 448 1.1E-39 T 13-10-2018 IPR000160 GGDEF domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Gene3D G3DSA:3.30.450.20 182 292 1.2E-19 T 13-10-2018 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Pfam PF00072 Response regulator receiver domain 735 844 2.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Pfam PF00072 Response regulator receiver domain 6 110 4.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SMART SM00052 464 710 7.9E-127 T 13-10-2018 IPR001633 EAL domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SUPERFAMILY SSF141868 469 716 5.62E-95 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SMART SM00267 283 454 6.5E-49 T 13-10-2018 IPR000160 GGDEF domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 165 290 7.3E-17 T 13-10-2018 IPR000014 PAS domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Gene3D G3DSA:3.20.20.450 468 717 2.2E-107 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Pfam PF00563 EAL domain 472 705 8.6E-75 T 13-10-2018 IPR001633 EAL domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SMART SM00448 732 844 5.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SMART SM00448 3 117 1.6E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Pfam PF00989 PAS fold 166 280 9.8E-14 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SUPERFAMILY SSF52172 4 161 1.57E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SMART SM00091 164 230 6.0E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 449 2.3E-30 T 13-10-2018 IPR000160 GGDEF domain Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Gene3D G3DSA:3.30.70.270 293 467 1.9E-50 T 13-10-2018 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SUPERFAMILY SSF52172 731 856 1.71E-28 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 Gene3D G3DSA:3.40.50.12740 1 181 3.6E-45 T 13-10-2018 Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SUPERFAMILY SSF55073 299 455 7.85E-40 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1830 99fdd929e70d3ed13b61ff95d8f51b90 873 SUPERFAMILY SSF55785 175 292 3.84E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Gene3D G3DSA:3.30.365.10 580 731 1.6E-33 T 13-10-2018 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 333 566 1.5E-33 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 64 192 3.8E-11 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 601 683 4.8E-15 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Gene3D G3DSA:3.30.365.10 336 563 1.1E-62 T 13-10-2018 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 PIRSF PIRSF036389 1 731 2.9E-248 T 13-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 SUPERFAMILY SSF56003 332 728 3.66E-112 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Gene3D G3DSA:3.30.365.10 59 197 3.0E-20 T 13-10-2018 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 SMART SM01008 230 308 3.0E-17 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Gene3D G3DSA:3.90.1170.50 199 283 8.1E-13 T 13-10-2018 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 Gene3D G3DSA:3.30.365.10 360 451 1.1E-62 T 13-10-2018 Thivi_2770 824ed3eb44db2256a7140bdd6eb222db 732 SUPERFAMILY SSF56003 54 261 6.63E-40 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 Pfam PF00155 Aminotransferase class I and II 38 387 4.3E-64 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 203 226 5.1E-11 T 13-10-2018 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 98 118 5.1E-11 T 13-10-2018 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 167 191 5.1E-11 T 13-10-2018 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 120 141 5.1E-11 T 13-10-2018 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 SUPERFAMILY SSF53383 1 391 1.16E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 Gene3D G3DSA:3.40.640.10 8 393 8.1E-126 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_4005 d4620833f38324fd9360a9114a3b9f7f 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 Pfam PF03150 Di-haem cytochrome c peroxidase 53 202 1.1E-52 T 13-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 SUPERFAMILY SSF46626 189 344 2.95E-38 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 Gene3D G3DSA:1.10.760.10 49 327 1.3E-113 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 SUPERFAMILY SSF46626 34 190 6.12E-56 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 Gene3D G3DSA:1.10.760.10 189 326 1.3E-113 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 PIRSF PIRSF000294 1 347 6.3E-148 T 13-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 Thivi_0218 cc9501dd63e0e8dc269d16828c430dc3 347 Pfam PF00034 Cytochrome c 210 323 5.6E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2284 9598a5c0b2e9f921d5c0b2758fb81f35 344 Pfam PF06996 Type VI secretion, TssG 22 322 3.4E-113 T 13-10-2018 IPR010732 Type VI secretion, TssG-like Thivi_2284 9598a5c0b2e9f921d5c0b2758fb81f35 344 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 22 322 8.2E-109 T 13-10-2018 IPR010732 Type VI secretion, TssG-like Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 847 912 1.3E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF55874 901 1069 5.11E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF00072 Response regulator receiver domain 1103 1213 1.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF13426 PAS domain 587 685 7.0E-13 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:3.40.50.2300 1097 1227 4.6E-41 T 13-10-2018 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:1.10.287.130 829 910 1.2E-26 T 13-10-2018 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:3.30.450.20 704 828 7.3E-22 T 13-10-2018 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF01627 Hpt domain 1271 1353 1.0E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF47384 834 913 4.32E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00388 847 912 1.3E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:3.30.565.10 911 1074 2.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 452 571 6.0E-17 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 713 832 4.2E-12 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 574 693 2.6E-25 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:3.30.450.20 436 575 2.7E-24 T 13-10-2018 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF52172 1100 1219 1.71E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00448 1101 1214 6.2E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF55785 587 694 1.15E-23 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00086 646 686 8.0E-4 T 13-10-2018 IPR001610 PAC motif Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00086 521 564 62.0 T 13-10-2018 IPR001610 PAC motif Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:3.30.450.20 580 703 2.8E-25 T 13-10-2018 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF55785 439 562 4.71E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00091 576 642 2.9E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00091 716 782 1.0E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00091 451 517 2.4E-8 T 13-10-2018 IPR000014 PAS domain Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF08448 PAS fold 458 563 1.2E-22 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF08448 PAS fold 723 825 2.2E-18 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Gene3D G3DSA:1.20.120.160 1249 1360 6.9E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF55785 707 825 1.12E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SMART SM00387 958 1074 3.7E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1017 1027 1.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1058 1071 1.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 999 1013 1.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1034 1052 1.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 958 1072 5.8E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1009 e5feea6866b2dee496174b74fa4c2ead 1438 SUPERFAMILY SSF47226 1260 1363 7.07E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 Pfam PF03796 DnaB-like helicase C terminal domain 201 456 2.3E-117 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 Gene3D G3DSA:3.40.50.300 184 460 8.9E-108 T 13-10-2018 Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 Gene3D G3DSA:1.10.860.10 16 182 4.7E-53 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 SUPERFAMILY SSF52540 199 449 1.47E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 23 457 1.9E-176 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 SUPERFAMILY SSF48024 21 132 2.48E-35 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 SMART SM00382 218 416 4.2E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1181 b97f7fba228c346b8c5c15b7d2cf325f 467 Pfam PF00772 DnaB-like helicase N terminal domain 23 124 2.8E-31 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Thivi_0496 4866db2976c2230451db2f247641fda7 149 Gene3D G3DSA:3.40.50.12280 2 149 6.2E-51 T 13-10-2018 Thivi_0496 4866db2976c2230451db2f247641fda7 149 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 18 128 4.2E-29 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0496 4866db2976c2230451db2f247641fda7 149 SUPERFAMILY SSF56770 6 136 1.44E-52 T 13-10-2018 Thivi_0682 22ae6002623d101f91d9811339f5c2ca 90 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 3.4E-24 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Thivi_0682 22ae6002623d101f91d9811339f5c2ca 90 SUPERFAMILY SSF54928 2 88 1.75E-31 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Thivi_0682 22ae6002623d101f91d9811339f5c2ca 90 SMART SM00360 2 75 1.7E-27 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Thivi_0682 22ae6002623d101f91d9811339f5c2ca 90 Gene3D G3DSA:3.30.70.330 1 87 1.0E-29 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_0902 941dff94ef3d4335a5fd71a6f265c8e8 325 SUPERFAMILY SSF161098 106 306 1.57E-10 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0902 941dff94ef3d4335a5fd71a6f265c8e8 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 153 323 5.9E-29 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0902 941dff94ef3d4335a5fd71a6f265c8e8 325 Gene3D G3DSA:1.10.3720.10 105 318 2.5E-15 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 SUPERFAMILY SSF53335 151 575 1.37E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 448 454 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 328 342 1.9E-10 T 13-10-2018 Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 445 457 1.9E-10 T 13-10-2018 Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 313 1.9E-10 T 13-10-2018 Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 Gene3D G3DSA:3.40.50.150 275 604 1.8E-35 T 13-10-2018 Thivi_1525 ff621ac6b72e6edea69eeee1df5ee071 1004 Pfam PF02384 N-6 DNA Methylase 276 568 3.5E-17 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_3070 803b4d313fb448c924588a96232233a9 155 SUPERFAMILY SSF52821 11 128 1.31E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3070 803b4d313fb448c924588a96232233a9 155 Gene3D G3DSA:3.40.250.10 1 128 7.4E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3070 803b4d313fb448c924588a96232233a9 155 Pfam PF00581 Rhodanese-like domain 22 119 2.3E-14 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3070 803b4d313fb448c924588a96232233a9 155 SMART SM00450 19 124 8.6E-22 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3047 80fceda6f97f9f7af315bffbdb9a75b5 437 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 195 434 3.5E-62 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Thivi_3047 80fceda6f97f9f7af315bffbdb9a75b5 437 Pfam PF11812 Domain of unknown function (DUF3333) 22 170 4.8E-58 T 13-10-2018 IPR024573 Domain of unknown function DUF3333 Thivi_3047 80fceda6f97f9f7af315bffbdb9a75b5 437 SUPERFAMILY SSF161098 213 430 3.79E-38 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3047 80fceda6f97f9f7af315bffbdb9a75b5 437 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 235 433 1.1E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_3047 80fceda6f97f9f7af315bffbdb9a75b5 437 Gene3D G3DSA:1.10.3720.10 212 436 4.7E-35 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0796 a0b68605f7f833bc536bc1f858ee6073 1002 Pfam PF01564 Spermine/spermidine synthase domain 537 684 1.2E-14 T 13-10-2018 Thivi_0796 a0b68605f7f833bc536bc1f858ee6073 1002 Gene3D G3DSA:3.40.50.150 531 732 7.0E-34 T 13-10-2018 Thivi_0796 a0b68605f7f833bc536bc1f858ee6073 1002 SUPERFAMILY SSF53335 535 699 4.03E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0796 a0b68605f7f833bc536bc1f858ee6073 1002 Gene3D G3DSA:1.20.1250.20 129 434 1.6E-8 T 13-10-2018 Thivi_0796 a0b68605f7f833bc536bc1f858ee6073 1002 SUPERFAMILY SSF103473 103 432 3.66E-10 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 SUPERFAMILY SSF48239 1371 1627 1.14E-46 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 SMART SM00223 36 105 1.5E-4 T 13-10-2018 IPR000177 Apple domain GO:0005515|GO:0005576|GO:0006508 Reactome: R-HSA-140837 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Pfam PF01835 MG2 domain 605 699 2.5E-19 T 13-10-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Pfam PF00207 Alpha-2-macroglobulin family 1175 1243 1.1E-8 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 SMART SM01360 1168 1257 6.6E-27 T 13-10-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 497 598 1.2E-25 T 13-10-2018 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Gene3D G3DSA:1.50.10.20 1369 1632 1.4E-27 T 13-10-2018 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Pfam PF00024 PAN domain 38 93 9.1E-7 T 13-10-2018 IPR003609 PAN/Apple domain Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 SMART SM01359 960 1107 3.4E-35 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 960 1107 5.8E-18 T 13-10-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 SUPERFAMILY SSF57414 42 88 9.61E-7 T 13-10-2018 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 Gene3D G3DSA:3.50.4.10 39 104 1.1E-9 T 13-10-2018 Thivi_1874 e6ef67bc73fa4513a00d5c617c10d16f 1838 PIRSF PIRSF038980 49 1837 0.0 T 13-10-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 SUPERFAMILY SSF51569 2 301 2.01E-85 T 13-10-2018 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 Pfam PF02436 Conserved carboxylase domain 294 501 1.7E-57 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 593 3.3E-256 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 Gene3D G3DSA:3.20.20.70 1 464 1.9E-167 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 Gene3D G3DSA:2.40.50.100 524 599 1.3E-21 T 13-10-2018 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 SUPERFAMILY SSF51230 524 598 1.44E-20 T 13-10-2018 IPR011053 Single hybrid motif Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 Pfam PF00364 Biotin-requiring enzyme 533 598 3.1E-17 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 SUPERFAMILY SSF89000 299 457 3.77E-50 T 13-10-2018 Thivi_2498 c608105ea2d9ef45681738916766ea2d 599 Pfam PF00682 HMGL-like 9 272 8.8E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_3290 6ce89bfce6195bfdf0e27238c312801f 217 Gene3D G3DSA:1.20.120.1760 12 213 1.4E-25 T 13-10-2018 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 SUPERFAMILY SSF111369 72 314 1.06E-63 T 13-10-2018 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 388 2.6E-80 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 307 1.3E-7 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2799 69348ebc5165ff16970421030eae40f7 400 Gene3D G3DSA:2.40.30.170 70 317 4.1E-93 T 13-10-2018 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 Gene3D G3DSA:1.10.287.470 116 189 4.1E-93 T 13-10-2018 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 Gene3D G3DSA:2.40.50.100 81 224 4.1E-93 T 13-10-2018 Thivi_2799 69348ebc5165ff16970421030eae40f7 400 Gene3D G3DSA:2.40.420.20 318 386 4.1E-93 T 13-10-2018 Thivi_2691 732203658555054f4373207b74f4f1c0 119 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 13-10-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Thivi_2691 732203658555054f4373207b74f4f1c0 119 Gene3D G3DSA:3.30.2320.80 1 114 4.2E-30 T 13-10-2018 Thivi_2691 732203658555054f4373207b74f4f1c0 119 PIRSF PIRSF004761 1 115 3.9E-29 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Thivi_2691 732203658555054f4373207b74f4f1c0 119 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.234 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Thivi_2691 732203658555054f4373207b74f4f1c0 119 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 1.6E-29 T 13-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Thivi_2362 824d823c3a106c77048b54293e2d42db 413 Gene3D G3DSA:1.10.150.130 108 218 3.8E-26 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_2362 824d823c3a106c77048b54293e2d42db 413 Pfam PF00589 Phage integrase family 243 368 1.4E-9 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_2362 824d823c3a106c77048b54293e2d42db 413 Pfam PF13356 Arm DNA-binding domain 13 97 3.5E-19 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Thivi_2362 824d823c3a106c77048b54293e2d42db 413 SUPERFAMILY SSF56349 109 391 1.03E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_2362 824d823c3a106c77048b54293e2d42db 413 Gene3D G3DSA:1.10.443.10 221 391 1.8E-12 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_2362 824d823c3a106c77048b54293e2d42db 413 Gene3D G3DSA:3.30.160.390 11 107 1.3E-38 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Thivi_1156 2e2bf71c916fe421acb20e3799fc8d70 295 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 25 49 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Thivi_1156 2e2bf71c916fe421acb20e3799fc8d70 295 Pfam PF00294 pfkB family carbohydrate kinase 18 280 1.8E-41 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Thivi_1156 2e2bf71c916fe421acb20e3799fc8d70 295 SUPERFAMILY SSF53613 5 280 2.03E-53 T 13-10-2018 IPR029056 Ribokinase-like Thivi_1156 2e2bf71c916fe421acb20e3799fc8d70 295 Gene3D G3DSA:3.40.1190.20 4 284 4.3E-72 T 13-10-2018 IPR029056 Ribokinase-like Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 255 7.5E-40 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 413 7.5E-40 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 378 7.5E-40 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 7.5E-40 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 127 7.5E-40 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 107 426 1.5E-63 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 SUPERFAMILY SSF55424 441 563 8.25E-38 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PIRSF PIRSF000350 30 565 3.5E-87 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 SUPERFAMILY SSF51905 107 479 4.03E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Gene3D G3DSA:2.40.50.100 4 81 1.5E-19 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 107 559 3.3E-150 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Pfam PF00364 Biotin-requiring enzyme 6 77 1.6E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 445 553 2.3E-32 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Gene3D G3DSA:3.50.50.60 252 372 2.4E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 301 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 155 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 377 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 413 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 528 548 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 249 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 441 462 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 107 129 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 506 521 7.7E-70 T 13-10-2018 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Gene3D G3DSA:3.50.50.60 107 431 2.4E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 141 151 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 Gene3D G3DSA:3.30.390.30 444 565 1.6E-41 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 SUPERFAMILY SSF51230 3 94 8.51E-22 T 13-10-2018 IPR011053 Single hybrid motif Thivi_3404 aab067c6486498d23eb6c65d8852d206 570 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Thivi_1472 f01a4c503e194353913669ac51e9d998 441 SUPERFAMILY SSF52540 59 312 1.05E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1472 f01a4c503e194353913669ac51e9d998 441 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 405 1.1E-120 T 13-10-2018 IPR021228 Protein of unknown function DUF2791 Thivi_0119 6426ed145f0b3ee96987fd4fb029cde5 127 Pfam PF08334 Type II secretion system (T2SS), protein G 36 120 1.6E-6 T 13-10-2018 IPR013545 Type II secretion system protein G Thivi_0119 6426ed145f0b3ee96987fd4fb029cde5 127 SUPERFAMILY SSF54523 37 121 2.51E-11 T 13-10-2018 Thivi_0119 6426ed145f0b3ee96987fd4fb029cde5 127 Gene3D G3DSA:3.30.700.10 27 124 2.4E-8 T 13-10-2018 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 Gene3D G3DSA:3.90.1280.10 222 280 1.4E-19 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 Gene3D G3DSA:1.10.287.480 174 221 3.2E-17 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 PIRSF PIRSF005261 1 281 7.9E-76 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 280 28.812 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 SUPERFAMILY SSF118352 221 279 3.4E-17 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 SUPERFAMILY SSF64397 4 228 3.01E-66 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 Gene3D G3DSA:3.55.30.10 1 172 3.5E-61 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Thivi_1146 ee99fa60aa698d75e9de44be28d6f2b1 290 Pfam PF01430 Hsp33 protein 5 269 1.8E-81 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 845 959 1.7E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF01627 Hpt domain 1300 1380 1.7E-10 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF08447 PAS fold 606 689 3.3E-7 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.30.450.20 12 143 4.1E-14 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF13426 PAS domain 289 389 1.5E-7 T 13-10-2018 IPR000014 PAS domain Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:1.20.120.160 1280 1389 5.7E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00387 845 961 7.3E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:1.10.287.130 699 797 3.6E-27 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF01590 GAF domain 425 566 1.7E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF55785 34 141 1.93E-12 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF55781 425 566 2.8E-16 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00448 978 1096 5.8E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00448 1125 1238 4.9E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF52172 1123 1242 2.28E-37 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 396 1.3E-14 T 13-10-2018 IPR000014 PAS domain Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF52172 976 1100 5.55E-26 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.30.565.10 799 964 2.5E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 945 958 6.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 904 914 6.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 939 6.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 886 900 6.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF55874 788 959 8.91E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00065 424 576 1.2E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.30.450.40 388 581 3.5E-16 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF55785 263 388 2.42E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00086 654 696 12.0 T 13-10-2018 IPR001610 PAC motif Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00086 350 390 9.2 T 13-10-2018 IPR001610 PAC motif Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00388 734 799 5.1E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF47384 720 801 5.1E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF47226 1221 1367 1.22E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00073 1289 1385 0.0044 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.40.50.12740 977 1124 2.1E-24 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.40.50.12740 1125 1245 8.9E-43 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.30.450.20 594 651 2.0E-16 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF00072 Response regulator receiver domain 980 1096 5.0E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF00072 Response regulator receiver domain 1127 1237 1.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:2.10.70.100 652 697 1.0E-6 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF08448 PAS fold 32 132 1.1E-11 T 13-10-2018 IPR013656 PAS fold-4 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Gene3D G3DSA:3.30.450.20 264 387 8.0E-23 T 13-10-2018 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 734 798 4.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00091 583 650 0.63 T 13-10-2018 IPR000014 PAS domain Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00091 20 89 12.0 T 13-10-2018 IPR000014 PAS domain Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SMART SM00091 278 345 0.013 T 13-10-2018 IPR000014 PAS domain Thivi_1206 7352f72ae7c3a4ec43f5a88f2d7c20cf 1477 SUPERFAMILY SSF55785 570 694 3.54E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 Gene3D G3DSA:3.40.190.10 35 335 2.3E-98 T 13-10-2018 Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 34 347 3.8E-95 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 Pfam PF12849 PBP superfamily domain 33 319 1.9E-52 T 13-10-2018 IPR024370 PBP domain Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 PIRSF PIRSF002756 9 348 1.0E-96 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 SUPERFAMILY SSF53850 34 347 1.01E-85 T 13-10-2018 Thivi_0973 8b60c2b66a89abc4ca9e293f11aedda9 348 Gene3D G3DSA:3.40.190.10 111 290 2.3E-98 T 13-10-2018 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 253 7.6E-53 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 Gene3D G3DSA:1.10.155.10 1 72 3.0E-19 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 SUPERFAMILY SSF47757 4 73 3.01E-17 T 13-10-2018 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 SUPERFAMILY SSF53335 74 263 2.03E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 SMART SM00138 8 266 9.5E-87 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 Gene3D G3DSA:3.40.50.150 73 266 5.0E-60 T 13-10-2018 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 8.0E-16 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 135 151 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 225 248 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PRINTS PR00996 Glutamate methyltransferase family signature 206 220 7.6E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_4119 c1daa8799996c12c426aa956cc41a7b9 266 PIRSF PIRSF000410 1 266 4.9E-93 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_4090 ab4ee67e6edd850ed25866a5984f7e01 556 Pfam PF03321 GH3 auxin-responsive promoter 24 537 2.1E-114 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.458 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 SUPERFAMILY SSF143034 2 64 8.89E-21 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 Pfam PF01632 Ribosomal protein L35 2 61 1.1E-20 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 Gene3D G3DSA:2.40.50.530 1 64 2.8E-19 T 13-10-2018 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.8E-17 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.8E-17 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.8E-17 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Thivi_1563 b07c2c196219e0133552a7e3cf7e1d42 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.7E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Thivi_1442 afb21ca74b8ae481d2adc032674d8c01 145 Pfam PF01464 Transglycosylase SLT domain 3 118 1.2E-5 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_1442 afb21ca74b8ae481d2adc032674d8c01 145 SUPERFAMILY SSF53955 3 141 2.09E-13 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3594 0bff6c7f03b14c0307f1f889fc313634 138 Pfam PF02566 OsmC-like protein 34 130 5.3E-16 T 13-10-2018 IPR003718 OsmC/Ohr family Thivi_3594 0bff6c7f03b14c0307f1f889fc313634 138 Gene3D G3DSA:2.20.25.10 1 33 4.0E-14 T 13-10-2018 Thivi_3594 0bff6c7f03b14c0307f1f889fc313634 138 Gene3D G3DSA:3.30.300.20 39 137 1.4E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3594 0bff6c7f03b14c0307f1f889fc313634 138 SUPERFAMILY SSF82784 1 136 1.31E-39 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Pfam PF06165 Glycosyltransferase family 36 2121 2360 1.9E-80 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Pfam PF06165 Glycosyltransferase family 36 1609 1855 4.6E-86 T 13-10-2018 IPR010383 Glycosyl hydrolase 94 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 SUPERFAMILY SSF74650 1594 1857 5.02E-86 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 SMART SM01068 2098 2163 1.2E-33 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 SMART SM01068 1585 1646 4.7E-25 T 13-10-2018 IPR009342 Putative carbohydrate binding domain Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:1.50.10.140 1405 1568 1.4E-8 T 13-10-2018 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:2.60.420.10 2402 2879 1.4E-192 T 13-10-2018 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:1.50.10.10 2407 2819 1.4E-192 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:2.70.98.40 2100 2398 9.4E-99 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:2.70.98.40 1591 1889 1.1E-96 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 SUPERFAMILY SSF74650 2098 2362 3.77E-89 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 SUPERFAMILY SSF48208 2378 2892 2.78E-102 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2393 2819 4.4E-120 T 13-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Pfam PF10091 Putative glucoamylase 1348 1556 2.9E-15 T 13-10-2018 IPR019282 Domain of unknown function DUF2329 Thivi_2556 5ef16f375e189eab3f9da1f1880feb7f 2896 Gene3D G3DSA:1.50.10.140 998 1136 7.3E-10 T 13-10-2018 Thivi_4064 27562eb19fa046c037427a8be44c9c7b 384 Pfam PF13439 Glycosyltransferase Family 4 18 181 8.0E-17 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_4064 27562eb19fa046c037427a8be44c9c7b 384 SUPERFAMILY SSF53756 5 379 2.78E-73 T 13-10-2018 Thivi_4064 27562eb19fa046c037427a8be44c9c7b 384 Pfam PF13692 Glycosyl transferases group 1 204 342 1.4E-24 T 13-10-2018 Thivi_4064 27562eb19fa046c037427a8be44c9c7b 384 Gene3D G3DSA:3.40.50.2000 177 361 9.8E-63 T 13-10-2018 Thivi_4064 27562eb19fa046c037427a8be44c9c7b 384 Gene3D G3DSA:3.40.50.2000 10 378 9.8E-63 T 13-10-2018 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 SUPERFAMILY SSF63380 11 126 6.39E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 Pfam PF00175 Oxidoreductase NAD-binding domain 142 251 6.1E-10 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 SUPERFAMILY SSF52343 130 282 1.28E-17 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 44 54 1.8E-15 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 105 114 1.8E-15 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 168 177 1.8E-15 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 1.8E-15 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 160 1.8E-15 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 Gene3D G3DSA:3.40.50.80 128 285 5.5E-22 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 Pfam PF00970 Oxidoreductase FAD-binding domain 16 126 1.9E-4 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Thivi_3187 30c4b3f0f02253881f58e56f4d226843 286 Gene3D G3DSA:2.40.30.10 2 126 9.2E-29 T 13-10-2018 Thivi_2869 3a02d4fad13af9832b5df605ad7b8784 304 SUPERFAMILY SSF158544 112 205 9.68E-25 T 13-10-2018 IPR038072 GspK, central domain superfamily Thivi_2869 3a02d4fad13af9832b5df605ad7b8784 304 PIRSF PIRSF002786 1 256 6.3E-36 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Thivi_2869 3a02d4fad13af9832b5df605ad7b8784 304 Gene3D G3DSA:1.10.40.60 106 207 1.5E-19 T 13-10-2018 IPR038072 GspK, central domain superfamily Thivi_2869 3a02d4fad13af9832b5df605ad7b8784 304 Pfam PF03934 Type II secretion system (T2SS), protein K 30 242 7.3E-31 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Thivi_2375 759e2b9fead18bb9d2097f6f077d1d8b 377 PIRSF PIRSF000390 1 375 9.0E-101 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Thivi_2375 759e2b9fead18bb9d2097f6f077d1d8b 377 Gene3D G3DSA:3.40.640.10 1 242 2.1E-90 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_2375 759e2b9fead18bb9d2097f6f077d1d8b 377 SUPERFAMILY SSF53383 7 371 1.17E-104 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2375 759e2b9fead18bb9d2097f6f077d1d8b 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 368 2.6E-115 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Thivi_2375 759e2b9fead18bb9d2097f6f077d1d8b 377 Gene3D G3DSA:3.90.1150.10 245 372 6.0E-31 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 163 1.2E-6 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 9.4E-23 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 SUPERFAMILY SSF53223 3 102 2.99E-31 T 13-10-2018 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 SUPERFAMILY SSF51735 103 277 1.92E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 Gene3D G3DSA:3.40.50.10860 6 265 1.6E-77 T 13-10-2018 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 275 2.9E-76 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 279 31.662 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Thivi_3088 5232972d98fb46d95f7e71c0cbecef42 279 Gene3D G3DSA:3.40.50.720 117 247 1.6E-77 T 13-10-2018 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SMART SM00448 771 888 1.9E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SMART SM00448 624 740 8.8E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Gene3D G3DSA:3.30.565.10 444 611 3.3E-54 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Gene3D G3DSA:1.10.287.130 343 443 3.8E-29 T 13-10-2018 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SUPERFAMILY SSF55874 434 604 2.36E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 586 9.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 9.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 9.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 605 9.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SMART SM00388 380 445 3.8E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SUPERFAMILY SSF52172 622 752 2.13E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SUPERFAMILY SSF47384 363 446 5.49E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Gene3D G3DSA:3.40.50.12740 623 765 7.2E-36 T 13-10-2018 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Gene3D G3DSA:3.40.50.12740 770 904 7.0E-41 T 13-10-2018 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SMART SM00387 492 608 4.4E-41 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 605 2.0E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 SUPERFAMILY SSF52172 771 900 2.56E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Pfam PF00072 Response regulator receiver domain 626 740 8.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Pfam PF00072 Response regulator receiver domain 773 887 7.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0644 c3dfa095ca755719f8d82fac8a6f84db 907 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 445 2.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 Gene3D G3DSA:2.30.30.30 120 176 3.0E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 SMART SM00739 123 150 1.9E-5 T 13-10-2018 IPR005824 KOW Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 Pfam PF00467 KOW motif 126 156 1.3E-8 T 13-10-2018 IPR005824 KOW Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.8E-18 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.8E-18 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.8E-18 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 Pfam PF02357 Transcription termination factor nusG 3 107 1.6E-25 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 SUPERFAMILY SSF50104 121 176 6.84E-18 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 2.3E-64 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 Gene3D G3DSA:3.30.70.940 1 119 3.7E-45 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 SMART SM00738 2 111 5.3E-44 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.349 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Thivi_4189 7f27c007be19f4d3d3686ee88ab04719 177 SUPERFAMILY SSF82679 3 114 1.7E-38 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Thivi_1355 d27e1153e0be0f1a048972adbcbdcd37 416 Pfam PF01594 AI-2E family transporter 11 339 3.2E-46 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Thivi_2747 133e1949f7508a3d035e05679a500048 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 43.981 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Thivi_2747 133e1949f7508a3d035e05679a500048 240 Gene3D G3DSA:3.40.1160.10 2 238 1.3E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2747 133e1949f7508a3d035e05679a500048 240 Pfam PF00696 Amino acid kinase family 8 216 1.7E-28 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Thivi_2747 133e1949f7508a3d035e05679a500048 240 SUPERFAMILY SSF53633 4 237 7.85E-72 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_2747 133e1949f7508a3d035e05679a500048 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 3.0E-95 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Thivi_2747 133e1949f7508a3d035e05679a500048 240 PIRSF PIRSF005650 1 240 4.1E-87 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.8E-92 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82693 137 332 5.06E-24 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82866 804 1029 4.19E-45 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82714 720 803 4.45E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:1.20.1640.10 9 510 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.70.1430 565 666 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82693 39 132 2.96E-26 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.70.1430 39 815 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82866 298 499 4.58E-51 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1029 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:1.20.1640.10 511 1021 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82714 184 273 7.19E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 SUPERFAMILY SSF82693 563 669 8.89E-27 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Gene3D G3DSA:3.30.70.1440 667 864 0.0 T 13-10-2018 Thivi_2798 fdc55c8f47e0c3cbe9eb06deb21615b8 1047 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 0.002 T 13-10-2018 Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 5.8E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 Pfam PF00106 short chain dehydrogenase 7 198 3.5E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 Gene3D G3DSA:3.40.50.720 1 236 7.6E-73 T 13-10-2018 Thivi_0533 3b8074d1df72e450ef2e4a400bb318ec 237 SUPERFAMILY SSF51735 3 236 7.07E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1876 3de7bc279ea58655853b86eaf73f469e 144 Pfam PF13279 Thioesterase-like superfamily 13 113 1.3E-9 T 13-10-2018 Thivi_1876 3de7bc279ea58655853b86eaf73f469e 144 SUPERFAMILY SSF54637 4 136 4.04E-29 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_1876 3de7bc279ea58655853b86eaf73f469e 144 Gene3D G3DSA:3.10.129.10 2 138 6.5E-30 T 13-10-2018 Thivi_2289 425eec33e69a4da4822c97eae64ced04 499 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 494 7.3E-222 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Thivi_2289 425eec33e69a4da4822c97eae64ced04 499 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 71 494 1.5E-191 T 13-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath Thivi_2610 143a7627df4941b2b84b302b86c67dc3 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 6.8E-29 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Thivi_2610 143a7627df4941b2b84b302b86c67dc3 114 SUPERFAMILY SSF52833 1 113 6.16E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2610 143a7627df4941b2b84b302b86c67dc3 114 Gene3D G3DSA:3.40.30.10 1 113 2.4E-42 T 13-10-2018 Thivi_2610 143a7627df4941b2b84b302b86c67dc3 114 Pfam PF03960 ArsC family 5 111 2.0E-15 T 13-10-2018 IPR006660 Arsenate reductase-like Thivi_1714 319b85d21cfa5c569a8534e435c28869 225 SMART SM00382 29 217 1.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1714 319b85d21cfa5c569a8534e435c28869 225 Pfam PF00005 ABC transporter 21 168 5.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1714 319b85d21cfa5c569a8534e435c28869 225 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1714 319b85d21cfa5c569a8534e435c28869 225 SUPERFAMILY SSF52540 1 220 1.96E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1714 319b85d21cfa5c569a8534e435c28869 225 Gene3D G3DSA:3.40.50.300 1 222 8.6E-63 T 13-10-2018 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Gene3D G3DSA:3.30.450.20 143 207 7.6E-12 T 13-10-2018 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Gene3D G3DSA:3.20.20.450 440 692 1.2E-96 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 420 3.1E-30 T 13-10-2018 IPR000160 GGDEF domain Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SUPERFAMILY SSF55785 156 261 6.63E-5 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SMART SM00267 256 427 2.8E-26 T 13-10-2018 IPR000160 GGDEF domain Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SUPERFAMILY SSF55073 272 424 6.2E-31 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SMART SM00448 12 125 5.7E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Pfam PF00072 Response regulator receiver domain 15 125 8.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SUPERFAMILY SSF52172 14 146 2.42E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Pfam PF00563 EAL domain 445 679 1.9E-72 T 13-10-2018 IPR001633 EAL domain Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SUPERFAMILY SSF141868 444 692 9.02E-87 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Gene3D G3DSA:3.30.70.270 263 428 3.6E-36 T 13-10-2018 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 SMART SM00052 439 684 5.3E-106 T 13-10-2018 IPR001633 EAL domain Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 Gene3D G3DSA:3.40.50.2300 3 142 3.4E-38 T 13-10-2018 Thivi_0648 a552a75bc696610346b96e1b0c36c36f 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 422 1.3E-25 T 13-10-2018 IPR000160 GGDEF domain Thivi_0174 37dd2b3496ae3a27f90c39706776aea3 96 Pfam PF01381 Helix-turn-helix 16 65 8.6E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_0174 37dd2b3496ae3a27f90c39706776aea3 96 Gene3D G3DSA:1.10.260.40 2 96 6.4E-31 T 13-10-2018 Thivi_0174 37dd2b3496ae3a27f90c39706776aea3 96 SUPERFAMILY SSF47413 8 90 3.1E-24 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_0174 37dd2b3496ae3a27f90c39706776aea3 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 80 5.3E-30 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Thivi_0174 37dd2b3496ae3a27f90c39706776aea3 96 SMART SM00530 12 68 1.3E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1730 b8c7492bcc73a78668fb2183ac3d3551 550 Pfam PF03109 ABC1 family 114 231 9.6E-35 T 13-10-2018 IPR004147 UbiB domain Thivi_1730 b8c7492bcc73a78668fb2183ac3d3551 550 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 4 547 50.707 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Thivi_1730 b8c7492bcc73a78668fb2183ac3d3551 550 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 439 1.8E-177 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Thivi_1730 b8c7492bcc73a78668fb2183ac3d3551 550 SUPERFAMILY SSF56112 95 433 1.48E-48 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_1007 71a2708bb2efe6596a06baf91b7d1d16 171 SUPERFAMILY SSF54637 2 169 4.55E-55 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_1007 71a2708bb2efe6596a06baf91b7d1d16 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 170 2.1E-90 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_1007 71a2708bb2efe6596a06baf91b7d1d16 171 Gene3D G3DSA:3.10.129.10 1 171 5.7E-63 T 13-10-2018 Thivi_1007 71a2708bb2efe6596a06baf91b7d1d16 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 50.827 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_1007 71a2708bb2efe6596a06baf91b7d1d16 171 Pfam PF07977 FabA-like domain 28 158 1.0E-47 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 PIRSF PIRSF001549 1 417 1.9E-115 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 SUPERFAMILY SSF55681 5 315 4.18E-103 T 13-10-2018 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 406 1.9E-150 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 417 32.736 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 Pfam PF03129 Anticodon binding domain 327 416 6.6E-9 T 13-10-2018 IPR004154 Anticodon-binding Thivi_2727 760c5d55910ff134e5157d0447f78035 417 Gene3D G3DSA:3.30.930.10 2 321 7.4E-120 T 13-10-2018 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 Gene3D G3DSA:3.40.50.800 324 416 7.4E-20 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Thivi_2727 760c5d55910ff134e5157d0447f78035 417 SUPERFAMILY SSF52954 323 416 6.05E-20 T 13-10-2018 Thivi_2727 760c5d55910ff134e5157d0447f78035 417 Pfam PF13393 Histidyl-tRNA synthetase 10 310 6.6E-50 T 13-10-2018 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SMART SM00387 315 427 6.2E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 4.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 4.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 4.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SUPERFAMILY SSF55785 87 197 2.09E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SMART SM00388 205 271 9.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SUPERFAMILY SSF55874 260 424 2.23E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Gene3D G3DSA:3.30.450.20 85 201 1.2E-7 T 13-10-2018 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SMART SM00091 96 162 1.3E-4 T 13-10-2018 IPR000014 PAS domain Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Gene3D G3DSA:3.30.565.10 279 433 1.2E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Gene3D G3DSA:1.10.287.130 202 271 3.4E-21 T 13-10-2018 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 425 2.7E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 SUPERFAMILY SSF47384 194 270 7.26E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.9E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 423 2.6E-119 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Pfam PF11808 Domain of unknown function (DUF3329) 4 89 3.9E-18 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Thivi_0295 3f4d014ba4e6d68fa522d23959651482 441 Pfam PF13188 PAS domain 96 145 1.6E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2425 169543f9518b3285a51813fe21efa5b8 170 Pfam PF13751 Transposase DDE domain 84 147 2.8E-7 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_2250 714c5af30232bd9ca71420fa911b0457 110 SUPERFAMILY SSF54637 13 95 1.71E-15 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_2250 714c5af30232bd9ca71420fa911b0457 110 Pfam PF07977 FabA-like domain 15 42 1.5E-6 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_2250 714c5af30232bd9ca71420fa911b0457 110 Gene3D G3DSA:3.10.129.10 4 106 3.7E-18 T 13-10-2018 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 Pfam PF00005 ABC transporter 22 191 8.1E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 Gene3D G3DSA:3.40.50.300 1 285 1.8E-82 T 13-10-2018 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.2E-300 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 Gene3D G3DSA:3.40.50.300 286 555 7.7E-72 T 13-10-2018 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 Pfam PF12848 ABC transporter 230 303 6.3E-12 T 13-10-2018 IPR032781 ABC-transporter extension domain Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 Pfam PF00005 ABC transporter 340 473 1.5E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 SMART SM00382 348 524 3.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 SMART SM00382 31 236 2.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 SUPERFAMILY SSF52540 13 244 2.47E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3188 0e8ea0828261359cc746df49b5a9e874 555 SUPERFAMILY SSF52540 301 520 6.28E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 SMART SM01091 340 418 1.8E-17 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 Pfam PF01595 Domain of unknown function DUF21 12 181 1.3E-47 T 13-10-2018 IPR002550 CNNM, transmembrane domain Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 Gene3D G3DSA:3.30.465.10 341 416 1.2E-22 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 Pfam PF00571 CBS domain 275 325 1.9E-5 T 13-10-2018 IPR000644 CBS domain Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 Gene3D G3DSA:3.10.580.10 186 340 3.6E-42 T 13-10-2018 Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 SUPERFAMILY SSF54631 200 343 1.95E-28 T 13-10-2018 Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 SUPERFAMILY SSF56176 338 416 8.72E-17 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2511 8dc8a1223e8276e53defacc217ebf211 424 Pfam PF03471 Transporter associated domain 342 415 5.0E-12 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_1129 f304aba2ce68928fbaf2892a8934f144 180 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 17 163 1.9E-30 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1129 f304aba2ce68928fbaf2892a8934f144 180 SUPERFAMILY SSF56770 6 171 1.31E-38 T 13-10-2018 Thivi_1129 f304aba2ce68928fbaf2892a8934f144 180 Gene3D G3DSA:3.40.50.700 5 178 1.4E-36 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_0047 66dad951d1bef9caa4fa97b77cef3ae1 334 Gene3D G3DSA:3.60.21.10 108 277 2.0E-7 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_0047 66dad951d1bef9caa4fa97b77cef3ae1 334 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 36 272 3.9E-68 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA Thivi_0047 66dad951d1bef9caa4fa97b77cef3ae1 334 SMART SM00854 36 273 4.1E-81 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA Thivi_0047 66dad951d1bef9caa4fa97b77cef3ae1 334 SUPERFAMILY SSF56300 34 272 1.75E-35 T 13-10-2018 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 SMART SM00283 292 553 2.4E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 419 448 1.2E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 417 1.2E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 94 109 1.2E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 Pfam PF00672 HAMP domain 225 274 4.3E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 SUPERFAMILY SSF58104 245 554 3.66E-72 T 13-10-2018 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 518 1.1E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 SMART SM00304 223 277 3.8E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0418 c4ffbb81e4037b22b8ab2d9a8fef5f84 554 Gene3D G3DSA:1.10.287.950 224 554 2.4E-71 T 13-10-2018 Thivi_0200 3c0f826bba2b1a33a41ffcebf54456f2 491 Pfam PF13598 Domain of unknown function (DUF4139) 200 491 1.3E-9 T 13-10-2018 IPR037291 Domain of unknown function DUF4139 Thivi_2854 79adc95b7e0450703e0986ce1ad8751d 205 Gene3D G3DSA:3.30.70.60 94 205 1.3E-37 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Thivi_2854 79adc95b7e0450703e0986ce1ad8751d 205 Pfam PF04350 Pilus assembly protein, PilO 49 200 1.7E-54 T 13-10-2018 IPR007445 Pilus assembly protein, PilO Thivi_2854 79adc95b7e0450703e0986ce1ad8751d 205 Gene3D G3DSA:1.10.287.540 58 93 6.5E-16 T 13-10-2018 Thivi_2854 79adc95b7e0450703e0986ce1ad8751d 205 PIRSF PIRSF016482 1 205 1.9E-64 T 13-10-2018 IPR007445 Pilus assembly protein, PilO Thivi_1829 1009528b9eae3f5bae8b093238f015c5 291 Pfam PF00892 EamA-like transporter family 159 290 1.4E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Thivi_1829 1009528b9eae3f5bae8b093238f015c5 291 Pfam PF00892 EamA-like transporter family 3 134 2.4E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Thivi_1829 1009528b9eae3f5bae8b093238f015c5 291 SUPERFAMILY SSF103481 37 137 5.1E-12 T 13-10-2018 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 Pfam PF01068 ATP dependent DNA ligase domain 71 227 2.5E-7 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 SUPERFAMILY SSF50249 202 306 5.03E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_3115 3786384c2634723be91aa2624f1f783d 309 Gene3D G3DSA:2.40.50.140 227 309 6.8E-10 T 13-10-2018 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 Gene3D G3DSA:3.30.470.30 80 180 6.5E-56 T 13-10-2018 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 Gene3D G3DSA:3.30.1490.70 60 219 6.5E-56 T 13-10-2018 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 SUPERFAMILY SSF56091 58 227 6.56E-40 T 13-10-2018 Thivi_3115 3786384c2634723be91aa2624f1f783d 309 Pfam PF14743 DNA ligase OB-like domain 241 306 4.6E-29 T 13-10-2018 IPR029319 DNA ligase, OB-like domain Thivi_0147 12c442f49fbdaaaa52673b680bca357d 127 Pfam PF01609 Transposase DDE domain 11 76 2.7E-5 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Gene3D G3DSA:3.40.50.300 149 343 1.2E-73 T 13-10-2018 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Gene3D G3DSA:1.10.1780.10 1 148 1.9E-33 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SMART SM00382 598 747 2.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SMART SM00382 199 345 4.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 317 2.0E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Gene3D G3DSA:3.40.50.300 551 765 4.0E-88 T 13-10-2018 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SUPERFAMILY SSF81923 4 141 4.32E-40 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Gene3D G3DSA:3.40.50.300 344 545 1.0E-68 T 13-10-2018 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 767 847 4.9E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SUPERFAMILY SSF52540 160 546 7.58E-97 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Gene3D G3DSA:1.10.8.60 767 861 1.8E-27 T 13-10-2018 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SMART SM01086 767 856 7.1E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 1.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 1.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 1.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 1.4E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 761 1.5E-56 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 SUPERFAMILY SSF52540 547 853 6.04E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 1.9E-12 T 13-10-2018 IPR004176 Clp, N-terminal Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.1E-12 T 13-10-2018 IPR004176 Clp, N-terminal Thivi_1253 c1952f6c4471c90714f5c7b1b0eb2377 866 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 SUPERFAMILY SSF53720 30 430 9.61E-85 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 Gene3D G3DSA:3.40.50.1980 237 353 7.0E-127 T 13-10-2018 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 430 1.6E-157 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 365 383 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 8.6E-85 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 Gene3D G3DSA:3.40.50.1980 33 235 7.0E-127 T 13-10-2018 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 431 40.081 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 Pfam PF00815 Histidinol dehydrogenase 28 430 5.6E-164 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_3226 054c7ce2810334840571c2cd4fceb3ab 434 PIRSF PIRSF000099 5 434 3.4E-155 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Thivi_1527 ab6c845eb286c2f3cbde80cd7e9ec421 538 Gene3D G3DSA:3.40.109.10 29 231 1.1E-56 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Thivi_1527 ab6c845eb286c2f3cbde80cd7e9ec421 538 Gene3D G3DSA:3.40.109.10 278 516 1.0E-40 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Thivi_1527 ab6c845eb286c2f3cbde80cd7e9ec421 538 SUPERFAMILY SSF55469 99 223 1.7E-8 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Thivi_1527 ab6c845eb286c2f3cbde80cd7e9ec421 538 SUPERFAMILY SSF55469 315 530 1.41E-15 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Thivi_1135 0dc370a3d874db039dd4111fa193bcee 191 SUPERFAMILY SSF52833 46 175 4.75E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1135 0dc370a3d874db039dd4111fa193bcee 191 Gene3D G3DSA:3.40.30.10 45 190 2.4E-27 T 13-10-2018 Thivi_1135 0dc370a3d874db039dd4111fa193bcee 191 Pfam PF13098 Thioredoxin-like domain 61 155 5.3E-15 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_3041 a839375dca25d873b2a87792089c51c9 259 Pfam PF02592 Putative vitamin uptake transporter 57 229 2.0E-43 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Thivi_3041 a839375dca25d873b2a87792089c51c9 259 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 53 236 1.0E-34 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Thivi_3041 a839375dca25d873b2a87792089c51c9 259 Hamap MF_02088 Probable queuosine precursor transporter. 4 242 16.796 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 PIRSF PIRSF028103 4 179 2.0E-60 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 Gene3D G3DSA:3.30.70.260 3 87 1.4E-26 T 13-10-2018 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 SUPERFAMILY SSF55021 5 84 7.5E-18 T 13-10-2018 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 Pfam PF13740 ACT domain 7 78 4.5E-24 T 13-10-2018 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 Gene3D G3DSA:3.30.70.260 91 175 2.6E-18 T 13-10-2018 Thivi_1198 6f26988fd1560d65089b58277dd3f5b0 179 SUPERFAMILY SSF55021 91 176 2.8E-18 T 13-10-2018 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 Gene3D G3DSA:3.40.1190.20 8 315 9.2E-110 T 13-10-2018 IPR029056 Ribokinase-like Thivi_2101 95eb024f2b2bc27e353b054451228323 485 SUPERFAMILY SSF52374 345 473 7.88E-23 T 13-10-2018 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 SUPERFAMILY SSF53613 16 317 2.96E-58 T 13-10-2018 IPR029056 Ribokinase-like Thivi_2101 95eb024f2b2bc27e353b054451228323 485 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 335 476 2.5E-60 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 Gene3D G3DSA:3.40.50.620 324 481 1.6E-35 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2101 95eb024f2b2bc27e353b054451228323 485 Hamap MF_01603 Bifunctional protein HldE [hldE]. 8 478 42.738 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 55 78 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 Pfam PF00294 pfkB family carbohydrate kinase 16 311 3.5E-44 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Thivi_2101 95eb024f2b2bc27e353b054451228323 485 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 346 412 1.9E-16 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 Pfam PF01467 Cytidylyltransferase-like 349 439 1.5E-12 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_2101 95eb024f2b2bc27e353b054451228323 485 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 9 318 2.5E-120 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SUPERFAMILY SSF81886 647 931 5.89E-84 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Gene3D G3DSA:3.40.50.300 446 647 3.1E-86 T 13-10-2018 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Gene3D G3DSA:3.40.50.300 23 444 6.1E-170 T 13-10-2018 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Gene3D G3DSA:3.90.1440.10 255 397 6.1E-170 T 13-10-2018 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SUPERFAMILY SSF52540 5 444 5.03E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Pfam PF07516 SecA Wing and Scaffold domain 644 856 1.2E-69 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SUPERFAMILY SSF81767 253 397 2.35E-42 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 ProSitePatterns PS01312 SecA family signature. 529 544 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SMART SM00958 254 387 4.9E-78 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Gene3D G3DSA:3.10.450.50 907 942 4.9E-8 T 13-10-2018 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SUPERFAMILY SSF52540 446 645 5.47E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 101 115 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 117 127 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 442 455 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 368 390 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 405 422 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 PRINTS PR00906 SecA protein signature 63 87 1.3E-58 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Pfam PF07517 SecA DEAD-like domain 7 431 1.4E-127 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Pfam PF02810 SEC-C motif 923 941 3.5E-10 T 13-10-2018 IPR004027 SEC-C motif Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 859 20.097 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 SMART SM00957 6 431 2.3E-298 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Pfam PF01043 SecA preprotein cross-linking domain 258 387 9.8E-37 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 186 845 5.2E-271 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Thivi_2309 ce9b4e2be2194f0f3bc711109a6e6760 943 Gene3D G3DSA:1.10.3060.10 648 860 1.4E-79 T 13-10-2018 Thivi_0574 30b89028b986cda9d62456a2424d3d79 317 SUPERFAMILY SSF52540 13 94 8.13E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0574 30b89028b986cda9d62456a2424d3d79 317 Pfam PF13479 AAA domain 11 207 1.2E-20 T 13-10-2018 Thivi_0574 30b89028b986cda9d62456a2424d3d79 317 SMART SM00382 10 194 3.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0574 30b89028b986cda9d62456a2424d3d79 317 Gene3D G3DSA:3.40.50.300 11 123 6.1E-6 T 13-10-2018 Thivi_2084 24758639d794486d5a53019eb829a460 106 Gene3D G3DSA:2.10.150.10 1 106 2.3E-48 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2084 24758639d794486d5a53019eb829a460 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.5E-45 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2084 24758639d794486d5a53019eb829a460 106 Pfam PF00699 Urease beta subunit 3 99 1.8E-46 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2084 24758639d794486d5a53019eb829a460 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.893 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2084 24758639d794486d5a53019eb829a460 106 SUPERFAMILY SSF51278 1 104 4.19E-50 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 SUPERFAMILY SSF55186 543 702 2.22E-50 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 SUPERFAMILY SSF55681 2 245 2.73E-108 T 13-10-2018 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Pfam PF02272 DHHA1 domain 724 862 3.9E-28 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 SUPERFAMILY SSF50447 444 543 5.65E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Gene3D G3DSA:3.30.54.20 615 668 3.4E-50 T 13-10-2018 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Gene3D G3DSA:2.40.30.130 471 543 4.9E-11 T 13-10-2018 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 SMART SM00863 644 687 1.4E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 845 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 644 687 5.5E-16 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 866 200.446 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 1.3E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 1.3E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.3E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.3E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.3E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Pfam PF01411 tRNA synthetases class II (A) 6 547 2.8E-219 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 SUPERFAMILY SSF101353 246 439 2.35E-59 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Gene3D G3DSA:3.30.980.10 554 688 3.4E-50 T 13-10-2018 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Gene3D G3DSA:3.10.310.40 756 863 9.7E-34 T 13-10-2018 Thivi_0744 b4d6672d0c02b57e4682a0f33125da72 868 Gene3D G3DSA:3.30.930.10 1 242 2.8E-113 T 13-10-2018 Thivi_2377 a11395f40ce3a85b1f8cdf6593eb64e0 328 SUPERFAMILY SSF56954 95 292 6.8E-5 T 13-10-2018 Thivi_2377 a11395f40ce3a85b1f8cdf6593eb64e0 328 Gene3D G3DSA:1.20.1600.10 83 243 4.3E-7 T 13-10-2018 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 Pfam PF01012 Electron transfer flavoprotein domain 8 181 1.0E-42 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 214 297 1.1E-32 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 Gene3D G3DSA:3.40.50.1220 213 339 4.4E-52 T 13-10-2018 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 PIRSF PIRSF000089 4 339 2.5E-106 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 SMART SM00893 8 204 9.0E-46 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 SUPERFAMILY SSF52402 7 194 1.12E-50 T 13-10-2018 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 278 304 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 SUPERFAMILY SSF52467 214 332 1.31E-44 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_0636 c90fee4bd0d1379912b6ca7db4880c23 339 Gene3D G3DSA:3.40.50.620 3 212 2.9E-71 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 4.2E-46 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.7E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.7E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.7E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.1E-28 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.973 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 SUPERFAMILY SSF47729 1 91 8.98E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 SMART SM00411 1 91 4.0E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 Gene3D G3DSA:4.10.520.10 2 38 2.0E-6 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_0300 51c035f4eb8eab02c9700946602c64c3 112 Gene3D G3DSA:4.10.520.10 40 91 2.3E-26 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_2707 8b9dc7ca2cbe62ce4e1785588c87f457 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.7E-28 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Thivi_2707 8b9dc7ca2cbe62ce4e1785588c87f457 89 SUPERFAMILY SSF55229 34 85 7.32E-15 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Thivi_2707 8b9dc7ca2cbe62ce4e1785588c87f457 89 Gene3D G3DSA:3.30.1070.10 1 83 3.6E-28 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Thivi_2707 8b9dc7ca2cbe62ce4e1785588c87f457 89 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 2.7E-25 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Thivi_2707 8b9dc7ca2cbe62ce4e1785588c87f457 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.604 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Thivi_1271 dbd4a9efa36c906d3316037a32049e06 135 Pfam PF13586 Transposase DDE domain 79 129 4.2E-9 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_2587 4577b4f599ce4a365016239d38f81850 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 324 2.1E-27 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Gene3D G3DSA:2.170.190.11 61 152 1.1E-129 T 13-10-2018 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 264 297 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 SUPERFAMILY SSF63882 18 186 4.06E-51 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 SMART SM00852 191 328 2.3E-36 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Gene3D G3DSA:3.40.980.10 186 338 1.1E-129 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Gene3D G3DSA:3.90.105.10 37 185 1.1E-129 T 13-10-2018 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Pfam PF03454 MoeA C-terminal region (domain IV) 342 413 3.7E-17 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Gene3D G3DSA:2.40.340.10 339 408 1.1E-129 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 SUPERFAMILY SSF63867 338 417 4.32E-17 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Pfam PF00994 Probable molybdopterin binding domain 191 325 4.8E-23 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2587 4577b4f599ce4a365016239d38f81850 418 SUPERFAMILY SSF53218 188 331 9.42E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_2587 4577b4f599ce4a365016239d38f81850 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 21 178 1.6E-41 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_1248 1614f20367cd5fbc4b2d0eb49f8cd0c5 237 SMART SM01321 9 125 5.9E-39 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1248 1614f20367cd5fbc4b2d0eb49f8cd0c5 237 Gene3D G3DSA:3.30.70.1290 1 159 6.7E-40 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_1248 1614f20367cd5fbc4b2d0eb49f8cd0c5 237 Pfam PF01797 Transposase IS200 like 11 123 6.3E-16 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1248 1614f20367cd5fbc4b2d0eb49f8cd0c5 237 SUPERFAMILY SSF143422 3 128 1.83E-29 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 Pfam PF01799 [2Fe-2S] binding domain 72 143 6.0E-26 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 SUPERFAMILY SSF47741 72 149 2.88E-29 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 61 5.4E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 Gene3D G3DSA:1.10.150.120 77 153 1.4E-23 T 13-10-2018 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 SUPERFAMILY SSF54292 2 77 4.19E-27 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_2769 f385580c7d7625832af7fe9f1c6de6b0 154 Gene3D G3DSA:3.10.20.30 1 76 4.7E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_0912 f126f8cb82faa771e4a850e51c32b258 315 Pfam PF01420 Type I restriction modification DNA specificity domain 190 297 1.7E-5 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_0912 f126f8cb82faa771e4a850e51c32b258 315 Gene3D G3DSA:3.90.220.20 116 312 1.4E-20 T 13-10-2018 Thivi_0912 f126f8cb82faa771e4a850e51c32b258 315 SUPERFAMILY SSF116734 117 310 4.74E-22 T 13-10-2018 Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 SUPERFAMILY SSF55961 355 492 2.47E-12 T 13-10-2018 Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 Gene3D G3DSA:3.30.530.20 351 505 9.7E-8 T 13-10-2018 IPR023393 START-like domain superfamily Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 SUPERFAMILY SSF51735 30 318 3.89E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 Pfam PF11066 Protein of unknown function (DUF2867) 348 489 5.3E-23 T 13-10-2018 IPR021295 Protein of unknown function DUF2867 Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 Gene3D G3DSA:3.40.50.720 31 324 9.2E-35 T 13-10-2018 Thivi_3158 f91d672ea5a3e1a5344a2e0e775b59b3 515 Pfam PF13460 NAD(P)H-binding 34 141 2.8E-13 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.8E-40 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.055 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 SUPERFAMILY SSF54821 108 206 1.1E-39 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 SMART SM00322 60 125 1.0E-8 T 13-10-2018 IPR004087 K Homology domain GO:0003676 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 SUPERFAMILY SSF54814 2 106 7.06E-37 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 Gene3D G3DSA:3.30.300.20 17 107 1.9E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-96 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 Gene3D G3DSA:3.30.1140.32 108 208 3.8E-44 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4207 5834d7b741d77e68b2cc14c26161613e 225 Pfam PF07650 KH domain 39 111 1.6E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 127 4.6E-16 T 13-10-2018 IPR000014 PAS domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Gene3D G3DSA:3.30.70.270 130 306 3.2E-57 T 13-10-2018 Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Pfam PF00989 PAS fold 10 117 2.0E-12 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Pfam PF13682 Chemoreceptor zinc-binding domain 584 647 9.5E-10 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SMART SM00091 6 72 8.1E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 290 3.5E-49 T 13-10-2018 IPR000160 GGDEF domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SUPERFAMILY SSF141868 310 562 6.54E-79 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SUPERFAMILY SSF55073 136 295 6.36E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SUPERFAMILY SSF55785 14 117 1.06E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SMART SM00052 304 550 1.0E-89 T 13-10-2018 IPR001633 EAL domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 SMART SM00267 120 294 2.6E-61 T 13-10-2018 IPR000160 GGDEF domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Gene3D G3DSA:3.30.450.20 6 129 5.6E-32 T 13-10-2018 Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Gene3D G3DSA:3.20.20.450 307 557 1.8E-85 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 Pfam PF00563 EAL domain 311 545 5.9E-66 T 13-10-2018 IPR001633 EAL domain Thivi_2444 9d3a9470c6a328db68c6bc1ed857ab4a 692 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 293 1.6E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 SUPERFAMILY SSF55424 359 430 4.39E-20 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 Gene3D G3DSA:3.50.50.60 147 286 2.9E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 360 429 2.2E-25 T 13-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 SUPERFAMILY SSF51905 33 159 1.9E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 SUPERFAMILY SSF51905 151 286 2.46E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 Gene3D G3DSA:3.50.50.60 34 351 2.9E-107 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 Gene3D G3DSA:3.90.760.10 358 430 1.2E-27 T 13-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1815 65fa172dddfa0dddd1754bda19e366d8 431 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 34 146 9.3E-12 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 SUPERFAMILY SSF63380 268 362 7.7E-16 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 Gene3D G3DSA:3.40.50.80 363 487 3.0E-10 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 Gene3D G3DSA:2.40.30.10 267 362 8.3E-18 T 13-10-2018 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 Gene3D G3DSA:3.10.20.30 168 258 2.7E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 Pfam PF00970 Oxidoreductase FAD-binding domain 271 361 6.5E-6 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 181 243 6.9E-8 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 365 3.3E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 PRINTS PR00410 Phenol hydroxylase reductase family signature 297 309 3.3E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 PRINTS PR00410 Phenol hydroxylase reductase family signature 455 463 3.3E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 PRINTS PR00410 Phenol hydroxylase reductase family signature 372 391 3.3E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 SUPERFAMILY SSF54292 159 254 2.36E-20 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_0752 e098be67dd07e6755f3b877cb29eaecc 489 SUPERFAMILY SSF52343 352 485 4.19E-18 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 872 883 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF02754 Cysteine-rich domain 1022 1110 8.9E-6 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 SUPERFAMILY SSF46548 790 903 2.44E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF11880 Domain of unknown function (DUF3400) 1239 1282 1.3E-20 T 13-10-2018 IPR021817 Protein of unknown function DUF3400 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Gene3D G3DSA:3.30.70.2740 662 735 1.9E-6 T 13-10-2018 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF02913 FAD linked oxidases, C-terminal domain 591 771 5.5E-20 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF02913 FAD linked oxidases, C-terminal domain 426 547 1.2E-5 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF12447 Protein of unknown function (DUF3683) 8 118 6.1E-50 T 13-10-2018 IPR022153 Protein of unknown function DUF3683 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Gene3D G3DSA:1.10.1060.10 787 905 2.1E-5 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Gene3D G3DSA:3.30.465.40 128 323 1.4E-33 T 13-10-2018 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF13183 4Fe-4S dicluster domain 807 886 6.3E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 SUPERFAMILY SSF55103 665 774 4.91E-27 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 SUPERFAMILY SSF56176 131 398 8.41E-52 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 Pfam PF01565 FAD binding domain 169 314 4.6E-23 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_1258 b9adf73976f858feee47e6441f5d2b4c 1282 SUPERFAMILY SSF55103 401 553 1.96E-13 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Thivi_2759 83aeb3b480414eb112af2f75d7f7788e 193 Pfam PF01351 Ribonuclease HII 9 184 1.6E-37 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain Thivi_2759 83aeb3b480414eb112af2f75d7f7788e 193 Gene3D G3DSA:3.30.420.10 1 193 1.6E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_2759 83aeb3b480414eb112af2f75d7f7788e 193 Hamap MF_00052_B Ribonuclease HII [rnhB]. 7 186 36.94 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 Thivi_2759 83aeb3b480414eb112af2f75d7f7788e 193 SUPERFAMILY SSF53098 5 191 7.59E-67 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2269 2c9607ea2ce03d3071bfe37b40fb541a 163 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 96 1.7E-7 T 13-10-2018 Thivi_0279 ec4b62776a0d662c8c280b7e77d2e25d 53 Pfam PF00556 Antenna complex alpha/beta subunit 13 46 1.2E-9 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0279 ec4b62776a0d662c8c280b7e77d2e25d 53 SUPERFAMILY SSF56918 9 52 1.94E-9 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0279 ec4b62776a0d662c8c280b7e77d2e25d 53 Gene3D G3DSA:4.10.220.20 8 53 3.1E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0282 ec4b62776a0d662c8c280b7e77d2e25d 53 Pfam PF00556 Antenna complex alpha/beta subunit 13 46 1.2E-9 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0282 ec4b62776a0d662c8c280b7e77d2e25d 53 SUPERFAMILY SSF56918 9 52 1.94E-9 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0282 ec4b62776a0d662c8c280b7e77d2e25d 53 Gene3D G3DSA:4.10.220.20 8 53 3.1E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0277 ec4b62776a0d662c8c280b7e77d2e25d 53 Pfam PF00556 Antenna complex alpha/beta subunit 13 46 1.2E-9 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0277 ec4b62776a0d662c8c280b7e77d2e25d 53 SUPERFAMILY SSF56918 9 52 1.94E-9 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0277 ec4b62776a0d662c8c280b7e77d2e25d 53 Gene3D G3DSA:4.10.220.20 8 53 3.1E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 Gene3D G3DSA:3.40.50.150 142 424 1.1E-81 T 13-10-2018 Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 SUPERFAMILY SSF53335 5 513 1.65E-109 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 Pfam PF12161 HsdM N-terminal domain 6 117 8.3E-20 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 Gene3D G3DSA:1.20.1260.30 1 135 9.9E-20 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 Pfam PF02384 N-6 DNA Methylase 140 474 3.3E-82 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 180 1.3E-15 T 13-10-2018 Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 319 1.3E-15 T 13-10-2018 Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 261 273 1.3E-15 T 13-10-2018 Thivi_0587 4692540bafc48ec7ada25fe9b5cb38ff 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 187 201 1.3E-15 T 13-10-2018 Thivi_1124 cdc2e4d0c6bd2109b333f146a97a6733 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 80 2.9E-13 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Thivi_1124 cdc2e4d0c6bd2109b333f146a97a6733 250 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Thivi_1124 cdc2e4d0c6bd2109b333f146a97a6733 250 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 24 184 1.7E-33 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Thivi_1124 cdc2e4d0c6bd2109b333f146a97a6733 250 Gene3D G3DSA:1.20.120.1760 11 153 3.7E-14 T 13-10-2018 Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 298 30.535 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 287 5.5E-86 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 SUPERFAMILY SSF82866 78 295 3.14E-42 T 13-10-2018 Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 Gene3D G3DSA:1.20.1640.10 101 300 5.6E-12 T 13-10-2018 Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 Pfam PF07549 SecD/SecF GG Motif 35 60 3.2E-9 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 PRINTS PR01755 Bacterial translocase SecF protein signature 203 221 1.8E-34 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 PRINTS PR01755 Bacterial translocase SecF protein signature 39 54 1.8E-34 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 PRINTS PR01755 Bacterial translocase SecF protein signature 235 250 1.8E-34 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 PRINTS PR01755 Bacterial translocase SecF protein signature 155 169 1.8E-34 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 111 284 1.3E-57 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3128 3b9ad2a40882455dc4e428ea7c87da05 315 Pfam PF02355 Protein export membrane protein 114 295 3.4E-73 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 SUPERFAMILY SSF111369 52 301 5.75E-74 T 13-10-2018 Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 Gene3D G3DSA:1.10.287.470 99 172 5.1E-100 T 13-10-2018 Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 Gene3D G3DSA:2.40.30.170 51 304 5.1E-100 T 13-10-2018 Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 Gene3D G3DSA:2.40.50.100 64 208 5.1E-100 T 13-10-2018 Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 294 1.2E-11 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 372 2.2E-75 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_2802 b5c992714c3a1389c7e3e487e0efeb5b 397 Gene3D G3DSA:2.40.420.20 305 371 5.1E-100 T 13-10-2018 Thivi_3456 7645ee100ab8ea35c5b27637e93ef0d5 406 Pfam PF12476 Protein of unknown function (DUF3696) 350 387 1.2E-5 T 13-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal Thivi_3456 7645ee100ab8ea35c5b27637e93ef0d5 406 Gene3D G3DSA:3.40.50.300 1 346 3.2E-14 T 13-10-2018 Thivi_3456 7645ee100ab8ea35c5b27637e93ef0d5 406 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 336 2.6E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_3456 7645ee100ab8ea35c5b27637e93ef0d5 406 SUPERFAMILY SSF52540 1 343 4.7E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3456 7645ee100ab8ea35c5b27637e93ef0d5 406 PIRSF PIRSF034888 2 403 1.1E-34 T 13-10-2018 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 Thivi_4570 54131086dd03b8c2c96f63828282d7f2 374 SUPERFAMILY SSF52540 56 250 1.22E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4570 54131086dd03b8c2c96f63828282d7f2 374 Pfam PF00176 SNF2 family N-terminal domain 82 257 4.7E-12 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Thivi_4570 54131086dd03b8c2c96f63828282d7f2 374 SMART SM00487 58 261 1.3E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4570 54131086dd03b8c2c96f63828282d7f2 374 Gene3D G3DSA:3.40.50.10810 58 334 2.1E-57 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_3438 8cc42db31acdab1982d0244f17bf9aea 157 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 110 8.7E-48 T 13-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 Thivi_3438 8cc42db31acdab1982d0244f17bf9aea 157 Pfam PF05233 PHB accumulation regulatory domain 70 108 2.6E-17 T 13-10-2018 IPR007897 PHB accumulation regulatory Thivi_3438 8cc42db31acdab1982d0244f17bf9aea 157 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 8.7E-28 T 13-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 Pfam PF00239 Resolvase, N terminal domain 4 148 3.8E-46 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 SMART SM00857 4 149 2.8E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 Gene3D G3DSA:1.10.10.60 155 193 1.6E-5 T 13-10-2018 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 Pfam PF13384 Homeodomain-like domain 161 192 2.3E-6 T 13-10-2018 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 Gene3D G3DSA:3.40.50.1390 1 154 6.9E-46 T 13-10-2018 Thivi_1616 39e27a8929e055c4eb75f89c1e0a270e 196 SUPERFAMILY SSF53041 3 149 1.44E-39 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SUPERFAMILY SSF55785 77 202 5.8E-23 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SUPERFAMILY SSF141868 520 768 4.45E-65 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 495 1.9E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Gene3D G3DSA:3.20.20.450 516 771 3.2E-76 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Pfam PF08447 PAS fold 242 323 6.2E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 217 338 2.6E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 88 211 2.8E-16 T 13-10-2018 IPR000014 PAS domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Gene3D G3DSA:2.10.70.100 286 334 7.4E-10 T 13-10-2018 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00267 332 504 2.4E-51 T 13-10-2018 IPR000160 GGDEF domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00091 90 155 2.3E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00091 215 283 110.0 T 13-10-2018 IPR000014 PAS domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 496 2.2E-40 T 13-10-2018 IPR000160 GGDEF domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Gene3D G3DSA:3.30.450.20 76 202 1.4E-21 T 13-10-2018 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00052 514 760 6.1E-72 T 13-10-2018 IPR001633 EAL domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SUPERFAMILY SSF55073 348 504 2.83E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00086 162 204 1.2E-4 T 13-10-2018 IPR001610 PAC motif Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SMART SM00086 290 332 1.5E-8 T 13-10-2018 IPR001610 PAC motif Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Gene3D G3DSA:3.30.450.20 213 278 5.5E-12 T 13-10-2018 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Pfam PF00563 EAL domain 520 754 1.3E-57 T 13-10-2018 IPR001633 EAL domain Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Pfam PF00989 PAS fold 92 201 6.5E-11 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 SUPERFAMILY SSF55785 224 335 2.69E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2574 afd804be82eb9c256f7ca2a5c1a37fad 773 Gene3D G3DSA:3.30.70.270 345 514 3.0E-53 T 13-10-2018 Thivi_2255 2634c01165d08139e0db48a2d82ec8fd 265 Gene3D G3DSA:3.40.47.10 14 164 1.8E-6 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2255 2634c01165d08139e0db48a2d82ec8fd 265 SUPERFAMILY SSF53901 3 149 8.83E-11 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2255 2634c01165d08139e0db48a2d82ec8fd 265 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 43 191 9.4E-29 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_2261 1f68bd142af3f7d4a7dd6d06c03ff0d6 226 SUPERFAMILY SSF53098 23 183 1.14E-11 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 SMART SM00382 28 222 2.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 2.2E-112 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 SUPERFAMILY SSF52540 4 236 3.47E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 Gene3D G3DSA:3.40.50.300 2 241 1.1E-67 T 13-10-2018 Thivi_2233 4cf368b08a877d1fc32a30edbb6fa058 241 Pfam PF00005 ABC transporter 19 166 6.0E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 133 2.0E-43 T 13-10-2018 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 Pfam PF01220 Dehydroquinase class II 4 140 1.3E-57 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 153 70.844 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 4.1E-58 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 Gene3D G3DSA:3.40.50.9100 1 150 1.9E-62 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 SUPERFAMILY SSF52304 4 148 1.44E-59 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_1099 9e206505a8f5d33a9534b9d27073afee 153 PIRSF PIRSF001399 1 147 1.5E-56 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Thivi_2495 90837df24d38053aa276b5ced70be170 291 SUPERFAMILY SSF51197 14 285 9.16E-44 T 13-10-2018 Thivi_2495 90837df24d38053aa276b5ced70be170 291 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 78 282 4.2E-15 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Thivi_2495 90837df24d38053aa276b5ced70be170 291 Gene3D G3DSA:3.60.130.10 66 289 1.7E-26 T 13-10-2018 Thivi_0460 9cc68c009e73e5fe2dd19a9533ab1262 268 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 198 5.3E-39 T 13-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 Thivi_0460 9cc68c009e73e5fe2dd19a9533ab1262 268 Gene3D G3DSA:3.30.70.2660 1 264 1.4E-51 T 13-10-2018 Thivi_0460 9cc68c009e73e5fe2dd19a9533ab1262 268 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 256 4.1E-39 T 13-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Thivi_0460 9cc68c009e73e5fe2dd19a9533ab1262 268 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 46 4.7E-5 T 13-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:1.10.287.130 556 641 7.0E-26 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF47384 561 644 3.34E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 742 2.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 746 756 2.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 800 2.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 781 2.0E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF00072 Response regulator receiver domain 826 939 5.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:1.20.120.160 967 1081 6.6E-9 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.30.450.20 438 506 9.4E-19 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.30.565.10 642 803 4.0E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SMART SM00086 517 558 7.9E-8 T 13-10-2018 IPR001610 PAC motif Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF55874 632 799 4.32E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.30.450.20 56 142 2.1E-7 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF55785 283 411 7.15E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF55785 435 556 8.9E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2379 643b255f858d232fce63916f9433aa24 1162 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 466 565 5.0E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2379 643b255f858d232fce63916f9433aa24 1162 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 419 1.2E-8 T 13-10-2018 IPR000014 PAS domain Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.40.50.2300 811 941 5.8E-37 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF47226 923 1050 3.01E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SMART SM00448 824 939 2.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 690 801 2.4E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF01627 Hpt domain 993 1068 5.4E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF00512 His Kinase A (phospho-acceptor) domain 579 643 1.9E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.30.450.20 145 296 2.3E-8 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SUPERFAMILY SSF52172 823 979 1.22E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF08448 PAS fold 311 414 3.6E-11 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF08447 PAS fold 466 552 5.4E-10 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Pfam PF08447 PAS fold 72 124 4.5E-7 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SMART SM00387 690 805 1.4E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:2.10.70.100 513 555 5.6E-10 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 Gene3D G3DSA:3.30.450.20 297 431 4.9E-16 T 13-10-2018 Thivi_2379 643b255f858d232fce63916f9433aa24 1162 SMART SM00388 578 643 4.5E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 Pfam PF01883 Iron-sulfur cluster assembly protein 6 79 2.4E-16 T 13-10-2018 IPR002744 MIP18 family-like Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 SUPERFAMILY SSF117916 1 86 2.45E-15 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 Gene3D G3DSA:3.40.50.300 89 340 6.6E-86 T 13-10-2018 Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 341 38.117 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 Gene3D G3DSA:3.30.300.130 1 88 2.5E-11 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 339 3.4E-104 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Thivi_3038 1c13426cc7b63075808fdbd5f7694de4 363 SUPERFAMILY SSF52540 90 324 5.67E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Pfam PF00072 Response regulator receiver domain 658 768 3.9E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SUPERFAMILY SSF55874 442 615 4.71E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Gene3D G3DSA:3.30.565.10 452 617 2.0E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SMART SM00388 386 453 1.8E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SUPERFAMILY SSF47384 373 454 7.46E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SUPERFAMILY SSF52172 655 775 1.39E-16 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Pfam PF00512 His Kinase A (phospho-acceptor) domain 387 453 1.5E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 613 2.4E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Gene3D G3DSA:3.40.50.2300 654 775 1.4E-14 T 13-10-2018 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SMART SM00448 656 771 0.0021 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 611 7.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 567 7.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 553 7.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 592 7.4E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 SMART SM00387 500 614 3.5E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3690 a87cb6ff80247749404ff24df156a7e3 820 Gene3D G3DSA:1.10.287.130 351 451 1.3E-22 T 13-10-2018 Thivi_2597 64e767434b672db34f04a75825ad8113 83 ProSitePatterns PS00605 ATP synthase c subunit signature. 45 66 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 SUPERFAMILY SSF81333 9 82 9.94E-18 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Thivi_2597 64e767434b672db34f04a75825ad8113 83 Pfam PF00137 ATP synthase subunit C 16 79 3.2E-10 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Thivi_2597 64e767434b672db34f04a75825ad8113 83 Hamap MF_01396 ATP synthase subunit c [atpH]. 15 80 13.804 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 Gene3D G3DSA:1.20.20.10 6 83 4.5E-28 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 PRINTS PR00124 ATP synthase C subunit signature 38 53 3.7E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 PRINTS PR00124 ATP synthase C subunit signature 55 80 3.7E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 PRINTS PR00124 ATP synthase C subunit signature 17 36 3.7E-10 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2597 64e767434b672db34f04a75825ad8113 83 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 26 82 5.2E-27 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Thivi_3518 5b651fc4c50426153bb6a5f43cfacab2 193 Pfam PF11985 Protein of unknown function (DUF3486) 1 189 5.4E-17 T 13-10-2018 IPR021874 Bacteriophage Mu, Gp27 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.8E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.8E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 1.8E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 Gene3D G3DSA:3.40.50.1000 8 213 3.8E-59 T 13-10-2018 IPR023214 HAD superfamily Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 Gene3D G3DSA:1.20.120.1600 20 103 3.8E-59 T 13-10-2018 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 194 3.1E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 100 200 5.3E-12 T 13-10-2018 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 200 6.7E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_3841 9fe4fe475094ac7c5f1945bed751f694 231 SUPERFAMILY SSF56784 6 228 5.46E-40 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_3570 47d88e19c3aa4afb0f85e3b5eefa7bf5 329 Pfam PF08003 Protein of unknown function (DUF1698) 12 327 1.6E-123 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like Thivi_3570 47d88e19c3aa4afb0f85e3b5eefa7bf5 329 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 17 328 50.552 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Thivi_3570 47d88e19c3aa4afb0f85e3b5eefa7bf5 329 SUPERFAMILY SSF53335 91 320 6.48E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3570 47d88e19c3aa4afb0f85e3b5eefa7bf5 329 Gene3D G3DSA:3.40.50.150 85 309 3.9E-25 T 13-10-2018 Thivi_3570 47d88e19c3aa4afb0f85e3b5eefa7bf5 329 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 327 4.9E-137 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 SUPERFAMILY SSF53955 182 324 1.5E-29 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 SMART SM00257 492 537 2.7E-11 T 13-10-2018 IPR018392 LysM domain Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 Gene3D G3DSA:1.10.530.10 178 331 1.1E-28 T 13-10-2018 Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 Pfam PF01464 Transglycosylase SLT domain 193 291 1.0E-20 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 Pfam PF01476 LysM domain 493 536 4.0E-9 T 13-10-2018 IPR018392 LysM domain Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 SUPERFAMILY SSF54106 491 536 3.79E-8 T 13-10-2018 Thivi_4622 5d4c9079c3338a3d50146f495d0aa689 538 Gene3D G3DSA:3.10.350.10 479 538 4.4E-12 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_1977 65c71479ea6d08adf583bd1e18d53d79 344 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 197 4.2E-9 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Thivi_1977 65c71479ea6d08adf583bd1e18d53d79 344 SUPERFAMILY SSF53187 18 280 7.61E-40 T 13-10-2018 Thivi_1977 65c71479ea6d08adf583bd1e18d53d79 344 Gene3D G3DSA:3.40.630.10 4 289 2.0E-26 T 13-10-2018 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 271 6.8E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_0708 ec758f886230494cf2be120be9c0b048 370 SUPERFAMILY SSF111369 58 272 4.84E-18 T 13-10-2018 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 359 1.4E-56 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 Gene3D G3DSA:2.40.50.100 67 208 1.9E-51 T 13-10-2018 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 Gene3D G3DSA:1.10.287.470 106 173 1.9E-51 T 13-10-2018 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 Gene3D G3DSA:2.40.30.170 53 285 1.9E-51 T 13-10-2018 Thivi_0708 ec758f886230494cf2be120be9c0b048 370 Gene3D G3DSA:2.40.420.20 51 337 1.9E-51 T 13-10-2018 Thivi_1108 2d52afdfa3cb06d25a8a77c2e209160e 227 Pfam PF13649 Methyltransferase domain 49 143 2.7E-17 T 13-10-2018 Thivi_1108 2d52afdfa3cb06d25a8a77c2e209160e 227 Gene3D G3DSA:3.40.50.150 11 226 1.4E-42 T 13-10-2018 Thivi_1108 2d52afdfa3cb06d25a8a77c2e209160e 227 SUPERFAMILY SSF53335 10 224 4.76E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 110 22.869 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 Pfam PF02033 Ribosome-binding factor A 6 110 1.2E-25 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 Gene3D G3DSA:3.30.300.20 1 103 1.5E-27 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 113 6.6E-23 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 SUPERFAMILY SSF89919 3 112 2.35E-27 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Thivi_3169 65083be386ae2f5e83c900a10f3ed0e9 129 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 1.0E-17 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 TIGRFAM TIGR04256 GxxExxY: GxxExxY protein 7 123 1.2E-38 T 13-10-2018 IPR026350 GxxExxY protein Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 Pfam PF13366 PD-(D/E)XK nuclease superfamily 6 122 5.5E-38 T 13-10-2018 IPR026350 GxxExxY protein Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 Gene3D G3DSA:3.40.50.1980 305 432 1.7E-10 T 13-10-2018 Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 Pfam PF01497 Periplasmic binding protein 185 373 2.7E-10 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 SUPERFAMILY SSF53807 185 429 1.02E-22 T 13-10-2018 Thivi_1702 a1994cd28e58640f793d5b52cb96a603 440 Gene3D G3DSA:3.40.50.1980 175 299 1.2E-5 T 13-10-2018 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 SUPERFAMILY SSF56176 16 209 3.36E-59 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 Pfam PF08031 Berberine and berberine like 415 459 1.6E-13 T 13-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 Gene3D G3DSA:3.40.462.20 209 420 1.3E-116 T 13-10-2018 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 Pfam PF01565 FAD binding domain 43 177 7.2E-35 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 Gene3D G3DSA:3.30.465.10 109 447 1.3E-116 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 Gene3D G3DSA:3.30.43.10 18 95 8.5E-30 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Thivi_1409 dc671129ef891eb8d8c208e6680496ae 468 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 13-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 469 785 2.2E-59 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Gene3D G3DSA:3.50.30.10 370 476 5.5E-40 T 13-10-2018 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Gene3D G3DSA:3.30.1490.20 1 194 1.3E-72 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 SUPERFAMILY SSF56059 1 384 1.77E-108 T 13-10-2018 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Gene3D G3DSA:3.20.20.60 477 789 1.9E-99 T 13-10-2018 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 4 787 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 340 4.6E-119 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 4.2E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 PIRSF PIRSF000854 1 791 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 Gene3D G3DSA:3.30.470.20 195 356 2.6E-57 T 13-10-2018 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 SUPERFAMILY SSF52009 347 462 5.62E-33 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Thivi_1903 ce84ec4b9b7659b42190fbdaaeca6c55 791 SUPERFAMILY SSF51621 461 787 1.13E-94 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 153 229 1.8E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 Gene3D G3DSA:1.10.760.10 146 232 2.4E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 SUPERFAMILY SSF46626 55 139 1.24E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 Gene3D G3DSA:1.10.760.10 59 139 2.9E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 SUPERFAMILY SSF46626 151 230 4.07E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 Pfam PF00034 Cytochrome c 62 138 6.4E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3493 f3ddc4639eb8eb98bd0ce4e679d39e60 243 PIRSF PIRSF000005 45 234 1.5E-36 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 SUPERFAMILY SSF54292 2 87 4.46E-24 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Pfam PF00970 Oxidoreductase FAD-binding domain 103 195 4.4E-15 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 296 304 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 190 199 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 231 240 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 206 225 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 130 142 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 146 153 1.7E-21 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 79 4.5E-15 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Gene3D G3DSA:2.40.30.10 99 197 8.0E-26 T 13-10-2018 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 SUPERFAMILY SSF52343 199 330 2.75E-42 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Gene3D G3DSA:3.40.50.80 198 331 2.0E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Pfam PF00175 Oxidoreductase NAD-binding domain 207 308 8.7E-23 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 SUPERFAMILY SSF63380 100 196 5.2E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_3871 b195f767e92bab447dab8d6b244fc0a4 337 Gene3D G3DSA:3.10.20.30 1 97 1.9E-23 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 Gene3D G3DSA:3.40.50.300 545 678 3.4E-5 T 13-10-2018 Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 27 230 1.7E-13 T 13-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 Gene3D G3DSA:1.10.3210.30 4 260 8.3E-31 T 13-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 SUPERFAMILY SSF52540 301 667 5.67E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 SMART SM00487 282 518 0.0023 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1079 10a84b00eed23e30b89a9c206a602efd 877 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 302 666 3.7E-54 T 13-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Thivi_1184 1f0275e705ed109da8da799a47b54048 74 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.2E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.2E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.2E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.2E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 6.0E-19 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 SUPERFAMILY SSF46911 3 74 1.16E-28 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 Gene3D G3DSA:4.10.640.10 1 74 6.8E-28 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 Pfam PF01084 Ribosomal protein S18 18 68 5.4E-25 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.335 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1184 1f0275e705ed109da8da799a47b54048 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.9E-36 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 SUPERFAMILY SSF46894 129 228 6.8E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 Gene3D G3DSA:1.10.10.10 128 230 8.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 SMART SM00862 154 228 2.5E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 228 2.1E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 Gene3D G3DSA:3.40.50.2300 1 127 5.3E-36 T 13-10-2018 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 SMART SM00448 4 114 1.4E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 Pfam PF00072 Response regulator receiver domain 6 114 3.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0782 81d48572eeb1b4447a4996aec2893aa7 232 SUPERFAMILY SSF52172 2 123 2.13E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 SUPERFAMILY SSF116878 119 445 8.11E-44 T 13-10-2018 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 118 1.7E-37 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 361 2.2E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Gene3D G3DSA:1.20.120.430 120 445 1.7E-92 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Pfam PF12631 MnmE helical domain 121 442 5.6E-51 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Pfam PF01926 50S ribosome-binding GTPase 217 303 8.9E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 SUPERFAMILY SSF52540 71 363 1.27E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Gene3D G3DSA:3.30.1360.120 1 119 2.2E-41 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 PRINTS PR00449 Transforming protein P21 ras signature 317 330 8.6E-5 T 13-10-2018 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 PRINTS PR00449 Transforming protein P21 ras signature 215 236 8.6E-5 T 13-10-2018 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 PRINTS PR00449 Transforming protein P21 ras signature 255 277 8.6E-5 T 13-10-2018 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 445 32.013 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 445 2.4E-95 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Thivi_3008 70adb4f4f5b5adb9067d696a18db7736 445 Gene3D G3DSA:3.40.50.300 215 373 1.7E-92 T 13-10-2018 Thivi_4228 a3e0479f37841666097a3724a6978fde 255 SUPERFAMILY SSF101852 161 245 3.01E-17 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Thivi_4228 a3e0479f37841666097a3724a6978fde 255 PIRSF PIRSF006779 5 247 1.9E-47 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Thivi_4228 a3e0479f37841666097a3724a6978fde 255 Gene3D G3DSA:3.40.50.10790 2 157 2.8E-42 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Thivi_4228 a3e0479f37841666097a3724a6978fde 255 Gene3D G3DSA:2.40.30.90 162 246 2.0E-20 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Thivi_4228 a3e0479f37841666097a3724a6978fde 255 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 9 245 1.2E-63 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase Thivi_4228 a3e0479f37841666097a3724a6978fde 255 SUPERFAMILY SSF102522 8 149 8.37E-41 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Thivi_2382 da6d6b6313ccf96bf2a30a6bed8b6b9a 59 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 58 5.0E-10 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Thivi_2382 da6d6b6313ccf96bf2a30a6bed8b6b9a 59 Gene3D G3DSA:3.30.920.30 1 59 1.7E-7 T 13-10-2018 IPR038570 HicA superfamily Thivi_2382 da6d6b6313ccf96bf2a30a6bed8b6b9a 59 SUPERFAMILY SSF54786 1 58 1.65E-11 T 13-10-2018 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 ProSitePatterns PS00018 EF-hand calcium-binding domain. 42 54 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Gene3D G3DSA:1.10.238.10 37 109 4.1E-10 T 13-10-2018 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Pfam PF13202 EF hand 80 97 0.014 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Pfam PF13202 EF hand 143 162 0.0062 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Pfam PF13202 EF hand 38 57 0.0035 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Pfam PF13202 EF hand 186 203 0.0021 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 ProSitePatterns PS00018 EF-hand calcium-binding domain. 148 160 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 ProSitePatterns PS00018 EF-hand calcium-binding domain. 191 203 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 Gene3D G3DSA:1.10.238.10 141 216 7.7E-9 T 13-10-2018 Thivi_4466 847ea3443e96f5336d868b4915eb52bf 223 SUPERFAMILY SSF47473 38 203 4.2E-15 T 13-10-2018 IPR011992 EF-hand domain pair Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Pfam PF08447 PAS fold 229 309 4.1E-15 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SMART SM00091 74 140 2.2E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SMART SM00091 200 268 3.1 T 13-10-2018 IPR000014 PAS domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Gene3D G3DSA:3.30.450.20 193 313 1.7E-26 T 13-10-2018 Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SMART SM00267 317 489 2.2E-52 T 13-10-2018 IPR000160 GGDEF domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SUPERFAMILY SSF55785 61 186 1.43E-16 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Gene3D G3DSA:3.30.70.270 322 492 3.4E-53 T 13-10-2018 Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SUPERFAMILY SSF55073 333 490 7.22E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SMART SM00086 146 188 0.62 T 13-10-2018 IPR001610 PAC motif Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SMART SM00086 275 317 2.3E-6 T 13-10-2018 IPR001610 PAC motif Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Gene3D G3DSA:3.30.450.20 59 185 2.0E-14 T 13-10-2018 Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 486 6.1E-40 T 13-10-2018 IPR000160 GGDEF domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 322 1.3E-9 T 13-10-2018 IPR000014 PAS domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 72 195 3.4E-13 T 13-10-2018 IPR000014 PAS domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Pfam PF13426 PAS domain 85 186 4.5E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 SUPERFAMILY SSF55785 207 320 2.42E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2549 f9267194b6932dc24a796e5f84d8f813 493 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 480 1.7E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 PRINTS PR01021 OMPA domain signature 702 717 1.0E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 PRINTS PR01021 OMPA domain signature 717 733 1.0E-7 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 SMART SM00382 42 185 7.9E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 Gene3D G3DSA:3.40.50.300 25 185 1.5E-14 T 13-10-2018 Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 Pfam PF13401 AAA domain 42 170 5.7E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 SUPERFAMILY SSF52540 12 267 4.95E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 Pfam PF00691 OmpA family 672 753 1.7E-13 T 13-10-2018 IPR006665 OmpA-like domain Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 Gene3D G3DSA:3.30.1330.60 659 775 2.9E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_4261 65ad83170b82102218d8b6d8453c8483 778 SUPERFAMILY SSF103088 662 769 1.2E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 SUPERFAMILY SSF51735 6 246 7.76E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 Gene3D G3DSA:3.40.50.720 2 249 3.9E-62 T 13-10-2018 Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.8E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.8E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 6.8E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 6.8E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_1133 5d92a4f1558364e2bb126b3c8cf0a891 256 Pfam PF00106 short chain dehydrogenase 15 210 1.6E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_1986 8367d08efd81f9c391a857a4514e3259 73 Gene3D G3DSA:4.10.220.20 9 64 6.3E-22 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1986 8367d08efd81f9c391a857a4514e3259 73 SUPERFAMILY SSF56918 12 60 3.4E-9 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1986 8367d08efd81f9c391a857a4514e3259 73 Pfam PF00556 Antenna complex alpha/beta subunit 14 47 4.2E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0353 9540a40ecec78d0b00aed208466a72bd 474 Gene3D G3DSA:1.10.3210.10 13 264 1.6E-26 T 13-10-2018 Thivi_0353 9540a40ecec78d0b00aed208466a72bd 474 SUPERFAMILY SSF109604 15 265 1.1E-28 T 13-10-2018 Thivi_0353 9540a40ecec78d0b00aed208466a72bd 474 Gene3D G3DSA:3.30.450.40 323 472 2.5E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0353 9540a40ecec78d0b00aed208466a72bd 474 SUPERFAMILY SSF55781 327 469 3.64E-8 T 13-10-2018 Thivi_0353 9540a40ecec78d0b00aed208466a72bd 474 Pfam PF08668 HDOD domain 18 210 9.3E-22 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01021 OMPA domain signature 444 459 3.2E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01021 OMPA domain signature 459 475 3.2E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01021 OMPA domain signature 414 436 3.2E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 SUPERFAMILY SSF103088 403 514 5.1E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 ProSitePatterns PS01068 OmpA-like domain. 446 490 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 Gene3D G3DSA:3.30.1330.60 381 516 4.0E-37 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 Pfam PF00691 OmpA family 414 508 3.3E-21 T 13-10-2018 IPR006665 OmpA-like domain Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 459 476 1.5E-7 T 13-10-2018 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 374 393 1.5E-7 T 13-10-2018 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 497 516 1.5E-7 T 13-10-2018 Thivi_0490 b25ff64cd10bef5cea94c8527566d506 516 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 477 496 1.5E-7 T 13-10-2018 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 Pfam PF02421 Ferrous iron transport protein B 18 170 5.5E-66 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 Pfam PF07670 Nucleoside recognition 525 713 7.6E-32 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 Pfam PF07670 Nucleoside recognition 366 457 4.1E-15 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 Gene3D G3DSA:3.40.50.300 17 185 6.2E-49 T 13-10-2018 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 40 58 4.6E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 67 82 4.6E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 19 39 4.6E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 SUPERFAMILY SSF52540 17 176 4.27E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 Pfam PF07664 Ferrous iron transport protein B C terminus 468 520 3.1E-21 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 23 710 3.1E-190 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Thivi_1630 19268783e320ca33744d55e2d7abd7df 777 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 168 3.7E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Gene3D G3DSA:3.40.50.300 58 315 7.1E-109 T 13-10-2018 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 SUPERFAMILY SSF52540 63 401 1.05E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 13 412 6.0E-201 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Gene3D G3DSA:3.30.50.30 4 54 1.9E-25 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Gene3D G3DSA:1.10.8.60 316 424 4.2E-38 T 13-10-2018 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 7 415 52.573 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 SUPERFAMILY SSF57716 15 50 7.27E-12 T 13-10-2018 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 393 1.8E-14 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 SMART SM00994 14 53 1.8E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 SMART SM00382 112 266 7.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Pfam PF06689 ClpX C4-type zinc finger 15 52 2.1E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 310 2.2E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0629 896080d37e2be59935f875aba8a4e67c 424 SMART SM01086 317 412 1.3E-31 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_2386 95c4a41c875c419a41333589b4117611 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 41.875 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 SUPERFAMILY SSF51419 26 282 2.36E-81 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 3.2E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 3.2E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 3.2E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 3.2E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 3.2E-26 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 5.4E-73 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 Gene3D G3DSA:2.40.37.10 17 408 5.1E-151 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.5E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.5E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 1.5E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.5E-30 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 29 368 3.6E-23 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Thivi_2386 95c4a41c875c419a41333589b4117611 415 Gene3D G3DSA:3.20.20.10 34 275 5.1E-151 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_2386 95c4a41c875c419a41333589b4117611 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 411 3.2E-159 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2386 95c4a41c875c419a41333589b4117611 415 SUPERFAMILY SSF50621 253 412 1.51E-51 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 Gene3D G3DSA:3.40.50.1100 14 421 1.0E-166 T 13-10-2018 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 TIGRFAM TIGR01415 trpB_rel: pyridoxal-phosphate dependent TrpB-like enzyme 14 430 3.2E-195 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 PIRSF PIRSF001413 10 434 1.6E-124 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 SUPERFAMILY SSF53686 29 428 4.45E-110 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 Gene3D G3DSA:3.40.50.1100 15 239 1.0E-166 T 13-10-2018 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 PIRSF PIRSF500824 2 437 1.0E-201 T 13-10-2018 IPR006316 Tryptophan synthase, beta chain-like GO:0000162|GO:0004834|GO:0030170 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 106 120 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 22 428 40.076 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0558 291f2c9bf4ba8ddb7a316b0d1c5bf247 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 415 5.0E-38 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 SUPERFAMILY SSF53244 317 475 1.68E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 117 141 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 Gene3D G3DSA:3.90.190.20 327 477 1.4E-43 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 402 9.8E-15 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 Gene3D G3DSA:3.40.1190.10 111 299 8.7E-43 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 SUPERFAMILY SSF53623 111 254 3.4E-41 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_3779 979993e18b58d8b4eefc4a24b1a78cca 479 Pfam PF08245 Mur ligase middle domain 119 243 1.2E-26 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 SUPERFAMILY SSF51726 396 756 1.29E-116 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 756 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 37.676 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 2.4E-121 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 Gene3D G3DSA:3.20.20.210 6 524 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 SUPERFAMILY SSF51726 4 392 3.53E-116 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 753 1.3E-151 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Thivi_1686 149bc6829ab43a30cbd56ac1c30ad97a 760 PIRSF PIRSF000382 1 760 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Thivi_4095 4d398253e6fce2315243fecb4e6210c2 304 Gene3D G3DSA:3.40.190.10 162 262 3.8E-35 T 13-10-2018 Thivi_4095 4d398253e6fce2315243fecb4e6210c2 304 SMART SM00062 72 300 1.4E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4095 4d398253e6fce2315243fecb4e6210c2 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 75 286 1.1E-30 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_4095 4d398253e6fce2315243fecb4e6210c2 304 Gene3D G3DSA:3.40.190.10 70 286 3.8E-35 T 13-10-2018 Thivi_4095 4d398253e6fce2315243fecb4e6210c2 304 SUPERFAMILY SSF53850 25 288 2.0E-35 T 13-10-2018 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 269 277 - T 13-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 7 605 49.682 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Gene3D G3DSA:3.40.449.10 18 244 3.2E-260 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 PIRSF PIRSF001348 2 607 1.1E-270 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Gene3D G3DSA:3.90.228.20 245 598 3.2E-260 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 245 603 1.6E-162 T 13-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Gene3D G3DSA:2.170.8.10 54 401 3.2E-260 T 13-10-2018 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 SUPERFAMILY SSF68923 7 244 2.3E-101 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 18 241 5.6E-104 T 13-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Thivi_0237 7493db418b655a08aed76fd797ff2e66 626 SUPERFAMILY SSF53795 245 604 5.49E-151 T 13-10-2018 Thivi_0664 389a9aeb3123d74b71b9741e205165d8 131 Pfam PF00011 Hsp20/alpha crystallin family 32 128 3.4E-16 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Thivi_0664 389a9aeb3123d74b71b9741e205165d8 131 Gene3D G3DSA:2.60.40.790 1 130 1.9E-23 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_0664 389a9aeb3123d74b71b9741e205165d8 131 SUPERFAMILY SSF49764 19 129 1.71E-25 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 Gene3D G3DSA:3.40.1010.10 1 111 1.6E-26 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 Gene3D G3DSA:3.30.950.10 112 232 3.9E-42 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 211 1.1E-41 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 254 4.5E-90 T 13-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_1677 b8cdcff7ac404007a49aeebf8e46f82b 271 SUPERFAMILY SSF53790 1 236 8.77E-61 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_0509 187d0857fde9d3531b3eb8a81edfc1b0 197 Pfam PF03734 L,D-transpeptidase catalytic domain 60 195 2.1E-20 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_0509 187d0857fde9d3531b3eb8a81edfc1b0 197 SUPERFAMILY SSF141523 59 195 1.96E-23 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_0509 187d0857fde9d3531b3eb8a81edfc1b0 197 Gene3D G3DSA:2.40.440.10 45 197 1.9E-22 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_2373 79ce92fa5e901ef077c8ea66db558a5b 172 Pfam PF08765 Mor transcription activator family 56 131 2.6E-7 T 13-10-2018 IPR014875 Mor transcription activator Thivi_2373 79ce92fa5e901ef077c8ea66db558a5b 172 SUPERFAMILY SSF46689 18 128 1.47E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 123 135 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:1.25.40.10 363 506 9.2E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:3.90.1580.10 946 1234 2.7E-76 T 13-10-2018 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 12 35 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Pfam PF00069 Protein kinase domain 6 251 3.1E-48 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:1.25.40.10 521 789 9.9E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:1.25.40.10 790 945 5.5E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:1.10.510.10 86 278 4.5E-46 T 13-10-2018 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 581 614 0.71 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 902 935 160.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 473 506 8.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 636 669 79.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 800 833 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 526 559 220.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 369 402 100.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00028 738 771 34.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SUPERFAMILY SSF48452 369 614 9.45E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SUPERFAMILY SSF56112 3 258 1.62E-72 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SUPERFAMILY SSF56436 953 1223 1.01E-66 T 13-10-2018 IPR016187 C-type lectin fold Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SMART SM00220 6 264 2.9E-57 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 SUPERFAMILY SSF48452 582 937 1.55E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Pfam PF03781 Sulfatase-modifying factor enzyme 1 955 1222 6.7E-59 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_4543 2e23c29f491bc94ed37c67a446696630 1247 Gene3D G3DSA:3.30.200.20 1 85 3.8E-27 T 13-10-2018 Thivi_3043 83752764288b9abb7e2b4224c96d052d 395 Pfam PF00534 Glycosyl transferases group 1 195 358 7.4E-37 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3043 83752764288b9abb7e2b4224c96d052d 395 Gene3D G3DSA:3.40.50.2000 1 193 1.1E-36 T 13-10-2018 Thivi_3043 83752764288b9abb7e2b4224c96d052d 395 Gene3D G3DSA:3.40.50.2000 194 380 7.9E-40 T 13-10-2018 Thivi_3043 83752764288b9abb7e2b4224c96d052d 395 Pfam PF13439 Glycosyltransferase Family 4 15 183 2.0E-31 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_3043 83752764288b9abb7e2b4224c96d052d 395 SUPERFAMILY SSF53756 2 379 1.39E-85 T 13-10-2018 Thivi_1639 a69ffc108edddc6aeacc0ba31272c432 92 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 5 91 2.8E-7 T 13-10-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin Thivi_1639 a69ffc108edddc6aeacc0ba31272c432 92 Gene3D G3DSA:3.30.2310.20 3 92 3.8E-8 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1639 a69ffc108edddc6aeacc0ba31272c432 92 SUPERFAMILY SSF143011 1 91 6.41E-14 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_2823 c396fb840d9a0918066af9ee540d82a5 431 Pfam PF08014 Domain of unknown function (DUF1704) 40 401 4.0E-125 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 Thivi_2823 c396fb840d9a0918066af9ee540d82a5 431 SMART SM01154 39 405 1.5E-148 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Gene3D G3DSA:1.10.10.10 253 329 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0484 3e266045d71463afb9c0e59166746de8 338 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 63 336 3.7E-132 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 127 140 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Pfam PF04539 Sigma-70 region 3 183 258 3.4E-19 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Gene3D G3DSA:1.10.10.10 176 251 1.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0484 3e266045d71463afb9c0e59166746de8 338 SUPERFAMILY SSF88659 176 250 1.44E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Gene3D G3DSA:1.10.601.10 14 172 2.0E-47 T 13-10-2018 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Pfam PF04545 Sigma-70, region 4 271 324 1.3E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 PRINTS PR00046 Major sigma-70 factor signature 151 159 5.4E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 PRINTS PR00046 Major sigma-70 factor signature 296 311 5.4E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 PRINTS PR00046 Major sigma-70 factor signature 127 140 5.4E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 PRINTS PR00046 Major sigma-70 factor signature 275 287 5.4E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 PRINTS PR00046 Major sigma-70 factor signature 311 322 5.4E-26 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Pfam PF04542 Sigma-70 region 2 104 172 4.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 99 325 1.9E-37 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 SUPERFAMILY SSF88659 234 330 1.01E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0484 3e266045d71463afb9c0e59166746de8 338 SUPERFAMILY SSF88946 65 173 1.31E-45 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Pfam PF00140 Sigma-70 factor, region 1.2 65 97 2.1E-10 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0484 3e266045d71463afb9c0e59166746de8 338 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 11 337 39.99 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_4563 f4f49a1e93f9cc20944852cf7a02e883 114 SUPERFAMILY SSF69721 12 106 1.19E-20 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_4563 f4f49a1e93f9cc20944852cf7a02e883 114 Pfam PF04358 DsrC like protein 13 105 4.1E-16 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_4563 f4f49a1e93f9cc20944852cf7a02e883 114 Gene3D G3DSA:1.10.10.370 48 107 1.3E-11 T 13-10-2018 Thivi_4563 f4f49a1e93f9cc20944852cf7a02e883 114 Gene3D G3DSA:3.30.1420.10 8 43 4.4E-7 T 13-10-2018 Thivi_2159 c039feab614d1e8ef07ec1f8329491a3 159 Gene3D G3DSA:3.40.1260.10 1 159 7.5E-43 T 13-10-2018 IPR027396 DsrEFH-like Thivi_2159 c039feab614d1e8ef07ec1f8329491a3 159 SUPERFAMILY SSF75169 4 157 1.08E-20 T 13-10-2018 IPR027396 DsrEFH-like Thivi_2159 c039feab614d1e8ef07ec1f8329491a3 159 ProSitePatterns PS00018 EF-hand calcium-binding domain. 128 140 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site Thivi_2159 c039feab614d1e8ef07ec1f8329491a3 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 157 1.2E-56 T 13-10-2018 IPR032836 DsrE2-like family Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 Gene3D G3DSA:3.10.25.10 215 314 4.2E-34 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 SUPERFAMILY SSF53328 7 212 9.16E-64 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 9 313 37.623 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 10 311 1.5E-94 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 Pfam PF00551 Formyl transferase 11 188 1.2E-42 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 Pfam PF02911 Formyl transferase, C-terminal domain 212 309 1.7E-31 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 SUPERFAMILY SSF50486 213 312 2.51E-33 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Thivi_3197 bc9d6b1a7b8c85b7c9a80dacd52a8899 318 Gene3D G3DSA:3.40.50.170 4 214 9.6E-78 T 13-10-2018 Thivi_0962 778d7c846f75b9d29bab3f460589b210 118 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 7.1E-26 T 13-10-2018 Thivi_0962 778d7c846f75b9d29bab3f460589b210 118 SUPERFAMILY SSF81301 1 107 1.41E-37 T 13-10-2018 Thivi_0962 778d7c846f75b9d29bab3f460589b210 118 Gene3D G3DSA:3.30.460.10 1 117 8.6E-37 T 13-10-2018 Thivi_0962 778d7c846f75b9d29bab3f460589b210 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.282 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Thivi_0962 778d7c846f75b9d29bab3f460589b210 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.2E-35 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Thivi_1373 8d50ae014a2cb737c8da989f4ff4ca99 184 Pfam PF01899 Na+/H+ ion antiporter subunit 24 163 1.5E-22 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 SUPERFAMILY SSF46626 25 107 9.61E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Gene3D G3DSA:1.10.760.10 24 108 1.1E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 SUPERFAMILY SSF46626 280 396 4.71E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 SUPERFAMILY SSF46626 405 508 2.68E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 417 496 1.0E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 SUPERFAMILY SSF46626 140 211 3.3E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Gene3D G3DSA:1.10.760.10 265 404 7.3E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Pfam PF00034 Cytochrome c 41 106 1.2E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Gene3D G3DSA:1.10.760.10 406 520 1.6E-39 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3993 0f33c6574db3d6931f6f9d398ba6260d 536 Gene3D G3DSA:1.10.760.10 136 214 1.0E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4059 34fe985af64f2b5ac17b9bb3a329bdb2 314 SUPERFAMILY SSF53448 44 286 1.87E-8 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0922 40de3382390d40079bb414d2378a1844 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 51.42 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Thivi_0922 40de3382390d40079bb414d2378a1844 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 2.5E-150 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Thivi_0922 40de3382390d40079bb414d2378a1844 361 Gene3D G3DSA:3.40.718.10 1 357 2.5E-146 T 13-10-2018 Thivi_0922 40de3382390d40079bb414d2378a1844 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Thivi_0922 40de3382390d40079bb414d2378a1844 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 1.7E-132 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Thivi_0922 40de3382390d40079bb414d2378a1844 361 SUPERFAMILY SSF53659 3 357 4.03E-120 T 13-10-2018 Thivi_0922 40de3382390d40079bb414d2378a1844 361 SMART SM01329 4 353 3.7E-202 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 Gene3D G3DSA:3.30.70.20 55 101 4.0E-5 T 13-10-2018 Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 Gene3D G3DSA:3.30.70.20 5 49 1.6E-7 T 13-10-2018 Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 Pfam PF14697 4Fe-4S dicluster domain 22 94 9.6E-11 T 13-10-2018 Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 5 97 1.6E-33 T 13-10-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific Thivi_2734 8ed8f95301a411219cad338ed3782ce9 102 SUPERFAMILY SSF54862 9 97 3.35E-17 T 13-10-2018 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 SUPERFAMILY SSF52540 3 235 2.93E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Pfam PF00005 ABC transporter 340 470 1.3E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Pfam PF12848 ABC transporter 225 301 4.0E-9 T 13-10-2018 IPR032781 ABC-transporter extension domain Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Gene3D G3DSA:3.40.50.300 3 280 3.8E-65 T 13-10-2018 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 SMART SM00382 345 516 9.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 SMART SM00382 28 231 4.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Pfam PF00005 ABC transporter 19 186 7.0E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Gene3D G3DSA:1.10.287.380 553 634 2.6E-24 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Gene3D G3DSA:3.40.50.300 283 546 8.3E-63 T 13-10-2018 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 SUPERFAMILY SSF52540 310 518 7.41E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0262 2ce03d0aa7f44746f46dcfaced967ff7 634 Pfam PF16326 ABC transporter C-terminal domain 563 631 1.3E-22 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Thivi_3747 ac84681031199c538a6ce3b395528207 212 SUPERFAMILY SSF52833 11 111 5.68E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3747 ac84681031199c538a6ce3b395528207 212 Gene3D G3DSA:1.20.1050.10 89 192 2.3E-76 T 13-10-2018 Thivi_3747 ac84681031199c538a6ce3b395528207 212 Gene3D G3DSA:3.40.30.10 11 201 2.3E-76 T 13-10-2018 Thivi_3747 ac84681031199c538a6ce3b395528207 212 PRINTS PR01625 Omega-class glutathione S-transferase signature 9 24 4.3E-5 T 13-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Thivi_3747 ac84681031199c538a6ce3b395528207 212 PRINTS PR01625 Omega-class glutathione S-transferase signature 148 167 4.3E-5 T 13-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Thivi_3747 ac84681031199c538a6ce3b395528207 212 PRINTS PR01625 Omega-class glutathione S-transferase signature 83 97 4.3E-5 T 13-10-2018 IPR005442 Glutathione S-transferase, omega-class GO:0004364|GO:0005737 KEGG: 00053+1.8.5.1|KEGG: 00480+2.5.1.18+1.8.5.1|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|KEGG: 00983+2.5.1.18|MetaCyc: PWY-2261|MetaCyc: PWY-4061|MetaCyc: PWY-4202|MetaCyc: PWY-6370|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533|Reactome: R-HSA-156590|Reactome: R-HSA-196836 Thivi_3747 ac84681031199c538a6ce3b395528207 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-20 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Thivi_3747 ac84681031199c538a6ce3b395528207 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 191 4.5E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal Thivi_3747 ac84681031199c538a6ce3b395528207 212 ProSitePatterns PS00195 Glutaredoxin active site. 13 29 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Thivi_3747 ac84681031199c538a6ce3b395528207 212 SUPERFAMILY SSF47616 82 207 4.55E-28 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 SUPERFAMILY SSF52540 324 554 4.55E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 Pfam PF00664 ABC transporter transmembrane region 23 280 1.8E-6 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 Gene3D G3DSA:1.20.1560.10 9 316 1.5E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 Gene3D G3DSA:3.40.50.300 320 562 2.8E-67 T 13-10-2018 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 SUPERFAMILY SSF90123 13 316 3.14E-36 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 SMART SM00382 357 557 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 Pfam PF00005 ABC transporter 348 495 7.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1940 1ba67a3536dc17fd77ca0d2eca9b9c79 574 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 556 6.8E-232 T 13-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 203 267 1.0E-27 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 Gene3D G3DSA:3.30.70.1400 41 128 6.4E-38 T 13-10-2018 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 PIRSF PIRSF006487 188 335 1.6 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 PIRSF PIRSF006487 26 160 3.2E-10 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 Gene3D G3DSA:3.30.70.1630 38 209 6.4E-38 T 13-10-2018 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 SUPERFAMILY SSF101790 260 339 2.03E-11 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 Gene3D G3DSA:2.40.30.160 212 333 1.1E-36 T 13-10-2018 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 242 317 4.4E-5 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 SUPERFAMILY SSF103025 31 258 2.2E-57 T 13-10-2018 Thivi_0762 0802a9129a3c5cd6d6415948efc7dc8d 342 Pfam PF01571 Aminomethyltransferase folate-binding domain 35 144 2.2E-11 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.534 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 57 9.6E-16 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 SUPERFAMILY SSF52374 3 156 1.5E-42 T 13-10-2018 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 Gene3D G3DSA:3.40.50.620 2 158 2.5E-53 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.1E-58 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 76 0.001 T 13-10-2018 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.0E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.0E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 4.0E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.0E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.0E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Thivi_2995 80cee0bf0881383a2786adf2fc868710 158 Pfam PF01467 Cytidylyltransferase-like 5 133 6.8E-19 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 199 294 5.2E-29 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 299 83.568 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 SUPERFAMILY SSF56176 9 190 1.93E-35 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Gene3D G3DSA:3.30.43.10 5 81 2.6E-21 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Pfam PF01565 FAD binding domain 33 160 7.1E-17 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Gene3D G3DSA:3.30.465.10 88 211 9.3E-29 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 SUPERFAMILY SSF56194 196 294 7.19E-35 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 Gene3D G3DSA:3.90.78.10 212 297 1.8E-32 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2317 c240a08515ee0697bcf7407228345ac0 299 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 293 2.2E-54 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SUPERFAMILY SSF48403 30 315 1.61E-71 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 163 192 7.3E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 196 225 5.8E-7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 64 93 4.5E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 31 60 1100.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 262 293 28.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 97 126 0.053 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 130 159 27.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 SMART SM00248 229 258 0.13 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Gene3D G3DSA:1.25.40.20 14 118 2.2E-22 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Gene3D G3DSA:1.25.40.20 119 220 2.8E-34 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Gene3D G3DSA:1.25.40.20 221 319 8.1E-27 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 PRINTS PR01415 Ankyrin repeat signature 164 179 3.0E-7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 PRINTS PR01415 Ankyrin repeat signature 212 226 3.0E-7 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Pfam PF12796 Ankyrin repeats (3 copies) 37 126 6.7E-12 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Pfam PF12796 Ankyrin repeats (3 copies) 234 316 4.3E-10 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_4482 1134f3c42b997ffc6033f746a80428ff 320 Pfam PF12796 Ankyrin repeats (3 copies) 135 227 4.8E-20 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_2531 59d5795c4bfe800a7f548f4a39dc63db 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.668 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Thivi_2531 59d5795c4bfe800a7f548f4a39dc63db 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 2.0E-33 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Thivi_2531 59d5795c4bfe800a7f548f4a39dc63db 105 Gene3D G3DSA:1.10.287.1080 1 94 3.2E-32 T 13-10-2018 Thivi_2531 59d5795c4bfe800a7f548f4a39dc63db 105 SUPERFAMILY SSF101386 3 92 1.07E-26 T 13-10-2018 Thivi_2531 59d5795c4bfe800a7f548f4a39dc63db 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 91 2.6E-18 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Thivi_1935 f3155cdf56b12b02a0153a47a430b00a 217 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 194 7.0E-57 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_1935 f3155cdf56b12b02a0153a47a430b00a 217 Pfam PF04205 FMN-binding domain 101 190 8.6E-16 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_1935 f3155cdf56b12b02a0153a47a430b00a 217 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 195 23.659 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_1935 f3155cdf56b12b02a0153a47a430b00a 217 SMART SM00900 101 193 7.7E-34 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_1935 f3155cdf56b12b02a0153a47a430b00a 217 PIRSF PIRSF006091 1 206 3.0E-67 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_3623 1a1760676ee6537f57647f3933abde04 726 Pfam PF06202 Amylo-alpha-1,6-glucosidase 290 653 1.5E-11 T 13-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Thivi_3623 1a1760676ee6537f57647f3933abde04 726 SUPERFAMILY SSF48208 260 707 3.33E-87 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Thivi_3623 1a1760676ee6537f57647f3933abde04 726 Gene3D G3DSA:1.50.10.10 277 661 1.2E-49 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Thivi_3623 1a1760676ee6537f57647f3933abde04 726 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 34 225 4.1E-52 T 13-10-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal Thivi_3213 7b27d2fbefaeb80384682a86f0deccc8 410 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 313 2.7E-25 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_3213 7b27d2fbefaeb80384682a86f0deccc8 410 Gene3D G3DSA:1.10.8.60 316 392 5.5E-9 T 13-10-2018 Thivi_3213 7b27d2fbefaeb80384682a86f0deccc8 410 SMART SM00382 183 317 4.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3213 7b27d2fbefaeb80384682a86f0deccc8 410 Gene3D G3DSA:3.40.50.300 135 315 2.2E-32 T 13-10-2018 Thivi_3213 7b27d2fbefaeb80384682a86f0deccc8 410 SUPERFAMILY SSF52540 139 384 1.9E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3748 d8eaf6edb40af870d106d377106c74c6 162 SUPERFAMILY SSF101738 6 117 1.27E-46 T 13-10-2018 IPR036760 SspB-like superfamily Thivi_3748 d8eaf6edb40af870d106d377106c74c6 162 Gene3D G3DSA:2.30.30.220 5 130 3.5E-47 T 13-10-2018 IPR036760 SspB-like superfamily Thivi_3748 d8eaf6edb40af870d106d377106c74c6 162 PIRSF PIRSF005276 5 162 7.1E-50 T 13-10-2018 IPR007481 Stringent starvation protein B Thivi_3748 d8eaf6edb40af870d106d377106c74c6 162 Pfam PF04386 Stringent starvation protein B 12 162 2.3E-34 T 13-10-2018 IPR007481 Stringent starvation protein B Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Gene3D G3DSA:3.40.50.720 160 310 1.2E-42 T 13-10-2018 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 SUPERFAMILY SSF69075 315 416 9.29E-27 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.7E-47 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 SUPERFAMILY SSF51735 161 313 5.31E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Gene3D G3DSA:3.30.460.30 1 156 3.2E-56 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 SUPERFAMILY SSF69742 1 156 9.68E-48 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 416 1.0E-137 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 PIRSF PIRSF000445 1 424 9.5E-158 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.305 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 415 1.4E-25 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Thivi_4174 a380688f6a7c384c876a76e069ce2bb0 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 6.8E-48 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thivi_2416 1f8cc0dcf65230ed9ece633af26c6825 238 Gene3D G3DSA:3.30.70.1290 1 153 1.1E-37 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_2416 1f8cc0dcf65230ed9ece633af26c6825 238 Pfam PF01797 Transposase IS200 like 14 124 9.2E-18 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_2416 1f8cc0dcf65230ed9ece633af26c6825 238 SMART SM01321 9 124 1.9E-43 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_2416 1f8cc0dcf65230ed9ece633af26c6825 238 SUPERFAMILY SSF143422 3 127 8.24E-32 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 3.3E-38 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 SUPERFAMILY SSF50104 3 102 3.76E-32 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 Gene3D G3DSA:2.30.30.30 1 104 3.4E-39 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 20.959 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 6.8E-24 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4212 452a4682820f56c51ad910cc3bebcc62 105 SMART SM00739 3 30 3.8E-4 T 13-10-2018 IPR005824 KOW Thivi_2462 a2c05e31bed78a8f2a4347c7c39d214b 116 Gene3D G3DSA:2.10.109.10 7 106 2.9E-16 T 13-10-2018 Thivi_2462 a2c05e31bed78a8f2a4347c7c39d214b 116 SUPERFAMILY SSF51306 15 99 5.41E-16 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_2462 a2c05e31bed78a8f2a4347c7c39d214b 116 Pfam PF00717 Peptidase S24-like 20 85 3.1E-6 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Thivi_2330 a5329dac39d7b743194b02a48376ca73 616 SUPERFAMILY SSF53822 283 600 3.39E-62 T 13-10-2018 IPR028082 Periplasmic binding protein-like I Thivi_2330 a5329dac39d7b743194b02a48376ca73 616 Gene3D G3DSA:3.40.50.2300 286 590 4.9E-80 T 13-10-2018 Thivi_2330 a5329dac39d7b743194b02a48376ca73 616 Pfam PF04348 LppC putative lipoprotein 64 592 5.1E-92 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA Thivi_2330 a5329dac39d7b743194b02a48376ca73 616 Gene3D G3DSA:1.25.40.650 176 274 2.3E-7 T 13-10-2018 Thivi_2330 a5329dac39d7b743194b02a48376ca73 616 Gene3D G3DSA:3.40.50.2300 390 519 4.9E-80 T 13-10-2018 Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 Gene3D G3DSA:3.30.1340.10 1 88 1.5E-30 T 13-10-2018 IPR035895 HPr-like superfamily Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 SUPERFAMILY SSF55594 1 87 1.7E-27 T 13-10-2018 IPR035895 HPr-like superfamily Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.1E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 8.4E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 8.4E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 8.4E-15 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_2241 54ee221cc6b17db6436e12be12c424c4 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.2E-29 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_2596 992a40ebdad60cd8c0fe56545d29e350 156 Gene3D G3DSA:1.20.5.620 63 122 1.2E-17 T 13-10-2018 Thivi_2596 992a40ebdad60cd8c0fe56545d29e350 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.416 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Thivi_2596 992a40ebdad60cd8c0fe56545d29e350 156 SUPERFAMILY SSF81573 63 121 2.75E-13 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Thivi_2596 992a40ebdad60cd8c0fe56545d29e350 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 1.4E-34 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Thivi_2596 992a40ebdad60cd8c0fe56545d29e350 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.4E-48 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 Gene3D G3DSA:1.10.287.950 100 429 2.2E-66 T 13-10-2018 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 Pfam PF00672 HAMP domain 101 148 2.9E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 SMART SM00283 167 428 2.8E-70 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 SUPERFAMILY SSF58104 121 429 1.57E-72 T 13-10-2018 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 SMART SM00304 101 152 8.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 213 396 6.9E-45 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2102 362cd2a1ca047fc562f4ed1b51d0748b 544 Pfam PF13682 Chemoreceptor zinc-binding domain 444 509 7.7E-9 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 Gene3D G3DSA:3.90.226.10 43 304 8.4E-83 T 13-10-2018 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 19 300 5.2E-129 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 181 199 2.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 247 258 2.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 269 278 2.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 218 235 2.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 147 161 2.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 SUPERFAMILY SSF52096 43 300 6.63E-84 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 18 299 37.455 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Thivi_0915 8d83aa5b50028a6d03d2aee6714d14a6 310 Pfam PF01039 Carboxyl transferase domain 120 259 3.4E-10 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Thivi_3437 328ae3cfe8d0dc46b4e524d892e48b08 121 TIGRFAM TIGR01841 phasin: phasin family protein 32 113 9.6E-8 T 13-10-2018 IPR010127 Phasin, subfamily 1 Thivi_3437 328ae3cfe8d0dc46b4e524d892e48b08 121 Pfam PF09361 Phasin protein 9 106 2.1E-16 T 13-10-2018 IPR018968 Phasin Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 SUPERFAMILY SSF54849 137 203 3.2E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 Gene3D G3DSA:3.30.260.10 136 410 3.0E-242 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 41.845 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.0E-99 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 SUPERFAMILY SSF48592 7 521 6.03E-80 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 Gene3D G3DSA:3.50.7.10 192 372 3.0E-242 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 SUPERFAMILY SSF52029 185 376 1.38E-83 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 Gene3D G3DSA:1.10.560.10 8 521 3.0E-242 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily Thivi_0661 a7ecac2bc47e29bce1dee899f6704128 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.2E-259 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 SUPERFAMILY SSF81653 115 207 6.54E-23 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 Pfam PF00122 E1-E2 ATPase 114 290 4.2E-34 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 Gene3D G3DSA:2.70.150.20 104 212 3.2E-27 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 SUPERFAMILY SSF81665 29 305 3.79E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 378 610 3.1E-46 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 341 2.4E-33 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 SUPERFAMILY SSF56784 299 565 8.45E-38 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 Gene3D G3DSA:3.40.1110.10 322 457 4.9E-51 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 SUPERFAMILY SSF81660 322 456 1.21E-33 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 3.3E-24 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 3.3E-24 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 541 3.3E-24 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 3.3E-24 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.3E-24 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 3 682 0.0 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 536 1.1E-34 T 13-10-2018 Thivi_0082 4fc8f2a3d442afe1918236f4f965581b 688 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 686 40.922 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.40.50.970 15 286 1.8E-86 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 32 274 1.5E-46 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 SUPERFAMILY SSF52518 1118 1426 1.29E-44 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 SUPERFAMILY SSF54862 773 947 3.27E-10 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.40.50.970 1107 1189 2.2E-9 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.40.50.970 1201 1384 5.8E-44 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.40.50.920 290 447 1.0E-37 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 SUPERFAMILY SSF53323 489 697 4.05E-38 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 1565 1617 7.6E-7 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 SUPERFAMILY SSF52922 292 442 2.62E-19 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 1213 1275 2.4E-7 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 497 692 2.7E-26 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 924 935 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.30.70.20 1560 1619 6.1E-10 T 13-10-2018 Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 297 379 4.7E-13 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 SUPERFAMILY SSF52518 14 286 5.89E-56 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Pfam PF00037 4Fe-4S binding domain 781 802 1.7E-4 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 787 798 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3180 be1e911e9700543c4d69f5dc3ef7c5ae 1640 Gene3D G3DSA:3.40.920.10 487 701 8.4E-63 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 37 57 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 34 58 8.6E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 36 58 9.0E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 Pfam PF08334 Type II secretion system (T2SS), protein G 61 165 7.8E-36 T 13-10-2018 IPR013545 Type II secretion system protein G Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 SUPERFAMILY SSF54523 66 165 3.4E-30 T 13-10-2018 Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 PRINTS PR00813 Bacterial general secretion pathway protein G signature 74 92 2.2E-14 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 PRINTS PR00813 Bacterial general secretion pathway protein G signature 38 63 2.2E-14 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 Gene3D G3DSA:3.30.700.10 62 165 4.3E-31 T 13-10-2018 Thivi_2873 cfb4499716d42b8f6719cec81c54fde4 166 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 37 165 5.5E-44 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Thivi_3460 f7633365b597010866e11b89b0a6d47a 373 Gene3D G3DSA:1.10.1240.10 161 236 4.8E-10 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_3460 f7633365b597010866e11b89b0a6d47a 373 Pfam PF02607 B12 binding domain 165 235 5.5E-9 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_3460 f7633365b597010866e11b89b0a6d47a 373 Gene3D G3DSA:3.40.50.280 242 369 6.9E-26 T 13-10-2018 Thivi_3460 f7633365b597010866e11b89b0a6d47a 373 SUPERFAMILY SSF52242 244 363 2.67E-18 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_3460 f7633365b597010866e11b89b0a6d47a 373 Pfam PF02310 B12 binding domain 248 353 3.8E-16 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_3129 5d3b7d6f1c36cd05bf737adfff6fcde1 375 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 302 7.7E-17 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_3129 5d3b7d6f1c36cd05bf737adfff6fcde1 375 Gene3D G3DSA:3.50.50.100 1 375 1.9E-74 T 13-10-2018 Thivi_3129 5d3b7d6f1c36cd05bf737adfff6fcde1 375 SUPERFAMILY SSF51905 3 318 2.92E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3129 5d3b7d6f1c36cd05bf737adfff6fcde1 375 SUPERFAMILY SSF51905 115 245 1.23E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 SUPERFAMILY SSF55347 138 303 7.19E-53 T 13-10-2018 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Gene3D G3DSA:3.30.360.10 137 349 2.2E-168 T 13-10-2018 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Pfam PF01842 ACT domain 355 422 1.8E-12 T 13-10-2018 IPR002912 ACT domain Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 SUPERFAMILY SSF51735 1 159 1.89E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 SUPERFAMILY SSF55021 354 424 2.53E-12 T 13-10-2018 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Gene3D G3DSA:3.40.50.720 4 341 2.2E-168 T 13-10-2018 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Pfam PF00742 Homoserine dehydrogenase 138 316 1.6E-62 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 8.4E-18 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 PIRSF PIRSF000098 1 436 1.3E-162 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Thivi_0004 6bfabe9628d0c3d8218a1a9cc7983296 438 Gene3D G3DSA:3.30.70.260 350 424 2.2E-168 T 13-10-2018 Thivi_0157 dad30666d60b1fd6b616f4604c95fa72 282 Pfam PF04072 Leucine carboxyl methyltransferase 32 183 6.3E-6 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 Thivi_0157 dad30666d60b1fd6b616f4604c95fa72 282 Gene3D G3DSA:3.40.50.150 26 236 1.1E-27 T 13-10-2018 Thivi_0157 dad30666d60b1fd6b616f4604c95fa72 282 SUPERFAMILY SSF53335 28 261 1.12E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1700 b4db4aba4b04f3d8736d86df0a14dc05 264 SMART SM00382 28 219 7.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1700 b4db4aba4b04f3d8736d86df0a14dc05 264 Gene3D G3DSA:3.40.50.300 2 255 1.9E-64 T 13-10-2018 Thivi_1700 b4db4aba4b04f3d8736d86df0a14dc05 264 SUPERFAMILY SSF52540 4 236 2.45E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1700 b4db4aba4b04f3d8736d86df0a14dc05 264 Pfam PF00005 ABC transporter 20 171 3.7E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1700 b4db4aba4b04f3d8736d86df0a14dc05 264 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1082 8e31bc9d3e97f630930d78d032f51884 144 Pfam PF01980 Uncharacterised protein family UPF0066 41 143 2.7E-30 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain Thivi_1082 8e31bc9d3e97f630930d78d032f51884 144 SUPERFAMILY SSF118196 29 143 6.93E-36 T 13-10-2018 IPR036413 YaeB-like superfamily Thivi_1082 8e31bc9d3e97f630930d78d032f51884 144 Gene3D G3DSA:2.40.30.70 23 144 2.3E-32 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily Thivi_1082 8e31bc9d3e97f630930d78d032f51884 144 ProSitePatterns PS01318 TsaA-like domain signature. 97 108 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 348 7.8E-131 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 14 350 36.755 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 SUPERFAMILY SSF52733 7 349 2.09E-115 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 Pfam PF02277 Phosphoribosyltransferase 14 348 1.7E-131 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 Gene3D G3DSA:1.10.1610.10 26 348 1.2E-127 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0717 703a430076b3f54bc22fcb47ec37547d 351 Gene3D G3DSA:3.40.50.10210 58 331 1.2E-127 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SMART SM00889 487 605 6.3E-73 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Pfam PF00679 Elongation factor G C-terminus 607 692 4.3E-30 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Gene3D G3DSA:3.30.230.10 491 694 3.8E-95 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SUPERFAMILY SSF54980 610 696 4.27E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SUPERFAMILY SSF54980 409 487 6.12E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Pfam PF03764 Elongation factor G, domain IV 486 604 7.6E-50 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SUPERFAMILY SSF54211 486 606 8.85E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.742 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SMART SM00838 607 694 6.2E-58 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Pfam PF14492 Elongation Factor G, domain II 411 484 1.9E-35 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Gene3D G3DSA:2.40.30.10 299 407 1.7E-43 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SUPERFAMILY SSF52540 6 288 1.31E-108 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Gene3D G3DSA:3.30.70.870 412 490 1.8E-34 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.3E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.3E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.3E-15 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.4E-18 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 6.0E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.9E-67 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Gene3D G3DSA:3.30.70.240 611 681 3.8E-95 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 Gene3D G3DSA:3.40.50.300 1 298 4.1E-115 T 13-10-2018 Thivi_4198 0f7ac24535cafc9c5c5dc364b8cf7c5a 698 SUPERFAMILY SSF50447 256 409 1.5E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_3255 c60f7ab49dcc269211215d14940f7724 246 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 45 207 1.7E-17 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Thivi_3255 c60f7ab49dcc269211215d14940f7724 246 Gene3D G3DSA:3.40.50.10610 35 213 2.7E-29 T 13-10-2018 Thivi_3255 c60f7ab49dcc269211215d14940f7724 246 SUPERFAMILY SSF159594 43 213 1.1E-31 T 13-10-2018 Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 SUPERFAMILY SSF47413 2 62 3.75E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 Gene3D G3DSA:3.40.390.50 175 235 3.2E-5 T 13-10-2018 Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 Pfam PF06114 IrrE N-terminal-like domain 179 274 4.3E-8 T 13-10-2018 IPR010359 IrrE N-terminal-like domain Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 SMART SM00530 5 60 2.0E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 Gene3D G3DSA:1.10.260.40 1 65 1.2E-14 T 13-10-2018 Thivi_4605 8ab01daf4ad0fd34fe429c44dbf4f35d 359 Pfam PF01381 Helix-turn-helix 6 60 1.9E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_4008 51634932faf23b416a1f692bb3d2493c 358 Pfam PF03969 AFG1-like ATPase 10 355 2.4E-120 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Thivi_4008 51634932faf23b416a1f692bb3d2493c 358 SUPERFAMILY SSF52540 44 195 3.93E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4008 51634932faf23b416a1f692bb3d2493c 358 Gene3D G3DSA:3.40.50.300 19 176 1.4E-16 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 Pfam PF00800 Prephenate dehydratase 98 272 1.6E-60 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Thivi_2123 27505a865651875610775e23bfccc538 364 Pfam PF01842 ACT domain 282 344 3.2E-11 T 13-10-2018 IPR002912 ACT domain Thivi_2123 27505a865651875610775e23bfccc538 364 PIRSF PIRSF001500 2 364 4.4E-137 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Thivi_2123 27505a865651875610775e23bfccc538 364 Gene3D G3DSA:3.30.70.260 273 363 2.4E-26 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 309 316 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Thivi_2123 27505a865651875610775e23bfccc538 364 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 247 269 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Thivi_2123 27505a865651875610775e23bfccc538 364 SUPERFAMILY SSF55021 266 361 1.15E-25 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 Gene3D G3DSA:3.40.190.10 177 261 9.9E-59 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 SMART SM00830 13 95 4.0E-31 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Thivi_2123 27505a865651875610775e23bfccc538 364 SUPERFAMILY SSF48600 8 96 4.58E-21 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Thivi_2123 27505a865651875610775e23bfccc538 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 10 85 5.1E-31 T 13-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Thivi_2123 27505a865651875610775e23bfccc538 364 Gene3D G3DSA:3.40.190.10 99 269 9.9E-59 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 SUPERFAMILY SSF53850 96 279 9.88E-59 T 13-10-2018 Thivi_2123 27505a865651875610775e23bfccc538 364 Pfam PF01817 Chorismate mutase type II 13 92 2.0E-23 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Thivi_2123 27505a865651875610775e23bfccc538 364 Gene3D G3DSA:1.20.59.10 11 97 1.0E-28 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Thivi_3327 01df759143a93e104195f1bc31caae35 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site Thivi_3327 01df759143a93e104195f1bc31caae35 238 SUPERFAMILY SSF55666 151 237 2.49E-24 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3327 01df759143a93e104195f1bc31caae35 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.6E-113 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Thivi_3327 01df759143a93e104195f1bc31caae35 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 46.08 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Thivi_3327 01df759143a93e104195f1bc31caae35 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 6.2E-22 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3327 01df759143a93e104195f1bc31caae35 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 4.7E-10 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3327 01df759143a93e104195f1bc31caae35 238 Gene3D G3DSA:3.30.230.70 9 237 3.2E-60 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Thivi_3327 01df759143a93e104195f1bc31caae35 238 SUPERFAMILY SSF54211 1 181 6.07E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 Gene3D G3DSA:3.40.50.410 385 591 1.4E-27 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 Pfam PF13531 Bacterial extracellular solute-binding protein 45 332 2.3E-25 T 13-10-2018 Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 SMART SM00327 385 587 7.8E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 SUPERFAMILY SSF53850 50 335 4.12E-12 T 13-10-2018 Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 Gene3D G3DSA:3.40.190.10 138 290 3.1E-10 T 13-10-2018 Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 Pfam PF00092 von Willebrand factor type A domain 388 573 7.1E-10 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 Gene3D G3DSA:3.40.190.10 56 335 3.1E-10 T 13-10-2018 Thivi_3560 a128f50299fc5732ea1dab5e08f67e2a 594 SUPERFAMILY SSF53300 387 592 1.34E-19 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.5E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 Gene3D G3DSA:3.40.190.10 87 178 2.9E-13 T 13-10-2018 Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 Pfam PF03466 LysR substrate binding domain 88 271 3.5E-17 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 SUPERFAMILY SSF46785 1 107 2.63E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 Gene3D G3DSA:1.10.10.10 1 86 4.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1717 dee98ff3157d16c51e94bf943492c440 284 SUPERFAMILY SSF53850 89 277 4.34E-23 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.30.565.10 923 1090 2.8E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF47384 847 925 2.35E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00388 859 924 3.9E-27 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00091 701 769 6.3E-5 T 13-10-2018 IPR000014 PAS domain Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.30.450.20 697 768 6.0E-17 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF47226 1357 1507 4.19E-20 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM01049 167 255 2.9E-8 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00073 1418 1512 1.9E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF08447 PAS fold 724 811 2.8E-22 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF00072 Response regulator receiver domain 1107 1223 6.8E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF00072 Response regulator receiver domain 1260 1373 6.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF103190 421 538 3.3E-16 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF55874 913 1082 1.83E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF52172 1257 1381 6.97E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 859 924 3.3E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:1.20.120.160 1405 1514 9.0E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:2.10.70.100 773 820 7.1E-16 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00387 971 1087 2.4E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF17200 Single Cache domain 2 176 302 3.3E-12 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.40.50.12330 1254 1314 7.0E-22 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.30.450.20 169 310 2.6E-21 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF14827 Double sensory domain of two-component sensor kinase 400 650 1.7E-20 T 13-10-2018 IPR029150 Double Cache domain 3 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF52172 1105 1230 2.56E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.40.50.2300 1315 1387 1.2E-16 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SUPERFAMILY SSF55785 709 821 4.89E-27 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 697 825 3.6E-19 T 13-10-2018 IPR000014 PAS domain Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:1.10.287.130 821 922 9.6E-29 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.40.50.12740 1104 1251 1.4E-33 T 13-10-2018 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 971 1086 6.9E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1047 1065 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1071 1084 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1030 1040 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1012 1026 1.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00448 1258 1374 8.4E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00448 1105 1223 2.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 SMART SM00086 776 818 8.7E-12 T 13-10-2018 IPR001610 PAC motif Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Pfam PF01627 Hpt domain 1431 1509 2.7E-9 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0693 cd7085c80f67eac32eeff1096ef592d8 1524 Gene3D G3DSA:3.30.450.20 403 538 4.5E-5 T 13-10-2018 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 Gene3D G3DSA:3.30.860.10 1 92 3.4E-40 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 SUPERFAMILY SSF54570 3 84 2.88E-35 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 PIRSF PIRSF002144 1 92 5.7E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.947 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.7E-22 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 Pfam PF00203 Ribosomal protein S19 3 83 9.8E-37 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4205 aab07f03072455816aac0be86a37ef06 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 1.6E-43 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 17 68 7.9E-15 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Pfam PF01568 Molydopterin dinucleotide binding domain 790 899 5.9E-10 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Gene3D G3DSA:2.20.25.90 11 73 3.0E-17 T 13-10-2018 Thivi_4531 402596a79a9817b92a5d42871218044b 966 SUPERFAMILY SSF50692 783 928 2.49E-30 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_4531 402596a79a9817b92a5d42871218044b 966 SUPERFAMILY SSF53706 15 767 2.62E-151 T 13-10-2018 Thivi_4531 402596a79a9817b92a5d42871218044b 966 SMART SM00926 15 69 2.2E-17 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Pfam PF00384 Molybdopterin oxidoreductase 545 625 1.6E-8 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Pfam PF00384 Molybdopterin oxidoreductase 72 368 7.6E-20 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Gene3D G3DSA:3.40.50.740 74 162 4.6E-13 T 13-10-2018 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Gene3D G3DSA:3.40.50.740 475 652 1.8E-18 T 13-10-2018 Thivi_4531 402596a79a9817b92a5d42871218044b 966 Gene3D G3DSA:2.40.40.20 764 935 9.8E-24 T 13-10-2018 Thivi_0757 41b2f165e645cc6b204daf33bd20a12c 177 Gene3D G3DSA:1.10.60.30 30 104 4.3E-10 T 13-10-2018 Thivi_0757 41b2f165e645cc6b204daf33bd20a12c 177 PIRSF PIRSF016183 2 177 1.1E-41 T 13-10-2018 IPR006839 Ribosome-associated, YjgA Thivi_0757 41b2f165e645cc6b204daf33bd20a12c 177 Pfam PF04751 Protein of unknown function (DUF615) 19 169 1.2E-41 T 13-10-2018 IPR006839 Ribosome-associated, YjgA Thivi_0757 41b2f165e645cc6b204daf33bd20a12c 177 Gene3D G3DSA:1.10.60.30 105 176 6.3E-25 T 13-10-2018 Thivi_0757 41b2f165e645cc6b204daf33bd20a12c 177 SUPERFAMILY SSF158710 31 171 7.98E-35 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 326 340 1.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 356 368 1.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 340 356 1.5E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 Pfam PF00196 Bacterial regulatory proteins, luxR family 326 378 2.6E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 Gene3D G3DSA:1.10.10.10 319 385 3.5E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 SUPERFAMILY SSF46894 323 381 9.18E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 SMART SM00421 323 380 2.1E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_1251 77c8b1edfbcdb0bd6dd6b913a1f6b6fb 386 ProSitePatterns PS00622 LuxR-type HTH domain signature. 340 367 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.3E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 SUPERFAMILY SSF54862 21 123 2.43E-20 T 13-10-2018 Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 Pfam PF02754 Cysteine-rich domain 302 385 3.1E-14 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 Pfam PF02754 Cysteine-rich domain 171 254 6.7E-10 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 Gene3D G3DSA:1.10.1060.10 2 108 8.2E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0675 43186d4b1b0bb015784628a9fba87283 408 PIRSF PIRSF000139 7 407 3.5E-113 T 13-10-2018 Thivi_0243 842d577a026b23b5b8ee146c5aea0d45 277 Gene3D G3DSA:2.40.50.140 186 275 1.5E-6 T 13-10-2018 Thivi_0243 842d577a026b23b5b8ee146c5aea0d45 277 Pfam PF01936 NYN domain 6 160 1.1E-25 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type Thivi_0243 842d577a026b23b5b8ee146c5aea0d45 277 Gene3D G3DSA:3.40.50.1010 2 164 8.4E-29 T 13-10-2018 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 SMART SM01374 1 122 5.1E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-57 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 Gene3D G3DSA:2.40.150.20 1 122 7.2E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.835 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 SUPERFAMILY SSF50193 1 122 1.96E-51 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 5.5E-54 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Thivi_4211 ae53f1653baa8654f00791c8d25d42a9 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Pfam PF00672 HAMP domain 200 248 2.4E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 PIRSF PIRSF003167 2 635 2.3E-163 T 13-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 623 1.7E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 154 1.6E-17 T 13-10-2018 IPR029095 NarX-like, N-terminal Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 SUPERFAMILY SSF55874 499 620 4.45E-13 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 SUPERFAMILY SSF158472 200 250 5.1E-9 T 13-10-2018 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Gene3D G3DSA:3.30.565.10 500 623 4.2E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Gene3D G3DSA:1.20.120.960 44 167 6.7E-8 T 13-10-2018 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Gene3D G3DSA:1.20.1480.50 168 259 1.0E-8 T 13-10-2018 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 SMART SM00387 531 626 2.4E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 SMART SM00304 200 252 2.3E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4248 0948956080cc9a46a4a0680d994fd0c6 659 Pfam PF07730 Histidine kinase 416 490 1.9E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Thivi_1429 ef109b76f7b7ea2e11424c597a6e11f3 419 Gene3D G3DSA:3.10.290.30 291 418 2.0E-16 T 13-10-2018 IPR024047 MM3350-like superfamily Thivi_1429 ef109b76f7b7ea2e11424c597a6e11f3 419 SUPERFAMILY SSF159941 292 417 4.58E-25 T 13-10-2018 IPR024047 MM3350-like superfamily Thivi_1429 ef109b76f7b7ea2e11424c597a6e11f3 419 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 300 414 5.4E-17 T 13-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 Gene3D G3DSA:3.50.50.60 6 340 1.9E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 392 3.4E-123 T 13-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 SUPERFAMILY SSF51905 4 386 6.84E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 296 309 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 Pfam PF01494 FAD binding domain 4 321 3.4E-26 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.4E-16 T 13-10-2018 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 2.4E-16 T 13-10-2018 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 2.4E-16 T 13-10-2018 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 2.4E-16 T 13-10-2018 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 Gene3D G3DSA:3.30.9.50 79 271 1.9E-95 T 13-10-2018 Thivi_3384 d6c2a4aab45fa356844d365e9228c6c2 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 392 5.9E-118 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Thivi_0789 9d1546e95ca74f453a164bfb9593f4a9 93 SUPERFAMILY SSF47413 19 90 2.52E-21 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_0789 9d1546e95ca74f453a164bfb9593f4a9 93 Pfam PF13744 Helix-turn-helix domain 14 89 6.2E-24 T 13-10-2018 IPR039554 HigA2-like, helix-turn-helix domain Thivi_0789 9d1546e95ca74f453a164bfb9593f4a9 93 SMART SM00530 32 90 9.0E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_0789 9d1546e95ca74f453a164bfb9593f4a9 93 Gene3D G3DSA:1.10.260.40 11 93 3.5E-28 T 13-10-2018 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SMART SM01086 655 744 5.5E-39 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Gene3D G3DSA:1.10.8.60 655 752 6.6E-31 T 13-10-2018 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Gene3D G3DSA:1.10.1780.10 1 142 2.9E-45 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Gene3D G3DSA:3.40.50.300 442 653 8.5E-78 T 13-10-2018 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 648 4.6E-47 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 6.3E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 6.3E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 6.3E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 6.3E-37 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 1.3E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SUPERFAMILY SSF52540 440 738 6.04E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.4E-15 T 13-10-2018 IPR004176 Clp, N-terminal Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SUPERFAMILY SSF52540 170 423 1.77E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 325 1.1E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SUPERFAMILY SSF81923 1 141 3.4E-59 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Gene3D G3DSA:3.40.50.300 168 357 1.2E-64 T 13-10-2018 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 Gene3D G3DSA:1.10.8.60 358 440 3.6E-34 T 13-10-2018 Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SMART SM00382 208 352 2.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 SMART SM00382 489 656 1.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4575 9327f38e9522578c6033c356f9e5a2cf 753 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 191 6.6E-62 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 19 32 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 6 184 34.999 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 113 123 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 SUPERFAMILY SSF53178 7 191 1.28E-65 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 Gene3D G3DSA:3.40.50.1470 2 194 1.4E-67 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Thivi_4180 bb2c729d0d3446ba4d24c05bfc71bb06 194 Pfam PF01195 Peptidyl-tRNA hydrolase 8 190 1.8E-55 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Thivi_4290 f5ed3db15c856b9105f6a23ab42226af 116 Pfam PF07007 Lysozyme inhibitor LprI 35 113 1.1E-7 T 13-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 296 8.7E-114 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 296 39.478 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Gene3D G3DSA:3.40.190.10 5 208 5.0E-84 T 13-10-2018 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PRINTS PR00151 Porphobilinogen deaminase signature 75 94 3.1E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PRINTS PR00151 Porphobilinogen deaminase signature 142 159 3.1E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 3.1E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PRINTS PR00151 Porphobilinogen deaminase signature 123 140 3.1E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PRINTS PR00151 Porphobilinogen deaminase signature 44 64 3.1E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 294 6.9E-17 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 211 1.1E-78 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Gene3D G3DSA:3.30.160.40 220 305 2.8E-26 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 SUPERFAMILY SSF54782 219 305 2.62E-25 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 Gene3D G3DSA:3.40.190.10 102 201 5.0E-84 T 13-10-2018 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 SUPERFAMILY SSF53850 4 217 1.32E-84 T 13-10-2018 Thivi_3884 a90eb3e20e9f1a297c60a7a88df9171d 307 PIRSF PIRSF001438 1 307 4.1E-118 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 SUPERFAMILY SSF50494 89 265 3.62E-29 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 Pfam PF13365 Trypsin-like peptidase domain 97 230 8.2E-21 T 13-10-2018 Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 PRINTS PR00834 HtrA/DegQ protease family signature 106 118 9.9E-8 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 PRINTS PR00834 HtrA/DegQ protease family signature 127 147 9.9E-8 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 9.9E-8 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_4276 74d0df84ce39afb64f76ef2216d1718c 298 Gene3D G3DSA:2.40.10.120 33 266 5.2E-28 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PIRSF PIRSF002764 1 223 7.4E-78 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 Pfam PF03379 CcmB protein 6 220 4.4E-76 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 219 4.0E-74 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.4E-60 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 1.4E-60 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.4E-60 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.4E-60 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.4E-60 T 13-10-2018 Thivi_3062 35fc1e935d82d4eb758101fbf07743f0 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 196 219 1.4E-60 T 13-10-2018 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 8.9E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 SUPERFAMILY SSF54980 294 372 6.12E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 SUPERFAMILY SSF52540 1 232 1.66E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Gene3D G3DSA:3.30.70.870 288 369 4.5E-34 T 13-10-2018 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Gene3D G3DSA:3.40.50.300 3 188 2.3E-69 T 13-10-2018 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 176 1.8E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Gene3D G3DSA:3.30.70.3380 370 480 5.1E-39 T 13-10-2018 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 TIGRFAM TIGR01393 lepA: elongation factor 4 6 596 3.6E-290 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 SMART SM00838 403 487 0.0094 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 297.75 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 SUPERFAMILY SSF54980 401 495 1.06E-23 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.2E-50 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Pfam PF00679 Elongation factor G C-terminus 401 487 8.9E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Gene3D G3DSA:2.40.30.10 189 287 5.5E-33 T 13-10-2018 Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Gene3D G3DSA:3.30.70.2570 481 555 6.1E-33 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily Thivi_0606 82b50d4bcc01b92a610d55ad79df1727 600 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.3E-8 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_3905 799460321e5a56915cf55259daf161a9 367 Pfam PF01420 Type I restriction modification DNA specificity domain 32 149 1.6E-6 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_3905 799460321e5a56915cf55259daf161a9 367 Gene3D G3DSA:3.90.220.20 4 161 3.4E-24 T 13-10-2018 Thivi_3905 799460321e5a56915cf55259daf161a9 367 Gene3D G3DSA:3.90.220.20 177 344 2.3E-24 T 13-10-2018 Thivi_3905 799460321e5a56915cf55259daf161a9 367 SUPERFAMILY SSF116734 175 365 1.32E-22 T 13-10-2018 Thivi_3905 799460321e5a56915cf55259daf161a9 367 SUPERFAMILY SSF116734 5 161 4.74E-24 T 13-10-2018 Thivi_2908 c41a622a63d2de77e352dfe19e8286a9 172 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 55 164 9.8E-26 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2908 c41a622a63d2de77e352dfe19e8286a9 172 SUPERFAMILY SSF56770 32 168 4.84E-48 T 13-10-2018 Thivi_2908 c41a622a63d2de77e352dfe19e8286a9 172 Gene3D G3DSA:3.40.50.12280 21 172 8.1E-47 T 13-10-2018 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 Pfam PF01578 Cytochrome C assembly protein 29 182 2.6E-21 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3059 6918c564fee7ee53ccd53e0eaaa62fba 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 5.8E-32 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Thivi_3531 40b1095f6b0851148873000c7ab8b577 349 Pfam PF03864 Phage major capsid protein E 8 347 1.9E-69 T 13-10-2018 IPR005564 Major capsid protein GpE Thivi_3531 40b1095f6b0851148873000c7ab8b577 349 Gene3D G3DSA:3.15.30.10 44 337 1.1E-58 T 13-10-2018 Thivi_3531 40b1095f6b0851148873000c7ab8b577 349 Gene3D G3DSA:3.30.1930.10 166 291 1.1E-58 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 7.8E-16 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 PRINTS PR00419 Adrenodoxin reductase family signature 281 295 7.8E-16 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 7.8E-16 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 7.8E-16 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 SUPERFAMILY SSF46548 539 651 1.15E-18 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Gene3D G3DSA:3.50.50.60 314 416 8.8E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Pfam PF12838 4Fe-4S dicluster domain 597 646 7.6E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 467 2.1E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 SUPERFAMILY SSF51971 145 417 9.42E-49 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 633 644 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Gene3D G3DSA:3.50.50.60 145 267 3.7E-31 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 SUPERFAMILY SSF46548 47 157 2.82E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Gene3D G3DSA:3.30.70.20 582 651 2.4E-10 T 13-10-2018 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 46 134 9.4E-12 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Thivi_0552 8c4dd28949326ee991324d538c3c88b0 654 Gene3D G3DSA:1.10.1060.10 3 144 1.6E-17 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 Gene3D G3DSA:1.20.1510.10 22 219 4.2E-57 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 300 5.9E-23 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 Gene3D G3DSA:3.30.70.1350 220 302 8.7E-27 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 Pfam PF01545 Cation efflux family 27 219 2.8E-41 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 SUPERFAMILY SSF161111 21 220 4.71E-52 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 300 6.0E-67 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_4465 7635ae141ccf7502125d23018dbec40c 309 SUPERFAMILY SSF160240 223 301 3.79E-21 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82714 188 267 1.23E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82866 295 492 9.68E-28 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82693 551 644 3.66E-5 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.70.1430 43 804 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:1.20.1640.10 14 499 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.70.1320 139 327 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82693 43 139 3.53E-16 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.70.1430 554 656 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82866 790 1011 1.02E-45 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 2.1E-16 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.2090.10 183 274 1.8E-240 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:1.20.1640.10 500 1006 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82693 140 326 7.85E-18 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 SUPERFAMILY SSF82714 707 792 1.83E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Pfam PF00873 AcrB/AcrD/AcrF family 7 1007 1.7E-157 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.70.1440 657 857 1.8E-240 T 13-10-2018 Thivi_1397 b6f845530018542ee4efb200924e608d 1029 Gene3D G3DSA:3.30.2090.10 708 796 1.8E-240 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0805 b90ac1e1ca586efff964e5f92f453e37 297 Gene3D G3DSA:3.30.750.160 33 214 1.8E-91 T 13-10-2018 Thivi_0805 b90ac1e1ca586efff964e5f92f453e37 297 Gene3D G3DSA:3.90.79.10 127 288 1.8E-91 T 13-10-2018 Thivi_0805 b90ac1e1ca586efff964e5f92f453e37 297 Pfam PF15916 Domain of unknown function (DUF4743) 16 128 1.5E-21 T 13-10-2018 IPR031804 Domain of unknown function DUF4743 Thivi_0805 b90ac1e1ca586efff964e5f92f453e37 297 SUPERFAMILY SSF55811 111 274 2.3E-17 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_0805 b90ac1e1ca586efff964e5f92f453e37 297 Pfam PF00293 NUDIX domain 146 252 5.2E-6 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_0663 1b02bf720fa32e4d26f2e46f84a8b608 147 SUPERFAMILY SSF49764 26 146 6.07E-29 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_0663 1b02bf720fa32e4d26f2e46f84a8b608 147 Pfam PF00011 Hsp20/alpha crystallin family 53 146 9.5E-20 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Thivi_0663 1b02bf720fa32e4d26f2e46f84a8b608 147 Gene3D G3DSA:2.60.40.790 6 147 4.2E-26 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1440 cf991e8b770c5d67eb3fc13db8bfae22 231 SUPERFAMILY SSF46894 158 230 7.14E-9 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_1440 cf991e8b770c5d67eb3fc13db8bfae22 231 Gene3D G3DSA:3.40.50.12740 13 229 2.6E-43 T 13-10-2018 Thivi_1440 cf991e8b770c5d67eb3fc13db8bfae22 231 Pfam PF00072 Response regulator receiver domain 15 135 2.3E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1440 cf991e8b770c5d67eb3fc13db8bfae22 231 SUPERFAMILY SSF52172 11 146 2.13E-23 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1440 cf991e8b770c5d67eb3fc13db8bfae22 231 SMART SM00448 13 135 1.8E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2653 ebe0259e78fd84edd2c53afc2fa1e46b 140 Gene3D G3DSA:1.10.10.60 10 88 1.4E-11 T 13-10-2018 Thivi_2653 ebe0259e78fd84edd2c53afc2fa1e46b 140 Pfam PF01527 Transposase 7 76 2.1E-14 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Thivi_2653 ebe0259e78fd84edd2c53afc2fa1e46b 140 SUPERFAMILY SSF46689 6 87 9.68E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1299 ebe0259e78fd84edd2c53afc2fa1e46b 140 Gene3D G3DSA:1.10.10.60 10 88 1.4E-11 T 13-10-2018 Thivi_1299 ebe0259e78fd84edd2c53afc2fa1e46b 140 Pfam PF01527 Transposase 7 76 2.1E-14 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Thivi_1299 ebe0259e78fd84edd2c53afc2fa1e46b 140 SUPERFAMILY SSF46689 6 87 9.68E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1533 12b43bc2ec6ece8077a859f2a62a8621 152 SUPERFAMILY SSF47413 2 70 2.95E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1533 12b43bc2ec6ece8077a859f2a62a8621 152 Gene3D G3DSA:1.10.260.40 1 67 7.4E-18 T 13-10-2018 Thivi_1533 12b43bc2ec6ece8077a859f2a62a8621 152 SMART SM00530 7 63 3.0E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1533 12b43bc2ec6ece8077a859f2a62a8621 152 Pfam PF01381 Helix-turn-helix 9 62 3.2E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_3650 393f3c1fbad5768191167877481479a7 72 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 4 69 5.4E-21 T 13-10-2018 IPR009727 NifT/FixU GO:0009399 Thivi_3650 393f3c1fbad5768191167877481479a7 72 Gene3D G3DSA:2.40.50.240 2 69 2.7E-20 T 13-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily Thivi_3650 393f3c1fbad5768191167877481479a7 72 Pfam PF06988 NifT/FixU protein 1 66 2.0E-22 T 13-10-2018 IPR009727 NifT/FixU GO:0009399 Thivi_3650 393f3c1fbad5768191167877481479a7 72 SUPERFAMILY SSF159203 2 69 4.71E-19 T 13-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily Thivi_2167 1836af4d3fd01eee36924c54b5fbbf8f 342 PIRSF PIRSF029120 1 340 4.0E-66 T 13-10-2018 IPR011226 ATP-grasp family Thivi_2167 1836af4d3fd01eee36924c54b5fbbf8f 342 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 3 335 8.0E-113 T 13-10-2018 IPR011226 ATP-grasp family Thivi_2167 1836af4d3fd01eee36924c54b5fbbf8f 342 SUPERFAMILY SSF56059 107 310 2.05E-24 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.40.50.720 4 133 1.2E-39 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.40.50.261 134 294 8.0E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SUPERFAMILY SSF52210 133 296 1.44E-41 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Pfam PF13380 CoA binding domain 15 138 2.6E-22 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SUPERFAMILY SSF55729 734 879 6.35E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.40.50.261 298 463 8.1E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SMART SM00881 9 104 2.1E-28 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Pfam PF13549 ATP-grasp domain 482 703 3.0E-72 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.30.1490.20 508 585 1.7E-66 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SUPERFAMILY SSF56059 492 705 3.77E-32 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SUPERFAMILY SSF52210 300 455 1.15E-44 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.40.630.30 720 888 4.0E-42 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 SUPERFAMILY SSF51735 4 143 1.47E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 155 292 8.5E-54 T 13-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Gene3D G3DSA:3.30.470.20 490 701 1.7E-66 T 13-10-2018 Thivi_0599 af594fb8ac0ba425e4eead157bba5133 892 Pfam PF00583 Acetyltransferase (GNAT) family 791 874 5.7E-7 T 13-10-2018 IPR000182 GNAT domain Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 Gene3D G3DSA:1.10.1040.10 206 334 1.2E-34 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 Pfam PF02558 Ketopantoate reductase PanE/ApbA 34 180 1.6E-31 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 32 331 8.4E-69 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 SUPERFAMILY SSF51735 33 185 2.63E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 Gene3D G3DSA:3.40.50.720 31 203 1.0E-43 T 13-10-2018 Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 207 326 5.3E-24 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Thivi_3844 68ad27f704a77852ab2881bd1994f332 335 SUPERFAMILY SSF48179 207 329 4.08E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_4549 c56e9efcff4bccb5c94dad245285a5a4 261 Pfam PF01875 Memo-like protein 6 258 3.3E-50 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Thivi_4549 c56e9efcff4bccb5c94dad245285a5a4 261 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 260 4.3E-80 T 13-10-2018 Thivi_4549 c56e9efcff4bccb5c94dad245285a5a4 261 Gene3D G3DSA:3.40.830.10 2 261 2.2E-66 T 13-10-2018 Thivi_4549 c56e9efcff4bccb5c94dad245285a5a4 261 Hamap MF_00055 MEMO1 family protein . 3 261 48.605 T 13-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 Thivi_3334 3875ecd7b073943d85c5ffda0c19c412 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 187 3.2E-60 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3334 3875ecd7b073943d85c5ffda0c19c412 213 SUPERFAMILY SSF53271 2 211 6.49E-49 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_3334 3875ecd7b073943d85c5ffda0c19c412 213 Pfam PF00156 Phosphoribosyl transferase domain 45 168 5.2E-10 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Thivi_3334 3875ecd7b073943d85c5ffda0c19c412 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.499 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3334 3875ecd7b073943d85c5ffda0c19c412 213 Gene3D G3DSA:3.40.50.2020 1 213 1.8E-73 T 13-10-2018 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SMART SM00267 313 474 5.3E-14 T 13-10-2018 IPR000160 GGDEF domain Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Pfam PF11849 Domain of unknown function (DUF3369) 153 320 2.2E-50 T 13-10-2018 IPR021800 Domain of unknown function DUF3369 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SMART SM00448 31 153 0.0032 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Gene3D G3DSA:3.20.20.450 488 741 3.6E-95 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 469 8.8E-16 T 13-10-2018 IPR000160 GGDEF domain Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Pfam PF00563 EAL domain 491 725 1.4E-66 T 13-10-2018 IPR001633 EAL domain Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SUPERFAMILY SSF141868 490 737 2.09E-85 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Pfam PF00072 Response regulator receiver domain 33 142 8.1E-7 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Gene3D G3DSA:3.40.50.2300 23 172 1.7E-14 T 13-10-2018 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 Gene3D G3DSA:3.30.70.270 318 487 3.8E-26 T 13-10-2018 Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SUPERFAMILY SSF52172 29 177 1.84E-14 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 323 472 6.7E-12 T 13-10-2018 IPR000160 GGDEF domain Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SMART SM00052 484 730 6.1E-110 T 13-10-2018 IPR001633 EAL domain Thivi_0039 e2e1170ce64e464c4d6218379cd3e396 742 SUPERFAMILY SSF55073 331 475 1.02E-19 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Pfam PF00175 Oxidoreductase NAD-binding domain 465 570 8.6E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Gene3D G3DSA:1.20.990.10 288 392 1.3E-60 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00369 Flavodoxin signature 117 128 4.6E-15 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00369 Flavodoxin signature 173 192 4.6E-15 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00369 Flavodoxin signature 69 82 4.6E-15 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00369 Flavodoxin signature 149 159 4.6E-15 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Gene3D G3DSA:3.40.50.80 453 606 2.6E-49 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Gene3D G3DSA:3.40.50.360 59 220 2.1E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 18 606 1.1E-206 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Gene3D G3DSA:2.40.30.10 241 447 1.3E-60 T 13-10-2018 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 8.6E-23 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 SUPERFAMILY SSF52218 66 211 9.14E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 SUPERFAMILY SSF63380 236 454 5.1E-53 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 PIRSF PIRSF000207 10 606 7.3E-207 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Pfam PF00667 FAD binding domain 239 432 5.2E-20 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 Pfam PF00258 Flavodoxin 70 190 4.2E-33 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Thivi_1405 bea1ab9f0a5a880ef0a8de3f5f2502dc 606 SUPERFAMILY SSF52343 452 606 5.5E-46 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0565 a59b94e6958b53e6e91d9f5d8d39ff51 349 Gene3D G3DSA:3.75.10.10 1 342 3.3E-119 T 13-10-2018 Thivi_0565 a59b94e6958b53e6e91d9f5d8d39ff51 349 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 3 339 6.0E-109 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Thivi_0565 a59b94e6958b53e6e91d9f5d8d39ff51 349 SUPERFAMILY SSF55909 3 339 6.96E-116 T 13-10-2018 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 585 5.3E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SMART SM00260 578 717 6.2E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 3.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SMART SM01231 340 400 1.9E-9 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Pfam PF01627 Hpt domain 6 91 8.5E-17 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SMART SM00073 2 100 8.0E-28 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Gene3D G3DSA:3.30.565.10 401 585 2.5E-58 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Gene3D G3DSA:2.30.30.40 586 713 3.6E-37 T 13-10-2018 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Gene3D G3DSA:1.10.287.560 340 400 1.5E-8 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Pfam PF01584 CheW-like domain 591 717 2.8E-25 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SUPERFAMILY SSF47226 4 124 4.97E-29 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 342 398 5.6E-7 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SMART SM00387 445 586 7.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Gene3D G3DSA:1.20.120.160 1 139 4.1E-35 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SUPERFAMILY SSF50341 585 716 1.7E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SUPERFAMILY SSF55874 402 584 6.02E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 SUPERFAMILY SSF47384 341 401 3.69E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0310 a11827d28ae3db017f7298149e3e2323 734 Gene3D G3DSA:2.40.50.180 609 672 3.6E-37 T 13-10-2018 Thivi_2023 b98e33408dca86e329f8d0d8e2a54a9c 421 SUPERFAMILY SSF53756 1 417 1.05E-73 T 13-10-2018 Thivi_2023 b98e33408dca86e329f8d0d8e2a54a9c 421 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 262 400 1.8E-8 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 Thivi_2023 b98e33408dca86e329f8d0d8e2a54a9c 421 Gene3D G3DSA:3.40.50.2000 3 236 6.4E-84 T 13-10-2018 Thivi_2023 b98e33408dca86e329f8d0d8e2a54a9c 421 Gene3D G3DSA:3.40.50.2000 237 403 6.4E-84 T 13-10-2018 Thivi_2023 b98e33408dca86e329f8d0d8e2a54a9c 421 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 133 3.3E-8 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_1216 ce7783903686db49564553faba30c333 371 Pfam PF01966 HD domain 197 318 9.9E-17 T 13-10-2018 IPR006674 HD domain Thivi_1216 ce7783903686db49564553faba30c333 371 SMART SM00448 28 142 1.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1216 ce7783903686db49564553faba30c333 371 SUPERFAMILY SSF52172 28 180 1.99E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1216 ce7783903686db49564553faba30c333 371 Gene3D G3DSA:1.10.3210.10 169 371 1.5E-74 T 13-10-2018 Thivi_1216 ce7783903686db49564553faba30c333 371 Pfam PF00072 Response regulator receiver domain 30 142 1.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1216 ce7783903686db49564553faba30c333 371 SUPERFAMILY SSF109604 174 359 1.11E-41 T 13-10-2018 Thivi_1216 ce7783903686db49564553faba30c333 371 SMART SM00471 191 328 6.4E-7 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1216 ce7783903686db49564553faba30c333 371 Gene3D G3DSA:3.40.50.2300 22 160 8.6E-30 T 13-10-2018 Thivi_4127 9acafd3a71c7b819b40caa50d442612d 414 PIRSF PIRSF003085 26 414 8.0E-122 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Thivi_4127 9acafd3a71c7b819b40caa50d442612d 414 Gene3D G3DSA:3.40.50.150 137 408 7.5E-94 T 13-10-2018 Thivi_4127 9acafd3a71c7b819b40caa50d442612d 414 SUPERFAMILY SSF53335 139 403 9.73E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4127 9acafd3a71c7b819b40caa50d442612d 414 Pfam PF02353 Mycolic acid cyclopropane synthetase 130 399 2.5E-80 T 13-10-2018 Thivi_0352 aa3dfa2281adfac61c4f4917aca4c1d9 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Thivi_0352 aa3dfa2281adfac61c4f4917aca4c1d9 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 234 2.8E-10 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0352 aa3dfa2281adfac61c4f4917aca4c1d9 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 3 281 2.5E-116 T 13-10-2018 IPR022522 Flagellar motor stator, MotA Thivi_2669 66672409e59ab3dab880342a2b871c20 249 SUPERFAMILY SSF46565 194 247 8.5E-15 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_2669 66672409e59ab3dab880342a2b871c20 249 SMART SM00271 197 249 3.9E-5 T 13-10-2018 IPR001623 DnaJ domain Thivi_2669 66672409e59ab3dab880342a2b871c20 249 Gene3D G3DSA:1.10.287.110 189 249 7.9E-19 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Gene3D G3DSA:3.30.450.20 415 535 1.1E-19 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SUPERFAMILY SSF58104 599 880 5.23E-73 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Gene3D G3DSA:1.20.1480.50 319 414 2.2E-5 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SUPERFAMILY SSF55785 20 115 3.14E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SMART SM00086 80 121 7.8E-5 T 13-10-2018 IPR001610 PAC motif Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Gene3D G3DSA:1.10.287.950 579 881 1.3E-85 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Gene3D G3DSA:3.30.450.20 15 137 2.8E-26 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SMART SM00304 579 631 0.12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SMART SM00304 357 409 0.0083 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SMART SM00283 632 879 6.6E-91 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 691 847 3.9E-54 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 SUPERFAMILY SSF158472 357 404 6.15E-5 T 13-10-2018 Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 114 1.7E-14 T 13-10-2018 IPR000014 PAS domain Thivi_0439 6667599d920bf4495cd9d68e27f6ab36 942 Pfam PF08447 PAS fold 31 114 2.9E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 SUPERFAMILY SSF55874 394 542 1.03E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 2.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 2.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 2.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 SMART SM00387 435 544 2.9E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 541 4.2E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 Gene3D G3DSA:3.30.450.20 205 313 1.4E-6 T 13-10-2018 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 SMART SM00388 327 393 1.0E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 Pfam PF00512 His Kinase A (phospho-acceptor) domain 327 391 1.2E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 SUPERFAMILY SSF47384 315 390 3.53E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 Gene3D G3DSA:1.10.287.130 316 392 1.0E-14 T 13-10-2018 Thivi_3289 5c4fec78b6d260bd5ad55be45cec359a 544 Gene3D G3DSA:3.30.565.10 393 544 2.5E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 Gene3D G3DSA:2.170.230.10 152 223 3.4E-70 T 13-10-2018 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 Pfam PF10502 Signal peptidase, peptidase S26 223 261 1.9E-4 T 13-10-2018 IPR019533 Peptidase S26 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 Gene3D G3DSA:2.10.109.10 75 264 3.4E-70 T 13-10-2018 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 ProSitePatterns PS00761 Signal peptidases I signature 3. 229 242 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 263 2.6E-49 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 224 243 2.0E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 141 153 2.0E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 93 2.0E-25 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 ProSitePatterns PS00501 Signal peptidases I serine active site. 86 93 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 ProSitePatterns PS00760 Signal peptidases I lysine active site. 143 155 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 Pfam PF00717 Peptidase S24-like 83 165 1.7E-21 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Thivi_0607 4e879f87a2639e2a7fb798ec04314108 283 SUPERFAMILY SSF51306 75 268 3.09E-67 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_2345 fbfcc8677a43bf9aaae7793c0913c3a3 51 Gene3D G3DSA:3.30.160.250 2 50 2.7E-7 T 13-10-2018 Thivi_2345 fbfcc8677a43bf9aaae7793c0913c3a3 51 SUPERFAMILY SSF143100 2 48 7.85E-12 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_4601 d385675d4d3374f26adcc5b456c10319 264 Gene3D G3DSA:3.30.2010.10 57 145 1.8E-5 T 13-10-2018 Thivi_4601 d385675d4d3374f26adcc5b456c10319 264 Pfam PF01435 Peptidase family M48 67 250 1.6E-41 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Thivi_2264 e21b4c58ac1128d0c7e85ad913357a3b 565 SUPERFAMILY SSF58104 91 389 4.62E-67 T 13-10-2018 Thivi_2264 e21b4c58ac1128d0c7e85ad913357a3b 565 SMART SM00283 127 388 1.3E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2264 e21b4c58ac1128d0c7e85ad913357a3b 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 171 353 5.6E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2264 e21b4c58ac1128d0c7e85ad913357a3b 565 Gene3D G3DSA:1.10.287.950 60 390 2.8E-66 T 13-10-2018 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 SUPERFAMILY SSF140490 330 424 1.44E-37 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 16 418 1.1E-191 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Gene3D G3DSA:1.20.1440.230 331 425 6.2E-33 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 SUPERFAMILY SSF142019 21 243 5.23E-86 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Pfam PF10531 SLBB domain 247 295 1.1E-14 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 346 357 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Gene3D G3DSA:3.10.20.600 236 330 4.7E-32 T 13-10-2018 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 52 223 1.8E-48 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 SUPERFAMILY SSF142984 245 327 4.71E-25 T 13-10-2018 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 SMART SM00928 333 378 7.4E-27 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Gene3D G3DSA:3.40.50.11540 57 235 1.3E-81 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 336 416 7.9E-31 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3917 aa846c78b225f9bf50bdc78ce5770cb5 427 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 171 186 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 Pfam PF00106 short chain dehydrogenase 8 194 5.5E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.9E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.3E-25 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 Gene3D G3DSA:3.40.50.720 1 264 1.1E-72 T 13-10-2018 Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 180 0.0043 T 13-10-2018 Thivi_3032 608a3f49654f0c9a5da69efbed8ee7b0 264 SUPERFAMILY SSF51735 1 260 4.98E-67 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4595 4b552261626a71f35244143cda406dd3 377 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 38 368 28.53 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Thivi_4595 4b552261626a71f35244143cda406dd3 377 Gene3D G3DSA:1.10.10.10 26 120 1.9E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4595 4b552261626a71f35244143cda406dd3 377 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 46 110 4.6E-7 T 13-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 Thivi_4595 4b552261626a71f35244143cda406dd3 377 Gene3D G3DSA:3.30.450.40 142 372 1.6E-44 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_4595 4b552261626a71f35244143cda406dd3 377 Pfam PF01628 HrcA protein C terminal domain 141 361 4.4E-60 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Thivi_4595 4b552261626a71f35244143cda406dd3 377 Gene3D G3DSA:3.30.390.60 164 266 1.6E-44 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Thivi_4595 4b552261626a71f35244143cda406dd3 377 PIRSF PIRSF005485 37 377 4.7E-107 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Thivi_4595 4b552261626a71f35244143cda406dd3 377 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 40 374 5.6E-99 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Thivi_4595 4b552261626a71f35244143cda406dd3 377 SUPERFAMILY SSF55781 108 376 3.33E-61 T 13-10-2018 Thivi_4595 4b552261626a71f35244143cda406dd3 377 SUPERFAMILY SSF46785 40 119 1.64E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2018 42afc002f69c35af305982964f8967d9 234 Pfam PF13460 NAD(P)H-binding 7 208 2.7E-44 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_2018 42afc002f69c35af305982964f8967d9 234 Gene3D G3DSA:3.40.50.720 2 223 3.8E-47 T 13-10-2018 Thivi_2018 42afc002f69c35af305982964f8967d9 234 SUPERFAMILY SSF51735 2 219 9.27E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0056 daee5b7e66097d5f6b1eb9f8536ad8fc 484 Pfam PF02386 Cation transport protein 40 478 7.1E-67 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Thivi_0056 daee5b7e66097d5f6b1eb9f8536ad8fc 484 PIRSF PIRSF006247 1 484 1.2E-167 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Thivi_1713 274ffbb6a1526ea6c7f029d59023c4ea 842 Pfam PF02687 FtsX-like permease family 287 385 4.0E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_1713 274ffbb6a1526ea6c7f029d59023c4ea 842 Pfam PF02687 FtsX-like permease family 739 832 2.6E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_1713 274ffbb6a1526ea6c7f029d59023c4ea 842 Pfam PF12704 MacB-like periplasmic core domain 20 231 6.5E-9 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_1713 274ffbb6a1526ea6c7f029d59023c4ea 842 Pfam PF12704 MacB-like periplasmic core domain 480 681 1.6E-7 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF143517 1012 1163 7.85E-42 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 43 1126 28.016 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.30.2060.10 139 224 1.2E-109 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.90.1150.50 1022 1164 2.1E-43 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SMART SM00490 843 927 5.4E-15 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF141259 487 565 7.85E-25 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SMART SM00982 1025 1125 4.8E-47 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF52540 540 801 2.49E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.40.50.300 559 798 6.9E-235 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.40.50.300 495 1007 6.9E-235 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:2.30.30.840 500 558 6.9E-235 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Pfam PF00271 Helicase conserved C-terminal domain 823 926 5.9E-15 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.40.50.11180 32 342 1.2E-109 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SMART SM00487 617 804 2.0E-34 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Pfam PF03461 TRCF domain 1027 1119 3.3E-27 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF52540 365 483 4.21E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Pfam PF02559 CarD-like/TRCF domain 497 592 4.4E-25 T 13-10-2018 IPR003711 CarD-like/TRCF domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF52540 21 346 7.61E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Gene3D G3DSA:3.40.50.11140 369 470 1.4E-14 T 13-10-2018 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SMART SM01058 496 593 9.6E-51 T 13-10-2018 IPR003711 CarD-like/TRCF domain Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1099 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 Pfam PF00270 DEAD/DEAH box helicase 622 782 1.6E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_1226 8a366c68d7737270060906a6ef402cd9 1164 SUPERFAMILY SSF52540 799 1007 5.18E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 Pfam PF01416 tRNA pseudouridine synthase 146 248 8.3E-31 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 Pfam PF01416 tRNA pseudouridine synthase 11 106 7.2E-11 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 SUPERFAMILY SSF55120 5 254 4.75E-88 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 Gene3D G3DSA:3.30.70.580 3 108 2.3E-38 T 13-10-2018 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 241 9.4E-65 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 PIRSF PIRSF001430 3 260 6.6E-77 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 4 247 34.412 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_0919 7a48cbfd2afc57e6a434ed3a826214ac 268 Gene3D G3DSA:3.30.70.660 109 246 3.0E-48 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 11 30 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 162 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 36 49 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 98 114 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 182 199 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 218 230 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 246 268 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 126 143 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 164 180 1.2E-76 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 Pfam PF00365 Phosphofructokinase 8 281 1.9E-101 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 6 325 40.214 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 ProSitePatterns PS00433 Phosphofructokinase signature. 250 268 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 Gene3D G3DSA:3.40.50.450 8 285 3.1E-99 T 13-10-2018 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 Gene3D G3DSA:3.40.50.460 148 258 3.1E-99 T 13-10-2018 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 SUPERFAMILY SSF53784 5 323 2.35E-106 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3405 fc0fced8c3987a509dc9b67f6cb79548 326 PIRSF PIRSF000532 5 324 4.9E-106 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Thivi_3962 2e9f42dbe676a82ddac9d0d35dcf483d 306 Pfam PF06189 5'-nucleotidase 43 305 1.2E-109 T 13-10-2018 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821|Reactome: R-HSA-74259 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 SMART SM01274 87 267 2.6E-93 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 Gene3D G3DSA:3.40.50.10380 21 274 2.4E-109 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 SMART SM00919 277 530 6.7E-117 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 Pfam PF00390 Malic enzyme, N-terminal domain 88 267 9.4E-70 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 248 266 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 189 211 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 153 182 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 304 320 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 273 289 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 407 423 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PRINTS PR00072 Malic enzyme signature 93 117 9.6E-71 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 PIRSF PIRSF000106 2 562 2.2E-220 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 SUPERFAMILY SSF51735 277 560 1.97E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 Gene3D G3DSA:3.40.50.720 275 562 1.3E-116 T 13-10-2018 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 ProSitePatterns PS00331 Malic enzymes signature. 273 289 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 Pfam PF03949 Malic enzyme, NAD binding domain 277 529 2.8E-100 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Thivi_2510 2762d4447a6ad5a11a30366a95079d54 562 SUPERFAMILY SSF53223 18 276 1.44E-95 T 13-10-2018 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 PRINTS PR00045 Sigma-54 factor signature 467 485 1.5E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 PRINTS PR00045 Sigma-54 factor signature 203 220 1.5E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 PRINTS PR00045 Sigma-54 factor signature 393 405 1.5E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 PRINTS PR00045 Sigma-54 factor signature 409 420 1.5E-30 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 491 9.8E-146 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 Gene3D G3DSA:1.10.10.60 434 491 2.7E-23 T 13-10-2018 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 381 400 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 472 479 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 1.1E-14 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 PIRSF PIRSF000774 1 494 6.3E-153 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 Gene3D G3DSA:1.10.10.1330 134 262 5.2E-21 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Thivi_2234 bb421c402a387baa86771d803d7770a2 494 Pfam PF04963 Sigma-54 factor, core binding domain 131 320 1.4E-57 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Thivi_2234 bb421c402a387baa86771d803d7770a2 494 Pfam PF04552 Sigma-54, DNA binding domain 335 492 1.8E-68 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 Gene3D G3DSA:1.10.1610.10 26 348 1.4E-120 T 13-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 SUPERFAMILY SSF52733 6 349 4.45E-110 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 14 350 35.5 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 Gene3D G3DSA:3.40.50.10210 58 331 1.4E-120 T 13-10-2018 Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 348 5.9E-125 T 13-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_1672 2666ca3bbff0dbaff343eeef68c94bfc 351 Pfam PF02277 Phosphoribosyltransferase 14 348 1.3E-124 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0809 414302bab83947a76c2dbc5c9d99f952 140 SUPERFAMILY SSF110916 15 100 6.15E-12 T 13-10-2018 Thivi_0809 414302bab83947a76c2dbc5c9d99f952 140 Pfam PF00472 RF-1 domain 8 132 5.0E-22 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_0809 414302bab83947a76c2dbc5c9d99f952 140 Gene3D G3DSA:3.30.160.20 1 138 2.4E-41 T 13-10-2018 Thivi_0809 414302bab83947a76c2dbc5c9d99f952 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 164 2.8E-64 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 159 3.6E-29 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 Gene3D G3DSA:3.30.160.20 4 75 8.2E-30 T 13-10-2018 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 SUPERFAMILY SSF54768 10 78 7.64E-23 T 13-10-2018 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 76 8.2E-27 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 34.109 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 SUPERFAMILY SSF54211 82 161 2.45E-24 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4218 2ff55099820bc03c4bd1e7ceb62a03b5 168 Gene3D G3DSA:3.30.230.10 76 168 5.3E-35 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SMART SM00116 146 200 6.7 T 13-10-2018 IPR000644 CBS domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SMART SM00116 211 259 0.026 T 13-10-2018 IPR000644 CBS domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Gene3D G3DSA:3.10.580.10 135 263 3.8E-39 T 13-10-2018 Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SUPERFAMILY SSF54631 139 279 1.26E-29 T 13-10-2018 Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Gene3D G3DSA:1.10.357.20 279 452 2.5E-47 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Pfam PF00571 CBS domain 204 258 2.3E-7 T 13-10-2018 IPR000644 CBS domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Pfam PF00571 CBS domain 140 198 6.5E-8 T 13-10-2018 IPR000644 CBS domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SMART SM00924 36 139 3.3E-35 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 452 1.8E-91 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Pfam PF01769 Divalent cation transporter 324 445 9.4E-26 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Pfam PF03448 MgtE intracellular N domain 36 137 6.4E-25 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SUPERFAMILY SSF161093 282 452 1.44E-48 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 Gene3D G3DSA:1.25.60.10 9 134 1.7E-18 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily Thivi_2243 c2a3d9416a67fbc5fc9f98dbeb9af148 453 SUPERFAMILY SSF158791 13 136 4.97E-27 T 13-10-2018 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 SUPERFAMILY SSF88659 186 277 2.62E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 247 273 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 Gene3D G3DSA:1.20.140.160 136 279 4.5E-17 T 13-10-2018 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 Pfam PF04545 Sigma-70, region 4 224 274 5.3E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 Gene3D G3DSA:1.10.601.10 11 119 1.3E-26 T 13-10-2018 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 SUPERFAMILY SSF88946 9 119 5.49E-39 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 PRINTS PR00046 Major sigma-70 factor signature 74 87 1.1E-17 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 PRINTS PR00046 Major sigma-70 factor signature 228 240 1.1E-17 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 PRINTS PR00046 Major sigma-70 factor signature 247 262 1.1E-17 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 PRINTS PR00046 Major sigma-70 factor signature 262 273 1.1E-17 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 Pfam PF04542 Sigma-70 region 2 50 119 1.1E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 279 48.096 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 12 277 8.2E-120 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_0216 fee537fce415a02a8c35a60bc20ff893 279 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 277 3.4E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Thivi_2880 ab43d0fc5df3b9a6742e674d204b7da8 194 Pfam PF13671 AAA domain 11 137 3.1E-6 T 13-10-2018 Thivi_2880 ab43d0fc5df3b9a6742e674d204b7da8 194 Gene3D G3DSA:3.40.50.300 1 157 2.6E-21 T 13-10-2018 Thivi_2880 ab43d0fc5df3b9a6742e674d204b7da8 194 SUPERFAMILY SSF52540 5 140 9.62E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 SMART SM00847 476 566 4.1E-36 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 10 619 2.3E-281 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Pfam PF04408 Helicase associated domain (HA2) 479 564 2.7E-20 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Pfam PF11898 Domain of unknown function (DUF3418) 758 1367 5.5E-211 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Gene3D G3DSA:1.20.120.1080 460 558 1.8E-20 T 13-10-2018 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 SUPERFAMILY SSF52540 71 592 4.94E-99 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Gene3D G3DSA:3.40.50.300 39 262 2.7E-69 T 13-10-2018 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 SMART SM00490 316 416 1.5E-12 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 SMART SM00382 89 396 1.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Gene3D G3DSA:3.40.50.300 263 434 4.8E-53 T 13-10-2018 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 669 744 1.5E-15 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 SMART SM00487 72 269 2.4E-22 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3351 841616fceff0cf90b94ec742f521c2ba 1371 Pfam PF00271 Helicase conserved C-terminal domain 295 415 3.8E-9 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4299 e342274f208e5dd8a9cd26ffee608547 233 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 35 232 24.581 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Thivi_4299 e342274f208e5dd8a9cd26ffee608547 233 Gene3D G3DSA:2.50.20.10 46 227 8.3E-45 T 13-10-2018 Thivi_4299 e342274f208e5dd8a9cd26ffee608547 233 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 34 220 2.4E-17 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Thivi_4299 e342274f208e5dd8a9cd26ffee608547 233 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 60 222 1.8E-43 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Thivi_4299 e342274f208e5dd8a9cd26ffee608547 233 SUPERFAMILY SSF89392 50 222 1.26E-39 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Thivi_4512 397161185f210fb7ff1c17803b895853 188 Pfam PF01930 Domain of unknown function DUF83 21 180 6.1E-9 T 13-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Thivi_4512 397161185f210fb7ff1c17803b895853 188 Gene3D G3DSA:3.90.320.10 10 183 3.8E-9 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Thivi_4512 397161185f210fb7ff1c17803b895853 188 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 18 187 2.0E-30 T 13-10-2018 IPR013343 CRISPR-associated protein Cas4 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Pfam PF00270 DEAD/DEAH box helicase 301 419 8.4E-15 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 SMART SM00487 276 470 7.1E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Gene3D G3DSA:3.40.50.300 226 461 1.2E-79 T 13-10-2018 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 SUPERFAMILY SSF52540 301 660 3.88E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Pfam PF17191 RecG wedge domain 20 180 1.5E-17 T 13-10-2018 IPR033454 RecG, wedge domain Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Pfam PF00271 Helicase conserved C-terminal domain 492 598 3.0E-15 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 SUPERFAMILY SSF52540 191 464 2.3E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Gene3D G3DSA:1.10.150.20 12 52 1.3E-6 T 13-10-2018 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 SUPERFAMILY SSF50249 18 185 4.28E-35 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Gene3D G3DSA:2.40.50.140 56 151 7.1E-9 T 13-10-2018 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 Gene3D G3DSA:3.40.50.300 468 640 8.7E-50 T 13-10-2018 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 675 3.6E-213 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Thivi_4154 0d4aff309c05ce47f80747a61c274804 703 SMART SM00490 515 599 1.3E-19 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_1231 e68ee97ade8ae0f74fbfeb54a88b422c 241 Gene3D G3DSA:2.40.10.120 1 209 3.3E-9 T 13-10-2018 Thivi_1231 e68ee97ade8ae0f74fbfeb54a88b422c 241 SUPERFAMILY SSF50494 3 205 1.93E-16 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 1.4E-21 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 SUPERFAMILY SSF55347 135 356 2.24E-74 T 13-10-2018 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 SMART SM00859 3 123 4.4E-28 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 Gene3D G3DSA:3.30.360.10 141 352 2.2E-79 T 13-10-2018 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 SUPERFAMILY SSF51735 1 148 5.42E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 Gene3D G3DSA:3.40.50.720 1 140 3.4E-54 T 13-10-2018 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 369 5.5E-183 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 263 277 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 PIRSF PIRSF000148 1 371 1.2E-64 T 13-10-2018 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 355 6.6E-55 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_0921 bc42a8523f533bd7d358525b3ad88838 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 369 33.179 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 Gene3D G3DSA:1.10.260.40 77 140 4.9E-6 T 13-10-2018 Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 SUPERFAMILY SSF143100 4 64 3.4E-12 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 Gene3D G3DSA:3.30.160.250 3 72 2.4E-12 T 13-10-2018 Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 64 1.2E-7 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 86 135 3.3E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_2381 300bfb6f618e6e647afe19c683ba0e68 151 SUPERFAMILY SSF47413 84 138 6.19E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_3040 7013148491080e04fea42e6a9355cc21 187 Hamap MF_00146 dCTP deaminase [dcd]. 2 187 28.114 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Thivi_3040 7013148491080e04fea42e6a9355cc21 187 Pfam PF00692 dUTPase 78 183 9.6E-8 T 13-10-2018 IPR029054 dUTPase-like Thivi_3040 7013148491080e04fea42e6a9355cc21 187 SUPERFAMILY SSF51283 3 186 6.54E-52 T 13-10-2018 IPR036157 dUTPase-like superfamily Thivi_3040 7013148491080e04fea42e6a9355cc21 187 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 186 7.7E-47 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Thivi_3040 7013148491080e04fea42e6a9355cc21 187 Gene3D G3DSA:2.70.40.10 1 158 2.2E-48 T 13-10-2018 IPR036157 dUTPase-like superfamily Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 SUPERFAMILY SSF46785 9 103 6.94E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 8.7E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 8.7E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 8.7E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 Pfam PF01022 Bacterial regulatory protein, arsR family 29 72 4.7E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 SMART SM00418 21 99 4.4E-26 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_3688 d07f62217aee4f1d117a97e2635ce628 111 Gene3D G3DSA:1.10.10.10 7 104 1.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Gene3D G3DSA:3.90.550.10 831 1002 2.0E-9 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 SUPERFAMILY SSF53448 828 971 5.53E-8 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Pfam PF13439 Glycosyltransferase Family 4 295 510 2.0E-7 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 SUPERFAMILY SSF53756 1363 1626 9.94E-8 T 13-10-2018 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Pfam PF00535 Glycosyl transferase family 2 8 124 1.8E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 SUPERFAMILY SSF53448 1026 1274 6.96E-18 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Pfam PF13692 Glycosyl transferases group 1 526 660 1.6E-14 T 13-10-2018 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Gene3D G3DSA:3.40.50.2000 519 673 4.5E-21 T 13-10-2018 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Gene3D G3DSA:3.90.550.10 1 227 6.9E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Gene3D G3DSA:3.90.550.10 1016 1251 9.7E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 SUPERFAMILY SSF53448 2 252 1.21E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 Gene3D G3DSA:3.40.50.2000 1475 1614 2.6E-7 T 13-10-2018 Thivi_4536 70089421c6902bbb2577b74ab9e0aafc 1640 SUPERFAMILY SSF53756 288 695 1.57E-37 T 13-10-2018 Thivi_3234 1924d7ac1cee527d5fa60db01d80e295 311 Gene3D G3DSA:3.40.50.300 46 294 3.8E-66 T 13-10-2018 Thivi_3234 1924d7ac1cee527d5fa60db01d80e295 311 SMART SM00382 73 270 8.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3234 1924d7ac1cee527d5fa60db01d80e295 311 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3234 1924d7ac1cee527d5fa60db01d80e295 311 SUPERFAMILY SSF52540 47 276 6.81E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3234 1924d7ac1cee527d5fa60db01d80e295 311 Pfam PF00005 ABC transporter 65 212 1.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 5.9E-69 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 2.1E-148 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 SUPERFAMILY SSF55681 10 292 2.73E-131 T 13-10-2018 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 1.4E-158 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 Gene3D G3DSA:1.20.58.180 217 298 2.0E-32 T 13-10-2018 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 59.846 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2832 41287b2f3b8666cc2da4697ed58bd2e6 301 Gene3D G3DSA:3.30.930.10 3 216 1.6E-109 T 13-10-2018 Thivi_4124 938039e81779aa89c8219e2037f75170 449 SUPERFAMILY SSF111283 14 449 1.7E-123 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_4124 938039e81779aa89c8219e2037f75170 449 Gene3D G3DSA:3.30.2290.10 6 235 4.3E-88 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_4124 938039e81779aa89c8219e2037f75170 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 4.3E-56 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 352 391 2.9E-5 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 55 215 5.4E-23 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 Gene3D G3DSA:3.40.710.10 220 403 1.5E-33 T 13-10-2018 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 SUPERFAMILY SSF56601 54 404 2.35E-54 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 Gene3D G3DSA:3.40.710.10 33 128 3.1E-7 T 13-10-2018 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 67 86 1.5E-16 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 324 338 1.5E-16 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 252 274 1.5E-16 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_1920 2641af9d31a80080d35991a64d8fbb89 405 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 309 323 1.5E-16 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 35.129 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 SUPERFAMILY SSF51366 1 260 2.54E-90 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 261 2.4E-79 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 Pfam PF00290 Tryptophan synthase alpha chain 8 255 1.8E-87 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Thivi_0916 9921ccd02ae88dc20bbc6247bebad664 278 Gene3D G3DSA:3.20.20.70 1 271 2.7E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1558 72e8d5efa6532ae5fa7d3f18c72335ee 124 Gene3D G3DSA:1.10.1660.10 19 124 1.7E-22 T 13-10-2018 Thivi_1558 72e8d5efa6532ae5fa7d3f18c72335ee 124 Pfam PF13411 MerR HTH family regulatory protein 25 93 2.4E-23 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1558 72e8d5efa6532ae5fa7d3f18c72335ee 124 SMART SM00422 25 95 4.4E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1558 72e8d5efa6532ae5fa7d3f18c72335ee 124 SUPERFAMILY SSF46955 23 120 1.83E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 30 341 8.0E-108 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 Gene3D G3DSA:3.40.190.10 107 284 5.6E-107 T 13-10-2018 Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 PIRSF PIRSF002756 5 343 3.8E-108 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 Pfam PF12849 PBP superfamily domain 24 314 1.2E-58 T 13-10-2018 IPR024370 PBP domain Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 Gene3D G3DSA:3.40.190.10 30 331 5.6E-107 T 13-10-2018 Thivi_1368 71fb88bc773ab827d646a0d4ed5afd26 343 SUPERFAMILY SSF53850 30 341 3.62E-90 T 13-10-2018 Thivi_0723 44f640b70a3e3074e765c397af176ecb 184 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 24 159 6.3E-43 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 SUPERFAMILY SSF54862 4 71 9.52E-11 T 13-10-2018 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 PRINTS PR00352 3Fe-4S ferredoxin signature 49 61 1.3E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 1.3E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 1.3E-5 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 12 23 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2279 22af7deca500f6be381554eaafff2e79 87 Gene3D G3DSA:3.30.70.20 3 63 9.0E-13 T 13-10-2018 Thivi_2279 22af7deca500f6be381554eaafff2e79 87 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 62 1.9E-10 T 13-10-2018 Thivi_3839 29e9c25c7b63e64c3d3251a0457c101f 129 Gene3D G3DSA:3.40.1230.10 7 129 3.4E-37 T 13-10-2018 IPR036748 MTH938-like superfamily Thivi_3839 29e9c25c7b63e64c3d3251a0457c101f 129 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 126 2.4E-31 T 13-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein Thivi_3839 29e9c25c7b63e64c3d3251a0457c101f 129 SUPERFAMILY SSF64076 7 127 1.26E-36 T 13-10-2018 IPR036748 MTH938-like superfamily Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 80 100 4.2E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 63 80 4.2E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 SUPERFAMILY SSF46689 21 99 4.66E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 Gene3D G3DSA:1.10.10.60 7 100 6.2E-21 T 13-10-2018 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 Pfam PF02954 Bacterial regulatory protein, Fis family 57 97 1.3E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 PRINTS PR01591 DNA-binding protein FIS signature 44 59 3.5E-5 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 PRINTS PR01591 DNA-binding protein FIS signature 59 71 3.5E-5 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Thivi_1111 977a7c18806a6a0adc326443e92bf2af 101 PRINTS PR01591 DNA-binding protein FIS signature 28 44 3.5E-5 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 SUPERFAMILY SSF51306 32 151 1.73E-30 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 Gene3D G3DSA:2.10.109.10 38 153 6.1E-37 T 13-10-2018 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 TIGRFAM TIGR00498 lexA: repressor LexA 30 153 4.2E-33 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 107 119 1.8E-6 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 67 77 1.8E-6 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 78 89 1.8E-6 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Thivi_3410 7dd34a1c1137a137de6f461080181f1e 155 Pfam PF00717 Peptidase S24-like 70 137 5.2E-17 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 150 7.3E-15 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 1.8E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Gene3D G3DSA:3.90.760.10 357 430 9.8E-32 T 13-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Gene3D G3DSA:3.50.50.60 33 346 1.0E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 SUPERFAMILY SSF51905 144 284 1.81E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 359 429 5.3E-27 T 13-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 SUPERFAMILY SSF55424 358 430 3.3E-24 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 22 4.4E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 Gene3D G3DSA:3.50.50.60 146 284 1.0E-127 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4480 2f11b1934c277e19e37ee09a7e07d2f6 430 SUPERFAMILY SSF51905 32 181 2.54E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF55781 286 437 2.6E-11 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF00989 PAS fold 142 254 2.3E-13 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF00989 PAS fold 582 691 3.4E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:1.10.287.130 696 781 5.6E-24 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00387 830 941 1.3E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 831 939 4.9E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.30.450.20 580 695 7.5E-21 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00091 435 501 6.2E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00091 142 208 1.5E-12 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00091 579 645 1.1E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF47384 706 784 1.35E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF00512 His Kinase A (phospho-acceptor) domain 719 783 4.1E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00388 718 783 5.8E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00065 285 435 3.0E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.30.565.10 782 941 5.7E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.30.450.40 281 430 1.1E-7 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.30.450.20 431 579 2.3E-42 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF13426 PAS domain 445 548 5.3E-14 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF00072 Response regulator receiver domain 7 109 7.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF00072 Response regulator receiver domain 971 1083 8.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF55785 546 696 7.15E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF55785 130 255 8.54E-30 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 578 704 2.2E-15 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 260 1.5E-22 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 433 556 1.9E-22 T 13-10-2018 IPR000014 PAS domain Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:1.20.120.160 1120 1232 7.1E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF52172 968 1087 2.99E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF55874 772 939 2.1E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00448 969 1083 9.9E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00448 5 117 7.5E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00086 657 698 0.59 T 13-10-2018 IPR001610 PAC motif Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00086 215 257 6.8E-6 T 13-10-2018 IPR001610 PAC motif Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SMART SM00086 507 549 1.0E-6 T 13-10-2018 IPR001610 PAC motif Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF47226 1066 1207 2.49E-15 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF01627 Hpt domain 1143 1219 6.7E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF52172 3 161 2.42E-23 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 901 919 4.8E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 884 894 4.8E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 880 4.8E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 938 4.8E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Pfam PF13185 GAF domain 284 425 1.6E-19 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.40.50.2300 1 140 3.2E-22 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 SUPERFAMILY SSF55785 441 547 4.19E-28 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.40.50.2300 956 1087 4.6E-36 T 13-10-2018 Thivi_2150 24fa2f22b499f37f532b1de00f63317d 1317 Gene3D G3DSA:3.30.450.20 141 259 1.1E-27 T 13-10-2018 Thivi_1926 433a97b91e89114832111645bb8837a4 712 SMART SM00448 587 700 2.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1926 433a97b91e89114832111645bb8837a4 712 Pfam PF00072 Response regulator receiver domain 589 700 1.3E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1926 433a97b91e89114832111645bb8837a4 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1926 433a97b91e89114832111645bb8837a4 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1926 433a97b91e89114832111645bb8837a4 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1926 433a97b91e89114832111645bb8837a4 712 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 2.0E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1926 433a97b91e89114832111645bb8837a4 712 SUPERFAMILY SSF52172 585 703 2.13E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1926 433a97b91e89114832111645bb8837a4 712 Pfam PF00512 His Kinase A (phospho-acceptor) domain 192 256 3.9E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1926 433a97b91e89114832111645bb8837a4 712 Gene3D G3DSA:1.10.287.130 172 255 1.6E-25 T 13-10-2018 Thivi_1926 433a97b91e89114832111645bb8837a4 712 SUPERFAMILY SSF55874 247 422 2.23E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1926 433a97b91e89114832111645bb8837a4 712 Gene3D G3DSA:3.30.565.10 258 422 1.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1926 433a97b91e89114832111645bb8837a4 712 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 420 5.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1926 433a97b91e89114832111645bb8837a4 712 Gene3D G3DSA:3.40.50.2300 578 705 3.3E-32 T 13-10-2018 Thivi_1926 433a97b91e89114832111645bb8837a4 712 SMART SM00388 192 257 9.3E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1926 433a97b91e89114832111645bb8837a4 712 SMART SM00387 304 422 2.5E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1926 433a97b91e89114832111645bb8837a4 712 SUPERFAMILY SSF47384 175 258 4.12E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Pfam PF00206 Lyase 13 307 3.5E-79 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 SUPERFAMILY SSF48557 11 462 3.61E-157 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 460 44.788 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Pfam PF14698 Argininosuccinate lyase C-terminal 370 438 3.2E-26 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Gene3D G3DSA:1.10.275.10 32 236 1.4E-197 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Gene3D G3DSA:1.10.40.30 367 439 1.4E-197 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 317 336 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 3.5E-69 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 ProSitePatterns PS00163 Fumarate lyases signature. 282 291 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 TIGRFAM TIGR00838 argH: argininosuccinate lyase 11 462 1.4E-197 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 Gene3D G3DSA:1.20.200.10 126 455 1.4E-197 T 13-10-2018 Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 7.0E-30 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 7.0E-30 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 7.0E-30 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_2221 f474cde7e8ac943c90b3ef9701c18638 505 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 7.0E-30 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 SUPERFAMILY SSF53807 25 278 2.49E-67 T 13-10-2018 Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 53 60 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 Gene3D G3DSA:3.40.50.1980 181 279 2.1E-20 T 13-10-2018 Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 35 275 2.8E-56 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 Gene3D G3DSA:3.40.50.1980 35 180 1.8E-36 T 13-10-2018 Thivi_1645 7f8f0c710e0d0da32664d873e1999647 320 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 117 131 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_4251 822c32df00399a66c906d00e955beb55 509 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 335 504 2.0E-32 T 13-10-2018 IPR014263 Methanolan biosynthesis EpsI Thivi_4251 822c32df00399a66c906d00e955beb55 509 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 182 274 1.8E-20 T 13-10-2018 IPR026392 Exosortase/Archaeosortase domain Thivi_4251 822c32df00399a66c906d00e955beb55 509 Pfam PF11984 Protein of unknown function (DUF3485) 308 502 1.1E-41 T 13-10-2018 IPR014263 Methanolan biosynthesis EpsI Thivi_4251 822c32df00399a66c906d00e955beb55 509 TIGRFAM TIGR02602 8TM_EpsH: exosortase 39 275 2.7E-77 T 13-10-2018 IPR013426 Exosortase, EpsH-like Thivi_4251 822c32df00399a66c906d00e955beb55 509 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 24 275 1.6E-62 T 13-10-2018 IPR019127 Exosortase Thivi_4251 822c32df00399a66c906d00e955beb55 509 TIGRFAM TIGR03109 exosortase_1: exosortase A 17 277 1.1E-96 T 13-10-2018 IPR017540 Exosortase 1 Thivi_4116 be5a68dd06dcca513bf2e718eb1027e3 199 SUPERFAMILY SSF50341 25 164 8.89E-34 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_4116 be5a68dd06dcca513bf2e718eb1027e3 199 Gene3D G3DSA:2.40.50.180 44 157 7.5E-36 T 13-10-2018 Thivi_4116 be5a68dd06dcca513bf2e718eb1027e3 199 Gene3D G3DSA:2.30.30.40 27 156 7.5E-36 T 13-10-2018 Thivi_4116 be5a68dd06dcca513bf2e718eb1027e3 199 SMART SM00260 21 162 2.4E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_4116 be5a68dd06dcca513bf2e718eb1027e3 199 Pfam PF01584 CheW-like domain 25 163 1.5E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1817 85c3cad28010282144fb1278e3c16f69 659 Gene3D G3DSA:3.90.10.10 71 204 4.4E-5 T 13-10-2018 Thivi_1817 85c3cad28010282144fb1278e3c16f69 659 SUPERFAMILY SSF48695 41 516 2.3E-36 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1817 85c3cad28010282144fb1278e3c16f69 659 Gene3D G3DSA:1.20.950.20 389 619 1.1E-34 T 13-10-2018 Thivi_2303 5995c95a6c118ab388fc5633ca443c26 267 Gene3D G3DSA:3.40.1730.10 6 237 6.1E-79 T 13-10-2018 IPR038225 T6S-associated protein TagF superfamily Thivi_2303 5995c95a6c118ab388fc5633ca443c26 267 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 143 7.1E-44 T 13-10-2018 IPR017748 T6S-associated protein TagF Thivi_2303 5995c95a6c118ab388fc5633ca443c26 267 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 143 1.5E-46 T 13-10-2018 IPR017748 T6S-associated protein TagF Thivi_2303 5995c95a6c118ab388fc5633ca443c26 267 PIRSF PIRSF029287 2 233 1.3E-61 T 13-10-2018 IPR017748 T6S-associated protein TagF Thivi_0356 3023fad34469270fbff075973d9c78ec 453 SUPERFAMILY SSF52540 116 354 6.79E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0356 3023fad34469270fbff075973d9c78ec 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 423 443 1.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 406 423 1.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 Pfam PF02954 Bacterial regulatory protein, Fis family 401 440 1.5E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 Pfam PF00158 Sigma-54 interaction domain 117 284 2.1E-70 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 Gene3D G3DSA:1.10.10.60 387 445 5.6E-12 T 13-10-2018 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 SMART SM00382 137 281 3.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0356 3023fad34469270fbff075973d9c78ec 453 SUPERFAMILY SSF46689 357 443 1.3E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 Gene3D G3DSA:1.10.8.60 289 363 1.1E-17 T 13-10-2018 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_0356 3023fad34469270fbff075973d9c78ec 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 141 154 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_0356 3023fad34469270fbff075973d9c78ec 453 Gene3D G3DSA:3.40.50.300 104 288 1.3E-63 T 13-10-2018 Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 Pfam PF01895 PhoU domain 33 120 2.8E-16 T 13-10-2018 IPR026022 PhoU domain Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 Pfam PF01895 PhoU domain 143 226 1.6E-8 T 13-10-2018 IPR026022 PhoU domain Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 Gene3D G3DSA:1.20.58.220 11 129 4.3E-30 T 13-10-2018 IPR038078 PhoU-like domain superfamily Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 Gene3D G3DSA:1.20.58.220 132 248 3.8E-15 T 13-10-2018 IPR038078 PhoU-like domain superfamily Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 SUPERFAMILY SSF109755 20 238 1.88E-46 T 13-10-2018 Thivi_3049 cf90caf7f10e5d5c6f79388c6f545bf9 252 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 20 234 4.5E-42 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 Gene3D G3DSA:3.30.70.20 81 169 3.1E-20 T 13-10-2018 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 Pfam PF14697 4Fe-4S dicluster domain 103 157 3.5E-16 T 13-10-2018 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 175 2.3E-74 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 Gene3D G3DSA:1.10.15.40 34 80 1.3E-9 T 13-10-2018 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 Pfam PF04060 Putative Fe-S cluster 41 73 1.6E-16 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 1 162 24.019 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 PIRSF PIRSF005784 1 183 1.1E-77 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 SUPERFAMILY SSF54862 36 169 1.4E-27 T 13-10-2018 Thivi_1931 a8807aca6e28bb584e0b823de54ac907 190 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 110 121 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4146 377c142abc93ceda298243808bc4463f 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 366 4.4E-28 T 13-10-2018 IPR000160 GGDEF domain Thivi_4146 377c142abc93ceda298243808bc4463f 641 Gene3D G3DSA:3.20.20.450 382 633 2.6E-88 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4146 377c142abc93ceda298243808bc4463f 641 SMART SM00052 380 626 5.6E-90 T 13-10-2018 IPR001633 EAL domain Thivi_4146 377c142abc93ceda298243808bc4463f 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 369 7.1E-23 T 13-10-2018 IPR000160 GGDEF domain Thivi_4146 377c142abc93ceda298243808bc4463f 641 SMART SM00267 188 370 5.3E-20 T 13-10-2018 IPR000160 GGDEF domain Thivi_4146 377c142abc93ceda298243808bc4463f 641 SUPERFAMILY SSF141868 385 630 3.66E-78 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4146 377c142abc93ceda298243808bc4463f 641 SUPERFAMILY SSF55073 201 371 2.67E-27 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4146 377c142abc93ceda298243808bc4463f 641 Pfam PF00563 EAL domain 388 621 2.6E-65 T 13-10-2018 IPR001633 EAL domain Thivi_4146 377c142abc93ceda298243808bc4463f 641 Gene3D G3DSA:3.30.70.270 197 377 2.5E-36 T 13-10-2018 Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 Pfam PF01050 Mannose-6-phosphate isomerase 336 486 1.0E-72 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 Gene3D G3DSA:3.90.550.10 3 367 1.3E-110 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 490 4.0E-203 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 SUPERFAMILY SSF53448 1 303 4.33E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 SUPERFAMILY SSF51182 198 490 5.24E-80 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 Pfam PF00483 Nucleotidyl transferase 5 307 1.2E-57 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_2629 7d0f5a457acd6972ede65c979039ba7b 496 Gene3D G3DSA:2.60.120.10 368 479 2.5E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 Gene3D G3DSA:3.10.420.10 3 153 1.2E-56 T 13-10-2018 IPR035958 SecB-like superfamily Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 SUPERFAMILY SSF54611 4 144 6.1E-50 T 13-10-2018 IPR035958 SecB-like superfamily Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 10 144 9.3E-52 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.746 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 Pfam PF02556 Preprotein translocase subunit SecB 7 145 2.7E-55 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 9.5E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 9.5E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 9.5E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2789 b9a91acb593ad6075167da9f64eea16d 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 9.5E-35 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Thivi_2899 7ea14430a507bf6e174442190cb58b08 66 SUPERFAMILY SSF54285 1 66 7.2E-17 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_2899 7ea14430a507bf6e174442190cb58b08 66 Pfam PF02597 ThiS family 3 66 3.0E-14 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Thivi_2899 7ea14430a507bf6e174442190cb58b08 66 Gene3D G3DSA:3.10.20.30 1 66 1.4E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2899 7ea14430a507bf6e174442190cb58b08 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 7.1E-21 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 SUPERFAMILY SSF53474 5 253 1.77E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 SUPERFAMILY SSF82784 230 409 2.75E-37 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 Gene3D G3DSA:3.30.300.20 275 413 5.5E-36 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 Pfam PF02566 OsmC-like protein 305 407 4.4E-19 T 13-10-2018 IPR003718 OsmC/Ohr family Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 Gene3D G3DSA:3.40.50.1820 4 258 3.4E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1744 c9f43d10ca1f649865b162c8cb2095c5 419 Pfam PF12146 Serine aminopeptidase, S33 49 134 1.2E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Thivi_2831 7df3afad37503453058168da5ad9b209 692 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 691 24.422 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 691 2.6E-225 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 5.1E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 247 262 5.1E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 5.1E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 5.1E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 5.1E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 SMART SM00836 586 691 6.4E-6 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Thivi_2831 7df3afad37503453058168da5ad9b209 692 SUPERFAMILY SSF109604 342 507 4.6E-15 T 13-10-2018 Thivi_2831 7df3afad37503453058168da5ad9b209 692 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 551 4.2E-200 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Thivi_2831 7df3afad37503453058168da5ad9b209 692 Pfam PF05746 DALR anticodon binding domain 583 678 1.4E-9 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Thivi_3362 1c09838e6952ea505126ac2130a82e3c 275 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 245 38.351 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Thivi_3362 1c09838e6952ea505126ac2130a82e3c 275 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 246 1.5E-86 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD Thivi_3362 1c09838e6952ea505126ac2130a82e3c 275 Pfam PF13525 Outer membrane lipoprotein 35 237 2.9E-66 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Thivi_3362 1c09838e6952ea505126ac2130a82e3c 275 SUPERFAMILY SSF48452 35 118 9.6E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3362 1c09838e6952ea505126ac2130a82e3c 275 Gene3D G3DSA:1.25.40.10 34 252 6.6E-58 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0975 fe19c95262a0c021f23861cedeb05598 306 SUPERFAMILY SSF52540 83 271 3.99E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0975 fe19c95262a0c021f23861cedeb05598 306 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 51 277 5.8E-111 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Thivi_0975 fe19c95262a0c021f23861cedeb05598 306 PIRSF PIRSF028756 14 306 2.3E-131 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Thivi_0975 fe19c95262a0c021f23861cedeb05598 306 Gene3D G3DSA:3.40.50.300 15 290 1.9E-96 T 13-10-2018 Thivi_0975 fe19c95262a0c021f23861cedeb05598 306 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 52 277 2.0E-112 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 445 1.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SUPERFAMILY SSF55785 55 168 5.39E-13 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Gene3D G3DSA:1.10.287.130 208 287 5.0E-19 T 13-10-2018 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SUPERFAMILY SSF47384 210 288 5.89E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Gene3D G3DSA:1.10.287.130 648 709 5.0E-5 T 13-10-2018 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Gene3D G3DSA:3.30.565.10 288 448 3.9E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 57 170 8.6E-7 T 13-10-2018 IPR000014 PAS domain Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SMART SM00448 473 586 1.7E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Gene3D G3DSA:3.30.450.20 53 168 1.1E-13 T 13-10-2018 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SUPERFAMILY SSF55874 276 444 4.06E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 398 1.4E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Gene3D G3DSA:3.40.50.2300 470 594 1.6E-30 T 13-10-2018 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Pfam PF00072 Response regulator receiver domain 475 583 6.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SMART SM00387 333 446 1.5E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Pfam PF13426 PAS domain 74 167 4.8E-6 T 13-10-2018 IPR000014 PAS domain Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 286 7.0E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SUPERFAMILY SSF52172 471 594 2.7E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SMART SM00388 221 287 1.9E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SMART SM00388 642 712 1.5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0289 3b6eb1bbfd4d8972670c87d62b9a66de 729 SMART SM00091 60 126 1.9E-4 T 13-10-2018 IPR000014 PAS domain Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Pfam PF14450 Cell division protein FtsA 11 187 1.5E-13 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 378 1.6E-154 T 13-10-2018 IPR020823 Cell division protein FtsA Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 SUPERFAMILY SSF53067 9 197 8.24E-63 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Gene3D G3DSA:3.30.1490.110 87 169 1.6E-126 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 7.2E-33 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 SMART SM00842 10 196 1.0E-104 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 PIRSF PIRSF003101 1 411 3.5E-159 T 13-10-2018 IPR020823 Cell division protein FtsA Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 SUPERFAMILY SSF53067 199 378 6.48E-50 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Gene3D G3DSA:3.30.420.40 197 352 1.6E-126 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Gene3D G3DSA:3.90.640.10 235 300 1.6E-126 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Pfam PF14450 Cell division protein FtsA 207 374 7.2E-25 T 13-10-2018 Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 31.751 T 13-10-2018 IPR020823 Cell division protein FtsA Thivi_2314 6d5fee8f25b4fa3d4797e1be242f2e97 411 Gene3D G3DSA:3.30.420.40 13 371 1.6E-126 T 13-10-2018 Thivi_2062 845f75cf95afc3ffefdfc2aa58f4daa3 560 SUPERFAMILY SSF48452 35 136 3.8E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2062 845f75cf95afc3ffefdfc2aa58f4daa3 560 Gene3D G3DSA:1.25.40.10 55 173 1.8E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2062 845f75cf95afc3ffefdfc2aa58f4daa3 560 SMART SM00028 86 119 8.6E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2062 845f75cf95afc3ffefdfc2aa58f4daa3 560 Pfam PF07719 Tetratricopeptide repeat 88 119 1.2E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 9.4E-33 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 SUPERFAMILY SSF54719 82 191 3.01E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 Gene3D G3DSA:1.10.287.990 20 82 7.7E-26 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 Gene3D G3DSA:2.40.500.20 86 193 6.0E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 SUPERFAMILY SSF46609 1 83 5.24E-36 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PIRSF PIRSF000349 1 193 1.2E-82 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.8E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.8E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 4.8E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.8E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.8E-23 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_1868 284824f7c49c6a5b8e6f8d2beaa09f0d 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.1E-39 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Thivi_3342 73a084833306c043ce00e814db4ebdde 438 Gene3D G3DSA:2.30.40.10 12 427 8.6E-170 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_3342 73a084833306c043ce00e814db4ebdde 438 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 4 435 40.82 T 13-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Thivi_3342 73a084833306c043ce00e814db4ebdde 438 SUPERFAMILY SSF51338 4 434 2.47E-26 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_3342 73a084833306c043ce00e814db4ebdde 438 Pfam PF01979 Amidohydrolase family 60 409 5.3E-70 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Thivi_3342 73a084833306c043ce00e814db4ebdde 438 SUPERFAMILY SSF51556 62 361 2.72E-101 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_3342 73a084833306c043ce00e814db4ebdde 438 Gene3D G3DSA:3.20.20.140 63 353 8.6E-170 T 13-10-2018 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 Pfam PF14489 QueF-like protein 40 117 1.8E-31 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 116 5.7E-52 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 SUPERFAMILY SSF55620 5 111 2.59E-26 T 13-10-2018 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 PIRSF PIRSF027377 1 123 2.0E-52 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 Gene3D G3DSA:3.30.1130.10 2 122 3.1E-43 T 13-10-2018 Thivi_1804 ef56709a1db8f39caee4860183569ee5 129 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 129 49.295 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 Pfam PF01061 ABC-2 type transporter 31 238 3.5E-29 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 PIRSF PIRSF006648 17 272 8.5E-17 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 47 68 8.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 159 183 8.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 8.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2677 9da778c1b489dce8b7bb1a610c8265df 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 216 235 8.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_1322 f554df2b55e5243965095f82f803f083 294 Pfam PF12697 Alpha/beta hydrolase family 38 275 7.8E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1322 f554df2b55e5243965095f82f803f083 294 SUPERFAMILY SSF53474 24 288 7.02E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1322 f554df2b55e5243965095f82f803f083 294 Gene3D G3DSA:3.40.50.1820 7 290 5.8E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 328 1.9E-106 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 6 328 37.898 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 SMART SM00729 15 225 4.1E-7 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 Pfam PF13353 4Fe-4S single cluster domain 22 87 4.7E-6 T 13-10-2018 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 Pfam PF04055 Radical SAM superfamily 20 179 8.0E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 SUPERFAMILY SSF102114 6 291 3.27E-73 T 13-10-2018 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 Gene3D G3DSA:3.20.20.70 3 328 4.9E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1329 8a5fdd3f0d69bac9abea028837b5790d 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.7E-34 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_4036 d5fafc5ea0bee06d5040ed60e6cf93b9 93 Pfam PF01909 Nucleotidyltransferase domain 13 75 3.5E-5 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Thivi_4036 d5fafc5ea0bee06d5040ed60e6cf93b9 93 SUPERFAMILY SSF81301 8 83 6.31E-11 T 13-10-2018 Thivi_4036 d5fafc5ea0bee06d5040ed60e6cf93b9 93 Gene3D G3DSA:3.30.460.10 1 93 1.5E-13 T 13-10-2018 Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 100 178 2.7E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 1.1E-34 T 13-10-2018 Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 Gene3D G3DSA:1.10.150.240 18 84 2.1E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 80 184 2.9E-12 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 SUPERFAMILY SSF56784 3 213 4.07E-59 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2189 7a8948cde5d94aa581033b3cb48896a2 219 Gene3D G3DSA:3.40.50.1000 6 205 2.1E-53 T 13-10-2018 IPR023214 HAD superfamily Thivi_0202 133621b8860024493c88ff55d536c412 258 Pfam PF09955 Predicted integral membrane protein (DUF2189) 72 193 1.3E-26 T 13-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 SUPERFAMILY SSF47413 38 87 5.09E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 Pfam PF01381 Helix-turn-helix 38 82 1.8E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 Pfam PF00717 Peptidase S24-like 158 223 1.3E-11 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 Gene3D G3DSA:1.10.260.40 22 91 1.7E-6 T 13-10-2018 Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 SUPERFAMILY SSF51306 109 238 3.27E-24 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_3503 00b4fbea84f141248021c6656a0c5c54 243 Gene3D G3DSA:2.10.109.10 119 240 2.4E-11 T 13-10-2018 Thivi_1286 9dba9d2d80e6136a5f1c01a5fac14ca4 436 SUPERFAMILY SSF48695 37 231 3.75E-21 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1286 9dba9d2d80e6136a5f1c01a5fac14ca4 436 SUPERFAMILY SSF48695 35 323 6.14E-6 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1286 9dba9d2d80e6136a5f1c01a5fac14ca4 436 Pfam PF13435 Cytochrome c554 and c-prime 42 130 3.2E-20 T 13-10-2018 IPR023155 Cytochrome c-552/4 Thivi_1286 9dba9d2d80e6136a5f1c01a5fac14ca4 436 Gene3D G3DSA:1.10.1130.10 35 158 3.9E-10 T 13-10-2018 Thivi_2356 cd499f6b2a1e2bd3908c547848464fe2 154 Gene3D G3DSA:3.10.590.10 1 154 3.7E-61 T 13-10-2018 Thivi_2356 cd499f6b2a1e2bd3908c547848464fe2 154 SUPERFAMILY SSF88697 1 153 1.99E-58 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_2356 cd499f6b2a1e2bd3908c547848464fe2 154 Pfam PF01878 EVE domain 4 152 9.9E-55 T 13-10-2018 IPR002740 EVE domain Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PIRSF PIRSF036893 1 179 1.3E-37 T 13-10-2018 IPR022271 Lipocalin, ApoD type Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PRINTS PR01171 Bacterial lipocalin signature 105 119 4.4E-7 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PRINTS PR01171 Bacterial lipocalin signature 137 148 4.4E-7 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PRINTS PR01171 Bacterial lipocalin signature 34 48 4.4E-7 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PRINTS PR01171 Bacterial lipocalin signature 164 174 4.4E-7 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 PRINTS PR01171 Bacterial lipocalin signature 51 67 4.4E-7 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 Gene3D G3DSA:2.40.128.20 22 179 1.9E-35 T 13-10-2018 IPR012674 Calycin Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 Pfam PF08212 Lipocalin-like domain 34 174 1.8E-36 T 13-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Thivi_0251 dbf7ea289e1d7e7acce2e9b061650993 180 SUPERFAMILY SSF50814 12 175 3.43E-33 T 13-10-2018 IPR012674 Calycin Thivi_1617 3c0c483a5da4e8e6b1c1ae49b729962c 870 Pfam PF12228 Protein of unknown function (DUF3604) 322 761 6.5E-109 T 13-10-2018 IPR022028 Protein of unknown function DUF3604 Thivi_1617 3c0c483a5da4e8e6b1c1ae49b729962c 870 Pfam PF12228 Protein of unknown function (DUF3604) 50 279 6.5E-21 T 13-10-2018 IPR022028 Protein of unknown function DUF3604 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Gene3D G3DSA:1.10.1060.10 359 436 7.1E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Pfam PF13187 4Fe-4S dicluster domain 369 421 2.9E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Pfam PF10531 SLBB domain 289 337 1.9E-13 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 132 276 3.3E-49 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 SUPERFAMILY SSF142019 86 296 6.8E-57 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 3 437 1.6E-176 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Gene3D G3DSA:3.40.50.11540 136 285 1.2E-16 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 106 5.4E-31 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 SUPERFAMILY SSF46548 330 440 2.49E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3396 78cf144faeb769aa3b6728c67b44aaeb 506 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 506 161.216 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_4134 d20f53d5f624d256760fd6ef977d007c 834 SUPERFAMILY SSF52540 47 388 1.46E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4134 d20f53d5f624d256760fd6ef977d007c 834 Pfam PF04851 Type III restriction enzyme, res subunit 7 206 2.4E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_4134 d20f53d5f624d256760fd6ef977d007c 834 SMART SM00487 2 241 0.0027 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_4134 d20f53d5f624d256760fd6ef977d007c 834 Gene3D G3DSA:3.40.50.300 2 228 1.3E-14 T 13-10-2018 Thivi_4134 d20f53d5f624d256760fd6ef977d007c 834 SUPERFAMILY SSF52540 5 222 5.02E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4056 dd36530d8f0ce951d97a386d0f1f0750 316 Pfam PF13469 Sulfotransferase family 42 161 4.8E-15 T 13-10-2018 Thivi_4056 dd36530d8f0ce951d97a386d0f1f0750 316 Pfam PF13469 Sulfotransferase family 187 263 1.6E-7 T 13-10-2018 Thivi_4056 dd36530d8f0ce951d97a386d0f1f0750 316 SUPERFAMILY SSF52540 37 313 4.18E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3550 40cc2f5dd75e1d2df7c9a5833e51c7c8 160 Gene3D G3DSA:2.60.120.10 4 143 8.6E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_3550 40cc2f5dd75e1d2df7c9a5833e51c7c8 160 Pfam PF00027 Cyclic nucleotide-binding domain 35 120 3.0E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3550 40cc2f5dd75e1d2df7c9a5833e51c7c8 160 SMART SM00100 15 132 3.3E-6 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3550 40cc2f5dd75e1d2df7c9a5833e51c7c8 160 SUPERFAMILY SSF51206 8 136 9.56E-23 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 Gene3D G3DSA:3.60.150.10 1 363 4.6E-152 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 Pfam PF01264 Chorismate synthase 10 345 7.8E-136 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 2.2E-134 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.317 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 PIRSF PIRSF001456 3 361 1.1E-136 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_1751 ee13ef6915d184e6d93667a0482f400f 367 SUPERFAMILY SSF103263 4 352 7.33E-143 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 SMART SM00240 182 236 1.5E-9 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 Pfam PF00498 FHA domain 185 251 4.5E-13 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 Pfam PF13676 TIR domain 4 111 6.8E-19 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 Gene3D G3DSA:2.60.200.20 136 263 4.6E-20 T 13-10-2018 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 SUPERFAMILY SSF52200 3 118 7.46E-21 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 SUPERFAMILY SSF49879 161 260 1.76E-20 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_3428 49dfe71a98aa438fa3efc34d795ba580 264 Gene3D G3DSA:3.40.50.10140 2 129 2.1E-21 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_1703 1c05c90200d1adfb164f2dbfc917150a 194 PIRSF PIRSF006135 18 188 7.0E-50 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Thivi_1703 1c05c90200d1adfb164f2dbfc917150a 194 SUPERFAMILY SSF52540 20 185 4.79E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1703 1c05c90200d1adfb164f2dbfc917150a 194 Gene3D G3DSA:3.40.50.300 19 187 3.2E-42 T 13-10-2018 Thivi_1703 1c05c90200d1adfb164f2dbfc917150a 194 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 20 186 1.3E-51 T 13-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 2.4E-27 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 SMART SM00460 172 248 9.5E-21 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1126 0.0 T 13-10-2018 IPR018667 Domain of unknown function DUF2126 Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 SUPERFAMILY SSF54001 8 337 9.11E-67 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 Gene3D G3DSA:3.10.620.30 105 280 4.0E-25 T 13-10-2018 Thivi_3897 4e2897fd7fd79e19dd27e7e07410d7fd 1131 Pfam PF01841 Transglutaminase-like superfamily 131 246 9.6E-19 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 Gene3D G3DSA:1.10.287.950 399 697 6.8E-86 T 13-10-2018 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 179 1.1E-20 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SUPERFAMILY SSF58104 415 696 2.75E-73 T 13-10-2018 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 507 663 1.3E-51 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 Gene3D G3DSA:1.20.120.1530 202 336 6.8E-7 T 13-10-2018 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 3.4E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 3.4E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 3.4E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 3.4E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 208 3.4E-58 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SMART SM00304 304 356 29.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SMART SM00304 210 265 6.7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SMART SM00304 395 447 2.7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SUPERFAMILY SSF58104 324 461 4.71E-5 T 13-10-2018 Thivi_1222 d5a4493b9edda54602c9b4bc13bbe7ac 744 SMART SM00283 448 695 1.2E-90 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1989 4d11c7bb4630d3e68ca2bee04d5f9efd 273 Pfam PF02698 DUF218 domain 78 243 1.4E-19 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 296 8.3E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 SUPERFAMILY SSF56042 141 298 3.29E-35 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 315 26.894 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 315 1.0E-93 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 PIRSF PIRSF005303 1 315 3.4E-77 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 Gene3D G3DSA:3.30.1330.10 1 142 1.1E-42 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 SUPERFAMILY SSF55326 3 136 2.44E-30 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 Gene3D G3DSA:3.90.650.10 144 316 6.6E-50 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1037 bea8c25abc8c6cea2285379c215201eb 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.2E-19 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:3.30.70.3070 165 289 2.6E-49 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 PRINTS PR00207 Flagellin signature 37 54 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 PRINTS PR00207 Flagellin signature 76 95 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 PRINTS PR00207 Flagellin signature 111 134 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Pfam PF00700 Bacterial flagellin C-terminal helical region 632 715 9.7E-23 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.7E-45 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:1.20.1330.10 530 667 1.5E-15 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 SUPERFAMILY SSF64518 403 716 1.83E-31 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:3.30.70.2120 401 510 4.8E-7 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:1.20.58.1830 2 62 1.7E-7 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:1.10.8.410 668 716 1.1E-20 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 Gene3D G3DSA:1.20.1330.10 63 301 2.6E-49 T 13-10-2018 Thivi_0776 a273c334fecc1d488b513f17ad905081 716 SUPERFAMILY SSF64518 1 420 2.75E-65 T 13-10-2018 Thivi_0153 15ca91c1eeaff404ffe09d24a6184b2a 319 Gene3D G3DSA:1.10.8.300 212 317 2.0E-22 T 13-10-2018 Thivi_0153 15ca91c1eeaff404ffe09d24a6184b2a 319 SUPERFAMILY SSF52540 28 295 8.04E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0153 15ca91c1eeaff404ffe09d24a6184b2a 319 Gene3D G3DSA:3.40.50.300 32 198 3.4E-42 T 13-10-2018 Thivi_0153 15ca91c1eeaff404ffe09d24a6184b2a 319 PIRSF PIRSF002849 5 319 1.9E-114 T 13-10-2018 Thivi_0153 15ca91c1eeaff404ffe09d24a6184b2a 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 51 181 2.5E-61 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Thivi_3014 c9476fcefd7952ad9860c70ee0c97496 371 Pfam PF00672 HAMP domain 282 332 2.4E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3014 c9476fcefd7952ad9860c70ee0c97496 371 SMART SM01358 26 256 4.7E-17 T 13-10-2018 IPR032255 Helical bimodular sensor domain Thivi_3014 c9476fcefd7952ad9860c70ee0c97496 371 SMART SM00304 282 335 5.9E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 SUPERFAMILY SSF116726 361 453 9.68E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Gene3D G3DSA:3.40.50.720 2 138 2.2E-41 T 13-10-2018 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 SUPERFAMILY SSF116726 148 224 3.01E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Gene3D G3DSA:3.40.50.720 232 365 1.0E-34 T 13-10-2018 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Gene3D G3DSA:3.30.70.1450 366 469 3.4E-26 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Gene3D G3DSA:3.30.70.1450 139 230 2.2E-23 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 SUPERFAMILY SSF51735 2 151 4.44E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.6E-22 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.6E-22 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.6E-22 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.6E-22 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.6E-22 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Pfam PF02080 TrkA-C domain 390 462 3.8E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Pfam PF02080 TrkA-C domain 156 224 8.4E-14 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Pfam PF02254 TrkA-N domain 234 349 8.9E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 Pfam PF02254 TrkA-N domain 3 106 2.9E-25 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_2540 8427dcbde829f4e62513a3e43189c644 469 SUPERFAMILY SSF51735 231 375 4.13E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 SUPERFAMILY SSF51569 8 336 2.93E-143 T 13-10-2018 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 14 334 7.9E-139 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 254 266 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 Gene3D G3DSA:3.20.20.70 3 337 2.7E-145 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PIRSF PIRSF001415 5 337 3.3E-148 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 SMART SM01004 11 335 5.7E-244 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 131 145 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 279 294 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 254 270 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 309 328 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 200 219 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_3089 9af056a682dcdf7288c65dae9b7043d2 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 162 181 5.6E-57 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 175 1.4E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 179 3.0E-30 T 13-10-2018 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 Gene3D G3DSA:1.10.150.240 13 78 5.4E-51 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 179 9.9E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 1 204 1.2E-52 T 13-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 SUPERFAMILY SSF56784 1 211 2.49E-55 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1028 0ffa7ab8b0f51b41ec4b38126e2869f8 214 Gene3D G3DSA:3.40.50.1000 1 197 5.4E-51 T 13-10-2018 IPR023214 HAD superfamily Thivi_3216 8963acd49b8ec2b61dbbd7ebde0d77e4 258 Gene3D G3DSA:2.40.70.10 126 256 4.1E-20 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_3216 8963acd49b8ec2b61dbbd7ebde0d77e4 258 Pfam PF13975 gag-polyprotein putative aspartyl protease 157 241 2.9E-14 T 13-10-2018 Thivi_3216 8963acd49b8ec2b61dbbd7ebde0d77e4 258 SUPERFAMILY SSF50630 159 247 2.94E-10 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 1.3E-125 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 Gene3D G3DSA:1.10.275.10 1 117 4.8E-49 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 Gene3D G3DSA:1.10.40.30 382 445 6.5E-150 T 13-10-2018 Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.3E-17 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.3E-17 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.3E-17 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.3E-17 T 13-10-2018 IPR000362 Fumarate lyase family Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 SUPERFAMILY SSF48557 10 451 8.33E-106 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 Pfam PF00206 Lyase 14 312 2.7E-64 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 Gene3D G3DSA:1.20.200.10 118 446 6.5E-150 T 13-10-2018 Thivi_1893 378f3b96f82f6a1d9e3cd02b69232e33 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.8E-48 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55785 882 1010 3.54E-27 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF00072 Response regulator receiver domain 1290 1400 9.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00387 1143 1266 4.0E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55785 757 883 1.58E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF00989 PAS fold 302 356 7.2E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.450.40 619 763 8.6E-12 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.450.20 455 578 3.9E-26 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 894 1016 5.4E-25 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 765 890 2.7E-15 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 461 588 1.2E-11 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 416 1.4E-12 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.450.20 764 883 2.2E-18 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55785 294 410 9.18E-16 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55781 629 766 5.64E-15 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00065 590 765 2.7E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.40.50.2300 1286 1409 3.5E-26 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF52172 1288 1404 4.41E-27 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55874 1094 1264 1.02E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00448 1288 1399 1.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1146 1264 3.5E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF08448 PAS fold 903 1011 1.2E-11 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF08448 PAS fold 784 886 1.2E-8 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.450.20 884 1010 2.4E-26 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.450.20 292 410 1.4E-18 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1226 1244 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1250 1263 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1195 1209 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1213 1223 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF08447 PAS fold 487 576 7.7E-18 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:1.10.287.130 1027 1100 3.6E-10 T 13-10-2018 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SUPERFAMILY SSF55785 469 583 3.84E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Pfam PF01590 GAF domain 629 751 8.2E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 Gene3D G3DSA:3.30.565.10 1104 1269 1.4E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00091 301 367 4.5E-8 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00091 897 963 1.5E-11 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00091 769 836 1.4E-5 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00091 463 532 0.012 T 13-10-2018 IPR000014 PAS domain Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00086 970 1012 4.9E-5 T 13-10-2018 IPR001610 PAC motif Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00086 539 582 1.6E-8 T 13-10-2018 IPR001610 PAC motif Thivi_0562 9eea2ec2331dc2fb190324fb4da939dd 1415 SMART SM00086 843 885 2.2E-7 T 13-10-2018 IPR001610 PAC motif Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 16 338 2.0E-132 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 SUPERFAMILY SSF100950 11 341 4.35E-110 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 Gene3D G3DSA:3.40.50.10470 190 347 3.1E-51 T 13-10-2018 Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 350 39.023 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 338 1.1E-106 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 Gene3D G3DSA:1.20.120.1840 13 189 4.7E-50 T 13-10-2018 Thivi_3343 52ccfb43cad5b1d1c9ae7fd5c1d8cd3f 357 Pfam PF01008 Initiation factor 2 subunit family 54 338 6.8E-75 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Thivi_4491 f91dd9853febf0a39f88e78e6ece6fc8 269 SMART SM01057 45 267 1.9E-62 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Thivi_4491 f91dd9853febf0a39f88e78e6ece6fc8 269 Gene3D G3DSA:3.10.200.10 42 269 1.2E-62 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_4491 f91dd9853febf0a39f88e78e6ece6fc8 269 Pfam PF00194 Eukaryotic-type carbonic anhydrase 44 265 6.8E-34 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Thivi_4491 f91dd9853febf0a39f88e78e6ece6fc8 269 SUPERFAMILY SSF51069 44 264 5.89E-61 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 Gene3D G3DSA:1.20.85.10 2 169 1.1E-70 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 Gene3D G3DSA:1.20.85.10 172 278 1.8E-48 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 Pfam PF00124 Photosynthetic reaction centre protein 30 278 4.9E-100 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 TIGRFAM TIGR01157 pufL: photosynthetic reaction center L subunit 35 278 4.0E-128 T 13-10-2018 IPR005871 Photosynthetic reaction centre, L subunit GO:0019684|GO:0030077|GO:0045156 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 SUPERFAMILY SSF81483 3 278 1.96E-110 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 172 198 - T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 89 117 3.4E-63 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 34 55 3.4E-63 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 231 256 3.4E-63 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 178 204 3.4E-63 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_2000 e5fa70cd598b5c068ecfdd7a2351fc54 278 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 122 144 3.4E-63 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 19 248 3.8E-89 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 248 37.881 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 34 49 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 248 1.6E-77 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 Gene3D G3DSA:3.40.50.150 29 249 4.6E-69 T 13-10-2018 Thivi_1732 051687971e643986761ac3d3c43a35dc 249 SUPERFAMILY SSF53335 14 246 1.34E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 Gene3D G3DSA:1.20.1560.10 16 339 4.1E-80 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 Pfam PF00005 ABC transporter 370 519 3.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 Gene3D G3DSA:3.40.50.300 347 596 6.7E-95 T 13-10-2018 Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 Pfam PF00664 ABC transporter transmembrane region 36 304 9.1E-54 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 SMART SM00382 379 565 1.9E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 16 590 1.9E-241 T 13-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 SUPERFAMILY SSF52540 345 590 1.25E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0527 7a17a237fd7125a4f98521953b28df3b 606 SUPERFAMILY SSF90123 22 333 3.66E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 SUPERFAMILY SSF69765 2 156 2.09E-62 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 34.934 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 Pfam PF02542 YgbB family 1 154 2.3E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 155 5.1E-64 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 Gene3D G3DSA:3.30.1330.50 1 159 3.2E-66 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_0503 5f533d3167d14ae055d7f29160366076 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Thivi_3504 1a979aedba0b91c1edebec6c98a7896c 114 Pfam PF13693 Winged helix-turn-helix DNA-binding 17 83 9.2E-22 T 13-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain Thivi_3504 1a979aedba0b91c1edebec6c98a7896c 114 Gene3D G3DSA:1.10.260.40 10 76 7.6E-18 T 13-10-2018 Thivi_3504 1a979aedba0b91c1edebec6c98a7896c 114 SUPERFAMILY SSF47413 10 75 4.88E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_2786 b47d77c99876de8b914988b66d174958 445 SUPERFAMILY SSF51261 281 418 2.72E-40 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_2786 b47d77c99876de8b914988b66d174958 445 Pfam PF01551 Peptidase family M23 322 414 2.2E-23 T 13-10-2018 IPR016047 Peptidase M23 Thivi_2786 b47d77c99876de8b914988b66d174958 445 Gene3D G3DSA:2.70.70.10 281 419 4.5E-32 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_1548 6eed480efe458e6559ab9b533fbe91b2 65 SUPERFAMILY SSF47598 5 51 7.41E-8 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_1548 6eed480efe458e6559ab9b533fbe91b2 65 Pfam PF07878 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 16 47 2.5E-6 T 13-10-2018 IPR012869 CopG-like ribbon-helix-helix domain Thivi_4379 68662de8badff8422a5e1d7c23d49d8f 294 Gene3D G3DSA:3.30.420.10 121 280 8.6E-10 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_4379 68662de8badff8422a5e1d7c23d49d8f 294 Pfam PF00665 Integrase core domain 124 237 3.7E-25 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_4379 68662de8badff8422a5e1d7c23d49d8f 294 SUPERFAMILY SSF53098 116 279 8.04E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4379 68662de8badff8422a5e1d7c23d49d8f 294 Pfam PF13276 HTH-like domain 49 99 3.9E-11 T 13-10-2018 IPR025948 HTH-like domain Thivi_4593 3396093b48b666440a45c61db58b40ca 555 PIRSF PIRSF003128 1 555 1.4E-157 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Thivi_4593 3396093b48b666440a45c61db58b40ca 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.1E-166 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Thivi_4593 3396093b48b666440a45c61db58b40ca 555 Gene3D G3DSA:3.40.50.300 1 284 1.4E-44 T 13-10-2018 Thivi_4593 3396093b48b666440a45c61db58b40ca 555 Gene3D G3DSA:3.40.50.300 285 553 4.8E-52 T 13-10-2018 Thivi_4593 3396093b48b666440a45c61db58b40ca 555 SUPERFAMILY SSF52540 3 507 3.56E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4593 3396093b48b666440a45c61db58b40ca 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 508 7.6E-17 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Thivi_4593 3396093b48b666440a45c61db58b40ca 555 SUPERFAMILY SSF52540 1 217 5.93E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4086 390f53b20fda507c866f7664c5b073e1 547 Pfam PF03321 GH3 auxin-responsive promoter 19 513 3.7E-109 T 13-10-2018 IPR004993 GH3 family Reactome: R-HSA-6798695 Thivi_4086 390f53b20fda507c866f7664c5b073e1 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 97 108 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_4086 390f53b20fda507c866f7664c5b073e1 547 SUPERFAMILY SSF56801 53 116 5.89E-5 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 301 409 1.7E-17 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 785 882 1.12E-15 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 904 1004 6.54E-22 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 667 763 4.32E-15 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 1235 1323 1.05E-19 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 1466 1559 1.83E-22 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 920 1043 5.8E-34 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 329 443 1.8E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 1357 1487 6.9E-31 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 803 918 7.2E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 1238 1352 4.2E-33 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 684 798 9.7E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 197 327 2.6E-33 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 1488 1635 1.5E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 447 561 1.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Gene3D G3DSA:2.60.40.10 564 680 1.4E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 923 1033 1.3E-35 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 199 319 7.1E-33 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 1360 1483 8.3E-33 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 687 768 1.7E-14 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 1240 1348 5.6E-34 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 450 529 1.5E-15 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 1487 1627 1.3E-20 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 806 886 3.1E-14 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 568 648 2.0E-14 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 Pfam PF17210 SdrD B-like domain 332 412 1.4E-14 T 13-10-2018 IPR033764 SD-repeat containing protein, B domain Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 1333 1459 9.02E-22 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 427 527 2.62E-16 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 195 295 3.27E-19 T 13-10-2018 Thivi_2278 e28de418279a111fea0683d6ecdc55b7 1813 SUPERFAMILY SSF117074 547 644 2.35E-15 T 13-10-2018 Thivi_4513 e2cb7ed22ecbc73193397de8c7bd690a 101 SUPERFAMILY SSF143430 7 85 6.67E-22 T 13-10-2018 Thivi_4513 e2cb7ed22ecbc73193397de8c7bd690a 101 Gene3D G3DSA:3.30.70.240 4 72 9.5E-23 T 13-10-2018 Thivi_4513 e2cb7ed22ecbc73193397de8c7bd690a 101 Pfam PF09827 CRISPR associated protein Cas2 7 79 4.1E-20 T 13-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Thivi_4513 e2cb7ed22ecbc73193397de8c7bd690a 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 6 92 16.298 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Thivi_4513 e2cb7ed22ecbc73193397de8c7bd690a 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 89 4.9E-15 T 13-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Thivi_2808 daf8585267d823c062397e5fa77b1aed 291 Gene3D G3DSA:3.40.50.10140 3 132 4.1E-27 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_2808 daf8585267d823c062397e5fa77b1aed 291 SUPERFAMILY SSF52200 3 135 1.31E-25 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily Thivi_2808 daf8585267d823c062397e5fa77b1aed 291 SMART SM00255 2 133 0.0066 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Thivi_2808 daf8585267d823c062397e5fa77b1aed 291 Pfam PF13676 TIR domain 5 110 6.1E-23 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 Thivi_0819 142ada3e1240a747ebcc71fcef9b5986 71 Gene3D G3DSA:2.10.260.10 2 42 7.8E-8 T 13-10-2018 Thivi_0819 142ada3e1240a747ebcc71fcef9b5986 71 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 4 52 4.9E-11 T 13-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 Thivi_0819 142ada3e1240a747ebcc71fcef9b5986 71 SUPERFAMILY SSF89447 4 62 1.92E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_0819 142ada3e1240a747ebcc71fcef9b5986 71 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 4 56 1.0E-5 T 13-10-2018 Thivi_0819 142ada3e1240a747ebcc71fcef9b5986 71 SMART SM00966 4 49 2.9E-5 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 Pfam PF01750 Hydrogenase maturation protease 25 148 5.3E-29 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 PRINTS PR00446 Hydrogen uptake protein signature 72 88 8.7E-18 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 PRINTS PR00446 Hydrogen uptake protein signature 20 31 8.7E-18 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 PRINTS PR00446 Hydrogen uptake protein signature 40 57 8.7E-18 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 PRINTS PR00446 Hydrogen uptake protein signature 8 20 8.7E-18 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 PRINTS PR00446 Hydrogen uptake protein signature 61 71 8.7E-18 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 9 149 1.1E-41 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 SUPERFAMILY SSF53163 7 161 3.92E-42 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_3940 940f973c7786fcd6dd6cb0293c01838a 165 Gene3D G3DSA:3.40.50.1450 8 164 1.8E-43 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_2326 840cd37698b61425ae23c6b089347fde 322 Gene3D G3DSA:3.40.50.150 5 304 2.4E-103 T 13-10-2018 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 2 305 38.466 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 304 4.1E-109 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 Pfam PF01795 MraW methylase family 2 304 1.0E-106 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 SUPERFAMILY SSF81799 111 210 2.62E-32 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 Gene3D G3DSA:1.10.150.170 109 211 2.4E-103 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 PIRSF PIRSF004486 1 306 7.5E-101 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Thivi_2326 840cd37698b61425ae23c6b089347fde 322 SUPERFAMILY SSF53335 1 305 2.29E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2387 d49d1dd15402cf108a4face104b39dd4 239 SUPERFAMILY SSF53335 21 210 3.07E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2387 d49d1dd15402cf108a4face104b39dd4 239 Pfam PF13649 Methyltransferase domain 49 143 9.0E-11 T 13-10-2018 Thivi_2387 d49d1dd15402cf108a4face104b39dd4 239 Gene3D G3DSA:3.40.50.150 11 216 1.1E-26 T 13-10-2018 Thivi_2173 c7c19a90d0192112f167e8f6064bc95d 369 PIRSF PIRSF020979 4 367 1.9E-103 T 13-10-2018 IPR011215 Phosphoribosyl transferase Thivi_2173 c7c19a90d0192112f167e8f6064bc95d 369 Pfam PF15608 PELOTA RNA binding domain 291 364 6.7E-29 T 13-10-2018 IPR028157 PELOTA RNA-binding domain Thivi_2173 c7c19a90d0192112f167e8f6064bc95d 369 Pfam PF11202 Phosphoribosyl transferase (PRTase) 12 259 3.9E-96 T 13-10-2018 IPR011215 Phosphoribosyl transferase Thivi_3973 474063e9184904cd853978d9f9e442f6 292 Gene3D G3DSA:3.40.91.100 125 283 1.9E-15 T 13-10-2018 Thivi_3973 474063e9184904cd853978d9f9e442f6 292 Pfam PF04471 Restriction endonuclease 147 265 5.0E-28 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Thivi_3973 474063e9184904cd853978d9f9e442f6 292 Pfam PF14338 Mrr N-terminal domain 9 92 1.6E-22 T 13-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain Thivi_3973 474063e9184904cd853978d9f9e442f6 292 SUPERFAMILY SSF52980 153 267 4.93E-14 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 SUPERFAMILY SSF52540 29 426 1.76E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Gene3D G3DSA:3.40.50.300 161 421 1.1E-68 T 13-10-2018 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 38 754 47.351 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Gene3D G3DSA:3.40.50.300 653 745 1.5E-21 T 13-10-2018 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Gene3D G3DSA:3.40.50.300 431 577 3.7E-15 T 13-10-2018 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 29 608 8.2E-127 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 SUPERFAMILY SSF52540 345 737 7.35E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Pfam PF13604 AAA domain 210 383 5.3E-31 T 13-10-2018 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Gene3D G3DSA:1.10.10.1020 24 159 6.5E-13 T 13-10-2018 Thivi_2027 5e1381f49ec0550591c703fd90b44dc8 766 Pfam PF13538 UvrD-like helicase C-terminal domain 684 730 1.5E-15 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 35.507 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 8.3E-38 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 SUPERFAMILY SSF89360 11 105 6.28E-31 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 Gene3D G3DSA:2.60.300.12 11 116 1.7E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3083 444dc5454dcbb4ad6eba74d2fb39b166 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 111 3.3E-20 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Thivi_3288 fb14bc0bb48c31b2f87163a5ca0c5f4c 267 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 40 257 1.7E-67 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3288 fb14bc0bb48c31b2f87163a5ca0c5f4c 267 SUPERFAMILY SSF53955 89 259 1.27E-56 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3288 fb14bc0bb48c31b2f87163a5ca0c5f4c 267 Pfam PF00912 Transglycosylase 92 254 3.5E-46 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3288 fb14bc0bb48c31b2f87163a5ca0c5f4c 267 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 40 261 35.737 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3288 fb14bc0bb48c31b2f87163a5ca0c5f4c 267 Gene3D G3DSA:1.10.3810.10 88 264 3.0E-50 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 79 94 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 144 162 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 185 203 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 105 124 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 59 74 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 127 144 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 275 287 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 44 59 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 PRINTS PR01010 Flagellar P-ring protein signature 211 229 2.5E-89 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 388 40.471 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_0402 2d0ba49c36717a874a8b6dda025b9d66 388 Pfam PF02119 Flagellar P-ring protein 44 387 6.8E-147 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 Gene3D G3DSA:3.40.50.970 392 592 8.7E-33 T 13-10-2018 Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 SUPERFAMILY SSF52518 48 317 1.12E-32 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 Gene3D G3DSA:3.40.50.970 35 364 1.0E-36 T 13-10-2018 Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 405 554 2.8E-11 T 13-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 SUPERFAMILY SSF52922 584 737 1.52E-6 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 SUPERFAMILY SSF52518 388 578 1.95E-26 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 SMART SM00861 390 578 0.0018 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_1957 b1dda128db8aaeb42c553babb4dcc1b4 741 Pfam PF09364 XFP N-terminal domain 102 251 9.3E-7 T 13-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 SMART SM00421 144 201 4.4E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 SUPERFAMILY SSF46894 137 207 1.33E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 Gene3D G3DSA:3.40.50.12740 3 207 1.1E-55 T 13-10-2018 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 6.5E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 SUPERFAMILY SSF52172 2 129 2.13E-28 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 SMART SM00448 3 116 1.4E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 8.5E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 8.5E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 8.5E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3718 b5017a67504df3c941459f72e1b8beb9 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82866 866 1108 1.7E-37 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82693 187 372 4.81E-7 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82714 777 867 3.53E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82693 72 166 8.55E-23 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82866 343 538 1.1E-36 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Pfam PF00873 AcrB/AcrD/AcrF family 941 1108 6.9E-26 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Pfam PF00873 AcrB/AcrD/AcrF family 37 890 2.2E-122 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 70 88 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 408 429 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 490 513 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 515 538 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 381 404 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 42 66 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 PRINTS PR00702 Acriflavin resistance protein family signature 436 460 2.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.2090.10 217 307 5.0E-227 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:1.20.1640.10 563 1108 5.0E-227 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82693 613 728 1.03E-11 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.70.1430 72 876 5.0E-227 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:1.20.1640.10 48 562 5.0E-227 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 SUPERFAMILY SSF82714 222 305 4.32E-16 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.70.1320 166 377 5.0E-227 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.70.1430 615 726 5.0E-227 T 13-10-2018 Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.2090.10 774 868 5.0E-227 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3957 515e6cf042a230890d5b9358e68bdf99 1304 Gene3D G3DSA:3.30.70.1440 727 953 5.0E-227 T 13-10-2018 Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 105.733 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 Gene3D G3DSA:3.40.1280.10 1 164 2.1E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 PIRSF PIRSF000386 1 246 5.8E-89 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 225 2.9E-90 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 SUPERFAMILY SSF75217 1 243 2.68E-94 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 1.3E-57 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Thivi_4319 217a296b9924dc7c5a921c037ef23aed 249 Gene3D G3DSA:1.10.1270.20 165 248 3.6E-29 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Gene3D G3DSA:2.10.230.10 148 208 1.6E-37 T 13-10-2018 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 40.765 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 SMART SM00271 4 62 1.2E-29 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 SUPERFAMILY SSF49493 114 268 6.15E-21 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Gene3D G3DSA:1.10.287.110 1 116 1.6E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Gene3D G3DSA:2.60.260.20 255 364 7.2E-28 T 13-10-2018 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 SUPERFAMILY SSF49493 260 345 8.37E-22 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 SUPERFAMILY SSF57938 135 212 1.96E-21 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Pfam PF00684 DnaJ central domain 148 208 3.2E-13 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 PRINTS PR00625 DnaJ domain signature 62 81 4.3E-29 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 PRINTS PR00625 DnaJ domain signature 42 62 4.3E-29 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 PRINTS PR00625 DnaJ domain signature 25 40 4.3E-29 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 PRINTS PR00625 DnaJ domain signature 7 25 4.3E-29 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Pfam PF00226 DnaJ domain 5 67 3.6E-25 T 13-10-2018 IPR001623 DnaJ domain Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Pfam PF01556 DnaJ C terminal domain 122 334 3.3E-43 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 4.7E-133 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 Gene3D G3DSA:2.60.260.20 118 250 1.6E-37 T 13-10-2018 Thivi_4598 24a701f7d2125fafea415eb9143a0581 379 SUPERFAMILY SSF46565 1 111 3.14E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_1788 a381373e8926e0a8173ef571a9a4cfad 214 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 7 207 1.2E-31 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1788 a381373e8926e0a8173ef571a9a4cfad 214 Pfam PF01813 ATP synthase subunit D 14 202 3.7E-41 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1788 a381373e8926e0a8173ef571a9a4cfad 214 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 5 208 18.39 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_2358 e5a5a65b61b9fc258e954944e6bf84fc 111 Gene3D G3DSA:2.170.270.10 10 111 1.2E-12 T 13-10-2018 Thivi_2358 e5a5a65b61b9fc258e954944e6bf84fc 111 Pfam PF00856 SET domain 71 108 3.9E-7 T 13-10-2018 IPR001214 SET domain GO:0005515 Thivi_2358 e5a5a65b61b9fc258e954944e6bf84fc 111 SUPERFAMILY SSF82199 12 109 4.25E-16 T 13-10-2018 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Gene3D G3DSA:3.30.559.10 185 417 2.8E-92 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 187 415 3.9E-81 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 SUPERFAMILY SSF51230 2 91 2.09E-24 T 13-10-2018 IPR011053 Single hybrid motif Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Pfam PF02817 e3 binding domain 120 151 3.0E-11 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Gene3D G3DSA:4.10.320.10 115 157 9.8E-13 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 416 2.7E-167 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Pfam PF00364 Biotin-requiring enzyme 4 75 4.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 SUPERFAMILY SSF52777 187 415 9.34E-88 T 13-10-2018 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 SUPERFAMILY SSF47005 112 156 1.96E-10 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Thivi_3854 45a981dcecda7df63d17017f6e1d8773 417 Gene3D G3DSA:2.40.50.100 1 98 1.4E-22 T 13-10-2018 Thivi_2068 810be64d6a66ecd5d773284f2f87f161 575 SUPERFAMILY SSF82771 310 403 1.57E-9 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_2068 810be64d6a66ecd5d773284f2f87f161 575 SMART SM00465 308 404 2.2E-10 T 13-10-2018 IPR000305 GIY-YIG endonuclease Thivi_2068 810be64d6a66ecd5d773284f2f87f161 575 Gene3D G3DSA:3.40.1440.10 308 404 4.0E-9 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_2068 810be64d6a66ecd5d773284f2f87f161 575 Pfam PF01541 GIY-YIG catalytic domain 309 392 2.7E-10 T 13-10-2018 IPR000305 GIY-YIG endonuclease Thivi_2910 44efd2d771e36624cf923fd59190da91 490 Pfam PF00361 Proton-conducting membrane transporter 123 421 1.6E-50 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2910 44efd2d771e36624cf923fd59190da91 490 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 330 349 5.9E-11 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2910 44efd2d771e36624cf923fd59190da91 490 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 5.9E-11 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2910 44efd2d771e36624cf923fd59190da91 490 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 382 408 5.9E-11 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2910 44efd2d771e36624cf923fd59190da91 490 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 128 147 5.9E-11 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1596 2fc6d2e51276cf574b6bb55ef4a6a531 182 SUPERFAMILY SSF53955 9 144 2.39E-20 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_1596 2fc6d2e51276cf574b6bb55ef4a6a531 182 Gene3D G3DSA:1.10.530.10 7 155 1.3E-14 T 13-10-2018 Thivi_1828 195b62e1c6f3af1170f2ffe552a01b4d 581 SUPERFAMILY SSF52540 381 565 3.04E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1828 195b62e1c6f3af1170f2ffe552a01b4d 581 Gene3D G3DSA:3.40.50.300 379 565 2.5E-33 T 13-10-2018 Thivi_1828 195b62e1c6f3af1170f2ffe552a01b4d 581 Pfam PF01636 Phosphotransferase enzyme family 155 319 1.2E-6 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Thivi_1828 195b62e1c6f3af1170f2ffe552a01b4d 581 Pfam PF13671 AAA domain 383 529 3.6E-31 T 13-10-2018 Thivi_1828 195b62e1c6f3af1170f2ffe552a01b4d 581 SUPERFAMILY SSF56112 59 351 6.71E-23 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 Gene3D G3DSA:3.40.50.10800 119 342 2.8E-95 T 13-10-2018 Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 Gene3D G3DSA:3.40.50.10800 36 324 2.8E-95 T 13-10-2018 Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 33 343 1.0E-108 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 Pfam PF02445 Quinolinate synthetase A protein 36 342 4.6E-102 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 Gene3D G3DSA:3.40.50.10800 204 299 2.8E-95 T 13-10-2018 Thivi_3954 4de72966e1523b4be31afc9110e29a8f 355 SUPERFAMILY SSF142754 34 343 4.18E-107 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 544 39.624 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Gene3D G3DSA:2.40.50.140 572 682 8.1E-30 T 13-10-2018 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 SUPERFAMILY SSF57770 141 175 7.98E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 SUPERFAMILY SSF50249 577 681 8.08E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 5.6E-23 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 SUPERFAMILY SSF47323 388 546 4.3E-37 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 533 1.7E-171 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Gene3D G3DSA:1.10.730.10 387 525 9.6E-30 T 13-10-2018 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Gene3D G3DSA:3.40.50.620 7 382 1.1E-150 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Pfam PF01588 Putative tRNA binding domain 587 679 7.1E-22 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 SUPERFAMILY SSF52374 4 384 8.45E-98 T 13-10-2018 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Gene3D G3DSA:2.20.28.20 141 175 1.1E-150 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 Pfam PF09334 tRNA synthetases class I (M) 7 394 1.6E-153 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3353 61b0332f34a1d5ae0ec680f6d64e6910 682 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 564 682 8.7E-40 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 SUPERFAMILY SSF52540 111 329 3.64E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 SUPERFAMILY SSF50249 44 100 1.03E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 Gene3D G3DSA:2.40.50.140 40 98 1.7E-16 T 13-10-2018 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 43 331 29.588 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 Gene3D G3DSA:3.40.50.300 100 271 5.1E-37 T 13-10-2018 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 Pfam PF03193 RsgA GTPase 97 271 2.8E-40 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 Gene3D G3DSA:1.10.40.50 273 331 1.6E-20 T 13-10-2018 Thivi_4069 bec3a7b5e30572b0d2d81567a16eb300 331 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 77 328 9.4E-61 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 SUPERFAMILY SSF50800 74 168 1.45E-25 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 Pfam PF00224 Pyruvate kinase, barrel domain 6 337 5.7E-116 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 Gene3D G3DSA:3.40.1380.20 337 429 1.1E-153 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 Gene3D G3DSA:2.40.33.10 74 170 1.1E-153 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 445 5.9E-147 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 Gene3D G3DSA:3.20.20.60 7 336 1.1E-153 T 13-10-2018 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 364 430 6.8E-13 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 SUPERFAMILY SSF51621 6 341 4.19E-88 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 SUPERFAMILY SSF52935 324 460 5.04E-22 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 295 313 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 314 330 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 270 294 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 218 244 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2419 c69d0166f87fe246958cc3f823f31298 482 PRINTS PR01050 Pyruvate kinase family signature 245 269 1.8E-59 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Pfam PF00005 ABC transporter 379 531 3.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 SMART SM00382 387 580 3.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 SMART SM00382 34 233 2.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 4.0E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 582 647 2.1E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.8E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 580 667 2.3E-24 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Gene3D G3DSA:3.40.50.300 3 333 5.0E-103 T 13-10-2018 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Gene3D G3DSA:3.40.50.300 349 681 5.7E-98 T 13-10-2018 Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 SUPERFAMILY SSF52540 352 602 5.53E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 SUPERFAMILY SSF52540 5 254 4.67E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0898 7c96d604452fd843bcd8089d8fcbc82a 684 Pfam PF00005 ABC transporter 26 183 3.2E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SMART SM00304 610 662 100.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SMART SM00304 336 387 7.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SMART SM00304 557 609 0.011 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SUPERFAMILY SSF55785 384 504 9.95E-7 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 Gene3D G3DSA:1.10.287.950 557 859 3.3E-85 T 13-10-2018 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SMART SM00283 610 857 5.1E-90 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 SUPERFAMILY SSF58104 577 858 4.19E-73 T 13-10-2018 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 Pfam PF08376 Nitrate and nitrite sensing 56 294 1.2E-47 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 Gene3D G3DSA:3.30.450.20 394 513 1.2E-40 T 13-10-2018 Thivi_1211 0bd010d1e20f07c31ad017a689b23dbb 921 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 669 825 1.8E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0015 c440210f5abbf5863d5879f064858146 364 Gene3D G3DSA:3.40.718.10 26 362 3.1E-129 T 13-10-2018 Thivi_0015 c440210f5abbf5863d5879f064858146 364 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 29 352 3.9E-109 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Thivi_0015 c440210f5abbf5863d5879f064858146 364 PIRSF PIRSF002465 25 358 5.3E-126 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Thivi_0015 c440210f5abbf5863d5879f064858146 364 Hamap MF_00019 Phosphate acyltransferase [plsX]. 28 359 139.871 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Thivi_0015 c440210f5abbf5863d5879f064858146 364 SUPERFAMILY SSF53659 28 352 3.13E-107 T 13-10-2018 Thivi_0015 c440210f5abbf5863d5879f064858146 364 Pfam PF02504 Fatty acid synthesis protein 28 344 2.4E-106 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 193 24.996 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Pfam PF00037 4Fe-4S binding domain 164 184 3.4E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Pfam PF04060 Putative Fe-S cluster 44 76 4.1E-13 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Gene3D G3DSA:3.20.20.20 37 119 7.7E-11 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 SUPERFAMILY SSF54862 137 234 7.38E-13 T 13-10-2018 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Gene3D G3DSA:3.30.70.20 137 195 2.5E-11 T 13-10-2018 Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3179 146170949d0d4c4ec71635c8880d0b8d 288 Gene3D G3DSA:3.30.70.20 211 264 1.7E-5 T 13-10-2018 Thivi_2870 b90f751272d4deb64b52955983f2bd55 235 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 33 1.9E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2870 b90f751272d4deb64b52955983f2bd55 235 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2870 b90f751272d4deb64b52955983f2bd55 235 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 1.3E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 Gene3D G3DSA:3.30.700.10 7 132 1.8E-22 T 13-10-2018 Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 113 4.8E-24 T 13-10-2018 IPR031982 Type IV minor pilin ComP Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 4.8E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 SUPERFAMILY SSF54523 7 121 3.53E-22 T 13-10-2018 Thivi_2142 ab82d01998807a0ad5de6f94bb2632c0 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.3E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0239 89269f415a4363d6d3ec985ad061fd01 199 SUPERFAMILY SSF52540 1 196 1.52E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0239 89269f415a4363d6d3ec985ad061fd01 199 Pfam PF01121 Dephospho-CoA kinase 3 176 2.1E-58 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Thivi_0239 89269f415a4363d6d3ec985ad061fd01 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 5.7E-50 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Thivi_0239 89269f415a4363d6d3ec985ad061fd01 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 27.241 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Thivi_0239 89269f415a4363d6d3ec985ad061fd01 199 Gene3D G3DSA:3.40.50.300 1 199 3.4E-66 T 13-10-2018 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 Gene3D G3DSA:3.30.1400.10 110 245 2.1E-40 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 SUPERFAMILY SSF64383 115 241 9.94E-34 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 Hamap MF_00509 Cell division protein ZipA [zipA]. 4 242 17.669 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 115 238 8.5E-42 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 SMART SM00771 111 240 9.6E-33 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Thivi_4488 c99e1c1c366c2bcd2d4c1dcb46bcd9aa 253 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 114 241 5.0E-19 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 37 44 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 3 436 2.2E-176 T 13-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 Gene3D G3DSA:3.40.50.1980 167 288 6.6E-39 T 13-10-2018 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 SUPERFAMILY SSF53807 7 437 2.29E-117 T 13-10-2018 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 21 434 4.5E-105 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 Gene3D G3DSA:3.40.50.1980 315 438 8.8E-36 T 13-10-2018 Thivi_2739 3edea5eb9f61cc494ec5c5c44d48abc1 465 Gene3D G3DSA:3.40.50.1980 19 161 3.7E-38 T 13-10-2018 Thivi_4033 d7a04b242dd0f95349259ece96759edc 443 Pfam PF04932 O-Antigen ligase 201 337 9.0E-17 T 13-10-2018 IPR007016 O-antigen ligase-related Thivi_4033 d7a04b242dd0f95349259ece96759edc 443 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 402 2.9E-155 T 13-10-2018 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:3.30.190.20 130 239 4.1E-239 T 13-10-2018 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:3.40.50.300 620 941 2.3E-139 T 13-10-2018 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 SUPERFAMILY SSF52540 625 918 1.6E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:3.40.50.300 6 600 4.1E-239 T 13-10-2018 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Pfam PF00005 ABC transporter 811 865 6.9E-5 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:1.10.8.280 287 401 4.1E-239 T 13-10-2018 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 945 22.414 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 930 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 SUPERFAMILY SSF52540 1 575 7.33E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 ProSitePatterns PS00211 ABC transporters family signature. 835 849 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:1.20.1580.10 698 835 2.3E-139 T 13-10-2018 Thivi_2472 6828ab94df9cf5a477c3cdc11493a325 949 Gene3D G3DSA:1.20.1580.10 90 498 4.1E-239 T 13-10-2018 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 76 337 5.0E-46 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 Gene3D G3DSA:3.20.20.10 65 342 1.9E-213 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PIRSF PIRSF001336 2 626 3.9E-224 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 TIGRFAM TIGR01273 speA: arginine decarboxylase 5 625 7.1E-230 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 317 334 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 166 187 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 140 155 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 454 475 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 479 504 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 88 102 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 64 79 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 533 554 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01180 Arginine decarboxylase signature 190 212 2.8E-68 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 Gene3D G3DSA:2.40.37.10 12 558 1.9E-213 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 96 114 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 Gene3D G3DSA:1.20.58.930 359 450 1.9E-213 T 13-10-2018 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 SUPERFAMILY SSF51419 65 339 1.11E-64 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 271 284 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 327 346 3.5E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 117 129 3.5E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 533 546 3.5E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 233 246 3.5E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2693 21bb90effa7310fde11de7bf4edbdee5 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 3.5E-15 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Thivi_2471 a0518dc0a43d995a574017cc743ebc78 448 Gene3D G3DSA:3.30.70.100 389 444 6.6E-6 T 13-10-2018 Thivi_2471 a0518dc0a43d995a574017cc743ebc78 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Thivi_2471 a0518dc0a43d995a574017cc743ebc78 448 Pfam PF07690 Major Facilitator Superfamily 14 347 2.6E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_2471 a0518dc0a43d995a574017cc743ebc78 448 Gene3D G3DSA:1.20.1250.20 1 386 5.9E-81 T 13-10-2018 Thivi_2471 a0518dc0a43d995a574017cc743ebc78 448 SUPERFAMILY SSF103473 4 382 1.7E-60 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 SMART SM00091 85 151 2.9E-5 T 13-10-2018 IPR000014 PAS domain Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 SMART SM00387 331 425 1.9E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 Pfam PF08448 PAS fold 95 200 2.2E-8 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 Gene3D G3DSA:3.30.450.20 72 205 1.9E-18 T 13-10-2018 Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 SUPERFAMILY SSF55785 72 197 8.9E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 SMART SM00086 157 199 0.0014 T 13-10-2018 IPR001610 PAC motif Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 Gene3D G3DSA:3.30.565.10 304 424 2.5E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 Pfam PF07730 Histidine kinase 227 293 4.0E-15 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 SUPERFAMILY SSF55874 298 422 4.32E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 423 2.2E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4106 68d827615a6186a02f409b94f7ad4777 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 83 206 4.2E-12 T 13-10-2018 IPR000014 PAS domain Thivi_0858 f59dd5942e151c1ed0bc00a90a98741c 88 Gene3D G3DSA:1.10.10.10 5 55 3.7E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0858 f59dd5942e151c1ed0bc00a90a98741c 88 SUPERFAMILY SSF88659 6 53 7.29E-6 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0858 f59dd5942e151c1ed0bc00a90a98741c 88 Pfam PF02001 Protein of unknown function DUF134 4 62 4.7E-17 T 13-10-2018 IPR002852 Uncharacterised protein family UPF0251 Thivi_0654 e05719f3957b07c597fd2ab662b4a5ff 222 Pfam PF05036 Sporulation related domain 147 213 3.7E-14 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Thivi_0654 e05719f3957b07c597fd2ab662b4a5ff 222 SUPERFAMILY SSF110997 147 219 2.48E-14 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_0654 e05719f3957b07c597fd2ab662b4a5ff 222 Gene3D G3DSA:3.30.70.1070 141 219 1.9E-10 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_1466 4258c3d7752ddc78e27008bcce75c448 389 SUPERFAMILY SSF54862 286 354 4.04E-14 T 13-10-2018 Thivi_1466 4258c3d7752ddc78e27008bcce75c448 389 Gene3D G3DSA:3.30.70.20 272 366 1.4E-11 T 13-10-2018 Thivi_1466 4258c3d7752ddc78e27008bcce75c448 389 Pfam PF00037 4Fe-4S binding domain 327 348 1.1E-4 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1466 4258c3d7752ddc78e27008bcce75c448 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 332 343 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 PIRSF PIRSF000447 1 412 4.5E-189 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.1E-62 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 6.8E-39 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 SUPERFAMILY SSF53901 214 411 1.62E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 Gene3D G3DSA:3.40.47.10 1 255 8.0E-94 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 Gene3D G3DSA:3.40.47.10 257 401 7.6E-57 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.1E-198 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 SUPERFAMILY SSF53901 4 252 5.15E-81 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0020 f40263bc6ce928bc65d5ffc12c711df4 412 SMART SM00825 Beta-ketoacyl synthase 6 408 7.0E-20 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 SUPERFAMILY SSF53098 305 522 3.67E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 SUPERFAMILY SSF50610 518 592 6.02E-17 T 13-10-2018 IPR009004 Transposase, Mu, C-terminal Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 SUPERFAMILY SSF46955 1 61 2.47E-16 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 Gene3D G3DSA:3.30.420.10 293 524 3.9E-53 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 Pfam PF09299 Mu transposase, C-terminal 532 590 2.4E-15 T 13-10-2018 IPR015378 Transposase-like, Mu, C-terminal Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 Pfam PF00665 Integrase core domain 307 426 4.4E-13 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 Gene3D G3DSA:1.10.10.10 1 67 1.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4390 52b1b66dc7b215f2872b63beac3592c0 769 Pfam PF02316 Mu DNA-binding domain 9 60 3.0E-12 T 13-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Thivi_0003 0d3d4b4e45ab4ba222b6ba69a3bcc554 395 SUPERFAMILY SSF53383 7 392 1.79E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0003 0d3d4b4e45ab4ba222b6ba69a3bcc554 395 Pfam PF00155 Aminotransferase class I and II 35 374 2.5E-56 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_0003 0d3d4b4e45ab4ba222b6ba69a3bcc554 395 Gene3D G3DSA:3.90.1150.10 292 389 1.4E-129 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_0003 0d3d4b4e45ab4ba222b6ba69a3bcc554 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Thivi_0003 0d3d4b4e45ab4ba222b6ba69a3bcc554 395 Gene3D G3DSA:3.40.640.10 67 291 1.4E-129 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 4.0E-8 T 13-10-2018 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.6E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 SUPERFAMILY SSF57840 1 37 3.79E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.688 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4222 9bba5761a1ef677b3bcccb6d153f0019 37 Pfam PF00444 Ribosomal protein L36 1 37 8.3E-20 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4065 aa6f80bcd7da9eeaefb1844be0e43de5 389 Gene3D G3DSA:3.40.50.2000 6 177 5.7E-91 T 13-10-2018 Thivi_4065 aa6f80bcd7da9eeaefb1844be0e43de5 389 Gene3D G3DSA:3.40.50.2000 178 367 5.7E-91 T 13-10-2018 Thivi_4065 aa6f80bcd7da9eeaefb1844be0e43de5 389 Pfam PF13439 Glycosyltransferase Family 4 32 181 3.6E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_4065 aa6f80bcd7da9eeaefb1844be0e43de5 389 Pfam PF00534 Glycosyl transferases group 1 191 359 5.5E-35 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_4065 aa6f80bcd7da9eeaefb1844be0e43de5 389 SUPERFAMILY SSF53756 4 379 3.45E-74 T 13-10-2018 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 Gene3D G3DSA:2.40.50.140 1 65 5.4E-30 T 13-10-2018 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 SMART SM00357 3 67 2.8E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 PIRSF PIRSF002599 1 67 7.0E-25 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 SUPERFAMILY SSF50249 1 66 1.26E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_1723 1d4a27eab26602e1112060dff2b4d38b 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.2E-31 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_0383 49a7822033899bec4a598bda2e6a08d3 304 SUPERFAMILY SSF103088 150 275 4.84E-31 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0383 49a7822033899bec4a598bda2e6a08d3 304 Gene3D G3DSA:3.30.1330.60 129 278 5.2E-45 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0383 49a7822033899bec4a598bda2e6a08d3 304 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 7.3E-20 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Thivi_0383 49a7822033899bec4a598bda2e6a08d3 304 Pfam PF00691 OmpA family 171 269 1.4E-19 T 13-10-2018 IPR006665 OmpA-like domain Thivi_2436 abcae781853e2ff792060462a5560e15 309 Pfam PF01040 UbiA prenyltransferase family 36 283 4.1E-35 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Thivi_2436 abcae781853e2ff792060462a5560e15 309 PIRSF PIRSF005355 12 307 2.3E-83 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 Thivi_2436 abcae781853e2ff792060462a5560e15 309 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 28 301 9.8E-53 T 13-10-2018 Thivi_2436 abcae781853e2ff792060462a5560e15 309 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 19 303 20.272 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 Gene3D G3DSA:1.25.40.20 22 194 5.9E-46 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 Pfam PF12796 Ankyrin repeats (3 copies) 38 124 3.5E-14 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 SUPERFAMILY SSF48403 34 184 1.61E-39 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 SMART SM00248 130 159 0.0066 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 SMART SM00248 63 92 0.0038 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 SMART SM00248 96 125 0.0068 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 SMART SM00248 163 192 240.0 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_0767 48d99bebe9ccb96d243c35b605727654 194 Pfam PF13857 Ankyrin repeats (many copies) 125 169 1.4E-9 T 13-10-2018 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 TIGRFAM TIGR00492 alr: alanine racemase 9 358 2.8E-105 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 Pfam PF00842 Alanine racemase, C-terminal domain 237 358 3.4E-40 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 Pfam PF01168 Alanine racemase, N-terminal domain 12 223 2.2E-69 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 35 45 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 Gene3D G3DSA:2.40.37.10 12 357 9.3E-125 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 Hamap MF_01201 Alanine racemase. 5 361 34.636 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 196 223 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 159 170 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 253 268 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 270 285 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 125 137 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 65 83 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 343 356 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 291 308 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 PRINTS PR00992 Alanine racemase signature 30 46 4.8E-68 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 SUPERFAMILY SSF50621 231 360 1.5E-44 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 Gene3D G3DSA:3.20.20.10 14 221 9.3E-125 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 SUPERFAMILY SSF51419 12 238 1.11E-72 T 13-10-2018 IPR029066 PLP-binding barrel Thivi_3766 900fa8c8e5cb7f2d824b90d1d073c072 368 SMART SM01005 237 361 4.1E-63 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Thivi_4356 fe1d391b7a92733efb79b8afe6637a65 340 SUPERFAMILY SSF52172 1 120 1.25E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4356 fe1d391b7a92733efb79b8afe6637a65 340 Gene3D G3DSA:3.40.50.2300 1 124 7.5E-31 T 13-10-2018 Thivi_4356 fe1d391b7a92733efb79b8afe6637a65 340 SMART SM00448 1 114 2.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4356 fe1d391b7a92733efb79b8afe6637a65 340 Pfam PF00072 Response regulator receiver domain 3 110 1.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 138 161 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 Gene3D G3DSA:3.40.50.170 3 211 3.0E-84 T 13-10-2018 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 192 30.7 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 195 9.3E-72 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 Pfam PF00551 Formyl transferase 9 186 4.0E-56 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_1140 3b1dd71d57b9a37c6a4e9d05ee8d9e06 212 SUPERFAMILY SSF53328 9 200 3.92E-67 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Thivi_2437 c76e4db7146de20325048d848536df8d 291 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 22 290 54.057 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Thivi_2437 c76e4db7146de20325048d848536df8d 291 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 129 149 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Thivi_2437 c76e4db7146de20325048d848536df8d 291 TIGRFAM TIGR01929 menB: naphthoate synthase 30 287 8.6E-134 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Thivi_2437 c76e4db7146de20325048d848536df8d 291 Gene3D G3DSA:3.90.226.10 13 228 8.2E-76 T 13-10-2018 Thivi_2437 c76e4db7146de20325048d848536df8d 291 Gene3D G3DSA:1.10.12.10 229 279 9.4E-28 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Thivi_2437 c76e4db7146de20325048d848536df8d 291 SUPERFAMILY SSF52096 28 286 5.35E-77 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_2437 c76e4db7146de20325048d848536df8d 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 38 285 2.3E-77 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 463 700 1.3E-74 T 13-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Gene3D G3DSA:3.40.50.2000 23 432 5.0E-143 T 13-10-2018 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Pfam PF13439 Glycosyltransferase Family 4 26 221 1.0E-16 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 SUPERFAMILY SSF56784 463 673 3.48E-26 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Gene3D G3DSA:3.90.1070.10 550 619 4.2E-64 T 13-10-2018 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 1 437 2.1E-203 T 13-10-2018 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Gene3D G3DSA:3.40.50.2000 218 426 5.0E-143 T 13-10-2018 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Gene3D G3DSA:3.40.50.1000 465 697 4.2E-64 T 13-10-2018 IPR023214 HAD superfamily Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 465 700 5.4E-89 T 13-10-2018 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 Pfam PF00534 Glycosyl transferases group 1 246 417 3.9E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 SUPERFAMILY SSF53756 21 438 2.08E-71 T 13-10-2018 Thivi_1158 5af3d6d464e96e1c7670297ebf59a55c 711 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 465 663 9.9E-14 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Thivi_1035 09ef455e9114f8647ccc6e9d0d0c1269 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 1.8E-54 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1035 09ef455e9114f8647ccc6e9d0d0c1269 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 31.583 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1035 09ef455e9114f8647ccc6e9d0d0c1269 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 153 2.1E-58 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1035 09ef455e9114f8647ccc6e9d0d0c1269 157 SUPERFAMILY SSF52121 11 156 5.1E-61 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1035 09ef455e9114f8647ccc6e9d0d0c1269 157 Gene3D G3DSA:3.40.50.960 3 157 3.5E-61 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_2103 e949a6d777a6fad50a4969599f385fcc 444 Pfam PF00534 Glycosyl transferases group 1 296 409 1.4E-8 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_2103 e949a6d777a6fad50a4969599f385fcc 444 Gene3D G3DSA:3.40.50.11720 50 219 9.6E-50 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Thivi_2103 e949a6d777a6fad50a4969599f385fcc 444 Gene3D G3DSA:3.40.50.2000 227 414 1.4E-67 T 13-10-2018 Thivi_2103 e949a6d777a6fad50a4969599f385fcc 444 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 45 220 7.9E-66 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Thivi_2103 e949a6d777a6fad50a4969599f385fcc 444 SUPERFAMILY SSF53756 90 414 3.59E-17 T 13-10-2018 Thivi_2134 ed79520b93a9f5db4ed9af102f6230d1 313 Pfam PF03747 ADP-ribosylglycohydrolase 26 282 7.0E-57 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Thivi_2134 ed79520b93a9f5db4ed9af102f6230d1 313 Gene3D G3DSA:1.10.4080.10 17 312 7.0E-90 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2134 ed79520b93a9f5db4ed9af102f6230d1 313 TIGRFAM TIGR02662 dinitro_DRAG: ADP-ribosyl-[dinitrogen reductase] hydrolase 21 307 1.6E-118 T 13-10-2018 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase Thivi_2134 ed79520b93a9f5db4ed9af102f6230d1 313 SUPERFAMILY SSF101478 19 290 1.03E-69 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 SUPERFAMILY SSF47384 669 750 4.71E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 SMART SM00387 795 915 2.1E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 795 913 3.1E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 SMART SM00388 682 749 5.5E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 SUPERFAMILY SSF55874 738 920 5.76E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 682 749 3.1E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 Gene3D G3DSA:1.10.287.130 664 750 4.7E-23 T 13-10-2018 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 855 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 875 893 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 899 912 1.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 Gene3D G3DSA:3.30.565.10 751 916 1.1E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2108 265e46e9882b36a237d91ee6657f29fe 925 Gene3D G3DSA:1.20.1730.10 38 484 2.7E-21 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_2465 445d3f242babc0e234829713b61fbb92 541 Pfam PF07730 Histidine kinase 324 391 1.1E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Thivi_2465 445d3f242babc0e234829713b61fbb92 541 SUPERFAMILY SSF55781 151 311 1.66E-12 T 13-10-2018 Thivi_2465 445d3f242babc0e234829713b61fbb92 541 Gene3D G3DSA:3.30.450.40 148 312 7.4E-13 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2465 445d3f242babc0e234829713b61fbb92 541 SMART SM00387 430 527 1.9E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2465 445d3f242babc0e234829713b61fbb92 541 Gene3D G3DSA:3.30.565.10 390 529 1.5E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2465 445d3f242babc0e234829713b61fbb92 541 PIRSF PIRSF003167 56 537 9.8E-98 T 13-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 Thivi_2465 445d3f242babc0e234829713b61fbb92 541 SUPERFAMILY SSF55874 391 523 1.25E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 Pfam PF03572 Peptidase family S41 206 370 4.9E-57 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 382 1.1E-105 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 Gene3D G3DSA:2.30.42.10 107 194 6.4E-95 T 13-10-2018 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 SUPERFAMILY SSF52096 45 376 7.62E-80 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 SMART SM00245 180 372 8.8E-71 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 Gene3D G3DSA:3.90.226.10 195 369 6.4E-95 T 13-10-2018 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 SMART SM00228 107 178 1.5E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 Gene3D G3DSA:3.30.750.44 54 347 6.4E-95 T 13-10-2018 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 SUPERFAMILY SSF50156 96 190 5.11E-20 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_2785 b4f0b2a1e8dad19ed1d6f336106c8b4e 440 Pfam PF13180 PDZ domain 107 186 1.2E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.6E-47 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 SUPERFAMILY SSF75217 1 154 2.62E-48 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 2.2E-51 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 Gene3D G3DSA:3.40.1280.10 1 157 2.2E-47 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 PIRSF PIRSF004505 1 155 1.9E-41 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Thivi_4098 61eeee2d395125c2153bbe51fbb508d1 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.365 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 SUPERFAMILY SSF51649 140 457 5.63E-109 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 145 442 6.5E-113 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 Gene3D G3DSA:3.30.70.150 7 138 1.0E-48 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 14 132 2.0E-36 T 13-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 SUPERFAMILY SSF54966 4 139 5.89E-47 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 Gene3D G3DSA:3.20.20.110 139 441 4.6E-128 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 3 461 77.121 T 13-10-2018 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_4238 cfedd997a6699677295e34eac9d87d1a 464 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 188 196 - T 13-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_0826 78fb84088645a587a6f83d362c21446c 1335 Pfam PF01935 Domain of unknown function DUF87 985 1185 5.6E-9 T 13-10-2018 IPR002789 Helicase HerA, central domain Thivi_0826 78fb84088645a587a6f83d362c21446c 1335 SUPERFAMILY SSF52540 935 1307 1.63E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 Gene3D G3DSA:3.50.50.60 1 166 4.8E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 SUPERFAMILY SSF54373 408 487 2.04E-9 T 13-10-2018 Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 Pfam PF05199 GMC oxidoreductase 430 550 2.0E-19 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 Gene3D G3DSA:3.50.50.60 224 307 2.9E-7 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 Gene3D G3DSA:3.50.50.60 473 563 9.1E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 SUPERFAMILY SSF51905 1 558 1.56E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4506 d58c0129e305d98c5421dcc88ae34e17 565 Pfam PF00732 GMC oxidoreductase 9 300 1.1E-9 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 PIRSF PIRSF015855 17 689 3.5E-132 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 477 491 2.4E-9 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 122 134 2.4E-9 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 191 210 2.4E-9 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 Pfam PF01555 DNA methylase 122 497 3.7E-29 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_4337 db474b9b2aade326464a14153222a7b4 690 SUPERFAMILY SSF53335 91 521 9.2E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2188 444d670eee00a51b2e845e813dcccf56 335 Gene3D G3DSA:3.40.1750.20 186 252 4.6E-60 T 13-10-2018 Thivi_2188 444d670eee00a51b2e845e813dcccf56 335 Pfam PF01343 Peptidase family S49 145 288 1.3E-32 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Thivi_2188 444d670eee00a51b2e845e813dcccf56 335 Gene3D G3DSA:3.90.226.10 81 283 4.6E-60 T 13-10-2018 Thivi_2188 444d670eee00a51b2e845e813dcccf56 335 SUPERFAMILY SSF52096 67 282 2.08E-40 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_4461 4655ae8f8cdb2d30bab88d364144ee80 454 SUPERFAMILY SSF116734 30 192 1.8E-17 T 13-10-2018 Thivi_4461 4655ae8f8cdb2d30bab88d364144ee80 454 Gene3D G3DSA:3.90.220.20 424 433 4.3E-21 T 13-10-2018 Thivi_4461 4655ae8f8cdb2d30bab88d364144ee80 454 SUPERFAMILY SSF116734 305 430 8.67E-9 T 13-10-2018 Thivi_4461 4655ae8f8cdb2d30bab88d364144ee80 454 Gene3D G3DSA:3.90.220.20 26 213 2.9E-19 T 13-10-2018 Thivi_4461 4655ae8f8cdb2d30bab88d364144ee80 454 Gene3D G3DSA:3.90.220.20 264 423 4.3E-21 T 13-10-2018 Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 SMART SM00062 43 273 6.5E-36 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 Gene3D G3DSA:3.40.190.10 33 264 3.7E-43 T 13-10-2018 Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 SUPERFAMILY SSF53850 35 268 1.36E-40 T 13-10-2018 Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 263 2.1E-23 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_3660 98c44e4865a629dc89e55ca3b82bbecc 349 Gene3D G3DSA:3.40.190.10 135 231 3.7E-43 T 13-10-2018 Thivi_1659 263fac8c0934148829ce2b41321feb4d 442 Pfam PF13476 AAA domain 6 91 3.2E-7 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Thivi_1659 263fac8c0934148829ce2b41321feb4d 442 Gene3D G3DSA:3.40.50.300 5 101 1.4E-5 T 13-10-2018 Thivi_1659 263fac8c0934148829ce2b41321feb4d 442 Gene3D G3DSA:3.40.50.300 139 269 4.8E-7 T 13-10-2018 Thivi_1659 263fac8c0934148829ce2b41321feb4d 442 SUPERFAMILY SSF52540 17 259 5.34E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1166 1d0475f14d942719d6e054e4981878a6 206 Gene3D G3DSA:1.10.1760.20 2 196 4.4E-42 T 13-10-2018 Thivi_1166 1d0475f14d942719d6e054e4981878a6 206 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 3 197 5.2E-53 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 SUPERFAMILY SSF53335 41 333 1.48E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 Pfam PF01555 DNA methylase 65 329 3.7E-37 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 290 308 2.1E-25 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 271 288 2.1E-25 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 97 117 2.1E-25 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 64 78 2.1E-25 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 313 333 2.1E-25 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3099 f04b685494c6966bbab51aa4c9019d53 334 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 69 74 - T 13-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 2.0E-47 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 Pfam PF01668 SmpB protein 15 157 4.5E-56 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 SUPERFAMILY SSF74982 10 139 8.63E-48 T 13-10-2018 IPR023620 Small protein B Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 69.064 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 6.0E-51 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 Thivi_3908 4c99a3e71dc454e9b4cab8d5b53e7f48 159 Gene3D G3DSA:2.40.280.10 7 136 3.7E-45 T 13-10-2018 IPR023620 Small protein B Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 SUPERFAMILY SSF56553 55 178 4.36E-37 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Gene3D G3DSA:2.170.120.12 55 177 9.8E-79 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 SMART SM00662 25 234 2.3E-88 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 321 33.23 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Gene3D G3DSA:3.30.1360.10 24 228 9.8E-79 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 SUPERFAMILY SSF47789 254 330 1.31E-25 T 13-10-2018 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Gene3D G3DSA:1.10.150.20 249 333 3.5E-36 T 13-10-2018 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 260 332 5.0E-32 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 1.3E-20 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 SUPERFAMILY SSF55257 10 231 1.67E-27 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 26 320 1.4E-101 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 31 228 2.0E-21 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_4226 c128ce7489065ba425c7e6e74fa2e322 336 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 255 312 7.4E-23 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 887 897 6.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 928 941 6.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 869 883 6.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 PRINTS PR00344 Bacterial sensor protein C-terminal signature 904 922 6.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00388 717 782 1.1E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF08447 PAS fold 589 672 4.8E-15 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00091 565 631 6.8E-4 T 13-10-2018 IPR000014 PAS domain Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00091 150 216 0.93 T 13-10-2018 IPR000014 PAS domain Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00091 276 343 0.0079 T 13-10-2018 IPR000014 PAS domain Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF55785 552 677 4.35E-23 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.450.20 266 399 5.8E-18 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00086 355 398 0.029 T 13-10-2018 IPR001610 PAC motif Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00086 222 264 1.9E-5 T 13-10-2018 IPR001610 PAC motif Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00086 637 679 8.5E-10 T 13-10-2018 IPR001610 PAC motif Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.565.10 781 945 3.9E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF00512 His Kinase A (phospho-acceptor) domain 717 782 1.9E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF52172 968 1088 2.99E-40 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF55874 772 939 3.54E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.450.40 400 561 3.9E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 828 943 2.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.450.20 146 265 8.3E-19 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF55785 260 392 6.46E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF00072 Response regulator receiver domain 972 1083 9.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.40.50.12740 969 1089 4.3E-44 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 271 6.4E-9 T 13-10-2018 IPR000014 PAS domain Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 561 686 9.9E-15 T 13-10-2018 IPR000014 PAS domain Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.450.20 26 141 1.2E-8 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:3.30.450.20 562 675 3.0E-25 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF55785 139 262 3.54E-17 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF47384 702 783 1.24E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Gene3D G3DSA:1.10.287.130 680 780 2.8E-27 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SUPERFAMILY SSF55781 420 564 1.25E-14 T 13-10-2018 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00448 970 1083 6.3E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 SMART SM00387 828 944 9.5E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF08448 PAS fold 282 400 5.1E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0413 4cef4990e2f20411a3c5634e2f378861 1091 Pfam PF08448 PAS fold 156 264 2.7E-7 T 13-10-2018 IPR013656 PAS fold-4 Thivi_3281 4b609dce5deaa60d7015c012865f48dc 346 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 43 341 7.0E-107 T 13-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent Thivi_3281 4b609dce5deaa60d7015c012865f48dc 346 PIRSF PIRSF018005 20 343 1.7E-117 T 13-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 Thivi_3281 4b609dce5deaa60d7015c012865f48dc 346 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 42 339 4.0E-123 T 13-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 Thivi_3281 4b609dce5deaa60d7015c012865f48dc 346 SUPERFAMILY SSF53335 89 334 4.95E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3281 4b609dce5deaa60d7015c012865f48dc 346 Gene3D G3DSA:3.40.50.150 69 245 6.1E-48 T 13-10-2018 Thivi_4449 d075cea0c6a277e027f1875e9d801dd7 175 SUPERFAMILY SSF53271 4 172 1.61E-51 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_4449 d075cea0c6a277e027f1875e9d801dd7 175 Pfam PF00156 Phosphoribosyl transferase domain 42 153 5.2E-16 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Thivi_4449 d075cea0c6a277e027f1875e9d801dd7 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 36.869 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Thivi_4449 d075cea0c6a277e027f1875e9d801dd7 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 6.5E-67 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Thivi_4449 d075cea0c6a277e027f1875e9d801dd7 175 Gene3D G3DSA:3.40.50.2020 1 175 9.8E-64 T 13-10-2018 Thivi_2921 199e4ceb24a2e90a17e827bc4de8209f 213 Pfam PF00092 von Willebrand factor type A domain 8 162 3.8E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2921 199e4ceb24a2e90a17e827bc4de8209f 213 PIRSF PIRSF020634 3 212 1.2E-72 T 13-10-2018 IPR011392 Tellurite resistance, TerY Thivi_2921 199e4ceb24a2e90a17e827bc4de8209f 213 SMART SM00327 5 184 7.3E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2921 199e4ceb24a2e90a17e827bc4de8209f 213 Gene3D G3DSA:3.40.50.410 6 176 2.1E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2921 199e4ceb24a2e90a17e827bc4de8209f 213 SUPERFAMILY SSF53300 5 163 2.07E-19 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 Gene3D G3DSA:4.10.480.10 248 340 1.3E-31 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 SUPERFAMILY SSF56770 61 328 3.14E-86 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PIRSF PIRSF000310 16 389 7.4E-129 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 26 54 1.2E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 235 252 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 209 232 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 58 80 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 81 105 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 127 150 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 271 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 277 303 2.4E-62 T 13-10-2018 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 Gene3D G3DSA:3.40.50.700 51 246 1.9E-67 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 73 228 9.5E-32 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 248 329 6.2E-28 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_3936 1acf8424157890f14a877f5055d80fa8 404 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 18 381 2.3E-132 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 Gene3D G3DSA:3.30.930.10 160 506 5.4E-129 T 13-10-2018 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 1.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 1.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 1.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 1.8E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 Pfam PF01336 OB-fold nucleic acid binding domain 73 151 4.0E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 Gene3D G3DSA:2.40.50.140 20 159 6.7E-41 T 13-10-2018 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 SUPERFAMILY SSF55681 167 507 2.79E-118 T 13-10-2018 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 SUPERFAMILY SSF50249 18 160 2.33E-44 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 26 509 44.442 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 21 509 1.1E-207 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_1311 e498348f9d8903d1a94c2eea7e1989f0 512 Pfam PF00152 tRNA synthetases class II (D, K and N) 168 506 3.3E-79 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3569 be93bfe3205ca18b1b16c7bcd2fd397a 151 Pfam PF04930 FUN14 family 61 149 2.4E-11 T 13-10-2018 IPR007014 FUN14 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 Gene3D G3DSA:1.10.287.950 63 374 3.3E-36 T 13-10-2018 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 312 5.2E-25 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 SUPERFAMILY SSF58104 122 320 5.89E-37 T 13-10-2018 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 SMART SM00283 96 347 7.0E-5 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 221 2.1E-17 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 223 252 2.1E-17 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_1219 9d4167b10f58c1a7788c2a5f8e624406 395 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 2.1E-17 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2353 5d06cf2fb73bafdab58bbb9ba01f05e1 192 Pfam PF08974 Domain of unknown function (DUF1877) 1 190 2.1E-43 T 13-10-2018 IPR015068 Protein of unknown function DUF1877 Thivi_2353 5d06cf2fb73bafdab58bbb9ba01f05e1 192 SUPERFAMILY SSF111069 40 192 2.09E-32 T 13-10-2018 IPR035944 YfbM-like super family Thivi_2353 5d06cf2fb73bafdab58bbb9ba01f05e1 192 Gene3D G3DSA:3.40.1760.10 47 192 7.2E-14 T 13-10-2018 IPR035944 YfbM-like super family Thivi_0811 42bde5f733acc6308e017a98a139eb49 137 SUPERFAMILY SSF141371 4 91 3.14E-6 T 13-10-2018 Thivi_0811 42bde5f733acc6308e017a98a139eb49 137 Pfam PF07238 PilZ domain 3 92 9.4E-11 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Gene3D G3DSA:3.30.450.20 14 148 1.6E-48 T 13-10-2018 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 1.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.3E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 512 1.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SUPERFAMILY SSF47384 273 355 9.61E-22 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Gene3D G3DSA:3.30.565.10 355 514 1.5E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Pfam PF13426 PAS domain 36 131 1.2E-21 T 13-10-2018 IPR000014 PAS domain Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 354 2.9E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 136 1.0E-18 T 13-10-2018 IPR000014 PAS domain Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SMART SM00091 15 84 1.3E-5 T 13-10-2018 IPR000014 PAS domain Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SMART SM00091 144 211 33.0 T 13-10-2018 IPR000014 PAS domain Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SMART SM00388 288 354 2.7E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SMART SM00387 399 513 9.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SUPERFAMILY SSF55785 128 177 4.45E-5 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SMART SM00086 90 132 2.2E-10 T 13-10-2018 IPR001610 PAC motif Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Pfam PF13188 PAS domain 145 186 0.11 T 13-10-2018 IPR000014 PAS domain Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SUPERFAMILY SSF55785 21 130 8.72E-29 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 SUPERFAMILY SSF55874 343 511 1.96E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1217 86b8b795db06c06f45d3568321c77e35 515 Gene3D G3DSA:1.10.287.130 274 354 2.6E-25 T 13-10-2018 Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 Pfam PF00571 CBS domain 95 140 0.0067 T 13-10-2018 IPR000644 CBS domain Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 343 484 1.6E-35 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 Gene3D G3DSA:3.10.580.10 18 152 2.0E-18 T 13-10-2018 Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 SMART SM00116 94 142 2.5 T 13-10-2018 IPR000644 CBS domain Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 SMART SM00116 28 77 0.0083 T 13-10-2018 IPR000644 CBS domain Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 SUPERFAMILY SSF54631 24 142 1.77E-17 T 13-10-2018 Thivi_2106 12d0868afad2c1333c0186acc5016e24 486 Pfam PF03445 Putative nucleotidyltransferase DUF294 170 306 3.2E-45 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Thivi_1974 66572b9d97e66f1757231c47f0711267 220 Gene3D G3DSA:3.90.550.10 1 219 9.1E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1974 66572b9d97e66f1757231c47f0711267 220 Pfam PF00483 Nucleotidyl transferase 2 136 1.9E-19 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_1974 66572b9d97e66f1757231c47f0711267 220 SUPERFAMILY SSF53448 1 217 1.46E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 Pfam PF01867 CRISPR associated protein Cas1 129 238 9.1E-8 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 Gene3D G3DSA:1.20.120.920 94 292 4.1E-86 T 13-10-2018 Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 7 273 2.9E-114 T 13-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 131 238 3.5E-27 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 Gene3D G3DSA:3.100.10.20 1 93 8.2E-38 T 13-10-2018 Thivi_0465 a6dadc1c644e2115e8d3c40cb765d70c 305 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 11 290 16.941 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 Gene3D G3DSA:1.10.3720.10 297 493 4.7E-28 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 SUPERFAMILY SSF161098 301 487 6.93E-32 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 490 2.4E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 284 7.2E-55 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 Gene3D G3DSA:3.40.190.10 31 285 1.4E-70 T 13-10-2018 Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 SUPERFAMILY SSF53850 28 285 1.36E-57 T 13-10-2018 Thivi_0477 987b62fc9a34eaef5d615fcd842d255e 499 Gene3D G3DSA:3.40.190.120 125 227 1.4E-70 T 13-10-2018 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SUPERFAMILY SSF52540 213 345 1.96E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SUPERFAMILY SSF50978 1255 1576 3.85E-51 T 13-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Gene3D G3DSA:2.130.10.10 1129 1311 3.2E-28 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Gene3D G3DSA:2.130.10.10 842 1128 7.0E-31 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Gene3D G3DSA:2.130.10.10 1312 1600 2.5E-48 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Pfam PF00400 WD domain, G-beta repeat 1258 1292 4.6E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Pfam PF00400 WD domain, G-beta repeat 979 1007 0.1 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Pfam PF00400 WD domain, G-beta repeat 1490 1527 1.2E-8 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 Pfam PF12894 Anaphase-promoting complex subunit 4 WD40 domain 1379 1444 2.6E-5 T 13-10-2018 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1254 1293 1.0E-7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1306 1349 5.2 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1403 1442 0.0047 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1069 1105 0.095 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1155 1194 0.018 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1447 1486 0.092 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1012 1054 4.1 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1107 1152 5.6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1488 1527 3.6E-11 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 1536 1575 1.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SMART SM00320 970 1009 4.7E-5 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 Thivi_3421 97d8383d111d518be16bc0f2e70ed512 1615 SUPERFAMILY SSF50978 938 1294 2.75E-50 T 13-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 SMART SM00849 515 701 2.1E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 SUPERFAMILY SSF56281 504 737 2.62E-42 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 104 730 5.1E-100 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 Gene3D G3DSA:3.60.15.10 506 741 9.9E-47 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 Pfam PF13567 Domain of unknown function (DUF4131) 22 172 7.6E-33 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 234 410 2.6E-23 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 Pfam PF00753 Metallo-beta-lactamase superfamily 513 693 1.4E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_0721 e691c05acfd06f84797972d5f996f75a 762 Pfam PF03772 Competence protein 212 478 4.9E-61 T 13-10-2018 IPR004477 ComEC/Rec2-related protein Thivi_3495 2df10da895c252734ee61d35ac1dd08c 216 Pfam PF06250 Protein of unknown function (DUF1016) 52 143 5.3E-22 T 13-10-2018 IPR009362 Protein of unknown function DUF1016 Thivi_0612 ee8701953baedfd1ea038113271f8158 254 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 123.828 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Thivi_0612 ee8701953baedfd1ea038113271f8158 254 SUPERFAMILY SSF63892 11 246 2.48E-97 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Thivi_0612 ee8701953baedfd1ea038113271f8158 254 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 13 246 3.0E-97 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Thivi_0612 ee8701953baedfd1ea038113271f8158 254 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 13 245 3.0E-102 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Thivi_0612 ee8701953baedfd1ea038113271f8158 254 Gene3D G3DSA:3.20.20.70 3 251 1.2E-103 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2625 511ceb922e46015ee5592ba639bd3936 195 Pfam PF07589 PEP-CTERM motif 170 194 2.8E-5 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_2625 511ceb922e46015ee5592ba639bd3936 195 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 171 191 6.1E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_2246 1b6d99e191398f3630f65f725a24849f 253 SUPERFAMILY SSF53335 30 238 2.9E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2246 1b6d99e191398f3630f65f725a24849f 253 Gene3D G3DSA:3.40.50.150 37 249 7.7E-41 T 13-10-2018 Thivi_2246 1b6d99e191398f3630f65f725a24849f 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 235 1.4E-28 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 37.9 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 SUPERFAMILY SSF53800 17 341 5.07E-112 T 13-10-2018 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 Pfam PF00762 Ferrochelatase 18 335 2.1E-114 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 TIGRFAM TIGR00109 hemH: ferrochelatase 17 334 3.7E-99 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 Gene3D G3DSA:3.40.50.1400 18 335 2.2E-98 T 13-10-2018 Thivi_1624 7fa174c2cf21034ae5316b6edc81f6e7 373 Gene3D G3DSA:3.40.50.1400 179 317 2.2E-98 T 13-10-2018 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.5E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 SMART SM00387 347 460 1.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 SUPERFAMILY SSF47384 225 293 6.08E-7 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 SUPERFAMILY SSF55874 310 457 2.36E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 1.5E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 Gene3D G3DSA:1.10.287.130 194 305 4.3E-9 T 13-10-2018 Thivi_4475 2712b36f81040a55f3fae0d6a0bdb1b4 465 Gene3D G3DSA:3.30.565.10 306 463 1.1E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 236 269 1.5E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 168 201 1.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 4 37 4.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 270 303 2.0E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 202 235 1.8E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 304 337 5.3E-6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SMART SM00028 38 71 2.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SUPERFAMILY SSF48452 140 338 1.11E-44 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:1.25.40.10 312 359 7.7E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:1.25.40.10 243 278 3.1E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:1.25.40.10 279 311 6.3E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF13432 Tetratricopeptide repeat 9 69 5.9E-8 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF14559 Tetratricopeptide repeat 178 240 1.6E-9 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:1.25.40.10 138 242 7.0E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:1.25.40.10 6 126 6.6E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:3.40.50.2000 547 723 2.9E-106 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Gene3D G3DSA:3.40.50.11380 381 730 2.9E-106 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF13414 TPR repeat 284 318 1.2E-8 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF13414 TPR repeat 245 282 4.4E-11 T 13-10-2018 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF13844 Glycosyl transferase family 41 391 527 6.8E-25 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 Pfam PF13844 Glycosyl transferase family 41 568 741 5.4E-11 T 13-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 Thivi_0880 0575aa874823c2a1d3d5e325719a27c0 749 SUPERFAMILY SSF48452 7 199 7.59E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 SUPERFAMILY SSF49879 17 97 1.03E-22 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 Pfam PF00563 EAL domain 135 361 4.1E-40 T 13-10-2018 IPR001633 EAL domain Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 SMART SM00240 25 76 4.8E-14 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 SUPERFAMILY SSF141868 135 361 8.11E-43 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 Pfam PF00498 FHA domain 26 91 5.4E-18 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 SMART SM00052 127 363 5.6E-11 T 13-10-2018 IPR001633 EAL domain Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 Gene3D G3DSA:3.20.20.450 129 364 1.9E-46 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1090 b22ef89ca66c7590de0d043eea03b485 365 Gene3D G3DSA:2.60.200.20 4 104 5.5E-23 T 13-10-2018 Thivi_1468 69a49784a2e4cf4b2dc27516def5ccc3 246 Gene3D G3DSA:3.40.50.300 48 211 3.3E-5 T 13-10-2018 Thivi_1468 69a49784a2e4cf4b2dc27516def5ccc3 246 SUPERFAMILY SSF52540 52 210 1.3E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1325 acbd51b184a80fbe288d41702094e35e 336 Pfam PF08496 Peptidase family S49 N-terminal 9 152 3.7E-47 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Thivi_1325 acbd51b184a80fbe288d41702094e35e 336 Pfam PF01343 Peptidase family S49 156 304 1.9E-45 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Thivi_1325 acbd51b184a80fbe288d41702094e35e 336 Gene3D G3DSA:3.40.1750.20 196 262 3.8E-42 T 13-10-2018 Thivi_1325 acbd51b184a80fbe288d41702094e35e 336 SUPERFAMILY SSF52096 94 293 1.87E-28 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_1325 acbd51b184a80fbe288d41702094e35e 336 Gene3D G3DSA:3.90.226.10 99 295 3.8E-42 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 636 34.93 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 633 1.2E-221 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 221 2.0E-14 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Gene3D G3DSA:3.30.54.20 131 188 1.2E-64 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 SUPERFAMILY SSF55186 66 243 7.85E-67 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Gene3D G3DSA:3.40.50.800 534 639 3.7E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Pfam PF03129 Anticodon binding domain 543 632 3.5E-22 T 13-10-2018 IPR004154 Anticodon-binding Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Gene3D G3DSA:3.10.20.30 3 62 9.0E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Gene3D G3DSA:3.30.930.10 225 533 5.6E-123 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 SUPERFAMILY SSF52954 531 636 1.18E-32 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Gene3D G3DSA:3.30.980.10 70 224 1.2E-64 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 SUPERFAMILY SSF81271 3 61 1.08E-14 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 531 1.5E-41 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 3.7E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 3.7E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 3.7E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 3.7E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 3.7E-53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 SUPERFAMILY SSF55681 245 528 2.3E-92 T 13-10-2018 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 SMART SM00863 171 221 1.2E-24 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Thivi_1565 3ac73b3adcb3ad3eca9c8edf1205c7eb 639 Pfam PF02824 TGS domain 4 61 5.4E-8 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Thivi_2621 4af59312a8e1cc26c102008ac9325fb9 185 Gene3D G3DSA:2.60.40.1820 50 178 4.2E-11 T 13-10-2018 Thivi_2621 4af59312a8e1cc26c102008ac9325fb9 185 SUPERFAMILY SSF117070 33 173 7.32E-20 T 13-10-2018 Thivi_2621 4af59312a8e1cc26c102008ac9325fb9 185 SMART SM00769 56 171 1.9E-5 T 13-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 Thivi_2621 4af59312a8e1cc26c102008ac9325fb9 185 Pfam PF03168 Late embryogenesis abundant protein 76 164 1.6E-14 T 13-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 PIRSF PIRSF000876 1 360 2.4E-111 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 Pfam PF01339 CheB methylesterase 174 354 6.1E-48 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 SUPERFAMILY SSF52172 3 107 8.4E-27 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 SUPERFAMILY SSF52738 172 357 4.71E-51 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 SMART SM00448 2 115 5.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 359 34.525 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 Pfam PF00072 Response regulator receiver domain 5 107 5.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 Gene3D G3DSA:3.40.50.2300 1 136 6.2E-30 T 13-10-2018 Thivi_0323 0e2727681159a38a2deed057a3dd271c 360 Gene3D G3DSA:3.40.50.180 168 356 9.1E-52 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_1026 f0928daf72b387d55803d4872d16b524 148 Pfam PF00293 NUDIX domain 8 141 1.9E-20 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 Gene3D G3DSA:3.90.79.10 3 146 9.9E-35 T 13-10-2018 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 SUPERFAMILY SSF55811 3 144 2.17E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 100 121 1.2E-8 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 127 140 1.2E-8 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 PRINTS PR01404 DATP pyrophosphohydrolase signature 22 43 1.2E-8 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 PRINTS PR00502 NUDIX hydrolase family signature 49 64 3.5E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 PRINTS PR00502 NUDIX hydrolase family signature 35 49 3.5E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_1026 f0928daf72b387d55803d4872d16b524 148 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Thivi_1288 9db3f4736f57d4a880c2a1529a9240c4 118 Gene3D G3DSA:3.30.70.100 14 74 1.5E-7 T 13-10-2018 Thivi_1288 9db3f4736f57d4a880c2a1529a9240c4 118 SUPERFAMILY SSF55008 23 77 2.1E-7 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_4514 d298cc6092fa00bc09f9d06036fb586b 342 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 318 23.024 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_4514 d298cc6092fa00bc09f9d06036fb586b 342 Gene3D G3DSA:1.20.120.920 81 327 2.2E-68 T 13-10-2018 Thivi_4514 d298cc6092fa00bc09f9d06036fb586b 342 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 3 325 2.1E-87 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_4514 d298cc6092fa00bc09f9d06036fb586b 342 Gene3D G3DSA:3.100.10.20 1 77 3.5E-22 T 13-10-2018 Thivi_4514 d298cc6092fa00bc09f9d06036fb586b 342 Pfam PF01867 CRISPR associated protein Cas1 3 288 3.0E-78 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.5E-54 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Pfam PF03144 Elongation factor Tu domain 2 219 289 1.2E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 SUPERFAMILY SSF50447 151 299 1.41E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.1E-281 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Gene3D G3DSA:2.40.30.10 199 299 3.8E-30 T 13-10-2018 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Gene3D G3DSA:3.30.70.870 306 590 6.8E-127 T 13-10-2018 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Pfam PF00679 Elongation factor G C-terminus 396 476 1.6E-21 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Gene3D G3DSA:2.40.50.250 483 599 6.8E-127 T 13-10-2018 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Gene3D G3DSA:3.40.50.300 1 198 5.3E-65 T 13-10-2018 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 SUPERFAMILY SSF52540 3 207 5.27E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 SUPERFAMILY SSF54980 302 387 8.99E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 6.6E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 Gene3D G3DSA:3.30.70.240 389 482 6.8E-127 T 13-10-2018 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_2070 9c299e206f68388ef28eb15c191e52c6 604 SUPERFAMILY SSF54980 398 513 9.11E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like Thivi_4629 e2efe192cc40ab028296d860f878ad54 465 Gene3D G3DSA:2.40.440.10 47 291 1.5E-29 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4629 e2efe192cc40ab028296d860f878ad54 465 SUPERFAMILY SSF141523 86 224 1.83E-24 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_4629 e2efe192cc40ab028296d860f878ad54 465 Pfam PF03734 L,D-transpeptidase catalytic domain 87 224 7.7E-18 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_0128 bcb59cbec2cf3871cc7c181e97aa83a2 418 Pfam PF13439 Glycosyltransferase Family 4 14 214 2.1E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_0128 bcb59cbec2cf3871cc7c181e97aa83a2 418 Gene3D G3DSA:3.40.50.2000 1 229 2.2E-15 T 13-10-2018 Thivi_0128 bcb59cbec2cf3871cc7c181e97aa83a2 418 SUPERFAMILY SSF53756 12 410 5.58E-57 T 13-10-2018 Thivi_0128 bcb59cbec2cf3871cc7c181e97aa83a2 418 Pfam PF13692 Glycosyl transferases group 1 239 368 2.6E-17 T 13-10-2018 Thivi_0128 bcb59cbec2cf3871cc7c181e97aa83a2 418 Gene3D G3DSA:3.40.50.2000 235 390 2.7E-27 T 13-10-2018 Thivi_2247 7bdbd97014e25c6d99c7d845b14a1464 95 Gene3D G3DSA:1.10.1200.10 12 93 1.6E-15 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_2247 7bdbd97014e25c6d99c7d845b14a1464 95 SUPERFAMILY SSF47336 22 92 1.09E-10 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_2247 7bdbd97014e25c6d99c7d845b14a1464 95 Pfam PF00550 Phosphopantetheine attachment site 28 88 5.8E-9 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Thivi_3681 fd61fa47fd5db6d4a6311642fef4985c 307 Gene3D G3DSA:2.160.20.10 27 304 2.7E-16 T 13-10-2018 IPR012334 Pectin lyase fold Thivi_3681 fd61fa47fd5db6d4a6311642fef4985c 307 SUPERFAMILY SSF51126 30 279 1.45E-27 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 SUPERFAMILY SSF56235 43 811 1.29E-185 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 Gene3D G3DSA:1.10.439.10 19 181 3.3E-52 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 Gene3D G3DSA:3.60.20.10 262 790 5.9E-145 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 PIRSF PIRSF001227 5 800 6.0E-161 T 13-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 Pfam PF01804 Penicillin amidase 47 798 9.0E-186 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 Gene3D G3DSA:2.30.120.10 334 414 5.9E-145 T 13-10-2018 Thivi_3473 daf890b57c22abe92cbd115389947c4c 815 Gene3D G3DSA:1.10.1400.10 563 700 5.9E-145 T 13-10-2018 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 SUPERFAMILY SSF51735 229 388 1.43E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 SMART SM00997 229 388 1.7E-108 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 460 49.084 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 SMART SM00996 6 467 0.0 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 229 388 2.0E-81 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 251 268 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 SUPERFAMILY SSF52283 4 468 2.27E-119 T 13-10-2018 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 Gene3D G3DSA:3.40.50.720 231 388 4.1E-242 T 13-10-2018 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 467 3.5E-150 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 Gene3D G3DSA:3.40.50.1480 7 468 4.1E-242 T 13-10-2018 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 PIRSF PIRSF001109 1 468 1.5E-194 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_3579 e8587544d54fe284454c0ced392bda8c 468 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 460 2.3E-189 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Thivi_1858 465e4a965695f862476dbbad655c1f1e 146 Pfam PF03330 Lytic transglycolase 28 116 2.7E-25 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_1858 465e4a965695f862476dbbad655c1f1e 146 Gene3D G3DSA:2.40.40.10 27 121 1.9E-37 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_1858 465e4a965695f862476dbbad655c1f1e 146 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 30 129 1.3E-41 T 13-10-2018 IPR012997 Rare lipoprotein A Thivi_1858 465e4a965695f862476dbbad655c1f1e 146 SUPERFAMILY SSF50685 22 120 2.83E-13 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_1858 465e4a965695f862476dbbad655c1f1e 146 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 9 120 21.766 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Thivi_0386 a3fd88b8c3eb5edf5e19c75bd5ba6c72 105 Gene3D G3DSA:3.40.1690.10 10 88 3.0E-20 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_0386 a3fd88b8c3eb5edf5e19c75bd5ba6c72 105 SUPERFAMILY SSF160544 11 87 5.36E-20 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_0386 a3fd88b8c3eb5edf5e19c75bd5ba6c72 105 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 83 9.2E-16 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 SUPERFAMILY SSF53383 12 392 3.75E-125 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 Pfam PF00202 Aminotransferase class-III 18 391 3.2E-116 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 392 5.1E-145 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 Gene3D G3DSA:3.90.1150.10 20 385 9.1E-141 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 PIRSF PIRSF000521 168 395 1.1E-39 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 PIRSF PIRSF000521 6 155 4.4E-12 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 395 69.687 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 219 256 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_1869 9cfa6c51730d27228c284798da11ab12 399 Gene3D G3DSA:3.40.640.10 55 301 9.1E-141 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 Gene3D G3DSA:3.30.63.10 35 94 1.8E-65 T 13-10-2018 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 SMART SM00072 3 185 2.5E-66 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 Gene3D G3DSA:3.40.50.300 8 180 1.8E-65 T 13-10-2018 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 182 3.0E-70 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 SUPERFAMILY SSF52540 3 187 4.81E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 Hamap MF_00328 Guanylate kinase [gmk]. 2 185 36.043 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Thivi_3324 78a40659e98708027e663a4be61f0c1b 203 Pfam PF00625 Guanylate kinase 7 181 6.0E-48 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Thivi_3192 07de205ea988d83db13691781c03254a 438 Pfam PF02386 Cation transport protein 313 432 4.8E-17 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Thivi_3192 07de205ea988d83db13691781c03254a 438 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.4E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_3192 07de205ea988d83db13691781c03254a 438 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.4E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_3192 07de205ea988d83db13691781c03254a 438 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.4E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_3192 07de205ea988d83db13691781c03254a 438 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.4E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_3192 07de205ea988d83db13691781c03254a 438 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.4E-29 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_3192 07de205ea988d83db13691781c03254a 438 SUPERFAMILY SSF51735 1 150 1.92E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3192 07de205ea988d83db13691781c03254a 438 SUPERFAMILY SSF51735 232 323 1.01E-22 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3192 07de205ea988d83db13691781c03254a 438 Gene3D G3DSA:3.40.50.720 2 138 2.0E-45 T 13-10-2018 Thivi_3192 07de205ea988d83db13691781c03254a 438 Pfam PF02080 TrkA-C domain 155 221 2.0E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_3192 07de205ea988d83db13691781c03254a 438 Pfam PF02254 TrkA-N domain 235 323 7.2E-19 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_3192 07de205ea988d83db13691781c03254a 438 Pfam PF02254 TrkA-N domain 3 113 2.9E-28 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_3192 07de205ea988d83db13691781c03254a 438 Gene3D G3DSA:3.30.70.1450 139 231 5.5E-21 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3192 07de205ea988d83db13691781c03254a 438 SUPERFAMILY SSF116726 146 224 1.31E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3192 07de205ea988d83db13691781c03254a 438 Gene3D G3DSA:3.40.50.720 232 339 8.3E-26 T 13-10-2018 Thivi_2460 cc51c482dc367972c71f222d08595944 616 Gene3D G3DSA:3.60.15.10 17 245 7.1E-49 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2460 cc51c482dc367972c71f222d08595944 616 SMART SM00267 432 605 8.7E-53 T 13-10-2018 IPR000160 GGDEF domain Thivi_2460 cc51c482dc367972c71f222d08595944 616 Pfam PF00990 Diguanylate cyclase, GGDEF domain 444 601 3.3E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_2460 cc51c482dc367972c71f222d08595944 616 Gene3D G3DSA:3.30.70.270 429 606 1.0E-51 T 13-10-2018 Thivi_2460 cc51c482dc367972c71f222d08595944 616 SMART SM00849 39 227 2.8E-11 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_2460 cc51c482dc367972c71f222d08595944 616 SUPERFAMILY SSF56281 20 258 2.98E-26 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2460 cc51c482dc367972c71f222d08595944 616 SUPERFAMILY SSF55073 448 603 1.49E-42 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2460 cc51c482dc367972c71f222d08595944 616 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 604 6.3E-48 T 13-10-2018 IPR000160 GGDEF domain Thivi_1697 8985129019a64c5f375099045eee4552 466 SUPERFAMILY SSF52540 20 205 1.38E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1697 8985129019a64c5f375099045eee4552 466 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 23 199 4.1E-11 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_1697 8985129019a64c5f375099045eee4552 466 Gene3D G3DSA:3.40.50.300 20 200 3.0E-15 T 13-10-2018 Thivi_1697 8985129019a64c5f375099045eee4552 466 Gene3D G3DSA:3.40.50.880 259 418 4.0E-9 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1697 8985129019a64c5f375099045eee4552 466 SUPERFAMILY SSF52317 250 439 2.04E-29 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1697 8985129019a64c5f375099045eee4552 466 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 431 6.0E-29 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Thivi_3997 885ac3bc23719d0abdc361e7d6a4f49a 583 PIRSF PIRSF000719 1 577 7.3E-233 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Thivi_3997 885ac3bc23719d0abdc361e7d6a4f49a 583 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 571 3.0E-167 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Thivi_3997 885ac3bc23719d0abdc361e7d6a4f49a 583 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 572 44.652 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Thivi_3997 885ac3bc23719d0abdc361e7d6a4f49a 583 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 568 1.8E-257 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 161 379 1.8E-34 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 Gene3D G3DSA:3.30.70.20 233 311 2.1E-110 T 13-10-2018 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 11 414 7.6E-199 T 13-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 89 152 6.5E-8 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 Gene3D G3DSA:3.30.70.2500 60 158 6.5E-40 T 13-10-2018 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 Gene3D G3DSA:3.30.413.10 159 397 2.1E-110 T 13-10-2018 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 SUPERFAMILY SSF54862 222 302 1.43E-16 T 13-10-2018 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 SUPERFAMILY SSF55124 7 161 9.45E-60 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Thivi_0544 2288ac2b8235c9e56bf4ee695637ab2a 417 SUPERFAMILY SSF56014 162 400 1.39E-49 T 13-10-2018 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Gene3D G3DSA:1.25.40.10 11 178 4.8E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SUPERFAMILY SSF52540 319 546 1.4E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0797 56555970400b29599af4cb9b47e21004 590 Pfam PF13469 Sulfotransferase family 321 511 2.7E-42 T 13-10-2018 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Pfam PF13181 Tetratricopeptide repeat 83 109 0.21 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Pfam PF13432 Tetratricopeptide repeat 14 77 8.1E-7 T 13-10-2018 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Pfam PF13432 Tetratricopeptide repeat 116 174 7.2E-6 T 13-10-2018 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Gene3D G3DSA:3.40.50.300 310 581 1.0E-64 T 13-10-2018 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SUPERFAMILY SSF48452 15 279 1.82E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 111 144 72.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 43 76 58.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 253 286 71.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 77 110 0.072 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 146 179 2.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 SMART SM00028 181 215 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0797 56555970400b29599af4cb9b47e21004 590 Gene3D G3DSA:1.25.40.10 186 288 1.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0319 6ac09e8267c6f1d24cbba5295e4b7bc2 198 SUPERFAMILY SSF64438 11 169 6.96E-47 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_0319 6ac09e8267c6f1d24cbba5295e4b7bc2 198 Pfam PF03975 CheD chemotactic sensory transduction 66 165 7.4E-27 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_0319 6ac09e8267c6f1d24cbba5295e4b7bc2 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 169 28.637 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_0319 6ac09e8267c6f1d24cbba5295e4b7bc2 198 Gene3D G3DSA:3.30.1330.200 9 177 3.5E-48 T 13-10-2018 IPR038592 CheD-like superfamily Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 Gene3D G3DSA:1.10.760.10 118 214 1.3E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 SUPERFAMILY SSF46626 121 212 1.23E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 SUPERFAMILY SSF46626 30 113 3.3E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 Pfam PF00034 Cytochrome c 47 113 3.4E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 Pfam PF00034 Cytochrome c 135 214 1.0E-7 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 PIRSF PIRSF000005 1 215 5.8E-65 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_2978 72f0dd2a966c7826727faedffdbcfefd 215 Gene3D G3DSA:1.10.760.10 40 115 1.2E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 ProSitePatterns PS00447 DNA polymerase family A signature. 733 752 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Pfam PF01612 3'-5' exonuclease 310 495 2.3E-42 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SMART SM00279 171 206 3.9E-13 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:3.40.50.1010 7 274 8.5E-94 T 13-10-2018 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SUPERFAMILY SSF53098 307 495 8.73E-59 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:1.10.150.20 688 831 2.2E-113 T 13-10-2018 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SUPERFAMILY SSF47807 169 284 4.93E-33 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:1.10.150.20 172 244 8.5E-94 T 13-10-2018 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 702 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 840 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 634 656 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 770 781 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 758 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 867 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 722 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 672 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 1.1E-77 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:1.20.1060.10 521 637 3.2E-39 T 13-10-2018 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:3.30.420.10 305 520 5.5E-73 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 262 1.2E-28 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Gene3D G3DSA:3.30.70.370 643 903 2.2E-113 T 13-10-2018 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SMART SM00474 308 495 9.9E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 168 8.1E-54 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SMART SM00475 4 259 1.9E-128 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SMART SM00482 665 871 7.1E-119 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 TIGRFAM TIGR00593 pola: DNA polymerase I 7 907 2.9E-282 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SUPERFAMILY SSF88723 6 168 1.47E-56 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SMART SM00479 328 496 0.0025 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_0273 79d7181d3eebcd7355d171913acead20 907 Pfam PF00476 DNA polymerase family A 530 905 4.6E-153 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0273 79d7181d3eebcd7355d171913acead20 907 SUPERFAMILY SSF56672 500 907 1.45E-157 T 13-10-2018 Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 41 452 1.8E-188 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 27 454 5.9E-167 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 SUPERFAMILY SSF52540 111 381 2.28E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 Gene3D G3DSA:3.40.50.12240 34 456 5.9E-152 T 13-10-2018 Thivi_0361 407d0e60f7a8c529553d4771dabdd3a4 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 164 375 7.1E-69 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00091 25 91 2.1 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00091 151 220 2.2E-7 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1031 1196 8.7E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.40.50.2300 896 1032 6.3E-33 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF52172 540 662 2.13E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00267 1023 1196 1.5E-63 T 13-10-2018 IPR000160 GGDEF domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00387 400 516 1.2E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF55073 1039 1198 5.1E-49 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00388 288 353 2.1E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 281 5.9E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 145 1.4E-8 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF52172 897 1030 3.27E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.30.70.270 1033 1204 2.2E-56 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:1.10.287.130 273 351 3.5E-25 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF00512 His Kinase A (phospho-acceptor) domain 289 353 1.4E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00448 542 657 3.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SMART SM00448 897 1010 1.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.30.565.10 352 519 2.4E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.30.450.20 138 272 4.2E-13 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.30.450.20 11 137 8.9E-14 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF13188 PAS domain 27 89 0.003 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF13188 PAS domain 152 211 2.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF47384 273 354 3.14E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1034 1192 3.0E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF47226 640 784 4.06E-12 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 3.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 3.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 3.3E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF01627 Hpt domain 717 794 2.2E-6 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF55785 136 273 3.05E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF55874 342 518 1.7E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:1.20.120.160 689 803 6.8E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 SUPERFAMILY SSF55785 14 137 1.29E-12 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Gene3D G3DSA:3.40.50.2300 537 667 2.6E-34 T 13-10-2018 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF00072 Response regulator receiver domain 899 1009 1.6E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF00072 Response regulator receiver domain 545 657 1.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0706 6f8ff30a4b9c3a55d76c4dd8e84b992f 1207 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 514 2.5E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 123 236 3.6E-25 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 12 95 6.6E-5 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 241 352 5.5E-16 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 SUPERFAMILY SSF55620 239 354 2.06E-19 T 13-10-2018 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 SUPERFAMILY SSF55620 122 236 7.78E-29 T 13-10-2018 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 SUPERFAMILY SSF55620 11 95 5.56E-9 T 13-10-2018 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Gene3D G3DSA:3.30.479.10 237 353 1.8E-22 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Gene3D G3DSA:3.30.479.10 8 118 2.2E-13 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Thivi_0093 b8cc944dc0dcbd994d21e74ffb337b6c 364 Gene3D G3DSA:3.30.479.10 120 236 4.1E-34 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 PIRSF PIRSF006630 2 536 2.1E-197 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 Gene3D G3DSA:3.60.110.10 1 262 3.9E-96 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 Pfam PF00795 Carbon-nitrogen hydrolase 7 241 2.3E-30 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 Pfam PF02540 NAD synthase 265 512 2.1E-75 T 13-10-2018 IPR022310 NAD/GMP synthase Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 3 536 30.654 T 13-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 Gene3D G3DSA:3.40.50.620 263 536 8.3E-117 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 SUPERFAMILY SSF56317 4 241 1.83E-66 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 35 50 - T 13-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 TIGRFAM TIGR00552 nadE: NAD+ synthetase 272 515 1.7E-62 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Thivi_3360 6fa8e947d82817e4b829aef197daf2e3 536 SUPERFAMILY SSF52402 260 521 1.33E-79 T 13-10-2018 Thivi_1970 50de8b5375ff2ad81e81bc3bd8b5f1fa 182 Pfam PF08269 Cache domain 60 141 2.7E-15 T 13-10-2018 IPR004010 Double Cache domain 2 Thivi_1970 50de8b5375ff2ad81e81bc3bd8b5f1fa 182 Gene3D G3DSA:3.30.450.20 25 164 2.1E-24 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF00989 PAS fold 21 116 1.9E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.20.20.450 857 1107 1.4E-75 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF00563 EAL domain 874 1095 7.5E-61 T 13-10-2018 IPR001633 EAL domain Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SMART SM00065 295 468 0.0053 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF141868 871 1103 5.1E-67 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.30.450.20 165 399 8.6E-115 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 682 840 4.5E-42 T 13-10-2018 IPR000160 GGDEF domain Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.30.70.270 678 846 8.5E-54 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF55781 285 459 5.61E-41 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF55785 19 111 4.97E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF55073 690 845 5.02E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.30.450.20 5 123 9.1E-38 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF00990 Diguanylate cyclase, GGDEF domain 685 839 1.7E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.30.450.270 467 646 8.6E-115 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SMART SM00267 674 844 9.7E-63 T 13-10-2018 IPR000160 GGDEF domain Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF08446 PAS fold 161 268 4.3E-16 T 13-10-2018 IPR013654 PAS fold-2 GO:0006355 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF55781 480 654 1.01E-26 T 13-10-2018 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SUPERFAMILY SSF55785 150 269 1.83E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 SMART SM00052 859 1100 4.7E-69 T 13-10-2018 IPR001633 EAL domain Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF00360 Phytochrome region 487 654 2.5E-19 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Pfam PF01590 GAF domain 298 441 2.1E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4233 14be09bc2e63996170bc04cbde9f9acf 1122 Gene3D G3DSA:3.30.450.40 160 629 8.6E-115 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 Gene3D G3DSA:3.40.50.300 2 280 7.2E-60 T 13-10-2018 Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 SUPERFAMILY SSF52540 6 237 5.01E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 Pfam PF00005 ABC transporter 18 184 3.6E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 Gene3D G3DSA:3.40.50.300 281 530 6.3E-55 T 13-10-2018 Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 SMART SM00382 26 238 7.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 SMART SM00382 344 512 5.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 SUPERFAMILY SSF52540 299 525 9.63E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 Pfam PF12848 ABC transporter 224 309 1.6E-21 T 13-10-2018 IPR032781 ABC-transporter extension domain Thivi_1724 cc78b5f2a1541c41a0fc42f537742d33 531 Pfam PF00005 ABC transporter 337 467 2.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 SUPERFAMILY SSF53659 429 752 6.99E-86 T 13-10-2018 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Gene3D G3DSA:3.40.50.720 161 444 3.2E-78 T 13-10-2018 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 PIRSF PIRSF036684 1 753 0.0 T 13-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Pfam PF03949 Malic enzyme, NAD binding domain 165 356 7.7E-17 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 SMART SM01274 18 151 1.3E-77 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 SUPERFAMILY SSF51735 163 452 4.08E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 SUPERFAMILY SSF53223 10 161 1.08E-50 T 13-10-2018 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Gene3D G3DSA:3.40.50.10950 445 749 9.9E-85 T 13-10-2018 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Gene3D G3DSA:3.40.50.10750 572 725 9.9E-85 T 13-10-2018 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 SMART SM00919 163 400 1.5E-130 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Gene3D G3DSA:3.40.50.10380 1 160 4.7E-67 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 749 1.0E-85 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_2539 2d997c3380faa6a07cfb3e51eeb5083e 753 Pfam PF00390 Malic enzyme, N-terminal domain 19 150 7.4E-26 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 25 425 1.8E-166 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Pfam PF03063 Prismane/CO dehydrogenase family 80 414 2.4E-109 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 SUPERFAMILY SSF56821 1 425 2.22E-145 T 13-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Gene3D G3DSA:3.40.50.2030 120 256 2.3E-53 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Gene3D G3DSA:3.40.50.2030 257 427 1.1E-56 T 13-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Gene3D G3DSA:1.20.1270.20 1 119 6.9E-35 T 13-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 428 17.033 T 13-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_3818 57077a5ec0da712c3508a5b0d24ba9d9 429 Pfam PF03063 Prismane/CO dehydrogenase family 1 83 3.7E-17 T 13-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Thivi_1496 33e7e6eca533085671e1a032c81976f2 258 Pfam PF00905 Penicillin binding protein transpeptidase domain 55 251 2.5E-30 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_1496 33e7e6eca533085671e1a032c81976f2 258 Gene3D G3DSA:3.40.710.10 18 258 2.0E-82 T 13-10-2018 Thivi_1496 33e7e6eca533085671e1a032c81976f2 258 SUPERFAMILY SSF56601 25 251 1.88E-34 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 PIRSF PIRSF000412 1 417 3.2E-162 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 Pfam PF00464 Serine hydroxymethyltransferase 8 386 2.0E-178 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 SUPERFAMILY SSF53383 7 416 1.11E-180 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 Gene3D G3DSA:3.90.1150.10 10 392 2.0E-181 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.785 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 Gene3D G3DSA:3.40.640.10 37 289 2.0E-181 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_1030 66ba048247d18fc8ae52c0305c4cc81c 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Gene3D G3DSA:1.25.40.10 382 530 8.4E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SUPERFAMILY SSF52172 11 136 7.4E-24 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Pfam PF14559 Tetratricopeptide repeat 209 272 3.7E-6 T 13-10-2018 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SMART SM00448 8 124 1.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Gene3D G3DSA:3.40.50.2300 6 126 1.5E-21 T 13-10-2018 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SMART SM00028 445 478 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SMART SM00028 266 299 33.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SMART SM00028 198 231 1.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SMART SM00028 232 265 200.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Gene3D G3DSA:1.25.40.10 266 381 1.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Pfam PF00072 Response regulator receiver domain 11 124 4.6E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 SUPERFAMILY SSF48452 197 479 8.19E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1116 f2f8dde0badd775807a266519ccc0f78 537 Gene3D G3DSA:1.25.40.10 127 265 1.7E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 Gene3D G3DSA:3.20.20.60 4 267 4.6E-105 T 13-10-2018 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 Pfam PF02548 Ketopantoate hydroxymethyltransferase 7 261 3.7E-109 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 11 262 1.2E-102 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 SUPERFAMILY SSF51621 6 262 3.14E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 PIRSF PIRSF000388 2 267 1.9E-99 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Thivi_0098 2f8837904af4146a3f538256cc41d965 267 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 6 267 42.458 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 Gene3D G3DSA:1.10.230.10 234 332 1.3E-114 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 ProSitePatterns PS00480 Citrate synthase signature. 268 280 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PRINTS PR00143 Citrate synthase signature 318 334 8.0E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PRINTS PR00143 Citrate synthase signature 186 201 8.0E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PRINTS PR00143 Citrate synthase signature 208 236 8.0E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PRINTS PR00143 Citrate synthase signature 338 352 8.0E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PRINTS PR00143 Citrate synthase signature 261 281 8.0E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 17 385 1.7E-147 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 Gene3D G3DSA:1.10.580.10 38 365 1.3E-114 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 PIRSF PIRSF001369 11 385 1.2E-102 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 Pfam PF00285 Citrate synthase, C-terminal domain 18 367 1.9E-106 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_3241 cba1bdc9ba9cc0878b4bcce81e40ffd3 385 SUPERFAMILY SSF48256 18 385 1.31E-115 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 Gene3D G3DSA:3.40.50.280 35 147 9.5E-9 T 13-10-2018 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 SUPERFAMILY SSF102114 176 392 1.57E-36 T 13-10-2018 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 SMART SM00729 195 399 1.9E-28 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 Pfam PF04055 Radical SAM superfamily 201 362 3.0E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 Gene3D G3DSA:3.80.30.20 195 401 1.4E-21 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 Pfam PF02310 B12 binding domain 11 132 3.4E-24 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_2401 375ce25a10f53904bc5e38cfc717fa8e 557 TIGRFAM TIGR02026 BchE: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2 497 3.8E-240 T 13-10-2018 Thivi_3846 882ac7b1653ab058378cc8b9f5ed9693 207 SUPERFAMILY SSF56300 4 170 7.32E-30 T 13-10-2018 Thivi_3846 882ac7b1653ab058378cc8b9f5ed9693 207 Gene3D G3DSA:3.60.21.10 1 178 5.4E-26 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_3846 882ac7b1653ab058378cc8b9f5ed9693 207 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 5 156 1.0E-16 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Thivi_3846 882ac7b1653ab058378cc8b9f5ed9693 207 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 5 156 6.1E-25 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 76 92 1.4E-11 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 97 110 1.4E-11 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 41 57 1.4E-11 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 112 16.466 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 37 112 2.5E-19 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_0357 4eaecf6af62ba3ed5b9030f49d9fa813 112 Pfam PF02049 Flagellar hook-basal body complex protein FliE 32 112 1.9E-26 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Thivi_2132 0bd5d61cf1729483c972ab8e951e0bf6 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 107 5.4E-12 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_2132 0bd5d61cf1729483c972ab8e951e0bf6 116 SUPERFAMILY SSF54292 13 115 7.87E-13 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_2132 0bd5d61cf1729483c972ab8e951e0bf6 116 Gene3D G3DSA:3.10.20.30 1 116 1.5E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2132 0bd5d61cf1729483c972ab8e951e0bf6 116 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Thivi_2404 aea09eb248d6824cf93d50dfc82b9dcc 221 Pfam PF03703 Bacterial PH domain 95 184 3.8E-15 T 13-10-2018 IPR005182 Domain of unknown function DUF304 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 Pfam PF02541 Ppx/GppA phosphatase family 30 314 6.6E-72 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 Gene3D G3DSA:1.10.3210.10 315 505 1.0E-63 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 SUPERFAMILY SSF109604 318 499 2.06E-50 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 SUPERFAMILY SSF53067 17 137 2.96E-33 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 311 1.1E-93 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 Gene3D G3DSA:3.30.420.150 121 300 8.3E-85 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 SUPERFAMILY SSF53067 142 316 1.79E-44 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 Gene3D G3DSA:3.30.420.40 18 308 8.3E-85 T 13-10-2018 Thivi_3574 36b16fabd82c27347ae684ba14e89bea 506 PIRSF PIRSF001267 7 506 6.0E-185 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Thivi_0275 2e220f84a254a4a907df179591803f58 77 Gene3D G3DSA:4.10.220.20 7 62 3.1E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0275 2e220f84a254a4a907df179591803f58 77 SUPERFAMILY SSF56918 10 52 1.62E-7 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0275 2e220f84a254a4a907df179591803f58 77 Pfam PF00556 Antenna complex alpha/beta subunit 12 45 2.1E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SUPERFAMILY SSF52242 745 893 8.37E-45 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SUPERFAMILY SSF82282 7 397 2.09E-119 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:3.20.20.20 338 640 2.0E-134 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 TIGRFAM TIGR02082 metH: methionine synthase 13 1216 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Pfam PF02574 Homocysteine S-methyltransferase 17 322 1.3E-78 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 960 1234 2.6E-119 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SUPERFAMILY SSF47644 649 736 7.59E-26 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:3.10.196.10 954 1249 8.1E-129 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SUPERFAMILY SSF51717 354 628 5.76E-92 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:3.20.20.330 2 336 1.0E-126 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:3.40.50.280 745 896 1.3E-52 T 13-10-2018 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Pfam PF02607 B12 binding domain 656 729 2.0E-22 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SUPERFAMILY SSF56507 903 1251 1.01E-119 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Pfam PF02310 B12 binding domain 749 839 4.3E-20 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 PIRSF PIRSF000381 1 1221 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 SMART SM01018 654 737 3.6E-41 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:1.10.288.10 958 1118 8.1E-129 T 13-10-2018 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Gene3D G3DSA:1.10.1240.10 646 734 9.1E-37 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_1704 bfb9e55a262499bb6c3f635c5bdb0a75 1252 Pfam PF00809 Pterin binding enzyme 358 596 2.6E-60 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_3195 c99754df701e466668e15f2dfee0c6ca 195 Pfam PF14334 Domain of unknown function (DUF4390) 35 191 1.6E-45 T 13-10-2018 IPR025500 Protein of unknown function DUF4390 Thivi_0909 5ed1d58c7b6e33abaf868245408578c9 290 Pfam PF12784 PD-(D/E)XK nuclease family transposase 12 239 1.1E-38 T 13-10-2018 Thivi_0909 5ed1d58c7b6e33abaf868245408578c9 290 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 13 283 3.8E-38 T 13-10-2018 IPR010106 Recombination-promoting nuclease RpnA Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 PIRSF PIRSF004669 1 89 1.8E-32 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 Pfam PF01313 Bacterial export proteins, family 3 5 77 3.4E-28 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 9.4E-29 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 9.4E-22 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 9.4E-22 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Thivi_0369 70da13bcd56d4c7a79c3894b06c87dbb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 9.4E-22 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Thivi_3142 ae9f12e8c2d95c5685fd88bcce064c60 160 Pfam PF02082 Transcriptional regulator 2 83 2.1E-28 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Thivi_3142 ae9f12e8c2d95c5685fd88bcce064c60 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 130 8.6E-45 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Thivi_3142 ae9f12e8c2d95c5685fd88bcce064c60 160 Gene3D G3DSA:1.10.10.10 1 139 1.4E-51 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3142 ae9f12e8c2d95c5685fd88bcce064c60 160 SUPERFAMILY SSF46785 2 133 3.13E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3142 ae9f12e8c2d95c5685fd88bcce064c60 160 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 2 134 1.0E-62 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Thivi_1813 3a04dc741d54cf64fdd183ac08b35e58 269 Pfam PF07589 PEP-CTERM motif 244 266 2.7E-8 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_1813 3a04dc741d54cf64fdd183ac08b35e58 269 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 244 267 2.8E-7 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 Pfam PF03466 LysR substrate binding domain 87 290 8.1E-53 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 SUPERFAMILY SSF53850 88 293 1.55E-47 T 13-10-2018 Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 Gene3D G3DSA:1.10.10.10 2 66 1.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 2.2E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 2.2E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 2.2E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 SUPERFAMILY SSF46785 1 83 2.45E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 Gene3D G3DSA:3.40.190.290 88 296 8.7E-46 T 13-10-2018 Thivi_1569 e0fec174e145df0c1b08fc0a4b6e19ab 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 60 1.2E-23 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Gene3D G3DSA:3.30.565.10 313 435 5.0E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Gene3D G3DSA:1.10.287.130 176 287 1.3E-22 T 13-10-2018 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SMART SM00388 231 292 1.5E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SUPERFAMILY SSF52833 470 623 5.73E-47 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Gene3D G3DSA:3.30.450.300 35 153 7.4E-6 T 13-10-2018 IPR038421 Sensor histidine kinase RisS, periplasmic domain superfamily Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SUPERFAMILY SSF158472 179 228 7.59E-5 T 13-10-2018 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 433 4.9E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SUPERFAMILY SSF55874 295 434 2.62E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Pfam PF00672 HAMP domain 179 226 3.9E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Pfam PF00578 AhpC/TSA family 474 602 2.8E-33 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SMART SM00304 178 230 1.4E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 288 3.6E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 Gene3D G3DSA:3.40.30.10 471 622 5.9E-42 T 13-10-2018 Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SMART SM00387 326 436 3.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3691 2ff3fd9acc78ef7bf5c683fb120ed96c 626 SUPERFAMILY SSF47384 214 287 4.71E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 Gene3D G3DSA:3.20.20.20 7 293 4.8E-99 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 PIRSF PIRSF004640 3 410 1.5E-130 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 Gene3D G3DSA:3.30.413.10 294 411 9.4E-38 T 13-10-2018 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 Pfam PF04551 GcpE protein 14 400 3.2E-114 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 10 400 9.2E-119 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Thivi_0806 d8d89fae70d35769363b2c0f351e9b65 415 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 8 404 29.545 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 1.9E-218 T 13-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 SMART SM01329 30 414 2.6E-175 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 Gene3D G3DSA:3.40.718.10 1 418 2.4E-181 T 13-10-2018 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 414 3.8E-111 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Thivi_4572 9091dfe509a613fe2b1869c84b6a5e48 418 SUPERFAMILY SSF53659 4 417 2.11E-142 T 13-10-2018 Thivi_2232 44b6d728fbd1e9c046ffe36c7ad01842 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 28 183 20.497 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Thivi_2232 44b6d728fbd1e9c046ffe36c7ad01842 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 45 183 2.0E-33 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Thivi_2232 44b6d728fbd1e9c046ffe36c7ad01842 185 Pfam PF03968 OstA-like protein 56 164 1.0E-23 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Thivi_2232 44b6d728fbd1e9c046ffe36c7ad01842 185 Gene3D G3DSA:2.60.450.10 48 185 9.4E-37 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 ProSitePatterns PS00746 NifH/frxC family signature 1. 88 100 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 4 277 3.8E-142 T 13-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 SUPERFAMILY SSF52540 3 276 1.47E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 Gene3D G3DSA:3.40.50.300 2 277 1.1E-73 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 13-10-2018 IPR030655 NifH/chlL conserved site Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 PIRSF PIRSF000363 2 278 1.0E-124 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 4 275 2.9E-138 T 13-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 PRINTS PR00091 Nitrogenase component II signature 9 22 8.6E-38 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 PRINTS PR00091 Nitrogenase component II signature 86 100 8.6E-38 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 PRINTS PR00091 Nitrogenase component II signature 31 46 8.6E-38 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 PRINTS PR00091 Nitrogenase component II signature 125 140 8.6E-38 T 13-10-2018 Thivi_3647 f610ee790c3247af5548125bb06b3fe8 293 Hamap MF_00533 Nitrogenase iron protein [nifH]. 3 276 52.088 T 13-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3935 10cd2498c4b4da796e7ba6d44587dd7d 329 SUPERFAMILY SSF48695 43 274 3.36E-28 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3935 10cd2498c4b4da796e7ba6d44587dd7d 329 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 156 197 2.9E-6 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3935 10cd2498c4b4da796e7ba6d44587dd7d 329 Pfam PF02335 Cytochrome c552 213 288 8.9E-6 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Thivi_3935 10cd2498c4b4da796e7ba6d44587dd7d 329 Gene3D G3DSA:3.90.10.10 126 256 8.7E-6 T 13-10-2018 Thivi_0963 bcc318002ca0873c3ebe6d12845796ab 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 209 25.031 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Thivi_0963 bcc318002ca0873c3ebe6d12845796ab 212 SUPERFAMILY SSF52374 1 210 1.69E-43 T 13-10-2018 Thivi_0963 bcc318002ca0873c3ebe6d12845796ab 212 Gene3D G3DSA:3.40.50.620 1 209 1.5E-52 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0963 bcc318002ca0873c3ebe6d12845796ab 212 Pfam PF01467 Cytidylyltransferase-like 4 182 4.1E-24 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_0963 bcc318002ca0873c3ebe6d12845796ab 212 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 208 4.6E-40 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 SUPERFAMILY SSF50615 10 94 1.83E-27 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Gene3D G3DSA:2.40.30.20 1 93 1.9E-31 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 PIRSF PIRSF039088 1 513 4.3E-234 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Gene3D G3DSA:1.20.150.20 383 513 2.3E-46 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 2.3E-248 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 SUPERFAMILY SSF47917 383 510 1.7E-46 T 13-10-2018 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.8E-45 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 SUPERFAMILY SSF52540 96 381 1.87E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Gene3D G3DSA:3.40.50.300 94 382 7.9E-132 T 13-10-2018 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 9.9E-12 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.357 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2594 71b6a6a2fdfafb650e950a761db0785a 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.3E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SUPERFAMILY SSF52172 191 325 1.15E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Pfam PF00563 EAL domain 506 736 3.5E-28 T 13-10-2018 IPR001633 EAL domain Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SMART SM00267 313 485 3.1E-7 T 13-10-2018 IPR000160 GGDEF domain Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SUPERFAMILY SSF141868 504 738 5.75E-29 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 481 1.2E-7 T 13-10-2018 IPR000160 GGDEF domain Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SMART SM00448 193 306 1.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Gene3D G3DSA:3.20.20.450 498 747 4.2E-31 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Gene3D G3DSA:3.30.70.270 326 495 1.3E-12 T 13-10-2018 Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Pfam PF00072 Response regulator receiver domain 195 306 7.0E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 Gene3D G3DSA:3.40.50.2300 187 325 1.9E-28 T 13-10-2018 Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SUPERFAMILY SSF55073 331 487 2.98E-12 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SMART SM00052 497 743 1.2E-12 T 13-10-2018 IPR001633 EAL domain Thivi_3454 8ded1e2ec179b480ff4e4c3ad2b7ad0a 753 SUPERFAMILY SSF52172 74 186 6.49E-5 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4619 cfe58109bc3051607f56e4936472081d 87 SUPERFAMILY SSF143011 1 83 6.41E-23 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_4619 cfe58109bc3051607f56e4936472081d 87 Gene3D G3DSA:3.30.2310.20 1 85 2.4E-25 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_4619 cfe58109bc3051607f56e4936472081d 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 2.1E-12 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thivi_4270 a03c295f3262c0adfecec3a135801b76 247 Pfam PF07589 PEP-CTERM motif 217 238 2.4E-6 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_4270 a03c295f3262c0adfecec3a135801b76 247 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 217 238 2.8E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_0974 00d297d8dbc98710b4038df335455053 829 Gene3D G3DSA:3.40.50.2000 41 824 0.0 T 13-10-2018 Thivi_0974 00d297d8dbc98710b4038df335455053 829 PIRSF PIRSF000460 9 829 2.4E-226 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_0974 00d297d8dbc98710b4038df335455053 829 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 667 679 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_0974 00d297d8dbc98710b4038df335455053 829 SUPERFAMILY SSF53756 17 826 0.0 T 13-10-2018 Thivi_0974 00d297d8dbc98710b4038df335455053 829 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 23 822 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_0974 00d297d8dbc98710b4038df335455053 829 Gene3D G3DSA:3.40.50.2000 480 807 0.0 T 13-10-2018 Thivi_0974 00d297d8dbc98710b4038df335455053 829 Pfam PF00343 Carbohydrate phosphorylase 111 822 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 Gene3D G3DSA:1.10.246.130 269 378 1.1E-29 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 SUPERFAMILY SSF56235 39 570 1.64E-163 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 155 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 302 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 470 487 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 447 462 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 174 1.6E-63 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 Gene3D G3DSA:3.60.20.40 382 569 9.4E-58 T 13-10-2018 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 43 563 9.4E-135 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Thivi_2993 670dbbebb0716be3fadbea380fa1abe2 571 Pfam PF01019 Gamma-glutamyltranspeptidase 57 566 5.6E-157 T 13-10-2018 Thivi_2065 522addd845708902aaa330be6b8db031 179 Pfam PF14316 Domain of unknown function (DUF4381) 2 159 3.5E-38 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 Thivi_2160 930038b22ac8a3c462dd2af1bef93d69 76 Pfam PF01206 Sulfurtransferase TusA 7 75 1.0E-23 T 13-10-2018 IPR001455 TusA-like domain Thivi_2160 930038b22ac8a3c462dd2af1bef93d69 76 SUPERFAMILY SSF64307 3 75 4.84E-24 T 13-10-2018 IPR036868 TusA-like domain superfamily Thivi_2160 930038b22ac8a3c462dd2af1bef93d69 76 Gene3D G3DSA:3.30.110.40 1 76 2.8E-30 T 13-10-2018 IPR036868 TusA-like domain superfamily Thivi_2160 930038b22ac8a3c462dd2af1bef93d69 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 13-10-2018 IPR001455 TusA-like domain Thivi_2550 a73bc11e4908a4793790763237f3075c 239 SUPERFAMILY SSF46785 147 222 8.73E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2550 a73bc11e4908a4793790763237f3075c 239 Pfam PF13545 Crp-like helix-turn-helix domain 150 216 4.9E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_2550 a73bc11e4908a4793790763237f3075c 239 Gene3D G3DSA:1.10.10.10 149 217 3.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2550 a73bc11e4908a4793790763237f3075c 239 SMART SM00419 162 210 7.1E-4 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_2550 a73bc11e4908a4793790763237f3075c 239 SMART SM00100 12 133 2.1E-4 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_2550 a73bc11e4908a4793790763237f3075c 239 SUPERFAMILY SSF51206 8 138 6.36E-12 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_2550 a73bc11e4908a4793790763237f3075c 239 Gene3D G3DSA:2.60.120.10 8 148 3.1E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Pfam PF00072 Response regulator receiver domain 443 554 8.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Pfam PF00072 Response regulator receiver domain 9 119 5.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Gene3D G3DSA:1.10.287.130 136 210 9.2E-27 T 13-10-2018 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Gene3D G3DSA:3.40.50.2300 1 135 1.3E-34 T 13-10-2018 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 8.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 8.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 369 8.0E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SMART SM00387 257 393 3.4E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Gene3D G3DSA:3.40.50.2300 430 555 9.9E-40 T 13-10-2018 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SUPERFAMILY SSF52172 4 134 8.11E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SMART SM00388 145 210 2.6E-25 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 210 2.2E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 388 7.6E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SUPERFAMILY SSF52172 439 555 4.41E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 Gene3D G3DSA:3.30.565.10 211 392 5.2E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SUPERFAMILY SSF47384 131 210 3.53E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SMART SM00448 6 119 3.0E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SMART SM00448 441 555 5.4E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4304 f73e7adb84a9a0e1eee6f888974c136a 556 SUPERFAMILY SSF55874 199 389 8.51E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3870 b38e1bbe47ebae355f5ed11242b2f574 289 SUPERFAMILY SSF51735 7 286 3.44E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3870 b38e1bbe47ebae355f5ed11242b2f574 289 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 213 1.1E-9 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Thivi_3870 b38e1bbe47ebae355f5ed11242b2f574 289 Gene3D G3DSA:3.40.50.720 1 289 9.8E-85 T 13-10-2018 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 Gene3D G3DSA:3.40.50.720 2 165 1.7E-50 T 13-10-2018 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.98 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 246 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 266 1.1E-33 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 8.3E-21 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 SUPERFAMILY SSF48179 163 270 4.76E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 PIRSF PIRSF000193 3 271 1.3E-72 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 SUPERFAMILY SSF51735 5 161 6.76E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 266 1.3E-75 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Thivi_3330 cec4a85ac66814b4c3d6ae509ba85b50 276 Gene3D G3DSA:1.10.3730.10 166 272 6.6E-39 T 13-10-2018 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 Pfam PF07687 Peptidase dimerisation domain 179 285 1.3E-20 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 Gene3D G3DSA:3.40.630.10 31 367 2.6E-82 T 13-10-2018 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 SUPERFAMILY SSF53187 7 383 2.6E-56 T 13-10-2018 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 383 51.505 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 146 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 Gene3D G3DSA:3.30.70.360 181 296 2.6E-82 T 13-10-2018 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 SUPERFAMILY SSF55031 181 295 6.73E-21 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 12 378 3.2E-120 T 13-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Thivi_2217 72707b72ef6624618d0ff73678a7382f 384 Pfam PF01546 Peptidase family M20/M25/M40 77 379 7.3E-32 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 Thivi_3190 79e1f2e46a17613c28001c42270274e1 411 Pfam PF08668 HDOD domain 150 332 4.3E-41 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_3190 79e1f2e46a17613c28001c42270274e1 411 SUPERFAMILY SSF109604 146 359 1.31E-48 T 13-10-2018 Thivi_3190 79e1f2e46a17613c28001c42270274e1 411 Gene3D G3DSA:1.10.3210.10 129 403 5.5E-57 T 13-10-2018 Thivi_3190 79e1f2e46a17613c28001c42270274e1 411 SUPERFAMILY SSF51206 10 117 5.71E-6 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0471 bc2c5b718a1df7a64c1ac980332496e1 114 Pfam PF07238 PilZ domain 8 112 5.4E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_0471 bc2c5b718a1df7a64c1ac980332496e1 114 SUPERFAMILY SSF141371 4 103 1.12E-5 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SUPERFAMILY SSF48168 156 373 1.05E-61 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Gene3D G3DSA:2.170.16.10 447 573 2.3E-8 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR00379 Intein signature 685 697 4.0E-12 T 13-10-2018 IPR006142 Intein GO:0016539 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR00379 Intein signature 801 818 4.0E-12 T 13-10-2018 IPR006142 Intein GO:0016539 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR00379 Intein signature 712 727 4.0E-12 T 13-10-2018 IPR006142 Intein GO:0016539 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR00379 Intein signature 572 584 4.0E-12 T 13-10-2018 IPR006142 Intein GO:0016539 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR00379 Intein signature 503 516 4.0E-12 T 13-10-2018 IPR006142 Intein GO:0016539 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 1066 1089 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 1000 1023 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 828 847 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 1038 1060 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 1142 1169 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 PRINTS PR01183 Ribonucleotide reductase large chain signature 963 974 9.2E-46 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Pfam PF14528 LAGLIDADG-like domain 685 769 6.8E-6 T 13-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Gene3D G3DSA:3.20.70.20 224 446 8.1E-57 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Gene3D G3DSA:3.20.70.20 813 1297 1.5E-186 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Pfam PF02867 Ribonucleotide reductase, barrel domain 375 446 2.1E-17 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Gene3D G3DSA:3.10.28.10 574 744 1.3E-19 T 13-10-2018 IPR027434 Homing endonuclease Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 297 369 3.6E-24 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SUPERFAMILY SSF51998 814 1290 2.32E-154 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 816 1290 1.8E-170 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SUPERFAMILY SSF51294 447 824 4.71E-18 T 13-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Pfam PF03477 ATP cone domain 35 131 1.6E-17 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SUPERFAMILY SSF55608 667 732 2.1E-9 T 13-10-2018 IPR027434 Homing endonuclease Thivi_3117 98551f855e7ee2329546bc116c145793 1349 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 1131 1153 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SMART SM00306 445 558 0.0058 T 13-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 SUPERFAMILY SSF51998 374 446 1.01E-21 T 13-10-2018 Thivi_3117 98551f855e7ee2329546bc116c145793 1349 Pfam PF02867 Ribonucleotide reductase, barrel domain 814 1287 3.6E-161 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_1032 0d908f63624285147e4718d796512a0b 403 Pfam PF01872 RibD C-terminal domain 158 391 2.7E-45 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Thivi_1032 0d908f63624285147e4718d796512a0b 403 SUPERFAMILY SSF53597 156 393 8.76E-55 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Thivi_1032 0d908f63624285147e4718d796512a0b 403 Gene3D G3DSA:3.40.430.10 147 402 4.0E-70 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Thivi_1032 0d908f63624285147e4718d796512a0b 403 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Thivi_1032 0d908f63624285147e4718d796512a0b 403 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 396 1.5E-56 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Thivi_1032 0d908f63624285147e4718d796512a0b 403 Gene3D G3DSA:3.40.140.10 10 146 2.7E-47 T 13-10-2018 Thivi_1032 0d908f63624285147e4718d796512a0b 403 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 14 110 4.1E-19 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Thivi_1032 0d908f63624285147e4718d796512a0b 403 PIRSF PIRSF006769 9 399 1.4E-126 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Thivi_1032 0d908f63624285147e4718d796512a0b 403 SUPERFAMILY SSF53927 14 156 1.77E-48 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Thivi_1032 0d908f63624285147e4718d796512a0b 403 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 391 2.0E-114 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Thivi_0651 0d615d1643130b2f4e90fda9ceeb6453 345 Pfam PF14238 Domain of unknown function (DUF4340) 87 262 2.4E-26 T 13-10-2018 IPR025641 Domain of unknown function DUF4340 Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 SUPERFAMILY SSF47336 2 77 1.96E-24 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 Gene3D G3DSA:1.10.1200.10 1 77 1.3E-29 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.015 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 73 0.006 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.5E-17 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Thivi_0019 2fdf53d8d353528e946e535d1bab6571 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 4.5E-36 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Thivi_4151 a53343b50a3dec708176eef918f48675 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 125 1.8E-50 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Thivi_4151 a53343b50a3dec708176eef918f48675 128 Gene3D G3DSA:3.30.1330.40 1 128 1.6E-51 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_4151 a53343b50a3dec708176eef918f48675 128 Pfam PF01042 Endoribonuclease L-PSP 9 125 6.0E-41 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Thivi_4151 a53343b50a3dec708176eef918f48675 128 SUPERFAMILY SSF55298 1 127 2.04E-45 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_4151 a53343b50a3dec708176eef918f48675 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00086 286 329 5.8E-8 T 13-10-2018 IPR001610 PAC motif Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00086 408 450 6.6E-7 T 13-10-2018 IPR001610 PAC motif Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Pfam PF00990 Diguanylate cyclase, GGDEF domain 461 623 3.9E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Gene3D G3DSA:3.30.450.20 335 459 7.1E-36 T 13-10-2018 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SUPERFAMILY SSF55785 344 447 6.98E-28 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 336 4.6E-12 T 13-10-2018 IPR000014 PAS domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 341 456 7.3E-18 T 13-10-2018 IPR000014 PAS domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00091 336 405 9.7E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00091 206 279 2.8 T 13-10-2018 IPR000014 PAS domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Pfam PF08447 PAS fold 234 323 4.7E-21 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00267 450 627 1.8E-51 T 13-10-2018 IPR000160 GGDEF domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 625 2.6E-40 T 13-10-2018 IPR000160 GGDEF domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Gene3D G3DSA:3.30.70.270 460 639 2.6E-58 T 13-10-2018 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Gene3D G3DSA:2.10.70.100 284 331 4.4E-12 T 13-10-2018 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Gene3D G3DSA:3.30.450.20 202 280 5.9E-16 T 13-10-2018 Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Pfam PF00563 EAL domain 644 877 6.8E-64 T 13-10-2018 IPR001633 EAL domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SUPERFAMILY SSF141868 643 886 3.53E-76 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SUPERFAMILY SSF55073 466 628 5.34E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SUPERFAMILY SSF55785 225 332 1.61E-21 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 SMART SM00052 637 883 8.8E-86 T 13-10-2018 IPR001633 EAL domain Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Gene3D G3DSA:3.20.20.450 640 891 1.1E-86 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2706 00264e8b24079105b3b9edd7a4f1c47d 892 Pfam PF13426 PAS domain 347 449 3.3E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1807 741bdc32d80733b02f9c80d04dc46d53 244 Gene3D G3DSA:3.40.50.720 8 244 1.7E-78 T 13-10-2018 Thivi_1807 741bdc32d80733b02f9c80d04dc46d53 244 SUPERFAMILY SSF69572 7 242 4.84E-57 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Thivi_1807 741bdc32d80733b02f9c80d04dc46d53 244 Pfam PF00899 ThiF family 14 163 7.0E-36 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Thivi_1992 ac4d60e5f280e480d70eedc2477a6618 450 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 152 430 3.7E-56 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1992 ac4d60e5f280e480d70eedc2477a6618 450 Gene3D G3DSA:3.30.70.150 1 146 9.5E-36 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1992 ac4d60e5f280e480d70eedc2477a6618 450 SUPERFAMILY SSF54966 5 146 4.84E-40 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1992 ac4d60e5f280e480d70eedc2477a6618 450 SUPERFAMILY SSF51649 147 428 2.49E-86 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1992 ac4d60e5f280e480d70eedc2477a6618 450 Gene3D G3DSA:3.20.20.110 147 434 1.3E-99 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1600 df8abc6dcf1f8eb7d4b0097e7364e65a 220 Pfam PF01551 Peptidase family M23 101 196 1.8E-35 T 13-10-2018 IPR016047 Peptidase M23 Thivi_1600 df8abc6dcf1f8eb7d4b0097e7364e65a 220 Gene3D G3DSA:2.70.70.10 48 203 4.4E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_1600 df8abc6dcf1f8eb7d4b0097e7364e65a 220 SUPERFAMILY SSF51261 67 199 1.73E-61 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 SUPERFAMILY SSF53748 3 389 2.24E-142 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 Gene3D G3DSA:3.40.50.1260 166 379 6.2E-147 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 Gene3D G3DSA:3.40.50.1260 8 387 6.2E-147 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PIRSF PIRSF000724 1 393 2.6E-132 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 389 38.062 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 Pfam PF00162 Phosphoglycerate kinase 7 379 1.9E-139 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 342 353 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_2344 61eca0a64ed960ecf2696d44cecc8dda 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 9.2E-80 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_3797 4cb93700417b0860898c086638d85a31 291 SUPERFAMILY SSF56112 5 283 7.58E-42 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3797 4cb93700417b0860898c086638d85a31 291 Gene3D G3DSA:3.90.1200.10 103 290 6.1E-63 T 13-10-2018 Thivi_3797 4cb93700417b0860898c086638d85a31 291 Pfam PF03881 Fructosamine kinase 4 288 9.2E-102 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Thivi_3797 4cb93700417b0860898c086638d85a31 291 Gene3D G3DSA:3.30.200.20 2 95 2.7E-16 T 13-10-2018 Thivi_3797 4cb93700417b0860898c086638d85a31 291 PIRSF PIRSF006221 3 291 9.6E-94 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 Thivi_0519 90b50c92c30dc0837e700d3abe46621e 408 Pfam PF11899 Protein of unknown function (DUF3419) 27 404 1.9E-118 T 13-10-2018 IPR021829 Protein of unknown function DUF3419 Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 SUPERFAMILY SSF56349 100 403 3.53E-50 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 Gene3D G3DSA:1.10.150.130 102 183 1.3E-32 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 Gene3D G3DSA:1.10.443.10 221 406 2.4E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 Pfam PF00589 Phage integrase family 239 385 4.1E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 Pfam PF13356 Arm DNA-binding domain 3 83 3.7E-14 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Thivi_0596 0db6db29898771ea5a34fd80f145909a 433 Gene3D G3DSA:3.30.160.390 1 101 1.7E-21 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 260 286 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 34 53 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 158 179 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 410 427 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 134 158 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 53 69 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PRINTS PR01806 Virulence factor MviN signature 358 377 4.2E-77 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 Pfam PF03023 MviN-like protein 29 472 2.3E-138 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 502 1.3E-138 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 PIRSF PIRSF002869 2 510 3.3E-158 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_0472 df86e16d620573ba08696d86be5a83e3 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 4 468 19.737 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Thivi_1225 350a44da464d7890571cf32c8f734392 121 Gene3D G3DSA:3.40.50.12740 1 121 5.0E-39 T 13-10-2018 Thivi_1225 350a44da464d7890571cf32c8f734392 121 SUPERFAMILY SSF52172 3 120 3.42E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1225 350a44da464d7890571cf32c8f734392 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1225 350a44da464d7890571cf32c8f734392 121 SMART SM00448 3 116 1.9E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 SMART SM00470 65 160 7.0E-34 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 Pfam PF02195 ParB-like nuclease domain 67 160 2.0E-25 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 Gene3D G3DSA:1.10.10.2830 148 260 1.6E-35 T 13-10-2018 Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 Gene3D G3DSA:3.90.1530.30 78 146 1.8E-27 T 13-10-2018 Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 63 241 1.0E-56 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 SUPERFAMILY SSF109709 152 262 3.4E-31 T 13-10-2018 Thivi_2600 bf16501837249eb896581bbf76d76fd9 326 SUPERFAMILY SSF110849 65 162 9.42E-27 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 Gene3D G3DSA:3.10.620.30 319 494 4.9E-20 T 13-10-2018 Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 Pfam PF01841 Transglutaminase-like superfamily 386 474 2.5E-19 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 SMART SM00460 405 476 1.3E-19 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 Pfam PF13559 Domain of unknown function (DUF4129) 588 644 3.4E-9 T 13-10-2018 IPR025403 Domain of unknown function DUF4129 Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 Pfam PF11992 Domain of unknown function (DUF3488) 18 330 5.3E-101 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 Thivi_3627 188dc05aa87ab190a2eb51352a79089c 665 SUPERFAMILY SSF54001 280 606 2.38E-57 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_1224 0e953679601d2da9286564c85a41301a 759 Pfam PF01627 Hpt domain 8 106 2.4E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Gene3D G3DSA:3.30.565.10 436 619 5.1E-55 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1224 0e953679601d2da9286564c85a41301a 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1224 0e953679601d2da9286564c85a41301a 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 539 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1224 0e953679601d2da9286564c85a41301a 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 5.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Gene3D G3DSA:2.40.50.180 643 707 1.5E-36 T 13-10-2018 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 374 435 4.3E-16 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Gene3D G3DSA:2.30.30.40 620 748 1.5E-36 T 13-10-2018 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Gene3D G3DSA:1.20.120.160 1 137 1.8E-40 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Gene3D G3DSA:1.10.287.560 373 435 9.6E-16 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 619 4.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1224 0e953679601d2da9286564c85a41301a 759 SUPERFAMILY SSF47384 373 436 9.42E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SUPERFAMILY SSF55874 438 618 4.98E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1224 0e953679601d2da9286564c85a41301a 759 SMART SM00260 612 752 4.1E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SMART SM01231 372 435 6.4E-20 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SUPERFAMILY SSF50341 619 752 4.97E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SMART SM00073 5 102 1.1E-28 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SUPERFAMILY SSF47226 4 126 2.09E-32 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_1224 0e953679601d2da9286564c85a41301a 759 Pfam PF01584 CheW-like domain 625 753 9.4E-26 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1224 0e953679601d2da9286564c85a41301a 759 SMART SM00387 480 620 1.2E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3286 289188a95787175589e5c9170718b6a8 137 Gene3D G3DSA:3.90.1010.10 2 137 7.5E-43 T 13-10-2018 Thivi_3286 289188a95787175589e5c9170718b6a8 137 Pfam PF02657 Fe-S metabolism associated domain 11 134 3.2E-37 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Thivi_3286 289188a95787175589e5c9170718b6a8 137 SUPERFAMILY SSF82649 5 136 1.52E-35 T 13-10-2018 Thivi_0769 a32954073f85e2dbb132f243a22e4edc 105 SUPERFAMILY SSF82657 3 88 1.57E-27 T 13-10-2018 IPR036065 BolA-like superfamily Thivi_0769 a32954073f85e2dbb132f243a22e4edc 105 Pfam PF01722 BolA-like protein 11 85 3.9E-27 T 13-10-2018 IPR002634 BolA protein Thivi_0769 a32954073f85e2dbb132f243a22e4edc 105 PIRSF PIRSF003113 1 100 5.7E-35 T 13-10-2018 IPR002634 BolA protein Thivi_0769 a32954073f85e2dbb132f243a22e4edc 105 Gene3D G3DSA:3.30.300.90 1 90 7.8E-31 T 13-10-2018 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 Gene3D G3DSA:1.10.10.10 2 90 3.4E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 Gene3D G3DSA:3.40.190.10 91 292 5.6E-70 T 13-10-2018 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 Pfam PF03466 LysR substrate binding domain 89 295 2.8E-39 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 SUPERFAMILY SSF46785 1 113 2.05E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 SUPERFAMILY SSF53850 90 300 2.02E-38 T 13-10-2018 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.5E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1685 bce996b33a1b1a6a0a94770525b38a07 328 Gene3D G3DSA:3.40.190.10 164 269 5.6E-70 T 13-10-2018 Thivi_3309 a7e099d36acf74bacfbe287f4d6845c6 373 PIRSF PIRSF006268 16 351 5.8E-56 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_3309 a7e099d36acf74bacfbe287f4d6845c6 373 SUPERFAMILY SSF143631 42 345 1.02E-59 T 13-10-2018 IPR003374 ApbE-like superfamily Thivi_3309 a7e099d36acf74bacfbe287f4d6845c6 373 Gene3D G3DSA:3.10.520.20 33 354 2.6E-64 T 13-10-2018 Thivi_3309 a7e099d36acf74bacfbe287f4d6845c6 373 Pfam PF02424 ApbE family 49 321 3.2E-54 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Thivi_1207 79b89508e1853c36faba082118bb966f 378 Gene3D G3DSA:3.40.50.2300 2 134 3.0E-37 T 13-10-2018 Thivi_1207 79b89508e1853c36faba082118bb966f 378 Gene3D G3DSA:1.10.3210.10 144 372 8.8E-71 T 13-10-2018 Thivi_1207 79b89508e1853c36faba082118bb966f 378 SUPERFAMILY SSF109604 163 358 1.98E-32 T 13-10-2018 Thivi_1207 79b89508e1853c36faba082118bb966f 378 Pfam PF00072 Response regulator receiver domain 6 117 3.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1207 79b89508e1853c36faba082118bb966f 378 SMART SM00448 4 117 1.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1207 79b89508e1853c36faba082118bb966f 378 Pfam PF01966 HD domain 171 319 1.5E-16 T 13-10-2018 IPR006674 HD domain Thivi_1207 79b89508e1853c36faba082118bb966f 378 SMART SM00471 166 329 6.1E-7 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1207 79b89508e1853c36faba082118bb966f 378 SUPERFAMILY SSF52172 3 146 9.11E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 Gene3D G3DSA:3.40.50.10300 176 393 1.3E-75 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 381 1.3E-130 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 Pfam PF02441 Flavoprotein 2 169 7.5E-43 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 SUPERFAMILY SSF102645 175 387 1.11E-71 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 177 359 2.8E-67 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 SUPERFAMILY SSF52507 1 170 9.16E-60 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Thivi_2718 38d9eb54bf1ce2893e09353c7bdf90ee 395 Gene3D G3DSA:3.40.50.1950 1 175 1.8E-54 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 Gene3D G3DSA:3.40.800.20 1 309 1.1E-109 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 Pfam PF00850 Histone deacetylase domain 20 306 7.0E-80 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 SUPERFAMILY SSF52768 1 309 4.8E-97 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 PRINTS PR01270 Histone deacetylase superfamily signature 237 247 2.4E-15 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 PRINTS PR01270 Histone deacetylase superfamily signature 125 148 2.4E-15 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Thivi_0598 fc2c42d6647b5edfcb8aa532c5279b38 311 PRINTS PR01270 Histone deacetylase superfamily signature 159 174 2.4E-15 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Thivi_4500 6c5f4bc55cd1c9218f969dfa1206527a 413 SUPERFAMILY SSF53448 20 363 8.96E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4500 6c5f4bc55cd1c9218f969dfa1206527a 413 Pfam PF00483 Nucleotidyl transferase 20 275 8.3E-28 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_4500 6c5f4bc55cd1c9218f969dfa1206527a 413 SUPERFAMILY SSF51161 301 408 2.51E-16 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_4500 6c5f4bc55cd1c9218f969dfa1206527a 413 Gene3D G3DSA:2.160.10.10 291 410 3.4E-31 T 13-10-2018 Thivi_4500 6c5f4bc55cd1c9218f969dfa1206527a 413 Gene3D G3DSA:3.90.550.10 1 290 5.4E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3863 2b6a744ab1b451c601bdba4d474d1e37 185 Pfam PF08750 CNP1-like family 41 170 1.4E-37 T 13-10-2018 IPR014861 Uncharacterised domain CNP1 Thivi_2139 ff78ef6b8497849f39a2cf706134e553 329 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 1.4E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2139 ff78ef6b8497849f39a2cf706134e553 329 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2139 ff78ef6b8497849f39a2cf706134e553 329 Pfam PF16074 Type IV Pilus-assembly protein W 232 309 4.7E-6 T 13-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 Thivi_2925 496ae571897783ab96ffcddb7e2f1e23 318 Pfam PF05235 CHAD domain 25 255 7.4E-55 T 13-10-2018 IPR007899 CHAD domain Thivi_2925 496ae571897783ab96ffcddb7e2f1e23 318 Gene3D G3DSA:1.40.20.10 1 318 7.3E-85 T 13-10-2018 IPR038186 CHAD domain superfamily Thivi_2925 496ae571897783ab96ffcddb7e2f1e23 318 SMART SM00880 24 290 3.3E-67 T 13-10-2018 IPR007899 CHAD domain Thivi_0332 bbaa4569ea2d11456d281b2e491c044e 130 Pfam PF01740 STAS domain 7 89 5.2E-6 T 13-10-2018 IPR002645 STAS domain Thivi_0332 bbaa4569ea2d11456d281b2e491c044e 130 SUPERFAMILY SSF52091 1 95 2.94E-12 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0332 bbaa4569ea2d11456d281b2e491c044e 130 Gene3D G3DSA:3.30.750.24 1 119 2.5E-23 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.9E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 2.9E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 2.9E-7 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 7.9E-80 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Gene3D G3DSA:1.20.1640.10 451 606 4.6E-8 T 13-10-2018 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Pfam PF13721 SecD export protein N-terminal TM region 1 103 6.0E-29 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 SUPERFAMILY SSF82866 414 609 2.09E-44 T 13-10-2018 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 3.6E-144 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Pfam PF07549 SecD/SecF GG Motif 119 141 3.0E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Gene3D G3DSA:3.30.70.3400 220 441 2.5E-45 T 13-10-2018 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 617 47.063 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Gene3D G3DSA:3.30.1360.200 280 435 2.5E-45 T 13-10-2018 Thivi_3127 ef73f4e77ebef888b69713dfd2bc54d6 618 Pfam PF02355 Protein export membrane protein 437 604 1.7E-21 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thivi_0690 cbf3eb0d3101afdd48ecc5a14d1b1f85 222 Gene3D G3DSA:1.10.3810.10 39 220 1.9E-46 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0690 cbf3eb0d3101afdd48ecc5a14d1b1f85 222 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 6 213 4.3E-71 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0690 cbf3eb0d3101afdd48ecc5a14d1b1f85 222 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 2 216 35.414 T 13-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0690 cbf3eb0d3101afdd48ecc5a14d1b1f85 222 SUPERFAMILY SSF53955 42 215 7.87E-55 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_0690 cbf3eb0d3101afdd48ecc5a14d1b1f85 222 Pfam PF00912 Transglycosylase 48 210 3.6E-43 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3275 d4601cd9603267c57b1674dd8dc8b434 436 SUPERFAMILY SSF51445 3 332 6.91E-60 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_3275 d4601cd9603267c57b1674dd8dc8b434 436 Pfam PF14701 Glycogen debranching enzyme, glucanotransferase domain 3 107 2.1E-20 T 13-10-2018 IPR032792 Glycogen debranching enzyme, glucanotransferase domain KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Thivi_3275 d4601cd9603267c57b1674dd8dc8b434 436 SMART SM00642 5 325 6.2E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_3275 d4601cd9603267c57b1674dd8dc8b434 436 Gene3D G3DSA:3.20.20.80 1 334 3.6E-70 T 13-10-2018 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 11 297 7.7E-66 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Gene3D G3DSA:1.20.58.1490 2 70 1.3E-14 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Gene3D G3DSA:1.10.760.10 83 294 2.2E-47 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 SUPERFAMILY SSF46626 189 297 8.57E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 PIRSF PIRSF000006 1 298 7.3E-67 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 SUPERFAMILY SSF46626 29 186 6.15E-25 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 196 291 6.7E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 109 182 6.3E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 9 56 9.3E-20 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Thivi_1044 f02fbdca14c6576be4420c5d976f4d42 298 Gene3D G3DSA:1.10.760.10 163 269 2.2E-47 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1169 3846cd0f10cf1f6ae10c1d9ef4dee464 260 SUPERFAMILY SSF52540 4 215 2.66E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1169 3846cd0f10cf1f6ae10c1d9ef4dee464 260 Gene3D G3DSA:3.40.50.300 5 252 1.6E-62 T 13-10-2018 Thivi_1169 3846cd0f10cf1f6ae10c1d9ef4dee464 260 SMART SM00382 30 213 1.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1169 3846cd0f10cf1f6ae10c1d9ef4dee464 260 Pfam PF00005 ABC transporter 21 168 4.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1169 3846cd0f10cf1f6ae10c1d9ef4dee464 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 Gene3D G3DSA:1.10.1660.10 14 152 3.1E-35 T 13-10-2018 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 Pfam PF13411 MerR HTH family regulatory protein 13 80 4.8E-21 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 1.6E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 1.6E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 1.6E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 SUPERFAMILY SSF46955 13 138 1.25E-35 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 SMART SM00422 13 82 1.8E-31 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Thivi_1636 82dfbc98344d658616f4549fbb4f32d1 162 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 13 139 3.9E-46 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 Pfam PF02154 Flagellar motor switch protein FliM 41 233 3.2E-70 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 215 233 3.7E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 5 18 3.7E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 117 136 3.7E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 PRINTS PR00955 Flagellar motor switch protein FliM signature 92 108 3.7E-23 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 SUPERFAMILY SSF103039 7 234 2.51E-20 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 255 323 3.9E-17 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 6 323 5.9E-104 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 SUPERFAMILY SSF101801 252 325 2.35E-13 T 13-10-2018 IPR036429 SpoA-like superfamily Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 PIRSF PIRSF002888 4 326 1.8E-92 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Thivi_0365 fa450116b542cd3de24652143b3f9f69 326 Gene3D G3DSA:3.40.1550.10 47 234 1.3E-54 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_3893 b2b4e949b3d6d5033143879d1714e400 69 SUPERFAMILY SSF46689 4 62 1.08E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3893 b2b4e949b3d6d5033143879d1714e400 69 Pfam PF04255 Protein of unknown function (DUF433) 7 62 1.1E-24 T 13-10-2018 IPR007367 Protein of unknown function DUF433 Thivi_3893 b2b4e949b3d6d5033143879d1714e400 69 Gene3D G3DSA:1.10.10.10 6 65 5.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1053 6bc47b0f398c707ec66e2b5324623252 491 Pfam PF00361 Proton-conducting membrane transporter 127 413 1.3E-59 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1053 6bc47b0f398c707ec66e2b5324623252 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 320 339 2.0E-6 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1053 6bc47b0f398c707ec66e2b5324623252 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 372 398 2.0E-6 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1053 6bc47b0f398c707ec66e2b5324623252 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 2.0E-6 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 SMART SM00448 4 119 9.6E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 Pfam PF00072 Response regulator receiver domain 6 108 7.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-29 T 13-10-2018 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 Pfam PF01339 CheB methylesterase 178 355 4.6E-55 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 PIRSF PIRSF000876 1 364 4.7E-127 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 SUPERFAMILY SSF52172 4 115 1.57E-27 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 SUPERFAMILY SSF52738 174 361 4.97E-68 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 361 38.89 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0320 d9c2754885d4eeeea6840e253a667689 372 Gene3D G3DSA:3.40.50.180 168 367 6.4E-70 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 132 150 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 Gene3D G3DSA:1.10.10.1590 18 91 7.6E-25 T 13-10-2018 Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 174 5.2E-52 T 13-10-2018 Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 Gene3D G3DSA:3.40.30.10 92 173 9.9E-28 T 13-10-2018 Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 28 174 3.4E-55 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 SUPERFAMILY SSF52833 20 174 5.59E-51 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3916 636cec88595cea7aad1c4bdcc0b9f56d 175 PIRSF PIRSF000216 9 175 2.2E-59 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3899 86eee5fe74366342183e4f633a4e803b 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 18.498 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Thivi_3899 86eee5fe74366342183e4f633a4e803b 66 SUPERFAMILY SSF57716 2 57 2.14E-18 T 13-10-2018 Thivi_3899 86eee5fe74366342183e4f633a4e803b 66 Pfam PF03884 DNA gyrase inhibitor YacG 5 52 6.1E-23 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Thivi_3899 86eee5fe74366342183e4f633a4e803b 66 Gene3D G3DSA:3.30.50.10 1 63 6.9E-23 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 200 3.9E-14 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 Pfam PF00578 AhpC/TSA family 15 143 2.7E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 Hamap MF_00401 Peroxiredoxin. 12 217 44.762 T 13-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 Gene3D G3DSA:3.40.30.10 13 152 2.1E-46 T 13-10-2018 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 SUPERFAMILY SSF52833 11 216 8.34E-70 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 Gene3D G3DSA:3.30.1020.20 153 217 9.3E-26 T 13-10-2018 Thivi_3350 9a60227cd88df6bc5aee0802841c7f2e 217 PIRSF PIRSF000239 8 217 2.1E-75 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_2516 83e2a9ad0aedc53d6b8e592555111326 270 SUPERFAMILY SSF81345 15 251 3.4E-7 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Thivi_2516 83e2a9ad0aedc53d6b8e592555111326 270 Pfam PF00950 ABC 3 transport family 18 253 1.1E-9 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 SUPERFAMILY SSF111369 74 123 3.27E-5 T 13-10-2018 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 Gene3D G3DSA:2.40.50.100 72 130 3.0E-8 T 13-10-2018 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 Gene3D G3DSA:2.40.50.100 298 334 1.0E-9 T 13-10-2018 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 367 390 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 367 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 310 331 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 410 425 2.0E-58 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 Gene3D G3DSA:2.40.30.170 335 423 1.0E-9 T 13-10-2018 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 29 446 4.7E-122 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 Gene3D G3DSA:1.10.287.470 197 297 1.0E-9 T 13-10-2018 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 ProSitePatterns PS00543 HlyD family secretion proteins signature. 410 432 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Thivi_1937 722afb0b1ab1ef205b59817bddc1bfb7 446 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 402 5.0E-15 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_1059 97396f71d5a891d80fe693daf527b635 68 SUPERFAMILY SSF143100 6 60 8.76E-14 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_1059 97396f71d5a891d80fe693daf527b635 68 Gene3D G3DSA:3.30.160.250 1 66 1.6E-7 T 13-10-2018 Thivi_0837 22fab3db51e7faa21483e43d1a0a8b00 143 Pfam PF01724 Domain of unknown function DUF29 3 140 4.2E-48 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_0837 22fab3db51e7faa21483e43d1a0a8b00 143 Gene3D G3DSA:1.20.1220.20 1 143 9.2E-32 T 13-10-2018 Thivi_2298 17be58e4dd7dfb0514726159e0c654cb 547 Pfam PF00498 FHA domain 28 97 7.4E-13 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2298 17be58e4dd7dfb0514726159e0c654cb 547 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 4 521 1.6E-90 T 13-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein Thivi_2298 17be58e4dd7dfb0514726159e0c654cb 547 Gene3D G3DSA:2.60.200.20 1 106 1.6E-21 T 13-10-2018 Thivi_2298 17be58e4dd7dfb0514726159e0c654cb 547 SUPERFAMILY SSF49879 20 109 8.8E-22 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_2298 17be58e4dd7dfb0514726159e0c654cb 547 SMART SM00240 27 78 2.3E-7 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_4109 11462279c178a7499ef0ba8672256398 278 SUPERFAMILY SSF53850 24 275 2.01E-35 T 13-10-2018 Thivi_4109 11462279c178a7499ef0ba8672256398 278 Pfam PF12849 PBP superfamily domain 30 259 5.1E-14 T 13-10-2018 IPR024370 PBP domain Thivi_4109 11462279c178a7499ef0ba8672256398 278 Gene3D G3DSA:3.40.190.10 40 266 3.2E-35 T 13-10-2018 Thivi_4109 11462279c178a7499ef0ba8672256398 278 Gene3D G3DSA:3.40.190.10 106 236 3.2E-35 T 13-10-2018 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 TIGRFAM TIGR01933 hflK: HflK protein 87 349 1.3E-97 T 13-10-2018 IPR010201 HflK GO:0016021 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 PRINTS PR00721 Stomatin signature 140 161 7.4E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 PRINTS PR00721 Stomatin signature 92 114 7.4E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 PRINTS PR00721 Stomatin signature 222 240 7.4E-6 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 SMART SM00244 85 246 2.6E-25 T 13-10-2018 IPR001107 Band 7 domain Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 SUPERFAMILY SSF117892 120 253 4.45E-18 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 Gene3D G3DSA:3.30.479.30 115 248 8.1E-15 T 13-10-2018 Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 Pfam PF12221 Bacterial membrane protein N terminal 1 45 4.4E-17 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal Thivi_0411 c9a2d658fee6415f4a26f259df8d23a9 390 Pfam PF01145 SPFH domain / Band 7 family 89 261 1.5E-23 T 13-10-2018 IPR001107 Band 7 domain Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Pfam PF10410 DnaB-helicase binding domain of primase 366 418 1.9E-12 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Hamap MF_00974 DNA primase [dnaG]. 4 576 28.926 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 248 1.1E-38 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Gene3D G3DSA:3.90.980.10 107 237 1.0E-41 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 SMART SM00493 256 327 5.3E-21 T 13-10-2018 IPR006171 TOPRIM domain Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Gene3D G3DSA:3.90.580.10 1 100 2.3E-38 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 SUPERFAMILY SSF117023 442 553 4.05E-17 T 13-10-2018 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Pfam PF13662 Toprim domain 258 322 6.9E-15 T 13-10-2018 IPR006171 TOPRIM domain Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 SUPERFAMILY SSF56731 113 420 8.72E-106 T 13-10-2018 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Gene3D G3DSA:1.20.50.20 365 422 2.4E-13 T 13-10-2018 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 SUPERFAMILY SSF57783 4 98 1.7E-36 T 13-10-2018 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Gene3D G3DSA:1.10.860.10 434 566 1.5E-18 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 SMART SM00400 36 90 7.9E-32 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Pfam PF08278 DNA primase DnaG DnaB-binding 446 548 1.2E-18 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Gene3D G3DSA:3.40.1360.10 238 364 4.5E-41 T 13-10-2018 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 Pfam PF01807 CHC2 zinc finger 6 99 1.6E-38 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_4083 c3c22aa24b895e46c4122fd027a452f3 582 TIGRFAM TIGR01391 dnaG: DNA primase 4 414 4.5E-141 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 350 429 4.9E-7 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 Hamap MF_01498 DNA repair protein RadA [radA]. 23 454 44.055 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 SMART SM00382 90 243 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 212 240 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 173 197 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 123 140 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 247 273 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 321 344 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 12 36 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 PRINTS PR01874 DNA repair protein radA signature 82 110 2.1E-93 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 4 450 2.4E-191 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 SUPERFAMILY SSF52540 68 292 1.57E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 Gene3D G3DSA:3.40.50.300 65 286 5.3E-40 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 SUPERFAMILY SSF54211 254 451 6.83E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 Pfam PF13481 AAA domain 73 221 1.5E-14 T 13-10-2018 Thivi_2667 2e872cfce94c8c82c737cc55ca22ad1f 454 Gene3D G3DSA:3.30.230.10 324 454 2.4E-12 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 1 36 3.6E-12 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Gene3D G3DSA:3.40.50.11610 718 924 2.0E-162 T 13-10-2018 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 SMART SM00861 588 781 3.8E-55 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 SUPERFAMILY SSF52518 112 515 2.22E-85 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 PIRSF PIRSF000157 1 929 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 3 926 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 785 927 1.1E-47 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 SUPERFAMILY SSF52518 571 788 1.96E-48 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Gene3D G3DSA:1.10.287.1150 75 157 5.7E-21 T 13-10-2018 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Pfam PF02779 Transketolase, pyrimidine binding domain 588 781 2.4E-60 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Pfam PF00676 Dehydrogenase E1 component 206 510 3.1E-52 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Gene3D G3DSA:3.40.50.970 158 518 9.8E-143 T 13-10-2018 Thivi_3855 49f7ba7d489522d8dce25a8f995b99ef 942 Gene3D G3DSA:3.40.50.12470 551 797 2.0E-162 T 13-10-2018 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Gene3D G3DSA:1.10.10.10 531 615 1.7E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Gene3D G3DSA:1.10.601.10 113 450 4.3E-125 T 13-10-2018 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 2.6E-38 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF04545 Sigma-70, region 4 550 602 1.8E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF04539 Sigma-70 region 3 460 536 1.4E-29 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 SUPERFAMILY SSF88659 454 527 6.73E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 614 44.056 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF00140 Sigma-70 factor, region 1.2 98 129 9.7E-12 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Gene3D G3DSA:1.10.10.10 454 529 3.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 PRINTS PR00046 Major sigma-70 factor signature 553 565 5.8E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 PRINTS PR00046 Major sigma-70 factor signature 429 437 5.8E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 PRINTS PR00046 Major sigma-70 factor signature 589 600 5.8E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 PRINTS PR00046 Major sigma-70 factor signature 405 418 5.8E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 PRINTS PR00046 Major sigma-70 factor signature 574 589 5.8E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 2.7E-120 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF04546 Sigma-70, non-essential region 139 350 4.9E-59 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Gene3D G3DSA:1.10.220.120 1 65 4.3E-26 T 13-10-2018 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 SUPERFAMILY SSF88946 115 448 3.4E-97 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.4E-27 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Thivi_4084 8388ff40907fc1fe6033abb8aef0d112 616 SUPERFAMILY SSF88659 511 613 8.41E-27 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Gene3D G3DSA:3.30.565.10 241 408 6.3E-55 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SMART SM00388 177 242 7.7E-27 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SMART SM00387 289 406 1.4E-42 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SUPERFAMILY SSF52172 566 686 1.39E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 405 7.7E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Pfam PF00512 His Kinase A (phospho-acceptor) domain 177 242 1.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Pfam PF00072 Response regulator receiver domain 569 681 1.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Pfam PF00072 Response regulator receiver domain 425 540 1.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SUPERFAMILY SSF52172 421 545 5.98E-30 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Gene3D G3DSA:3.40.50.12740 421 559 1.5E-28 T 13-10-2018 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Gene3D G3DSA:3.40.50.12740 566 690 3.8E-46 T 13-10-2018 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SUPERFAMILY SSF55874 231 408 6.55E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 Gene3D G3DSA:1.10.287.130 147 240 1.1E-29 T 13-10-2018 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SMART SM00448 567 681 5.4E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SMART SM00448 422 540 6.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 2.9E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 359 2.9E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 2.9E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 2.9E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0647 fc9aabbeab69d3cfe58a72f9f741f260 690 SUPERFAMILY SSF47384 163 244 2.35E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0335 a63aff82aaa91202c66155a8fca17b1f 205 SUPERFAMILY SSF81606 28 201 4.71E-12 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_0335 a63aff82aaa91202c66155a8fca17b1f 205 SMART SM00331 14 204 2.8E-4 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_0335 a63aff82aaa91202c66155a8fca17b1f 205 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 40 170 2.8E-10 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_0335 a63aff82aaa91202c66155a8fca17b1f 205 Gene3D G3DSA:3.60.40.10 16 203 2.0E-30 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 Gene3D G3DSA:3.40.50.150 22 243 2.2E-76 T 13-10-2018 Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 163 178 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 52 241 3.5E-60 T 13-10-2018 Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 40 240 1.7E-59 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 SUPERFAMILY SSF53335 52 240 6.56E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4478 3e7cba882b0ea179aa5d868296aeba33 244 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 23 244 37.654 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_0617 a84ecc43b9e54dd6c1d4473968430a57 100 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 99 2.0E-16 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Thivi_0617 a84ecc43b9e54dd6c1d4473968430a57 100 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 86 1.1E-17 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Thivi_0617 a84ecc43b9e54dd6c1d4473968430a57 100 Gene3D G3DSA:3.30.110.60 1 99 4.4E-30 T 13-10-2018 IPR035920 YhbY-like superfamily Thivi_0617 a84ecc43b9e54dd6c1d4473968430a57 100 SMART SM01103 3 86 7.6E-31 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Thivi_0617 a84ecc43b9e54dd6c1d4473968430a57 100 SUPERFAMILY SSF75471 1 92 9.16E-25 T 13-10-2018 IPR035920 YhbY-like superfamily Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 461 7.6E-187 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 Gene3D G3DSA:3.80.30.20 2 367 7.7E-120 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 SUPERFAMILY SSF102114 7 448 2.75E-131 T 13-10-2018 Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 SMART SM00729 53 276 2.9E-44 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 Gene3D G3DSA:1.10.10.920 368 461 1.7E-31 T 13-10-2018 Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 Pfam PF04055 Radical SAM superfamily 59 232 1.8E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_0626 36050039a93bb5a4f3dde66b4b92a1b6 461 PIRSF PIRSF000167 6 457 4.5E-160 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 SUPERFAMILY SSF140990 402 604 2.75E-76 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Pfam PF06480 FtsH Extracellular 5 82 7.5E-14 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Gene3D G3DSA:3.40.50.300 137 322 6.0E-71 T 13-10-2018 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Pfam PF01434 Peptidase family M41 382 592 1.1E-81 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 98 593 7.3E-244 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Gene3D G3DSA:1.10.8.60 323 396 1.6E-28 T 13-10-2018 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Gene3D G3DSA:1.20.58.760 397 598 5.9E-74 T 13-10-2018 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 SUPERFAMILY SSF52540 143 391 2.21E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 8.8E-47 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Gene3D G3DSA:2.40.50.920 24 99 1.4E-14 T 13-10-2018 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.736 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Thivi_0938 8c0f5265f03832e6173aeec0c70dcc79 638 SMART SM00382 184 323 5.1E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 SUPERFAMILY SSF52283 20 140 2.84E-25 T 13-10-2018 Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 Gene3D G3DSA:3.40.50.720 101 288 5.5E-115 T 13-10-2018 Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 2.3E-54 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 319 1.3E-24 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 SUPERFAMILY SSF51735 105 290 3.66E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1523 43b356e17b42552efa73a2be8e95ac18 320 Gene3D G3DSA:3.40.50.720 20 317 5.5E-115 T 13-10-2018 Thivi_3467 58b6298d6ecebdb9b89777a8aca14392 88 Pfam PF04380 Membrane fusogenic activity 1 78 1.3E-28 T 13-10-2018 IPR007475 Membrane fusogenic activity Thivi_3528 5007385b4c7c96425863ce1caabe88ea 180 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 14 177 5.5E-13 T 13-10-2018 IPR006522 Phage virion morphogensis protein Thivi_3528 5007385b4c7c96425863ce1caabe88ea 180 Pfam PF05069 Phage virion morphogenesis family 15 177 8.1E-21 T 13-10-2018 IPR006522 Phage virion morphogensis protein Thivi_0981 66a0e72736646a299db49f290b24aefa 654 SUPERFAMILY SSF51206 111 238 1.23E-23 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0981 66a0e72736646a299db49f290b24aefa 654 SUPERFAMILY SSF51206 295 413 3.14E-24 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0981 66a0e72736646a299db49f290b24aefa 654 SMART SM00100 301 420 9.8E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0981 66a0e72736646a299db49f290b24aefa 654 SMART SM00100 124 243 1.3E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0981 66a0e72736646a299db49f290b24aefa 654 Pfam PF00027 Cyclic nucleotide-binding domain 143 224 5.4E-19 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0981 66a0e72736646a299db49f290b24aefa 654 Pfam PF00027 Cyclic nucleotide-binding domain 321 403 1.2E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0981 66a0e72736646a299db49f290b24aefa 654 Gene3D G3DSA:2.60.120.10 100 248 4.1E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0981 66a0e72736646a299db49f290b24aefa 654 Gene3D G3DSA:2.60.120.10 284 420 2.4E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 Gene3D G3DSA:3.40.50.300 35 273 1.8E-46 T 13-10-2018 Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 Pfam PF00005 ABC transporter 46 177 1.7E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 SMART SM00382 55 228 2.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 Pfam PF14524 Wzt C-terminal domain 263 384 5.5E-10 T 13-10-2018 IPR029439 Wzt, C-terminal Thivi_4038 1c131965390f69b0c3b97a68bc1afd2b 418 SUPERFAMILY SSF52540 43 238 3.52E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 Gene3D G3DSA:3.40.50.300 105 357 1.3E-86 T 13-10-2018 Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 Gene3D G3DSA:3.30.450.90 1 103 5.9E-28 T 13-10-2018 Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 SMART SM00382 126 251 1.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 SUPERFAMILY SSF52540 8 342 7.28E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 Pfam PF00437 Type II/IV secretion system protein 74 274 6.1E-35 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_3316 f0129b5a5c87fd24ce8c4dcaee20dcb5 385 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 348 8.0E-134 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 Pfam PF01227 GTP cyclohydrolase I 34 209 3.9E-78 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 28 210 39.581 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 89 105 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 SUPERFAMILY SSF55620 19 210 1.7E-81 T 13-10-2018 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 Gene3D G3DSA:1.10.286.10 30 78 2.3E-19 T 13-10-2018 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 35 210 4.4E-78 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Thivi_0994 8e680325ec334b9d96fe2c302ad5d91a 211 Gene3D G3DSA:3.30.1130.10 80 211 8.4E-65 T 13-10-2018 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 Pfam PF01063 Amino-transferase class IV 37 268 1.4E-53 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 SUPERFAMILY SSF56752 3 304 6.28E-104 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 195 223 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 Gene3D G3DSA:3.30.470.10 1 130 1.4E-40 T 13-10-2018 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 Gene3D G3DSA:3.20.10.10 131 296 3.8E-55 T 13-10-2018 Thivi_0737 8e1bb565a3522ba1071fc4a0c0a74de7 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 12 307 5.4E-132 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 Gene3D G3DSA:3.10.400.10 1 193 6.4E-62 T 13-10-2018 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 Pfam PF01747 ATP-sulfurylase 178 389 7.4E-74 T 13-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 Gene3D G3DSA:3.40.50.620 194 395 7.5E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 SUPERFAMILY SSF88697 1 172 8.75E-43 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 Pfam PF14306 PUA-like domain 2 165 6.0E-35 T 13-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 27 393 46.14 T 13-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 SUPERFAMILY SSF52374 175 393 3.26E-77 T 13-10-2018 Thivi_0893 f515e31570e99ac3dab39e25eb23249b 395 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 4 389 1.1E-127 T 13-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 Pfam PF00271 Helicase conserved C-terminal domain 365 463 1.9E-10 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 Gene3D G3DSA:3.40.960.10 15 122 1.8E-7 T 13-10-2018 Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 SUPERFAMILY SSF52540 190 480 5.25E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 Pfam PF04851 Type III restriction enzyme, res subunit 144 290 3.7E-26 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 SMART SM00490 384 465 3.1E-8 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 SMART SM00487 142 322 5.7E-24 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 Gene3D G3DSA:3.40.50.300 131 305 2.9E-36 T 13-10-2018 Thivi_0827 e72d924008d3472e4b1deff3127dc7b5 762 Gene3D G3DSA:3.40.50.300 308 492 8.7E-39 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Gene3D G3DSA:1.10.287.130 494 575 1.9E-22 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SUPERFAMILY SSF52172 783 901 3.42E-30 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SUPERFAMILY SSF47384 490 573 1.04E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Pfam PF00072 Response regulator receiver domain 786 896 2.0E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SMART SM00388 504 572 8.0E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Gene3D G3DSA:1.20.1480.50 398 493 1.7E-12 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SMART SM00304 437 489 2.2E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Gene3D G3DSA:3.30.450.20 245 397 1.2E-27 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Pfam PF00672 HAMP domain 437 485 4.7E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Pfam PF00512 His Kinase A (phospho-acceptor) domain 505 571 3.7E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SMART SM00448 784 896 7.0E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SMART SM00387 618 737 1.0E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Gene3D G3DSA:3.30.565.10 577 744 3.2E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Pfam PF02743 Cache domain 61 377 2.8E-17 T 13-10-2018 IPR033479 Double Cache domain 1 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 669 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Gene3D G3DSA:3.40.50.12740 784 903 3.2E-31 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 734 4.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SUPERFAMILY SSF158472 437 487 7.32E-10 T 13-10-2018 Thivi_4303 8ee94daa82142f7fcd0dd6774eb4efc3 903 SUPERFAMILY SSF55874 562 736 3.01E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2656 937283409a13ec1319b7901aaddfdb21 203 Pfam PF00665 Integrase core domain 109 182 3.7E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_2656 937283409a13ec1319b7901aaddfdb21 203 Pfam PF13276 HTH-like domain 32 84 2.2E-12 T 13-10-2018 IPR025948 HTH-like domain Thivi_2656 937283409a13ec1319b7901aaddfdb21 203 SUPERFAMILY SSF53098 101 182 8.16E-22 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2656 937283409a13ec1319b7901aaddfdb21 203 Gene3D G3DSA:3.30.420.10 100 187 5.2E-6 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_0497 2110278b386f60b77b059867b460e858 145 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 57 94 0.002 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0497 2110278b386f60b77b059867b460e858 145 SUPERFAMILY SSF143243 9 95 7.98E-13 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0497 2110278b386f60b77b059867b460e858 145 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 13 94 1.3E-7 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0497 2110278b386f60b77b059867b460e858 145 Gene3D G3DSA:3.30.460.80 3 95 4.5E-6 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SUPERFAMILY SSF53335 264 461 3.1E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 Pfam PF14559 Tetratricopeptide repeat 149 194 1.3E-9 T 13-10-2018 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 Gene3D G3DSA:3.40.50.150 261 444 2.7E-27 T 13-10-2018 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 Pfam PF13428 Tetratricopeptide repeat 209 246 2.3E-6 T 13-10-2018 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 Pfam PF13489 Methyltransferase domain 282 438 1.8E-16 T 13-10-2018 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 Gene3D G3DSA:1.25.40.10 18 260 9.7E-52 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SUPERFAMILY SSF48452 30 202 2.65E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 34 67 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 68 101 55.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 136 169 3.2E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 102 135 21.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 204 237 39.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2496 57ec5d2f80431776d8936e9eddeb6ad6 463 SMART SM00028 170 203 0.015 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR02019 Aquaporin-7 signature 144 153 1.6E-6 T 13-10-2018 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR02019 Aquaporin-7 signature 82 91 1.6E-6 T 13-10-2018 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR02019 Aquaporin-7 signature 228 239 1.6E-6 T 13-10-2018 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR02019 Aquaporin-7 signature 38 50 1.6E-6 T 13-10-2018 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 TIGRFAM TIGR00861 MIP: MIP family channel proteins 9 236 8.6E-56 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 Gene3D G3DSA:1.20.1080.10 2 243 3.7E-76 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 SUPERFAMILY SSF81338 3 239 3.14E-65 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 Pfam PF00230 Major intrinsic protein 5 236 4.1E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 ProSitePatterns PS00221 MIP family signature. 63 71 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 219 239 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 82 101 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 5 24 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 45 69 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 176 198 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_2694 31efc1ff2ce8b95c9d9f50a487ad0241 244 PRINTS PR00783 Major intrinsic protein family signature 146 164 2.4E-51 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Pfam PF00890 FAD binding domain 9 404 7.9E-115 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Gene3D G3DSA:3.90.700.10 246 349 1.8E-164 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Gene3D G3DSA:3.50.50.60 9 415 1.8E-164 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 PIRSF PIRSF000171 1 579 2.6E-49 T 13-10-2018 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 587 9.8E-264 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Gene3D G3DSA:4.10.80.40 547 587 3.8E-10 T 13-10-2018 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 SUPERFAMILY SSF46977 451 587 9.42E-49 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 SUPERFAMILY SSF56425 236 354 2.84E-41 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 587 2.1E-39 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 SUPERFAMILY SSF51905 4 436 1.52E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 Gene3D G3DSA:1.20.58.100 431 546 5.6E-36 T 13-10-2018 Thivi_4349 57f111643b2183b4420074c1739ec0fe 587 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 587 5.4E-237 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4253 f7deb4893fac93959bb59b2c54257469 347 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 20 347 3.6E-152 T 13-10-2018 IPR017469 PEP-CTERM system-associated, FemAB-related Thivi_4253 f7deb4893fac93959bb59b2c54257469 347 Gene3D G3DSA:3.40.630.30 142 293 2.0E-18 T 13-10-2018 Thivi_4253 f7deb4893fac93959bb59b2c54257469 347 Pfam PF13480 Acetyltransferase (GNAT) domain 171 289 1.4E-17 T 13-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Thivi_4253 f7deb4893fac93959bb59b2c54257469 347 SUPERFAMILY SSF55729 14 76 2.18E-5 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4253 f7deb4893fac93959bb59b2c54257469 347 SUPERFAMILY SSF55729 146 308 5.31E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4387 505f9bb35c6cf72c0763385668f00c13 227 Gene3D G3DSA:1.10.260.40 8 73 6.2E-9 T 13-10-2018 Thivi_4387 505f9bb35c6cf72c0763385668f00c13 227 SUPERFAMILY SSF51306 93 222 6.93E-25 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_4387 505f9bb35c6cf72c0763385668f00c13 227 Pfam PF00717 Peptidase S24-like 142 207 7.5E-12 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Thivi_4387 505f9bb35c6cf72c0763385668f00c13 227 SUPERFAMILY SSF47413 4 70 3.66E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_4387 505f9bb35c6cf72c0763385668f00c13 227 Gene3D G3DSA:2.10.109.10 101 224 8.3E-12 T 13-10-2018 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 29 43 7.7E-17 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 203 223 7.7E-17 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 180 198 7.7E-17 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 160 177 7.7E-17 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 Gene3D G3DSA:3.40.50.150 101 239 3.2E-22 T 13-10-2018 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 Pfam PF01555 DNA methylase 152 217 7.0E-16 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 SUPERFAMILY SSF53335 9 223 5.77E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3526 e9c6c3f6d888964526a933443210bb8f 260 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 33 39 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_3253 45403fdab07461fddb7557d85db8687f 245 Pfam PF00005 ABC transporter 21 164 2.4E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3253 45403fdab07461fddb7557d85db8687f 245 SUPERFAMILY SSF52540 5 230 7.56E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3253 45403fdab07461fddb7557d85db8687f 245 Gene3D G3DSA:3.40.50.300 4 241 1.1E-48 T 13-10-2018 Thivi_3253 45403fdab07461fddb7557d85db8687f 245 SMART SM00382 29 217 2.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 SUPERFAMILY SSF52540 299 722 1.45E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 SUPERFAMILY SSF52540 231 476 1.76E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 Pfam PF11867 Domain of unknown function (DUF3387) 741 1051 1.9E-43 T 13-10-2018 IPR021810 Protein of unknown function DUF3387 Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 Gene3D G3DSA:3.90.1570.50 113 264 4.9E-20 T 13-10-2018 Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 SMART SM00487 268 474 1.4E-6 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 10 216 1.7E-38 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 17 735 6.2E-146 T 13-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 Gene3D G3DSA:3.40.50.300 271 455 2.7E-48 T 13-10-2018 Thivi_0591 e396a8e526797d148d77f5f48d354d54 1079 Pfam PF04851 Type III restriction enzyme, res subunit 292 435 2.6E-16 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 Gene3D G3DSA:3.10.20.30 4 116 3.7E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 13 120 1.6E-27 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 Pfam PF13183 4Fe-4S dicluster domain 158 231 2.3E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 Gene3D G3DSA:1.10.1060.10 118 253 1.2E-29 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 160 171 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 SUPERFAMILY SSF46548 117 241 5.06E-23 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 16 239 1.5E-39 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2776 f7222e339e96f69d0c78e454f4c495d9 255 SUPERFAMILY SSF54292 9 116 4.84E-22 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_2158 ec83f57ee9a8ac8dad82c85d685180ae 259 Pfam PF01738 Dienelactone hydrolase family 38 256 4.2E-45 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Thivi_2158 ec83f57ee9a8ac8dad82c85d685180ae 259 SUPERFAMILY SSF53474 26 256 9.51E-42 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2158 ec83f57ee9a8ac8dad82c85d685180ae 259 Gene3D G3DSA:3.40.50.1820 12 258 1.4E-67 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 Pfam PF01464 Transglycosylase SLT domain 489 593 2.0E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 414 477 8.5E-22 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 Gene3D G3DSA:1.10.1240.20 409 477 3.3E-5 T 13-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 Gene3D G3DSA:1.10.530.10 479 635 5.1E-44 T 13-10-2018 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 SUPERFAMILY SSF48435 37 482 2.22E-109 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 Gene3D G3DSA:1.25.20.10 35 392 2.0E-103 T 13-10-2018 Thivi_4552 48091d3d1074d32ab3eac83ae1935df0 657 SUPERFAMILY SSF53955 485 638 2.59E-40 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_2451 7ea1e2dfddfc50356250abc1298e330c 185 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 63 177 2.8E-23 T 13-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Thivi_2451 7ea1e2dfddfc50356250abc1298e330c 185 Pfam PF13975 gag-polyprotein putative aspartyl protease 77 164 5.6E-22 T 13-10-2018 Thivi_2451 7ea1e2dfddfc50356250abc1298e330c 185 SUPERFAMILY SSF50630 70 169 1.17E-13 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_2451 7ea1e2dfddfc50356250abc1298e330c 185 Gene3D G3DSA:2.40.70.10 60 178 2.0E-25 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_0158 016cf0f09c8ee818e05d54c0f8b7b9cf 172 Pfam PF06271 RDD family 23 152 2.3E-24 T 13-10-2018 IPR010432 RDD Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 SMART SM00387 428 534 2.5E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 SUPERFAMILY SSF47384 315 383 4.51E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 Gene3D G3DSA:1.10.287.130 307 385 6.1E-14 T 13-10-2018 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 1.9E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 1.9E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 532 2.0E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 Pfam PF00512 His Kinase A (phospho-acceptor) domain 321 383 6.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 SMART SM00388 320 387 1.1E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 Gene3D G3DSA:3.30.565.10 391 535 2.2E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4454 f00aa7181da361d4fcca46273b1aa441 536 SUPERFAMILY SSF55874 378 532 1.83E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 Gene3D G3DSA:3.40.50.150 1 217 1.6E-65 T 13-10-2018 Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 215 6.5E-83 T 13-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 40.334 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 PIRSF PIRSF023956 1 218 2.5E-77 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 SUPERFAMILY SSF53335 1 215 3.46E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3116 d0a990ed51b9cfc7415a7bcea7aade62 219 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 215 4.9E-73 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_1934 70376d6f489b5167363b9c7c720654f7 346 Pfam PF03116 NQR2, RnfD, RnfE family 5 340 6.0E-105 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Thivi_1934 70376d6f489b5167363b9c7c720654f7 346 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 342 26.356 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_1934 70376d6f489b5167363b9c7c720654f7 346 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 341 2.3E-124 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_0499 74e20283577a5b3425a6574c6bcb7ab5 116 Pfam PF13187 4Fe-4S dicluster domain 44 91 1.0E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0499 74e20283577a5b3425a6574c6bcb7ab5 116 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 45 56 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0499 74e20283577a5b3425a6574c6bcb7ab5 116 Gene3D G3DSA:3.30.70.20 40 94 6.8E-9 T 13-10-2018 Thivi_0499 74e20283577a5b3425a6574c6bcb7ab5 116 SUPERFAMILY SSF54862 25 92 9.77E-14 T 13-10-2018 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Gene3D G3DSA:3.30.300.10 12 278 3.8E-168 T 13-10-2018 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 122 239 3.7E-45 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 55.642 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 241 383 4.4E-65 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 SUPERFAMILY SSF55973 119 240 2.09E-49 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Gene3D G3DSA:3.30.300.10 109 386 3.8E-168 T 13-10-2018 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 123 133 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 PIRSF PIRSF000497 1 395 1.1E-167 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Gene3D G3DSA:3.30.300.10 6 241 3.8E-168 T 13-10-2018 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 SUPERFAMILY SSF55973 4 116 5.49E-41 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 SUPERFAMILY SSF55973 241 395 7.46E-66 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 267 275 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 393 6.4E-177 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_2350 16b76a282c2515a1c0ffd0e64c666edd 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 107 3.7E-38 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Thivi_0511 3cc71107b31d79523ff45913d59a323f 196 Pfam PF13649 Methyltransferase domain 54 137 3.1E-7 T 13-10-2018 Thivi_0511 3cc71107b31d79523ff45913d59a323f 196 Gene3D G3DSA:3.40.50.150 2 187 3.5E-13 T 13-10-2018 Thivi_0511 3cc71107b31d79523ff45913d59a323f 196 SUPERFAMILY SSF53335 14 137 2.76E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 37 2.3E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 8.2E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 Pfam PF12019 Type II transport protein GspH 53 138 1.4E-5 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 SUPERFAMILY SSF54523 18 145 2.43E-12 T 13-10-2018 Thivi_2872 4aba7a36d75f9f343fe1d1d2908f6d3e 160 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 14 149 6.3E-18 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 314 3.0E-92 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 Gene3D G3DSA:3.20.20.70 1 321 9.1E-134 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 Hamap MF_00492 Transaldolase [tal]. 1 320 49.421 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 TIGRFAM TIGR00874 talAB: transaldolase 3 317 1.4E-144 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Thivi_2932 01a543826d18ebd21caa726f56c32f84 323 SUPERFAMILY SSF51569 1 315 8.9E-108 T 13-10-2018 Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 Pfam PF00271 Helicase conserved C-terminal domain 226 325 3.4E-9 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 SMART SM00490 245 326 1.8E-10 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 Pfam PF04851 Type III restriction enzyme, res subunit 2 146 2.3E-20 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 Gene3D G3DSA:3.40.50.300 167 373 4.9E-30 T 13-10-2018 Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 SUPERFAMILY SSF52540 50 337 4.17E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 Gene3D G3DSA:3.40.50.300 1 131 1.3E-24 T 13-10-2018 Thivi_4611 ca988e52c1e572e4ed1b4b325d1d7f45 498 SMART SM00487 1 169 3.6E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 155 46.218 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 SUPERFAMILY SSF55248 183 266 7.72E-25 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 SUPERFAMILY SSF53927 8 156 4.02E-54 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 Gene3D G3DSA:3.30.1360.20 177 271 1.3E-23 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 178 264 8.4E-25 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 Gene3D G3DSA:3.40.140.10 4 167 6.0E-62 T 13-10-2018 Thivi_2275 e8a8a3e2706ec9c75b2bdb3f305af7eb 291 Pfam PF14437 MafB19-like deaminase 8 155 1.8E-29 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 356 44.545 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 SUPERFAMILY SSF101790 272 358 2.62E-25 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 SUPERFAMILY SSF103025 4 275 8.48E-90 T 13-10-2018 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 PIRSF PIRSF006487 1 361 7.6E-81 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 5.1E-84 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 351 1.3E-18 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Gene3D G3DSA:3.30.1360.120 6 231 2.3E-82 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Gene3D G3DSA:2.40.30.110 278 364 1.7E-28 T 13-10-2018 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Gene3D G3DSA:4.10.1250.10 232 276 1.0E-23 T 13-10-2018 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 355 2.1E-127 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Thivi_1838 72bc276ea81b7e912cc67b2b105af8c9 365 Gene3D G3DSA:3.30.70.1400 51 139 2.3E-82 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.40.50.300 1252 1494 1.8E-63 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.40.50.300 1508 1840 3.2E-125 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SUPERFAMILY SSF52540 991 1462 2.52E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SUPERFAMILY SSF52540 627 929 2.62E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 ProSitePatterns PS00211 ABC transporters family signature. 1729 1743 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.30.190.20 131 227 4.4E-213 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.30.190.20 1112 1235 8.2E-22 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:1.20.1580.10 700 844 4.0E-126 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SMART SM00382 1009 1457 1.4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SMART SM00382 640 962 0.92 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SMART SM00382 1524 1812 9.1E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.40.50.300 621 955 4.0E-126 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 ProSitePatterns PS00211 ABC transporters family signature. 1380 1394 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 ProSitePatterns PS00211 ABC transporters family signature. 844 858 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:1.20.1580.10 1591 1729 3.2E-125 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:1.10.8.280 277 379 4.4E-213 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.40.50.300 978 1099 1.2E-24 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:1.20.1580.10 91 499 4.4E-213 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 944 8.6E-278 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SUPERFAMILY SSF52540 1505 1819 5.07E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 Gene3D G3DSA:3.40.50.300 7 602 4.4E-213 T 13-10-2018 Thivi_0512 b9a86038b6f2a7aa9c8d9e3121a61927 1851 SUPERFAMILY SSF52540 6 576 3.93E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0813 05598a4ecf63fd7e59c0fa215d2b6375 401 Pfam PF02687 FtsX-like permease family 307 394 1.0E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_0813 05598a4ecf63fd7e59c0fa215d2b6375 401 Pfam PF12704 MacB-like periplasmic core domain 20 240 4.4E-45 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_0951 b7c8d0e7ebf0dd1c15748cedaaaf8d54 274 SUPERFAMILY SSF53800 1 270 2.29E-19 T 13-10-2018 Thivi_0951 b7c8d0e7ebf0dd1c15748cedaaaf8d54 274 Gene3D G3DSA:3.40.50.1400 141 272 8.9E-19 T 13-10-2018 Thivi_0951 b7c8d0e7ebf0dd1c15748cedaaaf8d54 274 Gene3D G3DSA:3.40.50.1400 1 135 2.6E-18 T 13-10-2018 Thivi_0951 b7c8d0e7ebf0dd1c15748cedaaaf8d54 274 Pfam PF01903 CbiX 150 265 3.9E-6 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 Pfam PF00239 Resolvase, N terminal domain 5 157 4.1E-23 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 Pfam PF02796 Helix-turn-helix domain of resolvase 159 199 8.8E-7 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 Gene3D G3DSA:3.40.50.1390 2 167 7.4E-27 T 13-10-2018 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 SUPERFAMILY SSF53041 4 157 8.76E-27 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Thivi_3945 08ca728ceb8e67e57bd55a6e24806938 205 SMART SM00857 4 157 3.2E-26 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 SUPERFAMILY SSF52518 392 587 4.37E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 25 191 1.9E-58 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Gene3D G3DSA:3.40.50.1220 210 380 5.3E-61 T 13-10-2018 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Gene3D G3DSA:3.40.50.970 18 199 2.0E-73 T 13-10-2018 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 SUPERFAMILY SSF52518 21 203 1.44E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Gene3D G3DSA:3.40.50.970 384 594 3.3E-66 T 13-10-2018 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 563 1.2E-49 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 216 350 7.3E-45 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 24 585 1.5E-261 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Thivi_1004 2ea94b01113734632a4f94299041bf0c 596 SUPERFAMILY SSF52467 209 381 5.4E-65 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 14 312 3.7E-117 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 Pfam PF04055 Radical SAM superfamily 51 208 2.4E-12 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 SUPERFAMILY SSF102114 21 278 1.83E-50 T 13-10-2018 Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 SMART SM00729 31 258 4.6E-43 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 Gene3D G3DSA:3.80.30.20 49 242 4.1E-14 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1262 c7b31a5b63c45b286fe48c0cd73392e9 324 Pfam PF16199 Radical_SAM C-terminal domain 220 301 1.0E-25 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Thivi_2800 991613b9c69e7fc229d409490865e769 233 SUPERFAMILY SSF49879 3 93 8.99E-25 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_2800 991613b9c69e7fc229d409490865e769 233 Pfam PF00498 FHA domain 24 85 1.1E-16 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2800 991613b9c69e7fc229d409490865e769 233 Gene3D G3DSA:2.60.200.20 143 232 6.3E-6 T 13-10-2018 Thivi_2800 991613b9c69e7fc229d409490865e769 233 Gene3D G3DSA:2.60.200.20 1 97 1.0E-23 T 13-10-2018 Thivi_2800 991613b9c69e7fc229d409490865e769 233 SMART SM00240 22 72 2.8E-14 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2800 991613b9c69e7fc229d409490865e769 233 SUPERFAMILY SSF49879 150 229 1.61E-8 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_0296 02c9b4357548b98049aff2c38ded53c9 488 Pfam PF00149 Calcineurin-like phosphoesterase 211 409 8.2E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_0296 02c9b4357548b98049aff2c38ded53c9 488 Gene3D G3DSA:3.60.21.10 198 424 3.1E-22 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_0296 02c9b4357548b98049aff2c38ded53c9 488 SUPERFAMILY SSF56300 170 418 2.28E-24 T 13-10-2018 Thivi_1452 2817cf7603d4e4158650f1f043799660 1290 SUPERFAMILY SSF53955 1134 1263 1.44E-15 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_1452 2817cf7603d4e4158650f1f043799660 1290 Gene3D G3DSA:1.10.530.10 1130 1272 3.1E-10 T 13-10-2018 Thivi_1452 2817cf7603d4e4158650f1f043799660 1290 Pfam PF07916 TraG-like protein, N-terminal region 3 459 7.1E-104 T 13-10-2018 IPR012931 TraG-like, N-terminal Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 Pfam PF00814 Glycoprotease family 24 311 7.7E-98 T 13-10-2018 IPR000905 Gcp-like domain Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.9E-51 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 4.1E-115 T 13-10-2018 IPR017861 Kae1/TsaD family Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.353 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 Gene3D G3DSA:3.30.420.40 129 297 1.4E-125 T 13-10-2018 Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 SUPERFAMILY SSF53067 1 314 2.75E-40 T 13-10-2018 Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 Gene3D G3DSA:3.30.420.40 3 319 1.4E-125 T 13-10-2018 Thivi_4080 2a79c2fe82ca5cfa07569391aba8b409 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 7.3E-129 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Thivi_0643 efe9843de8963245442d460272214f2b 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0643 efe9843de8963245442d460272214f2b 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0643 efe9843de8963245442d460272214f2b 557 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.6E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0643 efe9843de8963245442d460272214f2b 557 SUPERFAMILY SSF58104 249 557 4.45E-73 T 13-10-2018 Thivi_0643 efe9843de8963245442d460272214f2b 557 SMART SM00283 295 556 4.9E-77 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0643 efe9843de8963245442d460272214f2b 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 522 8.9E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0643 efe9843de8963245442d460272214f2b 557 Gene3D G3DSA:1.10.287.950 236 557 2.9E-73 T 13-10-2018 Thivi_0643 efe9843de8963245442d460272214f2b 557 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 131 1.2E-8 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_2408 fdf5427ea31b69f92adfc6db7ce0030d 1243 TIGRFAM TIGR02025 BchH: magnesium chelatase, H subunit 21 765 3.6E-275 T 13-10-2018 IPR011771 Magnesium-chelatase, subunit H GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2408 fdf5427ea31b69f92adfc6db7ce0030d 1243 Pfam PF02514 CobN/Magnesium Chelatase 184 1219 0.0 T 13-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Thivi_2408 fdf5427ea31b69f92adfc6db7ce0030d 1243 Pfam PF11965 Domain of unknown function (DUF3479) 21 180 3.0E-49 T 13-10-2018 IPR022571 Magnesium chelatase, subunit H, N-terminal GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Gene3D G3DSA:3.30.70.1450 366 469 1.0E-26 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 SUPERFAMILY SSF51735 231 375 3.35E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 SUPERFAMILY SSF116726 361 453 1.7E-6 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 SUPERFAMILY SSF51735 2 151 6.18E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Pfam PF02080 TrkA-C domain 389 462 8.4E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Pfam PF02080 TrkA-C domain 159 224 2.6E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Gene3D G3DSA:3.40.50.720 2 138 1.5E-41 T 13-10-2018 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.3E-21 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.3E-21 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.3E-21 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.3E-21 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.3E-21 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Gene3D G3DSA:3.30.70.1450 139 229 2.8E-20 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Pfam PF02254 TrkA-N domain 3 106 1.1E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Pfam PF02254 TrkA-N domain 234 349 1.4E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 Gene3D G3DSA:3.40.50.720 232 365 2.5E-34 T 13-10-2018 Thivi_0057 768255a7eaed19e43a67d706f2bf3d24 469 SUPERFAMILY SSF116726 136 222 2.35E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2057 82bb10f616875a3ad0bc8368634bb775 400 TIGRFAM TIGR00261 traB: TraB family protein 17 391 2.8E-85 T 13-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal Thivi_2057 82bb10f616875a3ad0bc8368634bb775 400 Pfam PF01963 TraB family 18 236 5.8E-24 T 13-10-2018 IPR002816 Pheromone shutdown, TraB Thivi_3156 bc31a652aa1a60c4300140b642aa7626 475 Gene3D G3DSA:3.60.120.10 63 474 5.8E-93 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_3156 bc31a652aa1a60c4300140b642aa7626 475 SUPERFAMILY SSF56322 62 473 1.19E-83 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_3156 bc31a652aa1a60c4300140b642aa7626 475 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 130 472 1.5E-81 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 Thivi_3156 bc31a652aa1a60c4300140b642aa7626 475 Pfam PF00425 chorismate binding enzyme 210 464 3.0E-64 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_2466 27f88861689ff777bc08645847fd69da 218 Gene3D G3DSA:1.10.10.10 101 215 1.8E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2466 27f88861689ff777bc08645847fd69da 218 SMART SM00421 147 204 3.6E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 Gene3D G3DSA:3.40.50.2300 1 100 6.2E-27 T 13-10-2018 Thivi_2466 27f88861689ff777bc08645847fd69da 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 6.3E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 SUPERFAMILY SSF46894 137 210 3.74E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_2466 27f88861689ff777bc08645847fd69da 218 Pfam PF00072 Response regulator receiver domain 3 112 2.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2466 27f88861689ff777bc08645847fd69da 218 SUPERFAMILY SSF52172 1 160 1.57E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2466 27f88861689ff777bc08645847fd69da 218 SMART SM00448 1 112 1.4E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2039 cf7b3a4466c86654e2109919ad9cc2c6 297 SMART SM00644 25 172 3.3E-19 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_2039 cf7b3a4466c86654e2109919ad9cc2c6 297 SUPERFAMILY SSF55846 28 185 2.88E-32 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_2039 cf7b3a4466c86654e2109919ad9cc2c6 297 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 172 6.7E-26 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_2039 cf7b3a4466c86654e2109919ad9cc2c6 297 Gene3D G3DSA:3.40.80.10 23 190 1.8E-32 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_3753 572fa46484334ac9d5d3a85bdd88d832 605 Gene3D G3DSA:3.40.50.12780 10 318 7.9E-56 T 13-10-2018 Thivi_3753 572fa46484334ac9d5d3a85bdd88d832 605 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_3753 572fa46484334ac9d5d3a85bdd88d832 605 Gene3D G3DSA:3.40.50.12780 328 469 3.1E-36 T 13-10-2018 Thivi_3753 572fa46484334ac9d5d3a85bdd88d832 605 SUPERFAMILY SSF56801 12 603 7.06E-119 T 13-10-2018 Thivi_3753 572fa46484334ac9d5d3a85bdd88d832 605 Pfam PF00501 AMP-binding enzyme 24 473 1.3E-94 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 Pfam PF00005 ABC transporter 371 520 3.4E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 Gene3D G3DSA:1.20.1560.10 27 344 6.4E-107 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 SUPERFAMILY SSF90123 22 343 3.14E-58 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 SMART SM00382 380 566 3.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 Pfam PF00664 ABC transporter transmembrane region 37 308 4.4E-34 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 SUPERFAMILY SSF52540 347 590 2.82E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2464 2eb9436dfeee1ffc3875544c0b24cde8 610 Gene3D G3DSA:3.40.50.300 346 598 1.5E-96 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SMART SM01049 53 147 2.3E-31 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 658 817 7.4E-36 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SUPERFAMILY SSF55785 312 426 1.01E-10 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SMART SM00283 598 831 8.3E-73 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Pfam PF17200 Single Cache domain 2 56 207 2.5E-42 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Gene3D G3DSA:3.30.450.20 54 200 2.2E-47 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SUPERFAMILY SSF158472 230 279 5.62E-10 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SUPERFAMILY SSF58104 566 832 1.96E-64 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Pfam PF00672 HAMP domain 230 279 1.8E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Gene3D G3DSA:1.20.1480.50 201 287 5.2E-14 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Gene3D G3DSA:1.10.287.950 544 832 6.1E-71 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Pfam PF08448 PAS fold 327 433 2.0E-12 T 13-10-2018 IPR013656 PAS fold-4 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 Gene3D G3DSA:3.30.450.20 310 450 2.1E-12 T 13-10-2018 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SMART SM00304 545 597 3.1 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4117 66f7777cfa32a7accc6e2f3f8b491278 876 SMART SM00304 230 282 1.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 SUPERFAMILY SSF53335 72 260 3.56E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PIRSF PIRSF000410 1 262 4.0E-75 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 262 1.9E-62 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 SUPERFAMILY SSF47757 2 71 9.68E-13 T 13-10-2018 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 102 122 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 26 39 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 5.9E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 55 9.8E-8 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 Gene3D G3DSA:3.40.50.150 71 266 5.4E-60 T 13-10-2018 Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 Gene3D G3DSA:1.10.155.10 1 70 1.4E-7 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0393 63e088a0c914ecc7dbb96d20049c2030 270 SMART SM00138 4 268 6.2E-91 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 Gene3D G3DSA:1.10.10.10 317 387 1.5E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 SUPERFAMILY SSF102405 87 292 4.43E-46 T 13-10-2018 Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 Pfam PF02481 DNA recombination-mediator protein A 80 286 8.6E-77 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 SUPERFAMILY SSF47781 9 60 4.13E-8 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 Gene3D G3DSA:3.40.50.450 5 299 1.5E-108 T 13-10-2018 Thivi_3200 fe9008528ebe45ce6b5ba639fa5c32c0 391 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 294 1.7E-76 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Thivi_1765 75fb615ab952d30e7d983cc4c703130c 286 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 11 258 8.3E-73 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Thivi_1765 75fb615ab952d30e7d983cc4c703130c 286 Pfam PF08241 Methyltransferase domain 47 142 2.1E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_1765 75fb615ab952d30e7d983cc4c703130c 286 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 2 259 32.197 T 13-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 Thivi_1765 75fb615ab952d30e7d983cc4c703130c 286 Gene3D G3DSA:3.40.50.150 10 255 1.1E-36 T 13-10-2018 Thivi_1765 75fb615ab952d30e7d983cc4c703130c 286 SUPERFAMILY SSF53335 8 247 4.65E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 Pfam PF02872 5'-nucleotidase, C-terminal domain 414 540 6.9E-13 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 ProSitePatterns PS00785 5'-nucleotidase signature 1. 44 56 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 Gene3D G3DSA:3.60.21.10 99 396 3.3E-78 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 SUPERFAMILY SSF55816 394 577 8.37E-28 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 Gene3D G3DSA:3.90.780.10 397 586 1.0E-68 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 PRINTS PR01607 Apyrase family signature 283 300 8.1E-13 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 PRINTS PR01607 Apyrase family signature 334 354 8.1E-13 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 PRINTS PR01607 Apyrase family signature 42 60 8.1E-13 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 PRINTS PR01607 Apyrase family signature 302 325 8.1E-13 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 579 4.7E-262 T 13-10-2018 IPR030998 Thiosulfohydrolase SoxB Thivi_2200 12211ab26941dbaa6ff1299d48616f3f 593 SUPERFAMILY SSF56300 38 395 1.99E-81 T 13-10-2018 Thivi_3883 7d4d8900c0fd3ae88207ed76c2389a14 256 Gene3D G3DSA:3.40.50.10090 43 166 6.2E-67 T 13-10-2018 Thivi_3883 7d4d8900c0fd3ae88207ed76c2389a14 256 Gene3D G3DSA:3.40.50.10090 13 240 6.2E-67 T 13-10-2018 Thivi_3883 7d4d8900c0fd3ae88207ed76c2389a14 256 SUPERFAMILY SSF69618 10 250 1.83E-48 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_3883 7d4d8900c0fd3ae88207ed76c2389a14 256 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 245 1.9E-40 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 410 1.3E-19 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 SUPERFAMILY SSF53623 101 319 3.01E-71 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Pfam PF01225 Mur ligase family, catalytic domain 18 116 2.1E-27 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Pfam PF08245 Mur ligase middle domain 120 301 2.8E-26 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Gene3D G3DSA:3.90.190.20 319 472 9.0E-43 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Gene3D G3DSA:3.40.50.720 16 103 2.4E-32 T 13-10-2018 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 SUPERFAMILY SSF53244 320 470 4.94E-43 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.037 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 SUPERFAMILY SSF51984 16 102 1.06E-28 T 13-10-2018 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 466 1.0E-165 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2318 4e485412ec7f63aa5451b3252fbc8b17 475 Gene3D G3DSA:3.40.1190.10 104 318 2.5E-78 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 Pfam PF00472 RF-1 domain 111 191 5.0E-24 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 Gene3D G3DSA:3.30.70.1660 8 189 5.1E-29 T 13-10-2018 Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 SUPERFAMILY SSF75620 5 202 1.96E-46 T 13-10-2018 Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 Gene3D G3DSA:3.30.160.20 105 185 5.1E-29 T 13-10-2018 Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 6 204 6.6E-70 T 13-10-2018 IPR017509 Putative peptide chain release factor H Thivi_0438 464f3bb0c8568032c42a3d8dc28d3ef7 211 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 121 137 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 25 432 3.3E-147 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Pfam PF07676 WD40-like Beta Propeller Repeat 287 321 1.2E-13 T 13-10-2018 IPR011659 WD40-like Beta Propeller Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Pfam PF07676 WD40-like Beta Propeller Repeat 246 277 4.9E-6 T 13-10-2018 IPR011659 WD40-like Beta Propeller Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Pfam PF07676 WD40-like Beta Propeller Repeat 376 402 0.12 T 13-10-2018 IPR011659 WD40-like Beta Propeller Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Pfam PF07676 WD40-like Beta Propeller Repeat 202 233 7.8E-7 T 13-10-2018 IPR011659 WD40-like Beta Propeller Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Gene3D G3DSA:2.120.10.30 169 436 1.7E-89 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 11 431 45.654 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 SUPERFAMILY SSF52964 35 165 2.75E-33 T 13-10-2018 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Pfam PF04052 TolB amino-terminal domain 30 133 8.2E-27 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 Gene3D G3DSA:3.40.50.10070 26 167 2.5E-37 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Thivi_1792 ac89c3f8e2823331308e5c5abdf701e8 436 SUPERFAMILY SSF69304 158 433 4.05E-59 T 13-10-2018 Thivi_2758 8deec41002be95e56ef454558cc92a8f 382 SUPERFAMILY SSF53756 3 374 2.47E-33 T 13-10-2018 Thivi_2758 8deec41002be95e56ef454558cc92a8f 382 Pfam PF02684 Lipid-A-disaccharide synthetase 5 371 2.8E-108 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Thivi_2758 8deec41002be95e56ef454558cc92a8f 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 2 374 3.2E-115 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Thivi_2758 8deec41002be95e56ef454558cc92a8f 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 378 39.442 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Thivi_3390 9d9ecc76e2318024bf81b372dd1fceb3 258 SUPERFAMILY SSF100950 50 243 2.09E-50 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Thivi_3390 9d9ecc76e2318024bf81b372dd1fceb3 258 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 50 237 2.8E-37 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Thivi_3390 9d9ecc76e2318024bf81b372dd1fceb3 258 Gene3D G3DSA:3.40.50.10420 49 245 1.3E-50 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Thivi_3390 9d9ecc76e2318024bf81b372dd1fceb3 258 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 50 237 6.4E-45 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 Pfam PF13365 Trypsin-like peptidase domain 90 225 1.5E-30 T 13-10-2018 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 SUPERFAMILY SSF50494 30 254 1.08E-59 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 Gene3D G3DSA:2.40.10.120 30 257 7.7E-77 T 13-10-2018 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 2.8E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 PRINTS PR00834 HtrA/DegQ protease family signature 161 185 2.8E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 PRINTS PR00834 HtrA/DegQ protease family signature 196 213 2.8E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 2.8E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1921 195ef6bd42f3b98ba2642dec84823a35 259 PRINTS PR00834 HtrA/DegQ protease family signature 218 235 2.8E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_0191 0561f95721dc7d28c78d7214ca5d815f 349 Gene3D G3DSA:3.30.700.10 25 142 1.6E-9 T 13-10-2018 Thivi_0191 0561f95721dc7d28c78d7214ca5d815f 349 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 44 3.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0191 0561f95721dc7d28c78d7214ca5d815f 349 SUPERFAMILY SSF54523 25 117 1.65E-10 T 13-10-2018 Thivi_0191 0561f95721dc7d28c78d7214ca5d815f 349 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 23 43 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0191 0561f95721dc7d28c78d7214ca5d815f 349 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 22 44 1.6E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0671 31f4bce10125c9d997273fea180483bc 178 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 11 157 6.5E-50 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 Gene3D G3DSA:3.30.420.10 11 162 2.2E-46 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 120 154 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 12 25 5.3E-32 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 114 133 5.3E-32 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 90 106 5.3E-32 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 145 157 5.3E-32 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 68 84 5.3E-32 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 11 161 1.8E-46 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_0671 31f4bce10125c9d997273fea180483bc 178 SUPERFAMILY SSF53098 10 163 2.17E-49 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0671 31f4bce10125c9d997273fea180483bc 178 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 9 160 43.467 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 SMART SM00954 256 366 6.4E-66 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 SUPERFAMILY SSF81271 397 467 1.05E-19 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Gene3D G3DSA:3.10.20.30 406 476 1.5E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_3687 da9f222bf345eed2b65f37125779869d 745 SUPERFAMILY SSF81301 213 384 1.18E-62 T 13-10-2018 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Pfam PF13291 ACT domain 666 743 5.3E-21 T 13-10-2018 IPR002912 ACT domain Thivi_3687 da9f222bf345eed2b65f37125779869d 745 SUPERFAMILY SSF55021 666 743 9.99E-15 T 13-10-2018 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Pfam PF04607 Region found in RelA / SpoT proteins 256 365 8.1E-37 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Pfam PF02824 TGS domain 408 467 5.0E-21 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Gene3D G3DSA:1.10.3210.10 14 212 2.2E-47 T 13-10-2018 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 SUPERFAMILY SSF109604 19 211 3.77E-43 T 13-10-2018 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Pfam PF13328 HD domain 41 197 5.9E-41 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_3687 da9f222bf345eed2b65f37125779869d 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 55 743 6.9E-193 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Gene3D G3DSA:3.30.460.10 214 346 8.5E-51 T 13-10-2018 Thivi_3687 da9f222bf345eed2b65f37125779869d 745 Gene3D G3DSA:3.30.70.260 665 745 2.4E-20 T 13-10-2018 Thivi_2554 d927bce2e52f3cd98bed107c5cd7c078 72 Pfam PF11127 Protein of unknown function (DUF2892) 7 65 3.5E-19 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 45.76 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 1.5E-44 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 SUPERFAMILY SSF55957 356 442 1.83E-23 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Gene3D G3DSA:3.40.120.10 2 151 3.1E-47 T 13-10-2018 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 1.3E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 1.3E-8 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Gene3D G3DSA:3.30.310.50 367 444 7.3E-25 T 13-10-2018 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 SUPERFAMILY SSF53738 153 253 2.79E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Gene3D G3DSA:3.40.120.10 172 359 1.5E-61 T 13-10-2018 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 362 1.1E-26 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 251 6.6E-17 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 439 3.9E-184 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 SUPERFAMILY SSF53738 2 178 8.24E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 438 3.6E-15 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 SUPERFAMILY SSF53738 255 362 7.06E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Thivi_0937 69fffb7bb41199a66e1ec5ec52a6eed2 444 Gene3D G3DSA:3.40.120.10 254 336 1.5E-61 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 SUPERFAMILY SSF88697 15 207 7.95E-50 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 15 207 1.8E-40 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PIRSF PIRSF001174 4 781 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 TIGRFAM TIGR00763 lon: endopeptidase La 17 777 1.4E-299 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 SUPERFAMILY SSF54211 601 777 3.07E-60 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Gene3D G3DSA:1.20.58.1480 127 251 2.6E-43 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Gene3D G3DSA:3.30.230.10 591 778 4.8E-83 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 SUPERFAMILY SSF52540 319 595 5.57E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Gene3D G3DSA:3.40.50.300 320 496 6.8E-63 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 SMART SM00382 354 498 2.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Gene3D G3DSA:1.10.8.60 497 590 7.8E-34 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Gene3D G3DSA:2.30.130.40 11 120 4.2E-32 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 682 690 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 358 495 7.5E-19 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 601 617 1.0E-55 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 732 750 1.0E-55 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 362 381 1.0E-55 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 709 728 1.0E-55 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 679 698 1.0E-55 T 13-10-2018 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 576 778 4.6E-98 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 Hamap MF_01973 Lon protease [lon]. 16 778 71.182 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Thivi_0630 f9fdb65a369f0096d8f967126415db4d 817 SMART SM00464 15 208 2.2E-75 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_2645 ecb4f8425361f38298f9880c4e344bb6 617 Pfam PF13362 Toprim domain 360 459 4.7E-8 T 13-10-2018 IPR006171 TOPRIM domain Thivi_2645 ecb4f8425361f38298f9880c4e344bb6 617 SUPERFAMILY SSF57783 127 212 2.89E-9 T 13-10-2018 Thivi_2645 ecb4f8425361f38298f9880c4e344bb6 617 Pfam PF08273 Zinc-binding domain of primase-helicase 146 176 1.9E-7 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Thivi_2645 ecb4f8425361f38298f9880c4e344bb6 617 SMART SM00778 144 183 9.5E-4 T 13-10-2018 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 Thivi_1754 da74109a9c76285342d6694dbd32f5a9 245 SMART SM01057 26 244 2.0E-95 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Thivi_1754 da74109a9c76285342d6694dbd32f5a9 245 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 115 131 - T 13-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 Thivi_1754 da74109a9c76285342d6694dbd32f5a9 245 SUPERFAMILY SSF51069 25 244 5.0E-73 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_1754 da74109a9c76285342d6694dbd32f5a9 245 Gene3D G3DSA:3.10.200.10 22 245 6.6E-78 T 13-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily Thivi_1754 da74109a9c76285342d6694dbd32f5a9 245 Pfam PF00194 Eukaryotic-type carbonic anhydrase 25 244 2.5E-44 T 13-10-2018 IPR001148 Alpha carbonic anhydrase domain Thivi_2481 7d0bfca537c4cb8df5e939734a41ed16 362 Pfam PF13439 Glycosyltransferase Family 4 14 159 5.2E-17 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_2481 7d0bfca537c4cb8df5e939734a41ed16 362 SUPERFAMILY SSF53756 2 357 3.14E-76 T 13-10-2018 Thivi_2481 7d0bfca537c4cb8df5e939734a41ed16 362 Gene3D G3DSA:3.40.50.2000 22 354 5.0E-63 T 13-10-2018 Thivi_2481 7d0bfca537c4cb8df5e939734a41ed16 362 Gene3D G3DSA:3.40.50.2000 158 341 5.0E-63 T 13-10-2018 Thivi_2481 7d0bfca537c4cb8df5e939734a41ed16 362 Pfam PF00534 Glycosyl transferases group 1 170 333 6.7E-30 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3417 9990529f4890b28f1fb8d3bffb47a655 150 Pfam PF00293 NUDIX domain 12 129 7.8E-21 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_3417 9990529f4890b28f1fb8d3bffb47a655 150 Gene3D G3DSA:3.90.79.10 3 135 5.2E-38 T 13-10-2018 Thivi_3417 9990529f4890b28f1fb8d3bffb47a655 150 SUPERFAMILY SSF55811 3 134 8.53E-28 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_3417 9990529f4890b28f1fb8d3bffb47a655 150 PRINTS PR00502 NUDIX hydrolase family signature 51 66 9.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_3417 9990529f4890b28f1fb8d3bffb47a655 150 PRINTS PR00502 NUDIX hydrolase family signature 37 51 9.4E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_3701 8253402a5ed2b092a72a63d3ab5dfe85 153 Pfam PF08269 Cache domain 66 152 2.7E-18 T 13-10-2018 IPR004010 Double Cache domain 2 Thivi_3701 8253402a5ed2b092a72a63d3ab5dfe85 153 Gene3D G3DSA:3.30.450.20 23 153 1.1E-24 T 13-10-2018 Thivi_3701 8253402a5ed2b092a72a63d3ab5dfe85 153 SMART SM01049 32 105 3.8E-8 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_1049 9d0e803be81cbbcaee4cc2ee10b697c6 117 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 94 4.6E-24 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Thivi_1049 9d0e803be81cbbcaee4cc2ee10b697c6 117 Pfam PF03334 Na+/H+ antiporter subunit 8 85 4.3E-24 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 SUPERFAMILY SSF48695 57 332 5.76E-44 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 250 286 1.1E-12 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 201 243 1.9E-13 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 159 193 5.5E-6 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 93 141 5.4E-5 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Gene3D G3DSA:1.10.1130.10 223 289 1.4E-5 T 13-10-2018 Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 Gene3D G3DSA:3.90.10.10 120 220 2.6E-6 T 13-10-2018 Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 61 333 5.2E-80 T 13-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 250 286 1.5E-11 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_3488 724aafdb7225ba1cc68ad01f0389af54 339 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 201 242 4.1E-10 T 13-10-2018 IPR010177 Doubled CXXCH motif Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 469 4.8E-31 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 313 329 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 294 312 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 217 243 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 269 293 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 187 201 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 PRINTS PR01050 Pyruvate kinase family signature 244 268 3.7E-57 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 SUPERFAMILY SSF52935 324 472 2.88E-36 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 Gene3D G3DSA:3.20.20.60 3 335 1.6E-158 T 13-10-2018 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 Gene3D G3DSA:3.40.1380.20 336 467 1.6E-158 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 SUPERFAMILY SSF50800 71 166 1.03E-23 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 SUPERFAMILY SSF51621 2 339 2.3E-91 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 Gene3D G3DSA:2.40.33.10 71 169 1.6E-158 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 1.6E-154 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_2343 d6032e72e6dacdb5aac2ee612f32f0a4 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 4.1E-116 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 Gene3D G3DSA:3.40.1280.10 80 246 2.2E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 245 3.2E-75 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 8 76 2.4E-16 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 Gene3D G3DSA:3.30.1330.30 2 77 2.1E-18 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 246 41.87 T 13-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 SUPERFAMILY SSF55315 3 76 1.41E-16 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 SUPERFAMILY SSF75217 70 246 1.18E-49 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 SMART SM00967 6 82 2.8E-11 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Thivi_0515 631097a82331daf71ecfc5d6d9601309 246 Pfam PF00588 SpoU rRNA Methylase family 99 239 6.8E-39 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Thivi_1809 035ec78743d04255397429771f29c855 248 Gene3D G3DSA:3.40.50.1010 4 145 1.8E-12 T 13-10-2018 Thivi_1809 035ec78743d04255397429771f29c855 248 Gene3D G3DSA:1.10.10.1880 170 242 3.2E-24 T 13-10-2018 Thivi_1809 035ec78743d04255397429771f29c855 248 Pfam PF12872 OST-HTH/LOTUS domain 166 231 3.7E-15 T 13-10-2018 IPR025605 OST-HTH/LOTUS domain Thivi_1809 035ec78743d04255397429771f29c855 248 Pfam PF01936 NYN domain 8 141 4.4E-31 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Pfam PF07660 Secretin and TonB N terminus short domain 335 379 1.5E-9 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 PRINTS PR00811 Bacterial general secretion pathway protein D signature 627 651 2.2E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 PRINTS PR00811 Bacterial general secretion pathway protein D signature 774 788 2.2E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 PRINTS PR00811 Bacterial general secretion pathway protein D signature 521 531 2.2E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 PRINTS PR00811 Bacterial general secretion pathway protein D signature 662 672 2.2E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 PRINTS PR00811 Bacterial general secretion pathway protein D signature 751 769 2.2E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Pfam PF11741 AMIN domain 60 142 4.4E-8 T 13-10-2018 IPR021731 AMIN domain Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 732 765 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Gene3D G3DSA:3.55.50.30 289 404 1.1E-40 T 13-10-2018 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 308 787 4.4E-154 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Pfam PF03958 Bacterial type II/III secretion system short domain 406 521 1.8E-15 T 13-10-2018 IPR005644 NolW-like Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Gene3D G3DSA:2.60.40.3500 38 145 2.7E-8 T 13-10-2018 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Gene3D G3DSA:2.60.40.3470 170 288 1.5E-29 T 13-10-2018 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 Pfam PF00263 Bacterial type II and III secretion system protein 631 787 1.8E-47 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Thivi_2856 9007d7dc4ba26c6dd990d8ae68ede60e 794 SMART SM00965 333 381 1.4E-10 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Thivi_3335 f826a9958fa52bc0495b05cdf6363e62 344 Pfam PF13511 Domain of unknown function (DUF4124) 41 74 2.3E-7 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 Gene3D G3DSA:3.40.50.10490 19 211 3.2E-62 T 13-10-2018 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 SMART SM00116 226 274 0.0094 T 13-10-2018 IPR000644 CBS domain Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 SMART SM00116 291 339 1.4 T 13-10-2018 IPR000644 CBS domain Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 61 330 4.1E-106 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 PIRSF PIRSF004692 10 340 2.8E-131 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 Pfam PF00571 CBS domain 217 274 1.4E-7 T 13-10-2018 IPR000644 CBS domain Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 Pfam PF00571 CBS domain 285 337 1.3E-7 T 13-10-2018 IPR000644 CBS domain Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 Pfam PF01380 SIS domain 56 188 4.0E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 SUPERFAMILY SSF53697 23 335 3.78E-66 T 13-10-2018 Thivi_2229 b75e81ebe163eb0f8031706652d89c1a 340 Gene3D G3DSA:3.10.580.10 212 337 1.1E-43 T 13-10-2018 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 Gene3D G3DSA:3.30.160.270 375 547 1.9E-45 T 13-10-2018 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 Pfam PF00682 HMGL-like 31 303 3.3E-69 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 SUPERFAMILY SSF89000 386 435 4.32E-12 T 13-10-2018 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 546 6.2E-23 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 548 2.9E-216 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 SUPERFAMILY SSF110921 449 546 2.35E-25 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 SMART SM00917 420 548 2.9E-25 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 3 549 51.307 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 Gene3D G3DSA:3.20.20.70 12 374 2.3E-147 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4590 cc4bb84ae72e1aa25a588e604f638fe0 556 SUPERFAMILY SSF51569 20 328 2.38E-96 T 13-10-2018 Thivi_0140 1fe5230a18ad974ea88bc6162e28a029 421 Gene3D G3DSA:3.30.1330.40 158 281 2.0E-7 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_0140 1fe5230a18ad974ea88bc6162e28a029 421 Gene3D G3DSA:3.30.1330.40 300 417 1.2E-20 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_0140 1fe5230a18ad974ea88bc6162e28a029 421 SUPERFAMILY SSF55298 314 414 1.45E-17 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_0140 1fe5230a18ad974ea88bc6162e28a029 421 Pfam PF01042 Endoribonuclease L-PSP 313 410 3.8E-7 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Gene3D G3DSA:3.30.420.340 378 550 1.9E-51 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SUPERFAMILY SSF82771 22 104 4.05E-21 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Gene3D G3DSA:1.10.150.20 553 607 1.0E-21 T 13-10-2018 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Pfam PF12826 Helix-hairpin-helix motif 558 609 7.5E-10 T 13-10-2018 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Hamap MF_00203 UvrABC system protein C [uvrC]. 9 605 28.874 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Gene3D G3DSA:3.40.1440.10 9 106 1.2E-31 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SUPERFAMILY SSF47781 518 609 6.99E-24 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 540 4.6E-53 T 13-10-2018 IPR001162 UvrC family homology region Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Pfam PF01541 GIY-YIG catalytic domain 23 96 1.2E-7 T 13-10-2018 IPR000305 GIY-YIG endonuclease Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 586 2.1E-185 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SMART SM00278 586 605 6.1 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SMART SM00278 554 573 82.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SUPERFAMILY SSF46600 194 247 2.48E-12 T 13-10-2018 IPR036876 UVR domain superfamily Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 SMART SM00465 22 102 6.7E-19 T 13-10-2018 IPR000305 GIY-YIG endonuclease Thivi_4365 8b23326c3ca7bb92db38c56d2d489c56 613 Pfam PF02151 UvrB/uvrC motif 208 242 1.7E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 SMART SM00704 182 214 1.0E-6 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 SMART SM00704 102 139 1.3E-8 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 Gene3D G3DSA:3.40.5.90 82 145 2.0E-13 T 13-10-2018 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 Gene3D G3DSA:3.40.5.90 153 216 4.8E-15 T 13-10-2018 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 Pfam PF06902 Divergent 4Fe-4S mono-cluster 9 72 8.1E-21 T 13-10-2018 IPR010693 Divergent 4Fe-4S mono-cluster Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 Pfam PF09360 Iron-binding zinc finger CDGSH type 90 133 5.8E-15 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Thivi_0204 e51c77d347c21319f598c20dc1b77e5e 216 Pfam PF09360 Iron-binding zinc finger CDGSH type 165 209 6.7E-14 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Thivi_2565 f2251bbc080e1647d9b4ba630419af1a 102 Pfam PF05433 Glycine zipper 2TM domain 32 70 1.4E-6 T 13-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 Gene3D G3DSA:3.30.70.141 1 137 2.0E-58 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 SMART SM00562 3 139 2.4E-83 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.8E-38 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 Pfam PF00334 Nucleoside diphosphate kinase 4 135 2.3E-55 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 141 34.6 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_2731 b6d13865a0bfa8d995b2ea2fdb68c462 142 SUPERFAMILY SSF54919 1 136 9.17E-58 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Thivi_3965 2e8705da3a1f1e6e724c90b9aac465ed 254 Pfam PF08241 Methyltransferase domain 87 131 1.2E-8 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_3965 2e8705da3a1f1e6e724c90b9aac465ed 254 SUPERFAMILY SSF53335 88 215 3.13E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3965 2e8705da3a1f1e6e724c90b9aac465ed 254 Gene3D G3DSA:3.40.50.150 56 189 3.1E-16 T 13-10-2018 Thivi_4561 3bb61e4564ba3049b86278ec63537edb 242 Gene3D G3DSA:3.40.50.150 9 192 1.1E-26 T 13-10-2018 Thivi_4561 3bb61e4564ba3049b86278ec63537edb 242 SUPERFAMILY SSF53335 16 204 1.38E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4561 3bb61e4564ba3049b86278ec63537edb 242 Pfam PF13649 Methyltransferase domain 36 130 1.7E-16 T 13-10-2018 Thivi_2198 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_2198 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_0150 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_0150 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_1310 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_1310 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_3490 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_3490 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_4161 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_4161 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_3481 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_3481 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_3851 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_3851 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_0055 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_0055 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_2008 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_2008 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_2097 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_2097 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_0583 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_0583 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_3509 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_3509 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_0999 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_0999 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_2098 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03811 InsA N-terminal domain 3 30 4.3E-6 T 13-10-2018 IPR003220 InsA N-terminal domain GO:0006313 Thivi_2098 0618e9e1f0e2392b9f4cb4ffbad4a2db 240 Pfam PF03400 IS1 transposase 101 228 1.2E-19 T 13-10-2018 IPR005063 Transposase, IS1 GO:0003677|GO:0004803|GO:0006313 Thivi_4604 28624dda867128b5af43ea9d0fd50589 169 Gene3D G3DSA:3.40.50.1010 2 122 1.4E-8 T 13-10-2018 Thivi_4604 28624dda867128b5af43ea9d0fd50589 169 SUPERFAMILY SSF88723 2 130 5.05E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_0231 47a97d288c633430ed58eb7893f52f24 640 PIRSF PIRSF000549 1 640 8.7E-284 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Thivi_0231 47a97d288c633430ed58eb7893f52f24 640 SUPERFAMILY SSF52540 75 364 3.18E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0231 47a97d288c633430ed58eb7893f52f24 640 Pfam PF08298 PrkA AAA domain 20 376 5.4E-171 T 13-10-2018 IPR013153 PrkA AAA domain Thivi_0231 47a97d288c633430ed58eb7893f52f24 640 SMART SM00763 19 376 1.6E-210 T 13-10-2018 IPR013153 PrkA AAA domain Thivi_0231 47a97d288c633430ed58eb7893f52f24 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.2E-71 T 13-10-2018 IPR010650 PrkA C-terminal domain Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 18 348 4.2E-142 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 PIRSF PIRSF005644 13 348 7.1E-127 T 13-10-2018 IPR011854 Carbamoyl dehydratase HypE Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 Gene3D G3DSA:3.30.1330.10 19 166 3.3E-50 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 Gene3D G3DSA:3.90.650.10 167 348 3.7E-57 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 162 3.6E-17 T 13-10-2018 IPR016188 PurM-like, N-terminal domain Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 SUPERFAMILY SSF55326 20 167 1.27E-34 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 321 4.0E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Thivi_3700 6a7dae8f41a28b18089ea675d5abbccc 348 SUPERFAMILY SSF56042 168 344 4.93E-47 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_1513 1a58123fd4c006b8d90167c1a09aebd5 78 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 11 65 2.7E-16 T 13-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Thivi_1513 1a58123fd4c006b8d90167c1a09aebd5 78 SUPERFAMILY SSF143011 12 64 5.1E-8 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1513 1a58123fd4c006b8d90167c1a09aebd5 78 Gene3D G3DSA:3.30.2310.20 9 66 3.3E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 Gene3D G3DSA:3.40.50.300 93 265 5.3E-45 T 13-10-2018 Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 Gene3D G3DSA:1.10.40.50 268 340 1.4E-18 T 13-10-2018 Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 28 329 29.21 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 SUPERFAMILY SSF52540 109 328 3.58E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 Pfam PF03193 RsgA GTPase 90 265 7.5E-44 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Thivi_1656 d6daf8333d34b3cc9db3c8514b19dca1 357 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 70 322 3.2E-49 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Thivi_4550 b18aa52400d90bdb15f142b7cf6cc00c 392 Pfam PF01435 Peptidase family M48 71 146 5.3E-8 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Thivi_4550 b18aa52400d90bdb15f142b7cf6cc00c 392 Gene3D G3DSA:3.30.700.10 270 392 2.8E-19 T 13-10-2018 Thivi_4550 b18aa52400d90bdb15f142b7cf6cc00c 392 SUPERFAMILY SSF54523 271 374 2.09E-12 T 13-10-2018 Thivi_4550 b18aa52400d90bdb15f142b7cf6cc00c 392 Pfam PF01435 Peptidase family M48 160 241 2.0E-4 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Thivi_3124 34cf75a883327d879f451a4da960d1c9 119 Pfam PF05685 Putative restriction endonuclease 50 105 1.3E-10 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_3124 34cf75a883327d879f451a4da960d1c9 119 SUPERFAMILY SSF52980 50 89 6.43E-9 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3124 34cf75a883327d879f451a4da960d1c9 119 Gene3D G3DSA:3.90.1570.10 52 111 9.6E-8 T 13-10-2018 Thivi_0334 49df5130d197f726c2cf5503d8ee7786 144 Pfam PF13581 Histidine kinase-like ATPase domain 22 141 7.4E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0334 49df5130d197f726c2cf5503d8ee7786 144 SUPERFAMILY SSF55874 31 139 2.48E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0334 49df5130d197f726c2cf5503d8ee7786 144 Gene3D G3DSA:3.30.565.10 12 144 6.7E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0387 f99a2740fe6955bac23d76a18b5940a3 686 Gene3D G3DSA:3.30.750.140 572 679 1.8E-8 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Thivi_0387 f99a2740fe6955bac23d76a18b5940a3 686 Pfam PF02120 Flagellar hook-length control protein FliK 596 672 1.4E-15 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Thivi_1380 33c3e0715947651ab413a3b4f6405787 307 Gene3D G3DSA:1.10.3210.10 2 303 5.4E-70 T 13-10-2018 Thivi_1380 33c3e0715947651ab413a3b4f6405787 307 Pfam PF08668 HDOD domain 31 230 3.8E-44 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_1380 33c3e0715947651ab413a3b4f6405787 307 SUPERFAMILY SSF109604 25 295 1.85E-53 T 13-10-2018 Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 139 256 1.0E-38 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 40 117 2.0E-9 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 Gene3D G3DSA:3.30.1370.140 23 118 4.6E-21 T 13-10-2018 IPR038527 HupH, C-terminal domain superfamily Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 Gene3D G3DSA:3.30.1370.140 140 235 4.3E-27 T 13-10-2018 IPR038527 HupH, C-terminal domain superfamily Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 28 119 6.2E-16 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_3756 0c157e23f9f8d8798fe8a702739ade69 257 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 139 255 2.6E-43 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_0115 d8a34feb072a97c25ecc19862d7cf14a 170 PIRSF PIRSF030840 3 168 1.9E-54 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Thivi_0115 d8a34feb072a97c25ecc19862d7cf14a 170 SUPERFAMILY SSF144064 5 165 3.53E-46 T 13-10-2018 Thivi_0115 d8a34feb072a97c25ecc19862d7cf14a 170 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 11 162 3.0E-59 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Thivi_0115 d8a34feb072a97c25ecc19862d7cf14a 170 Gene3D G3DSA:3.40.1570.10 2 170 1.3E-57 T 13-10-2018 Thivi_0115 d8a34feb072a97c25ecc19862d7cf14a 170 Pfam PF06228 Haem utilisation ChuX/HutX 27 162 4.0E-33 T 13-10-2018 IPR010413 Heme utilization carrier protein HutX-like Thivi_2815 4061cdb78725905f88d36c4de8e39944 442 SUPERFAMILY SSF103473 25 430 1.96E-40 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_2815 4061cdb78725905f88d36c4de8e39944 442 Pfam PF07690 Major Facilitator Superfamily 27 389 8.0E-30 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_2815 4061cdb78725905f88d36c4de8e39944 442 Gene3D G3DSA:1.20.1250.20 21 424 9.9E-37 T 13-10-2018 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 Gene3D G3DSA:3.30.420.40 3 218 1.1E-70 T 13-10-2018 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 218 1.0E-56 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 SUPERFAMILY SSF53067 110 216 2.2E-19 T 13-10-2018 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 Gene3D G3DSA:3.30.420.40 94 187 1.1E-70 T 13-10-2018 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 SUPERFAMILY SSF53067 1 100 1.12E-26 T 13-10-2018 Thivi_4306 2ab54352dafc8ae31e619486a2f80b6c 224 Pfam PF00814 Glycoprotease family 28 149 1.4E-24 T 13-10-2018 IPR000905 Gcp-like domain Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 Pfam PF13487 HD domain 220 282 1.5E-13 T 13-10-2018 Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 SMART SM00471 165 301 2.2E-5 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 Gene3D G3DSA:1.10.3210.10 24 332 1.1E-50 T 13-10-2018 Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 SUPERFAMILY SSF109604 161 330 1.07E-24 T 13-10-2018 Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 Pfam PF11871 Domain of unknown function (DUF3391) 5 138 5.7E-33 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 Thivi_3224 cb2e1384c0edf970b6f6c6d3ee345e79 423 TIGRFAM TIGR00277 HDIG: HDIG domain 166 260 1.3E-7 T 13-10-2018 IPR006675 HDIG domain Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF55326 628 822 1.49E-61 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:3.30.1330.10 625 811 2.2E-24 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF82697 1 155 1.1E-41 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_4354 aac032fed00b1d14960208361749d152 1300 SMART SM01211 1046 1299 3.3E-150 T 13-10-2018 Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF56042 831 1040 4.78E-50 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF56042 438 661 1.94E-55 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:1.10.8.750 158 218 2.4E-26 T 13-10-2018 Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF55326 226 435 9.94E-62 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF52317 1044 1299 8.13E-94 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_4354 aac032fed00b1d14960208361749d152 1300 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1300 20.907 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_4354 aac032fed00b1d14960208361749d152 1300 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1046 1299 4.9E-103 T 13-10-2018 Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:3.40.50.880 990 1300 8.1E-131 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:3.90.650.10 818 989 1.6E-30 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:3.90.650.10 425 612 3.8E-56 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Thivi_4354 aac032fed00b1d14960208361749d152 1300 SUPERFAMILY SSF109736 161 225 5.75E-21 T 13-10-2018 Thivi_4354 aac032fed00b1d14960208361749d152 1300 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1299 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_4354 aac032fed00b1d14960208361749d152 1300 Pfam PF02769 AIR synthase related protein, C-terminal domain 844 974 2.9E-11 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Thivi_4354 aac032fed00b1d14960208361749d152 1300 Pfam PF02769 AIR synthase related protein, C-terminal domain 438 591 1.5E-28 T 13-10-2018 IPR010918 PurM-like, C-terminal domain Thivi_4354 aac032fed00b1d14960208361749d152 1300 Gene3D G3DSA:3.30.1330.10 219 424 5.9E-42 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 52.798 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 PIRSF PIRSF000525 1 360 2.8E-160 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 SUPERFAMILY SSF53383 1 358 5.03E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 Gene3D G3DSA:3.40.640.10 17 256 1.6E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 Gene3D G3DSA:3.90.1150.10 257 360 1.3E-42 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 359 1.5E-163 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 Pfam PF00266 Aminotransferase class-V 4 348 1.9E-58 T 13-10-2018 IPR000192 Aminotransferase class V domain Thivi_2121 86293d235f5fd6e000e7e5a90b3daa50 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 Pfam PF12796 Ankyrin repeats (3 copies) 44 121 1.3E-12 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 Pfam PF12796 Ankyrin repeats (3 copies) 133 220 8.5E-11 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 PRINTS PR01415 Ankyrin repeat signature 58 73 1.3E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 PRINTS PR01415 Ankyrin repeat signature 106 120 1.3E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 PIRSF PIRSF000654 12 128 6.8E-15 T 13-10-2018 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 PIRSF PIRSF000654 120 235 1.3E-11 T 13-10-2018 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 SMART SM00248 90 121 0.018 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 SMART SM00248 57 86 0.0078 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 SMART SM00248 153 182 5.9E-5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 Gene3D G3DSA:1.25.40.20 127 225 3.2E-20 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 Gene3D G3DSA:1.25.40.20 18 126 1.5E-22 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_3930 8f62cb648babe0f1710e724598d5014f 238 SUPERFAMILY SSF48403 31 217 5.93E-41 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Thivi_3024 33c0f400ae0ecb8f307f40cb077be8c2 153 Pfam PF08837 Protein of unknown function (DUF1810) 8 140 5.9E-57 T 13-10-2018 IPR014937 Protein of unknown function DUF1810 Thivi_3024 33c0f400ae0ecb8f307f40cb077be8c2 153 Gene3D G3DSA:1.25.40.380 1 144 8.2E-57 T 13-10-2018 IPR036287 Rv1873-like superfamily Thivi_3024 33c0f400ae0ecb8f307f40cb077be8c2 153 SUPERFAMILY SSF140736 6 142 7.98E-58 T 13-10-2018 IPR036287 Rv1873-like superfamily Thivi_3024 33c0f400ae0ecb8f307f40cb077be8c2 153 PIRSF PIRSF008546 3 144 4.9E-57 T 13-10-2018 IPR014937 Protein of unknown function DUF1810 Thivi_0333 d1245135389b62baae78e2ead309881d 136 Gene3D G3DSA:3.30.565.10 9 135 1.8E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0333 d1245135389b62baae78e2ead309881d 136 SUPERFAMILY SSF55874 26 132 1.7E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0333 d1245135389b62baae78e2ead309881d 136 SMART SM00387 37 136 1.3E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0333 d1245135389b62baae78e2ead309881d 136 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 132 3.4E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 SUPERFAMILY SSF53335 77 269 4.83E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 Gene3D G3DSA:1.10.155.10 1 75 8.6E-17 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PIRSF PIRSF000410 1 277 2.9E-76 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 Gene3D G3DSA:3.40.50.150 76 277 1.1E-57 T 13-10-2018 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 270 8.8E-57 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 6.8E-36 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 SUPERFAMILY SSF47757 4 76 4.45E-18 T 13-10-2018 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 SMART SM00138 9 274 7.9E-82 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_0325 44eb4ab4a76402e92b9d2a3994273139 281 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 59 7.0E-12 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Gene3D G3DSA:1.10.8.210 150 213 2.6E-9 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 8.5E-70 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 52.636 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 SUPERFAMILY SSF75615 114 207 4.58E-26 T 13-10-2018 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Gene3D G3DSA:3.40.1010.10 216 332 1.3E-45 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Gene3D G3DSA:3.40.50.720 1 112 8.4E-35 T 13-10-2018 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Gene3D G3DSA:3.30.160.110 113 148 1.3E-16 T 13-10-2018 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 PIRSF PIRSF036426 1 465 1.9E-194 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 1.1E-19 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Gene3D G3DSA:3.30.950.10 333 467 6.7E-48 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 SUPERFAMILY SSF51735 1 111 1.25E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 1.6E-92 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 2.6E-51 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 SUPERFAMILY SSF53790 214 461 1.24E-83 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_2162 8003798befb00b973b63f8f91eb013ad 473 Pfam PF13241 Putative NAD(P)-binding 6 115 1.2E-28 T 13-10-2018 Thivi_3900 213ffd8851fbf1f758b760ceb2bbeda8 255 SUPERFAMILY SSF160950 4 253 4.18E-77 T 13-10-2018 IPR036268 ZapD domain superfamily Thivi_3900 213ffd8851fbf1f758b760ceb2bbeda8 255 Gene3D G3DSA:1.10.3900.10 13 180 8.6E-85 T 13-10-2018 Thivi_3900 213ffd8851fbf1f758b760ceb2bbeda8 255 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 253 31.503 T 13-10-2018 IPR009777 Cell division protein ZapD Thivi_3900 213ffd8851fbf1f758b760ceb2bbeda8 255 Pfam PF07072 Cell division protein 19 229 1.4E-73 T 13-10-2018 IPR009777 Cell division protein ZapD Thivi_3900 213ffd8851fbf1f758b760ceb2bbeda8 255 Gene3D G3DSA:2.60.440.10 6 253 8.6E-85 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF55073 850 1008 2.35E-51 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:3.30.450.40 562 710 1.3E-14 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF00672 HAMP domain 254 298 2.3E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF13426 PAS domain 445 543 5.6E-12 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00065 566 717 2.2E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF13185 GAF domain 564 708 1.2E-26 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:3.30.450.20 309 419 7.1E-26 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF00990 Diguanylate cyclase, GGDEF domain 845 1002 2.4E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF00989 PAS fold 723 823 3.8E-16 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00304 251 303 1.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00086 792 834 1.9E-6 T 13-10-2018 IPR001610 PAC motif Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00086 379 421 1.8 T 13-10-2018 IPR001610 PAC motif Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00086 503 545 0.29 T 13-10-2018 IPR001610 PAC motif Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00091 721 787 2.5E-11 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00091 310 373 7.1 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00091 433 500 2.2E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF55785 302 419 4.67E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF08448 PAS fold 320 423 1.1E-12 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:3.30.70.270 839 1011 1.8E-60 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF55785 706 832 3.35E-29 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 841 1005 9.3E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SMART SM00267 834 1007 4.2E-69 T 13-10-2018 IPR000160 GGDEF domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF55781 566 720 3.92E-17 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF158472 253 298 1.57E-7 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:3.30.450.20 711 832 1.1E-29 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:3.30.450.20 420 543 1.1E-22 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Gene3D G3DSA:1.20.1480.50 220 308 1.5E-6 T 13-10-2018 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 Pfam PF11845 Protein of unknown function (DUF3365) 37 215 2.3E-25 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 SUPERFAMILY SSF55785 418 543 1.44E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 718 841 1.7E-26 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 550 2.6E-17 T 13-10-2018 IPR000014 PAS domain Thivi_2765 4878c5e87f7798accadecac07819e8ee 1013 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 306 428 1.2E-16 T 13-10-2018 IPR000014 PAS domain Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 Gene3D G3DSA:3.40.1360.10 77 198 2.4E-37 T 13-10-2018 Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 Pfam PF13662 Toprim domain 81 171 1.0E-19 T 13-10-2018 IPR006171 TOPRIM domain Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 SMART SM00493 80 165 2.4E-5 T 13-10-2018 IPR006171 TOPRIM domain Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 Gene3D G3DSA:1.10.8.420 1 52 7.4E-18 T 13-10-2018 Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 SUPERFAMILY SSF111304 5 198 4.32E-70 T 13-10-2018 IPR023627 Recombination protein RecR Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 TIGRFAM TIGR00615 recR: recombination protein RecR 5 196 9.0E-73 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 Pfam PF02132 RecR protein 41 78 6.3E-14 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Thivi_2711 50421373c28aec7ecfacd9a0aad9802e 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 96.576 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Gene3D G3DSA:3.40.50.2300 1 132 8.4E-35 T 13-10-2018 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 2.2E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 SUPERFAMILY SSF46689 351 439 4.06E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Gene3D G3DSA:1.10.8.60 312 375 7.6E-18 T 13-10-2018 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Pfam PF00072 Response regulator receiver domain 3 112 4.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 SMART SM00382 161 305 3.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Gene3D G3DSA:1.10.10.60 376 442 2.1E-14 T 13-10-2018 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 SUPERFAMILY SSF52172 1 183 1.15E-42 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 2.6E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 2.6E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Gene3D G3DSA:3.40.50.300 138 311 1.9E-62 T 13-10-2018 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 SMART SM00448 1 112 3.3E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 Pfam PF00158 Sigma-54 interaction domain 141 307 7.2E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_3948 6db2ceaa9d4a936fdbfa678f6662a954 444 SUPERFAMILY SSF52540 141 380 1.14E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 SMART SM00478 46 203 1.2E-25 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 PIRSF PIRSF001435 10 228 7.1E-71 T 13-10-2018 Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 180 1.5E-16 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 SUPERFAMILY SSF48150 14 222 4.08E-52 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 Gene3D G3DSA:1.10.340.30 29 141 1.2E-34 T 13-10-2018 Thivi_4504 ccc6dc3aab205eb6e4818288e179130b 232 Gene3D G3DSA:1.10.1670.10 142 231 5.0E-15 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Thivi_3652 b3a3c3fa3d9fabf03fed77e6a3f8d433 235 Gene3D G3DSA:3.30.420.130 99 218 3.3E-31 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_3652 b3a3c3fa3d9fabf03fed77e6a3f8d433 235 SUPERFAMILY SSF53146 99 217 1.44E-30 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_3652 b3a3c3fa3d9fabf03fed77e6a3f8d433 235 Pfam PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal 6 88 1.9E-25 T 13-10-2018 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal Thivi_3652 b3a3c3fa3d9fabf03fed77e6a3f8d433 235 Gene3D G3DSA:1.10.150.590 1 90 8.8E-20 T 13-10-2018 IPR038127 NafY, N-terminal domain superfamily Thivi_3652 b3a3c3fa3d9fabf03fed77e6a3f8d433 235 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 112 200 6.1E-18 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SUPERFAMILY SSF55073 460 617 3.45E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 451 4.2E-8 T 13-10-2018 IPR000014 PAS domain Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Gene3D G3DSA:3.40.190.10 144 240 7.8E-59 T 13-10-2018 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Gene3D G3DSA:3.30.450.20 323 442 3.7E-22 T 13-10-2018 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Gene3D G3DSA:3.30.70.270 443 619 1.0E-53 T 13-10-2018 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SMART SM00267 444 618 1.8E-56 T 13-10-2018 IPR000160 GGDEF domain Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Gene3D G3DSA:3.40.190.10 49 276 7.8E-59 T 13-10-2018 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Pfam PF08447 PAS fold 350 433 2.8E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 60 267 3.6E-29 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SMART SM00062 59 276 1.0E-14 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SMART SM00091 324 395 0.0015 T 13-10-2018 IPR000014 PAS domain Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SUPERFAMILY SSF53850 60 281 2.26E-40 T 13-10-2018 Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 SUPERFAMILY SSF55785 340 447 1.26E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 453 617 5.3E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_3928 50c4e6075f39eb8b5a2d41e4ea4bd1cc 630 Pfam PF00990 Diguanylate cyclase, GGDEF domain 456 614 4.9E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_2494 329d2f5d74f730f7bff731e5434c7e89 356 PIRSF PIRSF029693 7 356 1.6E-98 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_2494 329d2f5d74f730f7bff731e5434c7e89 356 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 33 356 5.9E-118 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_1105 04ca7e3dfbcaa29d2a745ff926e08a55 940 SUPERFAMILY SSF52540 132 579 5.62E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1105 04ca7e3dfbcaa29d2a745ff926e08a55 940 Gene3D G3DSA:3.40.50.300 87 341 1.9E-7 T 13-10-2018 Thivi_1105 04ca7e3dfbcaa29d2a745ff926e08a55 940 Gene3D G3DSA:3.40.50.300 342 599 1.5E-14 T 13-10-2018 Thivi_1105 04ca7e3dfbcaa29d2a745ff926e08a55 940 Pfam PF04851 Type III restriction enzyme, res subunit 95 293 2.1E-14 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_1144 1546d044f1c50de05a52a591ee3fdbbd 110 SUPERFAMILY SSF89957 3 98 1.7E-20 T 13-10-2018 IPR029756 MTH1187/YkoF-like Thivi_1144 1546d044f1c50de05a52a591ee3fdbbd 110 Gene3D G3DSA:3.30.70.930 1 98 1.6E-19 T 13-10-2018 IPR029756 MTH1187/YkoF-like Thivi_1144 1546d044f1c50de05a52a591ee3fdbbd 110 Pfam PF01910 Thiamine-binding protein 6 95 5.5E-18 T 13-10-2018 IPR002767 Thiamine-binding protein Thivi_1144 1546d044f1c50de05a52a591ee3fdbbd 110 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 3 99 1.9E-15 T 13-10-2018 IPR002767 Thiamine-binding protein Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 Pfam PF13180 PDZ domain 305 389 4.0E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 59 265 8.3E-66 T 13-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 SUPERFAMILY SSF159501 52 294 7.85E-62 T 13-10-2018 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 SMART SM00228 304 376 1.1E-5 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 Gene3D G3DSA:3.40.50.11550 56 275 4.2E-23 T 13-10-2018 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 SUPERFAMILY SSF50156 303 375 8.68E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 Gene3D G3DSA:2.30.42.10 305 391 3.9E-11 T 13-10-2018 Thivi_1882 54bb82b3f98a0ebaa1a5c52d6fa807d3 391 Gene3D G3DSA:1.10.8.760 164 228 4.2E-23 T 13-10-2018 Thivi_0799 31155af8b8113715ec23f9360943fe44 172 Gene3D G3DSA:3.30.700.10 8 172 4.7E-37 T 13-10-2018 Thivi_0799 31155af8b8113715ec23f9360943fe44 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0799 31155af8b8113715ec23f9360943fe44 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 2.4E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0799 31155af8b8113715ec23f9360943fe44 172 SUPERFAMILY SSF54523 8 172 3.56E-25 T 13-10-2018 Thivi_0799 31155af8b8113715ec23f9360943fe44 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.6E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0799 31155af8b8113715ec23f9360943fe44 172 Pfam PF00114 Pilin (bacterial filament) 36 172 1.2E-14 T 13-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 Thivi_0226 cb1406ce7a94f815f26aeec917dfdc33 324 SUPERFAMILY SSF56300 92 311 3.28E-35 T 13-10-2018 Thivi_0226 cb1406ce7a94f815f26aeec917dfdc33 324 Gene3D G3DSA:3.60.21.10 91 271 4.9E-23 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_0226 cb1406ce7a94f815f26aeec917dfdc33 324 Pfam PF00149 Calcineurin-like phosphoesterase 92 250 4.5E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Gene3D G3DSA:2.20.25.520 1 54 5.3E-13 T 13-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 SUPERFAMILY SSF53335 61 252 2.73E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Pfam PF13489 Methyltransferase domain 84 238 7.2E-13 T 13-10-2018 Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Gene3D G3DSA:3.40.50.150 58 255 2.8E-42 T 13-10-2018 Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Pfam PF08484 C-methyltransferase C-terminal domain 244 402 1.3E-63 T 13-10-2018 IPR013691 C-methyltransferase Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Gene3D G3DSA:3.40.50.720 309 411 9.5E-36 T 13-10-2018 Thivi_0884 9036e10c0ac2e748ed2b85937de3e034 411 Pfam PF08421 Putative zinc binding domain 3 64 9.2E-22 T 13-10-2018 IPR013630 Methyltransferase putative zinc binding domain Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 7.8E-24 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Gene3D G3DSA:3.30.930.10 11 465 1.9E-235 T 13-10-2018 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 8.4E-243 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-18 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 PIRSF PIRSF001535 1 573 1.5E-265 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Gene3D G3DSA:3.90.960.10 240 389 1.9E-235 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 SUPERFAMILY SSF55826 218 390 9.03E-28 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 42.009 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 SUPERFAMILY SSF55681 10 478 2.49E-106 T 13-10-2018 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Pfam PF03129 Anticodon binding domain 476 568 2.8E-18 T 13-10-2018 IPR004154 Anticodon-binding Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.2E-47 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 SUPERFAMILY SSF52954 464 571 1.64E-30 T 13-10-2018 Thivi_1006 2acf142368a08d7f87742748dd4f3467 573 Gene3D G3DSA:3.40.50.800 4 553 1.9E-235 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Pfam PF08446 PAS fold 13 69 5.6E-6 T 13-10-2018 IPR013654 PAS fold-2 GO:0006355 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Gene3D G3DSA:3.30.450.40 13 478 1.0E-124 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 PRINTS PR01033 Phytochrome signature 154 173 6.8E-10 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 PRINTS PR01033 Phytochrome signature 427 446 6.8E-10 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 PRINTS PR01033 Phytochrome signature 239 260 6.8E-10 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 PRINTS PR01033 Phytochrome signature 465 483 6.8E-10 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Gene3D G3DSA:3.30.450.20 17 242 1.0E-124 T 13-10-2018 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Gene3D G3DSA:3.30.450.270 308 497 1.0E-124 T 13-10-2018 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 SMART SM00065 139 312 1.2E-4 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 SUPERFAMILY SSF55781 140 300 1.64E-43 T 13-10-2018 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Pfam PF01590 GAF domain 145 299 3.9E-13 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 SUPERFAMILY SSF55781 317 499 3.04E-29 T 13-10-2018 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 Pfam PF00360 Phytochrome region 326 498 1.3E-28 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Thivi_2380 7002fd08af92039624665f72ffe12d0b 502 SUPERFAMILY SSF55785 10 116 1.34E-14 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2672 ca967ad6c0daea9d8af95ccdea88604e 348 Pfam PF08668 HDOD domain 104 291 1.1E-33 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_2672 ca967ad6c0daea9d8af95ccdea88604e 348 SUPERFAMILY SSF109604 100 319 6.91E-41 T 13-10-2018 Thivi_2672 ca967ad6c0daea9d8af95ccdea88604e 348 Gene3D G3DSA:1.10.3210.10 84 325 2.6E-47 T 13-10-2018 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 Gene3D G3DSA:1.20.5.250 1 41 1.4E-19 T 13-10-2018 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 PIRSF PIRSF002900 1 41 6.6E-14 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 Pfam PF00556 Antenna complex alpha/beta subunit 7 41 6.3E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 SUPERFAMILY SSF56918 2 41 1.81E-11 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0281 aea77a244744561e1842644b6d9017d3 41 PRINTS PR00674 Light harvesting protein B chain signature 3 23 4.4E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 PRINTS PR00674 Light harvesting protein B chain signature 23 40 4.4E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0281 aea77a244744561e1842644b6d9017d3 41 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 8 39 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0284 aea77a244744561e1842644b6d9017d3 41 Gene3D G3DSA:1.20.5.250 1 41 1.4E-19 T 13-10-2018 Thivi_0284 aea77a244744561e1842644b6d9017d3 41 PIRSF PIRSF002900 1 41 6.6E-14 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0284 aea77a244744561e1842644b6d9017d3 41 Pfam PF00556 Antenna complex alpha/beta subunit 7 41 6.3E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0284 aea77a244744561e1842644b6d9017d3 41 SUPERFAMILY SSF56918 2 41 1.81E-11 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0284 aea77a244744561e1842644b6d9017d3 41 PRINTS PR00674 Light harvesting protein B chain signature 3 23 4.4E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0284 aea77a244744561e1842644b6d9017d3 41 PRINTS PR00674 Light harvesting protein B chain signature 23 40 4.4E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0284 aea77a244744561e1842644b6d9017d3 41 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 8 39 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1272 618f61049376193e631c5c0c1688385b 458 Pfam PF05598 Transposase domain (DUF772) 85 152 6.9E-9 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Thivi_1272 618f61049376193e631c5c0c1688385b 458 Pfam PF13751 Transposase DDE domain 376 436 7.4E-11 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_2887 618f61049376193e631c5c0c1688385b 458 Pfam PF05598 Transposase domain (DUF772) 85 152 6.9E-9 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Thivi_2887 618f61049376193e631c5c0c1688385b 458 Pfam PF13751 Transposase DDE domain 376 436 7.4E-11 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_4566 618f61049376193e631c5c0c1688385b 458 Pfam PF05598 Transposase domain (DUF772) 85 152 6.9E-9 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Thivi_4566 618f61049376193e631c5c0c1688385b 458 Pfam PF13751 Transposase DDE domain 376 436 7.4E-11 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 6.0E-91 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.66 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 Pfam PF01678 Diaminopimelate epimerase 154 268 3.4E-28 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.5E-32 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 SUPERFAMILY SSF54506 3 274 3.77E-56 T 13-10-2018 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 Gene3D G3DSA:3.10.310.10 117 263 2.0E-102 T 13-10-2018 Thivi_2388 da5e1b61c4299eff3437f5c2b494ced0 276 Gene3D G3DSA:3.10.310.10 5 272 2.0E-102 T 13-10-2018 Thivi_0746 b4b003b1ab555301199458b410849c01 346 SUPERFAMILY SSF52540 4 268 1.5E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 128 157 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 244 273 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 166 195 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 211 239 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 94 123 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 PRINTS PR00142 RecA protein signature 298 315 5.1E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 Hamap MF_00268 Protein RecA [recA]. 5 330 51.657 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 Gene3D G3DSA:3.30.250.10 269 327 1.5E-25 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Thivi_0746 b4b003b1ab555301199458b410849c01 346 SUPERFAMILY SSF54752 269 325 6.02E-20 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Thivi_0746 b4b003b1ab555301199458b410849c01 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 325 1.0E-172 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_0746 b4b003b1ab555301199458b410849c01 346 Gene3D G3DSA:3.40.50.300 32 268 3.0E-83 T 13-10-2018 Thivi_0746 b4b003b1ab555301199458b410849c01 346 ProSitePatterns PS00321 recA signature. 214 222 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Thivi_0746 b4b003b1ab555301199458b410849c01 346 SMART SM00382 58 229 6.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0746 b4b003b1ab555301199458b410849c01 346 Pfam PF00154 recA bacterial DNA recombination protein 7 269 4.5E-144 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Thivi_1727 74f41eecd5a259f9b63511e8661e95db 501 Pfam PF13447 Seven times multi-haem cytochrome CxxCH 192 291 1.4E-21 T 13-10-2018 Thivi_1727 74f41eecd5a259f9b63511e8661e95db 501 Gene3D G3DSA:1.20.850.10 224 455 3.5E-33 T 13-10-2018 Thivi_1727 74f41eecd5a259f9b63511e8661e95db 501 Gene3D G3DSA:1.10.3820.10 11 100 1.8E-5 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Thivi_1727 74f41eecd5a259f9b63511e8661e95db 501 SUPERFAMILY SSF48695 49 437 8.5E-70 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3621 1486d274966363078666b4e5eb6e1230 179 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Thivi_3621 1486d274966363078666b4e5eb6e1230 179 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.8E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_3621 1486d274966363078666b4e5eb6e1230 179 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.8E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_3621 1486d274966363078666b4e5eb6e1230 179 Gene3D G3DSA:3.90.79.10 1 157 5.9E-43 T 13-10-2018 Thivi_3621 1486d274966363078666b4e5eb6e1230 179 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 35.938 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Thivi_3621 1486d274966363078666b4e5eb6e1230 179 Pfam PF00293 NUDIX domain 7 145 1.7E-23 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_3621 1486d274966363078666b4e5eb6e1230 179 SUPERFAMILY SSF55811 4 159 1.9E-30 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_0331 4667526b68b695be18ffdc8924d4f77f 285 SUPERFAMILY SSF52091 156 251 1.16E-17 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0331 4667526b68b695be18ffdc8924d4f77f 285 Gene3D G3DSA:3.30.750.24 155 272 2.3E-34 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0331 4667526b68b695be18ffdc8924d4f77f 285 Pfam PF01740 STAS domain 167 262 5.8E-12 T 13-10-2018 IPR002645 STAS domain Thivi_0331 4667526b68b695be18ffdc8924d4f77f 285 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 6 109 3.6E-17 T 13-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain Thivi_4110 96da95fa6f8d5e837e46378db3e668c4 133 Pfam PF00072 Response regulator receiver domain 3 109 4.8E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4110 96da95fa6f8d5e837e46378db3e668c4 133 SMART SM00448 1 112 4.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4110 96da95fa6f8d5e837e46378db3e668c4 133 Gene3D G3DSA:3.40.50.2300 1 122 1.2E-18 T 13-10-2018 Thivi_4110 96da95fa6f8d5e837e46378db3e668c4 133 SUPERFAMILY SSF52172 1 113 7.68E-22 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3823 c8547b7500af5cafcff12e9398f4add2 335 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 42 326 2.4E-56 T 13-10-2018 Thivi_3823 c8547b7500af5cafcff12e9398f4add2 335 Pfam PF04087 Domain of unknown function (DUF389) 145 280 6.3E-36 T 13-10-2018 IPR005240 Protein of unknown function DUF389 Thivi_3157 160dc49bcb4517f0c6b68f182909ceeb 306 Pfam PF12697 Alpha/beta hydrolase family 51 295 8.4E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_3157 160dc49bcb4517f0c6b68f182909ceeb 306 SUPERFAMILY SSF53474 27 301 1.84E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3157 160dc49bcb4517f0c6b68f182909ceeb 306 Gene3D G3DSA:3.40.50.1820 12 303 1.9E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 SUPERFAMILY SSF110997 264 338 5.49E-12 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 Gene3D G3DSA:2.40.40.10 95 189 3.2E-35 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 Pfam PF05036 Sporulation related domain 267 331 2.0E-12 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 Gene3D G3DSA:3.30.70.1070 268 338 1.3E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 98 190 3.6E-43 T 13-10-2018 IPR012997 Rare lipoprotein A Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 188 25.236 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 SUPERFAMILY SSF50685 86 183 3.49E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_3832 57f09849a8514ce2c326021bb7d92f00 343 Pfam PF03330 Lytic transglycolase 96 184 3.8E-24 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_1835 21ca1af84cf09aaf818eb423bd631cbd 247 Pfam PF08861 Domain of unknown function DUF1828 25 113 1.4E-16 T 13-10-2018 IPR014960 Domain of unknown function DUF1828 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Pfam PF00958 GMP synthase C terminal domain 432 523 8.4E-42 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Pfam PF00117 Glutamine amidotransferase class-I 11 199 1.1E-38 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 176 189 2.8E-7 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.8E-7 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 2.8E-7 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Gene3D G3DSA:3.40.50.880 8 205 1.8E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00097 Anthranilate synthase component II signature 176 189 4.2E-6 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.2E-6 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.2E-6 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 SUPERFAMILY SSF54810 404 524 9.94E-48 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Gene3D G3DSA:3.40.50.620 208 404 3.2E-78 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 211 524 1.0E-149 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 524 56.029 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Gene3D G3DSA:3.30.300.10 405 524 1.0E-50 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 SUPERFAMILY SSF52317 4 236 5.42E-59 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 SUPERFAMILY SSF52402 196 425 5.73E-59 T 13-10-2018 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 203 2.4E-76 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Thivi_2268 db2080dfb0194b7c86e6246ce16a4721 524 Pfam PF02540 NAD synthase 214 256 4.3E-7 T 13-10-2018 IPR022310 NAD/GMP synthase Thivi_1284 0eb43640309459e0869c228093f75026 224 PIRSF PIRSF000013 6 189 1.2E-25 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Thivi_1284 0eb43640309459e0869c228093f75026 224 SUPERFAMILY SSF48695 18 173 1.02E-23 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1284 0eb43640309459e0869c228093f75026 224 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 14 175 5.8E-37 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_1284 0eb43640309459e0869c228093f75026 224 Gene3D G3DSA:1.10.3820.10 9 184 3.0E-31 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Gene3D G3DSA:3.40.1390.10 1 79 2.0E-24 T 13-10-2018 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Pfam PF01225 Mur ligase family, catalytic domain 24 70 2.6E-9 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Pfam PF08245 Mur ligase middle domain 104 300 2.3E-41 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 SUPERFAMILY SSF63418 1 96 3.14E-26 T 13-10-2018 IPR035911 MurE/MurF, N-terminal Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 451 9.2E-131 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 SUPERFAMILY SSF53623 100 319 7.06E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 SUPERFAMILY SSF53244 320 451 1.83E-34 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Gene3D G3DSA:3.40.1190.10 80 318 4.9E-72 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 452 33.447 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Gene3D G3DSA:3.90.190.20 320 454 4.3E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_2323 47ad357d4c5b784063525ad6564b7ce5 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 397 9.6E-13 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_3397 d47e7a7cb42f427713154a61d94627ec 363 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 6 347 26.297 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_3397 d47e7a7cb42f427713154a61d94627ec 363 Pfam PF03116 NQR2, RnfD, RnfE family 9 345 2.4E-105 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Thivi_3397 d47e7a7cb42f427713154a61d94627ec 363 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 12 346 1.3E-111 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Gene3D G3DSA:2.30.130.10 247 305 2.9E-20 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Gene3D G3DSA:3.30.2350.10 1 245 4.0E-88 T 13-10-2018 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 305 19.509 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 181 5.5E-58 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 249 305 4.7E-19 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 SUPERFAMILY SSF55120 11 242 7.77E-79 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 SUPERFAMILY SSF88697 248 305 1.44E-11 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 245 1.6E-18 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Thivi_3170 01c56cb10c3f4cbb74c3c05f57230806 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 210 1.0E-78 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_2107 f11836ef23f6f1ff6080da9db7fa370c 124 SUPERFAMILY SSF52172 2 121 3.98E-37 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2107 f11836ef23f6f1ff6080da9db7fa370c 124 Gene3D G3DSA:3.40.50.12740 1 124 7.4E-43 T 13-10-2018 Thivi_2107 f11836ef23f6f1ff6080da9db7fa370c 124 SMART SM00448 3 116 1.6E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2107 f11836ef23f6f1ff6080da9db7fa370c 124 Pfam PF00072 Response regulator receiver domain 5 117 5.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 SUPERFAMILY SSF46785 9 137 3.22E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 SUPERFAMILY SSF50331 128 195 1.6E-18 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 Pfam PF03459 TOBE domain 130 191 6.1E-17 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 128 195 6.6E-21 T 13-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 Gene3D G3DSA:1.10.10.10 7 111 2.5E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 23 107 2.9E-31 T 13-10-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 PIRSF PIRSF005763 6 269 6.0E-87 T 13-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 Gene3D G3DSA:2.40.50.100 115 190 1.5E-23 T 13-10-2018 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 89 4.8E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 SUPERFAMILY SSF50331 206 268 1.9E-11 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2526 85404231a1ff7f4f4cdc31e8ec54ba3a 269 Gene3D G3DSA:2.40.50.100 204 269 1.3E-11 T 13-10-2018 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Gene3D G3DSA:3.40.190.10 89 183 4.2E-55 T 13-10-2018 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Gene3D G3DSA:3.40.190.10 6 204 4.2E-55 T 13-10-2018 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 SUPERFAMILY SSF53850 3 216 1.9E-58 T 13-10-2018 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 191 290 8.0E-30 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Pfam PF01634 ATP phosphoribosyltransferase 50 211 3.7E-40 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 3 290 28.57 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 SUPERFAMILY SSF54913 219 290 6.56E-19 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Pfam PF08029 HisG, C-terminal domain 216 288 1.5E-23 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 Gene3D G3DSA:3.30.70.120 219 290 4.1E-20 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_1269 4e27fcfb6cb54e16abb4eaa1e0524765 290 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 189 1.2E-50 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 SUPERFAMILY SSF53706 4 581 1.15E-131 T 13-10-2018 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Gene3D G3DSA:2.40.40.20 551 691 1.5E-43 T 13-10-2018 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Pfam PF01568 Molydopterin dinucleotide binding domain 580 683 2.4E-29 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 SUPERFAMILY SSF50692 534 690 6.56E-43 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Gene3D G3DSA:3.40.50.740 50 489 4.5E-116 T 13-10-2018 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 617 644 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Pfam PF00384 Molybdopterin oxidoreductase 384 467 1.2E-11 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Pfam PF00384 Molybdopterin oxidoreductase 50 317 1.8E-40 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0615 11075655b0fd4d8e73b7249e27320ef7 691 Gene3D G3DSA:3.40.228.10 134 325 4.5E-116 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 SUPERFAMILY SSF100934 507 613 1.96E-20 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Gene3D G3DSA:3.30.420.40 180 366 3.7E-165 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 334 350 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 198 208 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 365 385 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.7E-81 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.9E-287 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Gene3D G3DSA:3.30.420.40 5 379 3.7E-165 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Gene3D G3DSA:2.60.34.10 384 523 1.8E-63 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Gene3D G3DSA:1.20.1270.10 524 607 4.5E-25 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 SUPERFAMILY SSF53067 187 382 1.66E-66 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Gene3D G3DSA:3.90.640.10 229 316 3.7E-165 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.64 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 SUPERFAMILY SSF100920 384 540 1.31E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 SUPERFAMILY SSF53067 4 184 9.59E-66 T 13-10-2018 Thivi_4597 0c536a06472917d510f7e19818c45a84 641 Pfam PF00012 Hsp70 protein 4 603 3.5E-260 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Gene3D G3DSA:1.10.1060.10 356 436 2.7E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 SUPERFAMILY SSF142019 87 296 1.83E-56 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Gene3D G3DSA:3.40.50.11540 136 285 3.8E-12 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 276 6.1E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Pfam PF13183 4Fe-4S dicluster domain 367 422 2.5E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Pfam PF10531 SLBB domain 289 337 2.4E-15 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 437 3.9E-173 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 105 3.1E-34 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 SUPERFAMILY SSF46548 328 435 1.7E-18 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0071 27ffe1b347f12b24537c3d4a891017ad 483 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 483 165.854 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_0021 af06af0e290abcdd45d22680acafaac3 274 Gene3D G3DSA:3.20.10.10 114 271 1.8E-44 T 13-10-2018 Thivi_0021 af06af0e290abcdd45d22680acafaac3 274 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 257 3.3E-71 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Thivi_0021 af06af0e290abcdd45d22680acafaac3 274 Pfam PF01063 Amino-transferase class IV 25 247 8.9E-42 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Thivi_0021 af06af0e290abcdd45d22680acafaac3 274 Gene3D G3DSA:3.30.470.10 3 112 8.3E-31 T 13-10-2018 Thivi_0021 af06af0e290abcdd45d22680acafaac3 274 SUPERFAMILY SSF56752 4 255 5.49E-62 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 PIRSF PIRSF002900 1 48 3.5E-14 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 Gene3D G3DSA:1.20.5.250 4 48 3.3E-20 T 13-10-2018 Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 SUPERFAMILY SSF56918 3 48 7.06E-12 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 Pfam PF00556 Antenna complex alpha/beta subunit 14 48 7.0E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 15 46 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 PRINTS PR00674 Light harvesting protein B chain signature 30 47 4.0E-7 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1987 dd5f6bc8f6810dfae95d0dd202fe2d2c 48 PRINTS PR00674 Light harvesting protein B chain signature 10 30 4.0E-7 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Gene3D G3DSA:1.25.50.10 557 878 7.1E-123 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 SUPERFAMILY SSF55486 211 456 5.42E-78 T 13-10-2018 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 555 3.9E-27 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Gene3D G3DSA:1.10.390.10 286 449 2.6E-65 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 877 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 878 5.3E-127 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Gene3D G3DSA:1.10.1740.60 201 285 6.9E-42 T 13-10-2018 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 SUPERFAMILY SSF63737 5 199 6.54E-44 T 13-10-2018 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 2.0E-10 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 2.0E-10 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 2.0E-10 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 2.0E-10 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 2.0E-10 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Pfam PF01433 Peptidase family M1 domain 214 445 2.3E-55 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Gene3D G3DSA:2.60.40.1730 16 200 1.1E-71 T 13-10-2018 Thivi_0728 1dbad46eac378a58f746912c3cccca94 881 Gene3D G3DSA:2.60.40.1840 450 556 8.6E-32 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 453 2.9E-115 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 SUPERFAMILY SSF50156 89 188 5.26E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 Gene3D G3DSA:2.30.42.10 222 308 5.5E-20 T 13-10-2018 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 SUPERFAMILY SSF50156 210 294 1.18E-15 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 Gene3D G3DSA:2.30.42.10 127 220 3.2E-13 T 13-10-2018 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 Pfam PF02163 Peptidase family M50 10 439 1.8E-79 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 SMART SM00228 211 280 1.1E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_2752 b83d2ffc40b9be816a18ef3edb8bfa79 454 SMART SM00228 115 187 0.032 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 143 156 7.9E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 42 54 7.9E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 90 108 7.9E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 176 187 7.9E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 39 234 2.1E-15 T 13-10-2018 IPR000477 Reverse transcriptase domain Thivi_1660 ce3798b0d43d087b9938839d4dd1a76e 317 SUPERFAMILY SSF56672 36 242 2.31E-11 T 13-10-2018 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 126 139 - T 13-10-2018 IPR033135 ClpP, histidine active site Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 17 207 44.551 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 Gene3D G3DSA:3.90.226.10 5 208 7.0E-84 T 13-10-2018 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 Pfam PF00574 Clp protease 27 206 1.8E-87 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 16 205 8.0E-105 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 104 115 - T 13-10-2018 IPR018215 ClpP, Ser active site Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 SUPERFAMILY SSF52096 25 207 4.21E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 PRINTS PR00127 Clp protease catalytic subunit P signature 182 201 3.6E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 PRINTS PR00127 Clp protease catalytic subunit P signature 104 121 3.6E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 PRINTS PR00127 Clp protease catalytic subunit P signature 125 144 3.6E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 PRINTS PR00127 Clp protease catalytic subunit P signature 33 48 3.6E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0628 222f7ebb1fa00ff8b6ea527422f4608a 214 PRINTS PR00127 Clp protease catalytic subunit P signature 73 93 3.6E-53 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Thivi_0724 3f7ead673a25664ed2c8690a0d9555d0 233 SMART SM00382 36 224 3.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0724 3f7ead673a25664ed2c8690a0d9555d0 233 Pfam PF00005 ABC transporter 27 175 2.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0724 3f7ead673a25664ed2c8690a0d9555d0 233 SUPERFAMILY SSF52540 7 227 9.51E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0724 3f7ead673a25664ed2c8690a0d9555d0 233 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0724 3f7ead673a25664ed2c8690a0d9555d0 233 Gene3D G3DSA:3.40.50.300 4 232 1.3E-66 T 13-10-2018 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 Pfam PF00005 ABC transporter 18 159 4.8E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 SUPERFAMILY SSF50331 236 354 1.42E-16 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 5 354 2.9E-128 T 13-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 Gene3D G3DSA:3.40.50.300 17 229 7.3E-57 T 13-10-2018 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 SMART SM00382 25 209 3.6E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 SUPERFAMILY SSF52540 12 221 3.8E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 Pfam PF03459 TOBE domain 292 354 1.5E-10 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 Gene3D G3DSA:2.40.50.100 291 355 2.5E-10 T 13-10-2018 Thivi_2521 44a64f6f8e93c38fcd2cba9d3860dd8c 356 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0434 593128a5dcbeb14b09cace3b40898665 691 Pfam PF06202 Amylo-alpha-1,6-glucosidase 321 683 2.1E-118 T 13-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Thivi_0434 593128a5dcbeb14b09cace3b40898665 691 Pfam PF12439 Glycogen debranching enzyme N terminal 30 248 9.7E-63 T 13-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal Thivi_0434 593128a5dcbeb14b09cace3b40898665 691 Gene3D G3DSA:1.50.10.10 348 684 8.7E-36 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Thivi_0434 593128a5dcbeb14b09cace3b40898665 691 SUPERFAMILY SSF48208 195 687 5.29E-72 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Thivi_2325 016e5b64420bffe09897a9a72d7ac649 96 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 11 80 2.9E-20 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Thivi_2325 016e5b64420bffe09897a9a72d7ac649 96 Pfam PF04999 Cell division protein FtsL 7 88 1.2E-22 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Thivi_2325 016e5b64420bffe09897a9a72d7ac649 96 Hamap MF_00910 Cell division protein FtsL [ftsL]. 5 88 15.119 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 Gene3D G3DSA:3.10.20.30 1 99 1.1E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 104 1.6E-29 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 Pfam PF13534 4Fe-4S dicluster domain 140 213 9.8E-11 T 13-10-2018 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 222 6.3E-79 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 SUPERFAMILY SSF46548 100 229 2.09E-37 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 Gene3D G3DSA:1.10.1060.10 100 229 1.7E-55 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_4347 444a0f8e30947f4af16a3e756f958113 230 SUPERFAMILY SSF54292 2 99 9.55E-27 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_2919 f6c3cfdd0c348aeeb551e07b0aea9d10 562 Gene3D G3DSA:3.60.40.10 288 464 3.0E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2919 f6c3cfdd0c348aeeb551e07b0aea9d10 562 SUPERFAMILY SSF81606 307 507 2.35E-6 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2919 f6c3cfdd0c348aeeb551e07b0aea9d10 562 Pfam PF13672 Protein phosphatase 2C 299 545 1.8E-48 T 13-10-2018 Thivi_1984 70dd83468ee78f2647905fa468a29f0c 53 Gene3D G3DSA:4.10.220.20 8 53 1.5E-18 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1984 70dd83468ee78f2647905fa468a29f0c 53 SUPERFAMILY SSF56918 9 45 1.18E-8 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1984 70dd83468ee78f2647905fa468a29f0c 53 Pfam PF00556 Antenna complex alpha/beta subunit 13 45 1.9E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 SUPERFAMILY SSF54862 62 165 5.31E-17 T 13-10-2018 Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Gene3D G3DSA:3.30.70.20 63 119 3.3E-11 T 13-10-2018 Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 278 1.6E-15 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Pfam PF12837 4Fe-4S binding domain 91 113 2.8E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Pfam PF00037 4Fe-4S binding domain 63 84 1.2E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Gene3D G3DSA:3.40.50.300 184 302 7.1E-13 T 13-10-2018 Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 SUPERFAMILY SSF52540 1 286 1.81E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 Gene3D G3DSA:3.40.50.300 2 62 1.1E-10 T 13-10-2018 Thivi_0862 19ea0202524350de62ec6cb1629916b4 303 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1625 75c334ce11d7ff9936db32e974880604 187 Gene3D G3DSA:1.20.120.520 1 155 2.3E-17 T 13-10-2018 Thivi_1625 75c334ce11d7ff9936db32e974880604 187 Pfam PF01814 Hemerythrin HHE cation binding domain 6 138 2.1E-8 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Thivi_0435 b445affec2538d78c8fa8910b04e34ac 262 SUPERFAMILY SSF140931 78 251 2.22E-38 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_0435 b445affec2538d78c8fa8910b04e34ac 262 Pfam PF02661 Fic/DOC family 107 197 1.1E-20 T 13-10-2018 IPR003812 Fido domain Thivi_0435 b445affec2538d78c8fa8910b04e34ac 262 Gene3D G3DSA:1.10.3290.10 14 258 2.4E-65 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 SMART SM00116 157 205 18.0 T 13-10-2018 IPR000644 CBS domain Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 SMART SM00116 75 123 4.1E-7 T 13-10-2018 IPR000644 CBS domain Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 SUPERFAMILY SSF54631 63 197 2.97E-24 T 13-10-2018 Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 Pfam PF00571 CBS domain 69 122 2.5E-11 T 13-10-2018 IPR000644 CBS domain Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 Pfam PF00571 CBS domain 150 198 0.0017 T 13-10-2018 IPR000644 CBS domain Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 Gene3D G3DSA:3.10.580.10 15 126 3.7E-14 T 13-10-2018 Thivi_1722 1e1a15b1f8315c87947b957b2857abd7 210 Gene3D G3DSA:3.10.580.10 131 205 5.9E-7 T 13-10-2018 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 283 2.0E-66 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 Gene3D G3DSA:3.40.50.1100 10 290 2.9E-108 T 13-10-2018 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 Gene3D G3DSA:3.40.50.1100 37 155 2.9E-108 T 13-10-2018 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 294 1.2E-137 T 13-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 294 3.6E-120 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Thivi_1201 b6f081a098f43db83625846ee2cbd5fa 294 SUPERFAMILY SSF53686 2 292 6.55E-91 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 224 2.6E-35 T 13-10-2018 Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 SUPERFAMILY SSF46565 339 393 2.09E-15 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 242 24.338 T 13-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 Pfam PF00226 DnaJ domain 348 393 8.8E-7 T 13-10-2018 IPR001623 DnaJ domain Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 SMART SM00271 343 394 7.1E-7 T 13-10-2018 IPR001623 DnaJ domain Thivi_4017 c613170dede4ddbc24cbbac8b7826775 394 Gene3D G3DSA:1.10.287.110 334 394 9.3E-21 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 447 194.194 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 Pfam PF00583 Acetyltransferase (GNAT) family 327 408 8.9E-7 T 13-10-2018 IPR000182 GNAT domain Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 18 447 2.3E-172 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 Gene3D G3DSA:3.40.630.30 299 447 1.0E-38 T 13-10-2018 Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 Pfam PF00696 Amino acid kinase family 36 219 1.4E-21 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 SUPERFAMILY SSF53633 17 298 2.09E-62 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 Gene3D G3DSA:3.40.1160.10 16 298 1.9E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 PIRSF PIRSF000423 9 447 2.3E-180 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Thivi_3577 994167e7fc69d470c168d3ae8d2b722a 447 SUPERFAMILY SSF55729 303 426 1.22E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_3597 9852ba267798009cbba7bda371a94966 400 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 17 28 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3597 9852ba267798009cbba7bda371a94966 400 Gene3D G3DSA:3.30.70.20 10 95 8.8E-8 T 13-10-2018 Thivi_3597 9852ba267798009cbba7bda371a94966 400 SUPERFAMILY SSF54862 12 98 9.21E-16 T 13-10-2018 Thivi_3597 9852ba267798009cbba7bda371a94966 400 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3597 9852ba267798009cbba7bda371a94966 400 Pfam PF13183 4Fe-4S dicluster domain 15 80 8.2E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3597 9852ba267798009cbba7bda371a94966 400 Pfam PF02754 Cysteine-rich domain 179 252 7.6E-4 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_3597 9852ba267798009cbba7bda371a94966 400 Pfam PF02754 Cysteine-rich domain 290 374 6.3E-11 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_3597 9852ba267798009cbba7bda371a94966 400 PIRSF PIRSF000139 1 399 9.3E-79 T 13-10-2018 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Gene3D G3DSA:3.40.50.970 1 390 3.1E-171 T 13-10-2018 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Gene3D G3DSA:3.40.50.920 612 795 9.0E-74 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Gene3D G3DSA:3.40.50.970 392 611 4.6E-93 T 13-10-2018 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 SUPERFAMILY SSF52518 10 374 2.04E-74 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Hamap MF_01403 Probable phosphoketolase. 10 795 39.686 T 13-10-2018 IPR023962 Probable phosphoketolase Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 ProSitePatterns PS60002 Phosphoketolase signature 1. 149 155 - T 13-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 SUPERFAMILY SSF52518 381 595 1.88E-24 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Pfam PF09364 XFP N-terminal domain 13 389 9.7E-188 T 13-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 405 581 3.0E-80 T 13-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 PIRSF PIRSF017245 1 795 0.0 T 13-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 Thivi_2114 cc98ce24e8044fda6a7ebce9ce9050b8 795 Pfam PF09363 XFP C-terminal domain 592 793 3.6E-90 T 13-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 Thivi_4093 140c9981eabf47ae55fe9731c0e0116f 688 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 483 670 1.5E-45 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_4093 140c9981eabf47ae55fe9731c0e0116f 688 SUPERFAMILY SSF81606 463 670 2.09E-10 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_4093 140c9981eabf47ae55fe9731c0e0116f 688 SMART SM00331 452 670 1.6E-40 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_4093 140c9981eabf47ae55fe9731c0e0116f 688 Gene3D G3DSA:3.60.40.10 424 671 8.6E-67 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_4093 140c9981eabf47ae55fe9731c0e0116f 688 Gene3D G3DSA:3.30.450.20 225 345 1.7E-5 T 13-10-2018 Thivi_2896 cf3036baae49488cf73882616899e958 216 Pfam PF00005 ABC transporter 16 154 5.9E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2896 cf3036baae49488cf73882616899e958 216 SMART SM00382 23 213 4.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2896 cf3036baae49488cf73882616899e958 216 SUPERFAMILY SSF52540 11 193 7.44E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2896 cf3036baae49488cf73882616899e958 216 Gene3D G3DSA:3.40.50.300 6 215 6.8E-40 T 13-10-2018 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 SUPERFAMILY SSF53850 106 319 1.38E-38 T 13-10-2018 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 2.4E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 SUPERFAMILY SSF46785 13 127 1.23E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 Gene3D G3DSA:3.40.190.10 179 286 4.6E-65 T 13-10-2018 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 Pfam PF03466 LysR substrate binding domain 105 315 5.9E-42 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 Gene3D G3DSA:3.40.190.10 110 308 4.6E-65 T 13-10-2018 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 6.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1255 cecd7b3290b664e16c1a627503b6f651 323 Gene3D G3DSA:1.10.10.10 14 103 5.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Gene3D G3DSA:3.30.450.20 135 258 5.9E-14 T 13-10-2018 Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SMART SM00091 21 88 5.0E-6 T 13-10-2018 IPR000014 PAS domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SMART SM00091 145 212 0.3 T 13-10-2018 IPR000014 PAS domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SMART SM00091 268 334 5.8E-5 T 13-10-2018 IPR000014 PAS domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 548 4.3E-51 T 13-10-2018 IPR000160 GGDEF domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SUPERFAMILY SSF141868 570 815 1.57E-87 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SUPERFAMILY SSF55785 279 391 4.01E-19 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Gene3D G3DSA:3.30.450.20 19 134 2.4E-9 T 13-10-2018 Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Pfam PF00563 EAL domain 570 802 1.5E-72 T 13-10-2018 IPR001633 EAL domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SUPERFAMILY SSF55785 131 258 1.61E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 389 550 1.9E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Pfam PF13426 PAS domain 279 381 1.9E-12 T 13-10-2018 IPR000014 PAS domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SMART SM00267 382 553 1.2E-66 T 13-10-2018 IPR000160 GGDEF domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 PIRSF PIRSF005925 380 822 7.0E-148 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 PIRSF PIRSF005925 12 146 0.054 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 PIRSF PIRSF005925 136 195 0.26 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 PIRSF PIRSF005925 258 384 3.0E-5 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 388 1.7E-11 T 13-10-2018 IPR000014 PAS domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SUPERFAMILY SSF55073 398 555 3.06E-54 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Gene3D G3DSA:3.30.70.270 392 566 9.6E-65 T 13-10-2018 Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Pfam PF00989 PAS fold 23 76 3.9E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SMART SM00052 563 808 1.8E-113 T 13-10-2018 IPR001633 EAL domain Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Gene3D G3DSA:3.20.20.450 567 820 9.4E-98 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 SUPERFAMILY SSF55785 21 127 1.08E-12 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Gene3D G3DSA:3.30.450.20 268 391 4.7E-21 T 13-10-2018 Thivi_2452 b816ff8e7e07b93a6df34e4eb2e7beb0 835 Pfam PF13188 PAS domain 147 197 5.1E-4 T 13-10-2018 IPR000014 PAS domain Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Gene3D G3DSA:3.40.50.720 1 202 8.1E-79 T 13-10-2018 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 SUPERFAMILY SSF48179 203 301 2.21E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 6.7E-63 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Gene3D G3DSA:1.20.5.100 203 233 3.2E-17 T 13-10-2018 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 3.5E-38 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 4.0E-27 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 PIRSF PIRSF000124 1 439 3.1E-147 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 Gene3D G3DSA:3.40.50.720 235 443 8.6E-72 T 13-10-2018 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 SUPERFAMILY SSF52413 308 434 8.37E-36 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 PIRSF PIRSF500134 1 442 1.7E-183 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 1.3E-134 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 SUPERFAMILY SSF51735 1 195 4.11E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4182 b79bb551f5050e84a71189e53b8e88ff 445 SMART SM00984 320 424 6.6E-46 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Thivi_4147 c150eb835a57b6a5bf7ef517bdfae8ff 284 Pfam PF08668 HDOD domain 17 210 2.9E-60 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_4147 c150eb835a57b6a5bf7ef517bdfae8ff 284 SMART SM00471 107 243 6.7E-7 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4147 c150eb835a57b6a5bf7ef517bdfae8ff 284 TIGRFAM TIGR00277 HDIG: HDIG domain 112 211 4.1E-9 T 13-10-2018 IPR006675 HDIG domain Thivi_4147 c150eb835a57b6a5bf7ef517bdfae8ff 284 SUPERFAMILY SSF109604 10 269 1.57E-65 T 13-10-2018 Thivi_4147 c150eb835a57b6a5bf7ef517bdfae8ff 284 Gene3D G3DSA:1.10.3210.10 4 280 3.9E-73 T 13-10-2018 Thivi_4403 afbf3f39c36d94e1f23d10c121bc650e 140 Pfam PF06252 Protein of unknown function (DUF1018) 17 132 1.4E-38 T 13-10-2018 IPR009363 Bacteriophage Mu, Gp16 Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 Gene3D G3DSA:3.40.190.10 113 289 1.5E-100 T 13-10-2018 Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 34 346 9.3E-97 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 PIRSF PIRSF002756 7 349 1.1E-98 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 SUPERFAMILY SSF53850 33 348 2.38E-80 T 13-10-2018 Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 Pfam PF12849 PBP superfamily domain 29 312 2.8E-52 T 13-10-2018 IPR024370 PBP domain Thivi_0967 9ad6c8b8894b9d3ebb2d29687955b0eb 349 Gene3D G3DSA:3.40.190.10 36 335 1.5E-100 T 13-10-2018 Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 PIRSF PIRSF000027 10 153 1.5E-28 T 13-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 Pfam PF01322 Cytochrome C' 30 151 4.8E-32 T 13-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 PRINTS PR00608 Class II cytochrome C signature 140 151 1.3E-6 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 PRINTS PR00608 Class II cytochrome C signature 117 140 1.3E-6 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 Gene3D G3DSA:1.20.120.10 23 153 7.0E-34 T 13-10-2018 Thivi_0090 2fc269039efe813eca15704af28f9a3c 154 SUPERFAMILY SSF47175 26 152 5.5E-36 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 PIRSF PIRSF005457 1 256 1.1E-86 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 256 41.632 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 Gene3D G3DSA:3.60.15.10 1 256 1.1E-81 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 SUPERFAMILY SSF56281 2 255 5.5E-61 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 255 1.1E-93 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 169 255 4.5E-22 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 Pfam PF00753 Metallo-beta-lactamase superfamily 14 168 3.3E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_1567 e1c51bd6609a8ba122848dcdc7ff16b1 258 SMART SM00849 12 168 6.1E-25 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 SUPERFAMILY SSF55811 17 155 4.47E-32 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 Gene3D G3DSA:3.90.79.10 16 155 4.0E-32 T 13-10-2018 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 Gene3D G3DSA:3.20.20.70 156 343 5.2E-49 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 Pfam PF02581 Thiamine monophosphate synthase 161 338 1.1E-41 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 SUPERFAMILY SSF51391 144 341 1.57E-48 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 Pfam PF00293 NUDIX domain 21 152 5.2E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 PRINTS PR00502 NUDIX hydrolase family signature 46 60 4.0E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 PRINTS PR00502 NUDIX hydrolase family signature 60 75 4.0E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Thivi_2307 e83061e7183bb4ff312e89665ccd2ec3 343 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 Gene3D G3DSA:3.30.420.40 1 197 3.4E-54 T 13-10-2018 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 392 7.6E-103 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 147.04 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 205 222 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 205 226 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 321 337 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 299 312 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 176 189 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 373 385 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PRINTS PR00471 Acetate kinase family signature 5 16 3.2E-38 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 SUPERFAMILY SSF53067 163 394 7.18E-74 T 13-10-2018 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 SUPERFAMILY SSF53067 4 198 3.28E-53 T 13-10-2018 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 Pfam PF00871 Acetokinase family 5 386 8.6E-99 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 Gene3D G3DSA:3.30.420.40 199 395 3.1E-69 T 13-10-2018 Thivi_0977 814a7a48dbd5915cc7c7a063df51be68 395 PIRSF PIRSF000722 1 395 8.2E-131 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 59 268 3.9E-69 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 Gene3D G3DSA:1.25.40.590 57 214 3.8E-52 T 13-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 Gene3D G3DSA:3.30.1330.60 302 447 6.6E-38 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 Pfam PF00691 OmpA family 341 437 6.6E-14 T 13-10-2018 IPR006665 OmpA-like domain Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 Pfam PF09850 Type VI secretion system protein DotU 60 262 6.8E-68 T 13-10-2018 IPR017732 Type IV / VI secretion system, DotU Thivi_2301 4f9204b8fa17d2deb4f7cd6daa89dd0d 461 SUPERFAMILY SSF103088 329 443 1.16E-25 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 Gene3D G3DSA:3.30.70.270 130 306 1.0E-55 T 13-10-2018 Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 SMART SM00448 9 122 3.9E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 304 2.3E-50 T 13-10-2018 IPR000160 GGDEF domain Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 Pfam PF00072 Response regulator receiver domain 11 116 6.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 SUPERFAMILY SSF55073 144 305 1.96E-47 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 SMART SM00267 128 305 3.0E-59 T 13-10-2018 IPR000160 GGDEF domain Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 SUPERFAMILY SSF52172 10 140 7.97E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 301 9.2E-46 T 13-10-2018 IPR000160 GGDEF domain Thivi_4018 7530b046c06b4c0d2885a29006b32dc5 307 Gene3D G3DSA:3.40.50.2300 9 129 2.2E-33 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 3.2E-23 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 3.2E-23 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.2E-23 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 3.2E-23 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 Gene3D G3DSA:3.40.50.720 143 250 7.2E-20 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 SUPERFAMILY SSF46548 2 154 7.85E-41 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 SUPERFAMILY SSF51971 142 406 1.12E-65 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 469 4.4E-26 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 26 131 6.6E-24 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 2.0E-217 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 Gene3D G3DSA:3.50.50.60 251 405 2.5E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 SUPERFAMILY SSF51971 380 483 5.41E-10 T 13-10-2018 Thivi_2861 50123dcda87c8b4729fa82d6df78c7fa 488 Gene3D G3DSA:1.10.1060.10 9 142 1.8E-23 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 Gene3D G3DSA:3.30.200.20 67 154 5.7E-21 T 13-10-2018 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 SUPERFAMILY SSF56112 72 382 1.75E-61 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 SMART SM00220 75 380 1.8E-46 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 Gene3D G3DSA:1.10.510.10 172 388 4.0E-41 T 13-10-2018 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 206 218 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 Pfam PF00069 Protein kinase domain 77 366 7.7E-37 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_0749 d2e3facbb50438b28ca8e2d2c4507267 764 Gene3D G3DSA:3.30.450.20 552 659 9.5E-12 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 384 390 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 140 687 5.7E-146 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 SUPERFAMILY SSF56784 380 685 1.54E-46 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 Pfam PF00122 E1-E2 ATPase 193 362 3.6E-32 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 165 668 4.9E-64 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 Gene3D G3DSA:2.70.150.20 184 294 7.4E-27 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 521 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 605 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 621 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 240 254 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 543 2.6E-24 T 13-10-2018 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 Gene3D G3DSA:3.40.1110.10 393 517 4.2E-80 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 SUPERFAMILY SSF81653 193 289 8.63E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 Gene3D G3DSA:3.40.50.1000 363 635 4.2E-80 T 13-10-2018 IPR023214 HAD superfamily Thivi_1332 e31ec1ef22bcbe1719ac13cf8e84dc41 701 Pfam PF00702 haloacid dehalogenase-like hydrolase 378 600 7.5E-33 T 13-10-2018 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 SUPERFAMILY SSF53850 100 305 4.67E-43 T 13-10-2018 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 73 1.3E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 Pfam PF03466 LysR substrate binding domain 98 304 7.2E-43 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 Gene3D G3DSA:3.40.190.10 176 276 6.4E-78 T 13-10-2018 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 SUPERFAMILY SSF46785 10 122 1.07E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 Gene3D G3DSA:1.10.10.10 6 93 1.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 Gene3D G3DSA:3.40.190.10 102 303 6.4E-78 T 13-10-2018 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_1404 2266740c2fa0a04af6f34e9591bdba4c 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.0E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_4567 4cfd38be79d0b216ab3e57b65fa4d451 352 Pfam PF00361 Proton-conducting membrane transporter 22 222 8.6E-29 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3554 10d8bcbaf3956ac3f1401b4e88452c5a 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 319 4.1E-64 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Thivi_3554 10d8bcbaf3956ac3f1401b4e88452c5a 363 Gene3D G3DSA:3.40.190.10 153 324 1.7E-132 T 13-10-2018 Thivi_3554 10d8bcbaf3956ac3f1401b4e88452c5a 363 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 25 5.6E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_3554 10d8bcbaf3956ac3f1401b4e88452c5a 363 Gene3D G3DSA:3.40.190.170 33 337 1.7E-132 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Thivi_3554 10d8bcbaf3956ac3f1401b4e88452c5a 363 PIRSF PIRSF039026 1 357 1.8E-132 T 13-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Thivi_0228 f0f08e04858f5dfafcb9d70aeb592dc5 503 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 497 1.9E-104 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Thivi_0228 f0f08e04858f5dfafcb9d70aeb592dc5 503 SUPERFAMILY SSF51445 3 497 1.26E-167 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_0228 f0f08e04858f5dfafcb9d70aeb592dc5 503 Pfam PF02446 4-alpha-glucanotransferase 9 476 2.0E-152 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Thivi_0228 f0f08e04858f5dfafcb9d70aeb592dc5 503 Gene3D G3DSA:3.20.20.80 1 498 2.9E-187 T 13-10-2018 Thivi_1247 fe1e00b7599ad5223dd0432128cf9156 540 SUPERFAMILY SSF52151 7 205 7.59E-25 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_1247 fe1e00b7599ad5223dd0432128cf9156 540 Gene3D G3DSA:3.40.1090.10 102 248 7.3E-9 T 13-10-2018 Thivi_1247 fe1e00b7599ad5223dd0432128cf9156 540 Gene3D G3DSA:3.40.1090.20 9 98 5.2E-9 T 13-10-2018 Thivi_1247 fe1e00b7599ad5223dd0432128cf9156 540 Pfam PF01734 Patatin-like phospholipase 12 194 7.0E-18 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 ProSitePatterns PS00455 Putative AMP-binding domain signature. 130 141 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 Gene3D G3DSA:3.40.50.12780 18 359 1.0E-61 T 13-10-2018 Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 Pfam PF13193 AMP-binding enzyme C-terminal domain 376 446 1.7E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 Gene3D G3DSA:3.30.300.30 365 459 5.7E-18 T 13-10-2018 Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 SUPERFAMILY SSF56801 31 457 3.14E-82 T 13-10-2018 Thivi_2398 5d8cf66f5e83925397cb75f2b1e940cb 461 Pfam PF00501 AMP-binding enzyme 122 363 1.2E-38 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_0957 22df29434aa83de87dd2be387e962bf8 189 Pfam PF07603 Protein of unknown function (DUF1566) 57 178 3.1E-23 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 Pfam PF11760 Cobalamin synthesis G N-terminal 51 122 1.8E-8 T 13-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 SUPERFAMILY SSF159672 10 123 3.4E-11 T 13-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 142 388 5.9E-89 T 13-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 SUPERFAMILY SSF53790 139 388 1.06E-54 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 Gene3D G3DSA:3.40.50.11220 7 123 5.8E-6 T 13-10-2018 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 141 352 1.0E-39 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 Gene3D G3DSA:3.30.950.10 255 390 1.0E-54 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_1681 a251c7fa3b6b65965443417f039d2cd4 391 Gene3D G3DSA:3.40.1010.10 136 254 1.1E-26 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_1793 eddac7fefaa8b03ef96ac13304d008fe 425 Pfam PF13103 TonB C terminal 337 423 2.7E-16 T 13-10-2018 Thivi_1793 eddac7fefaa8b03ef96ac13304d008fe 425 Gene3D G3DSA:3.30.1150.10 326 425 2.1E-23 T 13-10-2018 Thivi_1793 eddac7fefaa8b03ef96ac13304d008fe 425 TIGRFAM TIGR02794 tolA_full: protein TolA 171 425 4.2E-33 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Thivi_1793 eddac7fefaa8b03ef96ac13304d008fe 425 TIGRFAM TIGR02794 tolA_full: protein TolA 10 210 6.9E-18 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Thivi_1793 eddac7fefaa8b03ef96ac13304d008fe 425 SUPERFAMILY SSF74653 326 425 1.7E-14 T 13-10-2018 Thivi_0476 c1f58d6457600cbab9ccb564125f40bb 247 SMART SM00382 26 212 9.3E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0476 c1f58d6457600cbab9ccb564125f40bb 247 Gene3D G3DSA:3.40.50.300 2 245 1.0E-71 T 13-10-2018 Thivi_0476 c1f58d6457600cbab9ccb564125f40bb 247 Pfam PF00005 ABC transporter 17 162 4.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0476 c1f58d6457600cbab9ccb564125f40bb 247 SUPERFAMILY SSF52540 2 238 7.1E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 PIRSF PIRSF001338 7 170 4.7E-71 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 Gene3D G3DSA:3.40.50.7700 2 173 1.2E-73 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 SMART SM01001 10 159 6.7E-98 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 12 163 33.799 T 13-10-2018 IPR033747 Class I PurE Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 12 166 2.2E-65 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 SUPERFAMILY SSF52255 10 169 6.8E-67 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Thivi_3319 b2b8218f1032f6bacc600ac18c1165c8 173 Pfam PF00731 AIR carboxylase 12 156 1.2E-66 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Thivi_0500 cbc7654567b71ff442f16de215ced42d 285 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 216 271 2.0E-10 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 Thivi_0500 cbc7654567b71ff442f16de215ced42d 285 Gene3D G3DSA:3.60.21.10 11 283 3.4E-66 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_0500 cbc7654567b71ff442f16de215ced42d 285 Pfam PF00149 Calcineurin-like phosphoesterase 27 216 7.7E-16 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_0500 cbc7654567b71ff442f16de215ced42d 285 SUPERFAMILY SSF56300 27 275 2.89E-53 T 13-10-2018 Thivi_0500 cbc7654567b71ff442f16de215ced42d 285 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 27 271 37.457 T 13-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 Gene3D G3DSA:3.10.290.10 6 75 1.4E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 Gene3D G3DSA:3.30.2350.10 88 319 3.7E-72 T 13-10-2018 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 SUPERFAMILY SSF55120 81 317 2.88E-76 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 Pfam PF01479 S4 domain 23 55 3.5E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 SUPERFAMILY SSF55174 22 72 5.0E-9 T 13-10-2018 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 Pfam PF00849 RNA pseudouridylate synthase 95 244 2.0E-34 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3363 b6e823b95676bcb4ca146879f8aba8ea 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 314 2.5E-94 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Thivi_3122 10920b70c869d04493861d9420e09711 314 Gene3D G3DSA:3.40.50.970 13 314 3.6E-70 T 13-10-2018 Thivi_3122 10920b70c869d04493861d9420e09711 314 SUPERFAMILY SSF52518 10 296 1.9E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3122 10920b70c869d04493861d9420e09711 314 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 91 272 1.1E-19 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 Gene3D G3DSA:2.40.170.20 158 623 1.3E-121 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 147 5.7E-30 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 Gene3D G3DSA:2.170.130.10 28 152 2.2E-38 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 Pfam PF00593 TonB dependent receptor 220 621 4.8E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 9 623 9.5E-194 T 13-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 Thivi_0715 383e1899241ee959c28cd63897e9f1cb 628 SUPERFAMILY SSF56935 30 623 4.4E-126 T 13-10-2018 Thivi_1041 7663b3953ef28994339337c33dce5a59 154 Gene3D G3DSA:1.20.1220.20 2 154 7.1E-27 T 13-10-2018 Thivi_1041 7663b3953ef28994339337c33dce5a59 154 Pfam PF01724 Domain of unknown function DUF29 7 152 2.8E-50 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_0828 18d70f92a2530facfb5521a7582208ba 205 Pfam PF08241 Methyltransferase domain 46 136 2.0E-14 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_0828 18d70f92a2530facfb5521a7582208ba 205 Gene3D G3DSA:3.40.50.150 2 205 1.1E-56 T 13-10-2018 Thivi_0828 18d70f92a2530facfb5521a7582208ba 205 SUPERFAMILY SSF53335 9 171 2.28E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 SUPERFAMILY SSF48179 160 283 2.95E-22 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 Gene3D G3DSA:3.40.50.720 1 154 1.1E-40 T 13-10-2018 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 4.3E-30 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 SUPERFAMILY SSF51735 1 160 7.99E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 Gene3D G3DSA:1.10.1040.10 159 288 1.8E-21 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 PIRSF PIRSF000103 1 288 3.7E-70 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 282 2.6E-14 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Thivi_3087 2957d8417b13d7ef0a03f95ea8576df7 288 ProSitePatterns PS00732 Ribosomal protein S16 signature. 15 24 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 Pfam PF01909 Nucleotidyltransferase domain 26 89 2.0E-9 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 SUPERFAMILY SSF53474 118 415 1.62E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 SUPERFAMILY SSF81301 18 95 3.93E-13 T 13-10-2018 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 Gene3D G3DSA:3.40.50.1820 118 429 1.6E-102 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 Pfam PF00561 alpha/beta hydrolase fold 155 414 7.6E-32 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 126 428 7.6E-128 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 223 237 4.4E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 154 162 4.4E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 180 191 4.4E-13 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Thivi_2071 cf9670d851552f3956cf76c9bd1d8c7b 433 Gene3D G3DSA:3.30.460.10 7 105 1.4E-18 T 13-10-2018 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 41.547 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 3.3E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 4.8E-76 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 SUPERFAMILY SSF51246 330 424 9.42E-32 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 SMART SM01210 330 423 3.5E-53 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.1E-167 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 SUPERFAMILY SSF52440 1 103 9.5E-36 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 SUPERFAMILY SSF56059 104 319 6.89E-63 T 13-10-2018 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Gene3D G3DSA:3.30.470.20 191 329 1.1E-54 T 13-10-2018 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.2E-34 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Gene3D G3DSA:3.90.600.10 330 430 3.6E-33 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 SMART SM01209 103 296 1.8E-132 T 13-10-2018 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Gene3D G3DSA:3.40.50.20 2 95 1.2E-36 T 13-10-2018 Thivi_1115 2f8d6842bf2817aa2293e950cc02d6ce 433 Gene3D G3DSA:3.30.1490.20 121 190 1.0E-25 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_3580 4f35d0f1110aed74d309474c019c26c1 165 Gene3D G3DSA:3.90.1570.10 1 162 1.1E-14 T 13-10-2018 Thivi_3580 4f35d0f1110aed74d309474c019c26c1 165 SUPERFAMILY SSF52980 9 148 1.23E-18 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3580 4f35d0f1110aed74d309474c019c26c1 165 Pfam PF05685 Putative restriction endonuclease 13 152 1.1E-14 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 Pfam PF00092 von Willebrand factor type A domain 90 232 2.3E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 SMART SM00240 454 505 6.6E-8 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 Gene3D G3DSA:3.40.50.410 81 275 5.4E-21 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 SUPERFAMILY SSF53300 90 240 4.77E-17 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 Gene3D G3DSA:2.60.200.20 409 527 2.5E-24 T 13-10-2018 Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 SMART SM00327 86 253 3.0E-14 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 437 526 3.6E-16 T 13-10-2018 IPR032030 YscD, cytoplasmic domain Thivi_2038 1d57078c27845844d4d8a7fe03b7d90d 531 SUPERFAMILY SSF49879 416 525 1.63E-21 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_0714 8648d09d000761037e6c0ff2b3f1b6fe 80 SUPERFAMILY SSF89447 6 71 6.98E-15 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_0714 8648d09d000761037e6c0ff2b3f1b6fe 80 Gene3D G3DSA:2.10.260.10 1 79 6.0E-22 T 13-10-2018 Thivi_0714 8648d09d000761037e6c0ff2b3f1b6fe 80 SMART SM00966 7 52 2.4E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_2115 2ff79d056b31b67f3978c032f24c8b62 202 Gene3D G3DSA:3.90.1570.10 4 186 3.3E-20 T 13-10-2018 Thivi_2115 2ff79d056b31b67f3978c032f24c8b62 202 Pfam PF05685 Putative restriction endonuclease 13 169 1.9E-34 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_2115 2ff79d056b31b67f3978c032f24c8b62 202 SUPERFAMILY SSF52980 4 181 3.38E-25 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2517 af9ff051c01b51270502428b9dfb7859 200 SMART SM00382 33 193 6.3E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2517 af9ff051c01b51270502428b9dfb7859 200 Gene3D G3DSA:3.40.50.300 3 199 1.5E-38 T 13-10-2018 Thivi_2517 af9ff051c01b51270502428b9dfb7859 200 Pfam PF00005 ABC transporter 27 147 7.6E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2517 af9ff051c01b51270502428b9dfb7859 200 SUPERFAMILY SSF52540 5 192 2.09E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Gene3D G3DSA:1.10.486.10 378 543 1.5E-118 T 13-10-2018 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 4 665 5.8E-288 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Gene3D G3DSA:3.40.50.300 5 267 2.2E-90 T 13-10-2018 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Pfam PF13361 UvrD-like helicase C-terminal domain 272 612 1.6E-69 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 666 38.651 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Gene3D G3DSA:3.40.50.300 275 631 1.5E-118 T 13-10-2018 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Gene3D G3DSA:1.10.10.160 109 182 2.2E-90 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 266 1.1E-69 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Thivi_0668 e79797344ca0cc6c1fc4cef46cfbe970 668 SUPERFAMILY SSF52540 2 638 1.52E-160 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0792 e8a8bae1dec6c9bcf35e3bba6ea40a30 353 Pfam PF05598 Transposase domain (DUF772) 14 75 2.0E-7 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Thivi_3742 b5c262b9cf4d9bf932e3cc1ab44cb372 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 1.8E-19 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Thivi_3742 b5c262b9cf4d9bf932e3cc1ab44cb372 101 SUPERFAMILY SSF54909 1 98 2.42E-29 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Thivi_3742 b5c262b9cf4d9bf932e3cc1ab44cb372 101 Gene3D G3DSA:3.30.70.100 1 101 6.7E-31 T 13-10-2018 Thivi_2138 f67316c87f12b745f577ccbec63c41c2 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 5.9E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2138 f67316c87f12b745f577ccbec63c41c2 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2138 f67316c87f12b745f577ccbec63c41c2 150 SUPERFAMILY SSF54523 12 136 1.41E-6 T 13-10-2018 Thivi_2138 f67316c87f12b745f577ccbec63c41c2 150 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 9 130 1.1E-20 T 13-10-2018 IPR013362 Pilus modification type IV, PilV Thivi_2138 f67316c87f12b745f577ccbec63c41c2 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 7.4E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 Gene3D G3DSA:3.40.30.10 14 187 1.9E-53 T 13-10-2018 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.6E-15 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 PRINTS PR01011 Glutathione peroxidase family signature 47 64 2.6E-15 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 PRINTS PR01011 Glutathione peroxidase family signature 82 98 2.6E-15 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 ProSitePatterns PS00460 Glutathione peroxidases active site. 49 64 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 Pfam PF00255 Glutathione peroxidase 29 135 8.7E-33 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 SUPERFAMILY SSF52833 26 181 2.75E-50 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0890 71e60ea0d5178fdadb9cef38f44ca7e5 187 PIRSF PIRSF000303 1 185 8.0E-57 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 Gene3D G3DSA:3.40.50.20 1 114 1.7E-38 T 13-10-2018 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.155 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 SUPERFAMILY SSF56059 98 288 6.89E-48 T 13-10-2018 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 Gene3D G3DSA:3.30.1490.20 115 181 2.3E-26 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 Gene3D G3DSA:3.30.470.80 182 296 2.3E-43 T 13-10-2018 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 Pfam PF08443 RimK-like ATP-grasp domain 97 285 2.2E-68 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Thivi_3219 da1b7d8d93289d84ba153b033eea2343 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 285 5.9E-84 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Thivi_2395 a28b3d4739fc07a0ea928fd04f6697a0 146 Gene3D G3DSA:3.30.2130.10 1 143 1.8E-47 T 13-10-2018 Thivi_2395 a28b3d4739fc07a0ea928fd04f6697a0 146 SUPERFAMILY SSF55021 2 68 2.9E-12 T 13-10-2018 Thivi_2395 a28b3d4739fc07a0ea928fd04f6697a0 146 SUPERFAMILY SSF55021 72 141 2.08E-14 T 13-10-2018 Thivi_2395 a28b3d4739fc07a0ea928fd04f6697a0 146 Pfam PF01842 ACT domain 72 121 3.2E-7 T 13-10-2018 IPR002912 ACT domain Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 SMART SM00316 4 72 3.0E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 Gene3D G3DSA:2.40.50.140 1 72 1.2E-36 T 13-10-2018 Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 7.4E-29 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.0E-39 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 SUPERFAMILY SSF50249 1 70 4.29E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0947 e3c0e87a2ec106084f17bd6c410b7233 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.549 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Thivi_0101 3d72fbcf2da63c58675052359c7223ee 118 Pfam PF02635 DsrE/DsrF-like family 1 118 3.7E-22 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Thivi_0101 3d72fbcf2da63c58675052359c7223ee 118 SUPERFAMILY SSF75169 1 118 9.71E-27 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0101 3d72fbcf2da63c58675052359c7223ee 118 Gene3D G3DSA:3.40.1260.10 1 118 8.8E-29 T 13-10-2018 IPR027396 DsrEFH-like Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 Pfam PF04002 RadC-like JAB domain 103 223 9.6E-44 T 13-10-2018 IPR025657 RadC-like JAB domain Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.4E-75 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 SUPERFAMILY SSF102712 119 199 2.75E-6 T 13-10-2018 Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 Gene3D G3DSA:3.40.140.10 101 224 5.8E-42 T 13-10-2018 Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Thivi_2719 7beea4dac592bbad24cace3f5cef7dc0 224 SUPERFAMILY SSF47781 18 91 1.58E-9 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 Gene3D G3DSA:3.40.1500.10 2 303 1.6E-127 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 SUPERFAMILY SSF102886 5 303 1.96E-131 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PIRSF PIRSF000166 1 304 6.5E-120 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 278 55.602 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 Pfam PF01218 Coproporphyrinogen III oxidase 10 303 7.7E-123 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 49 70 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 263 289 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 32 48 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 91 115 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 235 262 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 126 148 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_3474 c6623f2e00f3ff5aaa91a8f73ea23591 313 PRINTS PR00073 Coprogen oxidase signature 163 192 5.9E-84 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Thivi_4594 63856ca1c7c0306cef105b446444d39a 299 Hamap MF_00361 NAD kinase [nadK]. 5 288 32.937 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Thivi_4594 63856ca1c7c0306cef105b446444d39a 299 Gene3D G3DSA:3.40.50.10330 24 288 3.2E-93 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Thivi_4594 63856ca1c7c0306cef105b446444d39a 299 Gene3D G3DSA:2.60.200.30 128 265 3.2E-93 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Thivi_4594 63856ca1c7c0306cef105b446444d39a 299 Pfam PF01513 ATP-NAD kinase 62 272 2.5E-62 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Thivi_4594 63856ca1c7c0306cef105b446444d39a 299 SUPERFAMILY SSF111331 7 291 3.79E-83 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Thivi_0024 803cc233640df99e3be1f5ac4511ca58 337 Gene3D G3DSA:3.40.50.300 6 172 4.4E-51 T 13-10-2018 Thivi_0024 803cc233640df99e3be1f5ac4511ca58 337 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 16 206 1.1E-56 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0024 803cc233640df99e3be1f5ac4511ca58 337 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 214 325 3.7E-14 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0024 803cc233640df99e3be1f5ac4511ca58 337 Pfam PF13177 DNA polymerase III, delta subunit 14 171 6.2E-39 T 13-10-2018 Thivi_0024 803cc233640df99e3be1f5ac4511ca58 337 SUPERFAMILY SSF52540 8 208 2.2E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 6.9E-82 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.817 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.6E-41 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 SUPERFAMILY SSF53223 1 122 9.59E-41 T 13-10-2018 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 SUPERFAMILY SSF51735 123 281 1.47E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.1E-66 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 Gene3D G3DSA:3.40.50.720 6 259 4.2E-107 T 13-10-2018 Thivi_3625 99af9f2fa8dd6534d33dacfac7196873 287 Gene3D G3DSA:3.40.50.10860 8 276 4.2E-107 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Gene3D G3DSA:3.40.50.300 341 519 1.0E-64 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Gene3D G3DSA:1.10.8.60 520 612 4.8E-28 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 34 228 2.8E-30 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PIRSF PIRSF001174 20 800 1.7E-289 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 748 4.1E-51 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 384 403 4.1E-51 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 700 719 4.1E-51 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 752 770 4.1E-51 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 621 637 4.1E-51 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Gene3D G3DSA:3.30.230.10 615 801 3.4E-74 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Gene3D G3DSA:1.20.58.1480 148 271 1.6E-33 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 598 796 4.7E-78 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Hamap MF_01973 Lon protease [lon]. 35 798 62.594 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 SUPERFAMILY SSF54211 621 797 7.21E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 SMART SM00464 34 229 2.9E-39 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 SUPERFAMILY SSF52540 337 612 9.57E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Gene3D G3DSA:2.30.130.40 25 141 2.5E-17 T 13-10-2018 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 SMART SM00382 376 521 2.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 703 711 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 SUPERFAMILY SSF88697 34 228 4.22E-24 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 TIGRFAM TIGR00763 lon: endopeptidase La 37 797 1.4E-289 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Thivi_2891 2fae95e4f49df82e9a48675e959e5cd3 801 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 380 518 3.1E-23 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 SUPERFAMILY SSF53720 12 423 6.41E-117 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 Gene3D G3DSA:3.40.309.10 233 381 2.8E-161 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 PIRSF PIRSF000151 6 424 5.0E-175 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 Pfam PF00171 Aldehyde dehydrogenase family 310 380 2.2E-5 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 Pfam PF00171 Aldehyde dehydrogenase family 18 290 1.1E-13 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 330 351 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 12 423 41.551 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 20 413 1.4E-146 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Thivi_0983 02feb8db294c48aacc0e4f693e65823a 424 Gene3D G3DSA:3.40.605.10 19 420 2.8E-161 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 SUPERFAMILY SSF118215 8 414 3.79E-115 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 Pfam PF00375 Sodium:dicarboxylate symporter family 8 413 5.3E-128 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 306 332 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 341 360 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 368 388 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 PRINTS PR00173 Glutamate-aspartate symporter signature 239 258 3.0E-66 T 13-10-2018 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 Gene3D G3DSA:1.10.3860.10 1 424 5.1E-139 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_3484 dd2723cc6cac2f02f3e15573f01b5d5c 432 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 309 332 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Thivi_1604 2288a339a9c630f336f01a66cb70d73d 212 Pfam PF00072 Response regulator receiver domain 15 135 8.4E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1604 2288a339a9c630f336f01a66cb70d73d 212 Gene3D G3DSA:3.40.50.12740 13 207 1.2E-39 T 13-10-2018 Thivi_1604 2288a339a9c630f336f01a66cb70d73d 212 SUPERFAMILY SSF46894 160 205 1.87E-5 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_1604 2288a339a9c630f336f01a66cb70d73d 212 SUPERFAMILY SSF52172 12 154 5.27E-24 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1604 2288a339a9c630f336f01a66cb70d73d 212 SMART SM00448 13 135 2.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 SUPERFAMILY SSF52540 253 476 3.83E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0286 dab5782566a69899c5843583a69d07c1 569 Gene3D G3DSA:3.40.50.300 10 245 2.4E-51 T 13-10-2018 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 Gene3D G3DSA:3.40.50.300 246 491 7.8E-49 T 13-10-2018 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 PIRSF PIRSF039117 6 511 1.0E-135 T 13-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 SMART SM00382 34 206 2.7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0286 dab5782566a69899c5843583a69d07c1 569 SMART SM00382 275 401 0.21 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0286 dab5782566a69899c5843583a69d07c1 569 SUPERFAMILY SSF52540 16 240 3.55E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0286 dab5782566a69899c5843583a69d07c1 569 PRINTS PR01874 DNA repair protein radA signature 309 326 2.2E-5 T 13-10-2018 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 PRINTS PR01874 DNA repair protein radA signature 267 295 2.2E-5 T 13-10-2018 Thivi_0286 dab5782566a69899c5843583a69d07c1 569 Pfam PF06745 KaiC 257 474 3.0E-30 T 13-10-2018 IPR014774 KaiC-like domain Thivi_0286 dab5782566a69899c5843583a69d07c1 569 Pfam PF06745 KaiC 18 243 7.4E-60 T 13-10-2018 IPR014774 KaiC-like domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 SUPERFAMILY SSF54631 61 199 1.89E-33 T 13-10-2018 Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 SUPERFAMILY SSF56176 201 283 2.21E-23 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 Gene3D G3DSA:3.30.465.10 199 280 9.9E-30 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 SMART SM00116 74 123 4.4E-4 T 13-10-2018 IPR000644 CBS domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 SMART SM00116 138 186 2.7 T 13-10-2018 IPR000644 CBS domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 Gene3D G3DSA:3.10.580.10 47 194 7.7E-52 T 13-10-2018 Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 Pfam PF03471 Transporter associated domain 204 278 5.5E-22 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 SMART SM01091 202 280 1.0E-29 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 Pfam PF00571 CBS domain 140 186 8.6E-4 T 13-10-2018 IPR000644 CBS domain Thivi_1850 c094f9f6bcab3407fd97cfc207839ae5 295 Pfam PF00571 CBS domain 65 122 5.8E-10 T 13-10-2018 IPR000644 CBS domain Thivi_0886 957b2be21e06c9ec8409fb8f90da8428 369 Pfam PF16363 GDP-mannose 4,6 dehydratase 12 336 1.6E-32 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_0886 957b2be21e06c9ec8409fb8f90da8428 369 SUPERFAMILY SSF51735 2 350 7.8E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0886 957b2be21e06c9ec8409fb8f90da8428 369 Gene3D G3DSA:3.40.50.720 2 188 5.4E-47 T 13-10-2018 Thivi_0886 957b2be21e06c9ec8409fb8f90da8428 369 Gene3D G3DSA:3.90.25.10 189 365 2.2E-57 T 13-10-2018 Thivi_0886 957b2be21e06c9ec8409fb8f90da8428 369 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 5 362 5.1E-145 T 13-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 Thivi_1109 bcd5b3515529688e64f674a1806881ee 200 Pfam PF05685 Putative restriction endonuclease 19 186 8.3E-32 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_1109 bcd5b3515529688e64f674a1806881ee 200 Gene3D G3DSA:3.90.1570.10 9 192 1.8E-34 T 13-10-2018 Thivi_1109 bcd5b3515529688e64f674a1806881ee 200 SUPERFAMILY SSF52980 12 171 1.18E-38 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SUPERFAMILY SSF55073 278 436 2.75E-51 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SUPERFAMILY SSF141868 449 697 1.31E-77 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SMART SM00052 444 688 2.5E-90 T 13-10-2018 IPR001633 EAL domain Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Pfam PF00672 HAMP domain 216 260 2.3E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Gene3D G3DSA:1.20.1480.50 175 269 6.3E-14 T 13-10-2018 Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Gene3D G3DSA:3.30.70.270 270 447 2.3E-63 T 13-10-2018 Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SMART SM00267 262 434 1.4E-67 T 13-10-2018 IPR000160 GGDEF domain Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SMART SM00304 215 267 2.9E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 431 1.9E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Pfam PF00563 EAL domain 452 683 2.2E-64 T 13-10-2018 IPR001633 EAL domain Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Gene3D G3DSA:3.20.20.450 448 705 4.2E-88 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 273 428 3.0E-52 T 13-10-2018 IPR000160 GGDEF domain Thivi_1259 11eef77e6b91095e91ff9c2b7ca4d267 709 SUPERFAMILY SSF158472 216 261 4.05E-9 T 13-10-2018 Thivi_0080 ba9015fbbe96c7cf038ad4d70a1d83e8 96 Pfam PF10387 Protein of unknown function (DUF2442) 3 71 5.6E-14 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_0080 ba9015fbbe96c7cf038ad4d70a1d83e8 96 SUPERFAMILY SSF143880 2 73 1.12E-13 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 Gene3D G3DSA:3.40.50.720 19 317 5.1E-112 T 13-10-2018 Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 SUPERFAMILY SSF52283 20 140 1.47E-23 T 13-10-2018 Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 319 6.3E-24 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 Gene3D G3DSA:3.40.50.720 101 288 5.1E-112 T 13-10-2018 Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 7.5E-53 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Thivi_1421 da195ccc18599b51ec1c9a678e3157a5 320 SUPERFAMILY SSF51735 105 290 3.04E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Pfam PF00563 EAL domain 196 429 6.3E-72 T 13-10-2018 IPR001633 EAL domain Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Pfam PF04940 Sensors of blue-light using FAD 455 546 3.1E-26 T 13-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SMART SM00267 7 178 2.9E-38 T 13-10-2018 IPR000160 GGDEF domain Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SMART SM00052 188 434 3.8E-102 T 13-10-2018 IPR001633 EAL domain Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SUPERFAMILY SSF54975 455 555 4.58E-30 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 16 172 1.4E-26 T 13-10-2018 IPR000160 GGDEF domain Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SUPERFAMILY SSF141868 194 440 9.42E-82 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Gene3D G3DSA:3.30.70.270 19 188 3.5E-43 T 13-10-2018 Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 17 172 9.8E-35 T 13-10-2018 IPR000160 GGDEF domain Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Gene3D G3DSA:3.20.20.450 189 440 2.0E-92 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 Gene3D G3DSA:3.30.70.3200 449 569 1.3E-32 T 13-10-2018 Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SUPERFAMILY SSF55073 23 180 5.81E-37 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2552 2442f53ae4fe00c777e2512310786d8d 597 SMART SM01034 455 547 2.9E-30 T 13-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 SUPERFAMILY SSF53300 96 276 2.22E-15 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 SMART SM00327 92 263 0.0043 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 Pfam PF00515 Tetratricopeptide repeat 411 439 7.1E-8 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 SMART SM00028 407 440 1.7E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 Pfam PF13519 von Willebrand factor type A domain 96 203 1.7E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 SUPERFAMILY SSF48452 382 458 6.83E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 Gene3D G3DSA:1.25.40.10 382 458 3.9E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0874 52f38c3c09c9fa261416e4f8a3a76697 661 Gene3D G3DSA:3.40.50.410 92 285 1.2E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4254 cdf8863d831d75a13309e3c844be3ac3 322 Pfam PF01522 Polysaccharide deacetylase 49 157 5.0E-20 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Thivi_4254 cdf8863d831d75a13309e3c844be3ac3 322 SUPERFAMILY SSF88713 18 267 3.95E-41 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_4254 cdf8863d831d75a13309e3c844be3ac3 322 Pfam PF11959 Domain of unknown function (DUF3473) 159 288 5.0E-53 T 13-10-2018 IPR022560 Domain of unknown function DUF3473 Thivi_4254 cdf8863d831d75a13309e3c844be3ac3 322 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 17 288 2.8E-133 T 13-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase Thivi_4254 cdf8863d831d75a13309e3c844be3ac3 322 Gene3D G3DSA:3.20.20.370 15 271 2.6E-44 T 13-10-2018 Thivi_3107 1de61b114342335d6b96ab230193f2e1 86 Gene3D G3DSA:2.10.260.10 1 42 2.4E-12 T 13-10-2018 Thivi_3107 1de61b114342335d6b96ab230193f2e1 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 4 46 1.3E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_3107 1de61b114342335d6b96ab230193f2e1 86 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 42 3.4E-15 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_3107 1de61b114342335d6b96ab230193f2e1 86 SMART SM00966 4 49 3.4E-11 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_3107 1de61b114342335d6b96ab230193f2e1 86 SUPERFAMILY SSF89447 1 42 2.96E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_0613 3691f3097e0ff9964c473de97c8f6034 404 SUPERFAMILY SSF53649 53 401 4.64E-41 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Thivi_0613 3691f3097e0ff9964c473de97c8f6034 404 Gene3D G3DSA:3.40.720.10 46 403 5.1E-32 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Thivi_0613 3691f3097e0ff9964c473de97c8f6034 404 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 56 289 1.5E-17 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Thivi_4014 38a3de1f4eeee1954ca276e6666b2dbd 229 SUPERFAMILY SSF53474 1 229 2.34E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4014 38a3de1f4eeee1954ca276e6666b2dbd 229 Gene3D G3DSA:3.40.50.1820 1 229 9.6E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4014 38a3de1f4eeee1954ca276e6666b2dbd 229 Pfam PF12697 Alpha/beta hydrolase family 1 227 6.9E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 Gene3D G3DSA:3.40.50.1370 9 138 7.0E-116 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 2.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 52 66 2.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 2.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 85 98 2.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 2.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 2.9E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.9E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 2.9E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.9E-26 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 Gene3D G3DSA:3.40.50.1370 139 300 7.0E-116 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 9 149 6.5E-49 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 302 5.3E-49 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 SUPERFAMILY SSF53671 6 304 5.66E-103 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 9 304 3.5E-116 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Thivi_1870 7960755b83ebdbb609f042a2481e3807 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 8 305 80.336 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Thivi_2283 e7600658095678976d0e647491158c0f 917 SUPERFAMILY SSF52540 599 896 3.28E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2283 e7600658095678976d0e647491158c0f 917 Gene3D G3DSA:1.10.8.60 822 916 1.2E-10 T 13-10-2018 Thivi_2283 e7600658095678976d0e647491158c0f 917 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 369 1.6E-9 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 SMART SM00382 650 793 1.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2283 e7600658095678976d0e647491158c0f 917 SMART SM00382 231 372 3.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2283 e7600658095678976d0e647491158c0f 917 Gene3D G3DSA:3.40.50.300 603 820 7.0E-65 T 13-10-2018 Thivi_2283 e7600658095678976d0e647491158c0f 917 SMART SM01086 822 914 1.4E-12 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_2283 e7600658095678976d0e647491158c0f 917 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 SUPERFAMILY SSF81923 15 128 4.51E-16 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_2283 e7600658095678976d0e647491158c0f 917 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 822 894 2.4E-12 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_2283 e7600658095678976d0e647491158c0f 917 SUPERFAMILY SSF52540 192 522 4.98E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2283 e7600658095678976d0e647491158c0f 917 Gene3D G3DSA:3.40.50.300 186 375 1.3E-62 T 13-10-2018 Thivi_2283 e7600658095678976d0e647491158c0f 917 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 672 2.1E-30 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 717 2.1E-30 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 728 746 2.1E-30 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 761 775 2.1E-30 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 Gene3D G3DSA:3.40.50.300 377 597 5.6E-42 T 13-10-2018 Thivi_2283 e7600658095678976d0e647491158c0f 917 Gene3D G3DSA:1.10.1780.10 1 161 3.1E-39 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Thivi_2283 e7600658095678976d0e647491158c0f 917 Pfam PF07724 AAA domain (Cdc48 subfamily) 649 815 7.9E-38 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_2283 e7600658095678976d0e647491158c0f 917 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 14 907 0.0 T 13-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 Thivi_2584 c2cfea9b26f922b887b261b68d313433 340 Pfam PF01061 ABC-2 type transporter 145 306 2.4E-27 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Gene3D G3DSA:3.30.479.20 158 274 3.4E-43 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Hamap MF_00050 Elongation factor Ts [tsf]. 1 292 76.903 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 1.2E-100 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 SUPERFAMILY SSF54713 154 293 8.24E-52 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 SUPERFAMILY SSF46934 1 55 1.11E-18 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Gene3D G3DSA:3.30.479.20 56 152 8.4E-25 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Gene3D G3DSA:1.10.286.20 194 240 3.4E-43 T 13-10-2018 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Gene3D G3DSA:1.10.8.10 1 55 1.1E-24 T 13-10-2018 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 Pfam PF00889 Elongation factor TS 72 275 3.4E-66 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Thivi_2746 dcd1668717eba2e1d02830f242e77d05 295 SUPERFAMILY SSF54713 56 149 2.88E-21 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 Gene3D G3DSA:3.40.50.2300 7 155 9.5E-38 T 13-10-2018 Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 Gene3D G3DSA:1.10.3210.10 156 358 1.5E-72 T 13-10-2018 Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 SMART SM00448 22 135 3.2E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 SUPERFAMILY SSF109604 159 346 2.7E-41 T 13-10-2018 Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 Pfam PF01966 HD domain 184 305 1.0E-15 T 13-10-2018 IPR006674 HD domain Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 SMART SM00471 177 315 3.7E-6 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 SUPERFAMILY SSF52172 18 145 1.15E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1202 998fef6f1c75e96018fcfb64c742e0d9 361 Pfam PF00072 Response regulator receiver domain 24 135 7.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Pfam PF03924 CHASE domain 90 205 7.5E-18 T 13-10-2018 IPR006189 CHASE domain Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Pfam PF08448 PAS fold 284 395 1.1E-19 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 8.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 8.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 625 8.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 644 8.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SMART SM00388 424 492 1.8E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SUPERFAMILY SSF55874 481 645 4.58E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SMART SM00091 278 344 1.5E-7 T 13-10-2018 IPR000014 PAS domain Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Gene3D G3DSA:3.30.565.10 494 645 1.1E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SMART SM01079 29 208 2.7E-43 T 13-10-2018 IPR006189 CHASE domain Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 536 644 8.9E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SMART SM00387 535 645 5.8E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2340 2a092476148657d67a0bda3e90c83056 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 275 399 5.5E-19 T 13-10-2018 IPR000014 PAS domain Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Gene3D G3DSA:3.30.450.20 265 406 4.0E-33 T 13-10-2018 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SUPERFAMILY SSF55785 270 391 5.76E-25 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Pfam PF00512 His Kinase A (phospho-acceptor) domain 425 491 6.5E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 SUPERFAMILY SSF47384 410 491 1.96E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2340 2a092476148657d67a0bda3e90c83056 645 Gene3D G3DSA:1.10.287.130 411 493 1.8E-16 T 13-10-2018 Thivi_2736 9f4859b256899851183f3ccc653cfdc2 157 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 17 155 8.5E-58 T 13-10-2018 IPR004952 Uncharacterised protein family UPF0460 Thivi_2736 9f4859b256899851183f3ccc653cfdc2 157 Pfam PF03270 Protein of unknown function, DUF269 36 155 7.4E-50 T 13-10-2018 IPR004952 Uncharacterised protein family UPF0460 Thivi_2736 9f4859b256899851183f3ccc653cfdc2 157 Gene3D G3DSA:1.10.3100.20 5 156 3.1E-55 T 13-10-2018 Thivi_2736 9f4859b256899851183f3ccc653cfdc2 157 PIRSF PIRSF005788 1 157 8.5E-64 T 13-10-2018 IPR004952 Uncharacterised protein family UPF0460 Thivi_1132 93007476ab53b5fca0960b02049e02f5 154 Gene3D G3DSA:3.40.50.1450 1 152 7.1E-27 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_1132 93007476ab53b5fca0960b02049e02f5 154 SUPERFAMILY SSF53163 2 145 1.44E-26 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_1132 93007476ab53b5fca0960b02049e02f5 154 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 143 3.8E-21 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4062 db22e4a00f5c6e41108a8bb333b81a84 339 Pfam PF00535 Glycosyl transferase family 2 35 168 1.3E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4062 db22e4a00f5c6e41108a8bb333b81a84 339 SUPERFAMILY SSF53448 32 260 7.16E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4062 db22e4a00f5c6e41108a8bb333b81a84 339 Gene3D G3DSA:3.90.550.10 11 273 5.7E-64 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0627 16c944edfa4e31084124b5179071df14 431 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.3E-37 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Gene3D G3DSA:3.10.50.40 158 235 9.4E-28 T 13-10-2018 Thivi_0627 16c944edfa4e31084124b5179071df14 431 TIGRFAM TIGR00115 tig: trigger factor 11 408 7.5E-125 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 237 7.6E-14 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_0627 16c944edfa4e31084124b5179071df14 431 SUPERFAMILY SSF54534 88 241 1.65E-32 T 13-10-2018 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Gene3D G3DSA:3.30.70.1050 1 114 3.2E-36 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 SUPERFAMILY SSF109998 248 426 1.77E-41 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_0627 16c944edfa4e31084124b5179071df14 431 Gene3D G3DSA:1.10.3120.10 115 155 1.4E-5 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Gene3D G3DSA:1.10.3120.10 236 428 4.8E-54 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 409 3.1E-28 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 Hamap MF_00303 Trigger factor [tig]. 1 415 20.11 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 SUPERFAMILY SSF102735 1 128 9.02E-35 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Thivi_0627 16c944edfa4e31084124b5179071df14 431 PIRSF PIRSF003095 1 430 5.9E-113 T 13-10-2018 IPR005215 Trigger factor GO:0015031 Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 32 52 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 Gene3D G3DSA:3.30.700.10 34 179 3.5E-11 T 13-10-2018 Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 32 53 2.7E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 32 54 1.8E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 Pfam PF12019 Type II transport protein GspH 69 178 1.6E-9 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Thivi_2202 f5bbb3e7afdbb504d1cb7d202472b824 197 SUPERFAMILY SSF54523 34 115 1.18E-12 T 13-10-2018 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 TIGRFAM TIGR01150 puhA: photosynthetic reaction center H subunit 3 255 4.8E-87 T 13-10-2018 IPR005652 Photosynthetic reaction centre, H subunit GO:0019684|GO:0030077|GO:0045156 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 SUPERFAMILY SSF81490 8 42 9.61E-15 T 13-10-2018 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 Gene3D G3DSA:3.90.50.10 120 259 3.1E-56 T 13-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 Pfam PF05239 PRC-barrel domain 148 207 2.6E-10 T 13-10-2018 IPR027275 PRC-barrel domain Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 Gene3D G3DSA:4.10.540.10 1 119 9.5E-46 T 13-10-2018 IPR037097 Photosynthetic reaction centre, H subunit, N-terminal domain superfamily GO:0019684|GO:0030077|GO:0045156 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 Pfam PF03967 Photosynthetic reaction centre, H-chain N-terminal region 4 139 4.2E-54 T 13-10-2018 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal GO:0019684|GO:0030077|GO:0045156 Thivi_2405 46b91f31687910d30a5bc6808e6b7059 260 SUPERFAMILY SSF50346 35 257 6.91E-74 T 13-10-2018 IPR011033 PRC-barrel-like superfamily Thivi_4342 83bab5b68597764af8b7fdc6d66cb824 928 Gene3D G3DSA:3.40.50.300 86 285 3.5E-11 T 13-10-2018 Thivi_4342 83bab5b68597764af8b7fdc6d66cb824 928 SUPERFAMILY SSF52540 10 284 1.38E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4342 83bab5b68597764af8b7fdc6d66cb824 928 Gene3D G3DSA:3.40.50.300 471 605 1.5E-5 T 13-10-2018 Thivi_4342 83bab5b68597764af8b7fdc6d66cb824 928 Pfam PF04851 Type III restriction enzyme, res subunit 10 270 1.2E-13 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 Pfam PF13537 Glutamine amidotransferase domain 62 156 1.4E-11 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 SUPERFAMILY SSF56235 50 204 2.32E-16 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 SUPERFAMILY SSF52402 229 598 6.05E-47 T 13-10-2018 Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 Pfam PF00733 Asparagine synthase 238 593 8.1E-51 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 Gene3D G3DSA:3.60.20.10 48 206 3.3E-15 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 PIRSF PIRSF001589 58 603 1.8E-62 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 Gene3D G3DSA:3.40.50.620 226 417 1.2E-33 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_4063 58500a5d75c4d929705c525efd3e9476 603 Gene3D G3DSA:3.40.50.620 434 570 4.1E-7 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1055 060e26bfe3e4c868125eb55ac5bbce3f 303 Pfam PF00146 NADH dehydrogenase 10 297 4.5E-54 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 SUPERFAMILY SSF56801 3 622 1.06E-159 T 13-10-2018 Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 588 2.9E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 1.2E-23 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 Pfam PF00501 AMP-binding enzyme 64 500 2.5E-84 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 Gene3D G3DSA:3.30.300.30 496 625 5.1E-22 T 13-10-2018 Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_3075 189e6a1adccdcb2076664b7a89f18354 631 Gene3D G3DSA:3.40.50.12780 35 493 7.1E-107 T 13-10-2018 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 185 487 5.9E-125 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 SUPERFAMILY SSF53187 179 493 6.91E-123 T 13-10-2018 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 Gene3D G3DSA:3.40.220.10 1 160 3.8E-43 T 13-10-2018 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.1E-22 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 SUPERFAMILY SSF52949 1 184 2.88E-40 T 13-10-2018 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 Gene3D G3DSA:3.40.630.10 181 496 6.6E-136 T 13-10-2018 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 37.669 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 3.7E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 3.7E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 3.7E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 3.7E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Thivi_1805 acfacdb4fde5dc05459b001a94543aea 500 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 3.7E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Thivi_1945 f5468ab0e4018071ebd8f4dc7b7ba8da 351 SUPERFAMILY SSF53098 30 309 6.14E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 SMART SM00885 516 647 4.1E-6 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 Pfam PF13362 Toprim domain 321 418 2.1E-6 T 13-10-2018 IPR006171 TOPRIM domain Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 SUPERFAMILY SSF52540 657 795 2.96E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 Gene3D G3DSA:3.40.50.300 631 818 1.1E-16 T 13-10-2018 Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 Pfam PF08706 D5 N terminal like 595 643 2.5E-7 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal Thivi_2368 1072ec1b6fe18ac9447c40e5471e78f6 993 Pfam PF08707 Primase C terminal 2 (PriCT-2) 93 164 1.5E-20 T 13-10-2018 IPR014819 Primase, C-terminal 2 GO:0016817 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Gene3D G3DSA:3.40.50.300 51 316 4.6E-95 T 13-10-2018 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 SUPERFAMILY SSF52540 57 392 5.61E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Gene3D G3DSA:3.30.50.30 1 43 6.6E-10 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 407 1.2E-147 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 394 3.4E-13 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Gene3D G3DSA:1.10.8.60 317 423 5.5E-35 T 13-10-2018 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Pfam PF06689 ClpX C4-type zinc finger 7 41 5.0E-12 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 SUPERFAMILY SSF57716 6 41 1.11E-6 T 13-10-2018 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 SMART SM00382 112 315 7.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 3.0E-41 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 SMART SM01086 318 410 4.4E-29 T 13-10-2018 IPR019489 Clp ATPase, C-terminal Thivi_4295 2006c245c90c0346abdc8f077fc231cc 428 SMART SM00994 5 44 1.4E-12 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Thivi_2315 4347ed5250877cf04739e13e669ea414 263 Gene3D G3DSA:3.40.50.11690 118 246 1.3E-31 T 13-10-2018 Thivi_2315 4347ed5250877cf04739e13e669ea414 263 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 18 240 20.861 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Thivi_2315 4347ed5250877cf04739e13e669ea414 263 Gene3D G3DSA:3.10.20.310 47 117 7.7E-17 T 13-10-2018 Thivi_2315 4347ed5250877cf04739e13e669ea414 263 Pfam PF08478 POTRA domain, FtsQ-type 49 117 4.2E-11 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type Thivi_2315 4347ed5250877cf04739e13e669ea414 263 Pfam PF03799 Cell division protein FtsQ 121 232 8.2E-18 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 SMART SM00729 140 365 1.3E-52 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Gene3D G3DSA:3.40.50.12160 10 135 3.7E-26 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Gene3D G3DSA:3.80.30.20 138 379 1.7E-70 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Gene3D G3DSA:2.40.50.140 380 444 5.9E-18 T 13-10-2018 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 SUPERFAMILY SSF102114 127 370 1.05E-49 T 13-10-2018 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 440 60.75 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 438 1.2E-101 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 437 3.9E-170 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Pfam PF04055 Radical SAM superfamily 146 323 5.7E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_4527 56f30723dfc800038009544e9c2d6d9d 445 Pfam PF00919 Uncharacterized protein family UPF0004 11 94 1.2E-18 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 SMART SM00729 195 408 2.9E-27 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 Pfam PF02310 B12 binding domain 13 129 2.0E-20 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 Gene3D G3DSA:3.80.30.20 196 398 2.2E-21 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 TIGRFAM TIGR02026 BchE: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2 492 1.3E-229 T 13-10-2018 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 Pfam PF04055 Radical SAM superfamily 201 362 1.1E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 SUPERFAMILY SSF102114 201 391 3.53E-36 T 13-10-2018 Thivi_1709 d043c8a8e1f1f98b19a54863d0e5cc11 577 Gene3D G3DSA:3.40.50.280 38 141 8.9E-8 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Gene3D G3DSA:2.40.50.140 106 187 9.4E-7 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SUPERFAMILY SSF50249 199 290 1.99E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 116 132 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 47 61 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 134 151 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 344 362 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 29 47 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 304 323 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.1E-48 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Gene3D G3DSA:2.40.50.140 196 280 9.1E-26 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Gene3D G3DSA:2.40.50.140 281 364 7.0E-27 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SMART SM00316 111 180 9.2E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SMART SM00316 289 361 1.7E-23 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SMART SM00316 199 274 1.5E-22 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SMART SM00316 27 95 0.12 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Gene3D G3DSA:2.40.50.140 13 105 4.2E-11 T 13-10-2018 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SUPERFAMILY SSF50249 20 120 1.42E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SUPERFAMILY SSF50249 269 367 8.92E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 SUPERFAMILY SSF50249 111 193 3.21E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Pfam PF00575 S1 RNA binding domain 199 259 1.9E-18 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Pfam PF00575 S1 RNA binding domain 116 172 2.0E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_2846 47098c92c43fb4c4e857d6e07688ce64 404 Pfam PF00575 S1 RNA binding domain 289 360 9.1E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 Gene3D G3DSA:3.40.50.150 3 215 6.6E-58 T 13-10-2018 Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 34 212 6.0E-47 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 Pfam PF02527 rRNA small subunit methyltransferase G 30 203 3.6E-47 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 PIRSF PIRSF003078 9 215 6.0E-49 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 SUPERFAMILY SSF53335 12 213 1.82E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2602 b4d60aaaa317ddb8786888965090f0db 215 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 23 211 26.522 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 SMART SM00671 76 111 3.6E-10 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 SMART SM00671 40 75 2.2E-4 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 SMART SM00671 112 147 0.041 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 SUPERFAMILY SSF81901 15 142 3.27E-30 T 13-10-2018 Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 Pfam PF08238 Sel1 repeat 118 142 6.3E-4 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 Pfam PF08238 Sel1 repeat 41 74 6.8E-6 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 Pfam PF08238 Sel1 repeat 78 110 4.1E-10 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2631 b95498c91efa8eba47eab48d12040e59 147 Gene3D G3DSA:1.25.40.10 12 146 5.6E-35 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 Pfam PF13692 Glycosyl transferases group 1 511 650 4.6E-26 T 13-10-2018 Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 Gene3D G3DSA:3.90.550.10 46 276 3.9E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 Gene3D G3DSA:3.40.50.2000 506 667 3.8E-20 T 13-10-2018 Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 Pfam PF13641 Glycosyltransferase like family 2 55 264 3.3E-16 T 13-10-2018 Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 SUPERFAMILY SSF53448 55 295 2.42E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2684 ea4f4d8b0625fd393614abb96f8b93ae 686 SUPERFAMILY SSF53756 337 682 1.0E-27 T 13-10-2018 Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 Gene3D G3DSA:3.10.50.40 261 393 1.7E-35 T 13-10-2018 Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 Pfam PF00639 PPIC-type PPIASE domain 272 366 6.5E-25 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 Pfam PF13624 SurA N-terminal domain 1 162 3.9E-46 T 13-10-2018 Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 SUPERFAMILY SSF54534 262 369 9.81E-30 T 13-10-2018 Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 SUPERFAMILY SSF109998 40 293 7.98E-29 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily Thivi_0634 8269d7450ddc0eb8c4995e7454879c5e 640 Gene3D G3DSA:1.10.4030.30 39 200 1.4E-15 T 13-10-2018 Thivi_1968 d9604ec3f4cc0bb334fa4ade05763f64 175 Pfam PF13975 gag-polyprotein putative aspartyl protease 42 135 1.1E-9 T 13-10-2018 Thivi_1968 d9604ec3f4cc0bb334fa4ade05763f64 175 Gene3D G3DSA:2.40.70.10 22 158 2.3E-14 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_1968 d9604ec3f4cc0bb334fa4ade05763f64 175 SUPERFAMILY SSF50630 39 137 8.44E-5 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 589 4.7E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 204 4.5E-14 T 13-10-2018 IPR000014 PAS domain Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 207 330 2.1E-17 T 13-10-2018 IPR000014 PAS domain Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00086 155 197 3.1E-4 T 13-10-2018 IPR001610 PAC motif Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00086 282 323 0.23 T 13-10-2018 IPR001610 PAC motif Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Gene3D G3DSA:3.30.450.20 205 327 5.1E-22 T 13-10-2018 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Pfam PF00072 Response regulator receiver domain 620 730 3.5E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00091 81 148 26.0 T 13-10-2018 IPR000014 PAS domain Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00091 209 276 4.3E-5 T 13-10-2018 IPR000014 PAS domain Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00388 361 426 5.9E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Pfam PF08448 PAS fold 89 198 5.1E-16 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Pfam PF08448 PAS fold 215 325 7.2E-18 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SUPERFAMILY SSF55785 194 321 5.23E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Gene3D G3DSA:1.10.287.130 328 424 2.2E-27 T 13-10-2018 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SUPERFAMILY SSF55785 69 195 9.95E-22 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Gene3D G3DSA:3.30.565.10 427 593 6.5E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Gene3D G3DSA:3.40.50.12740 617 739 1.5E-37 T 13-10-2018 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SUPERFAMILY SSF52172 615 736 2.13E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SUPERFAMILY SSF55874 415 588 6.81E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Gene3D G3DSA:3.30.450.20 67 204 3.7E-29 T 13-10-2018 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00387 474 590 1.4E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SUPERFAMILY SSF47384 346 427 1.96E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 4.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 529 4.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 587 4.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 568 4.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 425 5.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0064 a4dc1fd091484311af76a306d5b3f9bf 740 SMART SM00448 618 731 3.2E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 4.2E-70 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 1.4E-16 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 SUPERFAMILY SSF50022 31 189 3.72E-41 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 Gene3D G3DSA:1.20.5.510 1 40 2.7E-7 T 13-10-2018 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 Gene3D G3DSA:2.102.10.10 43 191 5.9E-45 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_0859 c9ff2513cc7d3f1136e908b4723a8d72 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 176 2.5E-10 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 332 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 8.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 Pfam PF00672 HAMP domain 79 129 1.9E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SMART SM00388 134 198 4.6E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SMART SM00304 79 133 1.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SUPERFAMILY SSF55874 187 352 3.01E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 Gene3D G3DSA:3.30.565.10 197 357 3.2E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 352 1.3E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SUPERFAMILY SSF158472 79 130 5.62E-7 T 13-10-2018 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 Gene3D G3DSA:1.10.287.130 77 193 1.1E-19 T 13-10-2018 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SMART SM00387 243 354 3.9E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 SUPERFAMILY SSF47384 117 199 9.02E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0781 225341f268ae8ad49e1a9401113b2605 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 198 1.1E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2094 bc28c5944b354fdcf756264f1df0c207 463 Pfam PF04991 LicD family 95 140 7.7E-5 T 13-10-2018 IPR007074 LicD family Thivi_2094 bc28c5944b354fdcf756264f1df0c207 463 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 311 374 2.3E-11 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_2094 bc28c5944b354fdcf756264f1df0c207 463 Gene3D G3DSA:3.40.50.620 309 446 1.0E-23 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2094 bc28c5944b354fdcf756264f1df0c207 463 SUPERFAMILY SSF52374 308 448 2.37E-18 T 13-10-2018 Thivi_2094 bc28c5944b354fdcf756264f1df0c207 463 Pfam PF01467 Cytidylyltransferase-like 313 442 4.9E-12 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 432 5.4E-133 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 Hamap MF_01465 Protein translocase subunit SecY [secY]. 12 436 29.751 T 13-10-2018 IPR026593 Protein translocase subunit SecY Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 SUPERFAMILY SSF103491 4 427 6.02E-133 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 Gene3D G3DSA:1.10.3370.10 10 432 5.7E-164 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 Pfam PF00344 SecY translocase 78 420 2.9E-118 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 118 141 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 373 391 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 405 423 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 318 340 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 25 43 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 77 97 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PRINTS PR00303 Preprotein translocase SecY subunit signature 275 294 3.8E-93 T 13-10-2018 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 ProSitePatterns PS00755 Protein secY signature 1. 78 97 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4221 a396b81b186ea1c31330cc9ce418b314 450 PIRSF PIRSF004557 1 443 4.0E-125 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4131 1be0983fbb1b85570dc5e2d05843937b 154 Gene3D G3DSA:2.30.30.40 64 151 3.9E-10 T 13-10-2018 Thivi_4111 a5ba6d80df7c17e3a31cebf5871745cb 399 SMART SM00283 100 346 3.3E-5 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4111 a5ba6d80df7c17e3a31cebf5871745cb 399 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 175 301 2.6E-22 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4111 a5ba6d80df7c17e3a31cebf5871745cb 399 SUPERFAMILY SSF58104 107 351 2.22E-33 T 13-10-2018 Thivi_4111 a5ba6d80df7c17e3a31cebf5871745cb 399 Gene3D G3DSA:1.10.287.950 97 369 1.2E-34 T 13-10-2018 Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 SUPERFAMILY SSF56235 1 222 1.8E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 PIRSF PIRSF001589 1 604 1.7E-182 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 522 3.0E-126 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 Gene3D G3DSA:3.60.20.10 4 189 6.4E-59 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 Pfam PF00733 Asparagine synthase 240 585 1.4E-82 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.4E-41 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_1740 05c9f4810071b36bb707bacd3b7a54e4 606 SUPERFAMILY SSF52402 231 561 3.94E-70 T 13-10-2018 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 SUPERFAMILY SSF52738 171 354 5.23E-59 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_0381 be10983e4e0791881c7391efb08053ed 357 SUPERFAMILY SSF52172 3 110 2.13E-26 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0381 be10983e4e0791881c7391efb08053ed 357 SMART SM00448 3 126 2.8E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 PIRSF PIRSF000876 1 356 1.4E-125 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 Gene3D G3DSA:3.40.50.180 164 356 4.9E-63 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_0381 be10983e4e0791881c7391efb08053ed 357 Pfam PF01339 CheB methylesterase 174 351 6.2E-56 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 Pfam PF00072 Response regulator receiver domain 5 109 1.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 Gene3D G3DSA:3.40.50.2300 2 136 7.9E-30 T 13-10-2018 Thivi_0381 be10983e4e0791881c7391efb08053ed 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 357 37.355 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 Gene3D G3DSA:3.30.420.40 1 198 3.4E-68 T 13-10-2018 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 SUPERFAMILY SSF53067 1 199 2.46E-63 T 13-10-2018 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 Gene3D G3DSA:3.30.420.40 199 401 4.9E-81 T 13-10-2018 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 Hamap MF_00020 Acetate kinase [ackA]. 1 401 179.102 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 176 189 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 324 340 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 3 14 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 380 392 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 206 227 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PRINTS PR00471 Acetate kinase family signature 302 315 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 SUPERFAMILY SSF53067 160 400 2.19E-86 T 13-10-2018 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 TIGRFAM TIGR00016 ackA: acetate kinase 1 396 2.2E-144 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 Pfam PF00871 Acetokinase family 2 393 1.0E-143 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0491 788a80ac77a46bab26c29c3c08e130bd 401 PIRSF PIRSF000722 1 400 2.6E-143 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Gene3D G3DSA:3.30.300.30 518 648 1.5E-27 T 13-10-2018 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.837 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 5.1E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Gene3D G3DSA:3.40.50.12780 55 515 1.2E-108 T 13-10-2018 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 82 3.1E-24 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 SUPERFAMILY SSF56801 13 642 5.89E-187 T 13-10-2018 Thivi_0244 55e72819a8811fe46d700dbc7bdf062c 648 Pfam PF00501 AMP-binding enzyme 84 522 5.0E-97 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 Gene3D G3DSA:3.40.190.10 134 361 4.9E-124 T 13-10-2018 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 Pfam PF13416 Bacterial extracellular solute-binding protein 46 319 1.0E-26 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Thivi_3176 522ccdafefea373acaaf67ee95251150 367 Gene3D G3DSA:3.40.190.10 30 335 4.9E-124 T 13-10-2018 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PIRSF PIRSF019574 4 367 8.9E-121 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 4.9E-56 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Thivi_3176 522ccdafefea373acaaf67ee95251150 367 SUPERFAMILY SSF53850 26 365 1.42E-91 T 13-10-2018 Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 SUPERFAMILY SSF53659 166 455 1.03E-66 T 13-10-2018 Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 Pfam PF01515 Phosphate acetyl/butaryl transferase 240 451 4.7E-45 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 Gene3D G3DSA:3.40.718.10 160 456 1.0E-96 T 13-10-2018 Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 Pfam PF01575 MaoC like domain 22 115 2.9E-18 T 13-10-2018 IPR002539 MaoC-like dehydratase domain Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 SUPERFAMILY SSF54637 7 142 6.54E-36 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_0976 bab485a09b4763cef576768e6bb96ed1 467 Gene3D G3DSA:3.10.129.10 4 157 3.8E-42 T 13-10-2018 Thivi_1701 c00a43ae73b07179f015c150b35a4606 343 Gene3D G3DSA:1.10.3470.10 14 342 3.5E-94 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Thivi_1701 c00a43ae73b07179f015c150b35a4606 343 SUPERFAMILY SSF81345 13 337 4.71E-76 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Thivi_1701 c00a43ae73b07179f015c150b35a4606 343 Pfam PF01032 FecCD transport family 27 337 1.1E-88 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Thivi_1157 6ac61b6547235deba0a013c33fb8e677 291 Gene3D G3DSA:3.90.1070.10 107 184 6.5E-56 T 13-10-2018 Thivi_1157 6ac61b6547235deba0a013c33fb8e677 291 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 8 278 8.0E-44 T 13-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Thivi_1157 6ac61b6547235deba0a013c33fb8e677 291 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 223 1.2E-15 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Thivi_1157 6ac61b6547235deba0a013c33fb8e677 291 SUPERFAMILY SSF56784 10 241 4.34E-22 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1157 6ac61b6547235deba0a013c33fb8e677 291 Gene3D G3DSA:3.40.50.1000 10 276 6.5E-56 T 13-10-2018 IPR023214 HAD superfamily Thivi_1853 12fab2edc92c483d881844bed97c738f 454 SMART SM00729 147 377 2.2E-62 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 447 1.2E-142 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Gene3D G3DSA:3.80.30.20 145 387 1.4E-81 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Pfam PF04055 Radical SAM superfamily 151 335 1.6E-26 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 SUPERFAMILY SSF102114 122 381 1.7E-63 T 13-10-2018 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 450 73.312 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Gene3D G3DSA:3.40.50.12160 3 136 4.0E-31 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Pfam PF01938 TRAM domain 388 449 4.3E-18 T 13-10-2018 IPR002792 TRAM domain Thivi_1853 12fab2edc92c483d881844bed97c738f 454 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 449 1.8E-181 T 13-10-2018 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.3E-27 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Thivi_1853 12fab2edc92c483d881844bed97c738f 454 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Thivi_4044 9fa9002ad9d9610a16efffd22174c30a 266 Gene3D G3DSA:3.20.20.370 17 244 1.7E-54 T 13-10-2018 Thivi_4044 9fa9002ad9d9610a16efffd22174c30a 266 SUPERFAMILY SSF88713 36 219 4.2E-37 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_4044 9fa9002ad9d9610a16efffd22174c30a 266 Pfam PF01522 Polysaccharide deacetylase 74 205 8.0E-28 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Thivi_0029 ec01a7c3230f852e1a2bc3e660e2de29 209 Gene3D G3DSA:3.40.50.10610 20 203 3.6E-7 T 13-10-2018 Thivi_0029 ec01a7c3230f852e1a2bc3e660e2de29 209 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 192 7.0E-32 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Thivi_0029 ec01a7c3230f852e1a2bc3e660e2de29 209 SUPERFAMILY SSF159594 28 198 1.26E-25 T 13-10-2018 Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 Pfam PF00027 Cyclic nucleotide-binding domain 31 118 4.4E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 SUPERFAMILY SSF51206 6 145 1.23E-29 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 Pfam PF13545 Crp-like helix-turn-helix domain 152 217 8.8E-12 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 Gene3D G3DSA:1.10.10.10 146 217 3.5E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 SUPERFAMILY SSF46785 146 216 3.57E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 SMART SM00100 12 131 3.5E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 SMART SM00419 164 212 9.0E-8 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_4145 82aab95ed1afbc55a937d9450be8ad73 241 Gene3D G3DSA:2.60.120.10 4 145 7.1E-41 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0330 0eef0a4818e24652171ac1ba3cbefb02 422 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 307 1.3E-24 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0330 0eef0a4818e24652171ac1ba3cbefb02 422 Gene3D G3DSA:1.10.287.950 80 368 3.8E-35 T 13-10-2018 Thivi_0330 0eef0a4818e24652171ac1ba3cbefb02 422 SMART SM00283 130 348 9.3E-8 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0330 0eef0a4818e24652171ac1ba3cbefb02 422 SUPERFAMILY SSF58104 85 367 3.66E-37 T 13-10-2018 Thivi_3394 474ddf756ce846bf900ae1f8294f824e 186 Pfam PF02508 Rnf-Nqr subunit, membrane protein 3 185 6.5E-61 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3394 474ddf756ce846bf900ae1f8294f824e 186 PIRSF PIRSF006102 1 186 3.7E-61 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3394 474ddf756ce846bf900ae1f8294f824e 186 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 1 186 24.73 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_3394 474ddf756ce846bf900ae1f8294f824e 186 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 185 1.3E-83 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_2717 794e2e531d05109e2f6640ba612f95c4 152 Pfam PF00692 dUTPase 17 150 1.6E-35 T 13-10-2018 IPR029054 dUTPase-like Thivi_2717 794e2e531d05109e2f6640ba612f95c4 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 32.188 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Thivi_2717 794e2e531d05109e2f6640ba612f95c4 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 150 2.0E-44 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Thivi_2717 794e2e531d05109e2f6640ba612f95c4 152 SUPERFAMILY SSF51283 3 151 1.7E-50 T 13-10-2018 IPR036157 dUTPase-like superfamily Thivi_2717 794e2e531d05109e2f6640ba612f95c4 152 Gene3D G3DSA:2.70.40.10 1 151 5.7E-49 T 13-10-2018 IPR036157 dUTPase-like superfamily Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 210 28.416 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 Pfam PF13500 AAA domain 3 210 3.5E-39 T 13-10-2018 Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 Gene3D G3DSA:3.40.50.300 2 222 1.1E-67 T 13-10-2018 Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 175 9.6E-45 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 SUPERFAMILY SSF52540 1 210 5.69E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1766 d55bf145bbd42b94266697c018521b5f 226 PIRSF PIRSF006755 1 224 6.1E-69 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Thivi_1574 e43a31adce179c705faba73d1c09d350 792 Pfam PF00092 von Willebrand factor type A domain 595 768 1.4E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1574 e43a31adce179c705faba73d1c09d350 792 Gene3D G3DSA:3.40.50.410 591 779 1.2E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1574 e43a31adce179c705faba73d1c09d350 792 SMART SM00327 592 791 1.2E-10 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1574 e43a31adce179c705faba73d1c09d350 792 SUPERFAMILY SSF53300 593 786 1.02E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Gene3D G3DSA:3.40.140.20 253 408 4.6E-57 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 SMART SM00851 61 174 4.1E-56 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 PIRSF PIRSF000414 43 564 1.9E-222 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 49 564 45.0 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Pfam PF01808 AICARFT/IMPCHase bienzyme 179 494 1.8E-115 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Gene3D G3DSA:3.40.140.20 428 564 9.7E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Gene3D G3DSA:3.40.50.1380 41 243 3.2E-85 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 51 564 4.8E-234 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 SUPERFAMILY SSF53927 256 564 9.03E-127 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 SMART SM00798 179 496 2.1E-197 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 Pfam PF02142 MGS-like domain 61 174 2.0E-27 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain Thivi_1112 c4ca6b8704ab1bd6848d3efad1fba275 564 SUPERFAMILY SSF52335 49 238 1.83E-67 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Thivi_0918 04e899b7ad91a77660e8a4a59e40533f 230 SUPERFAMILY SSF51366 24 223 9.26E-60 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_0918 04e899b7ad91a77660e8a4a59e40533f 230 Gene3D G3DSA:3.20.20.70 22 227 1.4E-65 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0918 04e899b7ad91a77660e8a4a59e40533f 230 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 26 221 1.3E-48 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Thivi_0918 04e899b7ad91a77660e8a4a59e40533f 230 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 24 226 42.011 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 SMART SM00642 99 556 6.2E-24 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 Pfam PF00128 Alpha amylase, catalytic domain 107 396 1.9E-40 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 SUPERFAMILY SSF51011 571 648 3.6E-5 T 13-10-2018 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 Gene3D G3DSA:3.20.20.80 97 560 5.3E-195 T 13-10-2018 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 Gene3D G3DSA:3.90.400.10 184 259 5.3E-195 T 13-10-2018 Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 SUPERFAMILY SSF51445 21 563 1.3E-116 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 Gene3D G3DSA:2.60.40.1180 567 655 3.9E-5 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta Thivi_1155 fff88291ad9c99619fb4cf9d7fb492c2 657 Gene3D G3DSA:1.10.1740.10 6 94 3.7E-18 T 13-10-2018 Thivi_0005 82b1454ae8ce9e006d4087e325200b13 228 SUPERFAMILY SSF56214 123 212 1.53E-12 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Thivi_0005 82b1454ae8ce9e006d4087e325200b13 228 Gene3D G3DSA:3.90.470.20 24 144 7.9E-22 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Thivi_0005 82b1454ae8ce9e006d4087e325200b13 228 SUPERFAMILY SSF56214 30 115 2.3E-15 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Thivi_0005 82b1454ae8ce9e006d4087e325200b13 228 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 124 185 1.2E-6 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 SMART SM00419 170 218 1.2E-4 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 Gene3D G3DSA:1.10.10.10 157 225 5.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 Pfam PF13545 Crp-like helix-turn-helix domain 158 224 4.4E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 SUPERFAMILY SSF51206 11 121 4.32E-12 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 SUPERFAMILY SSF46785 156 230 2.11E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2569 ad8e71a5c87e6cf16ff3708d04628c97 247 Gene3D G3DSA:2.60.120.10 10 156 2.7E-7 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_1963 d175638af3fd81919540af6453a2f5bb 357 SUPERFAMILY SSF52540 54 266 4.13E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1963 d175638af3fd81919540af6453a2f5bb 357 SMART SM00382 81 265 6.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1963 d175638af3fd81919540af6453a2f5bb 357 Pfam PF00005 ABC transporter 72 215 1.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1963 d175638af3fd81919540af6453a2f5bb 357 Gene3D G3DSA:3.40.50.300 52 276 2.6E-62 T 13-10-2018 Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 SUPERFAMILY SSF51735 4 245 2.84E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 5.5E-4 T 13-10-2018 Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 243 7.4E-99 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 2.2E-63 T 13-10-2018 Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 Gene3D G3DSA:3.40.50.720 1 246 8.4E-81 T 13-10-2018 Thivi_0018 78a8fbb48bcaf7809a99df2d35a151b5 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 Gene3D G3DSA:2.40.50.100 32 180 5.6E-35 T 13-10-2018 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 237 256 9.7E-5 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 44 64 9.7E-5 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 242 4.9E-38 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 SUPERFAMILY SSF111369 22 244 5.89E-21 T 13-10-2018 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 Gene3D G3DSA:2.40.30.170 22 250 5.6E-35 T 13-10-2018 Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 209 2.6E-10 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2376 51aa08a0c70e266a56b45f9e1e7652da 256 Gene3D G3DSA:1.10.287.470 66 143 5.6E-35 T 13-10-2018 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 SMART SM00448 1 112 2.9E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 Gene3D G3DSA:1.10.10.10 122 219 2.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-39 T 13-10-2018 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 SMART SM00862 145 216 1.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 3.8E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 Pfam PF00072 Response regulator receiver domain 3 112 3.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4474 4ce96873f7dc00eb51ac847da9109a60 221 SUPERFAMILY SSF52172 1 176 1.42E-37 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3937 5cd28da914d12443a8687c089328d558 343 Gene3D G3DSA:3.30.70.20 122 183 2.5E-51 T 13-10-2018 Thivi_3937 5cd28da914d12443a8687c089328d558 343 SUPERFAMILY SSF54862 38 325 1.67E-63 T 13-10-2018 Thivi_3937 5cd28da914d12443a8687c089328d558 343 Gene3D G3DSA:3.30.70.20 39 226 2.5E-51 T 13-10-2018 Thivi_3937 5cd28da914d12443a8687c089328d558 343 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 153 164 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3937 5cd28da914d12443a8687c089328d558 343 Pfam PF13247 4Fe-4S dicluster domain 114 210 1.4E-23 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4013 83393408f4b2c4b14e6aca5d5281a3bd 284 Pfam PF02649 Type I GTP cyclohydrolase folE2 19 267 1.7E-96 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Thivi_4013 83393408f4b2c4b14e6aca5d5281a3bd 284 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 18 272 37.611 T 13-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Thivi_4013 83393408f4b2c4b14e6aca5d5281a3bd 284 Gene3D G3DSA:3.10.270.10 17 271 1.8E-101 T 13-10-2018 Thivi_0338 734db89f1bc18b9ccf607570d496f384 260 Pfam PF13614 AAA domain 7 182 1.4E-31 T 13-10-2018 IPR025669 AAA domain Thivi_0338 734db89f1bc18b9ccf607570d496f384 260 Gene3D G3DSA:3.40.50.300 2 259 2.9E-57 T 13-10-2018 Thivi_0338 734db89f1bc18b9ccf607570d496f384 260 SUPERFAMILY SSF52540 4 257 5.57E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0338 734db89f1bc18b9ccf607570d496f384 260 PIRSF PIRSF009320 5 50 4.9E-14 T 13-10-2018 Thivi_0338 734db89f1bc18b9ccf607570d496f384 260 PIRSF PIRSF009320 101 258 9.8E-6 T 13-10-2018 Thivi_4209 fc26d5cf264be15c3c2640e6f1569802 66 Gene3D G3DSA:1.10.287.310 1 62 1.4E-26 T 13-10-2018 Thivi_4209 fc26d5cf264be15c3c2640e6f1569802 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.287 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4209 fc26d5cf264be15c3c2640e6f1569802 66 SUPERFAMILY SSF46561 1 61 5.76E-22 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4209 fc26d5cf264be15c3c2640e6f1569802 66 Pfam PF00831 Ribosomal L29 protein 4 59 5.7E-23 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4209 fc26d5cf264be15c3c2640e6f1569802 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 4.8E-21 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_2515 db6c9f42d8f38c1bde62c24bac74aafd 309 SUPERFAMILY SSF53807 20 306 3.19E-80 T 13-10-2018 Thivi_2515 db6c9f42d8f38c1bde62c24bac74aafd 309 Gene3D G3DSA:3.40.50.1980 208 309 4.3E-34 T 13-10-2018 Thivi_2515 db6c9f42d8f38c1bde62c24bac74aafd 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 306 7.4E-60 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Thivi_2515 db6c9f42d8f38c1bde62c24bac74aafd 309 Gene3D G3DSA:3.40.50.1980 20 205 7.5E-50 T 13-10-2018 Thivi_2402 48cce7e7e6461b1ddac98d150ec588ee 306 Pfam PF12291 Protein of unknown function (DUF3623) 1 255 5.4E-114 T 13-10-2018 IPR017496 Photosynthetic complex assembly protein 2, putative Thivi_2402 48cce7e7e6461b1ddac98d150ec588ee 306 TIGRFAM TIGR03055 photo_alph_chp2: putative photosynthetic complex assembly protein 2 7 249 9.5E-91 T 13-10-2018 IPR017496 Photosynthetic complex assembly protein 2, putative Thivi_1654 cd936e0bfebbb5646b12c265f4dde432 290 Pfam PF14491 Protein of unknown function (DUF4435) 25 228 5.9E-14 T 13-10-2018 IPR029492 Domain of unknown function DUF4435 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 Gene3D G3DSA:3.40.50.720 129 275 2.3E-99 T 13-10-2018 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 SMART SM00829 10 329 4.4E-42 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 Gene3D G3DSA:3.90.180.10 10 325 2.3E-99 T 13-10-2018 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 7.0E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 SUPERFAMILY SSF50129 1 150 5.02E-37 T 13-10-2018 IPR011032 GroES-like superfamily Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 Pfam PF13602 Zinc-binding dehydrogenase 189 329 1.1E-30 T 13-10-2018 Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 SUPERFAMILY SSF51735 118 299 2.77E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3845 e199e14de643fd83ecbdb1d09a146409 332 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 SUPERFAMILY SSF109755 10 220 4.4E-54 T 13-10-2018 Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 Gene3D G3DSA:1.20.58.220 7 221 3.4E-57 T 13-10-2018 IPR038078 PhoU-like domain superfamily Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 9 217 1.0E-49 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 Pfam PF01895 PhoU domain 20 106 2.0E-16 T 13-10-2018 IPR026022 PhoU domain Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 Pfam PF01895 PhoU domain 125 209 7.9E-14 T 13-10-2018 IPR026022 PhoU domain Thivi_0528 0bcdf494dce2f1a884b54d850381d2c4 221 PIRSF PIRSF003107 1 221 2.5E-53 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Thivi_0023 190c1b725e9d0aefbb1b8dc5a407f370 223 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 6 201 3.4E-50 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Thivi_0023 190c1b725e9d0aefbb1b8dc5a407f370 223 Gene3D G3DSA:3.40.50.300 3 211 2.2E-64 T 13-10-2018 Thivi_0023 190c1b725e9d0aefbb1b8dc5a407f370 223 Pfam PF02223 Thymidylate kinase 12 200 9.6E-48 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Thivi_0023 190c1b725e9d0aefbb1b8dc5a407f370 223 SUPERFAMILY SSF52540 5 211 1.5E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0023 190c1b725e9d0aefbb1b8dc5a407f370 223 Hamap MF_00165 Thymidylate kinase [tmk]. 8 210 30.31 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Thivi_4507 8d55d3c37535d845a9626ebb14deb002 115 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 6 99 2.0E-24 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA Thivi_4507 8d55d3c37535d845a9626ebb14deb002 115 Pfam PF11756 Nitrous oxide-stimulated promoter 6 109 9.6E-40 T 13-10-2018 IPR020483 Uncharacterised protein family YgbA Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 6.5E-41 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 Gene3D G3DSA:3.40.50.720 1 182 8.7E-53 T 13-10-2018 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 184 215 4.4E-9 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 338 5.1E-122 T 13-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 SUPERFAMILY SSF48179 182 332 1.93E-35 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 Gene3D G3DSA:1.10.1040.10 183 336 1.3E-56 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 SUPERFAMILY SSF51735 1 156 2.41E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 SMART SM01350 184 318 1.3E-5 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 111 136 4.0E-16 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 4.0E-16 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Thivi_4625 7465769afc4f61792d331fc6513a21d3 338 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 4.0E-16 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Thivi_2705 93acaba5842140b004139d339b263058 405 Pfam PF07690 Major Facilitator Superfamily 20 249 7.4E-26 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_2705 93acaba5842140b004139d339b263058 405 SUPERFAMILY SSF103473 8 388 1.44E-56 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_2705 93acaba5842140b004139d339b263058 405 Gene3D G3DSA:1.20.1250.20 212 394 2.2E-22 T 13-10-2018 Thivi_2705 93acaba5842140b004139d339b263058 405 Gene3D G3DSA:1.20.1250.20 8 198 3.7E-23 T 13-10-2018 Thivi_4040 1cd37e8d94bf763558da9e406631bba4 225 Pfam PF13578 Methyltransferase domain 84 188 5.0E-15 T 13-10-2018 Thivi_4040 1cd37e8d94bf763558da9e406631bba4 225 Gene3D G3DSA:3.40.50.150 50 223 3.4E-22 T 13-10-2018 Thivi_4040 1cd37e8d94bf763558da9e406631bba4 225 SUPERFAMILY SSF53335 57 192 7.56E-17 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 256 1.8E-22 T 13-10-2018 IPR000014 PAS domain Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 125 3.2E-18 T 13-10-2018 IPR000014 PAS domain Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SUPERFAMILY SSF55874 326 495 3.01E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00388 269 337 2.2E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Pfam PF13426 PAS domain 143 248 2.4E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SUPERFAMILY SSF47384 253 338 1.96E-23 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00387 383 497 4.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Gene3D G3DSA:3.30.450.20 5 131 4.0E-24 T 13-10-2018 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 337 3.0E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 496 1.3E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Gene3D G3DSA:1.10.287.130 255 337 1.6E-24 T 13-10-2018 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Pfam PF00989 PAS fold 11 114 1.1E-12 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00091 8 74 1.5E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00091 133 199 3.1E-10 T 13-10-2018 IPR000014 PAS domain Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Gene3D G3DSA:3.30.450.20 132 251 6.6E-28 T 13-10-2018 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 Gene3D G3DSA:3.30.565.10 338 496 2.0E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00086 80 122 0.33 T 13-10-2018 IPR001610 PAC motif Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SMART SM00086 209 249 0.38 T 13-10-2018 IPR001610 PAC motif Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SUPERFAMILY SSF55785 144 258 6.05E-28 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1319 7e65d051ec4bd111323abcd1cc7247a5 497 SUPERFAMILY SSF55785 10 120 2.09E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 SMART SM00487 10 195 3.1E-21 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 SMART SM00490 235 338 3.8E-16 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Pfam PF00271 Helicase conserved C-terminal domain 217 338 5.8E-13 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 SUPERFAMILY SSF52540 24 348 1.31E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 SMART SM00847 398 495 9.0E-11 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Gene3D G3DSA:3.40.50.300 189 354 2.7E-49 T 13-10-2018 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Gene3D G3DSA:3.40.50.300 5 188 1.9E-54 T 13-10-2018 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 13 833 1.2E-279 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Gene3D G3DSA:1.20.120.1080 383 486 3.4E-12 T 13-10-2018 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Pfam PF04408 Helicase associated domain (HA2) 399 483 3.9E-15 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 PIRSF PIRSF005496 9 841 9.3E-294 T 13-10-2018 Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Pfam PF08482 ATP-dependent helicase C-terminal 695 827 2.0E-52 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Thivi_2415 75705a8898af1d7fa9623afee6b73915 846 Pfam PF00270 DEAD/DEAH box helicase 21 174 1.3E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 129 292 3.0E-55 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 30 292 2.6E-90 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 Gene3D G3DSA:3.90.1170.20 25 292 5.8E-107 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 39 125 9.2E-22 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 SUPERFAMILY SSF54675 20 127 1.65E-28 T 13-10-2018 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 SUPERFAMILY SSF51690 129 293 9.03E-58 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 PIRSF PIRSF006250 21 296 1.4E-92 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Thivi_3094 b6445da1f8e4f730ec152ce306a4985d 296 Gene3D G3DSA:3.20.20.70 137 283 5.8E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0857 55bf70d12c2b442c2a15f85d925dbb12 145 SUPERFAMILY SSF51735 5 125 1.02E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0857 55bf70d12c2b442c2a15f85d925dbb12 145 Pfam PF13380 CoA binding domain 13 122 3.7E-11 T 13-10-2018 IPR003781 CoA-binding GO:0048037 Thivi_0857 55bf70d12c2b442c2a15f85d925dbb12 145 Gene3D G3DSA:3.40.50.720 1 126 4.5E-19 T 13-10-2018 Thivi_4000 738626ad9398f1236294194d73576b5f 475 SMART SM00646 225 380 2.7E-58 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Thivi_4000 738626ad9398f1236294194d73576b5f 475 Gene3D G3DSA:2.60.40.3500 16 128 2.2E-21 T 13-10-2018 Thivi_4000 738626ad9398f1236294194d73576b5f 475 SUPERFAMILY SSF54106 428 472 8.37E-10 T 13-10-2018 Thivi_4000 738626ad9398f1236294194d73576b5f 475 Gene3D G3DSA:3.40.630.40 151 388 3.9E-78 T 13-10-2018 Thivi_4000 738626ad9398f1236294194d73576b5f 475 Gene3D G3DSA:3.10.350.10 415 475 6.7E-15 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_4000 738626ad9398f1236294194d73576b5f 475 SUPERFAMILY SSF53187 164 383 5.34E-53 T 13-10-2018 Thivi_4000 738626ad9398f1236294194d73576b5f 475 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 165 380 5.2E-49 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Thivi_4000 738626ad9398f1236294194d73576b5f 475 SMART SM00257 428 472 1.5E-11 T 13-10-2018 IPR018392 LysM domain Thivi_4000 738626ad9398f1236294194d73576b5f 475 Pfam PF01476 LysM domain 429 472 6.0E-11 T 13-10-2018 IPR018392 LysM domain Thivi_4000 738626ad9398f1236294194d73576b5f 475 Pfam PF11741 AMIN domain 30 125 3.7E-12 T 13-10-2018 IPR021731 AMIN domain Thivi_2697 9048495e565e871daa297891586ea2c4 143 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 25 136 3.7E-31 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_2697 9048495e565e871daa297891586ea2c4 143 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 23 124 7.0E-18 T 13-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal Thivi_2697 9048495e565e871daa297891586ea2c4 143 Gene3D G3DSA:3.30.1370.140 20 118 3.7E-29 T 13-10-2018 IPR038527 HupH, C-terminal domain superfamily Thivi_0518 cec55ddef248aaceda06d535987e4012 243 SUPERFAMILY SSF53335 23 232 8.44E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0518 cec55ddef248aaceda06d535987e4012 243 Pfam PF13489 Methyltransferase domain 37 212 1.5E-15 T 13-10-2018 Thivi_0518 cec55ddef248aaceda06d535987e4012 243 Gene3D G3DSA:3.40.50.150 7 216 2.4E-28 T 13-10-2018 Thivi_1360 99faac338ef979fdef475ab879156d08 280 SUPERFAMILY SSF52540 148 268 3.42E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1360 99faac338ef979fdef475ab879156d08 280 Pfam PF03618 Kinase/pyrophosphorylase 5 262 4.3E-72 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Thivi_1360 99faac338ef979fdef475ab879156d08 280 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 269 70.072 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 SMART SM00382 26 204 5.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 Pfam PF00005 ABC transporter 18 158 6.9E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 Gene3D G3DSA:3.40.50.300 1 199 1.4E-44 T 13-10-2018 Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 SUPERFAMILY SSF52540 2 189 9.27E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3063 5371d68303eb48e8f1c495c85723ea9d 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 201 1.4E-68 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Thivi_1197 542079098737700875a581b6d11f701e 374 Pfam PF01609 Transposase DDE domain 105 330 2.0E-13 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1197 542079098737700875a581b6d11f701e 374 Pfam PF13808 DDE_Tnp_1-associated 10 97 1.7E-30 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 PIRSF PIRSF000456 1 258 1.0E-98 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 254 3.9E-98 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 Gene3D G3DSA:2.160.10.10 2 192 9.2E-46 T 13-10-2018 Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 SUPERFAMILY SSF51161 2 254 1.87E-64 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 Gene3D G3DSA:1.20.1180.10 193 256 1.3E-20 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 255 3.0E-27 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 34 1.4E-4 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_1113 379490cb8bf78f06048d1d34dfac5ca6 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 138 2.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 SUPERFAMILY SSF117143 79 443 3.27E-65 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 Gene3D G3DSA:2.60.98.20 206 366 5.1E-21 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 466 8.7E-95 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 Pfam PF07559 Flagellar basal body protein FlaE 221 365 2.8E-25 T 13-10-2018 IPR011491 Flagellar hook protein FlgE Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 Pfam PF00460 Flagella basal body rod protein 3 33 3.2E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Thivi_0398 36e1ed393a91839b729a5faa92fbf519 484 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 405 483 1.8E-18 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_1356 3eed67156fce97a39a5bf6493fb83e82 167 Pfam PF07798 Protein of unknown function (DUF1640) 73 167 1.8E-10 T 13-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like Thivi_1823 532d70b62e20c0d8883b52639360a8c0 78 Gene3D G3DSA:1.20.58.660 11 78 6.2E-19 T 13-10-2018 Thivi_1823 532d70b62e20c0d8883b52639360a8c0 78 Pfam PF04325 Protein of unknown function (DUF465) 29 76 5.9E-12 T 13-10-2018 IPR007420 Protein of unknown function DUF465 Thivi_4252 56fc79b671bd47a9fe7c73fbab96ae90 400 Pfam PF13692 Glycosyl transferases group 1 229 365 2.1E-30 T 13-10-2018 Thivi_4252 56fc79b671bd47a9fe7c73fbab96ae90 400 Gene3D G3DSA:3.40.50.2000 210 383 3.1E-20 T 13-10-2018 Thivi_4252 56fc79b671bd47a9fe7c73fbab96ae90 400 Gene3D G3DSA:3.40.50.2000 166 394 3.1E-20 T 13-10-2018 Thivi_4252 56fc79b671bd47a9fe7c73fbab96ae90 400 SUPERFAMILY SSF53756 16 397 1.7E-28 T 13-10-2018 Thivi_4252 56fc79b671bd47a9fe7c73fbab96ae90 400 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 397 2.7E-163 T 13-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 Thivi_2507 07c96eec4e95b57f74a1419b5b978b34 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 34 186 2.3E-9 T 13-10-2018 Thivi_2507 07c96eec4e95b57f74a1419b5b978b34 227 Gene3D G3DSA:3.40.50.1000 6 197 5.3E-21 T 13-10-2018 IPR023214 HAD superfamily Thivi_2507 07c96eec4e95b57f74a1419b5b978b34 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 185 2.1E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_2507 07c96eec4e95b57f74a1419b5b978b34 227 SUPERFAMILY SSF56784 1 214 1.13E-39 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_1412 d071157c94aa586f210f5b4c10cafc1b 1265 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 925 1262 6.4E-44 T 13-10-2018 IPR007452 Translocation and assembly module TamB Thivi_2170 14ce16f839676d0bae51152365296ff4 397 Gene3D G3DSA:2.60.60.30 20 167 3.3E-27 T 13-10-2018 Thivi_2170 14ce16f839676d0bae51152365296ff4 397 PIRSF PIRSF037118 1 396 1.7E-135 T 13-10-2018 IPR017115 Tellurite resistance, TerA Thivi_2170 14ce16f839676d0bae51152365296ff4 397 Pfam PF02342 TerD domain 1 169 3.2E-27 T 13-10-2018 IPR003325 TerD domain Thivi_2473 99a441072adb09170bd74d6a7bd19ddf 449 Gene3D G3DSA:3.40.50.620 14 222 2.6E-41 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2473 99a441072adb09170bd74d6a7bd19ddf 449 SUPERFAMILY SSF52402 20 220 2.87E-28 T 13-10-2018 Thivi_2473 99a441072adb09170bd74d6a7bd19ddf 449 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 37 263 5.2E-15 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Thivi_2473 99a441072adb09170bd74d6a7bd19ddf 449 TIGRFAM TIGR03183 DNA_S_dndC: putative sulfurtransferase DndC 26 368 4.8E-108 T 13-10-2018 IPR017598 Sulphur transferase DndC, putative Thivi_3847 f027bada335f26cce41f4c0ad02c14bd 266 Pfam PF01171 PP-loop family 35 203 1.1E-17 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Thivi_3847 f027bada335f26cce41f4c0ad02c14bd 266 Gene3D G3DSA:3.40.50.620 11 246 2.2E-46 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3847 f027bada335f26cce41f4c0ad02c14bd 266 SUPERFAMILY SSF52402 12 211 1.7E-47 T 13-10-2018 Thivi_3847 f027bada335f26cce41f4c0ad02c14bd 266 PIRSF PIRSF004976 5 252 6.1E-55 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 95 2.3E-16 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 SUPERFAMILY SSF53706 41 659 2.09E-192 T 13-10-2018 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 SUPERFAMILY SSF50692 718 858 4.97E-41 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Gene3D G3DSA:3.30.200.210 42 690 0.0 T 13-10-2018 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Gene3D G3DSA:3.40.228.10 189 733 0.0 T 13-10-2018 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Pfam PF01568 Molydopterin dinucleotide binding domain 744 852 5.4E-24 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 SMART SM00926 42 96 8.8E-15 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Gene3D G3DSA:3.40.50.740 99 642 0.0 T 13-10-2018 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Pfam PF00384 Molybdopterin oxidoreductase 99 582 9.9E-78 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Gene3D G3DSA:2.40.40.20 734 857 2.4E-46 T 13-10-2018 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 47 64 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 858 31.326 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Thivi_4245 cbf4d1898653019af3160932212b2f37 858 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 25 2.5E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_4245 cbf4d1898653019af3160932212b2f37 858 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 857 0.0 T 13-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 4.2E-251 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 SUPERFAMILY SSF143975 3 420 3.4E-136 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 Pfam PF00920 Dehydratase family 34 607 2.5E-222 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 Gene3D G3DSA:3.50.30.80 421 572 1.5E-55 T 13-10-2018 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.552 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Thivi_1905 f6231e4b73cb2d7b1ec01c8e71bf1420 617 SUPERFAMILY SSF52016 421 612 1.57E-59 T 13-10-2018 Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 SMART SM00304 207 259 2.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 307 471 1.4E-49 T 13-10-2018 IPR000160 GGDEF domain Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 Pfam PF00990 Diguanylate cyclase, GGDEF domain 312 467 1.6E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 SUPERFAMILY SSF55073 316 471 1.26E-48 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 SUPERFAMILY SSF158472 209 256 1.31E-7 T 13-10-2018 Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 SMART SM00267 300 471 5.4E-61 T 13-10-2018 IPR000160 GGDEF domain Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 Pfam PF00672 HAMP domain 209 255 4.6E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 Gene3D G3DSA:1.20.1480.50 171 263 2.6E-8 T 13-10-2018 Thivi_0065 49fd409fe3fe6023a72c8102e34dc954 484 Gene3D G3DSA:3.30.70.270 305 475 9.3E-57 T 13-10-2018 Thivi_2149 a62a7e03797166ce9729935208b9f726 153 Pfam PF00072 Response regulator receiver domain 10 130 9.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2149 a62a7e03797166ce9729935208b9f726 153 Gene3D G3DSA:3.40.50.2300 3 149 5.3E-33 T 13-10-2018 Thivi_2149 a62a7e03797166ce9729935208b9f726 153 SMART SM00448 8 132 1.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2149 a62a7e03797166ce9729935208b9f726 153 SUPERFAMILY SSF52172 9 135 2.56E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 468 3.3E-234 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 Pfam PF00330 Aconitase family (aconitate hydratase) 8 461 4.9E-154 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 Gene3D G3DSA:3.30.499.10 332 469 1.6E-46 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 SUPERFAMILY SSF53732 4 468 1.7E-162 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 469 59.359 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 ProSitePatterns PS01244 Aconitase family signature 2. 403 416 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 Gene3D G3DSA:3.30.499.20 5 289 1.9E-97 T 13-10-2018 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 85 98 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 122 135 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 289 303 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 346 357 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 136 151 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 212 225 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 111 119 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 403 416 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_0924 0b60e10ad1f0ea5fe7e8c4ca5ff52d15 469 PRINTS PR00415 Aconitase family signature 198 211 3.4E-49 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1242 fddf19e120965ac2a68e0819c5f807a2 413 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 255 334 1.1E-9 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain Thivi_1242 fddf19e120965ac2a68e0819c5f807a2 413 Pfam PF13353 4Fe-4S single cluster domain 15 131 1.4E-7 T 13-10-2018 Thivi_1242 fddf19e120965ac2a68e0819c5f807a2 413 Gene3D G3DSA:3.20.20.70 8 354 1.4E-46 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_1242 fddf19e120965ac2a68e0819c5f807a2 413 SUPERFAMILY SSF102114 12 327 5.23E-29 T 13-10-2018 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 Pfam PF01750 Hydrogenase maturation protease 23 147 3.8E-22 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 SUPERFAMILY SSF53163 4 156 1.91E-38 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 151 1.8E-39 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 PRINTS PR00446 Hydrogen uptake protein signature 58 68 1.4E-13 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 PRINTS PR00446 Hydrogen uptake protein signature 69 85 1.4E-13 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 PRINTS PR00446 Hydrogen uptake protein signature 5 17 1.4E-13 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 PRINTS PR00446 Hydrogen uptake protein signature 37 54 1.4E-13 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 PRINTS PR00446 Hydrogen uptake protein signature 17 28 1.4E-13 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_4358 b6dbf73affec6b3db7caee3746e4e140 162 Gene3D G3DSA:3.40.50.1450 4 160 4.4E-39 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_1475 94b36269743575189a16757707dd7089 862 Pfam PF13476 AAA domain 255 461 2.2E-8 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Thivi_1475 94b36269743575189a16757707dd7089 862 Gene3D G3DSA:3.20.20.140 9 208 8.7E-16 T 13-10-2018 Thivi_1475 94b36269743575189a16757707dd7089 862 SUPERFAMILY SSF89550 21 149 9.81E-13 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Thivi_1475 94b36269743575189a16757707dd7089 862 Gene3D G3DSA:3.40.50.300 245 490 9.3E-16 T 13-10-2018 Thivi_1475 94b36269743575189a16757707dd7089 862 SUPERFAMILY SSF52540 245 808 2.0E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 18 456 2.5E-181 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Gene3D G3DSA:3.40.50.11540 151 303 1.5E-16 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 294 6.3E-53 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 SUPERFAMILY SSF142019 101 314 1.96E-63 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 427 438 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Pfam PF13375 RnfC Barrel sandwich hybrid domain 19 121 4.0E-36 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Pfam PF13237 4Fe-4S dicluster domain 387 438 5.5E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Gene3D G3DSA:1.10.1060.10 385 455 6.5E-12 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 SUPERFAMILY SSF46548 345 456 1.73E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Pfam PF10531 SLBB domain 307 356 1.3E-12 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1932 daf6ff2b81bbb4245eae54536f3e60c5 531 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 531 188.333 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Thivi_4156 352b1c1737b6de323e2dc882c3546cee 206 PIRSF PIRSF001488 3 204 2.5E-37 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Thivi_4156 352b1c1737b6de323e2dc882c3546cee 206 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_4156 352b1c1737b6de323e2dc882c3546cee 206 Pfam PF01323 DSBA-like thioredoxin domain 91 179 2.5E-16 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Thivi_4156 352b1c1737b6de323e2dc882c3546cee 206 SUPERFAMILY SSF52833 23 198 2.03E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_4156 352b1c1737b6de323e2dc882c3546cee 206 Gene3D G3DSA:3.40.30.10 17 203 2.6E-51 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 43 711 2.1E-231 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 SUPERFAMILY SSF56024 355 530 1.49E-49 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 SUPERFAMILY SSF143724 145 345 5.89E-56 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Hamap MF_00347 Polyphosphate kinase [ppk]. 40 716 26.21 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Gene3D G3DSA:3.30.870.10 354 536 8.5E-66 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Pfam PF13090 Polyphosphate kinase C-terminal domain 365 710 6.8E-142 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 PIRSF PIRSF015589 23 730 5.7E-268 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Gene3D G3DSA:3.30.870.10 539 719 6.3E-63 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Gene3D G3DSA:3.30.1840.10 37 346 9.5E-99 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Pfam PF13089 Polyphosphate kinase N-terminal domain 43 147 5.6E-36 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 SUPERFAMILY SSF140356 39 141 6.54E-36 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 SUPERFAMILY SSF56024 535 715 4.49E-64 T 13-10-2018 Thivi_3572 ef2a78b0880f37f84e369273305df021 747 Pfam PF02503 Polyphosphate kinase middle domain 158 355 1.1E-57 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 Gene3D G3DSA:1.10.287.470 82 153 4.3E-61 T 13-10-2018 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 Gene3D G3DSA:2.40.30.170 36 274 4.3E-61 T 13-10-2018 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 25 336 3.5E-60 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 SUPERFAMILY SSF111369 37 270 3.01E-25 T 13-10-2018 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 Gene3D G3DSA:2.40.50.100 48 188 4.3E-61 T 13-10-2018 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 Gene3D G3DSA:2.40.420.20 25 332 4.3E-61 T 13-10-2018 Thivi_3096 7030b066cd7e234269e26016836e87e6 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 268 1.6E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 328 5.3E-108 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Gene3D G3DSA:2.160.10.10 99 308 7.0E-62 T 13-10-2018 Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 87 6.6E-18 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 SUPERFAMILY SSF51161 37 317 5.38E-76 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 5.9E-7 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 142 6.5E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Gene3D G3DSA:3.40.1390.10 1 95 2.9E-25 T 13-10-2018 Thivi_2755 47a5cc378c46a21df2c9846a344ff014 348 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 325 36.054 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 230 241 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 Pfam PF12801 4Fe-4S binding domain 83 123 2.4E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 Pfam PF12801 4Fe-4S binding domain 178 216 1.6E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 SUPERFAMILY SSF54862 93 284 7.67E-17 T 13-10-2018 Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 Gene3D G3DSA:1.10.1060.10 221 286 2.4E-6 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_4243 6cd0359c8219d7c439f4ddf734cc950e 324 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 284 5.2E-100 T 13-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 SUPERFAMILY SSF55194 2 183 1.57E-70 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 Gene3D G3DSA:1.10.132.20 13 182 2.4E-67 T 13-10-2018 Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.7E-73 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 Pfam PF01765 Ribosome recycling factor 20 183 1.1E-63 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.639 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Thivi_2748 63e80ac6de38b3515e9f31b509578c5d 185 Gene3D G3DSA:3.30.1360.40 31 105 2.4E-67 T 13-10-2018 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 SUPERFAMILY SSF55200 91 176 1.7E-31 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 175 3.4E-35 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 14 83 1.4E-27 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 14 177 2.9E-65 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 SUPERFAMILY SSF54364 12 85 4.58E-27 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 Gene3D G3DSA:3.30.110.10 83 177 1.7E-36 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 ProSitePatterns PS00938 Initiation factor 3 signature. 65 78 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 8 177 29.871 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Thivi_1564 b0dc8615395aa43629f92b159a99988c 177 Gene3D G3DSA:3.10.20.80 9 82 1.8E-29 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.0E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.639 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 SUPERFAMILY SSF55282 3 178 5.42E-76 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 Pfam PF00281 Ribosomal protein L5 24 80 6.0E-27 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 PIRSF PIRSF002161 1 179 3.6E-64 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4213 3d947de9e4cda1c68672549bdbde40fe 179 Gene3D G3DSA:3.30.1440.10 1 179 1.6E-76 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 Gene3D G3DSA:1.10.20.140 129 200 3.6E-96 T 13-10-2018 Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 Gene3D G3DSA:3.40.50.300 26 307 3.6E-96 T 13-10-2018 Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 22 308 6.1E-96 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 Pfam PF01715 IPP transferase 55 302 3.7E-79 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 SUPERFAMILY SSF52540 23 166 1.3E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0408 2738ad89f1d14a95d0ea44238bcb92fb 328 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 22 319 29.107 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 146 166 2.2E-21 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 337 354 2.2E-21 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 379 399 2.2E-21 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 356 374 2.2E-21 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 87 101 2.2E-21 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 91 97 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 SUPERFAMILY SSF53335 65 401 8.44E-63 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3144 291205bf8876e5f0e744eeee9e85143d 671 Pfam PF01555 DNA methylase 88 395 2.6E-47 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 175 187 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 173 267 3.0E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 SUPERFAMILY SSF56645 49 274 1.06E-48 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Pfam PF12186 Acyl-CoA dehydrogenase C terminal 459 564 6.0E-8 T 13-10-2018 IPR020964 Acyl-CoA dehydrogenase, C-terminal Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 413 432 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 SUPERFAMILY SSF47203 282 454 3.7E-44 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 54 168 3.3E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Gene3D G3DSA:1.20.120.470 449 568 7.1E-9 T 13-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Gene3D G3DSA:1.20.140.10 284 448 2.1E-48 T 13-10-2018 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Gene3D G3DSA:2.40.110.10 172 283 3.0E-25 T 13-10-2018 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Gene3D G3DSA:1.10.540.10 48 170 3.3E-17 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 447 2.8E-30 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Thivi_0637 bb2c18e7d25a3c56f8416520561197b3 573 SUPERFAMILY SSF158494 446 565 6.41E-13 T 13-10-2018 IPR036797 Acyl-CoA dehydrogenase, C-terminal domain superfamily Thivi_2306 7e649be7934c4b2938d9f9b6246efd4d 280 Gene3D G3DSA:2.60.40.2250 9 255 5.7E-72 T 13-10-2018 Thivi_2306 7e649be7934c4b2938d9f9b6246efd4d 280 SUPERFAMILY SSF54001 49 257 1.96E-42 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_2306 7e649be7934c4b2938d9f9b6246efd4d 280 Pfam PF01841 Transglutaminase-like superfamily 129 225 2.1E-20 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_2306 7e649be7934c4b2938d9f9b6246efd4d 280 SMART SM00460 161 227 2.1E-15 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_2306 7e649be7934c4b2938d9f9b6246efd4d 280 Gene3D G3DSA:3.10.620.30 79 247 5.7E-72 T 13-10-2018 Thivi_0272 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0272 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_0272 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF01609 Transposase DDE domain 203 367 2.9E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0272 51c0c6ce7ea9765fdf1fed06f34d719c 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4297 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_4297 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_4297 51c0c6ce7ea9765fdf1fed06f34d719c 381 Pfam PF01609 Transposase DDE domain 203 367 2.9E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_4297 51c0c6ce7ea9765fdf1fed06f34d719c 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0944 cefed0462bf7a74fef3240719a51145c 379 Gene3D G3DSA:3.40.630.30 178 318 1.3E-6 T 13-10-2018 Thivi_0944 cefed0462bf7a74fef3240719a51145c 379 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 10 377 3.3E-150 T 13-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition Thivi_0944 cefed0462bf7a74fef3240719a51145c 379 SUPERFAMILY SSF55729 180 352 2.16E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 Gene3D G3DSA:3.40.640.10 69 317 1.0E-178 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 Pfam PF00202 Aminotransferase class-III 34 395 4.7E-75 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 SUPERFAMILY SSF53383 2 421 4.66E-134 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 Gene3D G3DSA:3.90.1150.10 7 417 1.0E-178 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 106.315 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Thivi_3076 8d7f9d398dc14072d6dfeee3482dd696 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 423 1.1E-193 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 Gene3D G3DSA:3.30.200.20 3 104 1.2E-32 T 13-10-2018 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 297 3.4E-77 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 293 25.605 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 Pfam PF01259 SAICAR synthetase 15 267 9.9E-101 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 ProSitePatterns PS01058 SAICAR synthetase signature 2. 205 213 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 ProSitePatterns PS01057 SAICAR synthetase signature 1. 106 120 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 Gene3D G3DSA:3.30.470.20 106 249 6.8E-60 T 13-10-2018 Thivi_4149 e865c3093d0fa1d28a58ee952736f53d 300 SUPERFAMILY SSF56104 4 294 8.17E-100 T 13-10-2018 Thivi_3379 32ea4e9e7f48379a99a2d29bb3d910b9 182 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.221 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Thivi_3379 32ea4e9e7f48379a99a2d29bb3d910b9 182 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.3E-53 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Thivi_3379 32ea4e9e7f48379a99a2d29bb3d910b9 182 Gene3D G3DSA:3.90.80.10 1 175 1.2E-67 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Thivi_3379 32ea4e9e7f48379a99a2d29bb3d910b9 182 SUPERFAMILY SSF50324 4 174 3.53E-66 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Thivi_3379 32ea4e9e7f48379a99a2d29bb3d910b9 182 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Thivi_3461 83a1785f946b043ea73b85d9fb22c2b4 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 313 1.1E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_3461 83a1785f946b043ea73b85d9fb22c2b4 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 310 6.9E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_3461 83a1785f946b043ea73b85d9fb22c2b4 318 Gene3D G3DSA:3.30.70.270 153 316 4.0E-53 T 13-10-2018 Thivi_3461 83a1785f946b043ea73b85d9fb22c2b4 318 SUPERFAMILY SSF55073 161 312 2.9E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_3461 83a1785f946b043ea73b85d9fb22c2b4 318 SMART SM00267 145 314 2.1E-56 T 13-10-2018 IPR000160 GGDEF domain Thivi_2788 6a7b2cce4d944a2a56d5834f15409e1e 143 Pfam PF00581 Rhodanese-like domain 44 133 8.7E-21 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2788 6a7b2cce4d944a2a56d5834f15409e1e 143 Gene3D G3DSA:3.40.250.10 40 143 2.3E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2788 6a7b2cce4d944a2a56d5834f15409e1e 143 SUPERFAMILY SSF52821 16 140 1.26E-33 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2788 6a7b2cce4d944a2a56d5834f15409e1e 143 SMART SM00450 40 137 1.1E-23 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 SUPERFAMILY SSF55785 7 72 3.49E-11 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 Gene3D G3DSA:3.30.70.270 132 311 1.4E-53 T 13-10-2018 Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 SUPERFAMILY SSF55073 150 311 1.96E-45 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 305 1.1E-46 T 13-10-2018 IPR000160 GGDEF domain Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 308 2.0E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 Gene3D G3DSA:3.30.450.20 2 131 3.8E-16 T 13-10-2018 Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 SMART SM00267 134 310 5.6E-59 T 13-10-2018 IPR000160 GGDEF domain Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 SMART SM00091 4 70 2.9E-6 T 13-10-2018 IPR000014 PAS domain Thivi_0316 5d249ba6cacab422e65165fb84e98e7d 321 Pfam PF08448 PAS fold 10 70 4.3E-7 T 13-10-2018 IPR013656 PAS fold-4 Thivi_0388 a67ff8e6bc01d015c81cd4580eb3424a 252 Gene3D G3DSA:2.30.110.10 19 129 8.1E-12 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Thivi_0388 a67ff8e6bc01d015c81cd4580eb3424a 252 Pfam PF07317 Flagellar regulator YcgR 23 125 7.1E-13 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Thivi_0388 a67ff8e6bc01d015c81cd4580eb3424a 252 Gene3D G3DSA:2.40.10.220 130 246 2.0E-16 T 13-10-2018 Thivi_3272 802da29036d644d0d912fadd3f3bb64f 158 SUPERFAMILY SSF103247 28 129 1.06E-12 T 13-10-2018 IPR035923 TT1751-like domain superfamily Thivi_3272 802da29036d644d0d912fadd3f3bb64f 158 Pfam PF03625 Domain of unknown function DUF302 60 125 4.6E-5 T 13-10-2018 IPR005180 Domain of unknown function DUF302 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 TIGRFAM TIGR01278 DPOR_BchB: light-independent protochlorophyllide reductase, B subunit 1 528 5.4E-187 T 13-10-2018 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Gene3D G3DSA:3.40.50.1980 160 248 1.7E-28 T 13-10-2018 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Gene3D G3DSA:3.40.50.1980 1 147 1.0E-44 T 13-10-2018 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 480 524 8.2E-21 T 13-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 13 419 1.9E-74 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Gene3D G3DSA:1.10.8.550 478 529 1.6E-24 T 13-10-2018 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Gene3D G3DSA:3.40.50.1980 269 449 4.5E-82 T 13-10-2018 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 Hamap MF_00353 Light-independent protochlorophyllide reductase subunit B [bchB]. 1 528 52.205 T 13-10-2018 IPR005969 Light-independent protochlorophyllide reductase, B subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 SUPERFAMILY SSF53807 3 438 3.04E-102 T 13-10-2018 Thivi_2409 98a2d7d53b82456fea9c302ba4f34819 529 PIRSF PIRSF000163 1 529 1.2E-209 T 13-10-2018 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 74 178 9.9E-19 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Gene3D G3DSA:3.40.50.300 315 592 6.5E-114 T 13-10-2018 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 409 423 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Pfam PF00437 Type II/IV secretion system protein 216 481 3.3E-85 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 SMART SM00382 342 463 6.0E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Gene3D G3DSA:3.30.300.160 95 176 4.9E-18 T 13-10-2018 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 114 588 3.7E-203 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 SUPERFAMILY SSF160246 44 175 5.23E-28 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Gene3D G3DSA:1.10.40.70 34 94 1.5E-16 T 13-10-2018 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 Gene3D G3DSA:3.30.450.90 186 314 2.2E-49 T 13-10-2018 Thivi_3002 dc1c92b767bfdf746d827fb00e1f1a75 592 SUPERFAMILY SSF52540 190 588 5.27E-103 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 97 167 5.6E-24 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 SUPERFAMILY SSF101801 94 175 5.23E-25 T 13-10-2018 IPR036429 SpoA-like superfamily Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 Gene3D G3DSA:2.30.330.10 85 177 7.0E-34 T 13-10-2018 IPR036429 SpoA-like superfamily Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 PRINTS PR00956 Flagellar motor switch protein FliN signature 114 130 8.4E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 PRINTS PR00956 Flagellar motor switch protein FliN signature 143 158 8.4E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 113 8.4E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 PRINTS PR00956 Flagellar motor switch protein FliN signature 130 143 8.4E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Thivi_0366 3a9a0f7b6a9d67891c51786ea80f99a7 177 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 94 169 5.9E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 Pfam PF00561 alpha/beta hydrolase fold 12 240 3.3E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 SUPERFAMILY SSF53474 11 252 2.61E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 197 211 1.9E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.9E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 88 1.9E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 252 37.983 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 Gene3D G3DSA:3.40.50.1820 7 253 2.8E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1764 2becef0a5dc7876ace26af003881d89e 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 7 250 5.6E-71 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Thivi_2179 441562ba0a85b67efc44cacc47f99aab 145 Pfam PF04972 BON domain 17 82 5.3E-14 T 13-10-2018 IPR007055 BON domain Thivi_2179 441562ba0a85b67efc44cacc47f99aab 145 SMART SM00257 92 141 5.6E-11 T 13-10-2018 IPR018392 LysM domain Thivi_2179 441562ba0a85b67efc44cacc47f99aab 145 Gene3D G3DSA:3.10.350.10 92 140 5.1E-14 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_2179 441562ba0a85b67efc44cacc47f99aab 145 SUPERFAMILY SSF54106 91 141 2.49E-7 T 13-10-2018 Thivi_2179 441562ba0a85b67efc44cacc47f99aab 145 Pfam PF01476 LysM domain 93 141 1.6E-12 T 13-10-2018 IPR018392 LysM domain Thivi_2562 c46c739cba4f7c8481f609f22c0e6a1d 357 PIRSF PIRSF029693 9 357 2.1E-130 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_2562 c46c739cba4f7c8481f609f22c0e6a1d 357 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 28 357 4.7E-166 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_1883 05464d1e5b521c95f2d62949729d5e3c 694 Pfam PF01433 Peptidase family M1 domain 288 426 4.9E-13 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Thivi_1883 05464d1e5b521c95f2d62949729d5e3c 694 SUPERFAMILY SSF55486 211 435 2.49E-43 T 13-10-2018 Thivi_1883 05464d1e5b521c95f2d62949729d5e3c 694 Gene3D G3DSA:1.10.390.60 205 431 3.1E-32 T 13-10-2018 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 12 509 1.9E-194 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 SUPERFAMILY SSF64158 84 307 6.54E-77 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 11 510 45.28 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 SUPERFAMILY SSF53649 10 509 1.42E-71 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 Gene3D G3DSA:3.40.720.10 12 509 2.0E-204 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 89 298 2.5E-76 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 Gene3D G3DSA:3.40.1450.10 84 310 2.0E-204 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 PIRSF PIRSF001492 5 511 9.3E-191 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Thivi_4328 4f3a614c9cff3e57a1bea3e8427320a4 515 Pfam PF01676 Metalloenzyme superfamily 12 497 1.1E-74 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.8E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.8E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.8E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 SUPERFAMILY SSF110324 2 80 3.14E-33 T 13-10-2018 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 1.0E-13 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.558 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 Gene3D G3DSA:2.40.50.100 21 85 3.0E-29 T 13-10-2018 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.0E-37 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2544 7cf465531f60f9d37d021c1b8518d3d1 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.5E-41 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SUPERFAMILY SSF55874 215 381 2.23E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 3.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 3.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 359 3.8E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SMART SM00388 162 225 5.7E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 Pfam PF00672 HAMP domain 108 158 1.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SMART SM00304 106 161 2.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 162 225 6.5E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SUPERFAMILY SSF158472 107 160 6.8E-7 T 13-10-2018 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SMART SM00387 270 381 1.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 SUPERFAMILY SSF47384 147 225 8.44E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 380 3.7E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 Gene3D G3DSA:3.30.565.10 231 383 3.9E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0033 9a2f36e70ff6e25456e761bc05dcea25 387 Gene3D G3DSA:1.10.287.130 110 226 1.9E-28 T 13-10-2018 Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 SUPERFAMILY SSF51206 15 109 3.8E-5 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 Pfam PF00027 Cyclic nucleotide-binding domain 161 247 1.2E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 Gene3D G3DSA:3.40.250.10 250 346 4.9E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 Gene3D G3DSA:2.60.120.10 127 249 1.2E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 SMART SM00450 254 347 7.5E-18 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 SUPERFAMILY SSF52821 245 343 3.67E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 Pfam PF00581 Rhodanese-like domain 259 342 2.2E-13 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 SMART SM00100 142 263 9.9E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 ProSitePatterns PS00380 Rhodanese signature 1. 278 289 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Thivi_3611 923d6d6ff4d03bb1ec7cdcd127e1b08a 350 SUPERFAMILY SSF51206 136 248 2.62E-18 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Gene3D G3DSA:4.10.950.10 196 274 2.7E-34 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 SUPERFAMILY SSF50249 3 124 1.37E-46 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4204 44a6180aad39326b441af6e9403f0428 275 SMART SM01382 124 252 7.5E-91 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Gene3D G3DSA:2.40.50.140 1 114 9.4E-48 T 13-10-2018 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Gene3D G3DSA:2.30.30.30 115 195 8.3E-32 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 9.4E-57 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.246 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 SMART SM01383 42 118 2.4E-45 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 PIRSF PIRSF002158 9 275 1.1E-102 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 SUPERFAMILY SSF50104 126 272 6.62E-61 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily Thivi_4204 44a6180aad39326b441af6e9403f0428 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 116 3.0E-32 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4204 44a6180aad39326b441af6e9403f0428 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 3.4E-126 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 Pfam PF00905 Penicillin binding protein transpeptidase domain 312 538 1.2E-13 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 Gene3D G3DSA:1.10.3810.10 51 250 1.2E-49 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 48 590 7.6E-192 T 13-10-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 SUPERFAMILY SSF56601 216 590 8.05E-80 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 SUPERFAMILY SSF53955 48 267 2.22E-61 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 Gene3D G3DSA:3.40.710.10 279 612 7.2E-68 T 13-10-2018 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 Pfam PF00912 Transglycosylase 67 234 2.8E-46 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2500 3022a48e21b7e3b0a38787af1b73827a 710 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 623 706 7.5E-17 T 13-10-2018 IPR009647 Penicillin-binding, C-terminal KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 Gene3D G3DSA:1.10.287.950 292 622 2.9E-69 T 13-10-2018 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 387 585 3.0E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 SMART SM00283 359 620 8.2E-58 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 SUPERFAMILY SSF58104 312 621 1.7E-69 T 13-10-2018 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 Pfam PF00672 HAMP domain 294 341 4.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0530 e60a933df80ec526930bfb952ef0b8c8 622 SMART SM00304 292 344 4.3E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 PIRSF PIRSF001589 82 610 2.2E-91 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 Pfam PF13537 Glutamine amidotransferase domain 85 142 1.4E-8 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 Gene3D G3DSA:3.60.20.10 68 202 9.9E-17 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 SUPERFAMILY SSF52402 212 595 1.28E-65 T 13-10-2018 Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 Pfam PF00733 Asparagine synthase 221 603 6.2E-79 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Thivi_3680 a0e5378ed50c19da74332416d6f70598 610 SUPERFAMILY SSF56235 85 205 1.76E-18 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 SUPERFAMILY SSF82114 179 313 2.62E-43 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 311 1.0E-92 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 Gene3D G3DSA:2.40.30.30 191 320 2.8E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 SMART SM00904 188 312 8.8E-58 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 Pfam PF01687 Riboflavin kinase 189 311 4.6E-37 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 SUPERFAMILY SSF52374 15 183 2.46E-27 T 13-10-2018 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 Pfam PF06574 FAD synthetase 13 172 2.8E-47 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 PIRSF PIRSF004491 1 318 2.7E-97 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Thivi_3345 f9b66ab2f813ed2d7a5d8cfd353bff5b 321 Gene3D G3DSA:3.40.50.620 1 190 7.9E-57 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 Gene3D G3DSA:3.30.450.40 82 257 4.5E-52 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 SMART SM00346 12 101 5.9E-28 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 SUPERFAMILY SSF46785 12 83 5.97E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 Pfam PF01614 Bacterial transcriptional regulator 131 232 7.7E-25 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 SUPERFAMILY SSF55781 69 254 1.44E-47 T 13-10-2018 Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 Gene3D G3DSA:1.10.10.10 1 79 3.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1956 a8dc044f71a814550a771143b64c4c4b 265 Pfam PF09339 IclR helix-turn-helix domain 15 65 4.1E-16 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 256 3.7E-55 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 SMART SM00650 19 191 2.8E-76 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 Gene3D G3DSA:3.40.50.150 1 191 3.8E-63 T 13-10-2018 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 258 53.944 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 256 3.4E-78 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 62 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 Gene3D G3DSA:1.10.8.100 194 260 5.5E-23 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Thivi_2931 219065aee67fca582bfeb4aa71210d85 276 SUPERFAMILY SSF53335 11 258 2.61E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 508 2.4E-150 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Gene3D G3DSA:1.10.268.10 372 495 7.9E-227 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 586 1.1E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 590 639 3.5E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 648 690 3.8E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 695 739 8.6E-15 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 745 789 3.0E-12 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 839 8.4E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Gene3D G3DSA:2.120.10.90 533 842 4.0E-119 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 SUPERFAMILY SSF56719 30 523 4.58E-179 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 SMART SM00434 11 501 4.4E-280 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 842 23.859 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 13-10-2018 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 SUPERFAMILY SSF101904 535 851 2.75E-106 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Gene3D G3DSA:3.90.199.10 33 523 7.9E-227 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Thivi_2120 879a945af0d9b139711d3f07e07105a4 885 Gene3D G3DSA:3.30.1360.40 236 335 7.9E-227 T 13-10-2018 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 SMART SM00382 162 301 0.0032 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Gene3D G3DSA:1.10.10.60 397 453 1.8E-17 T 13-10-2018 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Gene3D G3DSA:1.10.8.60 308 386 3.5E-19 T 13-10-2018 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Pfam PF00072 Response regulator receiver domain 6 116 1.1E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Gene3D G3DSA:3.40.50.300 129 307 2.1E-47 T 13-10-2018 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Pfam PF02954 Bacterial regulatory protein, Fis family 407 445 2.8E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Pfam PF00158 Sigma-54 interaction domain 143 303 6.7E-46 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 SUPERFAMILY SSF52172 2 186 2.42E-46 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 SUPERFAMILY SSF46689 350 449 4.93E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 SUPERFAMILY SSF52540 143 380 6.68E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 Gene3D G3DSA:3.40.50.2300 4 124 4.8E-39 T 13-10-2018 Thivi_3193 ec9dd2f2e9f1a2e9e8daf9d534946273 455 SMART SM00448 4 116 2.9E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 29 210 1.9E-32 T 13-10-2018 IPR023473 AMMECR1 Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 Gene3D G3DSA:3.30.700.20 27 129 1.8E-50 T 13-10-2018 IPR027485 AMMECR1, N-terminal Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 SUPERFAMILY SSF143447 25 204 1.7E-54 T 13-10-2018 IPR036071 AMMECR1 domain superfamily Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 Gene3D G3DSA:3.30.1490.150 130 202 1.8E-50 T 13-10-2018 Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 Pfam PF01871 AMMECR1 31 201 5.7E-44 T 13-10-2018 IPR002733 AMMECR1 domain Thivi_4548 cfbc53de3d87c2c6e118084ddc96c225 223 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 28 202 1.6E-61 T 13-10-2018 IPR027623 AmmeMemoRadiSam system protein A Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.7E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82714 775 858 8.5E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:1.20.1640.10 509 557 5.5E-149 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.70.1440 722 919 1.7E-103 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82866 293 499 6.67E-38 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.70.1320 134 327 5.5E-149 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.2090.10 773 861 1.7E-103 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.2090.10 181 273 5.5E-149 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.70.1430 619 721 1.7E-103 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:1.20.1640.10 608 1085 1.7E-103 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82693 45 126 1.07E-20 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Pfam PF00873 AcrB/AcrD/AcrF family 609 1087 3.2E-93 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Pfam PF00873 AcrB/AcrD/AcrF family 7 555 1.5E-128 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:3.30.70.1430 41 133 5.5E-149 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 Gene3D G3DSA:1.20.1640.10 14 508 5.5E-149 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82693 136 327 4.19E-21 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82866 859 1092 7.19E-49 T 13-10-2018 Thivi_1898 994aa24b6dd9fda9bdcb589e9594f8e3 1104 SUPERFAMILY SSF82714 184 268 4.84E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_4289 9414126f6d30cc8ad961dd3f843352ef 123 Pfam PF08239 Bacterial SH3 domain 44 117 9.6E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Thivi_4289 9414126f6d30cc8ad961dd3f843352ef 123 Gene3D G3DSA:2.30.30.40 39 118 4.7E-10 T 13-10-2018 Thivi_2670 49faf2874427043834cc0055204a02ae 239 SUPERFAMILY SSF53300 39 198 3.34E-10 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1280 826fa2d51613974f91e7ab1405340636 224 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 217 19.202 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Thivi_1280 826fa2d51613974f91e7ab1405340636 224 Pfam PF04279 Intracellular septation protein A 1 216 1.2E-64 T 13-10-2018 IPR006008 Intracellular septation protein A GO:0016021 Thivi_0554 3045cf8c500dd595a81b65a79df24589 261 Gene3D G3DSA:3.30.70.20 129 193 3.2E-51 T 13-10-2018 Thivi_0554 3045cf8c500dd595a81b65a79df24589 261 Pfam PF13247 4Fe-4S dicluster domain 117 217 1.7E-13 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0554 3045cf8c500dd595a81b65a79df24589 261 Gene3D G3DSA:3.30.70.20 55 258 3.2E-51 T 13-10-2018 Thivi_0554 3045cf8c500dd595a81b65a79df24589 261 SUPERFAMILY SSF54862 53 242 9.21E-49 T 13-10-2018 Thivi_0554 3045cf8c500dd595a81b65a79df24589 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 Gene3D G3DSA:3.40.50.2300 1 131 1.4E-42 T 13-10-2018 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 7.8E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 SUPERFAMILY SSF52172 4 163 7.26E-37 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 Gene3D G3DSA:1.10.10.10 134 198 1.4E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 SMART SM00421 140 197 3.4E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 6.7E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 6.7E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 6.7E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 Pfam PF00072 Response regulator receiver domain 7 116 1.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0871 8b0f35e335bd6978214d942b9be79a01 212 SMART SM00448 5 116 3.9E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SUPERFAMILY SSF47757 234 304 2.88E-10 T 13-10-2018 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Pfam PF08448 PAS fold 882 989 1.7E-7 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SUPERFAMILY SSF55785 876 993 2.09E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Pfam PF13596 PAS domain 766 870 1.3E-20 T 13-10-2018 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Gene3D G3DSA:3.40.50.180 26 223 4.2E-65 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SMART SM00138 235 496 6.0E-86 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Gene3D G3DSA:3.30.450.20 747 870 7.1E-10 T 13-10-2018 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Gene3D G3DSA:3.30.450.20 871 997 3.9E-9 T 13-10-2018 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Pfam PF01739 CheR methyltransferase, SAM binding domain 302 493 1.3E-51 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Pfam PF03705 CheR methyltransferase, all-alpha domain 242 287 5.0E-9 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SUPERFAMILY SSF55785 755 870 3.43E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Gene3D G3DSA:3.40.50.150 300 497 5.9E-60 T 13-10-2018 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 PRINTS PR00996 Glutamate methyltransferase family signature 257 270 8.0E-22 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 PRINTS PR00996 Glutamate methyltransferase family signature 436 450 8.0E-22 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 PRINTS PR00996 Glutamate methyltransferase family signature 370 386 8.0E-22 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 PRINTS PR00996 Glutamate methyltransferase family signature 455 478 8.0E-22 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 PRINTS PR00996 Glutamate methyltransferase family signature 334 354 8.0E-22 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SUPERFAMILY SSF52738 35 217 1.15E-56 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 Pfam PF01339 CheB methylesterase 37 211 5.4E-55 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_2988 2738854d44670b9d843a5e55b50b6c6d 1004 SUPERFAMILY SSF53335 301 495 3.12E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2567 d9d4926a8d5f73c8c65ae5ad7ebda04d 244 Pfam PF13545 Crp-like helix-turn-helix domain 160 226 4.0E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_2567 d9d4926a8d5f73c8c65ae5ad7ebda04d 244 SUPERFAMILY SSF51206 20 139 9.18E-6 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_2567 d9d4926a8d5f73c8c65ae5ad7ebda04d 244 Gene3D G3DSA:1.10.10.10 154 227 2.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2567 d9d4926a8d5f73c8c65ae5ad7ebda04d 244 SUPERFAMILY SSF46785 159 232 2.25E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3452 de649753b5c445a4f05d15617e2198e9 380 Pfam PF00005 ABC transporter 27 168 7.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3452 de649753b5c445a4f05d15617e2198e9 380 SUPERFAMILY SSF52540 20 249 3.51E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3452 de649753b5c445a4f05d15617e2198e9 380 SMART SM00382 33 218 1.9E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3452 de649753b5c445a4f05d15617e2198e9 380 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3452 de649753b5c445a4f05d15617e2198e9 380 Gene3D G3DSA:3.40.50.300 25 260 4.1E-58 T 13-10-2018 Thivi_1293 9511b8b6f13866d1f476527b3e39e0da 132 Gene3D G3DSA:2.60.120.10 1 111 9.6E-15 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_1293 9511b8b6f13866d1f476527b3e39e0da 132 Pfam PF07883 Cupin domain 39 93 3.9E-8 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Thivi_1293 9511b8b6f13866d1f476527b3e39e0da 132 SUPERFAMILY SSF51182 2 114 4.33E-16 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 Gene3D G3DSA:3.40.50.300 1 282 2.9E-132 T 13-10-2018 Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 TIGRFAM TIGR00337 PyrG: CTP synthase 1 534 7.2E-249 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 Gene3D G3DSA:3.40.50.880 285 543 5.3E-102 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 SUPERFAMILY SSF52540 1 268 2.87E-123 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 Pfam PF00117 Glutamine amidotransferase class-I 300 533 3.8E-56 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.567 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 Pfam PF06418 CTP synthase N-terminus 3 265 1.5E-125 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Thivi_3969 c9e6e78fd21007b9215a6df081ecb3fe 547 SUPERFAMILY SSF52317 287 540 3.15E-84 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1450 62de6fd2b6fce0b51b6e8c85483e420e 339 Pfam PF13728 F plasmid transfer operon protein 43 270 9.8E-78 T 13-10-2018 IPR039555 F plasmid transfer operon protein Thivi_1450 62de6fd2b6fce0b51b6e8c85483e420e 339 TIGRFAM TIGR02740 TraF-like: TraF-like protein 31 280 1.1E-80 T 13-10-2018 IPR014111 Type IV conjugative transfer system protein TraF-like Thivi_1450 62de6fd2b6fce0b51b6e8c85483e420e 339 Gene3D G3DSA:3.40.30.10 152 268 2.0E-5 T 13-10-2018 Thivi_1450 62de6fd2b6fce0b51b6e8c85483e420e 339 SUPERFAMILY SSF52833 157 269 4.5E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2244 fe2a1bf4d180fb4ee6c5b86ef96f5ed9 283 Pfam PF06629 MltA-interacting protein MipA 34 264 1.2E-29 T 13-10-2018 IPR010583 MltA-interacting MipA Thivi_0969 7b34295f838d3d343d517f77b40a425a 301 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 34 297 1.4E-73 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Thivi_0969 7b34295f838d3d343d517f77b40a425a 301 Gene3D G3DSA:1.10.3720.10 81 299 6.9E-29 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0969 7b34295f838d3d343d517f77b40a425a 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 296 4.2E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0969 7b34295f838d3d343d517f77b40a425a 301 SUPERFAMILY SSF161098 39 293 2.09E-34 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 SUPERFAMILY SSF46894 118 217 1.08E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-40 T 13-10-2018 Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 Pfam PF00072 Response regulator receiver domain 3 113 7.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 5.1E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 SUPERFAMILY SSF52172 1 118 2.28E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 Gene3D G3DSA:1.10.10.10 124 221 1.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 SMART SM00862 145 216 3.0E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4464 f91e951eb4e48546f77bb64b36b4b133 222 SMART SM00448 1 112 1.6E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0566 eb70589e31e44a72364f4df09abd3b6e 408 Pfam PF06738 Putative threonine/serine exporter 1 241 1.9E-53 T 13-10-2018 IPR010619 Putative threonine/serine exporter Thivi_0566 eb70589e31e44a72364f4df09abd3b6e 408 Pfam PF12821 Threonine/Serine exporter, ThrE 263 389 2.0E-25 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Gene3D G3DSA:3.40.50.300 2 159 2.5E-45 T 13-10-2018 Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Gene3D G3DSA:1.10.3710.10 336 435 6.7E-35 T 13-10-2018 Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Pfam PF16193 AAA C-terminal domain 182 257 1.7E-21 T 13-10-2018 IPR032423 AAA C-terminal domain Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 47 154 5.4E-16 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 SUPERFAMILY SSF52540 5 233 2.85E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 424 5.9E-68 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 SMART SM00382 43 160 7.7E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Gene3D G3DSA:1.10.8.60 160 232 1.2E-18 T 13-10-2018 Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 SUPERFAMILY SSF48019 242 424 3.51E-73 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Thivi_4298 9b980b2c20ee5a591c46020480658fcb 435 Gene3D G3DSA:1.20.272.10 233 335 1.2E-42 T 13-10-2018 Thivi_1186 deffa5ebd07a389b9c1e5f15f49a5a6d 161 SMART SM00100 15 133 2.5E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_1186 deffa5ebd07a389b9c1e5f15f49a5a6d 161 SUPERFAMILY SSF51206 10 143 1.83E-27 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_1186 deffa5ebd07a389b9c1e5f15f49a5a6d 161 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 2.4E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_1186 deffa5ebd07a389b9c1e5f15f49a5a6d 161 Gene3D G3DSA:2.60.120.10 2 153 8.2E-29 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Gene3D G3DSA:1.25.40.10 378 705 3.2E-36 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Pfam PF13432 Tetratricopeptide repeat 149 206 0.0048 T 13-10-2018 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Pfam PF13432 Tetratricopeptide repeat 289 335 1.3E-7 T 13-10-2018 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Pfam PF13432 Tetratricopeptide repeat 500 555 0.017 T 13-10-2018 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Pfam PF13432 Tetratricopeptide repeat 566 628 5.2E-6 T 13-10-2018 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Gene3D G3DSA:1.25.40.10 44 183 4.5E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SUPERFAMILY SSF48452 455 696 1.04E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 144 177 290.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 629 662 78.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 594 628 240.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 212 245 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 178 211 400.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 560 593 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SMART SM00028 493 526 24.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 Gene3D G3DSA:1.25.40.10 184 346 1.5E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3296 e5db1530304403b938dc40bceec1ac0b 712 SUPERFAMILY SSF48452 81 307 1.86E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1758 b57f0bd3a8b888af2b4168485c6cdbf3 869 SUPERFAMILY SSF56059 35 462 2.54E-16 T 13-10-2018 Thivi_1758 b57f0bd3a8b888af2b4168485c6cdbf3 869 Gene3D G3DSA:3.40.50.11290 231 327 6.8E-39 T 13-10-2018 Thivi_1758 b57f0bd3a8b888af2b4168485c6cdbf3 869 Pfam PF14403 Circularly permuted ATP-grasp type 2 92 476 8.2E-147 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1758 b57f0bd3a8b888af2b4168485c6cdbf3 869 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 526 851 2.7E-72 T 13-10-2018 IPR007296 Domain of unknown function DUF403 Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 61 18.897 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 Gene3D G3DSA:3.30.1390.20 3 61 2.0E-23 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 Pfam PF00327 Ribosomal protein L30p/L7e 8 57 4.6E-16 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 2.2E-21 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 PIRSF PIRSF002211 1 63 3.4E-25 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4219 00bf608deb6de8e5de969a62a943fbf4 68 SUPERFAMILY SSF55129 5 61 3.4E-19 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Thivi_4450 1a85ab04618a81384451d0298a34f492 303 SUPERFAMILY SSF53167 63 282 2.67E-74 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Thivi_4450 1a85ab04618a81384451d0298a34f492 303 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 17 278 32.664 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Thivi_4450 1a85ab04618a81384451d0298a34f492 303 Gene3D G3DSA:3.40.50.1580 56 296 2.0E-76 T 13-10-2018 Thivi_4450 1a85ab04618a81384451d0298a34f492 303 Pfam PF01048 Phosphorylase superfamily 65 254 3.4E-35 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Thivi_0142 7f0eed9031609ce42e17bde696d43f93 489 SUPERFAMILY SSF46626 355 489 1.02E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0142 7f0eed9031609ce42e17bde696d43f93 489 Gene3D G3DSA:1.10.760.10 350 486 2.6E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0142 7f0eed9031609ce42e17bde696d43f93 489 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 183 489 1.4E-53 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Thivi_0142 7f0eed9031609ce42e17bde696d43f93 489 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 46 124 2.3E-9 T 13-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 Pfam PF00311 Phosphoenolpyruvate carboxylase 143 934 8.0E-280 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 145 156 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 144 157 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 197 213 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 416 436 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 581 601 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 623 652 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 759 785 7.7E-61 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 Gene3D G3DSA:1.20.1440.90 288 419 6.6E-11 T 13-10-2018 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 5 934 16.93 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 SUPERFAMILY SSF51621 16 934 9.1E-283 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_2806 b0ac5630e9bc71439fb2ec2993d71311 934 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 583 595 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Thivi_1871 1f7e4f3958f126d75372f2b2c42ed365 225 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 26 222 4.3E-58 T 13-10-2018 IPR016476 SH3 domain protein Thivi_1871 1f7e4f3958f126d75372f2b2c42ed365 225 Gene3D G3DSA:2.30.30.40 22 86 1.8E-8 T 13-10-2018 Thivi_1871 1f7e4f3958f126d75372f2b2c42ed365 225 Pfam PF08239 Bacterial SH3 domain 35 80 1.1E-6 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Thivi_1871 1f7e4f3958f126d75372f2b2c42ed365 225 SMART SM00287 22 88 1.6E-5 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type Thivi_2043 adb5eecf2236e0a90cb3cf0e5fbb763f 222 Pfam PF13358 DDE superfamily endonuclease 31 182 4.8E-23 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Thivi_2642 adb5eecf2236e0a90cb3cf0e5fbb763f 222 Pfam PF13358 DDE superfamily endonuclease 31 182 4.8E-23 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Gene3D G3DSA:3.40.50.20 2 130 6.4E-48 T 13-10-2018 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 4.2E-136 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 170.404 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 SUPERFAMILY SSF52440 3 123 3.74E-46 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Gene3D G3DSA:3.30.1490.20 138 197 3.0E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Gene3D G3DSA:3.30.470.20 198 301 4.3E-37 T 13-10-2018 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 SUPERFAMILY SSF56059 124 312 7.07E-58 T 13-10-2018 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 3.4E-46 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Thivi_3308 427bcebc3b391d6a7e177b0d6fc7c95b 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 4.2E-76 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 34 951 19.118 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Gene3D G3DSA:1.20.120.330 293 447 9.2E-55 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 SUPERFAMILY SSF81301 31 294 4.25E-81 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 40 278 4.0E-78 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 559 809 2.2E-79 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 SUPERFAMILY SSF81593 822 948 1.02E-30 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Gene3D G3DSA:1.20.120.330 818 951 1.3E-47 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Pfam PF08335 GlnD PII-uridylyltransferase 832 926 5.2E-13 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Pfam PF08335 GlnD PII-uridylyltransferase 305 444 4.4E-42 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Gene3D G3DSA:1.20.120.1510 456 566 2.8E-26 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 SUPERFAMILY SSF81301 531 820 6.54E-83 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 SUPERFAMILY SSF81593 295 444 1.41E-41 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Gene3D G3DSA:3.30.460.100 46 287 3.6E-77 T 13-10-2018 Thivi_0738 97cfe22fc0e88386528d6fc371b2cc4b 953 Gene3D G3DSA:3.30.460.100 568 817 1.1E-85 T 13-10-2018 Thivi_2744 4278959a914395492536528050eae705 260 SUPERFAMILY SSF55920 4 251 2.62E-94 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Thivi_2744 4278959a914395492536528050eae705 260 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.489 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 Gene3D G3DSA:3.90.230.10 1 258 5.9E-115 T 13-10-2018 Thivi_2744 4278959a914395492536528050eae705 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 1.8E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.8E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.8E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.8E-22 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_2744 4278959a914395492536528050eae705 260 Pfam PF00557 Metallopeptidase family M24 12 241 5.5E-56 T 13-10-2018 IPR000994 Peptidase M24 Thivi_2744 4278959a914395492536528050eae705 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.2E-99 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_4169 b70003a4d999b0b95f074f52d23af7d4 328 Gene3D G3DSA:3.40.1570.10 68 322 2.8E-26 T 13-10-2018 Thivi_4169 b70003a4d999b0b95f074f52d23af7d4 328 SUPERFAMILY SSF144064 27 327 4.22E-30 T 13-10-2018 Thivi_4169 b70003a4d999b0b95f074f52d23af7d4 328 Gene3D G3DSA:3.40.1570.10 27 267 2.8E-26 T 13-10-2018 Thivi_4169 b70003a4d999b0b95f074f52d23af7d4 328 Pfam PF05171 Haemin-degrading HemS.ChuX domain 209 326 8.6E-9 T 13-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 Thivi_1199 db6d94cfa393ed96d44b5955cf47e04a 160 SUPERFAMILY SSF52833 4 154 1.58E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1199 db6d94cfa393ed96d44b5955cf47e04a 160 Pfam PF00578 AhpC/TSA family 5 133 1.3E-32 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_1199 db6d94cfa393ed96d44b5955cf47e04a 160 PIRSF PIRSF000239 1 158 1.5E-23 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_1199 db6d94cfa393ed96d44b5955cf47e04a 160 Gene3D G3DSA:3.40.30.10 1 153 4.6E-46 T 13-10-2018 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 13-10-2018 IPR025505 FHIPEP conserved site Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 Gene3D G3DSA:3.40.30.60 360 502 1.4E-49 T 13-10-2018 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 Gene3D G3DSA:1.10.490.80 595 692 3.0E-10 T 13-10-2018 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PIRSF PIRSF005419 10 697 2.0E-243 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 Gene3D G3DSA:1.10.8.540 503 591 1.9E-24 T 13-10-2018 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 5.3E-55 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 692 3.1E-259 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Thivi_0372 b80d30b4950c64082418c22ab3b24f5c 702 Pfam PF00771 FHIPEP family 26 683 6.3E-261 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Thivi_2015 484be360ebd33e961f9a94d9f2d24339 498 Pfam PF01593 Flavin containing amine oxidoreductase 13 491 7.7E-25 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_2015 484be360ebd33e961f9a94d9f2d24339 498 SUPERFAMILY SSF51905 1 494 5.06E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2015 484be360ebd33e961f9a94d9f2d24339 498 Gene3D G3DSA:3.50.50.60 204 319 1.3E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2015 484be360ebd33e961f9a94d9f2d24339 498 Gene3D G3DSA:3.50.50.60 3 92 1.0E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2015 484be360ebd33e961f9a94d9f2d24339 498 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 6 495 2.4E-84 T 13-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 PRINTS PR00207 Flagellin signature 37 54 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 PRINTS PR00207 Flagellin signature 76 95 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 PRINTS PR00207 Flagellin signature 111 134 9.4E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:2.30.220.10 193 299 7.1E-81 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 SUPERFAMILY SSF64518 434 716 1.1E-29 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Pfam PF00700 Bacterial flagellin C-terminal helical region 632 715 1.6E-21 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:1.20.58.1830 5 33 7.1E-81 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 4.6E-45 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:1.20.1330.10 615 666 1.5E-14 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:3.30.70.2120 516 614 1.5E-14 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:1.20.1330.10 45 177 7.1E-81 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:1.10.8.410 667 716 8.8E-20 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 SUPERFAMILY SSF64518 1 412 2.22E-62 T 13-10-2018 Thivi_0876 95202cabb6571e6ebc6e3ea652d1184d 716 Gene3D G3DSA:2.170.280.10 178 406 7.1E-81 T 13-10-2018 Thivi_3448 d6b5ad764d45bfa4d2bf535b3713bb31 348 Gene3D G3DSA:1.20.58.2180 166 335 4.5E-53 T 13-10-2018 Thivi_3448 d6b5ad764d45bfa4d2bf535b3713bb31 348 Gene3D G3DSA:3.40.50.1980 190 293 4.5E-53 T 13-10-2018 Thivi_3448 d6b5ad764d45bfa4d2bf535b3713bb31 348 Pfam PF01497 Periplasmic binding protein 148 283 5.8E-13 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain Thivi_3448 d6b5ad764d45bfa4d2bf535b3713bb31 348 SUPERFAMILY SSF53807 32 344 2.32E-43 T 13-10-2018 Thivi_3448 d6b5ad764d45bfa4d2bf535b3713bb31 348 Gene3D G3DSA:3.40.50.1980 26 160 6.8E-32 T 13-10-2018 Thivi_1177 c8fea36848c251420368da0187e18bd6 490 PIRSF PIRSF005522 10 490 1.8E-213 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Thivi_1177 c8fea36848c251420368da0187e18bd6 490 Gene3D G3DSA:3.30.1490.270 363 423 2.6E-25 T 13-10-2018 Thivi_1177 c8fea36848c251420368da0187e18bd6 490 SUPERFAMILY SSF56059 34 481 3.65E-61 T 13-10-2018 Thivi_1177 c8fea36848c251420368da0187e18bd6 490 Pfam PF14403 Circularly permuted ATP-grasp type 2 91 466 2.8E-161 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1177 c8fea36848c251420368da0187e18bd6 490 Gene3D G3DSA:3.40.50.11290 229 326 2.9E-39 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 SUPERFAMILY SSF47831 307 423 7.19E-27 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 SUPERFAMILY SSF51261 4 148 1.6E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR00107 Phosphocarrier protein signature 219 236 1.7E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR00107 Phosphocarrier protein signature 179 195 1.7E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR00107 Phosphocarrier protein signature 204 219 1.7E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Gene3D G3DSA:3.30.1340.10 169 249 1.2E-22 T 13-10-2018 IPR035895 HPr-like superfamily Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 SUPERFAMILY SSF52009 406 520 1.03E-29 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 286 839 5.0E-168 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 721 736 3.4E-20 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 774 786 3.4E-20 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 572 591 3.4E-20 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 738 753 3.4E-20 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Pfam PF05524 PEP-utilising enzyme, N-terminal 287 406 1.7E-23 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 SUPERFAMILY SSF51621 537 823 4.45E-99 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Gene3D G3DSA:1.10.274.10 304 426 7.8E-68 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Gene3D G3DSA:3.50.30.10 287 512 7.8E-68 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Pfam PF00381 PTS HPr component phosphorylation site 172 244 9.0E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 538 813 1.1E-104 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 68 80 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Gene3D G3DSA:2.70.70.10 2 151 2.5E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 179 186 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 5 128 2.3E-40 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Gene3D G3DSA:3.20.20.60 513 842 3.7E-114 T 13-10-2018 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 7 126 1.1E-35 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 Pfam PF00391 PEP-utilising enzyme, mobile domain 430 504 8.0E-21 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 SUPERFAMILY SSF55594 171 253 1.57E-21 T 13-10-2018 IPR035895 HPr-like superfamily Thivi_0264 7719dc6ae17e7b22b0d0e0cb24208525 843 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 170 244 7.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 7.0E-29 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 SUPERFAMILY SSF117130 1 54 1.44E-20 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 Pfam PF02599 Global regulator protein family 1 52 1.8E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-19 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 65 17.474 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Thivi_0742 eb2ad3de59e00fbe0695e7deb77b9486 72 Gene3D G3DSA:3.30.70.1680 1 59 1.6E-29 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 171 324 5.4E-19 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 13 353 4.7E-128 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 SUPERFAMILY SSF55347 160 321 1.44E-47 T 13-10-2018 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 13 347 43.505 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 SUPERFAMILY SSF51735 13 187 1.72E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3082 51a435e0b20950dddef983985b7158f6 353 Gene3D G3DSA:3.30.360.10 158 321 4.3E-126 T 13-10-2018 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 Gene3D G3DSA:3.40.50.720 14 339 4.3E-126 T 13-10-2018 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 SMART SM00859 14 152 2.8E-62 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 14 151 5.3E-36 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Thivi_3082 51a435e0b20950dddef983985b7158f6 353 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 155 171 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Thivi_3941 93312e8f2feb3c4d786c9b0651475dfa 114 Pfam PF07883 Cupin domain 51 105 1.7E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Thivi_3941 93312e8f2feb3c4d786c9b0651475dfa 114 SUPERFAMILY SSF51182 48 111 2.04E-16 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_3941 93312e8f2feb3c4d786c9b0651475dfa 114 Gene3D G3DSA:2.60.120.10 21 109 2.3E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_2476 c5b1387214a2362e10613bba79abb1d8 381 SUPERFAMILY SSF52540 40 364 2.01E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2476 c5b1387214a2362e10613bba79abb1d8 381 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 224 358 2.0E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_2476 c5b1387214a2362e10613bba79abb1d8 381 Gene3D G3DSA:3.40.50.300 249 365 8.7E-13 T 13-10-2018 Thivi_2428 509b36ae5f7a49c2036880a6f8c7d159 229 SMART SM00986 39 200 1.8E-16 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_2428 509b36ae5f7a49c2036880a6f8c7d159 229 Gene3D G3DSA:3.40.470.10 13 206 5.4E-37 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_2428 509b36ae5f7a49c2036880a6f8c7d159 229 SUPERFAMILY SSF52141 16 188 2.42E-30 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_2428 509b36ae5f7a49c2036880a6f8c7d159 229 SMART SM00987 39 200 1.8E-16 T 13-10-2018 Thivi_2428 509b36ae5f7a49c2036880a6f8c7d159 229 Pfam PF03167 Uracil DNA glycosylase superfamily 46 197 1.8E-25 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 SUPERFAMILY SSF51161 2 256 4.42E-80 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 PIRSF PIRSF000456 1 256 1.8E-103 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.781 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 131 5.8E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 46 1.3E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Gene3D G3DSA:2.160.10.10 1 188 3.1E-54 T 13-10-2018 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 1.5E-102 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Gene3D G3DSA:1.20.1180.10 191 256 6.5E-22 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Thivi_2757 13effa8c5a43f5d65a353ce15c37249e 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 175 254 1.2E-25 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Thivi_3399 36364bb1b7173054bf361cb3722a87b7 233 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 13 219 26.946 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_3399 36364bb1b7173054bf361cb3722a87b7 233 PIRSF PIRSF006102 12 228 2.4E-75 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3399 36364bb1b7173054bf361cb3722a87b7 233 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 16 217 1.1E-79 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_3399 36364bb1b7173054bf361cb3722a87b7 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 16 208 9.7E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_0126 7535f399024fa161ee9f3dbf8d196ca4 216 Gene3D G3DSA:3.40.50.150 61 198 3.8E-13 T 13-10-2018 Thivi_0126 7535f399024fa161ee9f3dbf8d196ca4 216 SUPERFAMILY SSF53335 62 189 2.0E-9 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0126 7535f399024fa161ee9f3dbf8d196ca4 216 Pfam PF13578 Methyltransferase domain 64 171 2.1E-13 T 13-10-2018 Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 Gene3D G3DSA:3.40.50.720 12 242 3.0E-42 T 13-10-2018 Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 2.6E-29 T 13-10-2018 Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 SUPERFAMILY SSF51735 14 240 3.81E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3267 2ea7df3ea2968351d4e363911fdffe9e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.7E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_4436 8021e3cf0fa956eeaf017f2605fa2249 211 SMART SM01252 15 125 4.8E-23 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding Thivi_4436 8021e3cf0fa956eeaf017f2605fa2249 211 Pfam PF04383 KilA-N domain 16 122 4.2E-18 T 13-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Gene3D G3DSA:3.30.470.20 102 311 1.8E-69 T 13-10-2018 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 SUPERFAMILY SSF56059 113 311 8.52E-55 T 13-10-2018 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Pfam PF07478 D-ala D-ala ligase C-terminus 143 311 9.2E-51 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Gene3D G3DSA:3.30.1490.20 128 192 1.8E-69 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 SUPERFAMILY SSF52440 21 113 4.99E-29 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 80 91 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 PIRSF PIRSF039102 18 63 4.3E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 PIRSF PIRSF039102 60 318 4.6E-78 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 20 315 33.861 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 21 314 4.3E-96 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Gene3D G3DSA:3.40.50.20 8 101 5.1E-30 T 13-10-2018 Thivi_2316 36ee201fdeb2a3401c48097f94fb4e5e 318 Pfam PF01820 D-ala D-ala ligase N-terminus 21 103 1.6E-16 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_2805 a0fb73bf09e917e6e75e48ad8ed9b73f 308 Gene3D G3DSA:3.40.50.300 67 200 1.1E-5 T 13-10-2018 Thivi_2805 a0fb73bf09e917e6e75e48ad8ed9b73f 308 SUPERFAMILY SSF52540 67 228 6.89E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0751 ec6b88ec7898a2b3698dfa2d1e984e6b 169 Gene3D G3DSA:3.30.310.70 36 163 1.6E-13 T 13-10-2018 IPR035923 TT1751-like domain superfamily Thivi_0751 ec6b88ec7898a2b3698dfa2d1e984e6b 169 SUPERFAMILY SSF103247 45 162 1.09E-24 T 13-10-2018 IPR035923 TT1751-like domain superfamily Thivi_0751 ec6b88ec7898a2b3698dfa2d1e984e6b 169 Pfam PF03625 Domain of unknown function DUF302 73 132 1.6E-11 T 13-10-2018 IPR005180 Domain of unknown function DUF302 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 SUPERFAMILY SSF56059 107 301 1.94E-52 T 13-10-2018 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 367 6.5E-123 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 10 362 40.194 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 SUPERFAMILY SSF51246 306 379 3.45E-17 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 Pfam PF02222 ATP-grasp domain 116 280 7.9E-44 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 Gene3D G3DSA:3.30.1490.20 112 178 2.3E-14 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 Gene3D G3DSA:3.40.50.20 9 111 2.5E-40 T 13-10-2018 Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 SUPERFAMILY SSF52440 9 104 3.17E-30 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_3320 c378bbfecda6832b587276a5aa108e45 384 Gene3D G3DSA:3.30.470.20 180 375 2.9E-72 T 13-10-2018 Thivi_2603 13fef27f614155057145c19f09992cab 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.1E-268 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 SMART SM01228 546 617 4.8E-38 T 13-10-2018 Thivi_2603 13fef27f614155057145c19f09992cab 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 SUPERFAMILY SSF51905 6 261 1.36E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2603 13fef27f614155057145c19f09992cab 624 Pfam PF13932 GidA associated domain 402 616 1.2E-72 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 Pfam PF01134 Glucose inhibited division protein A 8 399 1.6E-162 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.372 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Thivi_2603 13fef27f614155057145c19f09992cab 624 Gene3D G3DSA:3.50.50.60 300 458 2.9E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2603 13fef27f614155057145c19f09992cab 624 Gene3D G3DSA:3.50.50.60 1 221 2.2E-88 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2603 13fef27f614155057145c19f09992cab 624 Gene3D G3DSA:1.10.150.570 569 621 1.4E-21 T 13-10-2018 Thivi_2603 13fef27f614155057145c19f09992cab 624 Gene3D G3DSA:1.10.10.1800 459 550 9.4E-22 T 13-10-2018 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 Gene3D G3DSA:3.30.450.20 33 187 9.6E-56 T 13-10-2018 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 SUPERFAMILY SSF58104 247 541 1.7E-69 T 13-10-2018 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 507 2.7E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 Gene3D G3DSA:1.10.287.950 222 541 2.8E-68 T 13-10-2018 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 Pfam PF17200 Single Cache domain 2 39 185 6.3E-45 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 SMART SM00283 279 540 1.3E-71 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 1.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.1E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_2100 72ba19c7c96cab13a28572b22d18024b 541 SMART SM01049 35 129 9.6E-37 T 13-10-2018 IPR033480 Single Cache domain 2 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 SUPERFAMILY SSF55874 361 503 9.17E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 484 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 503 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 2.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 Gene3D G3DSA:3.30.565.10 361 507 4.9E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 SUPERFAMILY SSF47384 284 356 3.34E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 Gene3D G3DSA:1.10.287.130 245 353 2.7E-17 T 13-10-2018 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 SMART SM00387 397 506 3.6E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 Pfam PF00672 HAMP domain 249 295 3.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 505 1.7E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 SMART SM00388 300 358 8.0E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 SMART SM00304 247 299 6.3E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_3859 a3fd13605dc601c1421aded20961fd94 507 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 347 5.1E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2961 24beefc0d700a28291a626f81dbec3f8 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 108 1.4E-24 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 SUPERFAMILY SSF55874 173 340 1.31E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 Gene3D G3DSA:1.10.1240.30 3 92 4.0E-6 T 13-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 SUPERFAMILY SSF47384 101 178 2.16E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 Pfam PF00512 His Kinase A (phospho-acceptor) domain 118 179 1.1E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 6.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 6.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 6.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 6.3E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 SMART SM00387 223 337 2.2E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 Gene3D G3DSA:3.30.565.10 185 341 1.1E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 225 335 9.6E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 Gene3D G3DSA:1.10.287.130 108 180 2.1E-18 T 13-10-2018 Thivi_0336 9c65e92fc1b063be90031acd5899a946 354 SMART SM00388 116 182 4.4E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 SUPERFAMILY SSF52374 5 663 1.15E-141 T 13-10-2018 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Pfam PF08264 Anticodon-binding domain of tRNA 694 814 8.6E-18 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Gene3D G3DSA:1.10.730.10 8 784 0.0 T 13-10-2018 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.8E-72 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Gene3D G3DSA:3.10.330.110 561 623 0.0 T 13-10-2018 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Pfam PF09334 tRNA synthetases class I (M) 39 171 1.4E-19 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 SUPERFAMILY SSF50677 226 415 3.45E-54 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 613 651 1.5E-5 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 566 6.1E-8 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 851 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 SUPERFAMILY SSF47323 657 851 2.8E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Gene3D G3DSA:3.40.50.620 33 560 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 551 561 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 518 540 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 PRINTS PR00985 Leucyl-tRNA synthetase signature 480 498 1.1E-51 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Gene3D G3DSA:3.10.20.590 793 852 7.3E-20 T 13-10-2018 Thivi_0986 97de386872f6f3642d5d91c04995c0c0 852 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 852 22.771 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 4 487 1.8E-173 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 Gene3D G3DSA:3.30.360.10 177 474 6.3E-168 T 13-10-2018 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 Gene3D G3DSA:3.40.50.720 7 435 6.3E-168 T 13-10-2018 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PIRSF PIRSF000110 1 489 1.1E-173 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 SUPERFAMILY SSF51735 2 190 8.66E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 486 3.6E-111 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 SUPERFAMILY SSF55347 182 486 4.58E-110 T 13-10-2018 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 487 77.149 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 143 156 2.2E-45 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 219 236 2.2E-45 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 328 354 2.2E-45 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 167 195 2.2E-45 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 253 2.2E-45 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_0103 b9b55a4863a62e5d5f062b630b0cc7ca 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 187 2.2E-53 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Thivi_4341 901240fb6b7fa0b138576d733af41f7a 92 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 85 1.8E-21 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Thivi_4341 901240fb6b7fa0b138576d733af41f7a 92 Pfam PF04221 RelB antitoxin 4 71 3.2E-21 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ Thivi_4341 901240fb6b7fa0b138576d733af41f7a 92 PIRSF PIRSF003108 1 90 1.9E-30 T 13-10-2018 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 Thivi_4341 901240fb6b7fa0b138576d733af41f7a 92 Gene3D G3DSA:1.10.1220.10 2 51 1.1E-14 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Thivi_4256 b049d74b4e811b9c8afedfc67bc41f0f 329 Gene3D G3DSA:3.40.50.300 56 316 1.3E-56 T 13-10-2018 Thivi_4256 b049d74b4e811b9c8afedfc67bc41f0f 329 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 81 289 3.9E-80 T 13-10-2018 Thivi_4256 b049d74b4e811b9c8afedfc67bc41f0f 329 Pfam PF13614 AAA domain 120 264 1.2E-10 T 13-10-2018 IPR025669 AAA domain Thivi_4256 b049d74b4e811b9c8afedfc67bc41f0f 329 SUPERFAMILY SSF52540 118 295 1.21E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1046 3841b72ccc2b8b6f4c799b2d85efdf00 249 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 83 220 1.5E-69 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Thivi_1046 3841b72ccc2b8b6f4c799b2d85efdf00 249 Gene3D G3DSA:1.10.760.10 81 243 5.3E-71 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1046 3841b72ccc2b8b6f4c799b2d85efdf00 249 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 81 216 5.4E-67 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Thivi_1046 3841b72ccc2b8b6f4c799b2d85efdf00 249 SUPERFAMILY SSF46626 27 236 6.06E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 Pfam PF09190 DALR domain 340 401 1.3E-23 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 SUPERFAMILY SSF47323 316 459 1.57E-40 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 SUPERFAMILY SSF52374 2 313 2.56E-103 T 13-10-2018 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 Gene3D G3DSA:1.20.120.640 306 460 2.1E-50 T 13-10-2018 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.1E-136 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 8.5E-31 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 8.5E-31 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 8.5E-31 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 8.5E-31 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 Gene3D G3DSA:3.40.50.620 1 305 7.9E-138 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.859 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 SMART SM00840 340 401 9.3E-28 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Thivi_2079 b32f3660d5f1f5d9601825beff55354b 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.4E-177 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 Gene3D G3DSA:3.40.50.300 2 222 2.7E-71 T 13-10-2018 Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 Pfam PF00271 Helicase conserved C-terminal domain 255 351 1.5E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 Gene3D G3DSA:3.40.50.300 227 409 9.8E-45 T 13-10-2018 Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 SMART SM00487 28 234 3.6E-51 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 SUPERFAMILY SSF52540 84 362 3.45E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.992 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 SMART SM00490 270 351 3.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2506 ea061a974a1427c549f8770ac0a88656 576 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.0E-45 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.2090.10 764 854 3.8E-229 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Pfam PF00873 AcrB/AcrD/AcrF family 31 1075 4.2E-151 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.70.1440 714 920 3.8E-229 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.2090.10 199 290 3.8E-229 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82693 57 147 7.67E-17 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82714 765 850 2.35E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82714 204 285 3.27E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82866 856 1081 9.81E-42 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 55 73 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 27 51 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 364 387 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 418 442 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 PRINTS PR00702 Acriflavin resistance protein family signature 497 520 3.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82693 160 355 8.11E-10 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.70.1430 57 862 3.8E-229 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.70.1430 605 713 3.8E-229 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82693 601 715 7.59E-12 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:3.30.70.1320 153 358 3.8E-229 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 SUPERFAMILY SSF82866 323 522 6.02E-36 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:1.20.1640.10 33 549 3.8E-229 T 13-10-2018 Thivi_3097 19f7ec5f63165603bee67ce107078fd4 1090 Gene3D G3DSA:1.20.1640.10 550 1075 3.8E-229 T 13-10-2018 Thivi_0430 4f2ca82a59c516d348c67a7416a43424 105 SMART SM00530 16 72 2.3E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_0430 4f2ca82a59c516d348c67a7416a43424 105 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 85 2.0E-32 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Thivi_0430 4f2ca82a59c516d348c67a7416a43424 105 SUPERFAMILY SSF47413 12 94 9.57E-28 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_0430 4f2ca82a59c516d348c67a7416a43424 105 Pfam PF01381 Helix-turn-helix 22 71 2.5E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_0430 4f2ca82a59c516d348c67a7416a43424 105 Gene3D G3DSA:1.10.260.40 5 105 1.1E-34 T 13-10-2018 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 221 24.791 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 PRINTS PR01008 Flagellar L-ring protein signature 137 152 3.6E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 PRINTS PR01008 Flagellar L-ring protein signature 163 179 3.6E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 PRINTS PR01008 Flagellar L-ring protein signature 184 198 3.6E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 PRINTS PR01008 Flagellar L-ring protein signature 62 74 3.6E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 PRINTS PR01008 Flagellar L-ring protein signature 200 214 3.6E-21 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_0401 306fbf188edfa97fb30ce193d183bdf9 224 Pfam PF02107 Flagellar L-ring protein 41 223 5.6E-61 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Thivi_2951 73caf9f8f2c687f6e0f4e9e8015c6538 222 Pfam PF13358 DDE superfamily endonuclease 31 182 4.8E-23 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 SUPERFAMILY SSF110942 519 632 7.59E-35 T 13-10-2018 IPR037196 HSP90, C-terminal domain Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Gene3D G3DSA:3.30.230.80 238 409 6.6E-68 T 13-10-2018 Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 SMART SM00387 30 187 3.4E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 SUPERFAMILY SSF54211 239 493 7.59E-97 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PIRSF PIRSF002583 3 638 8.9E-211 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 SUPERFAMILY SSF55874 8 216 1.96E-60 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 6.6E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Gene3D G3DSA:3.30.565.10 4 217 6.1E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Gene3D G3DSA:3.40.50.11260 410 501 6.5E-33 T 13-10-2018 Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 632 32.221 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 123 145 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 78 95 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 96 113 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 8 28 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 175 192 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 29 51 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 PRINTS PR00775 90kDa heat shock protein signature 193 211 2.3E-58 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Gene3D G3DSA:1.20.120.790 502 633 2.5E-44 T 13-10-2018 IPR037196 HSP90, C-terminal domain Thivi_0619 fd644c44dc0ba7f3822d58ba0cf06a7f 639 Pfam PF00183 Hsp90 protein 225 635 1.4E-129 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 PIRSF PIRSF018427 8 189 1.5E-47 T 13-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 SUPERFAMILY SSF55811 24 188 1.15E-42 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 24 190 27.883 T 13-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 Pfam PF00293 NUDIX domain 50 180 1.1E-21 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 26 182 1.9E-34 T 13-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 Thivi_1991 6205b9711d99e83bd08bb34a891c6ffc 190 Gene3D G3DSA:3.90.79.10 2 190 1.6E-46 T 13-10-2018 Thivi_1431 e01e881f13c45af97a0b743f6c81e7ff 38 SUPERFAMILY SSF140736 6 38 2.75E-10 T 13-10-2018 IPR036287 Rv1873-like superfamily Thivi_1431 e01e881f13c45af97a0b743f6c81e7ff 38 Pfam PF08837 Protein of unknown function (DUF1810) 8 38 3.0E-10 T 13-10-2018 IPR014937 Protein of unknown function DUF1810 Thivi_1431 e01e881f13c45af97a0b743f6c81e7ff 38 Gene3D G3DSA:1.25.40.380 1 38 2.3E-12 T 13-10-2018 IPR036287 Rv1873-like superfamily Thivi_1811 8d3d194a1699af7c5621cb0bca736e87 171 SUPERFAMILY SSF111384 23 167 1.83E-28 T 13-10-2018 Thivi_1811 8d3d194a1699af7c5621cb0bca736e87 171 Gene3D G3DSA:3.30.910.20 13 171 2.4E-30 T 13-10-2018 IPR024930 Skp domain superfamily Thivi_1811 8d3d194a1699af7c5621cb0bca736e87 171 SMART SM00935 11 167 5.2E-39 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Thivi_1811 8d3d194a1699af7c5621cb0bca736e87 171 Pfam PF03938 Outer membrane protein (OmpH-like) 8 166 9.5E-30 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Thivi_1056 715bafebbd9a1d69b640133b023112e5 210 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 55 161 9.3E-21 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1056 715bafebbd9a1d69b640133b023112e5 210 Gene3D G3DSA:3.40.50.12280 13 187 1.5E-56 T 13-10-2018 Thivi_1056 715bafebbd9a1d69b640133b023112e5 210 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 167 7.2E-51 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1056 715bafebbd9a1d69b640133b023112e5 210 SUPERFAMILY SSF56770 29 178 7.06E-54 T 13-10-2018 Thivi_4071 bd115255f0b00933df0e5ec9b6d542c5 182 Gene3D G3DSA:3.30.420.10 1 180 6.4E-70 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_4071 bd115255f0b00933df0e5ec9b6d542c5 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.509 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 Thivi_4071 bd115255f0b00933df0e5ec9b6d542c5 182 SUPERFAMILY SSF53098 3 179 8.76E-45 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4071 bd115255f0b00933df0e5ec9b6d542c5 182 SMART SM00479 7 180 3.3E-20 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_4071 bd115255f0b00933df0e5ec9b6d542c5 182 Pfam PF00929 Exonuclease 9 170 1.0E-29 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_1958 113dcc397d463e668ca55f37ede0cccf 452 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 271 432 5.5E-32 T 13-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Thivi_1958 113dcc397d463e668ca55f37ede0cccf 452 Gene3D G3DSA:3.40.50.10840 9 249 2.2E-22 T 13-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Thivi_1958 113dcc397d463e668ca55f37ede0cccf 452 Gene3D G3DSA:3.40.980.20 259 440 5.7E-11 T 13-10-2018 Thivi_1958 113dcc397d463e668ca55f37ede0cccf 452 SUPERFAMILY SSF142764 9 439 2.48E-82 T 13-10-2018 Thivi_1958 113dcc397d463e668ca55f37ede0cccf 452 Pfam PF07005 Putative sugar-binding N-terminal domain 9 246 4.5E-59 T 13-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Thivi_1391 37d20b1009b5e49899b1e83dfa293ef4 474 PIRSF PIRSF006060 1 468 2.0E-43 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Thivi_1391 37d20b1009b5e49899b1e83dfa293ef4 474 Pfam PF13520 Amino acid permease 7 414 7.2E-63 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Thivi_1391 37d20b1009b5e49899b1e83dfa293ef4 474 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 5 474 7.4E-155 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 Thivi_1391 37d20b1009b5e49899b1e83dfa293ef4 474 Gene3D G3DSA:1.20.1740.10 2 471 1.8E-50 T 13-10-2018 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 Gene3D G3DSA:2.40.10.120 43 266 7.4E-84 T 13-10-2018 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 Pfam PF13180 PDZ domain 275 359 1.1E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 SUPERFAMILY SSF50156 230 355 5.26E-24 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 SUPERFAMILY SSF50156 395 455 1.71E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 Gene3D G3DSA:2.30.42.10 378 458 2.3E-13 T 13-10-2018 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 169 193 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 204 221 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 108 120 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 129 149 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 312 324 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 PRINTS PR00834 HtrA/DegQ protease family signature 226 243 2.3E-53 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 SMART SM00228 357 452 7.2E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 SMART SM00228 272 354 4.5E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 Gene3D G3DSA:2.30.42.10 267 367 2.0E-25 T 13-10-2018 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 SUPERFAMILY SSF50494 43 263 2.77E-66 T 13-10-2018 IPR009003 Peptidase S1, PA clan Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 Pfam PF13365 Trypsin-like peptidase domain 98 233 7.6E-33 T 13-10-2018 Thivi_1011 8435784e6ba6a19f583724542e6a6c38 460 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 456 1.5E-136 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Thivi_1303 c03ec8b8d247d73299bf0939353ea913 576 Pfam PF00374 Nickel-dependent hydrogenase 39 561 1.8E-232 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_1303 c03ec8b8d247d73299bf0939353ea913 576 SUPERFAMILY SSF56762 1 561 2.09E-174 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1303 c03ec8b8d247d73299bf0939353ea913 576 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 552 561 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_1303 c03ec8b8d247d73299bf0939353ea913 576 Gene3D G3DSA:1.10.645.10 1 561 1.1E-257 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1303 c03ec8b8d247d73299bf0939353ea913 576 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_4073 7cf86c51bb8e3e794e8e5fad7f4a8d41 391 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 324 5.6E-48 T 13-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 Thivi_4073 7cf86c51bb8e3e794e8e5fad7f4a8d41 391 Gene3D G3DSA:3.40.50.12710 11 391 2.0E-115 T 13-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 Thivi_4073 7cf86c51bb8e3e794e8e5fad7f4a8d41 391 SUPERFAMILY SSF53335 25 383 1.18E-89 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 Gene3D G3DSA:1.10.8.80 252 340 5.9E-29 T 13-10-2018 Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 SUPERFAMILY SSF52540 4 331 8.54E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 Gene3D G3DSA:3.40.50.300 3 207 1.2E-62 T 13-10-2018 Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 Pfam PF01078 Magnesium chelatase, subunit ChlI 117 188 1.5E-8 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 TIGRFAM TIGR02030 BchI-ChlI: magnesium chelatase ATPase subunit I 5 340 4.9E-153 T 13-10-2018 IPR011775 Magnesium chelatase, ATPase subunit I GO:0005524|GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_1846 3d100dde45e9677ac5e19896dd5fca16 342 SMART SM00382 28 210 8.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3046 10a6979e5d3c1a419a6167c1551ae0a2 463 SUPERFAMILY SSF161098 200 450 6.8E-31 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3046 10a6979e5d3c1a419a6167c1551ae0a2 463 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 181 6.4E-33 T 13-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 Thivi_3046 10a6979e5d3c1a419a6167c1551ae0a2 463 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 166 458 7.8E-87 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Thivi_3046 10a6979e5d3c1a419a6167c1551ae0a2 463 Gene3D G3DSA:1.10.3720.10 230 461 8.6E-35 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3046 10a6979e5d3c1a419a6167c1551ae0a2 463 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 250 458 1.5E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 SUPERFAMILY SSF81891 173 409 4.84E-49 T 13-10-2018 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 202 263 6.7E-19 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Gene3D G3DSA:3.30.460.10 14 172 1.2E-58 T 13-10-2018 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 SUPERFAMILY SSF81301 20 171 4.69E-39 T 13-10-2018 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Pfam PF01743 Poly A polymerase head domain 48 175 1.4E-35 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 3 430 37.93 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 16 432 6.9E-156 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Pfam PF12626 Polymerase A arginine-rich C-terminus 318 430 4.0E-42 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Thivi_0096 d4cbe9a44bb1aea0f2c5fd9a123e9a82 442 Gene3D G3DSA:1.10.3090.10 174 419 5.8E-92 T 13-10-2018 Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 Gene3D G3DSA:1.10.10.10 102 165 1.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 Pfam PF09397 Ftsk gamma domain 100 160 3.6E-27 T 13-10-2018 IPR018541 FtsK gamma domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 PRINTS PR00625 DnaJ domain signature 41 61 4.4E-10 T 13-10-2018 IPR001623 DnaJ domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 PRINTS PR00625 DnaJ domain signature 5 23 4.4E-10 T 13-10-2018 IPR001623 DnaJ domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 PRINTS PR00625 DnaJ domain signature 23 38 4.4E-10 T 13-10-2018 IPR001623 DnaJ domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 SUPERFAMILY SSF46565 2 72 9.55E-19 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 Gene3D G3DSA:1.10.287.110 1 85 3.7E-20 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 SMART SM00271 2 61 2.1E-17 T 13-10-2018 IPR001623 DnaJ domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 Pfam PF00226 DnaJ domain 3 66 3.7E-17 T 13-10-2018 IPR001623 DnaJ domain Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 SUPERFAMILY SSF46785 100 161 4.22E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4301 1018c065f0c58ee946b66c832f35c291 311 SMART SM00843 98 163 3.2E-35 T 13-10-2018 IPR018541 FtsK gamma domain Thivi_0422 f6f5a003e699e975f08116fe33454638 200 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 34 84 1.8E-6 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Thivi_0422 f6f5a003e699e975f08116fe33454638 200 Gene3D G3DSA:1.10.150.130 31 89 8.8E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_0935 89428e8524516e538b60afd73086c94b 144 Gene3D G3DSA:3.30.530.20 3 144 4.7E-35 T 13-10-2018 IPR023393 START-like domain superfamily Thivi_0935 89428e8524516e538b60afd73086c94b 144 SUPERFAMILY SSF55961 4 143 2.65E-30 T 13-10-2018 Thivi_0935 89428e8524516e538b60afd73086c94b 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 3.4E-26 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Thivi_0395 0307108aa53bb46f08765a1b79070fec 135 PIRSF PIRSF002889 1 135 3.2E-36 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Thivi_0395 0307108aa53bb46f08765a1b79070fec 135 Pfam PF00460 Flagella basal body rod protein 19 39 6.8E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Thivi_0395 0307108aa53bb46f08765a1b79070fec 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 133 8.0E-29 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Thivi_0219 bae52272ddf7b5294045b8f2b4783315 454 SUPERFAMILY SSF52540 86 348 4.3E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0219 bae52272ddf7b5294045b8f2b4783315 454 Gene3D G3DSA:3.40.50.12240 27 447 1.3E-105 T 13-10-2018 Thivi_0219 bae52272ddf7b5294045b8f2b4783315 454 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 42 82 8.6E-5 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0219 bae52272ddf7b5294045b8f2b4783315 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 142 331 2.9E-42 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_4554 cad4d57d9c665d2fd74f5a64a28e5dbb 108 SUPERFAMILY SSF50118 1 106 2.13E-28 T 13-10-2018 Thivi_4554 cad4d57d9c665d2fd74f5a64a28e5dbb 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 3.6E-23 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_4554 cad4d57d9c665d2fd74f5a64a28e5dbb 108 Gene3D G3DSA:2.30.30.110 1 108 8.6E-29 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_4554 cad4d57d9c665d2fd74f5a64a28e5dbb 108 PIRSF PIRSF033490 1 106 2.5E-28 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 Gene3D G3DSA:3.40.47.10 1 318 2.5E-134 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 229 318 7.3E-39 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 SUPERFAMILY SSF53901 2 318 2.81E-73 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 318 72.061 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 6.3E-35 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Thivi_0016 2e33c2406d7bcae47b11c0dc2b5fe0fd 318 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 318 1.1E-132 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Gene3D G3DSA:1.10.10.60 376 441 9.9E-17 T 13-10-2018 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 2.5E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 2.5E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 SUPERFAMILY SSF46689 351 439 1.08E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 SMART SM00448 1 112 4.4E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Gene3D G3DSA:3.40.50.2300 1 130 7.4E-35 T 13-10-2018 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Pfam PF00158 Sigma-54 interaction domain 141 307 1.5E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Gene3D G3DSA:1.10.8.60 312 375 1.4E-19 T 13-10-2018 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Pfam PF00072 Response regulator receiver domain 3 113 2.8E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 SUPERFAMILY SSF52540 140 380 1.89E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 SUPERFAMILY SSF52172 1 183 4.41E-44 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 SMART SM00382 161 305 5.5E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Gene3D G3DSA:3.40.50.300 131 311 1.1E-63 T 13-10-2018 Thivi_4453 0c6dd2230b82832deba5030fd4290c88 444 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 8.8E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_1487 36af51d6e1a81c4cc7d0df62263d53bc 318 SMART SM00382 57 211 8.4E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1487 36af51d6e1a81c4cc7d0df62263d53bc 318 SUPERFAMILY SSF52540 54 284 5.65E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1487 36af51d6e1a81c4cc7d0df62263d53bc 318 Gene3D G3DSA:3.40.50.300 46 218 2.1E-28 T 13-10-2018 Thivi_1487 36af51d6e1a81c4cc7d0df62263d53bc 318 Pfam PF07728 AAA domain (dynein-related subfamily) 61 200 3.3E-23 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_1487 36af51d6e1a81c4cc7d0df62263d53bc 318 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 214 306 7.6E-21 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 Gene3D G3DSA:3.40.50.360 1 182 5.0E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 PIRSF PIRSF038996 1 182 2.6E-51 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 Pfam PF00258 Flavodoxin 6 172 3.5E-27 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 SUPERFAMILY SSF52218 3 180 8.38E-38 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 PRINTS PR00369 Flavodoxin signature 56 67 3.7E-5 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 PRINTS PR00369 Flavodoxin signature 93 103 3.7E-5 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 PRINTS PR00369 Flavodoxin signature 5 18 3.7E-5 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 TIGRFAM TIGR01752 flav_long: flavodoxin 3 178 6.5E-49 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Thivi_1464 d72c742bf647a8dd616598a8e525b328 190 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Thivi_0705 d3ed60748a5f4170999629fb3092090a 398 Gene3D G3DSA:1.20.1720.10 7 385 1.0E-94 T 13-10-2018 Thivi_0705 d3ed60748a5f4170999629fb3092090a 398 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Thivi_0705 d3ed60748a5f4170999629fb3092090a 398 Pfam PF07690 Major Facilitator Superfamily 13 353 2.8E-43 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_0705 d3ed60748a5f4170999629fb3092090a 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 384 7.7E-89 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Thivi_0705 d3ed60748a5f4170999629fb3092090a 398 SUPERFAMILY SSF103473 3 387 3.66E-56 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_0689 329face71ea127e358873340e3902ab9 282 SUPERFAMILY SSF51717 14 280 5.36E-94 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_0689 329face71ea127e358873340e3902ab9 282 Pfam PF00809 Pterin binding enzyme 20 263 1.6E-81 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_0689 329face71ea127e358873340e3902ab9 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 19 34 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_0689 329face71ea127e358873340e3902ab9 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 19 275 7.9E-92 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Thivi_0689 329face71ea127e358873340e3902ab9 282 Gene3D G3DSA:3.20.20.20 2 281 1.7E-104 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_0689 329face71ea127e358873340e3902ab9 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 53 66 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 SUPERFAMILY SSF51735 4 268 9.9E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 152 169 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 3.8E-99 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 Gene3D G3DSA:3.30.360.10 129 236 7.2E-101 T 13-10-2018 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 Gene3D G3DSA:3.40.50.720 6 266 7.2E-101 T 13-10-2018 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 PIRSF PIRSF000161 2 270 4.0E-85 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 127 4.5E-39 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 130 266 1.1E-41 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 SUPERFAMILY SSF55347 129 238 1.59E-37 T 13-10-2018 Thivi_4599 1901e10c2757c7059aa1e778a842a730 272 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 267 34.843 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 SUPERFAMILY SSF52540 153 346 1.08E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Gene3D G3DSA:3.30.360.80 677 749 6.6E-25 T 13-10-2018 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 SMART SM00490 484 567 2.1E-14 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Pfam PF00271 Helicase conserved C-terminal domain 458 567 1.3E-13 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 929 26.829 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Gene3D G3DSA:3.40.50.10810 152 414 4.8E-85 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Pfam PF00176 SNF2 family N-terminal domain 175 344 1.2E-10 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Gene3D G3DSA:3.40.50.300 415 599 9.2E-36 T 13-10-2018 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Pfam PF12137 RNA polymerase recycling family C-terminal 571 927 2.7E-121 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 SUPERFAMILY SSF52540 273 610 6.63E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 SMART SM00487 152 342 1.9E-19 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0292 d44f31bcf9bec0e58a634ba6f9d8604d 929 Gene3D G3DSA:2.30.30.140 5 57 2.1E-20 T 13-10-2018 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 TIGRFAM TIGR00077 lspA: signal peptidase II 31 184 2.4E-39 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 Pfam PF01252 Signal peptidase (SPase) II 35 181 3.4E-39 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 ProSitePatterns PS00855 Signal peptidases II signature. 123 135 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 26 187 16.814 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 162 178 6.6E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 72 80 6.6E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_3220 31bb16535d815b97b70cb323d61db3d3 196 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 120 135 6.6E-19 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Thivi_0735 21b2988a6e1ccb5f230c08f33d7a27ac 422 Pfam PF13194 Domain of unknown function (DUF4010) 184 392 3.3E-66 T 13-10-2018 IPR025105 Domain of unknown function DUF4010 Thivi_0735 21b2988a6e1ccb5f230c08f33d7a27ac 422 Pfam PF02308 MgtC family 11 136 7.8E-20 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 ProSitePatterns PS00194 Thioredoxin family active site. 707 725 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 SUPERFAMILY SSF74863 203 327 3.79E-25 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 SUPERFAMILY SSF74863 49 167 5.49E-31 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Pfam PF11412 Disulphide bond corrector protein DsbC 204 326 5.6E-24 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Pfam PF11412 Disulphide bond corrector protein DsbC 50 167 4.9E-29 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Gene3D G3DSA:2.60.40.1250 43 184 2.9E-37 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Gene3D G3DSA:2.60.40.1250 198 343 3.0E-33 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 SUPERFAMILY SSF52833 694 797 1.62E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Gene3D G3DSA:3.40.30.10 677 799 4.5E-32 T 13-10-2018 Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Pfam PF13899 Thioredoxin-like 690 773 2.4E-15 T 13-10-2018 Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 387 598 1.9E-19 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Thivi_1096 6353a7b9caafc1932e1706ad98e332f6 801 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 29 800 35.56 T 13-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Thivi_3422 9098f9e2d7db4ec8d2b2e2ce5cbe78eb 517 Pfam PF00069 Protein kinase domain 41 295 2.1E-35 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_3422 9098f9e2d7db4ec8d2b2e2ce5cbe78eb 517 SUPERFAMILY SSF56112 38 297 3.14E-57 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3422 9098f9e2d7db4ec8d2b2e2ce5cbe78eb 517 Gene3D G3DSA:1.25.40.10 416 514 4.1E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3422 9098f9e2d7db4ec8d2b2e2ce5cbe78eb 517 Gene3D G3DSA:1.10.510.10 125 312 5.3E-32 T 13-10-2018 Thivi_3422 9098f9e2d7db4ec8d2b2e2ce5cbe78eb 517 Gene3D G3DSA:3.30.200.20 1 124 1.7E-23 T 13-10-2018 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 SUPERFAMILY SSF50475 3 322 5.49E-126 T 13-10-2018 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 Gene3D G3DSA:1.20.5.570 455 492 8.5E-17 T 13-10-2018 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 4.5E-172 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 71.313 T 13-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 SUPERFAMILY SSF143968 323 487 7.72E-67 T 13-10-2018 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 Gene3D G3DSA:3.40.1670.10 337 454 1.8E-50 T 13-10-2018 Thivi_3866 81b899f08f034c5b9665301cdcae18dd 492 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 7.4E-171 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Thivi_0852 08a84bd8f54e4d066b2e6bb3a06b2b4a 131 SUPERFAMILY SSF54427 30 129 1.26E-35 T 13-10-2018 IPR032710 NTF2-like domain superfamily Thivi_0852 08a84bd8f54e4d066b2e6bb3a06b2b4a 131 Gene3D G3DSA:3.10.450.50 7 130 1.7E-38 T 13-10-2018 Thivi_0852 08a84bd8f54e4d066b2e6bb3a06b2b4a 131 SUPERFAMILY SSF103642 4 24 2.29E-5 T 13-10-2018 Thivi_0852 08a84bd8f54e4d066b2e6bb3a06b2b4a 131 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 5 128 28.946 T 13-10-2018 IPR023006 Uncharacterised protein family UPF0225 Thivi_0852 08a84bd8f54e4d066b2e6bb3a06b2b4a 131 Pfam PF02810 SEC-C motif 8 23 1.4E-5 T 13-10-2018 IPR004027 SEC-C motif Thivi_3242 ba0b87a67173be692fb68001869b9049 482 Gene3D G3DSA:3.30.1330.120 287 425 1.2E-192 T 13-10-2018 Thivi_3242 ba0b87a67173be692fb68001869b9049 482 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 15 482 2.9E-254 T 13-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 Thivi_3242 ba0b87a67173be692fb68001869b9049 482 Gene3D G3DSA:1.10.4100.10 24 460 1.2E-192 T 13-10-2018 Thivi_3242 ba0b87a67173be692fb68001869b9049 482 SUPERFAMILY SSF103378 15 481 3.14E-151 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 Thivi_3242 ba0b87a67173be692fb68001869b9049 482 Pfam PF03972 MmgE/PrpD family 20 465 1.2E-155 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 Thivi_0932 059866b42d3dd4b1f3e5604579622478 138 Pfam PF01475 Ferric uptake regulator family 9 128 9.4E-44 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Thivi_0932 059866b42d3dd4b1f3e5604579622478 138 Gene3D G3DSA:1.10.10.10 1 82 3.0E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0932 059866b42d3dd4b1f3e5604579622478 138 SUPERFAMILY SSF46785 4 132 2.68E-43 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0932 059866b42d3dd4b1f3e5604579622478 138 Gene3D G3DSA:3.30.1490.190 84 138 2.7E-24 T 13-10-2018 Thivi_0546 8ca72605dcf2c6759b6eae107b2e41bf 130 Gene3D G3DSA:3.40.1260.10 1 130 2.3E-55 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0546 8ca72605dcf2c6759b6eae107b2e41bf 130 SUPERFAMILY SSF75169 1 128 2.69E-40 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0546 8ca72605dcf2c6759b6eae107b2e41bf 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 1.8E-50 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Thivi_0546 8ca72605dcf2c6759b6eae107b2e41bf 130 Pfam PF02635 DsrE/DsrF-like family 1 128 1.8E-29 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 14 389 3.8E-117 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 Gene3D G3DSA:2.130.10.10 31 393 3.3E-95 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 198 229 210.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 72 103 2.7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 152 184 7.6E-5 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 327 359 66.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 249 280 1.0E-4 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 287 318 8.2 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SMART SM00564 112 143 3.7 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 Pfam PF13360 PQQ-like domain 108 317 3.4E-43 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 Pfam PF13360 PQQ-like domain 331 390 1.2E-4 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 SUPERFAMILY SSF50998 36 392 9.26E-71 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Thivi_2725 6a30c86dde6a8d0fd1f8273e874ed959 422 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 6 391 34.941 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB Thivi_1955 8e36176dca7f258a09690bfd93126deb 201 SUPERFAMILY SSF47616 71 199 2.17E-10 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Thivi_1955 8e36176dca7f258a09690bfd93126deb 201 Gene3D G3DSA:1.20.1050.10 81 191 2.4E-64 T 13-10-2018 Thivi_1955 8e36176dca7f258a09690bfd93126deb 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 76 4.1E-16 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Thivi_1955 8e36176dca7f258a09690bfd93126deb 201 SUPERFAMILY SSF52833 1 85 3.71E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1955 8e36176dca7f258a09690bfd93126deb 201 Gene3D G3DSA:3.40.30.10 4 193 2.4E-64 T 13-10-2018 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 Pfam PF03600 Citrate transporter 28 535 2.8E-53 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 SUPERFAMILY SSF116726 212 293 2.22E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 537 553 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 SUPERFAMILY SSF116726 297 384 7.85E-19 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 Gene3D G3DSA:3.30.70.1450 305 377 1.1E-14 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 Gene3D G3DSA:3.30.70.1450 215 290 5.3E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 Pfam PF02080 TrkA-C domain 219 287 1.6E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_3037 a05ffa18bdf9c708d7b1fb6158b63dc9 589 Pfam PF02080 TrkA-C domain 309 369 5.0E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 Gene3D G3DSA:3.40.30.10 53 205 1.2E-26 T 13-10-2018 Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 Gene3D G3DSA:3.40.30.10 221 340 4.3E-13 T 13-10-2018 Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 SUPERFAMILY SSF52833 217 328 6.34E-8 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 Pfam PF13098 Thioredoxin-like domain 71 172 1.4E-17 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 Pfam PF13098 Thioredoxin-like domain 223 319 2.7E-6 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_2509 98cebcd47ebace9be6e21fdd3a5e84a5 344 SUPERFAMILY SSF52833 58 184 6.19E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 224 54.849 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 Pfam PF06508 Queuosine biosynthesis protein QueC 4 218 2.1E-74 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 PIRSF PIRSF006293 1 229 5.7E-74 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 Gene3D G3DSA:3.40.50.620 2 225 9.2E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 SUPERFAMILY SSF52402 2 226 8.6E-62 T 13-10-2018 Thivi_0092 bbb37ee0b915d48376444935995a60bb 233 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 211 1.4E-58 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Thivi_2688 febaa5bc49cc4e96d51afd86f3916ace 282 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 61 221 3.5E-27 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Thivi_2688 febaa5bc49cc4e96d51afd86f3916ace 282 Gene3D G3DSA:3.40.50.300 41 252 3.7E-58 T 13-10-2018 Thivi_2688 febaa5bc49cc4e96d51afd86f3916ace 282 PIRSF PIRSF005624 26 257 5.1E-88 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Thivi_2688 febaa5bc49cc4e96d51afd86f3916ace 282 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 34 245 8.4E-79 T 13-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Thivi_2688 febaa5bc49cc4e96d51afd86f3916ace 282 SUPERFAMILY SSF52540 32 246 2.61E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 51 73 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 255 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 193 216 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 74 98 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 261 287 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 219 236 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 289 302 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 164 188 6.0E-71 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 66 212 1.0E-30 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 PIRSF PIRSF000310 9 359 2.8E-133 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 Gene3D G3DSA:3.40.50.700 53 231 1.5E-68 T 13-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 232 311 4.8E-33 T 13-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 Gene3D G3DSA:4.10.480.10 234 345 5.2E-40 T 13-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 20 38 1.8E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 SUPERFAMILY SSF56770 52 315 1.44E-84 T 13-10-2018 Thivi_2698 608cf7cf2510d41d0a10c7c50a77f5c3 369 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 8 339 2.0E-124 T 13-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Thivi_1825 1e7dd642b9bdff5dbd2b128c3099061c 678 Pfam PF03030 Inorganic H+ pyrophosphatase 16 673 1.0E-260 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_1825 1e7dd642b9bdff5dbd2b128c3099061c 678 PIRSF PIRSF001265 2 678 9.8E-250 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_1825 1e7dd642b9bdff5dbd2b128c3099061c 678 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 4 678 25.166 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_1825 1e7dd642b9bdff5dbd2b128c3099061c 678 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 14 678 5.1E-249 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 Gene3D G3DSA:3.90.1860.10 98 365 6.3E-69 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 Gene3D G3DSA:3.90.1860.10 2 97 4.3E-19 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 Pfam PF01139 tRNA-splicing ligase RtcB 22 86 2.9E-10 T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 SUPERFAMILY SSF103365 4 365 3.4E-94 T 13-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 Pfam PF01139 tRNA-splicing ligase RtcB 117 365 3.2E-54 T 13-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Thivi_0437 851c6ca8235a29e4742f17878adc3813 384 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 6 360 1.2E-144 T 13-10-2018 IPR017510 Release factor H-coupled RctB family protein Thivi_1776 35f49bf53be6210004ea0765ee2fd741 149 SUPERFAMILY SSF81333 76 146 3.92E-14 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Thivi_1776 35f49bf53be6210004ea0765ee2fd741 149 Pfam PF00137 ATP synthase subunit C 85 144 4.0E-15 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Thivi_1776 35f49bf53be6210004ea0765ee2fd741 149 Gene3D G3DSA:1.20.120.610 67 147 5.9E-16 T 13-10-2018 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Gene3D G3DSA:2.40.30.10 74 193 1.7E-30 T 13-10-2018 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 SUPERFAMILY SSF63380 76 194 1.55E-20 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00406 Cytochrome B5 reductase signature 180 194 6.5E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00406 Cytochrome B5 reductase signature 203 222 6.5E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00406 Cytochrome B5 reductase signature 298 306 6.5E-9 T 13-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 357 424 1.2E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Gene3D G3DSA:3.10.20.30 342 432 3.2E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Pfam PF00175 Oxidoreductase NAD-binding domain 204 310 1.6E-19 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 SUPERFAMILY SSF54292 322 431 2.62E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 135 142 7.0E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 228 237 7.0E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 203 222 7.0E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 167 176 7.0E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Gene3D G3DSA:3.40.50.80 198 335 2.1E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 Pfam PF00970 Oxidoreductase FAD-binding domain 110 193 2.4E-5 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 385 393 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Thivi_4469 85851daf01f886f13b713df30ddbce9d 432 SUPERFAMILY SSF52343 197 333 1.57E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3663 e3f0a230b2dca7ef45cd0ace46ea644b 277 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 22 249 7.3E-108 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 Thivi_3663 e3f0a230b2dca7ef45cd0ace46ea644b 277 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 22 247 4.0E-99 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Thivi_3663 e3f0a230b2dca7ef45cd0ace46ea644b 277 SUPERFAMILY SSF52540 54 243 1.69E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3663 e3f0a230b2dca7ef45cd0ace46ea644b 277 PIRSF PIRSF028756 1 275 1.3E-118 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Thivi_3663 e3f0a230b2dca7ef45cd0ace46ea644b 277 Gene3D G3DSA:3.40.50.300 2 259 2.4E-91 T 13-10-2018 Thivi_4108 3e8bf93869d898ba09f6b9639eb02de4 357 Gene3D G3DSA:3.30.70.270 166 336 1.5E-53 T 13-10-2018 Thivi_4108 3e8bf93869d898ba09f6b9639eb02de4 357 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 332 3.0E-42 T 13-10-2018 IPR000160 GGDEF domain Thivi_4108 3e8bf93869d898ba09f6b9639eb02de4 357 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 333 6.6E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_4108 3e8bf93869d898ba09f6b9639eb02de4 357 SMART SM00267 169 337 2.5E-53 T 13-10-2018 IPR000160 GGDEF domain Thivi_4108 3e8bf93869d898ba09f6b9639eb02de4 357 SUPERFAMILY SSF55073 185 335 2.43E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 Gene3D G3DSA:1.20.120.30 409 509 5.8E-6 T 13-10-2018 Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 SUPERFAMILY SSF58104 105 409 4.45E-67 T 13-10-2018 Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 221 376 5.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 SMART SM00283 148 409 1.4E-63 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 Pfam PF13682 Chemoreceptor zinc-binding domain 425 489 8.0E-10 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain Thivi_2443 c7aafe728faf5786fe1de393eac7e9df 526 Gene3D G3DSA:1.10.287.950 79 408 6.1E-63 T 13-10-2018 Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 SUPERFAMILY SSF52540 856 1192 7.31E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1189 0.0 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 Gene3D G3DSA:3.40.50.300 969 1197 1.4E-46 T 13-10-2018 Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 Gene3D G3DSA:3.40.50.300 1 314 2.3E-51 T 13-10-2018 Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1182 3.9E-64 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1191 22.708 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 SUPERFAMILY SSF52540 1 1174 1.1E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4487 fb165529739c7d8ee676b48c4b9be7b7 1199 PIRSF PIRSF005719 1 1197 3.9E-268 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 Gene3D G3DSA:3.40.50.11740 61 303 3.2E-106 T 13-10-2018 Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 Gene3D G3DSA:1.10.10.2140 317 368 5.2E-24 T 13-10-2018 Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 Pfam PF01924 Hydrogenase formation hypA family 12 366 2.2E-153 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 Gene3D G3DSA:3.40.50.11750 27 262 3.2E-106 T 13-10-2018 Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 369 2.7E-141 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Thivi_3698 5093889a42aaa8bb2ba82425e324f023 379 PIRSF PIRSF005622 1 371 3.7E-156 T 13-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 PIRSF PIRSF005917 1 280 1.6E-96 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 277 2.9E-80 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 7 228 35.936 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 Gene3D G3DSA:3.30.950.10 115 234 7.0E-37 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 SUPERFAMILY SSF53790 6 226 2.09E-74 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 202 5.2E-25 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_2329 f92f0e9ac1eb3d6a75a1debeaa5fb9e8 286 Gene3D G3DSA:3.40.1010.10 1 114 1.7E-42 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_3685 2b66fdaf8a2ae678f2cd253ff18894e9 755 SUPERFAMILY SSF81442 280 746 3.27E-66 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3685 2b66fdaf8a2ae678f2cd253ff18894e9 755 Gene3D G3DSA:1.20.210.10 226 754 1.2E-163 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3685 2b66fdaf8a2ae678f2cd253ff18894e9 755 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 288 731 4.1E-62 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3828 6ab76708e1252dfd6f470572dc33bb75 162 Pfam PF04093 rod shape-determining protein MreD 6 152 2.1E-22 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Thivi_3828 6ab76708e1252dfd6f470572dc33bb75 162 PIRSF PIRSF018472 1 162 7.8E-49 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Thivi_3828 6ab76708e1252dfd6f470572dc33bb75 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 152 6.8E-32 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Thivi_3311 efdae60e13a3b226c4274dee3a3255e6 188 Gene3D G3DSA:3.40.1740.10 3 188 3.5E-69 T 13-10-2018 Thivi_3311 efdae60e13a3b226c4274dee3a3255e6 188 Pfam PF02622 Uncharacterized ACR, COG1678 16 174 3.9E-50 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Thivi_3311 efdae60e13a3b226c4274dee3a3255e6 188 SUPERFAMILY SSF143456 6 188 1.1E-64 T 13-10-2018 Thivi_3311 efdae60e13a3b226c4274dee3a3255e6 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 188 39.134 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 159 180 3.3E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 202 216 3.3E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 11 33 3.3E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 34 54 3.3E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 PRINTS PR00075 Fatty acid desaturase family 1 signature 71 100 3.3E-5 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 Pfam PF00487 Fatty acid desaturase 11 214 2.2E-15 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Thivi_3472 562cdad45518b33b6acd3834351e1d1e 395 Pfam PF01610 Transposase 268 387 4.9E-12 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Thivi_3814 3495c41537ba818046230ee9a8be5556 163 Pfam PF00583 Acetyltransferase (GNAT) family 40 128 1.4E-13 T 13-10-2018 IPR000182 GNAT domain Thivi_3814 3495c41537ba818046230ee9a8be5556 163 SUPERFAMILY SSF55729 10 154 9.31E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_3814 3495c41537ba818046230ee9a8be5556 163 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 19 149 1.3E-35 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Thivi_3814 3495c41537ba818046230ee9a8be5556 163 Gene3D G3DSA:3.40.630.30 11 158 3.7E-40 T 13-10-2018 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 SUPERFAMILY SSF53790 1 251 1.57E-32 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 Gene3D G3DSA:3.30.950.10 145 255 3.3E-42 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 Gene3D G3DSA:3.40.1010.10 1 144 3.4E-37 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 PIRSF PIRSF036525 1 256 1.5E-90 T 13-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 224 2.7E-28 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_1710 8033df850a93fb50d044f4e8d9d493e2 257 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 2 251 1.7E-88 T 13-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 Thivi_2161 5a2389354a4564486ec3df8ae0a3c9ed 107 Gene3D G3DSA:3.40.250.10 5 106 5.1E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2161 5a2389354a4564486ec3df8ae0a3c9ed 107 Pfam PF00581 Rhodanese-like domain 8 97 2.8E-15 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2161 5a2389354a4564486ec3df8ae0a3c9ed 107 SMART SM00450 6 101 7.7E-25 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_2161 5a2389354a4564486ec3df8ae0a3c9ed 107 SUPERFAMILY SSF52821 4 104 7.46E-36 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3245 cf575cdfe655722929e1e3280be85824 274 SUPERFAMILY SSF56300 11 251 1.54E-30 T 13-10-2018 Thivi_3245 cf575cdfe655722929e1e3280be85824 274 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 15 228 4.2E-10 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Thivi_3245 cf575cdfe655722929e1e3280be85824 274 Gene3D G3DSA:3.60.21.10 12 247 7.2E-16 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_2050 1e9aa2cbf88bb34c15f82af46da80538 204 Gene3D G3DSA:2.60.200.20 66 182 1.2E-17 T 13-10-2018 Thivi_2050 1e9aa2cbf88bb34c15f82af46da80538 204 SUPERFAMILY SSF49879 78 197 1.13E-15 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_2050 1e9aa2cbf88bb34c15f82af46da80538 204 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 91 182 7.5E-9 T 13-10-2018 IPR032030 YscD, cytoplasmic domain Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 Gene3D G3DSA:3.40.640.10 16 250 8.9E-75 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 Gene3D G3DSA:3.90.1150.10 251 362 7.5E-38 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 361 43.826 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 SUPERFAMILY SSF53383 3 358 1.35E-91 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 PIRSF PIRSF000525 1 362 3.9E-132 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Thivi_0640 23f7dfd7ae6d6ef978ee33e18bbe922f 367 Pfam PF00266 Aminotransferase class-V 5 350 1.4E-35 T 13-10-2018 IPR000192 Aminotransferase class V domain Thivi_2285 3fa31eac40676039d40b124bd3d29733 633 Pfam PF05947 Type VI secretion system, TssF 6 631 4.9E-232 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Thivi_2285 3fa31eac40676039d40b124bd3d29733 633 PIRSF PIRSF028304 1 633 1.8E-186 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Thivi_2285 3fa31eac40676039d40b124bd3d29733 633 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 630 2.5E-200 T 13-10-2018 IPR010272 Type VI secretion system, TssF-like Thivi_2716 7c857efa07c02637ef0864181c420563 185 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 1.2E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_2716 7c857efa07c02637ef0864181c420563 185 Gene3D G3DSA:2.40.50.140 1 66 5.3E-17 T 13-10-2018 Thivi_2716 7c857efa07c02637ef0864181c420563 185 SMART SM00357 4 68 3.0E-5 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_2716 7c857efa07c02637ef0864181c420563 185 SUPERFAMILY SSF50249 1 67 8.14E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2716 7c857efa07c02637ef0864181c420563 185 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 35 - T 13-10-2018 IPR019844 Cold-shock conserved site Thivi_2716 7c857efa07c02637ef0864181c420563 185 Pfam PF05901 Excalibur calcium-binding domain 147 180 9.7E-9 T 13-10-2018 IPR008613 Excalibur calcium-binding domain Thivi_4602 fe31eabffe6760b8d2f3b1384dffeafb 482 Gene3D G3DSA:1.10.760.10 297 417 1.4E-6 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4602 fe31eabffe6760b8d2f3b1384dffeafb 482 SUPERFAMILY SSF46626 287 481 1.72E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 4.9E-28 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.9E-28 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.9E-28 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 4.9E-28 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 4.9E-28 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 9.4E-56 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PIRSF PIRSF000350 1 462 1.9E-65 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 Gene3D G3DSA:3.30.390.30 345 463 1.3E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.5E-49 T 13-10-2018 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 Gene3D G3DSA:3.50.50.60 157 275 1.2E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 Gene3D G3DSA:3.50.50.60 6 332 1.2E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 456 7.5E-26 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 SUPERFAMILY SSF55424 345 462 7.9E-28 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_3370 0d721bf5bb45c89b53d78fba5fff1baf 465 SUPERFAMILY SSF51905 1 333 2.92E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0235 551e29002ffea66bff7f01dfaec1712d 572 SUPERFAMILY SSF141523 303 447 4.58E-22 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_0235 551e29002ffea66bff7f01dfaec1712d 572 Pfam PF01471 Putative peptidoglycan binding domain 221 277 3.2E-9 T 13-10-2018 IPR002477 Peptidoglycan binding-like Thivi_0235 551e29002ffea66bff7f01dfaec1712d 572 SUPERFAMILY SSF47090 205 280 6.2E-13 T 13-10-2018 IPR036365 PGBD-like superfamily Thivi_0235 551e29002ffea66bff7f01dfaec1712d 572 Pfam PF03734 L,D-transpeptidase catalytic domain 306 457 5.1E-28 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_0235 551e29002ffea66bff7f01dfaec1712d 572 Gene3D G3DSA:2.40.440.10 238 455 1.1E-34 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 2.2E-120 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 5.6E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 5.6E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 5.6E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 5.6E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 5.6E-37 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 5.2E-122 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 SUPERFAMILY SSF160544 245 352 1.28E-37 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_0371 8eb4fc93fbbe38262a5adee6fa590961 384 Gene3D G3DSA:3.40.1690.10 218 360 1.0E-53 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Thivi_1162 68c420bfeebaccc5010984ec8ed7c47c 256 SUPERFAMILY SSF48613 111 253 6.67E-11 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Thivi_1162 68c420bfeebaccc5010984ec8ed7c47c 256 Pfam PF11251 Protein of unknown function (DUF3050) 17 249 3.0E-91 T 13-10-2018 IPR024423 Protein of unknown function DUF3050 Thivi_1162 68c420bfeebaccc5010984ec8ed7c47c 256 Gene3D G3DSA:1.20.910.10 8 254 1.1E-39 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Thivi_0774 0da0b2f73823528c91bfeac95dbce11c 811 Pfam PF07196 Flagellin hook IN motif 158 199 1.4E-6 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Thivi_0774 0da0b2f73823528c91bfeac95dbce11c 811 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 111 1.6E-20 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Thivi_0774 0da0b2f73823528c91bfeac95dbce11c 811 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 235 403 1.5E-29 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Thivi_0774 0da0b2f73823528c91bfeac95dbce11c 811 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 722 791 5.8E-10 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 Pfam PF02779 Transketolase, pyrimidine binding domain 13 165 1.3E-25 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 SMART SM00861 2 166 3.1E-32 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 Gene3D G3DSA:3.40.50.970 5 172 1.7E-49 T 13-10-2018 Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 Pfam PF02780 Transketolase, C-terminal domain 177 295 1.1E-14 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 SUPERFAMILY SSF52922 173 305 2.75E-21 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 SUPERFAMILY SSF52518 9 167 3.47E-45 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3123 d3ce1edec129a8ed6f4041874d029311 335 Gene3D G3DSA:3.40.50.920 177 307 1.5E-26 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_0538 cf9eaf09f36bf0e3a4ff48fb5f29604f 494 SUPERFAMILY SSF53474 112 338 6.87E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0538 cf9eaf09f36bf0e3a4ff48fb5f29604f 494 Pfam PF12146 Serine aminopeptidase, S33 115 234 1.6E-14 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Thivi_0538 cf9eaf09f36bf0e3a4ff48fb5f29604f 494 Gene3D G3DSA:3.40.50.1820 104 342 2.0E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0117 3eb0d916b167e65496a67ae351588d4f 187 SUPERFAMILY SSF46785 5 132 3.36E-42 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0117 3eb0d916b167e65496a67ae351588d4f 187 Pfam PF01475 Ferric uptake regulator family 9 128 5.9E-40 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Thivi_0117 3eb0d916b167e65496a67ae351588d4f 187 Gene3D G3DSA:3.30.1490.190 83 137 8.2E-22 T 13-10-2018 Thivi_0117 3eb0d916b167e65496a67ae351588d4f 187 Gene3D G3DSA:1.10.10.10 2 82 2.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0887 c386c186a0ade713cc01b2c0fb342574 257 Gene3D G3DSA:3.90.550.10 1 257 2.2E-70 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0887 c386c186a0ade713cc01b2c0fb342574 257 SUPERFAMILY SSF53448 1 257 1.91E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0887 c386c186a0ade713cc01b2c0fb342574 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 3.2E-138 T 13-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 Thivi_0887 c386c186a0ade713cc01b2c0fb342574 257 Pfam PF00483 Nucleotidyl transferase 2 210 5.8E-17 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_0992 83e5647717180e5f2de5f9bbccf299e7 295 Pfam PF01435 Peptidase family M48 83 293 3.7E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Thivi_0992 83e5647717180e5f2de5f9bbccf299e7 295 Hamap MF_00188 Protease HtpX [htpX]. 1 293 25.698 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Thivi_0992 83e5647717180e5f2de5f9bbccf299e7 295 Gene3D G3DSA:3.30.2010.10 71 164 9.5E-34 T 13-10-2018 Thivi_0176 6660d597e391e6f4d016ba1fdbfcaf50 328 SUPERFAMILY SSF50969 57 304 7.22E-20 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Thivi_0176 6660d597e391e6f4d016ba1fdbfcaf50 328 Pfam PF07433 Protein of unknown function (DUF1513) 70 243 5.7E-65 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Thivi_0176 6660d597e391e6f4d016ba1fdbfcaf50 328 Gene3D G3DSA:2.130.10.10 88 319 4.2E-15 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_0176 6660d597e391e6f4d016ba1fdbfcaf50 328 PIRSF PIRSF028101 1 246 1.7E-61 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Thivi_0176 6660d597e391e6f4d016ba1fdbfcaf50 328 PIRSF PIRSF028101 238 318 0.0018 T 13-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 1.2E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 7.1E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 Gene3D G3DSA:3.30.700.10 12 147 2.2E-22 T 13-10-2018 Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 SUPERFAMILY SSF54523 12 129 1.02E-19 T 13-10-2018 Thivi_2201 4060e5ed967acb24176e1c47d77a6ca7 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 33 134 2.7E-19 T 13-10-2018 IPR031982 Type IV minor pilin ComP Thivi_2305 24e12409c6347cfafe94d24e7ede5aed 396 Gene3D G3DSA:1.20.1250.20 215 393 7.1E-7 T 13-10-2018 Thivi_2305 24e12409c6347cfafe94d24e7ede5aed 396 SUPERFAMILY SSF103473 18 391 3.53E-19 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_2305 24e12409c6347cfafe94d24e7ede5aed 396 Gene3D G3DSA:1.20.1250.20 17 201 1.4E-10 T 13-10-2018 Thivi_2171 81b341586b717b8ccb8e445f56d77d5a 151 SUPERFAMILY SSF158682 20 149 3.66E-21 T 13-10-2018 IPR029024 TerB-like Thivi_2171 81b341586b717b8ccb8e445f56d77d5a 151 Pfam PF05099 Tellurite resistance protein TerB 9 149 3.9E-24 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Thivi_2171 81b341586b717b8ccb8e445f56d77d5a 151 Gene3D G3DSA:1.10.3680.10 2 151 8.0E-42 T 13-10-2018 IPR029024 TerB-like Thivi_3987 f2ce37b3a29dadc02734090995331688 148 Pfam PF00137 ATP synthase subunit C 16 69 2.1E-6 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Thivi_3987 f2ce37b3a29dadc02734090995331688 148 Pfam PF00137 ATP synthase subunit C 83 142 7.1E-12 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Thivi_3987 f2ce37b3a29dadc02734090995331688 148 SUPERFAMILY SSF81333 79 143 5.49E-10 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Thivi_3987 f2ce37b3a29dadc02734090995331688 148 Gene3D G3DSA:1.20.120.610 2 145 1.9E-28 T 13-10-2018 Thivi_0775 6e8aa9260895d229c1a3e6c5ceefadde 165 Pfam PF03646 FlaG protein 65 163 3.0E-24 T 13-10-2018 IPR005186 FlaG protein Thivi_0775 6e8aa9260895d229c1a3e6c5ceefadde 165 SUPERFAMILY SSF160214 67 165 3.79E-24 T 13-10-2018 IPR035924 FlaG-like superfamily Thivi_0775 6e8aa9260895d229c1a3e6c5ceefadde 165 Gene3D G3DSA:3.30.160.170 63 161 5.4E-16 T 13-10-2018 IPR035924 FlaG-like superfamily Thivi_0009 165380224e280d9e317862c4211c29b5 206 Gene3D G3DSA:3.90.70.10 27 188 8.0E-25 T 13-10-2018 Thivi_0009 165380224e280d9e317862c4211c29b5 206 Pfam PF03412 Peptidase C39 family 36 171 3.0E-12 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Thivi_1131 2dc8a821596d4a597f4edacd436f87a4 476 Gene3D G3DSA:1.10.645.10 1 451 2.6E-100 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1131 2dc8a821596d4a597f4edacd436f87a4 476 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 442 451 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_1131 2dc8a821596d4a597f4edacd436f87a4 476 Pfam PF00374 Nickel-dependent hydrogenase 268 451 1.1E-12 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_1131 2dc8a821596d4a597f4edacd436f87a4 476 Pfam PF00374 Nickel-dependent hydrogenase 40 116 9.0E-18 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_1131 2dc8a821596d4a597f4edacd436f87a4 476 SUPERFAMILY SSF56762 4 451 1.44E-134 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 SMART SM00100 26 147 5.1E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 SUPERFAMILY SSF46785 161 240 5.64E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 SMART SM00419 183 231 9.6E-12 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 Gene3D G3DSA:1.10.10.10 161 242 5.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 5.3E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 5.3E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 Gene3D G3DSA:2.60.120.10 39 160 9.2E-43 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 ProSitePatterns PS00042 Crp-type HTH domain signature. 191 214 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 Pfam PF13545 Crp-like helix-turn-helix domain 164 237 2.6E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 Pfam PF00027 Cyclic nucleotide-binding domain 46 128 1.3E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3968 21b4c93d34d1ef195b76925f7e760062 253 SUPERFAMILY SSF51206 19 158 1.57E-28 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 195 206 7.4E-8 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 93 104 7.4E-8 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 140 150 7.4E-8 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 410 427 7.4E-8 T 13-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 Gene3D G3DSA:2.40.160.10 17 455 2.8E-70 T 13-10-2018 IPR023614 Porin domain superfamily Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 SUPERFAMILY SSF56935 87 455 3.36E-53 T 13-10-2018 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00184 Neisseria sp. porin signature 233 250 4.2E-10 T 13-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00184 Neisseria sp. porin signature 194 211 4.2E-10 T 13-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 PRINTS PR00184 Neisseria sp. porin signature 95 120 4.2E-10 T 13-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 Thivi_4239 ca61114462e47f5d0f511fff9fdaf8b8 455 Pfam PF13609 Gram-negative porin 11 434 9.9E-38 T 13-10-2018 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 SUPERFAMILY SSF50331 1 68 4.46E-23 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2524 c2dea94b876749da264a0d40adc46335 140 Pfam PF03459 TOBE domain 73 136 2.1E-13 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 Pfam PF03459 TOBE domain 3 65 2.4E-19 T 13-10-2018 IPR005116 Transport-associated OB, type 1 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 SUPERFAMILY SSF50331 72 138 9.72E-19 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Thivi_2524 c2dea94b876749da264a0d40adc46335 140 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 72 138 1.6E-18 T 13-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 68 2.1E-26 T 13-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 Gene3D G3DSA:2.40.50.100 1 67 4.1E-27 T 13-10-2018 Thivi_2524 c2dea94b876749da264a0d40adc46335 140 Gene3D G3DSA:2.40.50.100 69 140 7.8E-24 T 13-10-2018 Thivi_4425 0ca34dbbea044a057022eb6d58a375f6 160 Pfam PF05069 Phage virion morphogenesis family 9 136 1.3E-19 T 13-10-2018 IPR006522 Phage virion morphogensis protein Thivi_4425 0ca34dbbea044a057022eb6d58a375f6 160 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 9 135 7.0E-12 T 13-10-2018 IPR006522 Phage virion morphogensis protein Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 SUPERFAMILY SSF54913 1 112 1.72E-44 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 PRINTS PR00340 P-II protein signature 2 17 3.3E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 PRINTS PR00340 P-II protein signature 52 75 3.3E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 PRINTS PR00340 P-II protein signature 83 103 3.3E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 PRINTS PR00340 P-II protein signature 23 41 3.3E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-42 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 PIRSF PIRSF039144 1 112 5.8E-54 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3361 f5917080ce83452c2dd41a1b6f1ac346 112 SMART SM00938 4 105 5.8E-66 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Thivi_3065 fcb056d7d8be5e60008c5b68c382955e 163 Gene3D G3DSA:1.10.8.640 27 114 1.6E-33 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Thivi_3065 fcb056d7d8be5e60008c5b68c382955e 163 Pfam PF03918 Cytochrome C biogenesis protein 20 155 4.0E-52 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Thivi_4128 456698afa7a5f14bfe5554e08ea7c9f3 496 Gene3D G3DSA:3.40.640.10 123 378 8.3E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_4128 456698afa7a5f14bfe5554e08ea7c9f3 496 SUPERFAMILY SSF53383 47 491 3.06E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4128 456698afa7a5f14bfe5554e08ea7c9f3 496 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 110 431 9.2E-56 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Thivi_4128 456698afa7a5f14bfe5554e08ea7c9f3 496 Gene3D G3DSA:3.90.1150.170 41 485 8.3E-105 T 13-10-2018 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 2.1E-5 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 2.1E-5 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 246 270 2.1E-5 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 108 127 2.1E-5 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 Pfam PF00361 Proton-conducting membrane transporter 125 418 5.1E-77 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 470 2.1E-144 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Thivi_3925 3d9541d6a7ee96726b3466b401de603f 479 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 471 18.277 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 Pfam PF00085 Thioredoxin 20 123 3.8E-25 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 PRINTS PR00421 Thioredoxin family signature 88 99 4.7E-7 T 13-10-2018 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 PRINTS PR00421 Thioredoxin family signature 38 46 4.7E-7 T 13-10-2018 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 PRINTS PR00421 Thioredoxin family signature 46 55 4.7E-7 T 13-10-2018 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 SUPERFAMILY SSF52833 14 124 8.96E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 ProSitePatterns PS00194 Thioredoxin family active site. 39 57 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 Gene3D G3DSA:3.40.30.10 12 125 5.0E-29 T 13-10-2018 Thivi_2571 d249eca93f1369d4d308abcd0d4278fe 128 PIRSF PIRSF000077 15 124 1.8E-27 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 117 3.4E-24 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 Gene3D G3DSA:1.20.1300.10 1 122 1.8E-33 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 PIRSF PIRSF000178 1 123 1.1E-23 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 120 8.2E-33 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4351 8370f5ee3782d01a2496574ac47fe786 127 SUPERFAMILY SSF81343 3 120 1.94E-24 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 Pfam PF00361 Proton-conducting membrane transporter 127 422 2.2E-42 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 3.9E-12 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.9E-12 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.9E-12 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 3.9E-12 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2960 7f46b42bdbc9cd235ebe02eab87ce012 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 3.9E-12 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 SUPERFAMILY SSF54862 37 144 6.7E-24 T 13-10-2018 Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 7.9E-45 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 6.9E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 Gene3D G3DSA:3.30.70.3270 37 162 6.2E-36 T 13-10-2018 Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3920 3841dfc886c8ec2c7219c1320f0a10ec 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 27.481 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1152 7b780da9d7b75f2872a5091c7f33b675 293 Gene3D G3DSA:1.10.150.650 98 169 1.1E-79 T 13-10-2018 Thivi_1152 7b780da9d7b75f2872a5091c7f33b675 293 Gene3D G3DSA:3.20.20.140 6 250 1.1E-79 T 13-10-2018 Thivi_1152 7b780da9d7b75f2872a5091c7f33b675 293 SUPERFAMILY SSF89550 4 277 3.14E-48 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Thivi_1152 7b780da9d7b75f2872a5091c7f33b675 293 Pfam PF02811 PHP domain 6 73 3.6E-9 T 13-10-2018 IPR004013 PHP domain GO:0003824 Thivi_1152 7b780da9d7b75f2872a5091c7f33b675 293 SMART SM00481 5 70 8.3E-20 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thivi_3702 d02449b05ff058c6b9fa29003ee73fe2 123 SUPERFAMILY SSF47413 2 73 1.97E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_3702 d02449b05ff058c6b9fa29003ee73fe2 123 Pfam PF13560 Helix-turn-helix domain 6 61 7.4E-10 T 13-10-2018 Thivi_3702 d02449b05ff058c6b9fa29003ee73fe2 123 Gene3D G3DSA:1.10.260.40 1 69 1.2E-14 T 13-10-2018 Thivi_3702 d02449b05ff058c6b9fa29003ee73fe2 123 SMART SM00530 10 67 3.3E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_2117 331f08d8e672d293145f85e75f5144c2 131 SUPERFAMILY SSF48619 20 72 2.36E-10 T 13-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_2117 331f08d8e672d293145f85e75f5144c2 131 Gene3D G3DSA:1.20.90.10 17 99 2.5E-16 T 13-10-2018 IPR036444 Phospholipase A2 domain superfamily GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_4439 93e7c0a95869df9aa4824831b3d0aad3 1332 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 173 246 1.4E-24 T 13-10-2018 IPR013491 Caudovirus, tape measure, N-terminal Thivi_0993 3ad41650f6ddc1448cc4768a3c42e233 368 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 88 279 2.1E-42 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Thivi_0993 3ad41650f6ddc1448cc4768a3c42e233 368 SUPERFAMILY SSF53474 77 179 9.58E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0993 3ad41650f6ddc1448cc4768a3c42e233 368 Pfam PF10503 Esterase PHB depolymerase 87 282 9.9E-64 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Thivi_0993 3ad41650f6ddc1448cc4768a3c42e233 368 SUPERFAMILY SSF53474 176 366 1.34E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0993 3ad41650f6ddc1448cc4768a3c42e233 368 Gene3D G3DSA:3.40.50.1820 62 364 2.3E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4473 d2c2cc6937db2c060f7217491e0994e1 118 Gene3D G3DSA:3.10.450.40 56 118 4.8E-9 T 13-10-2018 Thivi_4473 d2c2cc6937db2c060f7217491e0994e1 118 Pfam PF03413 Peptidase propeptide and YPEB domain 56 116 7.7E-10 T 13-10-2018 IPR025711 PepSY domain Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 553 2.0E-41 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 329 3.4E-34 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Gene3D G3DSA:3.40.50.970 1 190 7.6E-57 T 13-10-2018 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 179 5.8E-45 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Gene3D G3DSA:3.40.50.1220 197 362 2.9E-44 T 13-10-2018 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 SUPERFAMILY SSF52518 364 575 2.66E-59 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 Gene3D G3DSA:3.40.50.970 363 577 2.5E-62 T 13-10-2018 Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 SUPERFAMILY SSF52467 163 358 7.16E-45 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 SUPERFAMILY SSF52518 6 187 1.22E-50 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_2146 2fdd7752494a8d0e2d1773d10390cb4a 577 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 7 576 3.6E-173 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Thivi_3796 03cfd62de885ff2197e2915ebfddd7c0 201 Pfam PF14279 HNH endonuclease 99 153 4.2E-16 T 13-10-2018 IPR029471 HNH endonuclease 5 Thivi_3796 03cfd62de885ff2197e2915ebfddd7c0 201 SMART SM00507 86 139 3.3E-12 T 13-10-2018 IPR003615 HNH nuclease Thivi_3796 03cfd62de885ff2197e2915ebfddd7c0 201 Gene3D G3DSA:3.30.40.60 73 167 1.2E-20 T 13-10-2018 Thivi_2369 44fd747bda98bc53b5e328e280208f60 119 Pfam PF13384 Homeodomain-like domain 84 116 3.0E-6 T 13-10-2018 Thivi_2369 44fd747bda98bc53b5e328e280208f60 119 Gene3D G3DSA:1.10.10.60 74 116 7.9E-7 T 13-10-2018 Thivi_1738 7a843700d3558ca3f4d4c1521940d35e 132 Pfam PF01850 PIN domain 4 122 6.2E-15 T 13-10-2018 IPR002716 PIN domain Thivi_1738 7a843700d3558ca3f4d4c1521940d35e 132 Gene3D G3DSA:3.40.50.1010 1 130 9.6E-32 T 13-10-2018 Thivi_1738 7a843700d3558ca3f4d4c1521940d35e 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 128 10.288 T 13-10-2018 IPR022907 VapC family GO:0004540 Thivi_1738 7a843700d3558ca3f4d4c1521940d35e 132 SUPERFAMILY SSF88723 1 130 5.61E-26 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_0136 33cdc61a429a2e03f8278eae2ae0c2d6 462 Gene3D G3DSA:3.40.50.2000 257 438 4.9E-46 T 13-10-2018 Thivi_0136 33cdc61a429a2e03f8278eae2ae0c2d6 462 SUPERFAMILY SSF53756 71 457 1.06E-82 T 13-10-2018 Thivi_0136 33cdc61a429a2e03f8278eae2ae0c2d6 462 Pfam PF13439 Glycosyltransferase Family 4 71 248 2.4E-20 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_0136 33cdc61a429a2e03f8278eae2ae0c2d6 462 Pfam PF00534 Glycosyl transferases group 1 269 432 1.3E-37 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_0136 33cdc61a429a2e03f8278eae2ae0c2d6 462 Gene3D G3DSA:3.40.50.2000 40 256 4.8E-28 T 13-10-2018 Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 206 226 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 Pfam PF04055 Radical SAM superfamily 211 365 9.0E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 Pfam PF02310 B12 binding domain 15 128 3.1E-16 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 Gene3D G3DSA:3.80.30.20 201 398 6.0E-13 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 SMART SM00729 202 406 8.1E-9 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_2260 934ee9e468756a0e1e73c9c541afc0ea 476 SUPERFAMILY SSF102114 164 397 1.24E-23 T 13-10-2018 Thivi_3132 9023db97ef2cfe3a4fb769cf2b6ffba5 227 Pfam PF00005 ABC transporter 28 173 5.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3132 9023db97ef2cfe3a4fb769cf2b6ffba5 227 SMART SM00382 36 222 2.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3132 9023db97ef2cfe3a4fb769cf2b6ffba5 227 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3132 9023db97ef2cfe3a4fb769cf2b6ffba5 227 SUPERFAMILY SSF52540 14 224 2.32E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3132 9023db97ef2cfe3a4fb769cf2b6ffba5 227 Gene3D G3DSA:3.40.50.300 10 225 1.4E-66 T 13-10-2018 Thivi_2864 e0dc32beebdc043005736d0d161549ef 351 Gene3D G3DSA:3.30.450.90 1 99 5.6E-28 T 13-10-2018 Thivi_2864 e0dc32beebdc043005736d0d161549ef 351 Pfam PF00437 Type II/IV secretion system protein 12 271 1.5E-38 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_2864 e0dc32beebdc043005736d0d161549ef 351 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 7.0E-130 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Thivi_2864 e0dc32beebdc043005736d0d161549ef 351 Gene3D G3DSA:3.40.50.300 100 350 1.5E-88 T 13-10-2018 Thivi_2864 e0dc32beebdc043005736d0d161549ef 351 SUPERFAMILY SSF52540 3 335 3.0E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1369 b90e3217fa0862c418a65c8fcc2827c6 433 Pfam PF07613 Protein of unknown function (DUF1576) 263 423 2.5E-54 T 13-10-2018 IPR011470 Protein of unknown function DUF1576 Thivi_1369 b90e3217fa0862c418a65c8fcc2827c6 433 Pfam PF07613 Protein of unknown function (DUF1576) 48 222 1.0E-52 T 13-10-2018 IPR011470 Protein of unknown function DUF1576 Thivi_0391 bd510c1d24d6562aca60c1ab5933f042 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 111 245 1.0E-39 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Thivi_0391 bd510c1d24d6562aca60c1ab5933f042 248 SMART SM00858 123 185 4.3E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Thivi_0391 bd510c1d24d6562aca60c1ab5933f042 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 48 244 1.6E-52 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Thivi_0391 bd510c1d24d6562aca60c1ab5933f042 248 Gene3D G3DSA:2.30.30.760 188 247 2.8E-13 T 13-10-2018 Thivi_3346 91f81325e6268cbba6e03dca7fef3676 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 120 9.7E-13 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Thivi_3346 91f81325e6268cbba6e03dca7fef3676 124 Gene3D G3DSA:3.10.180.10 6 123 2.6E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_3346 91f81325e6268cbba6e03dca7fef3676 124 ProSitePatterns PS00934 Glyoxalase I signature 1. 9 30 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Thivi_3346 91f81325e6268cbba6e03dca7fef3676 124 SUPERFAMILY SSF54593 6 123 2.2E-25 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 Gene3D G3DSA:3.40.50.2300 19 136 4.4E-28 T 13-10-2018 Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 SUPERFAMILY SSF46894 150 243 2.43E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 Gene3D G3DSA:1.10.10.10 137 245 7.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 SMART SM00448 23 133 4.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 SUPERFAMILY SSF52172 17 143 2.7E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 SMART SM00862 169 242 1.3E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 Pfam PF00072 Response regulator receiver domain 25 134 2.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0560 cb84422a24eab31bafaf2dbf2d17acb4 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 242 5.3E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.2E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 SUPERFAMILY SSF51735 10 255 7.02E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 Gene3D G3DSA:3.40.50.720 8 255 1.2E-66 T 13-10-2018 Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.1E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_3268 eec4e0905440ed18ae4ab79d35e3a805 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 254 6.5E-50 T 13-10-2018 Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 SUPERFAMILY SSF52540 1 295 1.2E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 Gene3D G3DSA:3.30.70.20 68 123 2.8E-12 T 13-10-2018 Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 Pfam PF13237 4Fe-4S dicluster domain 67 114 2.7E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 SUPERFAMILY SSF54862 68 129 7.33E-17 T 13-10-2018 Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 269 5.3E-13 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 Gene3D G3DSA:3.40.50.300 124 292 1.0E-17 T 13-10-2018 Thivi_0863 59e4ade885c7539b896dfc6bd23194f7 300 Gene3D G3DSA:3.40.50.300 2 67 7.3E-7 T 13-10-2018 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.924 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Pfam PF00549 CoA-ligase 262 382 5.3E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 SUPERFAMILY SSF52210 240 383 2.49E-52 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Gene3D G3DSA:3.30.470.20 1 234 6.7E-89 T 13-10-2018 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Pfam PF08442 ATP-grasp domain 2 203 3.6E-72 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 SUPERFAMILY SSF56059 1 238 1.14E-74 T 13-10-2018 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 PIRSF PIRSF001554 1 388 1.6E-146 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Gene3D G3DSA:3.40.50.261 240 387 3.9E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.4E-159 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Thivi_3357 a9c8654406cc1c3cf58398c9c3d651ee 398 Gene3D G3DSA:3.30.1490.20 21 104 6.7E-89 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_1790 ff27960accff4742888adf792215dd94 288 Gene3D G3DSA:1.20.5.110 28 100 2.9E-6 T 13-10-2018 Thivi_1790 ff27960accff4742888adf792215dd94 288 SMART SM00028 200 233 37.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1790 ff27960accff4742888adf792215dd94 288 SMART SM00028 163 196 270.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1790 ff27960accff4742888adf792215dd94 288 SMART SM00028 237 270 5.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1790 ff27960accff4742888adf792215dd94 288 Gene3D G3DSA:1.25.40.10 163 285 1.7E-34 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1790 ff27960accff4742888adf792215dd94 288 Pfam PF16331 TolA binding protein trimerisation 30 99 5.0E-19 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 Thivi_1790 ff27960accff4742888adf792215dd94 288 SUPERFAMILY SSF48452 167 281 6.92E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1790 ff27960accff4742888adf792215dd94 288 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 163 280 6.1E-36 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Thivi_1790 ff27960accff4742888adf792215dd94 288 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 3 283 19.345 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Thivi_1790 ff27960accff4742888adf792215dd94 288 Pfam PF13525 Outer membrane lipoprotein 162 283 7.5E-15 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Thivi_2615 06c5cb03330d5265cf6fe9712d6b225d 211 Gene3D G3DSA:3.40.50.10490 9 200 2.2E-61 T 13-10-2018 Thivi_2615 06c5cb03330d5265cf6fe9712d6b225d 211 SUPERFAMILY SSF53697 28 193 7.48E-42 T 13-10-2018 Thivi_2615 06c5cb03330d5265cf6fe9712d6b225d 211 Pfam PF13580 SIS domain 29 153 2.4E-21 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Thivi_3138 f14a02ad0224d8c38c48186a99eec65c 155 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 5 155 1.4E-51 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Thivi_3138 f14a02ad0224d8c38c48186a99eec65c 155 PIRSF PIRSF010312 2 155 7.5E-49 T 13-10-2018 IPR016568 Sulphur oxidation, SoxY Thivi_3138 f14a02ad0224d8c38c48186a99eec65c 155 Gene3D G3DSA:2.60.40.2470 32 155 5.3E-45 T 13-10-2018 IPR038162 Ig-like SoxY domain superfamily Thivi_3138 f14a02ad0224d8c38c48186a99eec65c 155 Pfam PF13501 Sulfur oxidation protein SoxY 52 153 8.3E-34 T 13-10-2018 IPR032711 Ig-like SoxY domain Thivi_1428 b6035ac79d68164a320277415946366d 138 Gene3D G3DSA:3.40.50.1010 1 133 1.4E-32 T 13-10-2018 Thivi_1428 b6035ac79d68164a320277415946366d 138 SUPERFAMILY SSF88723 4 134 1.85E-31 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_1428 b6035ac79d68164a320277415946366d 138 Pfam PF01850 PIN domain 6 126 3.2E-16 T 13-10-2018 IPR002716 PIN domain Thivi_1428 b6035ac79d68164a320277415946366d 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 6 132 11.279 T 13-10-2018 IPR022907 VapC family GO:0004540 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 SMART SM00487 10 426 4.6E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Gene3D G3DSA:4.10.860.10 613 669 4.2E-17 T 13-10-2018 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.0E-18 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 140 5.2E-10 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Gene3D G3DSA:3.40.50.300 415 596 4.8E-49 T 13-10-2018 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 663 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 SUPERFAMILY SSF52540 38 578 2.01E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 SUPERFAMILY SSF46600 616 664 1.1E-12 T 13-10-2018 IPR036876 UVR domain superfamily Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 SUPERFAMILY SSF52540 6 415 2.85E-135 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Gene3D G3DSA:3.40.50.300 269 414 2.3E-53 T 13-10-2018 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 SMART SM00490 460 546 6.1E-21 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Gene3D G3DSA:3.40.50.300 1 244 1.2E-73 T 13-10-2018 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 4 665 43.19 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Pfam PF00271 Helicase conserved C-terminal domain 441 545 1.2E-17 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2618 be9d67acd621dad377e0be5c7da39c83 669 Pfam PF02151 UvrB/uvrC motif 631 664 2.1E-10 T 13-10-2018 IPR001943 UVR domain GO:0005515 Thivi_2339 5d67c044adf15e679b7714563c35093a 143 Gene3D G3DSA:3.40.50.2300 3 141 2.8E-33 T 13-10-2018 Thivi_2339 5d67c044adf15e679b7714563c35093a 143 Pfam PF00072 Response regulator receiver domain 10 126 3.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2339 5d67c044adf15e679b7714563c35093a 143 SUPERFAMILY SSF52172 5 139 2.99E-30 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2339 5d67c044adf15e679b7714563c35093a 143 SMART SM00448 8 128 1.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0051 3128213a30068000e4bacf79159f5f6b 155 Pfam PF05685 Putative restriction endonuclease 25 142 4.9E-13 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_0051 3128213a30068000e4bacf79159f5f6b 155 Gene3D G3DSA:3.90.1570.10 14 146 4.1E-11 T 13-10-2018 Thivi_0051 3128213a30068000e4bacf79159f5f6b 155 SUPERFAMILY SSF52980 18 128 1.93E-15 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3831 7563ab0465fb8c99d602b23f43adc3e6 330 Gene3D G3DSA:1.10.8.350 35 202 1.9E-109 T 13-10-2018 Thivi_3831 7563ab0465fb8c99d602b23f43adc3e6 330 SUPERFAMILY SSF53955 11 325 1.07E-84 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3831 7563ab0465fb8c99d602b23f43adc3e6 330 Gene3D G3DSA:1.10.530.10 69 319 1.9E-109 T 13-10-2018 Thivi_3831 7563ab0465fb8c99d602b23f43adc3e6 330 Pfam PF13406 Transglycosylase SLT domain 27 320 5.2E-98 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 Thivi_3831 7563ab0465fb8c99d602b23f43adc3e6 330 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 31 322 5.1E-111 T 13-10-2018 IPR011757 Lytic transglycosylase MltB Thivi_4132 0696e0e024ffb4ebf5775b58c322f124 325 Pfam PF00583 Acetyltransferase (GNAT) family 90 176 7.9E-5 T 13-10-2018 IPR000182 GNAT domain Thivi_4132 0696e0e024ffb4ebf5775b58c322f124 325 SUPERFAMILY SSF55729 48 183 1.85E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4132 0696e0e024ffb4ebf5775b58c322f124 325 Gene3D G3DSA:3.40.630.30 23 193 3.0E-14 T 13-10-2018 Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 200 211 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 Pfam PF13484 4Fe-4S double cluster binding domain 199 263 2.2E-20 T 13-10-2018 Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 13 322 51.009 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 Pfam PF08331 Domain of unknown function (DUF1730) 68 147 1.4E-23 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 20 355 4.1E-153 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Thivi_4564 65066d8279998a2328aa849c4ba98a97 358 SUPERFAMILY SSF46548 146 263 7.32E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0670 5dc6fdb679a113b01879e2bc7da8bbb0 142 Gene3D G3DSA:1.20.1220.20 1 142 7.1E-34 T 13-10-2018 Thivi_0670 5dc6fdb679a113b01879e2bc7da8bbb0 142 Pfam PF01724 Domain of unknown function DUF29 3 140 9.6E-47 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_4325 2ea78dc234b0661dd91598a07f049264 155 SMART SM01118 2 149 3.2E-22 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Thivi_4325 2ea78dc234b0661dd91598a07f049264 155 PIRSF PIRSF016487 1 155 1.8E-58 T 13-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like Thivi_4325 2ea78dc234b0661dd91598a07f049264 155 Gene3D G3DSA:2.40.320.10 1 151 4.3E-47 T 13-10-2018 Thivi_4325 2ea78dc234b0661dd91598a07f049264 155 SUPERFAMILY SSF55154 1 149 4.74E-41 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Thivi_4325 2ea78dc234b0661dd91598a07f049264 155 Pfam PF01928 CYTH domain 3 142 2.9E-11 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Thivi_1403 7df61f5e4306c4f65b0f89dc5d246f0a 331 SUPERFAMILY SSF56601 18 320 2.35E-103 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_1403 7df61f5e4306c4f65b0f89dc5d246f0a 331 TIGRFAM TIGR03814 Gln_ase: glutaminase A 22 320 4.2E-101 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Thivi_1403 7df61f5e4306c4f65b0f89dc5d246f0a 331 Gene3D G3DSA:3.40.710.10 15 322 2.2E-108 T 13-10-2018 Thivi_1403 7df61f5e4306c4f65b0f89dc5d246f0a 331 Hamap MF_00313 Glutaminase [glsA]. 15 320 40.037 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Thivi_1403 7df61f5e4306c4f65b0f89dc5d246f0a 331 Pfam PF04960 Glutaminase 36 320 5.2E-102 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Thivi_2215 53f13342d6ad54f482e416af0f7f3bd7 389 Pfam PF11814 Peptidase_C39 like family 175 379 3.2E-86 T 13-10-2018 IPR021770 Protein of unknown function DUF3335 Thivi_2215 53f13342d6ad54f482e416af0f7f3bd7 389 SUPERFAMILY SSF55729 18 164 3.66E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_2215 53f13342d6ad54f482e416af0f7f3bd7 389 Gene3D G3DSA:3.90.70.10 228 368 1.2E-5 T 13-10-2018 Thivi_2215 53f13342d6ad54f482e416af0f7f3bd7 389 Pfam PF13673 Acetyltransferase (GNAT) domain 38 163 1.6E-11 T 13-10-2018 IPR000182 GNAT domain Thivi_2215 53f13342d6ad54f482e416af0f7f3bd7 389 Gene3D G3DSA:3.40.630.30 20 166 4.9E-29 T 13-10-2018 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SMART SM00086 565 607 1.0E-6 T 13-10-2018 IPR001610 PAC motif Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SMART SM00086 443 485 1.4E-12 T 13-10-2018 IPR001610 PAC motif Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Pfam PF08447 PAS fold 395 478 6.0E-17 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SUPERFAMILY SSF55785 499 605 1.5E-26 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Gene3D G3DSA:3.30.450.20 37 182 2.0E-14 T 13-10-2018 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 614 780 1.7E-40 T 13-10-2018 IPR000160 GGDEF domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Gene3D G3DSA:3.30.450.20 478 602 7.3E-35 T 13-10-2018 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SMART SM00267 607 780 3.2E-60 T 13-10-2018 IPR000160 GGDEF domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SUPERFAMILY SSF55073 623 782 6.59E-48 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Gene3D G3DSA:3.30.70.270 620 785 1.7E-55 T 13-10-2018 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Gene3D G3DSA:3.30.450.20 364 477 1.0E-30 T 13-10-2018 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SUPERFAMILY SSF55785 359 483 5.32E-28 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 490 614 2.9E-17 T 13-10-2018 IPR000014 PAS domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 492 9.9E-19 T 13-10-2018 IPR000014 PAS domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Pfam PF02743 Cache domain 46 270 3.1E-15 T 13-10-2018 IPR033479 Double Cache domain 1 Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Pfam PF13426 PAS domain 504 606 6.4E-15 T 13-10-2018 IPR000014 PAS domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 776 4.8E-47 T 13-10-2018 IPR000160 GGDEF domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SMART SM00091 371 437 1.7E-6 T 13-10-2018 IPR000014 PAS domain Thivi_1250 e4a2acfaf51a5f423b793c59d6a1e578 785 SMART SM00091 493 560 8.7E-5 T 13-10-2018 IPR000014 PAS domain Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 513 666 7.2E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 Gene3D G3DSA:3.30.450.20 91 237 6.3E-38 T 13-10-2018 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 Gene3D G3DSA:1.10.287.950 370 701 1.9E-67 T 13-10-2018 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 SMART SM00283 440 701 9.1E-62 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 Gene3D G3DSA:3.30.450.20 238 331 6.3E-38 T 13-10-2018 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 SMART SM00304 371 425 1.6E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 SUPERFAMILY SSF58104 393 701 9.02E-67 T 13-10-2018 Thivi_0036 b9053e8165cc56c2eb8008d24d28ecec 702 Pfam PF02743 Cache domain 48 320 2.7E-23 T 13-10-2018 IPR033479 Double Cache domain 1 Thivi_0326 934e31a00f06b071ddca38fbabd96b7b 138 Gene3D G3DSA:3.40.50.12740 1 132 2.5E-34 T 13-10-2018 Thivi_0326 934e31a00f06b071ddca38fbabd96b7b 138 Pfam PF00072 Response regulator receiver domain 4 114 7.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0326 934e31a00f06b071ddca38fbabd96b7b 138 SUPERFAMILY SSF52172 1 122 1.21E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0326 934e31a00f06b071ddca38fbabd96b7b 138 SMART SM00448 2 114 2.3E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 SUPERFAMILY SSF51230 78 153 1.31E-24 T 13-10-2018 IPR011053 Single hybrid motif Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 3 153 5.1E-52 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.7E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.7E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.7E-17 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 Pfam PF00364 Biotin-requiring enzyme 80 152 1.1E-22 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_1100 9a782a5143583915707c8d4b21453a0d 153 Gene3D G3DSA:2.40.50.100 75 153 1.7E-31 T 13-10-2018 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 PIRSF PIRSF005784 1 178 4.8E-56 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 Pfam PF04060 Putative Fe-S cluster 41 73 1.9E-11 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 Gene3D G3DSA:3.30.70.20 82 167 5.0E-17 T 13-10-2018 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 SUPERFAMILY SSF54862 39 169 4.45E-26 T 13-10-2018 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 2 175 8.8E-56 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 Gene3D G3DSA:1.10.15.40 33 81 4.0E-8 T 13-10-2018 Thivi_0072 568510b5f707808f1bd67b4ae43127ef 178 Pfam PF14697 4Fe-4S dicluster domain 103 157 7.3E-13 T 13-10-2018 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 Gene3D G3DSA:3.40.50.10490 3 211 1.5E-88 T 13-10-2018 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 153 170 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 82 99 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 32 41 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 1 19 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 170 181 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 PRINTS PR00395 Ribosomal protein S2 signature 191 205 2.8E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 Gene3D G3DSA:1.10.287.610 98 145 1.5E-88 T 13-10-2018 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 220 39.454 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 1 12 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 SUPERFAMILY SSF52313 1 228 1.19E-93 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 220 4.0E-100 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 153 177 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Thivi_2745 032e00b75e44b568b08e2ea7af83c19d 249 Pfam PF00318 Ribosomal protein S2 4 219 6.1E-93 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0162 58e978708350be71c092d497ea0a116d 199 SMART SM00867 31 196 1.1E-68 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thivi_0162 58e978708350be71c092d497ea0a116d 199 SUPERFAMILY SSF101874 28 198 1.16E-53 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Thivi_0162 58e978708350be71c092d497ea0a116d 199 Pfam PF04264 YceI-like domain 32 194 1.5E-38 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thivi_0162 58e978708350be71c092d497ea0a116d 199 Gene3D G3DSA:2.40.128.110 30 199 5.8E-52 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Thivi_0750 925f43026728d97ef3ba46c731f180c4 97 Gene3D G3DSA:2.60.120.10 1 92 2.9E-31 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0750 925f43026728d97ef3ba46c731f180c4 97 SUPERFAMILY SSF51182 24 91 4.57E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_0750 925f43026728d97ef3ba46c731f180c4 97 Pfam PF05899 Protein of unknown function (DUF861) 23 90 3.8E-25 T 13-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Thivi_1824 a24fcd0ab739e410d3ec94b064a6e0a3 210 Gene3D G3DSA:3.60.15.10 1 210 9.1E-78 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1824 a24fcd0ab739e410d3ec94b064a6e0a3 210 SMART SM00849 12 192 1.9E-35 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_1824 a24fcd0ab739e410d3ec94b064a6e0a3 210 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 5.2E-30 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_1824 a24fcd0ab739e410d3ec94b064a6e0a3 210 SUPERFAMILY SSF56281 4 209 1.21E-56 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 Pfam PF03861 ANTAR domain 132 184 1.7E-14 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 PIRSF PIRSF036382 1 190 1.2E-36 T 13-10-2018 IPR008327 Signal transduction response regulator, antiterminator Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 Pfam PF00072 Response regulator receiver domain 7 108 2.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 Gene3D G3DSA:3.40.50.2300 1 134 1.2E-32 T 13-10-2018 Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 SMART SM00448 4 113 9.3E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 SMART SM01012 129 184 2.4E-13 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 Gene3D G3DSA:1.10.10.10 135 190 1.4E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_2442 0eb314452b4c6ea5b0c2c39f97f97a10 223 SUPERFAMILY SSF52172 2 183 1.85E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 Gene3D G3DSA:3.30.390.30 337 448 3.9E-45 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 448 2.1E-172 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-34 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.8E-34 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.8E-34 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.8E-34 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.8E-34 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 Gene3D G3DSA:3.50.50.60 143 260 3.7E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PIRSF PIRSF000350 1 446 5.5E-80 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 2.8E-72 T 13-10-2018 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 SUPERFAMILY SSF51905 1 364 2.22E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 4.3E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 Gene3D G3DSA:3.50.50.60 5 321 3.7E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 SUPERFAMILY SSF55424 335 449 9.11E-32 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_4578 1d1d040cdb257cbbcfa0fa0fccb6d816 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 1.3E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_4621 d495a14153eb596009cb8b070b808285 442 Pfam PF00589 Phage integrase family 247 403 1.3E-13 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_4621 d495a14153eb596009cb8b070b808285 442 SUPERFAMILY SSF56349 174 411 3.53E-32 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_4621 d495a14153eb596009cb8b070b808285 442 Pfam PF13356 Arm DNA-binding domain 6 93 1.5E-13 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Thivi_4621 d495a14153eb596009cb8b070b808285 442 Gene3D G3DSA:1.10.443.10 244 413 5.3E-22 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_4621 d495a14153eb596009cb8b070b808285 442 Gene3D G3DSA:3.30.160.390 5 113 4.0E-11 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Thivi_3536 7ac93787a35752fb4b83d197080018cf 207 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 58 200 9.4E-10 T 13-10-2018 Thivi_3536 7ac93787a35752fb4b83d197080018cf 207 SUPERFAMILY SSF49899 19 204 2.94E-16 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Thivi_3536 7ac93787a35752fb4b83d197080018cf 207 Gene3D G3DSA:2.60.120.200 28 203 1.6E-12 T 13-10-2018 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 Pfam PF01564 Spermine/spermidine synthase domain 63 242 4.3E-46 T 13-10-2018 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 SUPERFAMILY SSF53335 6 280 5.55E-76 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 Gene3D G3DSA:3.40.50.150 58 286 9.6E-62 T 13-10-2018 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 TIGRFAM TIGR00417 speE: spermidine synthase 7 277 5.0E-80 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 Pfam PF17284 Spermidine synthase tetramerisation domain 7 57 3.6E-13 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 Gene3D G3DSA:2.30.140.10 4 57 3.3E-19 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Thivi_3471 8a66a8680ad2d8d4070c36b20a0b9ae7 290 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 283 36.244 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 Pfam PF00977 Histidine biosynthesis protein 225 513 3.7E-50 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 PIRSF PIRSF036936 1 531 9.3E-246 T 13-10-2018 IPR014640 Imidazole glycerol phosphate synthase HisHF GO:0000105|GO:0000107|GO:0016763|GO:0016833 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 201 34.746 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 199 4.2E-60 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 Pfam PF00117 Glutamine amidotransferase class-I 4 198 6.8E-16 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 222 530 6.4E-96 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 Gene3D G3DSA:3.40.50.880 1 205 4.9E-72 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 SUPERFAMILY SSF52317 2 200 1.33E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 SUPERFAMILY SSF51366 223 530 8.63E-69 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_3177 8c4a4dbdf0c7b2e592a1e5de7276b161 531 Gene3D G3DSA:3.20.20.70 224 531 2.9E-144 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 Gene3D G3DSA:1.20.120.220 102 288 2.3E-53 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 218 227 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 45 282 1.3E-43 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 SUPERFAMILY SSF81336 104 282 1.57E-39 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 Pfam PF00119 ATP synthase A chain 52 281 1.1E-53 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2598 5d3bf5dd456cec12bceda50828b8a5dd 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 288 15.271 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_3072 eb226f0958d9e92cc98779f13d9175a4 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 36.539 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3072 eb226f0958d9e92cc98779f13d9175a4 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 157 2.6E-58 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3072 eb226f0958d9e92cc98779f13d9175a4 180 Gene3D G3DSA:3.30.1060.10 1 167 4.2E-69 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3072 eb226f0958d9e92cc98779f13d9175a4 180 SUPERFAMILY SSF55068 3 169 1.31E-72 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_3072 eb226f0958d9e92cc98779f13d9175a4 180 Pfam PF01625 Peptide methionine sulfoxide reductase 6 158 6.4E-63 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Thivi_0903 564e0043f540c7428c344fc4e19573c5 474 SUPERFAMILY SSF161098 250 449 9.27E-17 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0903 564e0043f540c7428c344fc4e19573c5 474 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 268 471 4.9E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0903 564e0043f540c7428c344fc4e19573c5 474 Gene3D G3DSA:1.10.3720.10 240 467 8.9E-19 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_2164 99e5a5c05e89cbd7baf7ad0308bd9b80 192 Pfam PF02342 TerD domain 1 187 7.5E-83 T 13-10-2018 IPR003325 TerD domain Thivi_2164 99e5a5c05e89cbd7baf7ad0308bd9b80 192 Gene3D G3DSA:2.60.60.30 19 186 1.1E-72 T 13-10-2018 Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 Gene3D G3DSA:1.10.10.10 14 79 2.8E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 SUPERFAMILY SSF48008 85 222 1.54E-28 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 Pfam PF07729 FCD domain 89 215 8.5E-27 T 13-10-2018 IPR011711 GntR, C-terminal Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 SMART SM00895 89 216 5.7E-26 T 13-10-2018 IPR011711 GntR, C-terminal Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 Gene3D G3DSA:1.20.120.530 83 226 9.0E-34 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 1.7E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 SMART SM00345 21 79 9.0E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Thivi_3239 3dd092005e94e7211f97354fd07e60ba 230 SUPERFAMILY SSF46785 16 108 1.5E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4139 dc59b0fd3ed0569fa0dfd7399afbee5f 509 SUPERFAMILY SSF111283 51 507 3.14E-111 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_4139 dc59b0fd3ed0569fa0dfd7399afbee5f 509 PIRSF PIRSF004919 47 508 2.0E-118 T 13-10-2018 IPR025502 TldD Thivi_4139 dc59b0fd3ed0569fa0dfd7399afbee5f 509 Pfam PF01523 Putative modulator of DNA gyrase 66 358 4.8E-59 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_4139 dc59b0fd3ed0569fa0dfd7399afbee5f 509 Gene3D G3DSA:3.30.2290.10 47 249 6.1E-18 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_1264 b659cce17822b7d23dd63fba37e32661 304 Pfam PF01136 Peptidase family U32 121 268 9.4E-13 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Thivi_2020 067d43c5d05d073708267e2c84256841 289 SMART SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. 18 289 3.8E-6 T 13-10-2018 IPR020803 Polyketide synthase, methyltransferase domain Thivi_2020 067d43c5d05d073708267e2c84256841 289 Gene3D G3DSA:3.40.50.150 38 283 1.6E-41 T 13-10-2018 Thivi_2020 067d43c5d05d073708267e2c84256841 289 Pfam PF08241 Methyltransferase domain 75 173 1.7E-17 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_2020 067d43c5d05d073708267e2c84256841 289 SUPERFAMILY SSF53335 41 283 1.56E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 Pfam PF00374 Nickel-dependent hydrogenase 43 111 1.2E-10 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 SUPERFAMILY SSF56762 15 360 1.14E-107 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 43 68 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 Gene3D G3DSA:1.10.645.20 5 360 5.4E-125 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 286 360 6.5E-16 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0498 5dde8d3ec1d317ffa8b16f1fae69ffa8 360 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 282 5.2E-48 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.8E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.287 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 Gene3D G3DSA:4.10.520.10 1 98 7.3E-38 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 SMART SM00411 3 92 8.4E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 5.9E-52 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.0E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_1559 913997c94f3dcc1dcb6b5963fcef6246 99 SUPERFAMILY SSF47729 3 92 4.27E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_1477 0a886b31601806e7fb7963d9915b9ccb 131 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 13 120 9.6E-16 T 13-10-2018 IPR006440 Death on curing protein GO:0016301 Thivi_1477 0a886b31601806e7fb7963d9915b9ccb 131 PIRSF PIRSF018297 3 128 3.4E-44 T 13-10-2018 IPR006440 Death on curing protein GO:0016301 Thivi_1477 0a886b31601806e7fb7963d9915b9ccb 131 SUPERFAMILY SSF140931 8 95 3.92E-10 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_1477 0a886b31601806e7fb7963d9915b9ccb 131 Gene3D G3DSA:1.20.120.1870 6 130 1.3E-39 T 13-10-2018 Thivi_1477 0a886b31601806e7fb7963d9915b9ccb 131 Pfam PF02661 Fic/DOC family 8 86 6.2E-15 T 13-10-2018 IPR003812 Fido domain Thivi_0456 f42ea753163eee4402b76f93603a950b 917 Gene3D G3DSA:1.10.3210.30 1 268 5.5E-56 T 13-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Thivi_0456 f42ea753163eee4402b76f93603a950b 917 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 27 221 2.0E-22 T 13-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Thivi_0456 f42ea753163eee4402b76f93603a950b 917 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 296 669 3.0E-51 T 13-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Thivi_0456 f42ea753163eee4402b76f93603a950b 917 Gene3D G3DSA:3.40.50.300 269 499 1.4E-6 T 13-10-2018 Thivi_0456 f42ea753163eee4402b76f93603a950b 917 SUPERFAMILY SSF52540 292 667 1.01E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 SUPERFAMILY SSF53098 223 313 9.86E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 Pfam PF13551 Winged helix-turn helix 29 86 4.3E-9 T 13-10-2018 Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 Pfam PF13358 DDE superfamily endonuclease 169 310 2.0E-30 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 Gene3D G3DSA:3.30.420.470 133 332 2.4E-17 T 13-10-2018 Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 Pfam PF13592 Winged helix-turn helix 98 156 3.2E-17 T 13-10-2018 IPR025959 Winged helix-turn helix domain Thivi_1494 9b1691a7543df76fcc90aabc637f2a98 341 SUPERFAMILY SSF46689 15 129 1.16E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 Gene3D G3DSA:1.10.645.20 4 418 7.2E-173 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 418 1.5E-124 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 418 49.923 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 SUPERFAMILY SSF56762 16 418 1.23E-137 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3915 675256d4b811a4c0358875f0cce25d19 418 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 418 2.6E-180 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 Gene3D G3DSA:1.10.3860.10 2 427 1.8E-74 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 3.7E-17 T 13-10-2018 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 Pfam PF00375 Sodium:dicarboxylate symporter family 12 414 3.7E-56 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Thivi_4096 e18e598fa56c36767d3707f484f446a8 429 SUPERFAMILY SSF118215 12 416 8.24E-60 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_0419 587e862f345203bd094a48ede61c1c1e 790 Pfam PF11067 Protein of unknown function (DUF2868) 203 773 2.1E-77 T 13-10-2018 IPR021296 Protein of unknown function DUF2868 Thivi_0480 027eba8d8d2389e08f7c832023437530 184 SMART SM00463 89 173 2.5E-13 T 13-10-2018 IPR002625 Smr domain Thivi_0480 027eba8d8d2389e08f7c832023437530 184 Pfam PF01713 Smr domain 92 173 2.1E-24 T 13-10-2018 IPR002625 Smr domain Thivi_0480 027eba8d8d2389e08f7c832023437530 184 SUPERFAMILY SSF160443 91 173 2.09E-18 T 13-10-2018 IPR036063 Smr domain superfamily Thivi_0480 027eba8d8d2389e08f7c832023437530 184 Gene3D G3DSA:3.30.1370.110 47 179 1.1E-41 T 13-10-2018 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Gene3D G3DSA:3.30.1390.30 84 159 5.3E-46 T 13-10-2018 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 609 3.0E-231 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Gene3D G3DSA:3.40.710.10 244 612 1.1E-100 T 13-10-2018 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 605 7.7E-72 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 SUPERFAMILY SSF56519 55 247 2.49E-47 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Gene3D G3DSA:3.90.1310.10 63 243 5.3E-46 T 13-10-2018 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 SUPERFAMILY SSF56601 249 609 2.62E-100 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 2 612 51.565 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3829 0a556fd866dcca4aedd322d2fa0b641d 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 234 8.5E-41 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 Pfam PF02576 RimP N-terminal domain 12 84 3.9E-26 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 Gene3D G3DSA:3.30.300.70 1 81 1.8E-23 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 SUPERFAMILY SSF75420 4 84 4.45E-24 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 Pfam PF17384 RimP C-terminal SH3 domain 89 152 7.5E-15 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 152 26.165 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Thivi_3166 fc455164af472ffd3e2fe36dd1b234fa 164 SUPERFAMILY SSF74942 85 152 1.14E-16 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.5E-44 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 SMART SM00878 337 442 3.0E-62 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 SUPERFAMILY SSF56059 83 344 1.34E-67 T 13-10-2018 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Pfam PF02785 Biotin carboxylase C-terminal domain 337 442 1.6E-38 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Gene3D G3DSA:3.30.1490.20 131 204 2.8E-153 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 2.1E-231 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 SUPERFAMILY SSF51246 332 445 3.14E-42 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Gene3D G3DSA:3.40.50.20 1 85 1.3E-34 T 13-10-2018 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.3E-82 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 SUPERFAMILY SSF52440 1 113 1.8E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 Gene3D G3DSA:3.30.470.20 87 433 2.8E-153 T 13-10-2018 Thivi_1101 9653ed9ef4c43b188f522c265e8723b8 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Pfam PF14561 Tetratricopeptide repeat 201 287 1.4E-24 T 13-10-2018 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 TIGRFAM TIGR01068 thioredoxin: thioredoxin 11 111 7.9E-31 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Gene3D G3DSA:1.25.40.10 115 198 1.9E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 SUPERFAMILY SSF48452 112 252 2.69E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Gene3D G3DSA:3.40.30.10 2 114 8.2E-33 T 13-10-2018 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Pfam PF00085 Thioredoxin 7 111 4.8E-28 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Gene3D G3DSA:1.25.40.10 200 287 1.9E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 PRINTS PR00421 Thioredoxin family signature 36 45 7.2E-7 T 13-10-2018 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 PRINTS PR00421 Thioredoxin family signature 76 87 7.2E-7 T 13-10-2018 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 PRINTS PR00421 Thioredoxin family signature 28 36 7.2E-7 T 13-10-2018 Thivi_0836 7970409644c1bfc78629237ac3be2611 287 SUPERFAMILY SSF52833 4 113 3.57E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0836 7970409644c1bfc78629237ac3be2611 287 Pfam PF14559 Tetratricopeptide repeat 127 193 3.7E-8 T 13-10-2018 Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Pfam PF01464 Transglycosylase SLT domain 184 282 2.7E-25 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 SMART SM00257 428 472 5.4E-9 T 13-10-2018 IPR018392 LysM domain Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 SMART SM00257 485 528 1.7E-10 T 13-10-2018 IPR018392 LysM domain Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 SUPERFAMILY SSF54106 428 472 7.85E-10 T 13-10-2018 Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 191 219 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Gene3D G3DSA:3.10.350.10 423 482 5.3E-14 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Gene3D G3DSA:1.10.530.10 166 320 6.0E-36 T 13-10-2018 Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Gene3D G3DSA:3.10.350.10 483 530 4.3E-14 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Pfam PF01476 LysM domain 486 527 8.8E-10 T 13-10-2018 IPR018392 LysM domain Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 Pfam PF01476 LysM domain 429 472 1.8E-10 T 13-10-2018 IPR018392 LysM domain Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 SUPERFAMILY SSF53955 170 314 5.51E-43 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3964 b929ea36587276b2b04545cb0d8130bb 530 SUPERFAMILY SSF54106 484 528 6.41E-11 T 13-10-2018 Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 Gene3D G3DSA:3.50.50.60 29 276 8.5E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 285 354 1.6E-25 T 13-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 SUPERFAMILY SSF51905 31 280 7.11E-12 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 Gene3D G3DSA:3.50.50.60 72 211 8.5E-77 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 Gene3D G3DSA:3.90.760.10 283 355 8.8E-28 T 13-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 SUPERFAMILY SSF55424 284 355 3.3E-20 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_1812 84876437fe1ab3e7f7c27a100b7485fa 356 SUPERFAMILY SSF51905 76 211 4.21E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 SUPERFAMILY SSF47384 260 345 1.28E-18 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 387 495 7.5E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 Pfam PF07694 5TMR of 5TMR-LYT 43 198 3.8E-22 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 344 1.7E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 SUPERFAMILY SSF55874 334 496 7.6E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 8.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 8.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 8.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 8.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 Gene3D G3DSA:3.30.565.10 348 501 2.0E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 Gene3D G3DSA:1.10.287.130 242 342 9.3E-20 T 13-10-2018 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 SMART SM00388 277 345 1.3E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_2110 e9c23ff82c6ba8eb5a067184b9c32668 504 SMART SM00387 387 499 3.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 SUPERFAMILY SSF52440 1 112 2.81E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 SUPERFAMILY SSF56059 82 347 9.37E-67 T 13-10-2018 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 1.3E-75 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 SUPERFAMILY SSF51246 330 447 2.51E-43 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 2.4E-43 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 Gene3D G3DSA:3.30.470.130 1 449 6.9E-191 T 13-10-2018 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 SMART SM00878 335 441 5.9E-61 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_0050 888ccf7a28f9784f59cf05d0562e190f 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 3.4E-40 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 SUPERFAMILY SSF46894 133 233 3.4E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 Pfam PF00072 Response regulator receiver domain 8 117 3.1E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 SMART SM00448 6 116 9.8E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 SMART SM00862 156 232 2.9E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 Gene3D G3DSA:1.10.10.10 126 236 4.0E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 Gene3D G3DSA:3.40.50.2300 1 125 1.8E-35 T 13-10-2018 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.3E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_3692 1b18e18fd72dc27c5d489e3588ffcde4 238 SUPERFAMILY SSF52172 3 131 1.32E-42 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82693 545 645 8.89E-9 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Pfam PF00873 AcrB/AcrD/AcrF family 5 1002 7.9E-232 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82714 695 783 1.31E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82866 289 488 1.83E-46 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82866 781 1003 2.62E-45 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82714 183 263 7.06E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82693 138 320 3.92E-11 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.70.1430 546 645 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:1.20.1640.10 10 498 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.70.1430 40 792 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 SUPERFAMILY SSF82693 40 132 9.55E-21 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.2090.10 694 784 1.4E-279 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:1.20.1640.10 499 999 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 531 548 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 6.7E-55 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.70.1320 134 324 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.70.1440 646 841 1.4E-279 T 13-10-2018 Thivi_0707 b99a9294f21b04ea6ea97d5a8f1e1ca6 1030 Gene3D G3DSA:3.30.2090.10 178 268 1.4E-279 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 SUPERFAMILY SSF51735 132 285 9.17E-14 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 Gene3D G3DSA:3.40.50.720 141 264 5.3E-20 T 13-10-2018 Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 Gene3D G3DSA:3.90.180.10 8 101 1.2E-9 T 13-10-2018 Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 TIGRFAM TIGR01202 bchC: chlorophyll synthesis pathway protein BchC 11 317 1.6E-135 T 13-10-2018 IPR005903 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase GO:0016491|GO:0030494|GO:0036354|GO:0055114 Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 SUPERFAMILY SSF50129 11 161 5.93E-23 T 13-10-2018 IPR011032 GroES-like superfamily Thivi_2012 418e793f8d9f1905f667c5f4425a9eeb 322 Gene3D G3DSA:3.90.180.10 107 306 5.3E-20 T 13-10-2018 Thivi_2089 6206e705313ffe60dab9c25a656d62c3 269 Pfam PF00005 ABC transporter 44 199 2.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2089 6206e705313ffe60dab9c25a656d62c3 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 247 268 8.6E-10 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Thivi_2089 6206e705313ffe60dab9c25a656d62c3 269 SUPERFAMILY SSF52540 28 267 1.92E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2089 6206e705313ffe60dab9c25a656d62c3 269 Gene3D G3DSA:3.40.50.300 24 269 9.9E-53 T 13-10-2018 Thivi_2089 6206e705313ffe60dab9c25a656d62c3 269 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 28 269 3.9E-119 T 13-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD Thivi_2413 ddb18113ff8afff307d6e4cf3ed7ed4b 303 Gene3D G3DSA:1.10.357.140 21 175 1.4E-12 T 13-10-2018 Thivi_2413 ddb18113ff8afff307d6e4cf3ed7ed4b 303 Pfam PF01040 UbiA prenyltransferase family 34 268 7.1E-37 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Thivi_2413 ddb18113ff8afff307d6e4cf3ed7ed4b 303 TIGRFAM TIGR01476 chlor_syn_BchG: bacteriochlorophyll/chlorophyll synthetase 19 297 8.6E-98 T 13-10-2018 IPR006372 Bacteriochlorophyll/chlorophyll synthetase Thivi_3112 f0605fab8dfb67e8cd9eda377dd4493f 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3112 f0605fab8dfb67e8cd9eda377dd4493f 208 Pfam PF13183 4Fe-4S dicluster domain 31 90 1.9E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3112 f0605fab8dfb67e8cd9eda377dd4493f 208 SUPERFAMILY SSF46548 25 105 1.74E-14 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3112 f0605fab8dfb67e8cd9eda377dd4493f 208 Gene3D G3DSA:1.10.1060.10 6 107 5.6E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1877 a07d476fc621ef0998aaf4e8b925707e 117 Gene3D G3DSA:3.10.129.10 1 117 5.3E-31 T 13-10-2018 Thivi_1877 a07d476fc621ef0998aaf4e8b925707e 117 SUPERFAMILY SSF54637 3 116 1.04E-30 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_1877 a07d476fc621ef0998aaf4e8b925707e 117 Pfam PF03061 Thioesterase superfamily 15 92 8.4E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Thivi_1018 628f9938a1cfc299bb5639eb154bc704 279 Pfam PF13614 AAA domain 18 177 4.8E-19 T 13-10-2018 IPR025669 AAA domain Thivi_1018 628f9938a1cfc299bb5639eb154bc704 279 SUPERFAMILY SSF52540 15 259 3.94E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1018 628f9938a1cfc299bb5639eb154bc704 279 PIRSF PIRSF003092 9 278 6.4E-72 T 13-10-2018 IPR025501 ATP binding protein MinD Thivi_1018 628f9938a1cfc299bb5639eb154bc704 279 Gene3D G3DSA:3.40.50.300 17 258 1.9E-56 T 13-10-2018 Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 Pfam PF13545 Crp-like helix-turn-helix domain 157 228 2.0E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 SUPERFAMILY SSF46785 155 228 7.04E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 SUPERFAMILY SSF51206 12 152 3.4E-22 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 Gene3D G3DSA:1.10.10.10 151 229 3.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 Pfam PF00027 Cyclic nucleotide-binding domain 37 122 1.3E-8 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 SMART SM00419 174 222 2.5E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_0704 1a81ae9d06ae3bc1359952c1fa7f4dbc 229 Gene3D G3DSA:2.60.120.10 9 150 1.1E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_2533 0c671e2bf4f5653961ebaa1460bc5be7 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 234 6.5E-77 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Thivi_2533 0c671e2bf4f5653961ebaa1460bc5be7 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.805 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Thivi_2533 0c671e2bf4f5653961ebaa1460bc5be7 247 Gene3D G3DSA:3.20.20.70 1 240 1.4E-84 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2533 0c671e2bf4f5653961ebaa1460bc5be7 247 Pfam PF00977 Histidine biosynthesis protein 3 231 3.8E-77 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Thivi_2533 0c671e2bf4f5653961ebaa1460bc5be7 247 SUPERFAMILY SSF51366 3 235 5.34E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_2280 30162070abaf80a73a2484196f0a051c 574 Gene3D G3DSA:3.30.70.1450 405 483 1.9E-5 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Thivi_2280 30162070abaf80a73a2484196f0a051c 574 SUPERFAMILY SSF56176 498 570 4.16E-7 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2280 30162070abaf80a73a2484196f0a051c 574 SMART SM01091 493 572 1.6E-6 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2280 30162070abaf80a73a2484196f0a051c 574 Pfam PF03471 Transporter associated domain 497 570 2.2E-7 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2280 30162070abaf80a73a2484196f0a051c 574 Pfam PF00999 Sodium/hydrogen exchanger family 13 386 2.8E-58 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Thivi_2280 30162070abaf80a73a2484196f0a051c 574 Gene3D G3DSA:1.20.1530.20 4 391 1.1E-23 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Thivi_0649 0082a186a367dd52cc321ef1d3b13787 117 SMART SM00073 12 111 1.6E-5 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_0649 0082a186a367dd52cc321ef1d3b13787 117 Gene3D G3DSA:1.20.120.160 1 110 2.2E-27 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0649 0082a186a367dd52cc321ef1d3b13787 117 SUPERFAMILY SSF47226 1 109 1.16E-25 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_0649 0082a186a367dd52cc321ef1d3b13787 117 Pfam PF01627 Hpt domain 26 99 8.4E-14 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Thivi_3798 eb1cb99065ee28f53020bffe8bbc2030 186 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 14 95 3.2E-10 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_3798 eb1cb99065ee28f53020bffe8bbc2030 186 SMART SM00855 13 127 0.0069 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_3798 eb1cb99065ee28f53020bffe8bbc2030 186 SUPERFAMILY SSF53254 10 159 3.0E-31 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_3798 eb1cb99065ee28f53020bffe8bbc2030 186 Gene3D G3DSA:3.40.50.1240 9 177 2.6E-46 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_2585 e6745eda446996502ed1b93d1076bb31 293 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_2585 e6745eda446996502ed1b93d1076bb31 293 SMART SM00382 29 204 2.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2585 e6745eda446996502ed1b93d1076bb31 293 Gene3D G3DSA:3.40.50.300 1 224 3.2E-66 T 13-10-2018 Thivi_2585 e6745eda446996502ed1b93d1076bb31 293 SUPERFAMILY SSF52540 3 217 5.64E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2585 e6745eda446996502ed1b93d1076bb31 293 Pfam PF00005 ABC transporter 21 155 5.1E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3810 b3d62ff2f01b7d3e93122fdd4f0a85f7 573 Gene3D G3DSA:1.20.1730.10 53 542 2.8E-59 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_3810 b3d62ff2f01b7d3e93122fdd4f0a85f7 573 Pfam PF00474 Sodium:solute symporter family 66 486 3.8E-115 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_3810 b3d62ff2f01b7d3e93122fdd4f0a85f7 573 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 181 206 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site Thivi_3810 b3d62ff2f01b7d3e93122fdd4f0a85f7 573 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 66 486 2.0E-64 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Gene3D G3DSA:3.40.50.300 218 390 7.7E-37 T 13-10-2018 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 31 380 1.2E-145 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Hamap MF_00900 GTPase HflX [hflX]. 47 411 47.617 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 288 306 1.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 241 1.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 SUPERFAMILY SSF52540 219 381 7.31E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 PIRSF PIRSF006809 24 442 1.3E-137 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Gene3D G3DSA:3.40.50.11060 40 159 3.4E-33 T 13-10-2018 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Pfam PF13167 GTP-binding GTPase N-terminal 49 133 2.0E-28 T 13-10-2018 IPR025121 GTPase HflX, N-terminal Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Pfam PF01926 50S ribosome-binding GTPase 221 339 7.9E-17 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0410 dad72e72c0819e6625fe373a32d68b08 451 Pfam PF16360 GTP-binding GTPase Middle Region 135 213 2.0E-27 T 13-10-2018 IPR032305 GTP-binding protein, middle domain Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 Pfam PF01478 Type IV leader peptidase family 147 255 1.9E-22 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 23 136 5.1E-32 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 222 9.6E-26 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 235 250 9.6E-26 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 223 234 9.6E-26 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thivi_0240 68f0260bba56dc7c71128c3a5bccb402 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 155 172 9.6E-26 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thivi_1232 726e0d6faa877407f0f95162245b7b2c 90 Gene3D G3DSA:3.10.450.530 1 86 1.5E-14 T 13-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily Thivi_1232 726e0d6faa877407f0f95162245b7b2c 90 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 83 1.3E-26 T 13-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Thivi_1057 86541c0e491bc1fa3b86da4e0cbefc0b 193 SUPERFAMILY SSF143243 4 153 6.8E-27 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1057 86541c0e491bc1fa3b86da4e0cbefc0b 193 Gene3D G3DSA:3.30.460.80 4 124 4.5E-16 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1057 86541c0e491bc1fa3b86da4e0cbefc0b 193 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 143 1.3E-18 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1057 86541c0e491bc1fa3b86da4e0cbefc0b 193 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 79 146 3.0E-9 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 74 7.5E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 Pfam PF01455 HupF/HypC family 1 66 1.2E-20 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 SUPERFAMILY SSF159127 1 74 1.83E-20 T 13-10-2018 IPR037254 HupF/HypC superfamily Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.1E-9 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 5.1E-9 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 5.1E-9 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_4359 b5695afb2f871617bc7816217e3938a7 89 Gene3D G3DSA:2.40.50.970 1 75 2.6E-19 T 13-10-2018 IPR037254 HupF/HypC superfamily Thivi_1552 ea185eb7cc0cd392350de45dff2030eb 301 Pfam PF13362 Toprim domain 194 292 1.5E-8 T 13-10-2018 IPR006171 TOPRIM domain Thivi_0927 397b31f23247a5678ac7ecf3f59ac07e 182 Gene3D G3DSA:1.20.950.20 1 93 8.0E-8 T 13-10-2018 Thivi_0927 397b31f23247a5678ac7ecf3f59ac07e 182 Pfam PF01292 Prokaryotic cytochrome b561 5 179 2.0E-22 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_0927 397b31f23247a5678ac7ecf3f59ac07e 182 SUPERFAMILY SSF81342 2 176 1.1E-28 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 Pfam PF00361 Proton-conducting membrane transporter 146 430 9.8E-81 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 170 191 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 439 458 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 334 346 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 266 292 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 244 265 1.2E-51 T 13-10-2018 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 665 3.5E-232 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 134 1.1E-24 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 438 460 9.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 59 83 9.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 85 105 9.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Thivi_3923 d4bf29e6e0b569f1a754d32c840ebac6 668 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 284 306 9.3E-12 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 SUPERFAMILY SSF53067 216 462 2.95E-26 T 13-10-2018 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 Gene3D G3DSA:3.30.420.40 214 256 3.8E-36 T 13-10-2018 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 PRINTS PR00301 70kDa heat shock protein signature 227 237 6.9E-8 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 PRINTS PR00301 70kDa heat shock protein signature 6 19 6.9E-8 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 PRINTS PR00301 70kDa heat shock protein signature 160 180 6.9E-8 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 Pfam PF00012 Hsp70 protein 158 334 1.7E-15 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 221 234 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 Gene3D G3DSA:3.90.640.10 257 335 3.8E-36 T 13-10-2018 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 10 17 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 Gene3D G3DSA:3.30.420.40 8 205 3.8E-36 T 13-10-2018 Thivi_3277 9ae5fa2f3eb82ffa0b2a594c20d35504 615 SUPERFAMILY SSF53067 5 204 4.21E-30 T 13-10-2018 Thivi_3793 b8ee95a96b5643aa11c5f0a05e42be5c 210 SUPERFAMILY SSF110997 133 207 9.81E-17 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_3793 b8ee95a96b5643aa11c5f0a05e42be5c 210 Gene3D G3DSA:3.30.70.1070 129 208 1.2E-17 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_3793 b8ee95a96b5643aa11c5f0a05e42be5c 210 Pfam PF05036 Sporulation related domain 133 205 6.3E-17 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 Gene3D G3DSA:3.40.50.150 1 185 5.6E-61 T 13-10-2018 Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 Pfam PF03602 Conserved hypothetical protein 95 8 181 3.2E-54 T 13-10-2018 Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 SUPERFAMILY SSF53335 7 180 2.74E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 PIRSF PIRSF004553 7 185 3.3E-49 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Thivi_2997 69bf7e71025ae16a555794dfeb24839f 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 182 3.2E-51 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Thivi_3270 c35f44bbc726ef95996bb468c63c7a25 78 SUPERFAMILY SSF143800 2 75 6.28E-30 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3270 c35f44bbc726ef95996bb468c63c7a25 78 Gene3D G3DSA:2.30.170.40 2 78 1.2E-32 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3270 c35f44bbc726ef95996bb468c63c7a25 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.8E-28 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_3270 c35f44bbc726ef95996bb468c63c7a25 78 Pfam PF00830 Ribosomal L28 family 3 62 8.2E-27 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3270 c35f44bbc726ef95996bb468c63c7a25 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.479 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2636 32892478a2c1cf75714a880836e259c5 140 SUPERFAMILY SSF50118 5 96 3.27E-14 T 13-10-2018 Thivi_2636 32892478a2c1cf75714a880836e259c5 140 Gene3D G3DSA:2.30.30.110 6 138 7.4E-8 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_2636 32892478a2c1cf75714a880836e259c5 140 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 9 129 2.1E-21 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Pfam PF00753 Metallo-beta-lactamase superfamily 242 468 7.5E-33 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Pfam PF14864 Alkyl sulfatase C-terminal 651 773 1.5E-32 T 13-10-2018 IPR029229 Alkyl sulfatase, C-terminal Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 SUPERFAMILY SSF56281 145 645 7.56E-141 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Pfam PF14863 Alkyl sulfatase dimerisation 505 643 6.0E-48 T 13-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Gene3D G3DSA:3.30.1050.10 647 778 3.2E-30 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Gene3D G3DSA:1.25.40.880 504 644 2.4E-46 T 13-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 SMART SM00849 245 468 9.4E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 Gene3D G3DSA:3.60.15.30 144 503 1.6E-145 T 13-10-2018 Thivi_1388 57858dadf0b3342cb0e70510f1911c51 799 SUPERFAMILY SSF55718 653 774 2.94E-26 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 SUPERFAMILY SSF55785 47 134 3.14E-8 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 SMART SM00382 171 314 1.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 SUPERFAMILY SSF52540 151 391 3.62E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Gene3D G3DSA:3.30.450.20 36 136 1.9E-5 T 13-10-2018 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 7.4E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 7.4E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Pfam PF00158 Sigma-54 interaction domain 151 317 3.5E-62 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Gene3D G3DSA:3.40.50.300 140 322 4.5E-60 T 13-10-2018 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Pfam PF02954 Bacterial regulatory protein, Fis family 421 461 2.1E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Gene3D G3DSA:1.10.10.60 416 465 3.3E-10 T 13-10-2018 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Gene3D G3DSA:1.10.8.60 323 394 6.3E-17 T 13-10-2018 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 SUPERFAMILY SSF46689 364 463 4.18E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4277 f8b5eb643fbc7dbe955365e9a0dba886 474 Pfam PF08448 PAS fold 47 132 1.9E-5 T 13-10-2018 IPR013656 PAS fold-4 Thivi_2827 a8f1a2448bd069a29364a2454ac1b9b9 139 SUPERFAMILY SSF54637 4 129 5.61E-29 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_2827 a8f1a2448bd069a29364a2454ac1b9b9 139 Pfam PF03061 Thioesterase superfamily 46 118 1.5E-11 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Thivi_2827 a8f1a2448bd069a29364a2454ac1b9b9 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 15 126 9.8E-26 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Thivi_2827 a8f1a2448bd069a29364a2454ac1b9b9 139 Gene3D G3DSA:3.10.129.10 1 136 2.9E-42 T 13-10-2018 Thivi_3191 d16a7591c28fd2165ffefee49a3593d7 180 Gene3D G3DSA:3.40.50.300 9 166 3.1E-53 T 13-10-2018 Thivi_3191 d16a7591c28fd2165ffefee49a3593d7 180 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 167 1.7E-40 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Thivi_3191 d16a7591c28fd2165ffefee49a3593d7 180 SUPERFAMILY SSF52540 5 169 4.62E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3191 d16a7591c28fd2165ffefee49a3593d7 180 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 141 1.9E-47 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Thivi_3191 d16a7591c28fd2165ffefee49a3593d7 180 Gene3D G3DSA:2.20.25.120 51 84 3.1E-53 T 13-10-2018 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 335 37.798 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 64 1.0E-17 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 Pfam PF00591 Glycosyl transferase family, a/b domain 75 325 8.1E-100 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 SUPERFAMILY SSF47648 1 67 5.23E-19 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 Gene3D G3DSA:1.20.970.10 1 70 8.5E-26 T 13-10-2018 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 Gene3D G3DSA:3.40.1030.10 73 340 2.2E-106 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 SUPERFAMILY SSF52418 76 336 5.63E-94 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_3591 416e47a943cbef7b9cb9c07f539529fb 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 333 3.7E-125 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Thivi_2310 830c669ef0484d3788c112334e7dd678 281 SUPERFAMILY SSF51261 43 262 2.09E-58 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_2310 830c669ef0484d3788c112334e7dd678 281 Pfam PF01551 Peptidase family M23 164 258 1.3E-34 T 13-10-2018 IPR016047 Peptidase M23 Thivi_2310 830c669ef0484d3788c112334e7dd678 281 Gene3D G3DSA:2.70.70.10 113 265 7.5E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.3E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.3E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.3E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 1.3E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 Gene3D G3DSA:1.10.150.240 18 99 3.3E-69 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 Gene3D G3DSA:3.40.50.1000 6 221 3.3E-69 T 13-10-2018 IPR023214 HAD superfamily Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 202 3.2E-25 T 13-10-2018 Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 SUPERFAMILY SSF56784 4 225 3.58E-44 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_4004 91c2ff6b12ca25fdeda18b420c915d37 259 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 202 1.7E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 Gene3D G3DSA:1.10.287.470 110 182 3.9E-63 T 13-10-2018 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 288 1.9E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 Gene3D G3DSA:2.40.420.20 299 370 3.9E-63 T 13-10-2018 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 SUPERFAMILY SSF111369 65 292 2.88E-23 T 13-10-2018 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 Gene3D G3DSA:2.40.50.100 76 222 3.9E-63 T 13-10-2018 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 Gene3D G3DSA:2.40.30.170 66 298 3.9E-63 T 13-10-2018 Thivi_1396 e3314fd56776e53021b6e7362c45f166 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 372 8.8E-73 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_1318 f6bd64a1533fa4208efb8a4f6e459fa0 295 SUPERFAMILY SSF109604 28 285 4.93E-51 T 13-10-2018 Thivi_1318 f6bd64a1533fa4208efb8a4f6e459fa0 295 Gene3D G3DSA:1.10.3210.10 16 286 3.4E-53 T 13-10-2018 Thivi_1318 f6bd64a1533fa4208efb8a4f6e459fa0 295 Pfam PF08668 HDOD domain 32 221 2.0E-45 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_4242 16136f1c965b16177870baa712dfc180 141 Gene3D G3DSA:1.10.1130.10 59 125 5.1E-27 T 13-10-2018 Thivi_4242 16136f1c965b16177870baa712dfc180 141 SUPERFAMILY SSF48695 53 140 1.59E-32 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_4242 16136f1c965b16177870baa712dfc180 141 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 19 139 2.7E-41 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Thivi_4242 16136f1c965b16177870baa712dfc180 141 PIRSF PIRSF006105 1 141 4.8E-39 T 13-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB Thivi_4258 5223b276c63ef2ffb9f5b5c12ca070c9 212 Pfam PF10531 SLBB domain 128 177 2.0E-6 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4258 5223b276c63ef2ffb9f5b5c12ca070c9 212 Gene3D G3DSA:3.10.560.10 119 209 1.7E-17 T 13-10-2018 Thivi_4258 5223b276c63ef2ffb9f5b5c12ca070c9 212 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 48 212 9.9E-70 T 13-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein Thivi_4258 5223b276c63ef2ffb9f5b5c12ca070c9 212 Gene3D G3DSA:3.30.1950.10 53 118 1.1E-9 T 13-10-2018 Thivi_4258 5223b276c63ef2ffb9f5b5c12ca070c9 212 Pfam PF02563 Polysaccharide biosynthesis/export protein 46 117 1.3E-17 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 Gene3D G3DSA:1.10.3720.10 294 554 7.0E-29 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 SUPERFAMILY SSF161098 291 544 4.14E-33 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 274 3.3E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 540 3.0E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 Gene3D G3DSA:1.10.3720.10 17 277 2.3E-46 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1338 f6c40537594a9e59e508497a9e0e241d 555 SUPERFAMILY SSF161098 10 274 4.71E-41 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_2450 4d6fbd5a9655df0d51cce52f363170dd 435 Pfam PF11902 Protein of unknown function (DUF3422) 7 426 1.8E-164 T 13-10-2018 IPR021830 Protein of unknown function DUF3422 Thivi_0608 358fb18eae6ad388fa8f399682174489 129 Pfam PF16137 Domain of unknown function (DUF4845) 35 120 4.1E-23 T 13-10-2018 IPR032314 Protein of unknown function DUF4845 Thivi_0312 0da108b904f92c5ae161816fea57badb 186 Gene3D G3DSA:2.40.50.180 43 156 4.5E-38 T 13-10-2018 Thivi_0312 0da108b904f92c5ae161816fea57badb 186 SUPERFAMILY SSF50341 20 163 1.83E-37 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0312 0da108b904f92c5ae161816fea57badb 186 Gene3D G3DSA:2.30.30.40 26 155 4.5E-38 T 13-10-2018 Thivi_0312 0da108b904f92c5ae161816fea57badb 186 SMART SM00260 20 161 4.1E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0312 0da108b904f92c5ae161816fea57badb 186 Pfam PF01584 CheW-like domain 24 162 2.7E-35 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1820 3a242e62d436c889b480fd600a51a397 312 SUPERFAMILY SSF52540 3 226 9.46E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1820 3a242e62d436c889b480fd600a51a397 312 SMART SM00382 30 212 1.3E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1820 3a242e62d436c889b480fd600a51a397 312 Gene3D G3DSA:3.40.50.300 1 235 5.8E-67 T 13-10-2018 Thivi_1820 3a242e62d436c889b480fd600a51a397 312 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1820 3a242e62d436c889b480fd600a51a397 312 Pfam PF00005 ABC transporter 22 165 6.9E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2228 f7e268853a8ddeff782dfec57135d466 159 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 21 154 7.1E-35 T 13-10-2018 IPR005247 YbhB/YbcL Thivi_2228 f7e268853a8ddeff782dfec57135d466 159 Pfam PF01161 Phosphatidylethanolamine-binding protein 16 155 1.8E-35 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Thivi_2228 f7e268853a8ddeff782dfec57135d466 159 Gene3D G3DSA:3.90.280.10 1 158 1.7E-51 T 13-10-2018 IPR036610 PEBP-like superfamily Thivi_2228 f7e268853a8ddeff782dfec57135d466 159 SUPERFAMILY SSF49777 5 158 2.62E-44 T 13-10-2018 IPR036610 PEBP-like superfamily Thivi_2174 bd885636773d97024bb2766a69f01982 289 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 2 287 9.5E-87 T 13-10-2018 IPR039480 C-C bond lyase-like Thivi_2174 bd885636773d97024bb2766a69f01982 289 SUPERFAMILY SSF51621 8 241 1.1E-28 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_2174 bd885636773d97024bb2766a69f01982 289 Gene3D G3DSA:3.20.20.60 9 287 1.3E-25 T 13-10-2018 Thivi_2174 bd885636773d97024bb2766a69f01982 289 PIRSF PIRSF015582 1 288 4.1E-47 T 13-10-2018 IPR011206 Citrate lyase beta subunit-like Thivi_1748 3186aa4d72d7acefa8aa6d58764c353b 221 Gene3D G3DSA:3.40.50.150 7 212 5.8E-52 T 13-10-2018 Thivi_1748 3186aa4d72d7acefa8aa6d58764c353b 221 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 83 110 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Thivi_1748 3186aa4d72d7acefa8aa6d58764c353b 221 SMART SM00650 67 200 6.0E-5 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Thivi_1748 3186aa4d72d7acefa8aa6d58764c353b 221 SUPERFAMILY SSF53335 6 182 7.17E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1748 3186aa4d72d7acefa8aa6d58764c353b 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 183 6.9E-34 T 13-10-2018 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 Pfam PF03705 CheR methyltransferase, all-alpha domain 17 67 7.3E-20 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 74 86 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 111 131 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PRINTS PR00996 Glutamate methyltransferase family signature 37 50 2.3E-42 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 PIRSF PIRSF000410 1 277 1.4E-99 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 Gene3D G3DSA:3.40.50.150 80 276 3.5E-67 T 13-10-2018 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 Pfam PF01739 CheR methyltransferase, SAM binding domain 81 274 1.4E-60 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 SMART SM00138 15 277 2.0E-104 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 SUPERFAMILY SSF47757 7 80 2.62E-21 T 13-10-2018 Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 SUPERFAMILY SSF53335 81 274 7.82E-57 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1221 369942ccefab5bb91e4601f8e95524cc 284 Gene3D G3DSA:1.10.155.10 4 79 1.4E-25 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Thivi_3970 8bfd92ed764800ce7eaacc993a5741e0 276 Gene3D G3DSA:3.20.20.70 1 273 5.7E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3970 8bfd92ed764800ce7eaacc993a5741e0 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 14 269 3.8E-124 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_3970 8bfd92ed764800ce7eaacc993a5741e0 276 SUPERFAMILY SSF51569 3 269 1.01E-107 T 13-10-2018 Thivi_3970 8bfd92ed764800ce7eaacc993a5741e0 276 Pfam PF00793 DAHP synthetase I family 9 268 1.6E-69 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_3970 8bfd92ed764800ce7eaacc993a5741e0 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 9 271 53.36 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_2051 035b26031582ce70a15113ff465dd6ff 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 3.6E-24 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2051 035b26031582ce70a15113ff465dd6ff 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2051 035b26031582ce70a15113ff465dd6ff 381 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2051 035b26031582ce70a15113ff465dd6ff 381 Pfam PF01609 Transposase DDE domain 203 367 4.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2497 c093c442f9e7e651f83786fdef5a143f 377 PIRSF PIRSF015658 1 376 7.2E-173 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Thivi_2497 c093c442f9e7e651f83786fdef5a143f 377 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 5.5E-164 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Thivi_2497 c093c442f9e7e651f83786fdef5a143f 377 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.2E-158 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Thivi_0340 294be22943884b9501f2002eecc8c7b6 224 Gene3D G3DSA:1.10.3210.10 34 198 4.5E-21 T 13-10-2018 Thivi_0340 294be22943884b9501f2002eecc8c7b6 224 Pfam PF13023 HD domain 42 115 1.2E-7 T 13-10-2018 IPR006674 HD domain Thivi_0340 294be22943884b9501f2002eecc8c7b6 224 SUPERFAMILY SSF109604 42 168 1.02E-14 T 13-10-2018 Thivi_1074 03f204296f7403c9b7c1d83080efeefc 238 SUPERFAMILY SSF117987 100 234 2.62E-18 T 13-10-2018 Thivi_1074 03f204296f7403c9b7c1d83080efeefc 238 SMART SM01101 17 234 1.6E-18 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_1074 03f204296f7403c9b7c1d83080efeefc 238 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 31 234 8.1E-15 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_1074 03f204296f7403c9b7c1d83080efeefc 238 Pfam PF08798 CRISPR associated protein 3 234 1.3E-31 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_1074 03f204296f7403c9b7c1d83080efeefc 238 Gene3D G3DSA:3.30.70.1210 100 235 6.8E-14 T 13-10-2018 Thivi_0866 8720122db696ffcc61cc97995364d12a 364 Pfam PF13557 Putative MetA-pathway of phenol degradation 171 364 6.1E-8 T 13-10-2018 IPR025737 MetA-pathway of phenol degradation, putative Thivi_2607 3c11cca05869740a9927052e62274004 409 SUPERFAMILY SSF53383 2 401 2.04E-87 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2607 3c11cca05869740a9927052e62274004 409 Gene3D G3DSA:3.40.640.10 43 297 2.0E-115 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_2607 3c11cca05869740a9927052e62274004 409 Gene3D G3DSA:3.90.1150.10 13 385 2.0E-115 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_2607 3c11cca05869740a9927052e62274004 409 Pfam PF00155 Aminotransferase class I and II 32 382 3.8E-40 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_2607 3c11cca05869740a9927052e62274004 409 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 398 1.1E-193 T 13-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 Thivi_4582 aba40c9cb95186e1d5d0772a765ec1f2 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Thivi_4582 aba40c9cb95186e1d5d0772a765ec1f2 68 SUPERFAMILY SSF55008 1 67 4.71E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_4582 aba40c9cb95186e1d5d0772a765ec1f2 68 Pfam PF00403 Heavy-metal-associated domain 5 63 1.2E-16 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Thivi_4582 aba40c9cb95186e1d5d0772a765ec1f2 68 Gene3D G3DSA:3.30.70.100 2 67 7.4E-23 T 13-10-2018 Thivi_1936 fc5d566717a324577b1e43a8ed21e5c9 259 PIRSF PIRSF006102 4 221 5.2E-73 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_1936 fc5d566717a324577b1e43a8ed21e5c9 259 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 213 26.013 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_1936 fc5d566717a324577b1e43a8ed21e5c9 259 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 203 2.8E-59 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_1936 fc5d566717a324577b1e43a8ed21e5c9 259 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 11 212 2.4E-77 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 203 3.1E-46 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 SUPERFAMILY SSF52402 15 231 2.71E-54 T 13-10-2018 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 SUPERFAMILY SSF56037 340 434 7.85E-19 T 13-10-2018 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Pfam PF01171 PP-loop family 23 199 1.1E-49 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 376 421 1.4E-9 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Pfam PF09179 TilS substrate binding domain 249 315 3.4E-15 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Gene3D G3DSA:3.40.50.620 14 233 1.7E-66 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 SUPERFAMILY SSF82829 245 320 5.75E-19 T 13-10-2018 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Gene3D G3DSA:1.20.59.20 235 319 2.7E-18 T 13-10-2018 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 SMART SM00977 375 447 2.3E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Pfam PF11734 TilS substrate C-terminal domain 375 438 2.8E-16 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0838 aa08b7a0806d122acf0dca3f5d3245b2 475 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 308 22.392 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Thivi_0374 3d1000f8a6b766605f59a424827606af 276 Gene3D G3DSA:3.40.50.300 12 252 1.8E-51 T 13-10-2018 Thivi_0374 3d1000f8a6b766605f59a424827606af 276 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 13 232 1.3E-20 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_0374 3d1000f8a6b766605f59a424827606af 276 SUPERFAMILY SSF52540 13 254 3.13E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0374 3d1000f8a6b766605f59a424827606af 276 PIRSF PIRSF003092 6 274 1.7E-68 T 13-10-2018 IPR025501 ATP binding protein MinD Thivi_4041 f3465181c45df87a8f95fa54ca0da9b5 347 Pfam PF00534 Glycosyl transferases group 1 225 280 1.3E-9 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_4041 f3465181c45df87a8f95fa54ca0da9b5 347 SUPERFAMILY SSF53756 10 343 6.85E-22 T 13-10-2018 Thivi_4041 f3465181c45df87a8f95fa54ca0da9b5 347 Gene3D G3DSA:3.40.50.2000 156 342 1.4E-19 T 13-10-2018 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 247 6.1E-23 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 Gene3D G3DSA:3.30.420.40 2 246 7.1E-67 T 13-10-2018 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 Pfam PF03309 Type III pantothenate kinase 1 204 1.6E-40 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 SUPERFAMILY SSF53067 1 111 1.1E-21 T 13-10-2018 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 Gene3D G3DSA:3.30.420.490 125 241 7.1E-67 T 13-10-2018 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 SUPERFAMILY SSF53067 124 250 3.63E-26 T 13-10-2018 Thivi_0686 dfeed9e966e6301efd13dbacde3f77e9 256 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 253 17.509 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Thivi_2253 99862a98fb2e1e8e467c79b1acbf3719 775 SUPERFAMILY SSF82866 589 771 1.7E-15 T 13-10-2018 Thivi_2253 99862a98fb2e1e8e467c79b1acbf3719 775 SUPERFAMILY SSF82866 189 389 3.53E-19 T 13-10-2018 Thivi_2253 99862a98fb2e1e8e467c79b1acbf3719 775 Pfam PF03176 MMPL family 182 388 1.9E-5 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 189 7.3E-36 T 13-10-2018 Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 199 2.5E-37 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 SUPERFAMILY SSF56784 9 194 7.29E-22 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 190 4.3E-27 T 13-10-2018 Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 Gene3D G3DSA:3.40.50.1000 9 194 5.5E-33 T 13-10-2018 IPR023214 HAD superfamily Thivi_2917 29d31cab5d61b652f705eb6c7332c0e9 200 Gene3D G3DSA:1.20.1440.100 20 91 5.5E-33 T 13-10-2018 Thivi_0258 edccb0413784374b1db1d4a6aa4060b0 534 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.0E-174 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Thivi_0258 edccb0413784374b1db1d4a6aa4060b0 534 PIRSF PIRSF006446 2 528 8.7E-143 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Thivi_2918 850f41951e69072fb44a32cb06038016 499 SUPERFAMILY SSF56112 136 267 3.42E-16 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_2918 850f41951e69072fb44a32cb06038016 499 SMART SM00220 16 352 9.1E-4 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_2918 850f41951e69072fb44a32cb06038016 499 Pfam PF00069 Protein kinase domain 152 269 4.5E-9 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_2918 850f41951e69072fb44a32cb06038016 499 Gene3D G3DSA:1.10.510.10 127 350 2.6E-13 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 Gene3D G3DSA:2.40.50.100 67 195 1.3E-77 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 Gene3D G3DSA:2.40.30.170 57 278 1.3E-77 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 Gene3D G3DSA:1.10.287.470 102 161 1.3E-77 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 268 5.4E-31 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 Gene3D G3DSA:2.40.420.20 279 350 1.3E-77 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 SUPERFAMILY SSF111369 58 271 1.83E-45 T 13-10-2018 Thivi_4560 bccaef0707b456cc98a5d9d09588ae13 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 9.9E-79 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_3211 00cfad3ad58a9e61a5120b7ad13cb789 312 Pfam PF02277 Phosphoribosyltransferase 211 270 5.4E-8 T 13-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_3211 00cfad3ad58a9e61a5120b7ad13cb789 312 Gene3D G3DSA:3.40.50.10210 64 278 6.0E-15 T 13-10-2018 Thivi_3211 00cfad3ad58a9e61a5120b7ad13cb789 312 SUPERFAMILY SSF52733 100 272 2.62E-13 T 13-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Thivi_0210 eb8d10683f58354a54c47af3665831a5 339 Gene3D G3DSA:1.10.8.300 220 336 1.1E-34 T 13-10-2018 Thivi_0210 eb8d10683f58354a54c47af3665831a5 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 186 4.8E-63 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Thivi_0210 eb8d10683f58354a54c47af3665831a5 339 Gene3D G3DSA:3.40.50.300 37 203 4.6E-44 T 13-10-2018 Thivi_0210 eb8d10683f58354a54c47af3665831a5 339 SUPERFAMILY SSF52540 26 311 1.2E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0210 eb8d10683f58354a54c47af3665831a5 339 PIRSF PIRSF002849 5 339 3.4E-129 T 13-10-2018 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 Gene3D G3DSA:3.30.930.10 7 336 8.6E-69 T 13-10-2018 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 PIRSF PIRSF001549 8 389 1.3E-41 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 Pfam PF13393 Histidyl-tRNA synthetase 14 324 1.2E-114 T 13-10-2018 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 SUPERFAMILY SSF55681 9 327 2.74E-56 T 13-10-2018 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 17 326 2.9E-82 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Thivi_0415 f0015583a8766fcbd70db22615d5dc95 408 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 21 379 30.317 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Thivi_3147 62643cd10b914cd257f264b818f60124 900 Pfam PF04851 Type III restriction enzyme, res subunit 131 343 2.1E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_3147 62643cd10b914cd257f264b818f60124 900 SUPERFAMILY SSF52540 125 346 1.42E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3364 d0545811a22322662837b825cbcd8759 265 SUPERFAMILY SSF64438 3 249 1.14E-80 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_3364 d0545811a22322662837b825cbcd8759 265 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 248 1.6E-77 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Thivi_3364 d0545811a22322662837b825cbcd8759 265 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 249 1.5E-56 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Thivi_3364 d0545811a22322662837b825cbcd8759 265 Gene3D G3DSA:3.60.140.10 1 252 5.4E-88 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 215 298 2.1E-6 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 Gene3D G3DSA:3.30.1490.20 215 305 7.9E-16 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 Gene3D G3DSA:3.30.470.20 372 472 1.9E-11 T 13-10-2018 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 6 715 2.1E-276 T 13-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 SUPERFAMILY SSF53623 481 712 3.27E-17 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 SUPERFAMILY SSF56059 216 473 1.24E-32 T 13-10-2018 Thivi_0044 636b33b836b5d86923b1dc23de4e7a24 720 Gene3D G3DSA:3.40.1190.10 473 712 2.4E-19 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0265 229dffdba2a3dc407f9623b0f8750259 435 Pfam PF04966 Carbohydrate-selective porin, OprB family 74 435 1.3E-60 T 13-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 Thivi_0265 229dffdba2a3dc407f9623b0f8750259 435 Gene3D G3DSA:2.40.160.180 30 435 2.5E-110 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 50.857 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 2 125 2.0E-36 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 SUPERFAMILY SSF89447 2 135 3.4E-44 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 Pfam PF02381 MraZ protein, putative antitoxin-like 3 75 6.0E-16 T 13-10-2018 IPR020603 MraZ domain Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 Pfam PF02381 MraZ protein, putative antitoxin-like 79 131 3.6E-15 T 13-10-2018 IPR020603 MraZ domain Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 Gene3D G3DSA:2.40.330.20 1 143 4.2E-43 T 13-10-2018 IPR038619 MraZ superfamily Thivi_2327 45a18c5e55192d5e74aeffd2ff2c0545 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 3 132 9.2E-41 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 SMART SM00471 171 322 2.1E-11 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 Gene3D G3DSA:1.10.3210.10 150 365 5.1E-77 T 13-10-2018 Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 Pfam PF00072 Response regulator receiver domain 12 122 1.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 SUPERFAMILY SSF52172 9 155 2.13E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 Pfam PF01966 HD domain 176 312 3.1E-16 T 13-10-2018 IPR006674 HD domain Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 Gene3D G3DSA:3.40.50.2300 5 140 2.3E-38 T 13-10-2018 Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 SMART SM00448 10 122 9.2E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4163 de90f9bd87f8fa97593703a60462ba82 365 SUPERFAMILY SSF109604 161 351 3.05E-36 T 13-10-2018 Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 Gene3D G3DSA:3.40.50.620 2 154 4.0E-34 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 PRINTS PR01438 Universal stress protein signature 6 24 3.4E-12 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 PRINTS PR01438 Universal stress protein signature 129 151 3.4E-12 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 PRINTS PR01438 Universal stress protein signature 112 124 3.4E-12 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 SUPERFAMILY SSF52402 6 152 4.1E-32 T 13-10-2018 Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 Pfam PF00582 Universal stress protein family 6 151 4.0E-30 T 13-10-2018 IPR006016 UspA Thivi_0810 b1eb2ee147c1e652ab87afd3313e3b11 157 PIRSF PIRSF006276 1 154 3.8E-30 T 13-10-2018 IPR006015 Universal stress protein A Thivi_2972 f12842aba9ae7af4aed5934fd82863d6 346 Gene3D G3DSA:3.30.70.270 166 340 1.9E-46 T 13-10-2018 Thivi_2972 f12842aba9ae7af4aed5934fd82863d6 346 SMART SM00267 170 340 5.0E-48 T 13-10-2018 IPR000160 GGDEF domain Thivi_2972 f12842aba9ae7af4aed5934fd82863d6 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 338 4.7E-37 T 13-10-2018 IPR000160 GGDEF domain Thivi_2972 f12842aba9ae7af4aed5934fd82863d6 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 336 2.5E-39 T 13-10-2018 IPR000160 GGDEF domain Thivi_2972 f12842aba9ae7af4aed5934fd82863d6 346 SUPERFAMILY SSF55073 186 338 2.59E-39 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.0E-17 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.0E-17 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.0E-17 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 SMART SM01403 7 101 5.4E-56 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 9.0E-46 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.1E-34 T 13-10-2018 IPR027486 Ribosomal protein S10 domain Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.323 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 Gene3D G3DSA:3.30.70.600 1 103 5.1E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Thivi_4200 730aba9c29f78d86b0ff9a5236f9c7a1 103 SUPERFAMILY SSF54999 5 102 2.75E-36 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 Pfam PF13353 4Fe-4S single cluster domain 118 185 4.0E-5 T 13-10-2018 Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 SUPERFAMILY SSF102114 111 329 5.1E-25 T 13-10-2018 Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 Pfam PF04055 Radical SAM superfamily 121 234 3.2E-7 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 19 340 3.0E-127 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 Gene3D G3DSA:3.20.20.70 54 339 5.4E-85 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 PIRSF PIRSF004911 2 340 1.4E-106 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Thivi_0221 6935bda0cb9eafdc1d34826c21819c2a 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 17 333 6.0E-88 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Thivi_1929 7f9b590779269b0842b21666fd726293 458 SUPERFAMILY SSF103473 6 431 2.49E-64 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_1929 7f9b590779269b0842b21666fd726293 458 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Thivi_1929 7f9b590779269b0842b21666fd726293 458 Pfam PF07690 Major Facilitator Superfamily 22 265 2.5E-24 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_1929 7f9b590779269b0842b21666fd726293 458 Gene3D G3DSA:1.20.1250.20 7 208 1.4E-36 T 13-10-2018 Thivi_1929 7f9b590779269b0842b21666fd726293 458 Gene3D G3DSA:1.20.1250.20 223 431 3.0E-27 T 13-10-2018 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 39.644 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 Gene3D G3DSA:3.40.50.620 5 216 1.9E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 6.9E-83 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 PIRSF PIRSF000857 2 243 1.9E-56 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.4E-51 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 SUPERFAMILY SSF52402 25 208 1.16E-54 T 13-10-2018 Thivi_1407 ac2168abded751a9a9894f7dbcfd2f99 243 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 242 1.6E-85 T 13-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 Thivi_4313 a6f377b78cb5887e957b77f8a81a1c37 200 Gene3D G3DSA:3.90.1570.10 3 188 1.8E-18 T 13-10-2018 Thivi_4313 a6f377b78cb5887e957b77f8a81a1c37 200 SUPERFAMILY SSF52980 3 184 4.45E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_4313 a6f377b78cb5887e957b77f8a81a1c37 200 Pfam PF05685 Putative restriction endonuclease 11 171 7.5E-31 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 SUPERFAMILY SSF50615 10 77 1.8E-6 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 92 213 1.2E-42 T 13-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Gene3D G3DSA:1.10.1140.10 446 598 2.4E-37 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 223 444 7.6E-89 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 435 444 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Gene3D G3DSA:2.40.30.20 5 79 8.7E-19 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 10 596 48.501 T 13-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 SUPERFAMILY SSF52540 186 447 5.91E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Gene3D G3DSA:2.40.50.100 123 196 1.8E-168 T 13-10-2018 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 SUPERFAMILY SSF47917 458 540 1.26E-13 T 13-10-2018 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Gene3D G3DSA:3.40.50.300 80 444 1.8E-168 T 13-10-2018 Thivi_1779 30f61d76211aec700df52d2e0dd64d9d 610 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 17 76 6.9E-6 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1789 a554d827935b0e93aa4b54723ce1935d 236 Gene3D G3DSA:3.40.50.880 1 230 2.9E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1789 a554d827935b0e93aa4b54723ce1935d 236 Pfam PF00117 Glutamine amidotransferase class-I 43 182 5.7E-13 T 13-10-2018 IPR017926 Glutamine amidotransferase Thivi_1789 a554d827935b0e93aa4b54723ce1935d 236 SUPERFAMILY SSF52317 1 194 3.01E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 Pfam PF02381 MraZ protein, putative antitoxin-like 5 76 6.3E-11 T 13-10-2018 IPR020603 MraZ domain Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 Pfam PF02381 MraZ protein, putative antitoxin-like 78 131 9.4E-11 T 13-10-2018 IPR020603 MraZ domain Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 SUPERFAMILY SSF89447 1 142 2.24E-33 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 5 144 9.0E-23 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 Gene3D G3DSA:2.40.330.20 1 147 1.5E-34 T 13-10-2018 IPR038619 MraZ superfamily Thivi_2780 b6003c4a42f6f2d2b25e6cc83821fd71 159 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 159 34.706 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 Pfam PF14622 Ribonuclease-III-like 19 137 1.5E-31 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 SMART SM00535 20 148 1.8E-46 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.33 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 SMART SM00358 155 223 1.3E-17 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 SUPERFAMILY SSF69065 11 158 5.93E-43 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 Gene3D G3DSA:3.30.160.20 153 224 8.2E-21 T 13-10-2018 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 Gene3D G3DSA:1.10.1520.10 6 145 3.2E-39 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 SUPERFAMILY SSF54768 108 222 7.07E-29 T 13-10-2018 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 222 3.2E-69 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Thivi_0609 9a610f30670b952921becbeff5a6eef2 224 Pfam PF00035 Double-stranded RNA binding motif 155 221 2.5E-14 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 Gene3D G3DSA:3.90.1150.10 30 360 1.7E-113 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 Gene3D G3DSA:3.40.640.10 52 276 1.7E-113 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 Pfam PF00155 Aminotransferase class I and II 39 359 2.1E-50 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 368 59.953 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 SUPERFAMILY SSF53383 21 368 5.23E-78 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2124 4c84ed0fff2d3673e6e22759cba63f4c 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 16 366 4.3E-103 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Thivi_3483 184a57bb7528a247361bd31c116b9d2a 577 SUPERFAMILY SSF48452 312 414 8.35E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 Gene3D G3DSA:3.30.420.40 5 238 5.2E-48 T 13-10-2018 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 SUPERFAMILY SSF53067 9 245 1.19E-40 T 13-10-2018 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 PIRSF PIRSF000538 6 433 2.4E-51 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 Gene3D G3DSA:3.30.420.40 239 433 2.9E-31 T 13-10-2018 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 10 241 4.0E-23 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 SUPERFAMILY SSF53067 248 429 3.56E-20 T 13-10-2018 Thivi_2514 316ee41cb873bcf84eccdef2ed146b8a 434 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 251 427 2.2E-13 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Thivi_3938 a2868f659ca8e46ed9f97bc0c3e98cbd 381 Pfam PF03916 Polysulphide reductase, NrfD 42 327 7.6E-13 T 13-10-2018 IPR005614 NrfD family Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 Gene3D G3DSA:3.40.50.1980 27 474 7.0E-229 T 13-10-2018 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 81 88 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 62 467 1.6E-111 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 12 479 1.4E-266 T 13-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 Gene3D G3DSA:3.40.50.1980 206 345 7.0E-229 T 13-10-2018 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 27 473 3.2E-202 T 13-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 152 166 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 Gene3D G3DSA:3.40.50.1980 63 205 7.0E-229 T 13-10-2018 Thivi_3648 ea50693acc638bf637b6ec4e56fa4446 494 SUPERFAMILY SSF53807 7 479 7.03E-167 T 13-10-2018 Thivi_3230 963cfe40434b3c12903bd564cad70ba2 113 SUPERFAMILY SSF52091 14 102 1.26E-11 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_3230 963cfe40434b3c12903bd564cad70ba2 113 Pfam PF13466 STAS domain 16 98 2.0E-14 T 13-10-2018 IPR002645 STAS domain Thivi_3230 963cfe40434b3c12903bd564cad70ba2 113 Gene3D G3DSA:3.30.750.24 13 108 7.7E-13 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_2320 3918acceaf2c390ccf64e0d8354e1d29 414 Pfam PF01098 Cell cycle protein 26 379 1.4E-102 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2320 3918acceaf2c390ccf64e0d8354e1d29 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 377 3.8E-128 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2320 3918acceaf2c390ccf64e0d8354e1d29 414 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 20 390 40.821 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3497 ec8e3545cfef74f72769a59532864fb9 645 SUPERFAMILY SSF52540 19 310 1.1E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3497 ec8e3545cfef74f72769a59532864fb9 645 Pfam PF13476 AAA domain 17 265 1.3E-7 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Thivi_3497 ec8e3545cfef74f72769a59532864fb9 645 Gene3D G3DSA:3.40.50.300 413 616 6.3E-8 T 13-10-2018 Thivi_3497 ec8e3545cfef74f72769a59532864fb9 645 Gene3D G3DSA:3.40.50.300 11 324 1.7E-9 T 13-10-2018 Thivi_3497 ec8e3545cfef74f72769a59532864fb9 645 SUPERFAMILY SSF52540 15 590 2.07E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 Gene3D G3DSA:2.160.10.10 291 409 1.3E-27 T 13-10-2018 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 SUPERFAMILY SSF53448 4 357 5.87E-72 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 Gene3D G3DSA:3.90.550.10 1 290 3.4E-83 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 3 403 42.22 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 Pfam PF00483 Nucleotidyl transferase 8 275 3.5E-61 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_4327 7adbd9942ca21c2b225fcae3edf26fed 419 SUPERFAMILY SSF51161 305 393 2.8E-15 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2177 81765d303806656106d66ecd803d60a8 344 Gene3D G3DSA:3.90.25.10 193 336 3.1E-109 T 13-10-2018 Thivi_2177 81765d303806656106d66ecd803d60a8 344 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 264 2.6E-53 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Thivi_2177 81765d303806656106d66ecd803d60a8 344 SUPERFAMILY SSF51735 1 339 5.15E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2177 81765d303806656106d66ecd803d60a8 344 PRINTS PR01713 Nucleotide sugar epimerase signature 303 320 2.8E-7 T 13-10-2018 Thivi_2177 81765d303806656106d66ecd803d60a8 344 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 2.8E-7 T 13-10-2018 Thivi_2177 81765d303806656106d66ecd803d60a8 344 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 2.8E-7 T 13-10-2018 Thivi_2177 81765d303806656106d66ecd803d60a8 344 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 2.8E-7 T 13-10-2018 Thivi_2177 81765d303806656106d66ecd803d60a8 344 Gene3D G3DSA:3.40.50.720 19 324 3.1E-109 T 13-10-2018 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 Gene3D G3DSA:2.40.10.240 85 181 1.1E-110 T 13-10-2018 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 SUPERFAMILY SSF111337 25 358 3.01E-129 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 Gene3D G3DSA:3.40.1780.10 35 357 1.1E-110 T 13-10-2018 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 Pfam PF02547 Queuosine biosynthesis protein 25 358 7.4E-128 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 22 358 3.0E-127 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Thivi_0679 51c9a1505a5fde7282ede6cd2f0d62bf 364 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 22 359 45.043 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Pfam PF01103 Surface antigen 458 776 3.2E-74 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:3.10.20.310 185 273 2.0E-21 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:2.40.160.50 436 776 2.1E-103 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:3.10.20.310 29 101 5.4E-17 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 PIRSF PIRSF006076 2 776 2.4E-252 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:3.10.20.310 358 435 1.8E-24 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 13 776 24.609 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Pfam PF07244 Surface antigen variable number repeat 103 182 1.9E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Pfam PF07244 Surface antigen variable number repeat 277 354 1.2E-10 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Pfam PF07244 Surface antigen variable number repeat 186 273 6.1E-16 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Pfam PF07244 Surface antigen variable number repeat 357 431 7.7E-16 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:3.10.20.310 102 183 2.9E-16 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 Gene3D G3DSA:3.10.20.310 274 356 3.3E-17 T 13-10-2018 Thivi_2753 d371885c658fac9e60a2f304ed87fc0b 776 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 34 776 5.2E-261 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Thivi_3561 214e199c2639dd3aea3791eddee05c5d 500 Pfam PF13531 Bacterial extracellular solute-binding protein 138 438 2.3E-16 T 13-10-2018 Thivi_3561 214e199c2639dd3aea3791eddee05c5d 500 SUPERFAMILY SSF53850 136 453 1.33E-7 T 13-10-2018 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 Pfam PF02637 GatB domain 328 475 3.5E-51 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 SUPERFAMILY SSF89095 297 402 8.24E-35 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 SMART SM00845 328 475 7.3E-80 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 38.439 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 475 3.2E-176 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 Gene3D G3DSA:1.10.10.410 415 477 3.9E-25 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 Pfam PF02934 GatB/GatE catalytic domain 5 288 8.1E-112 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 SUPERFAMILY SSF55931 4 296 3.4E-119 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Thivi_3434 4ca824a34bee1ea737b47ab17ff28ac3 477 Gene3D G3DSA:1.10.150.380 297 414 9.8E-36 T 13-10-2018 Thivi_0247 6a9771075b70818f633c2af357e78ddf 599 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 9 590 4.4E-250 T 13-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily Thivi_0247 6a9771075b70818f633c2af357e78ddf 599 Pfam PF00474 Sodium:solute symporter family 34 303 1.9E-37 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_0247 6a9771075b70818f633c2af357e78ddf 599 Pfam PF00474 Sodium:solute symporter family 396 512 9.0E-15 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_0247 6a9771075b70818f633c2af357e78ddf 599 Gene3D G3DSA:1.20.1730.10 23 328 2.3E-36 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_0247 6a9771075b70818f633c2af357e78ddf 599 Gene3D G3DSA:1.20.1730.10 357 576 1.1E-24 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_3056 3524cad2ca10bb277f2a85e5356b497c 362 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 271 1.1E-7 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_3056 3524cad2ca10bb277f2a85e5356b497c 362 Gene3D G3DSA:2.40.30.170 249 290 6.9E-18 T 13-10-2018 Thivi_3056 3524cad2ca10bb277f2a85e5356b497c 362 Gene3D G3DSA:2.40.50.100 65 248 6.9E-18 T 13-10-2018 Thivi_3056 3524cad2ca10bb277f2a85e5356b497c 362 Gene3D G3DSA:1.10.287.470 95 207 6.9E-18 T 13-10-2018 Thivi_0623 98a36c9346748033f25959ed5fa7871b 161 Pfam PF02082 Transcriptional regulator 1 83 6.6E-25 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Thivi_0623 98a36c9346748033f25959ed5fa7871b 161 SUPERFAMILY SSF46785 2 132 1.45E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0623 98a36c9346748033f25959ed5fa7871b 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 8.1E-42 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type Thivi_0623 98a36c9346748033f25959ed5fa7871b 161 Gene3D G3DSA:1.10.10.10 1 139 6.5E-49 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0930 d7deb6931c4acc0d630d3fd5f91bb0c5 229 Gene3D G3DSA:3.40.50.300 1 227 3.0E-63 T 13-10-2018 Thivi_0930 d7deb6931c4acc0d630d3fd5f91bb0c5 229 SMART SM00382 30 217 1.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0930 d7deb6931c4acc0d630d3fd5f91bb0c5 229 Pfam PF00005 ABC transporter 21 169 2.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0930 d7deb6931c4acc0d630d3fd5f91bb0c5 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0930 d7deb6931c4acc0d630d3fd5f91bb0c5 229 SUPERFAMILY SSF52540 1 223 2.26E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 PIRSF PIRSF037208 4 251 1.5E-85 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 Gene3D G3DSA:3.40.630.30 108 244 3.6E-5 T 13-10-2018 Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 21 91 1.8E-20 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 112 234 4.5E-39 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 11 241 39.698 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Thivi_0946 9a50790bad87efc870ed6c04f63e0d62 252 SUPERFAMILY SSF55729 84 243 3.69E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_3830 e76ec36b4a71069df29b65a28952e5f6 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3830 e76ec36b4a71069df29b65a28952e5f6 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 32 378 1.8E-134 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3830 e76ec36b4a71069df29b65a28952e5f6 382 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 26 380 28.316 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3830 e76ec36b4a71069df29b65a28952e5f6 382 Pfam PF01098 Cell cycle protein 36 378 4.6E-110 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3774 f053f4206dbd5e7d1e9b0060e13d17e4 175 Pfam PF01569 PAP2 superfamily 65 170 9.3E-19 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_3774 f053f4206dbd5e7d1e9b0060e13d17e4 175 Gene3D G3DSA:1.20.144.10 93 175 9.2E-17 T 13-10-2018 Thivi_3774 f053f4206dbd5e7d1e9b0060e13d17e4 175 SUPERFAMILY SSF48317 18 173 1.14E-32 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Thivi_3774 f053f4206dbd5e7d1e9b0060e13d17e4 175 SMART SM00014 62 171 2.5E-13 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_2302 429c752faf6b3faf34896979d99e93b0 1183 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 14 1181 0.0 T 13-10-2018 IPR017731 Type VI secretion system, IcmF Thivi_2302 429c752faf6b3faf34896979d99e93b0 1183 Pfam PF14331 ImcF-related N-terminal domain 199 457 2.2E-96 T 13-10-2018 IPR025743 ImcF-related, N-terminal domain Thivi_2302 429c752faf6b3faf34896979d99e93b0 1183 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 815 4.8E-90 T 13-10-2018 IPR009612 ImcF-related Thivi_2302 429c752faf6b3faf34896979d99e93b0 1183 Pfam PF06744 Type VI secretion protein IcmF C-terminal 935 1131 4.5E-61 T 13-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal Thivi_2302 429c752faf6b3faf34896979d99e93b0 1183 SUPERFAMILY SSF52540 129 298 3.33E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1091 acd92acf87bbf6b19eb88c498d8a878d 260 SUPERFAMILY SSF54593 142 255 7.65E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_1091 acd92acf87bbf6b19eb88c498d8a878d 260 SUPERFAMILY SSF54593 10 168 2.95E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_1091 acd92acf87bbf6b19eb88c498d8a878d 260 Gene3D G3DSA:3.10.180.10 8 129 4.8E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_1091 acd92acf87bbf6b19eb88c498d8a878d 260 Gene3D G3DSA:3.10.180.10 136 258 3.4E-36 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.2E-28 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PIRSF PIRSF001529 1 425 4.2E-172 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 400 7.4E-32 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 Gene3D G3DSA:1.10.287.40 1 104 5.7E-18 T 13-10-2018 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 SUPERFAMILY SSF46589 1 112 7.32E-28 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 SUPERFAMILY SSF55681 117 418 9.48E-99 T 13-10-2018 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 40.285 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 3.6E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 3.6E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 3.6E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 3.6E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 3.6E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 4.5E-166 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Thivi_0925 fa772d300a82bf27da5f3ac2398c767e 425 Gene3D G3DSA:3.30.930.10 105 425 1.2E-116 T 13-10-2018 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 Gene3D G3DSA:3.40.50.450 5 398 1.0E-145 T 13-10-2018 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 PIRSF PIRSF036483 2 416 2.3E-195 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 179 195 2.0E-8 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.0E-8 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 154 2.0E-8 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 2.0E-8 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 SUPERFAMILY SSF53784 3 411 1.02E-102 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 Gene3D G3DSA:3.40.50.460 142 385 1.0E-145 T 13-10-2018 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 Pfam PF00365 Phosphofructokinase 10 318 1.5E-43 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Thivi_3381 75e4b7b6ebb2b0e332307f3cb2f3c042 417 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 397 43.051 T 13-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 SMART SM00411 1 90 7.0E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-35 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 8.8E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.8E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.8E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.3E-33 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Thivi_0631 8fb26feeea4342e7b386281cbb7f0143 90 SUPERFAMILY SSF47729 1 90 6.48E-31 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 Pfam PF02685 Glucokinase 4 324 1.9E-103 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 Hamap MF_00524 Glucokinase [glk]. 2 326 32.085 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 Gene3D G3DSA:3.40.367.20 100 309 7.5E-109 T 13-10-2018 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 Gene3D G3DSA:3.30.420.40 4 320 7.5E-109 T 13-10-2018 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 TIGRFAM TIGR00749 glk: glucokinase 4 320 2.1E-79 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Thivi_4581 04fcd1b8b49aeecb1842852c7eccbd4c 326 SUPERFAMILY SSF53067 1 324 1.3E-56 T 13-10-2018 Thivi_4384 ee3f2d1a6e8b8acf0f8e719f572f65fa 196 Gene3D G3DSA:1.20.58.760 40 196 5.7E-12 T 13-10-2018 Thivi_4384 ee3f2d1a6e8b8acf0f8e719f572f65fa 196 Pfam PF01434 Peptidase family M41 42 172 1.3E-4 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_4384 ee3f2d1a6e8b8acf0f8e719f572f65fa 196 SUPERFAMILY SSF140990 44 193 2.09E-15 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Thivi_1386 17ebfc5b7df0edf904e0317e32c0c18f 308 SUPERFAMILY SSF161111 13 219 6.8E-29 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_1386 17ebfc5b7df0edf904e0317e32c0c18f 308 Gene3D G3DSA:1.20.1510.10 15 220 2.4E-18 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_1386 17ebfc5b7df0edf904e0317e32c0c18f 308 Pfam PF01545 Cation efflux family 18 220 1.8E-33 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_3451 b3e7248791e6e6756aeb4c90afe21ac4 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 215 1.3E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_3451 b3e7248791e6e6756aeb4c90afe21ac4 221 SUPERFAMILY SSF161098 10 219 1.1E-44 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3451 b3e7248791e6e6756aeb4c90afe21ac4 221 Gene3D G3DSA:1.10.3720.10 6 220 8.4E-47 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1756 1ec90caccec97f8e74fa5da6ab85f0e4 154 Gene3D G3DSA:2.60.40.790 33 140 5.4E-24 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1756 1ec90caccec97f8e74fa5da6ab85f0e4 154 SUPERFAMILY SSF49764 7 139 1.71E-23 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1756 1ec90caccec97f8e74fa5da6ab85f0e4 154 Pfam PF00011 Hsp20/alpha crystallin family 42 139 3.4E-18 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Gene3D G3DSA:3.30.450.20 135 266 1.2E-54 T 13-10-2018 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 SUPERFAMILY SSF58104 425 733 5.1E-77 T 13-10-2018 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Gene3D G3DSA:1.10.287.950 403 734 5.6E-76 T 13-10-2018 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 SMART SM00304 403 457 1.1E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Pfam PF02743 Cache domain 112 356 2.6E-17 T 13-10-2018 IPR033479 Double Cache domain 1 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 SMART SM00283 472 733 4.9E-79 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Gene3D G3DSA:3.30.450.20 267 367 1.2E-54 T 13-10-2018 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Pfam PF00672 HAMP domain 405 454 1.6E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_2355 c97a50a013c0c7ad4c80b8bc87a7fea9 734 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 517 700 2.0E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_3443 b179a05c5457f0a17b7a480cfbc02192 311 Pfam PF03547 Membrane transport protein 10 145 1.5E-11 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Thivi_3443 b179a05c5457f0a17b7a480cfbc02192 311 Pfam PF03547 Membrane transport protein 161 302 2.2E-12 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 188 5.5E-59 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 Pfam PF01634 ATP phosphoribosyltransferase 56 208 8.2E-51 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 SUPERFAMILY SSF53850 5 211 1.89E-65 T 13-10-2018 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 147 168 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 Gene3D G3DSA:3.40.190.10 98 180 1.6E-72 T 13-10-2018 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 Gene3D G3DSA:3.40.190.10 8 201 1.6E-72 T 13-10-2018 Thivi_3228 d9493e2f3ed19e39131871307f3c68a7 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 6 212 55.171 T 13-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Thivi_3218 092d8d232f228e8a20cae06ff2b66f86 347 PIRSF PIRSF039012 2 322 1.8E-84 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Thivi_3218 092d8d232f228e8a20cae06ff2b66f86 347 Gene3D G3DSA:3.40.630.10 16 319 3.7E-84 T 13-10-2018 Thivi_3218 092d8d232f228e8a20cae06ff2b66f86 347 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 318 1.8E-48 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Thivi_3218 092d8d232f228e8a20cae06ff2b66f86 347 SUPERFAMILY SSF53187 27 318 4.3E-66 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:1.10.287.470 222 248 3.1E-7 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:1.10.287.470 324 351 8.3E-10 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Pfam PF13437 HlyD family secretion protein 352 433 1.7E-9 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 SUPERFAMILY SSF111369 256 315 1.96E-6 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 SUPERFAMILY SSF111369 188 245 2.62E-5 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:2.40.30.170 387 462 8.3E-10 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:1.10.287.470 256 317 1.8E-9 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 73 9.7E-12 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:2.40.50.100 188 221 3.1E-7 T 13-10-2018 Thivi_1821 0de01432199b9747ee2713a9449a0287 470 Gene3D G3DSA:2.40.50.100 352 386 8.3E-10 T 13-10-2018 Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 SUPERFAMILY SSF75217 75 241 2.77E-49 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 SUPERFAMILY SSF88697 3 67 2.46E-10 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 PIRSF PIRSF015601 2 240 1.9E-51 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 Pfam PF04452 RNA methyltransferase 25 236 4.7E-63 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 Gene3D G3DSA:3.40.1280.10 75 243 1.3E-55 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 Gene3D G3DSA:2.40.240.20 1 69 1.1E-13 T 13-10-2018 Thivi_3302 0e3f59055891820af99c1144cb0d8f65 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 240 1.4E-53 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Thivi_1808 fba792250d35772b0001b90c2c465005 258 Gene3D G3DSA:3.20.20.140 1 258 4.4E-75 T 13-10-2018 Thivi_1808 fba792250d35772b0001b90c2c465005 258 Pfam PF01026 TatD related DNase 4 255 1.3E-62 T 13-10-2018 IPR001130 TatD family GO:0016788 Thivi_1808 fba792250d35772b0001b90c2c465005 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Thivi_1808 fba792250d35772b0001b90c2c465005 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Thivi_1808 fba792250d35772b0001b90c2c465005 258 PIRSF PIRSF005902 1 258 5.0E-63 T 13-10-2018 IPR001130 TatD family GO:0016788 Thivi_1808 fba792250d35772b0001b90c2c465005 258 SUPERFAMILY SSF51556 3 257 1.98E-75 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_1808 fba792250d35772b0001b90c2c465005 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Thivi_3564 9c05f9076878551865c6edeaf13837b1 524 SUPERFAMILY SSF103473 17 510 9.16E-25 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_3564 9c05f9076878551865c6edeaf13837b1 524 Gene3D G3DSA:1.20.1250.20 2 197 1.2E-10 T 13-10-2018 Thivi_3564 9c05f9076878551865c6edeaf13837b1 524 Gene3D G3DSA:1.20.1250.20 319 510 5.9E-9 T 13-10-2018 Thivi_3564 9c05f9076878551865c6edeaf13837b1 524 Pfam PF07690 Major Facilitator Superfamily 35 306 3.9E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 SMART SM00283 373 634 1.9E-75 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 440 599 3.8E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 SUPERFAMILY SSF103190 55 184 1.45E-15 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 Pfam PF14827 Double sensory domain of two-component sensor kinase 40 269 1.7E-35 T 13-10-2018 IPR029150 Double Cache domain 3 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 Pfam PF00672 HAMP domain 304 354 5.6E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 SMART SM00304 304 358 5.7E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 SMART SM00304 359 411 15.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 SUPERFAMILY SSF58104 326 635 1.01E-73 T 13-10-2018 Thivi_0559 90b0fb5f4edb040b81a8eb74d31efb5a 635 Gene3D G3DSA:1.10.287.950 303 635 2.3E-72 T 13-10-2018 Thivi_3258 052268a1e50b43a6d9d0d98c1e5a9340 152 SUPERFAMILY SSF47188 1 141 4.19E-26 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Thivi_3258 052268a1e50b43a6d9d0d98c1e5a9340 152 Gene3D G3DSA:1.20.120.50 1 145 6.9E-27 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Thivi_3258 052268a1e50b43a6d9d0d98c1e5a9340 152 Pfam PF01814 Hemerythrin HHE cation binding domain 12 141 2.0E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Thivi_3258 052268a1e50b43a6d9d0d98c1e5a9340 152 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 141 8.3E-24 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 Gene3D G3DSA:1.10.10.10 137 201 1.1E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 Pfam PF00072 Response regulator receiver domain 9 118 2.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 SMART SM00421 142 199 1.1E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 Gene3D G3DSA:3.40.50.2300 1 129 2.3E-43 T 13-10-2018 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 SMART SM00448 5 118 3.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 4.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 4.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 4.1E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 SUPERFAMILY SSF46894 135 197 9.86E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 SUPERFAMILY SSF52172 9 153 7.26E-31 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0290 e5708275c703e52ff75de7be85c5d10a 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 196 9.1E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Thivi_3506 2849558167d786a847d881d8981da2e4 513 SUPERFAMILY SSF46955 1 61 4.12E-15 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_3506 2849558167d786a847d881d8981da2e4 513 Gene3D G3DSA:1.10.10.10 1 67 5.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3506 2849558167d786a847d881d8981da2e4 513 Pfam PF02316 Mu DNA-binding domain 10 60 2.0E-11 T 13-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Thivi_3506 2849558167d786a847d881d8981da2e4 513 Pfam PF00665 Integrase core domain 318 427 8.3E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_3506 2849558167d786a847d881d8981da2e4 513 Gene3D G3DSA:3.30.420.10 303 430 7.4E-37 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_3506 2849558167d786a847d881d8981da2e4 513 SUPERFAMILY SSF53098 315 423 6.98E-31 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2047 5477264bdd3fdd96ab235db26734a11c 394 Pfam PF13808 DDE_Tnp_1-associated 12 97 2.2E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_2047 5477264bdd3fdd96ab235db26734a11c 394 Pfam PF01609 Transposase DDE domain 107 343 1.4E-23 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 SUPERFAMILY SSF56918 3 46 1.33E-12 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 13 44 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 PIRSF PIRSF002900 1 46 6.0E-16 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 Gene3D G3DSA:1.20.5.250 2 46 6.8E-22 T 13-10-2018 Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 PRINTS PR00674 Light harvesting protein B chain signature 8 28 6.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 PRINTS PR00674 Light harvesting protein B chain signature 28 45 6.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1985 97f280716b4c17e19d0c39a831ce3b92 46 Pfam PF00556 Antenna complex alpha/beta subunit 12 46 6.5E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_4285 a64e333d46931309a6c4cdccf1eeae84 446 SUPERFAMILY SSF54862 36 99 7.78E-6 T 13-10-2018 Thivi_4285 a64e333d46931309a6c4cdccf1eeae84 446 Pfam PF02754 Cysteine-rich domain 209 294 4.3E-7 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_4285 a64e333d46931309a6c4cdccf1eeae84 446 Pfam PF02754 Cysteine-rich domain 341 417 0.12 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_2959 e6fcd3d125c18fb8b5f8839e0a74a7ba 164 Pfam PF01899 Na+/H+ ion antiporter subunit 14 160 5.1E-41 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Thivi_2959 e6fcd3d125c18fb8b5f8839e0a74a7ba 164 PIRSF PIRSF019239 2 163 3.6E-40 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 Gene3D G3DSA:3.40.50.720 4 316 2.7E-96 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 9.1E-31 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 9.1E-31 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.1E-31 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.1E-31 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 Gene3D G3DSA:3.90.25.10 180 328 2.7E-96 T 13-10-2018 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 240 1.6E-56 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Thivi_2513 bef0fb77ef08e3f9c4c48d35758380b5 335 SUPERFAMILY SSF51735 1 333 4.74E-91 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2480 c1c6f5701a1f700c9e6cd17fa966a58a 359 SUPERFAMILY SSF53756 15 355 9.42E-66 T 13-10-2018 Thivi_2480 c1c6f5701a1f700c9e6cd17fa966a58a 359 Gene3D G3DSA:3.40.50.2000 153 339 6.3E-51 T 13-10-2018 Thivi_2480 c1c6f5701a1f700c9e6cd17fa966a58a 359 Gene3D G3DSA:3.40.50.2000 16 349 6.3E-51 T 13-10-2018 Thivi_2480 c1c6f5701a1f700c9e6cd17fa966a58a 359 Pfam PF00534 Glycosyl transferases group 1 171 333 3.8E-28 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_0479 5a89a2f3dff66478c3eb0b69d24d8b97 282 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 267 8.2E-78 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Thivi_0479 5a89a2f3dff66478c3eb0b69d24d8b97 282 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Thivi_0479 5a89a2f3dff66478c3eb0b69d24d8b97 282 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 273 19.378 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Thivi_0479 5a89a2f3dff66478c3eb0b69d24d8b97 282 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 273 2.4E-78 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Thivi_0883 2c6bea794c105846d6d960bd3c409ab6 293 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 1.4E-30 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Thivi_0883 2c6bea794c105846d6d960bd3c409ab6 293 Gene3D G3DSA:3.40.50.720 3 278 1.8E-45 T 13-10-2018 Thivi_0883 2c6bea794c105846d6d960bd3c409ab6 293 SUPERFAMILY SSF51735 1 278 2.08E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0883 2c6bea794c105846d6d960bd3c409ab6 293 Gene3D G3DSA:3.90.25.10 170 262 1.8E-45 T 13-10-2018 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Gene3D G3DSA:1.10.357.20 305 479 1.4E-46 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Pfam PF00571 CBS domain 166 222 6.5E-7 T 13-10-2018 IPR000644 CBS domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Pfam PF00571 CBS domain 230 283 4.2E-5 T 13-10-2018 IPR000644 CBS domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SMART SM00924 63 166 1.1E-33 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Pfam PF01769 Divalent cation transporter 351 472 2.7E-27 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Pfam PF03448 MgtE intracellular N domain 63 164 2.5E-24 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SUPERFAMILY SSF161093 308 479 1.7E-48 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SMART SM00116 238 286 0.0026 T 13-10-2018 IPR000644 CBS domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SMART SM00116 173 226 0.051 T 13-10-2018 IPR000644 CBS domain Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SUPERFAMILY SSF54631 165 306 2.07E-28 T 13-10-2018 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 TIGRFAM TIGR00400 mgtE: magnesium transporter 47 479 1.6E-83 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 SUPERFAMILY SSF158791 43 163 3.53E-27 T 13-10-2018 Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Gene3D G3DSA:1.25.60.10 35 161 3.0E-18 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily Thivi_2440 debb424e9c624aecd7f6f832d1734648 480 Gene3D G3DSA:3.10.580.10 162 290 2.0E-38 T 13-10-2018 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 247 257 - T 13-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 SMART SM00645 92 295 1.1E-46 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 PRINTS PR00705 Papain cysteine protease (C1) family signature 262 268 1.4E-5 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 PRINTS PR00705 Papain cysteine protease (C1) family signature 110 125 1.4E-5 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 PRINTS PR00705 Papain cysteine protease (C1) family signature 249 259 1.4E-5 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 SUPERFAMILY SSF54001 93 296 1.54E-59 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 Pfam PF00112 Papain family cysteine protease 94 289 2.9E-48 T 13-10-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 110 121 - T 13-10-2018 IPR000169 Cysteine peptidase, cysteine active site Thivi_3711 ea2f93fd88286408fd084ee0ce3cd6f2 484 Gene3D G3DSA:3.90.70.10 14 301 1.4E-64 T 13-10-2018 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 179 18.149 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 Gene3D G3DSA:1.10.520.20 3 107 4.0E-29 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 139 158 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 8 177 3.4E-46 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 SUPERFAMILY SSF47928 5 106 7.45E-23 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 1.3E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 PRINTS PR00125 ATP synthase delta subunit signature 8 27 1.3E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 PRINTS PR00125 ATP synthase delta subunit signature 76 87 1.3E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 1.3E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 PRINTS PR00125 ATP synthase delta subunit signature 87 101 1.3E-21 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_2595 dc2119add4ab85ba2dc4487289f8852f 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 177 2.5E-40 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Thivi_3450 25078a552e86ef16f9579b9465b6b83a 235 Pfam PF13531 Bacterial extracellular solute-binding protein 21 234 1.6E-28 T 13-10-2018 Thivi_3450 25078a552e86ef16f9579b9465b6b83a 235 Gene3D G3DSA:3.40.190.10 25 234 1.1E-34 T 13-10-2018 Thivi_3450 25078a552e86ef16f9579b9465b6b83a 235 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 28 234 1.2E-22 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Thivi_3450 25078a552e86ef16f9579b9465b6b83a 235 Gene3D G3DSA:3.40.190.10 94 197 1.1E-34 T 13-10-2018 Thivi_3450 25078a552e86ef16f9579b9465b6b83a 235 SUPERFAMILY SSF53850 21 235 2.99E-39 T 13-10-2018 Thivi_2527 e7ff5e22af765da65e868bcac2ea9029 175 Gene3D G3DSA:1.20.1550.10 3 174 9.9E-32 T 13-10-2018 IPR023380 DsbB-like superfamily Thivi_2527 e7ff5e22af765da65e868bcac2ea9029 175 Pfam PF02600 Disulfide bond formation protein DsbB 7 161 5.5E-29 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Thivi_2527 e7ff5e22af765da65e868bcac2ea9029 175 SUPERFAMILY SSF158442 10 163 1.22E-22 T 13-10-2018 IPR023380 DsbB-like superfamily Thivi_2700 a0cc29d87b8ae7b53e79a63e8d04db88 426 Pfam PF13183 4Fe-4S dicluster domain 25 112 1.8E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2700 a0cc29d87b8ae7b53e79a63e8d04db88 426 Pfam PF02754 Cysteine-rich domain 307 393 4.2E-16 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_2700 a0cc29d87b8ae7b53e79a63e8d04db88 426 SUPERFAMILY SSF46548 16 127 1.46E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_2700 a0cc29d87b8ae7b53e79a63e8d04db88 426 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_2700 a0cc29d87b8ae7b53e79a63e8d04db88 426 Gene3D G3DSA:1.10.1060.10 14 131 2.3E-5 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_3326 4c8990232786012d5cdc679e25c3c453 326 SMART SM00220 17 287 2.6E-12 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_3326 4c8990232786012d5cdc679e25c3c453 326 Gene3D G3DSA:3.30.200.20 5 117 9.9E-44 T 13-10-2018 Thivi_3326 4c8990232786012d5cdc679e25c3c453 326 SUPERFAMILY SSF56112 11 302 4.86E-45 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3326 4c8990232786012d5cdc679e25c3c453 326 Gene3D G3DSA:1.10.510.10 118 286 9.9E-44 T 13-10-2018 Thivi_3326 4c8990232786012d5cdc679e25c3c453 326 Pfam PF00069 Protein kinase domain 17 242 3.8E-24 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Thivi_1070 c80f33d9feb87e024ec4bebf8e424089 525 Gene3D G3DSA:3.40.50.1820 45 270 7.1E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1070 c80f33d9feb87e024ec4bebf8e424089 525 Pfam PF12146 Serine aminopeptidase, S33 66 189 6.6E-15 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Thivi_1070 c80f33d9feb87e024ec4bebf8e424089 525 SUPERFAMILY SSF53474 46 194 1.51E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 Gene3D G3DSA:3.40.50.2300 2 129 2.0E-34 T 13-10-2018 Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 Pfam PF01966 HD domain 153 273 2.8E-19 T 13-10-2018 IPR006674 HD domain Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 SUPERFAMILY SSF109604 141 314 1.26E-39 T 13-10-2018 Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 Gene3D G3DSA:1.10.3210.10 130 326 1.1E-69 T 13-10-2018 Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 Pfam PF00072 Response regulator receiver domain 7 116 2.3E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 SUPERFAMILY SSF52172 5 138 2.85E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 SMART SM00471 146 283 1.7E-7 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1719 c2ce2ca69a181bc54813f518d351b9f6 329 SMART SM00448 4 116 4.1E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3890 eb10127152301c01e4aa6276c4f64816 457 Pfam PF13546 DDE superfamily endonuclease 28 294 4.3E-48 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_3890 eb10127152301c01e4aa6276c4f64816 457 SUPERFAMILY SSF53098 63 399 3.79E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 Gene3D G3DSA:3.30.565.10 361 581 1.6E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 500 3.5E-9 T 13-10-2018 Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 SUPERFAMILY SSF55874 373 541 1.07E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 PRINTS PR00775 90kDa heat shock protein signature 425 442 1.0E-12 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 PRINTS PR00775 90kDa heat shock protein signature 379 401 1.0E-12 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_1506 f47a889fa7b4cfe05d6ed35afd1b93d3 754 PRINTS PR00775 90kDa heat shock protein signature 472 494 1.0E-12 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Thivi_3567 add824fa8b39e5f376742bef69eb8353 732 Pfam PF03030 Inorganic H+ pyrophosphatase 14 722 4.8E-263 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_3567 add824fa8b39e5f376742bef69eb8353 732 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 8 729 1.7E-224 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_3567 add824fa8b39e5f376742bef69eb8353 732 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 3 727 24.168 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_3567 add824fa8b39e5f376742bef69eb8353 732 PIRSF PIRSF001265 1 732 7.1E-257 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 45 590 5.5E-143 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 Gene3D G3DSA:3.90.1640.30 68 345 1.5E-83 T 13-10-2018 Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 SUPERFAMILY SSF64182 71 485 6.67E-114 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 Pfam PF02272 DHHA1 domain 341 472 4.9E-22 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 Pfam PF01368 DHH family 95 227 1.4E-8 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Thivi_0758 e338177191a6e12472f57fc6d12a4e2a 594 Gene3D G3DSA:3.10.310.30 347 476 3.0E-29 T 13-10-2018 Thivi_2689 6feb8185c685cfc5d604105195ff8cf1 410 Gene3D G3DSA:3.40.50.2000 189 387 5.8E-38 T 13-10-2018 Thivi_2689 6feb8185c685cfc5d604105195ff8cf1 410 Gene3D G3DSA:3.40.50.2000 17 396 5.8E-38 T 13-10-2018 Thivi_2689 6feb8185c685cfc5d604105195ff8cf1 410 Pfam PF12000 Gkycosyl transferase family 4 group 24 192 1.2E-67 T 13-10-2018 IPR022623 Domain of unknown function DUF3495 Thivi_2689 6feb8185c685cfc5d604105195ff8cf1 410 SUPERFAMILY SSF53756 17 397 7.85E-47 T 13-10-2018 Thivi_2689 6feb8185c685cfc5d604105195ff8cf1 410 Pfam PF00534 Glycosyl transferases group 1 214 385 7.3E-18 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_1894 002a72a0599f14164e1a8885324013d3 193 SUPERFAMILY SSF103088 65 187 4.58E-18 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1894 002a72a0599f14164e1a8885324013d3 193 Pfam PF00691 OmpA family 85 169 1.3E-14 T 13-10-2018 IPR006665 OmpA-like domain Thivi_1894 002a72a0599f14164e1a8885324013d3 193 Gene3D G3DSA:3.30.1330.60 66 191 1.1E-21 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1894 002a72a0599f14164e1a8885324013d3 193 PRINTS PR01021 OMPA domain signature 135 151 3.1E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_1894 002a72a0599f14164e1a8885324013d3 193 PRINTS PR01021 OMPA domain signature 120 135 3.1E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_2470 47e926423e247a617063499f195fa1fb 170 Pfam PF00436 Single-strand binding protein family 4 110 2.5E-42 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Thivi_2470 47e926423e247a617063499f195fa1fb 170 SUPERFAMILY SSF50249 3 170 1.13E-59 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2470 47e926423e247a617063499f195fa1fb 170 Gene3D G3DSA:2.40.50.140 2 156 8.1E-50 T 13-10-2018 Thivi_2470 47e926423e247a617063499f195fa1fb 170 Hamap MF_00984 Single-stranded DNA-binding protein. 4 115 39.251 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Thivi_2470 47e926423e247a617063499f195fa1fb 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 170 6.1E-56 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Thivi_4012 e74ed6d54252cafb7949c28c963e1d24 105 Pfam PF00893 Small Multidrug Resistance protein 1 94 3.4E-23 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Thivi_4012 e74ed6d54252cafb7949c28c963e1d24 105 SUPERFAMILY SSF103481 4 103 3.27E-17 T 13-10-2018 Thivi_4012 e74ed6d54252cafb7949c28c963e1d24 105 Gene3D G3DSA:1.10.3730.20 1 105 4.8E-27 T 13-10-2018 Thivi_4515 94c19b59354b4f16cae3897ff039ba9a 189 Pfam PF05685 Putative restriction endonuclease 10 171 4.3E-33 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_4515 94c19b59354b4f16cae3897ff039ba9a 189 SUPERFAMILY SSF52980 8 163 2.52E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_4515 94c19b59354b4f16cae3897ff039ba9a 189 Gene3D G3DSA:3.90.1570.10 5 188 4.4E-16 T 13-10-2018 Thivi_2429 1058231fab9f4533513ecdcc4dbb0c6d 193 Pfam PF12867 DinB superfamily 78 185 1.2E-5 T 13-10-2018 IPR024775 DinB-like domain Thivi_2429 1058231fab9f4533513ecdcc4dbb0c6d 193 SUPERFAMILY SSF109854 80 192 5.8E-11 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Thivi_2429 1058231fab9f4533513ecdcc4dbb0c6d 193 Gene3D G3DSA:1.20.120.450 37 191 2.2E-23 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 Pfam PF01409 tRNA synthetases class II core domain (F) 97 342 1.6E-103 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 44 342 2.5E-102 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 13 342 49.122 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 SUPERFAMILY SSF46589 17 104 1.57E-19 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 SUPERFAMILY SSF55681 97 342 2.26E-82 T 13-10-2018 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 25 92 1.6E-23 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Thivi_1561 38294abc80e9c52b3c03cff327c140ab 343 Gene3D G3DSA:3.30.930.10 13 343 4.6E-117 T 13-10-2018 Thivi_3203 df9a457fc7dfbc76e08dbb84a6212563 501 Gene3D G3DSA:1.10.3210.10 19 266 1.3E-46 T 13-10-2018 Thivi_3203 df9a457fc7dfbc76e08dbb84a6212563 501 SUPERFAMILY SSF55781 350 489 4.17E-7 T 13-10-2018 Thivi_3203 df9a457fc7dfbc76e08dbb84a6212563 501 SUPERFAMILY SSF109604 16 271 2.07E-44 T 13-10-2018 Thivi_3203 df9a457fc7dfbc76e08dbb84a6212563 501 Gene3D G3DSA:3.30.450.40 342 493 4.4E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_3203 df9a457fc7dfbc76e08dbb84a6212563 501 Pfam PF08668 HDOD domain 22 213 8.0E-37 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 646 48.671 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 Pfam PF11842 Domain of unknown function (DUF3362) 594 714 8.0E-49 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 SMART SM00729 376 626 7.5E-5 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 SUPERFAMILY SSF102114 365 612 1.15E-9 T 13-10-2018 Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 Pfam PF08497 Radical SAM N-terminal 24 379 2.5E-138 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 644 4.9E-251 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 Pfam PF04055 Radical SAM superfamily 380 585 5.2E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2207 dfed05232d80124ac8a9349f6997aa01 720 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 Pfam PF03958 Bacterial type II/III secretion system short domain 355 473 2.4E-12 T 13-10-2018 IPR005644 NolW-like Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 Pfam PF03958 Bacterial type II/III secretion system short domain 279 346 4.3E-8 T 13-10-2018 IPR005644 NolW-like Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 474 484 7.6E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 579 589 7.6E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 677 695 7.6E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 700 714 7.6E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 PRINTS PR00811 Bacterial general secretion pathway protein D signature 544 568 7.6E-16 T 13-10-2018 IPR001775 GspD/PilQ family Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 Gene3D G3DSA:3.30.1370.120 278 344 1.4E-7 T 13-10-2018 IPR038591 NolW-like superfamily Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 Gene3D G3DSA:3.30.1370.120 111 268 8.2E-29 T 13-10-2018 IPR038591 NolW-like superfamily Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 Pfam PF00263 Bacterial type II and III secretion system protein 548 712 2.4E-48 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 Thivi_2865 40939b045ea9ad34bcbc630dd9e6d66e 736 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 114 722 1.7E-147 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 PRINTS PR00095 Anthranilate synthase component I signature 322 335 1.1E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 PRINTS PR00095 Anthranilate synthase component I signature 416 430 1.1E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 PRINTS PR00095 Anthranilate synthase component I signature 431 445 1.1E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 PRINTS PR00095 Anthranilate synthase component I signature 336 349 1.1E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 Pfam PF00425 chorismate binding enzyme 221 474 1.8E-98 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 Gene3D G3DSA:3.60.120.10 1 490 1.9E-182 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 8.5E-35 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 482 2.0E-172 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3479 68d9018ee18aec2027bb6bc646487b96 499 SUPERFAMILY SSF56322 14 482 2.35E-162 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 Gene3D G3DSA:3.90.1150.10 257 392 1.8E-43 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 7 385 2.4E-167 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 SUPERFAMILY SSF53383 23 389 6.38E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 388 6.2E-132 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 8 389 53.772 T 13-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 Gene3D G3DSA:3.40.640.10 2 254 5.2E-92 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0657 6c0c0aef2721229917b1c0ff2fb15939 393 PIRSF PIRSF001434 1 392 7.7E-127 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_1752 1ae988a423d3ff85fc912d77f62a05f0 450 SUPERFAMILY SSF56954 1 427 2.22E-89 T 13-10-2018 Thivi_1752 1ae988a423d3ff85fc912d77f62a05f0 450 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 440 1.9E-103 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Thivi_1752 1ae988a423d3ff85fc912d77f62a05f0 450 Pfam PF02321 Outer membrane efflux protein 29 218 3.7E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Thivi_1752 1ae988a423d3ff85fc912d77f62a05f0 450 Pfam PF02321 Outer membrane efflux protein 243 424 1.7E-35 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Thivi_1752 1ae988a423d3ff85fc912d77f62a05f0 450 Gene3D G3DSA:1.20.1600.10 24 445 1.6E-111 T 13-10-2018 Thivi_2897 ec95cb9c34859d14257ef8ac631ee6ee 236 Pfam PF02390 Putative methyltransferase 60 229 3.4E-54 T 13-10-2018 Thivi_2897 ec95cb9c34859d14257ef8ac631ee6ee 236 Gene3D G3DSA:3.40.50.150 27 236 3.1E-67 T 13-10-2018 Thivi_2897 ec95cb9c34859d14257ef8ac631ee6ee 236 SUPERFAMILY SSF53335 10 235 6.62E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2897 ec95cb9c34859d14257ef8ac631ee6ee 236 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 51 235 7.3E-56 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Thivi_2897 ec95cb9c34859d14257ef8ac631ee6ee 236 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 20 236 30.768 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Thivi_1172 5aeab41f2a0f74855f864188e6e4b7b2 562 SUPERFAMILY SSF52540 157 528 4.69E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1172 5aeab41f2a0f74855f864188e6e4b7b2 562 Pfam PF01935 Domain of unknown function DUF87 144 389 7.8E-37 T 13-10-2018 IPR002789 Helicase HerA, central domain Thivi_1172 5aeab41f2a0f74855f864188e6e4b7b2 562 Gene3D G3DSA:3.40.50.300 348 536 2.1E-42 T 13-10-2018 Thivi_1172 5aeab41f2a0f74855f864188e6e4b7b2 562 Gene3D G3DSA:3.40.50.300 130 314 1.2E-16 T 13-10-2018 Thivi_3812 4fd34a55cd51041eb4c95c1c4c3424fa 338 PIRSF PIRSF000164 1 309 7.1E-37 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Thivi_3812 4fd34a55cd51041eb4c95c1c4c3424fa 338 SUPERFAMILY SSF51395 1 307 6.66E-54 T 13-10-2018 Thivi_3812 4fd34a55cd51041eb4c95c1c4c3424fa 338 Gene3D G3DSA:3.20.20.70 3 298 1.3E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3812 4fd34a55cd51041eb4c95c1c4c3424fa 338 Pfam PF01180 Dihydroorotate dehydrogenase 3 292 1.1E-8 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 Pfam PF04851 Type III restriction enzyme, res subunit 300 518 1.3E-17 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 SMART SM00487 297 554 8.3E-10 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 18 231 4.2E-29 T 13-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 Gene3D G3DSA:3.40.50.300 576 816 1.2E-24 T 13-10-2018 Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 Gene3D G3DSA:3.90.1570.50 116 296 1.7E-18 T 13-10-2018 Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 SUPERFAMILY SSF52540 265 525 2.33E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1542 868a13cfa385f94982ad07e950a3533f 1126 Gene3D G3DSA:3.40.50.300 301 537 5.5E-46 T 13-10-2018 Thivi_3726 42f9bf9f86bc392a7c8f6e941cc3989c 261 Gene3D G3DSA:3.60.40.10 3 256 1.3E-63 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_3726 42f9bf9f86bc392a7c8f6e941cc3989c 261 Pfam PF13672 Protein phosphatase 2C 22 236 1.9E-20 T 13-10-2018 Thivi_3726 42f9bf9f86bc392a7c8f6e941cc3989c 261 SMART SM00332 6 252 2.0E-17 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_3726 42f9bf9f86bc392a7c8f6e941cc3989c 261 SUPERFAMILY SSF81606 10 254 1.01E-59 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_3726 42f9bf9f86bc392a7c8f6e941cc3989c 261 SMART SM00331 17 254 2.0E-22 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 262 1.4E-23 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 Gene3D G3DSA:1.10.287.470 98 157 9.2E-68 T 13-10-2018 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 Gene3D G3DSA:2.40.50.100 63 191 9.2E-68 T 13-10-2018 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 Gene3D G3DSA:2.40.30.170 52 273 9.2E-68 T 13-10-2018 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 SUPERFAMILY SSF111369 53 268 1.96E-32 T 13-10-2018 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 347 2.6E-68 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_2767 b0f80d2ae2e51e7a4f62c07be91fb2e0 367 Gene3D G3DSA:2.40.420.20 274 344 9.2E-68 T 13-10-2018 Thivi_1747 b2ff5cd6e5bdaab6c5b6ba808479f3f0 566 Pfam PF00999 Sodium/hydrogen exchanger family 11 378 9.9E-65 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Thivi_1747 b2ff5cd6e5bdaab6c5b6ba808479f3f0 566 Gene3D G3DSA:3.40.50.720 408 565 3.0E-33 T 13-10-2018 Thivi_1747 b2ff5cd6e5bdaab6c5b6ba808479f3f0 566 Gene3D G3DSA:1.20.1530.20 4 388 2.0E-79 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Thivi_1747 b2ff5cd6e5bdaab6c5b6ba808479f3f0 566 Pfam PF02254 TrkA-N domain 411 523 8.2E-21 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_1747 b2ff5cd6e5bdaab6c5b6ba808479f3f0 566 SUPERFAMILY SSF51735 408 549 4.75E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Gene3D G3DSA:1.10.420.20 191 397 1.5E-218 T 13-10-2018 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.0E-49 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.0E-49 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.0E-49 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 2.0E-49 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.0E-49 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 SUPERFAMILY SSF48113 17 431 3.09E-152 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Pfam PF00141 Peroxidase 71 398 3.0E-50 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Pfam PF00141 Peroxidase 406 698 5.2E-40 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 39.851 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Gene3D G3DSA:1.10.420.10 578 699 5.3E-147 T 13-10-2018 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.8E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.8E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.8E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.8E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.8E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Gene3D G3DSA:1.10.520.10 433 723 5.3E-147 T 13-10-2018 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 SUPERFAMILY SSF48113 432 723 7.81E-114 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Thivi_1729 388b49827829b6195c84645fe81c33c1 724 Gene3D G3DSA:1.10.520.10 28 432 1.5E-218 T 13-10-2018 Thivi_1492 b95871a6da6a407b2a12970eaa2e2cdd 203 SUPERFAMILY SSF51735 1 202 1.43E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1492 b95871a6da6a407b2a12970eaa2e2cdd 203 Gene3D G3DSA:3.40.50.720 1 203 1.7E-55 T 13-10-2018 Thivi_1492 b95871a6da6a407b2a12970eaa2e2cdd 203 Pfam PF13460 NAD(P)H-binding 7 193 1.6E-54 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 41.012 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 SUPERFAMILY SSF64005 15 240 1.57E-86 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 Gene3D G3DSA:3.40.1180.10 5 245 3.5E-92 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 244 6.1E-91 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Thivi_2749 e403bc9f9a4813ff2e03d0ecb0a15fc4 263 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 5.3E-78 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Thivi_4375 148b6b935feb8c5d95a2f82c333e09a6 545 SUPERFAMILY SSF53098 152 331 1.34E-12 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4375 148b6b935feb8c5d95a2f82c333e09a6 545 Gene3D G3DSA:3.30.420.10 151 345 4.8E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_1803 338252ab9e9d8e5fd3148bcea9e94b82 178 Gene3D G3DSA:1.20.1260.10 1 177 4.4E-38 T 13-10-2018 IPR012347 Ferritin-like Thivi_1803 338252ab9e9d8e5fd3148bcea9e94b82 178 Pfam PF00210 Ferritin-like domain 9 142 9.1E-34 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Thivi_1803 338252ab9e9d8e5fd3148bcea9e94b82 178 SUPERFAMILY SSF47240 1 159 1.58E-46 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_3045 65eb57e4ddc1eb2a33ef7bb9e8c00a36 346 Pfam PF12849 PBP superfamily domain 19 308 2.7E-44 T 13-10-2018 IPR024370 PBP domain Thivi_3045 65eb57e4ddc1eb2a33ef7bb9e8c00a36 346 SUPERFAMILY SSF53850 25 336 1.71E-70 T 13-10-2018 Thivi_3045 65eb57e4ddc1eb2a33ef7bb9e8c00a36 346 Gene3D G3DSA:3.40.190.10 26 308 1.8E-56 T 13-10-2018 Thivi_3045 65eb57e4ddc1eb2a33ef7bb9e8c00a36 346 Gene3D G3DSA:3.40.190.10 111 281 1.8E-56 T 13-10-2018 Thivi_0135 306dfca6c18fc53f5e0ce3987419c55b 379 Gene3D G3DSA:3.40.50.2000 21 184 1.6E-8 T 13-10-2018 Thivi_0135 306dfca6c18fc53f5e0ce3987419c55b 379 Pfam PF13579 Glycosyl transferase 4-like domain 23 167 1.3E-10 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_0135 306dfca6c18fc53f5e0ce3987419c55b 379 Pfam PF13692 Glycosyl transferases group 1 205 337 2.1E-10 T 13-10-2018 Thivi_0135 306dfca6c18fc53f5e0ce3987419c55b 379 Gene3D G3DSA:3.40.50.2000 185 345 3.4E-21 T 13-10-2018 Thivi_0135 306dfca6c18fc53f5e0ce3987419c55b 379 SUPERFAMILY SSF53756 24 366 3.1E-35 T 13-10-2018 Thivi_1718 3cfb4dffc76effec26b12348125d4d77 376 Gene3D G3DSA:3.40.50.12740 6 200 7.8E-33 T 13-10-2018 Thivi_1718 3cfb4dffc76effec26b12348125d4d77 376 SUPERFAMILY SSF52172 7 145 1.2E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1718 3cfb4dffc76effec26b12348125d4d77 376 SMART SM00448 7 120 3.8E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1718 3cfb4dffc76effec26b12348125d4d77 376 Pfam PF00072 Response regulator receiver domain 9 119 1.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4265 811803862542eb537e65c6b4faf9fe7f 248 Pfam PF01590 GAF domain 25 167 1.6E-13 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4265 811803862542eb537e65c6b4faf9fe7f 248 Gene3D G3DSA:3.30.450.40 7 179 2.9E-24 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_4265 811803862542eb537e65c6b4faf9fe7f 248 SUPERFAMILY SSF55781 8 192 1.59E-27 T 13-10-2018 Thivi_4265 811803862542eb537e65c6b4faf9fe7f 248 SMART SM00065 25 177 3.6E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_3222 54753bf258a852ae66d0138e32c8f7b0 134 Pfam PF01850 PIN domain 4 128 6.2E-15 T 13-10-2018 IPR002716 PIN domain Thivi_3222 54753bf258a852ae66d0138e32c8f7b0 134 SUPERFAMILY SSF88723 4 133 2.3E-21 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_3222 54753bf258a852ae66d0138e32c8f7b0 134 Gene3D G3DSA:3.40.50.1010 1 132 1.8E-29 T 13-10-2018 Thivi_3222 54753bf258a852ae66d0138e32c8f7b0 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 134 12.019 T 13-10-2018 IPR022907 VapC family GO:0004540 Thivi_3724 2f80938b990703120cd383e4902e8834 160 Gene3D G3DSA:3.30.70.990 9 94 6.9E-30 T 13-10-2018 IPR035570 UPF0234, N-terminal Thivi_3724 2f80938b990703120cd383e4902e8834 160 SUPERFAMILY SSF89963 88 160 6.02E-29 T 13-10-2018 IPR036183 YajQ-like superfamily Thivi_3724 2f80938b990703120cd383e4902e8834 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 9.8E-66 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Thivi_3724 2f80938b990703120cd383e4902e8834 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.477 T 13-10-2018 IPR007551 Protein of unknown function DUF520 Thivi_3724 2f80938b990703120cd383e4902e8834 160 Gene3D G3DSA:3.30.70.860 95 160 4.8E-31 T 13-10-2018 IPR035571 UPF0234-like, C-terminal Thivi_3724 2f80938b990703120cd383e4902e8834 160 SUPERFAMILY SSF89963 2 83 9.15E-31 T 13-10-2018 IPR036183 YajQ-like superfamily Thivi_3921 c164a4ece2b8e757f53cfc6ef0d1e09f 219 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 164 1.5E-35 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3921 c164a4ece2b8e757f53cfc6ef0d1e09f 219 Gene3D G3DSA:1.20.120.1200 4 166 8.1E-43 T 13-10-2018 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 SUPERFAMILY SSF52540 23 255 9.38E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Gene3D G3DSA:1.10.10.10 260 338 2.1E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 SMART SM00382 54 181 5.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-32 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Gene3D G3DSA:3.40.50.300 23 184 5.8E-36 T 13-10-2018 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.1E-146 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Gene3D G3DSA:1.10.8.60 185 259 6.9E-31 T 13-10-2018 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.3E-33 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 350 179.707 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.3E-117 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Thivi_1575 0c67074d429e9d935b3d4c1819d843b4 350 SUPERFAMILY SSF46785 259 333 1.11E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1185 ae91e5d03508491726b7eda65088049a 128 Pfam PF01250 Ribosomal protein S6 3 90 8.1E-27 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1185 ae91e5d03508491726b7eda65088049a 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.171 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Thivi_1185 ae91e5d03508491726b7eda65088049a 128 Gene3D G3DSA:3.30.70.60 1 91 1.8E-30 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Thivi_1185 ae91e5d03508491726b7eda65088049a 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 91 2.8E-34 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1185 ae91e5d03508491726b7eda65088049a 128 SUPERFAMILY SSF54995 1 102 2.62E-36 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1136 7c030fa6321d96b52d3c288c0f566317 199 SUPERFAMILY SSF52218 1 194 2.23E-59 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1136 7c030fa6321d96b52d3c288c0f566317 199 Gene3D G3DSA:3.40.50.360 1 195 1.2E-63 T 13-10-2018 IPR029039 Flavoprotein-like superfamily Thivi_1136 7c030fa6321d96b52d3c288c0f566317 199 Pfam PF03358 NADPH-dependent FMN reductase 11 127 1.4E-7 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Thivi_1136 7c030fa6321d96b52d3c288c0f566317 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 194 4.9E-40 T 13-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Thivi_1136 7c030fa6321d96b52d3c288c0f566317 199 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 23.283 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 Gene3D G3DSA:3.30.420.140 1 136 4.0E-41 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 Pfam PF03652 Holliday junction resolvase 3 134 2.9E-39 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 133 1.9E-39 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 SMART SM00732 2 102 3.8E-30 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Thivi_3312 c36e9c638d987de797daf9c91325b75c 137 SUPERFAMILY SSF53098 2 134 3.34E-38 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2508 c15b019d6d0c0d75d3bfbbf7f7e2f828 179 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Thivi_2508 c15b019d6d0c0d75d3bfbbf7f7e2f828 179 SUPERFAMILY SSF55811 4 175 1.9E-36 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Thivi_2508 c15b019d6d0c0d75d3bfbbf7f7e2f828 179 Pfam PF00293 NUDIX domain 45 162 1.3E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Thivi_2508 c15b019d6d0c0d75d3bfbbf7f7e2f828 179 Gene3D G3DSA:3.90.79.10 5 178 8.2E-42 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.3E-16 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.3E-16 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 1.3E-16 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.3E-16 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 Gene3D G3DSA:3.30.9.50 84 273 8.8E-114 T 13-10-2018 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 394 2.5E-135 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 SUPERFAMILY SSF51905 8 389 3.79E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 Pfam PF01494 FAD binding domain 9 342 3.1E-25 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Thivi_3383 043d25eb9827e4d95256d6a537d03834 409 Gene3D G3DSA:3.50.50.60 9 342 8.8E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1885 d2ddac522e56ff602989d0a5e55cf778 188 SUPERFAMILY SSF82784 10 186 3.4E-41 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Thivi_1885 d2ddac522e56ff602989d0a5e55cf778 188 Pfam PF02566 OsmC-like protein 81 185 3.7E-19 T 13-10-2018 IPR003718 OsmC/Ohr family Thivi_1885 d2ddac522e56ff602989d0a5e55cf778 188 Gene3D G3DSA:3.30.300.20 3 177 6.2E-48 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_2589 6e25725c0d2d143493804eba36152137 455 Gene3D G3DSA:3.90.550.10 1 225 1.4E-64 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2589 6e25725c0d2d143493804eba36152137 455 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.8E-27 T 13-10-2018 IPR025877 MobA-like NTP transferase Thivi_2589 6e25725c0d2d143493804eba36152137 455 SUPERFAMILY SSF53448 1 250 4.8E-64 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2589 6e25725c0d2d143493804eba36152137 455 Gene3D G3DSA:2.160.10.10 226 454 1.2E-63 T 13-10-2018 Thivi_2589 6e25725c0d2d143493804eba36152137 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 1.5E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2589 6e25725c0d2d143493804eba36152137 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 298 331 1.7E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2589 6e25725c0d2d143493804eba36152137 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 453 1.3E-187 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Thivi_2589 6e25725c0d2d143493804eba36152137 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 42.208 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Thivi_2589 6e25725c0d2d143493804eba36152137 455 SUPERFAMILY SSF51161 256 434 2.36E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 Pfam PF00664 ABC transporter transmembrane region 21 265 2.4E-34 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 SMART SM00382 372 558 1.1E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 17 554 1.9E-201 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 SUPERFAMILY SSF90123 18 329 3.4E-51 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 Gene3D G3DSA:3.40.50.300 342 593 2.1E-86 T 13-10-2018 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 Gene3D G3DSA:1.20.1560.10 4 333 2.0E-50 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 SUPERFAMILY SSF52540 344 580 2.0E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_4312 cee60cda89f72dbcbc99eb1c970d322b 599 Pfam PF00005 ABC transporter 365 512 3.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 121 3.2E-16 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 67 120 4.6E-19 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 4.7E-21 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 4.7E-21 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 4.7E-21 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 4.7E-21 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 Gene3D G3DSA:1.20.5.1030 64 121 3.6E-16 T 13-10-2018 IPR038379 SecE superfamily Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_4188 be2ec6046b3c5914b118fca382ebdc9c 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 60 119 12.203 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 Gene3D G3DSA:3.90.220.20 175 331 2.2E-70 T 13-10-2018 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 Gene3D G3DSA:1.10.287.1120 119 374 2.2E-70 T 13-10-2018 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 Pfam PF01420 Type I restriction modification DNA specificity domain 29 140 1.1E-8 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 Pfam PF01420 Type I restriction modification DNA specificity domain 173 352 1.5E-12 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 Gene3D G3DSA:3.90.220.20 2 378 2.2E-70 T 13-10-2018 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 SUPERFAMILY SSF116734 1 172 7.68E-33 T 13-10-2018 Thivi_2879 0e1bd0106897a764c9abd754fd87c457 380 SUPERFAMILY SSF116734 163 379 2.29E-32 T 13-10-2018 Thivi_4201 205011a62e2468487504fd959d2d47ad 216 Gene3D G3DSA:2.40.50.620 33 99 1.8E-16 T 13-10-2018 Thivi_4201 205011a62e2468487504fd959d2d47ad 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site Thivi_4201 205011a62e2468487504fd959d2d47ad 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.924 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4201 205011a62e2468487504fd959d2d47ad 216 Gene3D G3DSA:2.40.30.10 131 213 2.3E-15 T 13-10-2018 Thivi_4201 205011a62e2468487504fd959d2d47ad 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 2.2E-86 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4201 205011a62e2468487504fd959d2d47ad 216 SUPERFAMILY SSF50447 1 214 4.33E-78 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4201 205011a62e2468487504fd959d2d47ad 216 Pfam PF00297 Ribosomal protein L3 68 185 1.7E-15 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 SMART SM00460 417 488 3.3E-13 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 Pfam PF13559 Domain of unknown function (DUF4129) 619 680 6.4E-10 T 13-10-2018 IPR025403 Domain of unknown function DUF4129 Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 Pfam PF01841 Transglutaminase-like superfamily 372 486 5.9E-19 T 13-10-2018 IPR002931 Transglutaminase-like Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 Gene3D G3DSA:3.10.620.30 353 511 1.1E-11 T 13-10-2018 Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 Pfam PF11992 Domain of unknown function (DUF3488) 6 330 1.4E-75 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 Thivi_0155 a4aa6cff0a3232337f2354ab47fb709f 693 SUPERFAMILY SSF54001 297 640 1.54E-30 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 Gene3D G3DSA:3.90.640.10 208 281 2.7E-126 T 13-10-2018 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 SUPERFAMILY SSF53067 27 170 3.73E-35 T 13-10-2018 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 Pfam PF06723 MreB/Mbl protein 29 356 1.9E-144 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 SUPERFAMILY SSF53067 174 355 1.85E-47 T 13-10-2018 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 Gene3D G3DSA:3.30.420.40 176 339 2.7E-126 T 13-10-2018 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 27 356 1.2E-154 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 88 8.9E-60 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 154 173 8.9E-60 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 209 229 8.9E-60 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 90 113 8.9E-60 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 322 348 8.9E-60 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Thivi_3826 01fb218a4a85024b3ba513a2345d71b1 365 Gene3D G3DSA:3.30.420.40 32 349 2.7E-126 T 13-10-2018 Thivi_1711 5e30ede755bd391b2d51a4ee6e94ba4e 864 TIGRFAM TIGR04096 dnd_rel_methyl: DNA phosphorothioation-associated putative methyltransferase 183 680 1.5E-151 T 13-10-2018 IPR024019 Conserved hypothetical protein CHP04096 Thivi_1711 5e30ede755bd391b2d51a4ee6e94ba4e 864 SUPERFAMILY SSF53335 206 328 5.35E-5 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1711 5e30ede755bd391b2d51a4ee6e94ba4e 864 SUPERFAMILY SSF55166 713 833 1.26E-10 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 Gene3D G3DSA:1.10.10.350 365 467 5.5E-23 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 SUPERFAMILY SSF48163 297 461 3.27E-38 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 Gene3D G3DSA:3.40.50.620 1 312 1.1E-134 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 SUPERFAMILY SSF52374 3 296 1.66E-112 T 13-10-2018 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 303 5.9E-109 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.184 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 1.7E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.7E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 1.7E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.7E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.7E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_3840 1221757dfdd75daf306d2618c41b5022 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 459 5.5E-176 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Thivi_1192 70ca35f44b2d838d27f2d370155e6e88 138 SUPERFAMILY SSF88723 5 130 3.08E-22 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_1192 70ca35f44b2d838d27f2d370155e6e88 138 Pfam PF01850 PIN domain 6 129 7.2E-12 T 13-10-2018 IPR002716 PIN domain Thivi_1192 70ca35f44b2d838d27f2d370155e6e88 138 Gene3D G3DSA:3.40.50.1010 4 137 8.6E-32 T 13-10-2018 Thivi_2072 2f533090a307b5afd9419ab91d538050 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.154 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Thivi_2072 2f533090a307b5afd9419ab91d538050 145 Gene3D G3DSA:3.50.80.10 1 145 4.5E-50 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Thivi_2072 2f533090a307b5afd9419ab91d538050 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 144 1.7E-49 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Thivi_2072 2f533090a307b5afd9419ab91d538050 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 2.4E-50 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Thivi_2072 2f533090a307b5afd9419ab91d538050 145 SUPERFAMILY SSF69500 4 144 1.24E-49 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 177 194 1.3E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 205 218 1.3E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 126 137 1.3E-13 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 SUPERFAMILY SSF56601 25 341 1.25E-47 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 97 322 9.5E-47 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Thivi_0442 b2b2d3dd04efacb58ba0d57e2d8090d2 348 Gene3D G3DSA:3.40.710.10 74 348 2.9E-57 T 13-10-2018 Thivi_3600 d37e7b1374111664bfefdf0a219011db 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 1.8E-44 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Thivi_3600 d37e7b1374111664bfefdf0a219011db 129 SUPERFAMILY SSF54211 6 129 2.84E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3600 d37e7b1374111664bfefdf0a219011db 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Thivi_3600 d37e7b1374111664bfefdf0a219011db 129 Gene3D G3DSA:3.30.230.10 2 129 8.1E-50 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3600 d37e7b1374111664bfefdf0a219011db 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 29.036 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Thivi_1370 2de641313bac3cf604a8d35927e32ddc 352 Gene3D G3DSA:3.40.1090.10 130 252 3.4E-11 T 13-10-2018 Thivi_1370 2de641313bac3cf604a8d35927e32ddc 352 Gene3D G3DSA:3.40.1090.10 10 105 2.2E-12 T 13-10-2018 Thivi_1370 2de641313bac3cf604a8d35927e32ddc 352 SUPERFAMILY SSF52151 23 338 8.89E-48 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_1370 2de641313bac3cf604a8d35927e32ddc 352 Pfam PF01734 Patatin-like phospholipase 24 217 1.1E-16 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Thivi_3064 450908f147c0bf770b2ff8327ec6467a 452 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 122 8.0E-28 T 13-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Thivi_3064 450908f147c0bf770b2ff8327ec6467a 452 SUPERFAMILY SSF48452 156 267 6.03E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3064 450908f147c0bf770b2ff8327ec6467a 452 Gene3D G3DSA:1.25.40.10 152 297 6.5E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 Gene3D G3DSA:3.40.30.10 39 143 1.6E-27 T 13-10-2018 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 SUPERFAMILY SSF52833 29 141 2.78E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 Gene3D G3DSA:2.20.28.140 2 38 6.3E-13 T 13-10-2018 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 Pfam PF00085 Thioredoxin 43 140 2.8E-26 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 139 4.6E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 PIRSF PIRSF000077 39 142 2.4E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 PRINTS PR00421 Thioredoxin family signature 60 68 3.0E-9 T 13-10-2018 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 PRINTS PR00421 Thioredoxin family signature 108 119 3.0E-9 T 13-10-2018 Thivi_0835 af69ce671aae1560a39893c31e857fd1 143 PRINTS PR00421 Thioredoxin family signature 68 77 3.0E-9 T 13-10-2018 Thivi_4352 1e32772be3fa213c442499bf1a91c08a 373 SMART SM00897 31 218 2.0E-27 T 13-10-2018 IPR013702 FIST domain, N-terminal Thivi_4352 1e32772be3fa213c442499bf1a91c08a 373 Pfam PF08495 FIST N domain 34 217 5.3E-25 T 13-10-2018 IPR013702 FIST domain, N-terminal Thivi_4352 1e32772be3fa213c442499bf1a91c08a 373 Pfam PF10442 FIST C domain 219 357 1.8E-30 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Thivi_4352 1e32772be3fa213c442499bf1a91c08a 373 SMART SM01204 219 359 1.9E-38 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Thivi_4352 1e32772be3fa213c442499bf1a91c08a 373 PIRSF PIRSF018953 8 373 3.4E-58 T 13-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 Gene3D G3DSA:3.90.1150.10 289 424 1.3E-50 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 PIRSF PIRSF001434 1 424 1.6E-129 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 SUPERFAMILY SSF53383 1 422 3.72E-125 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 422 2.3E-197 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 Gene3D G3DSA:3.40.640.10 1 285 4.6E-98 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_4020 4a191971b40cadf0b553ee01af5bd062 424 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 421 4.3E-141 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 Gene3D G3DSA:3.20.20.70 1 217 8.8E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 206 9.4E-94 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.8E-90 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 SUPERFAMILY SSF51366 5 211 1.78E-71 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 PIRSF PIRSF001461 1 226 1.3E-98 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Thivi_3477 f3f322a39e9a1ab2f801a96bebe362a6 227 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Thivi_1490 bcfa55a411ccd3b35fb53bcf6e870205 170 Hamap MF_00984 Single-stranded DNA-binding protein. 5 116 30.786 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Thivi_1490 bcfa55a411ccd3b35fb53bcf6e870205 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 170 1.8E-42 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Thivi_1490 bcfa55a411ccd3b35fb53bcf6e870205 170 Pfam PF00436 Single-strand binding protein family 5 105 1.5E-33 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Thivi_1490 bcfa55a411ccd3b35fb53bcf6e870205 170 Gene3D G3DSA:2.40.50.140 1 114 1.9E-40 T 13-10-2018 Thivi_1490 bcfa55a411ccd3b35fb53bcf6e870205 170 SUPERFAMILY SSF50249 3 170 2.26E-45 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_2194 2111a841acb181f9eb1380c733d12d53 247 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 16 217 7.9E-10 T 13-10-2018 IPR018763 Protein of unknown function DUF2334 Thivi_2194 2111a841acb181f9eb1380c733d12d53 247 SUPERFAMILY SSF88713 29 214 4.77E-11 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_2194 2111a841acb181f9eb1380c733d12d53 247 Gene3D G3DSA:3.20.20.370 5 240 1.1E-11 T 13-10-2018 Thivi_4499 2effc4677c4ce4799d8cb36ce005d530 1038 SUPERFAMILY SSF49785 163 270 1.78E-11 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_4499 2effc4677c4ce4799d8cb36ce005d530 1038 Gene3D G3DSA:2.60.120.260 162 280 1.9E-9 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_4499 2effc4677c4ce4799d8cb36ce005d530 1038 Gene3D G3DSA:1.50.10.10 605 927 3.0E-21 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Thivi_4499 2effc4677c4ce4799d8cb36ce005d530 1038 SUPERFAMILY SSF48208 593 981 5.95E-30 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Thivi_4499 2effc4677c4ce4799d8cb36ce005d530 1038 SUPERFAMILY SSF49785 5 155 7.99E-5 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_1960 87bca1b233671fe4d510cdadfc6d27f5 77 Pfam PF04023 FeoA domain 3 76 1.1E-17 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_1960 87bca1b233671fe4d510cdadfc6d27f5 77 SMART SM00899 3 76 1.9E-24 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_1960 87bca1b233671fe4d510cdadfc6d27f5 77 Gene3D G3DSA:2.30.30.90 7 77 1.2E-26 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Thivi_1960 87bca1b233671fe4d510cdadfc6d27f5 77 SUPERFAMILY SSF50037 7 76 5.26E-21 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Thivi_1495 31d0e89e7794a45728d2a62d06b6adfe 91 SUPERFAMILY SSF55729 1 61 5.79E-5 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 PIRSF PIRSF000005 1 195 1.5E-31 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 35 95 7.2E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 Gene3D G3DSA:1.10.760.10 106 195 2.1E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 Gene3D G3DSA:1.10.760.10 27 102 2.0E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 SUPERFAMILY SSF46626 13 101 2.61E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1816 095c302df071d9e6f96f60a322bb73bc 195 SUPERFAMILY SSF46626 107 194 1.25E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1168 232128b741fc424c6103c7bc725d2ea5 252 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 18 213 1.7E-42 T 13-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Thivi_1168 232128b741fc424c6103c7bc725d2ea5 252 Pfam PF02361 Cobalt transport protein 13 217 6.2E-27 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Thivi_2245 9b260b0b1cb9fa65815a735e25e1f2dc 323 Gene3D G3DSA:3.30.1330.40 197 322 1.8E-11 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_2245 9b260b0b1cb9fa65815a735e25e1f2dc 323 SUPERFAMILY SSF55298 195 318 9.42E-8 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Thivi_2580 ca1fac6f3f6bb73ff85282f676ea001a 80 SUPERFAMILY SSF89447 4 46 4.58E-7 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2580 ca1fac6f3f6bb73ff85282f676ea001a 80 Gene3D G3DSA:2.10.260.10 1 42 1.2E-6 T 13-10-2018 Thivi_2580 ca1fac6f3f6bb73ff85282f676ea001a 80 SMART SM00966 8 50 0.0044 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_0934 68f4d2a16297da0d7474fbe2d2296732 99 SUPERFAMILY SSF54285 5 80 1.26E-24 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_0934 68f4d2a16297da0d7474fbe2d2296732 99 Gene3D G3DSA:3.10.20.280 1 90 1.3E-32 T 13-10-2018 IPR037021 RnfH superfamily Thivi_0934 68f4d2a16297da0d7474fbe2d2296732 99 Pfam PF03658 RnfH family Ubiquitin 7 88 4.7E-34 T 13-10-2018 IPR005346 RnfH protein Thivi_0934 68f4d2a16297da0d7474fbe2d2296732 99 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 24.764 T 13-10-2018 IPR005346 RnfH protein Thivi_0168 63814d29090c930b1aff541934a1f425 257 Gene3D G3DSA:3.30.65.10 204 257 5.7E-6 T 13-10-2018 Thivi_0168 63814d29090c930b1aff541934a1f425 257 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 217 256 6.6E-10 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Thivi_0168 63814d29090c930b1aff541934a1f425 257 Pfam PF08378 Nuclease-related domain 33 144 2.0E-27 T 13-10-2018 IPR011528 Nuclease-related domain, NERD Thivi_0168 63814d29090c930b1aff541934a1f425 257 SUPERFAMILY SSF57783 211 255 1.67E-7 T 13-10-2018 Thivi_3009 8141710173fd6e1aa6d3cf78a7a7b1ba 92 Gene3D G3DSA:1.10.260.40 1 92 2.3E-20 T 13-10-2018 Thivi_3009 8141710173fd6e1aa6d3cf78a7a7b1ba 92 SMART SM00530 36 90 3.4E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_3009 8141710173fd6e1aa6d3cf78a7a7b1ba 92 Pfam PF13560 Helix-turn-helix domain 38 80 4.1E-10 T 13-10-2018 Thivi_3009 8141710173fd6e1aa6d3cf78a7a7b1ba 92 SUPERFAMILY SSF47413 38 86 1.71E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 Pfam PF00582 Universal stress protein family 3 141 7.9E-30 T 13-10-2018 IPR006016 UspA Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 SUPERFAMILY SSF52402 3 141 6.87E-34 T 13-10-2018 Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 PRINTS PR01438 Universal stress protein signature 119 141 1.0E-16 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 PRINTS PR01438 Universal stress protein signature 101 113 1.0E-16 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 PRINTS PR01438 Universal stress protein signature 1 18 1.0E-16 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0085 7abf2215e0d4baa96d1ee3508987592f 141 Gene3D G3DSA:3.40.50.620 1 141 1.3E-35 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 Gene3D G3DSA:1.25.40.10 103 260 1.5E-43 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 SUPERFAMILY SSF81901 111 233 1.26E-28 T 13-10-2018 Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 Pfam PF08238 Sel1 repeat 195 229 0.038 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 Pfam PF08238 Sel1 repeat 119 157 8.2E-4 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 Pfam PF08238 Sel1 repeat 158 193 2.2E-10 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 SMART SM00671 119 157 0.1 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 SMART SM00671 158 193 2.6E-11 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0523 2248f2c9d8c128d3cb36785de341a2dd 276 SMART SM00671 194 229 0.0023 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 Gene3D G3DSA:3.40.50.2300 1 136 1.7E-37 T 13-10-2018 Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 SMART SM00448 5 117 2.9E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 SMART SM00471 159 298 3.1E-9 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 Gene3D G3DSA:1.10.3210.10 139 341 7.0E-73 T 13-10-2018 Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 Pfam PF01966 HD domain 166 288 1.5E-19 T 13-10-2018 IPR006674 HD domain Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 SUPERFAMILY SSF109604 151 329 1.44E-39 T 13-10-2018 Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 Pfam PF00072 Response regulator receiver domain 7 116 1.9E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_2378 24ffda1d59ac4056ec779787cf894c17 345 SUPERFAMILY SSF52172 2 133 4.27E-38 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0578 89a8ffb1b0dc0fae372aef5f32009cfb 314 Pfam PF11348 Protein of unknown function (DUF3150) 9 258 1.0E-93 T 13-10-2018 IPR021496 Protein of unknown function DUF3150 Thivi_1337 ca11d4ccd1be3bd104970f7a7af81fdc 349 PIRSF PIRSF002825 10 349 8.3E-87 T 13-10-2018 IPR026045 Ferric binding protein Thivi_1337 ca11d4ccd1be3bd104970f7a7af81fdc 349 Gene3D G3DSA:3.40.190.10 135 347 5.7E-125 T 13-10-2018 Thivi_1337 ca11d4ccd1be3bd104970f7a7af81fdc 349 Gene3D G3DSA:3.40.190.10 37 312 5.7E-125 T 13-10-2018 Thivi_1337 ca11d4ccd1be3bd104970f7a7af81fdc 349 Pfam PF13343 Bacterial extracellular solute-binding protein 82 308 5.1E-23 T 13-10-2018 Thivi_1337 ca11d4ccd1be3bd104970f7a7af81fdc 349 SUPERFAMILY SSF53850 35 345 2.17E-79 T 13-10-2018 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-44 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 Gene3D G3DSA:3.90.470.10 1 110 1.7E-43 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 SUPERFAMILY SSF54843 2 109 2.35E-40 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.9E-36 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Thivi_4206 941bddc87035c8b4ad47b030f976168c 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.451 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2492 7d9d202a040c4a4b99d3a9c039f31c6b 81 Gene3D G3DSA:2.10.260.10 1 80 3.7E-7 T 13-10-2018 Thivi_2492 7d9d202a040c4a4b99d3a9c039f31c6b 81 SUPERFAMILY SSF89447 1 65 6.8E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2492 7d9d202a040c4a4b99d3a9c039f31c6b 81 SMART SM00966 6 51 0.0053 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 79 182 1.7E-38 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 SUPERFAMILY SSF103088 75 182 1.16E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 PRINTS PR01021 OMPA domain signature 112 127 7.4E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 PRINTS PR01021 OMPA domain signature 127 143 7.4E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 PRINTS PR01021 OMPA domain signature 82 104 7.4E-15 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 Gene3D G3DSA:3.30.1330.60 65 182 7.3E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 7 182 28.364 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Thivi_1791 515801e242e27cc27e9751ac08c6e6cd 182 Pfam PF00691 OmpA family 81 171 2.8E-18 T 13-10-2018 IPR006665 OmpA-like domain Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 Pfam PF00294 pfkB family carbohydrate kinase 51 317 8.3E-52 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 PRINTS PR00990 Ribokinase signature 243 254 3.0E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 PRINTS PR00990 Ribokinase signature 55 74 3.0E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 PRINTS PR00990 Ribokinase signature 205 220 3.0E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 SUPERFAMILY SSF53613 1 317 2.34E-73 T 13-10-2018 IPR029056 Ribokinase-like Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 Gene3D G3DSA:3.30.1110.10 14 132 6.3E-76 T 13-10-2018 Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 Gene3D G3DSA:3.40.1190.20 7 313 6.3E-76 T 13-10-2018 IPR029056 Ribokinase-like Thivi_4308 b3f990b12b55ee0e7bae23f213593d1c 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 272 285 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Thivi_4286 a6ab6d8d06f8d35b524f5997057d3042 194 Pfam PF12007 Protein of unknown function (DUF3501) 3 191 4.3E-77 T 13-10-2018 IPR021890 Protein of unknown function DUF3501 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0028 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 SUPERFAMILY SSF51161 2 256 1.8E-73 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 69 2.1E-24 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 273 1.3E-142 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Gene3D G3DSA:2.160.10.10 87 257 1.1E-55 T 13-10-2018 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Gene3D G3DSA:1.10.166.10 2 70 7.1E-28 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 55.834 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 Thivi_2609 dec9006c960676b14db710f42f5d3baa 273 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.5E-13 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 SUPERFAMILY SSF50249 1 66 2.14E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 5.0E-30 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 Gene3D G3DSA:2.40.50.140 1 66 3.0E-29 T 13-10-2018 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 PIRSF PIRSF002599 1 68 6.9E-25 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 SMART SM00357 3 67 3.6E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 PRINTS PR00050 Cold shock protein signature 25 34 1.7E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_4573 8645f1eee2930856aea334da0bcdc74d 68 PRINTS PR00050 Cold shock protein signature 40 58 1.7E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Thivi_2004 4db4e75d9cf564ec57b7ceeace9a8e4a 85 Gene3D G3DSA:3.40.1620.10 1 51 1.8E-24 T 13-10-2018 Thivi_2004 4db4e75d9cf564ec57b7ceeace9a8e4a 85 SUPERFAMILY SSF143120 1 57 1.44E-12 T 13-10-2018 IPR036165 YefM-like superfamily Thivi_2004 4db4e75d9cf564ec57b7ceeace9a8e4a 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 67 1.8E-17 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thivi_2004 4db4e75d9cf564ec57b7ceeace9a8e4a 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 49 5.8E-13 T 13-10-2018 Thivi_0997 b234648a6dc34c1a458de2dc14274549 82 SUPERFAMILY SSF143880 1 79 1.7E-21 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_0997 b234648a6dc34c1a458de2dc14274549 82 Gene3D G3DSA:3.30.2020.10 1 80 1.0E-9 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_0997 b234648a6dc34c1a458de2dc14274549 82 Pfam PF10387 Protein of unknown function (DUF2442) 6 78 4.2E-17 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_2781 cf6bef8ccba6e74926ee7f6187cc1336 382 SUPERFAMILY SSF56112 28 362 1.11E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_2781 cf6bef8ccba6e74926ee7f6187cc1336 382 Pfam PF01636 Phosphotransferase enzyme family 42 282 1.9E-29 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Thivi_2781 cf6bef8ccba6e74926ee7f6187cc1336 382 Gene3D G3DSA:3.90.1200.10 133 357 9.1E-13 T 13-10-2018 Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 SUPERFAMILY SSF52317 225 454 4.88E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 Gene3D G3DSA:3.40.50.300 21 273 4.7E-47 T 13-10-2018 Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 SUPERFAMILY SSF52540 24 269 1.18E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 Gene3D G3DSA:3.40.50.880 287 428 5.3E-14 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 26 270 1.8E-17 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 26 516 7.1E-123 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 286 475 2.2E-52 T 13-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Thivi_1708 14fe9ef0b61e8e47f4f07b492de8e21e 522 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 522 184.429 T 13-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 PRINTS PR00421 Thioredoxin family signature 21 29 3.7E-9 T 13-10-2018 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 PRINTS PR00421 Thioredoxin family signature 29 38 3.7E-9 T 13-10-2018 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 PRINTS PR00421 Thioredoxin family signature 68 79 3.7E-9 T 13-10-2018 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 SUPERFAMILY SSF52833 2 103 1.33E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 PIRSF PIRSF000077 1 104 2.5E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 5.7E-32 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 Gene3D G3DSA:3.40.30.10 1 114 7.6E-33 T 13-10-2018 Thivi_0621 2d9e22df26cadc0532336b2d6b06ebd5 123 Pfam PF00085 Thioredoxin 3 101 5.2E-29 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:3.50.50.60 434 750 1.2E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 432 742 1.6E-31 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:1.20.1260.10 854 996 7.1E-18 T 13-10-2018 IPR012347 Ferritin-like Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 307 754 8.4E-161 T 13-10-2018 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 SUPERFAMILY SSF51971 432 683 5.47E-62 T 13-10-2018 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 310 417 7.4E-41 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:2.40.30.10 1 92 1.1E-16 T 13-10-2018 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 PRINTS PR00419 Adrenodoxin reductase family signature 455 468 2.0E-16 T 13-10-2018 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 PRINTS PR00419 Adrenodoxin reductase family signature 432 454 2.0E-16 T 13-10-2018 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 PRINTS PR00419 Adrenodoxin reductase family signature 574 588 2.0E-16 T 13-10-2018 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 SUPERFAMILY SSF47240 863 1000 1.26E-20 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 SUPERFAMILY SSF52343 89 248 2.49E-32 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:3.50.50.60 531 683 1.2E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:3.40.50.80 100 203 9.1E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Gene3D G3DSA:1.10.1060.10 279 429 1.4E-40 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 SUPERFAMILY SSF46548 299 441 5.75E-32 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 212 249 4.0E-12 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 SUPERFAMILY SSF63380 1 92 3.14E-16 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_0900 c7e20758c8ae761ccbebd4b6e45156e9 1005 Pfam PF02915 Rubrerythrin 865 990 9.2E-6 T 13-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Thivi_2045 cc2c09fdd62880a087e16cbce1b406b6 114 Pfam PF12802 MarR family 41 95 1.2E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Thivi_2045 cc2c09fdd62880a087e16cbce1b406b6 114 SUPERFAMILY SSF46785 40 98 5.46E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2045 cc2c09fdd62880a087e16cbce1b406b6 114 Gene3D G3DSA:1.10.10.10 7 98 4.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3149 369794e442a43947b8819c670f6ded2d 265 SUPERFAMILY SSF56655 1 259 7.85E-87 T 13-10-2018 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 Pfam PF00459 Inositol monophosphatase family 3 248 2.6E-67 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 102 121 1.1E-31 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.1E-31 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 154 180 1.1E-31 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR01959 SuhB family inositol monophosphatase signature 196 208 1.1E-31 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 4.9E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 Gene3D G3DSA:3.30.540.10 1 138 1.2E-51 T 13-10-2018 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 Gene3D G3DSA:3.40.190.80 140 264 1.4E-35 T 13-10-2018 Thivi_3149 369794e442a43947b8819c670f6ded2d 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Thivi_3149 369794e442a43947b8819c670f6ded2d 265 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Thivi_3332 0147089d6f4feab2e34238723b49b457 96 Gene3D G3DSA:3.30.1200.10 1 95 7.3E-22 T 13-10-2018 IPR036591 YggU-like superfamily Thivi_3332 0147089d6f4feab2e34238723b49b457 96 SUPERFAMILY SSF69786 2 88 3.27E-22 T 13-10-2018 IPR036591 YggU-like superfamily Thivi_3332 0147089d6f4feab2e34238723b49b457 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 84 4.4E-20 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Thivi_3332 0147089d6f4feab2e34238723b49b457 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 17.48 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Thivi_3332 0147089d6f4feab2e34238723b49b457 96 SMART SM01152 7 85 4.7E-25 T 13-10-2018 IPR003746 Protein of unknown function DUF167 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 Pfam PF00085 Thioredoxin 5 106 3.3E-33 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 PRINTS PR00421 Thioredoxin family signature 24 32 1.5E-9 T 13-10-2018 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 PRINTS PR00421 Thioredoxin family signature 32 41 1.5E-9 T 13-10-2018 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 PRINTS PR00421 Thioredoxin family signature 72 83 1.5E-9 T 13-10-2018 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.6E-37 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 Gene3D G3DSA:3.40.30.10 4 108 3.4E-35 T 13-10-2018 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 PIRSF PIRSF000077 2 108 2.2E-43 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Thivi_2505 6407e7946dc041a62052f30845f7fb59 108 SUPERFAMILY SSF52833 2 108 3.9E-40 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.5E-69 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 SUPERFAMILY SSF47973 6 149 1.57E-61 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 PIRSF PIRSF002122 2 156 2.1E-60 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 Gene3D G3DSA:1.10.455.10 2 156 3.9E-62 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.3E-67 T 13-10-2018 IPR023798 Ribosomal protein S7 domain Thivi_4197 b311ad236ae9143c583fb6cb28fee219 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.498 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Thivi_2192 a1fc3ed60dff0bfbd704f065aed0a245 431 Gene3D G3DSA:3.40.50.300 51 382 3.1E-56 T 13-10-2018 Thivi_2192 a1fc3ed60dff0bfbd704f065aed0a245 431 Pfam PF13469 Sulfotransferase family 73 334 2.5E-22 T 13-10-2018 Thivi_2192 a1fc3ed60dff0bfbd704f065aed0a245 431 SUPERFAMILY SSF52540 36 340 2.66E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3769 8ba85145890ce78a708660fce92d6f97 316 Gene3D G3DSA:3.40.1500.20 11 235 5.4E-19 T 13-10-2018 Thivi_3769 8ba85145890ce78a708660fce92d6f97 316 Pfam PF05996 Ferredoxin-dependent bilin reductase 34 230 4.2E-8 T 13-10-2018 IPR009249 Ferredoxin-dependent bilin reductase GO:0010024|GO:0016636|GO:0050897|GO:0055114 Thivi_3769 8ba85145890ce78a708660fce92d6f97 316 Gene3D G3DSA:1.10.8.550 261 311 3.3E-11 T 13-10-2018 Thivi_3769 8ba85145890ce78a708660fce92d6f97 316 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 263 303 2.1E-10 T 13-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_4153 e146f785ebf78ef0874fcfa5e8ad822e 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 138 5.6E-39 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_4153 e146f785ebf78ef0874fcfa5e8ad822e 138 SUPERFAMILY SSF111038 1 138 4.32E-47 T 13-10-2018 IPR035917 YjbQ-like superfamily Thivi_4153 e146f785ebf78ef0874fcfa5e8ad822e 138 PIRSF PIRSF004681 1 138 1.5E-46 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_4153 e146f785ebf78ef0874fcfa5e8ad822e 138 Pfam PF01894 Uncharacterised protein family UPF0047 18 134 5.8E-38 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_4153 e146f785ebf78ef0874fcfa5e8ad822e 138 Gene3D G3DSA:2.60.120.460 1 138 9.6E-41 T 13-10-2018 IPR035917 YjbQ-like superfamily Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 SUPERFAMILY SSF56918 3 47 1.47E-18 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 PIRSF PIRSF002900 1 47 5.1E-24 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 PRINTS PR00674 Light harvesting protein B chain signature 9 29 8.2E-13 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 PRINTS PR00674 Light harvesting protein B chain signature 29 46 8.2E-13 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 Pfam PF00556 Antenna complex alpha/beta subunit 12 47 3.6E-12 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_2002 a1f5e720c38471806fe131de17ce9406 47 Gene3D G3DSA:1.20.5.250 1 47 1.8E-25 T 13-10-2018 Thivi_1712 369bb502eb61b55a3325982d8b3c97a9 363 SUPERFAMILY SSF159245 31 356 1.96E-106 T 13-10-2018 Thivi_1712 369bb502eb61b55a3325982d8b3c97a9 363 Gene3D G3DSA:2.40.370.10 228 360 4.6E-47 T 13-10-2018 IPR023374 AttH-like domain superfamily Thivi_1712 369bb502eb61b55a3325982d8b3c97a9 363 Pfam PF17186 Lipocalin-like domain 228 356 3.0E-41 T 13-10-2018 Thivi_1712 369bb502eb61b55a3325982d8b3c97a9 363 Pfam PF07143 CrtC N-terminal lipocalin domain 54 224 2.8E-54 T 13-10-2018 IPR010791 AttH domain Thivi_1712 369bb502eb61b55a3325982d8b3c97a9 363 Gene3D G3DSA:2.40.370.10 42 227 2.4E-69 T 13-10-2018 IPR023374 AttH-like domain superfamily Thivi_2448 b7537fb3256012bdecb0d83e5d9f53d7 164 Pfam PF00294 pfkB family carbohydrate kinase 16 114 2.4E-8 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB Thivi_2448 b7537fb3256012bdecb0d83e5d9f53d7 164 SUPERFAMILY SSF53613 15 120 5.79E-16 T 13-10-2018 IPR029056 Ribokinase-like Thivi_2448 b7537fb3256012bdecb0d83e5d9f53d7 164 Gene3D G3DSA:3.40.1190.20 13 159 9.3E-22 T 13-10-2018 IPR029056 Ribokinase-like Thivi_2764 69048ef4e48263ffe0ed95090e5e22c6 317 Pfam PF05448 Acetyl xylan esterase (AXE1) 27 294 3.4E-20 T 13-10-2018 IPR008391 Acetyl xylan esterase Thivi_2764 69048ef4e48263ffe0ed95090e5e22c6 317 SUPERFAMILY SSF53474 21 314 1.39E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2764 69048ef4e48263ffe0ed95090e5e22c6 317 Gene3D G3DSA:3.40.50.1820 9 309 3.1E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2686 435d797c8cbeb89cd177ff86162ecc0a 347 Gene3D G3DSA:3.40.50.720 5 340 1.2E-64 T 13-10-2018 Thivi_2686 435d797c8cbeb89cd177ff86162ecc0a 347 SUPERFAMILY SSF51735 11 338 3.64E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2686 435d797c8cbeb89cd177ff86162ecc0a 347 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 240 8.1E-30 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 59 450 1.0E-43 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 Gene3D G3DSA:3.40.50.1980 51 190 1.1E-6 T 13-10-2018 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 Gene3D G3DSA:3.40.50.1980 322 459 5.0E-16 T 13-10-2018 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 SUPERFAMILY SSF53807 52 453 4.91E-57 T 13-10-2018 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 TIGRFAM TIGR02015 BchY: chlorophyllide reductase subunit Y 46 467 3.4E-210 T 13-10-2018 IPR010245 Chlorophyllide reductase subunit Y GO:0015979|GO:0016021|GO:0016731|GO:0030494 KEGG: 00860+1.3.7.15|MetaCyc: PWY-5526 Thivi_2010 4966a0a3122bc7d51ad23677d16d1095 491 PIRSF PIRSF000163 49 489 6.1E-134 T 13-10-2018 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_0141 521284129b4e508225d45dd800951a1e 400 Pfam PF09375 Imelysin 52 353 5.1E-38 T 13-10-2018 IPR018976 Imelysin-like domain Thivi_0141 521284129b4e508225d45dd800951a1e 400 Gene3D G3DSA:1.20.1420.20 35 376 6.1E-60 T 13-10-2018 IPR038352 Imelysin-like domain superfamily Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 Gene3D G3DSA:3.40.50.720 3 273 6.4E-144 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.2E-5 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.2E-5 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.2E-5 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 1.2E-5 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 SUPERFAMILY SSF51735 1 334 1.84E-97 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 Gene3D G3DSA:3.90.25.10 193 328 6.4E-144 T 13-10-2018 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.1E-137 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Thivi_4343 1450af625b12294dd4c4e8ea1d8f066e 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.8E-57 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 Pfam PF00155 Aminotransferase class I and II 45 383 3.0E-60 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 7 387 50.586 T 13-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 Gene3D G3DSA:3.90.1150.10 45 380 2.0E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 238 247 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 383 6.8E-147 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 SUPERFAMILY SSF53383 8 386 1.21E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1763 8bb6d2bda7b0cb973af3b0f9de629591 390 Gene3D G3DSA:3.40.640.10 61 289 2.0E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_1047 247c5c4a76650b5147158f5330d4ec4a 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 440 7.4E-113 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1047 247c5c4a76650b5147158f5330d4ec4a 477 SUPERFAMILY SSF81442 9 462 7.19E-117 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1047 247c5c4a76650b5147158f5330d4ec4a 477 Gene3D G3DSA:1.20.210.10 1 471 8.9E-193 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1047 247c5c4a76650b5147158f5330d4ec4a 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 258 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1047 247c5c4a76650b5147158f5330d4ec4a 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 461 1.7E-201 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Thivi_1268 0d7299d1ea8e3434f5b6726e466f9dc8 486 Gene3D G3DSA:3.40.50.11290 220 317 2.1E-39 T 13-10-2018 Thivi_1268 0d7299d1ea8e3434f5b6726e466f9dc8 486 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 457 2.5E-159 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Thivi_1268 0d7299d1ea8e3434f5b6726e466f9dc8 486 PIRSF PIRSF005522 1 484 2.6E-217 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Thivi_1268 0d7299d1ea8e3434f5b6726e466f9dc8 486 SUPERFAMILY SSF56059 38 472 3.65E-61 T 13-10-2018 Thivi_1268 0d7299d1ea8e3434f5b6726e466f9dc8 486 Gene3D G3DSA:3.30.1490.270 354 414 9.9E-24 T 13-10-2018 Thivi_1036 ace630333c6ed28c2df67f5c3f1c8719 183 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 161 19.607 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Thivi_1036 ace630333c6ed28c2df67f5c3f1c8719 183 Pfam PF01029 NusB family 12 158 6.1E-29 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Thivi_1036 ace630333c6ed28c2df67f5c3f1c8719 183 SUPERFAMILY SSF48013 8 159 5.1E-33 T 13-10-2018 IPR035926 NusB-like superfamily Thivi_1036 ace630333c6ed28c2df67f5c3f1c8719 183 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 159 1.8E-33 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 Thivi_1036 ace630333c6ed28c2df67f5c3f1c8719 183 Gene3D G3DSA:1.10.940.10 4 163 1.1E-34 T 13-10-2018 IPR035926 NusB-like superfamily Thivi_3093 9c98baab929621f1c04a32a6aaaa2dc3 108 Gene3D G3DSA:1.10.1660.10 14 107 5.0E-29 T 13-10-2018 Thivi_3093 9c98baab929621f1c04a32a6aaaa2dc3 108 Pfam PF13591 MerR HTH family regulatory protein 20 103 4.3E-21 T 13-10-2018 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 232 353 2.0E-32 T 13-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 SUPERFAMILY SSF53790 4 205 5.76E-41 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 SUPERFAMILY SSF53335 207 381 4.38E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 186 5.0E-21 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 Gene3D G3DSA:3.40.50.150 226 402 3.4E-66 T 13-10-2018 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 Gene3D G3DSA:3.40.1010.10 3 103 8.2E-18 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 PIRSF PIRSF036428 1 403 7.9E-143 T 13-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 Thivi_1684 2bf2c088f03f5e05b7b302263b24d256 403 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 192 1.4E-46 T 13-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 499 2.5E-191 T 13-10-2018 IPR004482 Mg chelatase-related protein Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 408 499 7.3E-29 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 Gene3D G3DSA:3.30.230.10 38 169 3.9E-7 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.7E-43 T 13-10-2018 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 SUPERFAMILY SSF52540 193 502 1.18E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 SMART SM00382 212 395 4.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 Gene3D G3DSA:3.40.50.300 193 501 1.2E-55 T 13-10-2018 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 SUPERFAMILY SSF54211 9 169 7.97E-33 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 396 4.1E-97 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 292 306 1.4E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 320 333 1.4E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 211 226 1.4E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Thivi_3466 8fd877b12c73e3b7b65f41068b41d179 508 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 344 356 1.4E-6 T 13-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Thivi_1794 8fb0604862f584ea3a5ececfb5fc184b 147 Gene3D G3DSA:3.30.420.270 61 132 1.9E-14 T 13-10-2018 Thivi_1794 8fb0604862f584ea3a5ececfb5fc184b 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 7 140 26.696 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Thivi_1794 8fb0604862f584ea3a5ececfb5fc184b 147 TIGRFAM TIGR02801 tolR: protein TolR 14 139 9.0E-40 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Thivi_1794 8fb0604862f584ea3a5ececfb5fc184b 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 140 2.6E-23 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Thivi_3025 660d8eed0a8420988815249946f587a7 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 5.4E-60 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Thivi_3025 660d8eed0a8420988815249946f587a7 131 SUPERFAMILY SSF54593 1 125 2.01E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_3025 660d8eed0a8420988815249946f587a7 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 4.4E-24 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Thivi_3025 660d8eed0a8420988815249946f587a7 131 Gene3D G3DSA:3.10.180.10 1 125 2.6E-46 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thivi_2276 487d25f14281086b04c994a9ec07aaf2 462 Pfam PF00268 Ribonucleotide reductase, small chain 142 429 3.6E-83 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_2276 487d25f14281086b04c994a9ec07aaf2 462 PIRSF PIRSF000355 116 462 3.8E-138 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Thivi_2276 487d25f14281086b04c994a9ec07aaf2 462 SUPERFAMILY SSF47240 115 435 1.89E-96 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_2276 487d25f14281086b04c994a9ec07aaf2 462 Gene3D G3DSA:1.10.620.20 125 455 8.4E-112 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Thivi_2690 a5a7628ee6f8f3ab59eb9fcdc2b0393e 200 SUPERFAMILY SSF53335 39 180 3.71E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2690 a5a7628ee6f8f3ab59eb9fcdc2b0393e 200 Gene3D G3DSA:3.40.50.150 25 177 3.1E-15 T 13-10-2018 Thivi_2690 a5a7628ee6f8f3ab59eb9fcdc2b0393e 200 Pfam PF08241 Methyltransferase domain 41 92 5.5E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 Gene3D G3DSA:3.40.50.150 192 364 1.4E-21 T 13-10-2018 Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 SUPERFAMILY SSF53335 171 354 1.89E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 212 349 1.5E-15 T 13-10-2018 IPR006342 Methyltransferase FkbM Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 Gene3D G3DSA:1.25.40.10 2 122 5.1E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 SUPERFAMILY SSF48452 4 135 5.69E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0889 655108c00c8e6c4f4bc80c13af4249c0 415 Pfam PF05050 Methyltransferase FkbM domain 214 342 1.3E-5 T 13-10-2018 IPR006342 Methyltransferase FkbM Thivi_1118 cb44d617a64694b8475742b84e340187 567 Pfam PF13768 von Willebrand factor type A domain 3 165 7.6E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1118 cb44d617a64694b8475742b84e340187 567 Gene3D G3DSA:3.40.50.410 3 187 6.6E-26 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1118 cb44d617a64694b8475742b84e340187 567 SMART SM00327 1 177 4.8E-5 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1118 cb44d617a64694b8475742b84e340187 567 SUPERFAMILY SSF53300 2 183 6.99E-21 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 SUPERFAMILY SSF81901 63 138 2.88E-16 T 13-10-2018 Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 Gene3D G3DSA:1.25.40.10 52 155 7.5E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 Pfam PF08238 Sel1 repeat 100 135 8.6E-7 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 Pfam PF08238 Sel1 repeat 87 99 0.78 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 SMART SM00671 68 99 25.0 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0800 bf96c1aaa02c869241ce21394ea8d74a 158 SMART SM00671 100 135 2.3E-7 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_1638 0cdddfe161698b1a5a09d0561cc94a1a 89 SUPERFAMILY SSF143120 1 73 2.88E-12 T 13-10-2018 IPR036165 YefM-like superfamily Thivi_1638 0cdddfe161698b1a5a09d0561cc94a1a 89 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 68 1.3E-8 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thivi_0897 00638eee648a42d7a9e0cb4538fbcbca 620 SUPERFAMILY SSF50249 190 558 9.14E-85 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0897 00638eee648a42d7a9e0cb4538fbcbca 620 SMART SM00955 244 516 3.0E-69 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Thivi_0897 00638eee648a42d7a9e0cb4538fbcbca 620 Pfam PF00773 RNB domain 244 514 1.0E-53 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Thivi_0897 00638eee648a42d7a9e0cb4538fbcbca 620 SUPERFAMILY SSF50249 560 618 2.06E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0897 00638eee648a42d7a9e0cb4538fbcbca 620 Gene3D G3DSA:1.10.10.10 167 235 2.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 13 44 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 PRINTS PR00674 Light harvesting protein B chain signature 8 28 6.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 PRINTS PR00674 Light harvesting protein B chain signature 28 45 6.6E-8 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 PIRSF PIRSF002900 1 46 1.2E-16 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 Pfam PF00556 Antenna complex alpha/beta subunit 12 46 5.1E-7 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 Gene3D G3DSA:1.20.5.250 2 46 7.7E-23 T 13-10-2018 Thivi_1981 2817670e9afe17e5524e73ba279618c3 46 SUPERFAMILY SSF56918 3 46 9.94E-13 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_2300 0ba6b79dbeb56c6ec6651d0442f5ceae 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 5.8E-151 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Thivi_2300 0ba6b79dbeb56c6ec6651d0442f5ceae 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 444 7.4E-150 T 13-10-2018 IPR010263 Type VI secretion protein, VC_A0114 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 Pfam PF07669 Eco57I restriction-modification methylase 564 656 2.1E-5 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 565 577 1.3E-10 T 13-10-2018 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 338 352 1.3E-10 T 13-10-2018 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 596 620 1.3E-10 T 13-10-2018 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 568 574 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_1476 ed5a3038ec6a3fdd53f247ce67125121 1513 SUPERFAMILY SSF53335 77 689 6.55E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 SUPERFAMILY SSF52172 7 139 2.42E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 Pfam PF00072 Response regulator receiver domain 9 120 3.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 SMART SM00471 169 320 5.3E-8 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 SUPERFAMILY SSF109604 158 351 3.45E-33 T 13-10-2018 Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 Pfam PF13487 HD domain 232 302 5.3E-19 T 13-10-2018 Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 Gene3D G3DSA:1.10.3210.10 149 363 2.2E-76 T 13-10-2018 Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 SMART SM00448 7 120 5.1E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1010 e3feac0f433f4041616a20e66c941ca7 376 Gene3D G3DSA:3.40.50.2300 4 139 1.6E-38 T 13-10-2018 Thivi_1918 60b3525176e80682694d0215910636c7 268 Pfam PF01578 Cytochrome C assembly protein 45 265 2.7E-34 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Thivi_1084 27f0f05696926708d4b96604a8c4b35e 134 Gene3D G3DSA:3.30.300.130 30 134 1.7E-37 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_1084 27f0f05696926708d4b96604a8c4b35e 134 Pfam PF01883 Iron-sulfur cluster assembly protein 39 111 2.5E-20 T 13-10-2018 IPR002744 MIP18 family-like Thivi_1084 27f0f05696926708d4b96604a8c4b35e 134 SUPERFAMILY SSF117916 36 132 2.98E-32 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Thivi_1084 27f0f05696926708d4b96604a8c4b35e 134 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 37 134 1.0E-44 T 13-10-2018 IPR014291 SUF system FeS cluster assembly associated Thivi_1218 c72029c1da11606b4495999382d43ce0 348 SMART SM00448 5 128 5.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1218 c72029c1da11606b4495999382d43ce0 348 Pfam PF00072 Response regulator receiver domain 7 109 3.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1218 c72029c1da11606b4495999382d43ce0 348 SUPERFAMILY SSF52172 3 110 4.41E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1218 c72029c1da11606b4495999382d43ce0 348 Gene3D G3DSA:3.40.50.180 150 346 1.2E-72 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_1218 c72029c1da11606b4495999382d43ce0 348 SUPERFAMILY SSF52738 159 342 2.75E-67 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal Thivi_1218 c72029c1da11606b4495999382d43ce0 348 Gene3D G3DSA:3.40.50.2300 3 134 2.5E-31 T 13-10-2018 Thivi_1218 c72029c1da11606b4495999382d43ce0 348 PIRSF PIRSF000876 2 346 1.8E-130 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_1218 c72029c1da11606b4495999382d43ce0 348 Pfam PF01339 CheB methylesterase 162 339 4.0E-58 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_1218 c72029c1da11606b4495999382d43ce0 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 39.647 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Thivi_0502 7b4c7e7494d04c98632a6565c0ca7bd1 105 Pfam PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain 52 101 8.4E-13 T 13-10-2018 IPR002223 Pancreatic trypsin inhibitor Kunitz domain GO:0004867 Thivi_0502 7b4c7e7494d04c98632a6565c0ca7bd1 105 Gene3D G3DSA:4.10.410.10 47 105 1.6E-15 T 13-10-2018 IPR036880 Pancreatic trypsin inhibitor Kunitz domain superfamily GO:0004867 Thivi_0502 7b4c7e7494d04c98632a6565c0ca7bd1 105 SMART SM00131 50 102 1.1E-7 T 13-10-2018 IPR002223 Pancreatic trypsin inhibitor Kunitz domain GO:0004867 Thivi_0502 7b4c7e7494d04c98632a6565c0ca7bd1 105 SUPERFAMILY SSF57362 49 103 2.13E-14 T 13-10-2018 IPR036880 Pancreatic trypsin inhibitor Kunitz domain superfamily GO:0004867 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 SUPERFAMILY SSF51735 9 181 6.26E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 322 8.6E-52 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PIRSF PIRSF000114 3 335 1.5E-101 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 7 325 36.273 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 SUPERFAMILY SSF48179 182 334 3.57E-56 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 Gene3D G3DSA:3.40.50.720 2 186 1.5E-57 T 13-10-2018 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 11 28 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 61 88 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 5.8E-45 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 9 161 8.4E-45 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 Gene3D G3DSA:1.10.1040.10 187 329 8.3E-51 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Thivi_2790 5379cf45f625f84bc4cddae499330bbd 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Thivi_2791 e7441fbd1e74a8605c6c6ffcd8f19450 154 SUPERFAMILY SSF75217 4 152 3.2E-42 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_2791 e7441fbd1e74a8605c6c6ffcd8f19450 154 Gene3D G3DSA:3.40.1280.10 1 154 3.5E-58 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_2791 e7441fbd1e74a8605c6c6ffcd8f19450 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 31.136 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Thivi_2791 e7441fbd1e74a8605c6c6ffcd8f19450 154 Pfam PF00588 SpoU rRNA Methylase family 4 142 1.0E-29 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Thivi_2791 e7441fbd1e74a8605c6c6ffcd8f19450 154 PIRSF PIRSF029256 1 154 8.4E-61 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 SUPERFAMILY SSF53756 2 397 2.9E-77 T 13-10-2018 Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 Pfam PF00534 Glycosyl transferases group 1 208 364 3.8E-29 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 2 399 4.2E-195 T 13-10-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 Gene3D G3DSA:3.40.50.2000 192 378 3.0E-71 T 13-10-2018 Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 Pfam PF13579 Glycosyl transferase 4-like domain 15 190 2.0E-24 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_4027 dad7fa1bf7f325f4432d341b2b807a91 401 Gene3D G3DSA:3.40.50.2000 7 395 3.0E-71 T 13-10-2018 Thivi_1087 08b2d36446915d9f4b3dd1991ee8cf06 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 14 472 7.9E-193 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Thivi_1087 08b2d36446915d9f4b3dd1991ee8cf06 481 SUPERFAMILY SSF101960 36 478 8.5E-139 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Thivi_1087 08b2d36446915d9f4b3dd1991ee8cf06 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 9.7E-70 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.812 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 Pfam PF01196 Ribosomal protein L17 20 116 4.7E-33 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 SUPERFAMILY SSF64263 1 119 4.32E-50 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 Gene3D G3DSA:3.90.1030.10 1 116 3.0E-46 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4227 04f0abe54d0d41c47018b5e9d2a72e35 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 6.1E-45 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3415 1275936d1f11dc5c4de14f2893cee0e9 434 SUPERFAMILY SSF103473 9 421 1.24E-86 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_3415 1275936d1f11dc5c4de14f2893cee0e9 434 Pfam PF07690 Major Facilitator Superfamily 28 390 2.3E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Thivi_3415 1275936d1f11dc5c4de14f2893cee0e9 434 Gene3D G3DSA:1.20.1250.20 3 427 5.1E-84 T 13-10-2018 Thivi_2871 83d046b3a940d3d1ac83cff89a10d25d 142 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2871 83d046b3a940d3d1ac83cff89a10d25d 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 3.2E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2871 83d046b3a940d3d1ac83cff89a10d25d 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.3E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2538 e989be271ee7bb25dfc7e7ba3f19b867 375 SUPERFAMILY SSF53756 8 367 5.58E-65 T 13-10-2018 Thivi_2538 e989be271ee7bb25dfc7e7ba3f19b867 375 Gene3D G3DSA:3.40.50.2000 176 340 2.2E-56 T 13-10-2018 Thivi_2538 e989be271ee7bb25dfc7e7ba3f19b867 375 Gene3D G3DSA:3.40.50.2000 18 175 2.2E-56 T 13-10-2018 Thivi_2538 e989be271ee7bb25dfc7e7ba3f19b867 375 Pfam PF00534 Glycosyl transferases group 1 196 340 3.6E-30 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_2538 e989be271ee7bb25dfc7e7ba3f19b867 375 Pfam PF13439 Glycosyltransferase Family 4 18 178 2.6E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_2390 83be09a664d0144774e4f372af773f3d 301 Gene3D G3DSA:1.10.150.130 8 101 3.4E-22 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_2390 83be09a664d0144774e4f372af773f3d 301 Pfam PF00589 Phage integrase family 116 283 1.3E-42 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_2390 83be09a664d0144774e4f372af773f3d 301 SUPERFAMILY SSF56349 18 291 5.3E-55 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_2390 83be09a664d0144774e4f372af773f3d 301 Gene3D G3DSA:1.10.443.10 115 291 3.9E-55 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_2390 83be09a664d0144774e4f372af773f3d 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 93 1.0E-20 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Thivi_2390 83be09a664d0144774e4f372af773f3d 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 297 56.496 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Thivi_2390 83be09a664d0144774e4f372af773f3d 301 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 299 2.7E-109 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 Gene3D G3DSA:1.10.287.950 397 685 2.0E-69 T 13-10-2018 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 SMART SM00283 451 684 2.5E-70 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 Gene3D G3DSA:1.20.120.1530 206 355 4.2E-44 T 13-10-2018 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 SUPERFAMILY SSF58104 419 685 6.98E-62 T 13-10-2018 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 669 3.9E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 SMART SM00304 398 450 0.84 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 SMART SM00304 214 269 2.2 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_4115 c10d490ec75d57bbf6d450ef7451fab7 729 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 4.1E-21 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Thivi_0734 4030b748bafdc3da277288b691b28205 326 Pfam PF00753 Metallo-beta-lactamase superfamily 30 232 7.4E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_0734 4030b748bafdc3da277288b691b28205 326 SUPERFAMILY SSF56281 10 256 1.44E-54 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_0734 4030b748bafdc3da277288b691b28205 326 SMART SM00849 29 234 2.6E-27 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_0734 4030b748bafdc3da277288b691b28205 326 Gene3D G3DSA:3.60.15.10 13 271 3.4E-63 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_4544 43858994f161ec4fbdb2f0a3e05e0d97 209 Pfam PF04356 Protein of unknown function (DUF489) 7 196 2.8E-66 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Thivi_4544 43858994f161ec4fbdb2f0a3e05e0d97 209 Gene3D G3DSA:1.10.3890.10 3 207 3.5E-66 T 13-10-2018 IPR035932 HflD-like superfamily Thivi_4544 43858994f161ec4fbdb2f0a3e05e0d97 209 SUPERFAMILY SSF101322 4 204 6.15E-58 T 13-10-2018 IPR035932 HflD-like superfamily Thivi_4544 43858994f161ec4fbdb2f0a3e05e0d97 209 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 10 190 8.0E-29 T 13-10-2018 Thivi_4544 43858994f161ec4fbdb2f0a3e05e0d97 209 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 30.704 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD Thivi_3318 0511584338936fc0ed3e8f4776a388cd 265 Pfam PF05685 Putative restriction endonuclease 43 156 2.3E-18 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_3318 0511584338936fc0ed3e8f4776a388cd 265 SUPERFAMILY SSF52980 6 167 1.45E-32 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3318 0511584338936fc0ed3e8f4776a388cd 265 Gene3D G3DSA:3.90.1570.10 39 161 3.5E-12 T 13-10-2018 Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 104 134 1.2E-11 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 26 134 1.4E-53 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 108 132 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 PRINTS PR00618 DksA/TraR zinc finger signature 108 119 4.3E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 PRINTS PR00618 DksA/TraR zinc finger signature 120 132 4.3E-5 T 13-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 SUPERFAMILY SSF57716 105 142 8.7E-10 T 13-10-2018 Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 22 144 31.126 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 SUPERFAMILY SSF109635 11 103 2.48E-35 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily Thivi_4003 b3ec1b2af5fcf377726c0e9fb1f4e2aa 144 Gene3D G3DSA:1.20.120.910 15 143 2.7E-39 T 13-10-2018 Thivi_0151 8dbe5e9e30516c12bbcc0e1800a11e8b 233 Gene3D G3DSA:3.30.870.10 3 139 1.3E-8 T 13-10-2018 Thivi_0151 8dbe5e9e30516c12bbcc0e1800a11e8b 233 Pfam PF13091 PLD-like domain 17 132 5.5E-8 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Thivi_0151 8dbe5e9e30516c12bbcc0e1800a11e8b 233 SUPERFAMILY SSF56024 10 132 1.1E-9 T 13-10-2018 Thivi_1510 97ebbd16b5e7296311fc10a803594a5f 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 5 92 2.1E-15 T 13-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 Thivi_1510 97ebbd16b5e7296311fc10a803594a5f 93 Pfam PF07178 TraL protein 5 91 4.8E-27 T 13-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 Thivi_4366 3a487542f2581c65070a3a939508ce7b 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Thivi_4366 3a487542f2581c65070a3a939508ce7b 193 PIRSF PIRSF000847 1 188 1.0E-45 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Thivi_4366 3a487542f2581c65070a3a939508ce7b 193 Gene3D G3DSA:1.20.120.1760 3 182 1.7E-12 T 13-10-2018 Thivi_4366 3a487542f2581c65070a3a939508ce7b 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 70 4.0E-17 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Thivi_4366 3a487542f2581c65070a3a939508ce7b 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 2.1E-53 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 Gene3D G3DSA:1.10.8.630 39 150 9.5E-29 T 13-10-2018 Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 Gene3D G3DSA:3.40.50.300 234 421 1.3E-70 T 13-10-2018 Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 Pfam PF00271 Helicase conserved C-terminal domain 558 630 2.5E-6 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 SUPERFAMILY SSF52540 256 642 1.91E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 Hamap MF_00983 Probable primosomal protein N' [priA]. 43 776 24.234 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 Pfam PF04851 Type III restriction enzyme, res subunit 241 378 2.4E-10 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 SMART SM00490 534 631 3.3E-12 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 SMART SM00487 237 434 4.6E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3795 5dc026ae0c5d4b381553a98b0e32a903 777 TIGRFAM TIGR00595 priA: primosomal protein N' 263 773 3.3E-173 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Thivi_2784 35b9b27d861b40e2adac9a95651971d2 184 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 177 4.4E-54 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 Thivi_2784 35b9b27d861b40e2adac9a95651971d2 184 SUPERFAMILY SSF52317 1 181 2.72E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2784 35b9b27d861b40e2adac9a95651971d2 184 Pfam PF01965 DJ-1/PfpI family 3 165 1.4E-45 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Thivi_2784 35b9b27d861b40e2adac9a95651971d2 184 Gene3D G3DSA:3.40.50.880 1 184 8.1E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2900 87d8392a36a9922469381274a0a967ec 423 Pfam PF00483 Nucleotidyl transferase 18 281 5.2E-64 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_2900 87d8392a36a9922469381274a0a967ec 423 Gene3D G3DSA:2.160.10.10 293 422 9.2E-38 T 13-10-2018 Thivi_2900 87d8392a36a9922469381274a0a967ec 423 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 416 51.423 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_2900 87d8392a36a9922469381274a0a967ec 423 SUPERFAMILY SSF53448 14 369 1.38E-80 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2900 87d8392a36a9922469381274a0a967ec 423 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_2900 87d8392a36a9922469381274a0a967ec 423 Gene3D G3DSA:3.90.550.10 7 292 2.0E-87 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2900 87d8392a36a9922469381274a0a967ec 423 SUPERFAMILY SSF51161 302 414 1.32E-19 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_2900 87d8392a36a9922469381274a0a967ec 423 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 16 389 1.2E-155 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_2900 87d8392a36a9922469381274a0a967ec 423 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 109 117 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Thivi_4369 6fcbb03e4f847bde51e5164d82d7e32d 96 SUPERFAMILY SSF46689 6 87 6.45E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4369 6fcbb03e4f847bde51e5164d82d7e32d 96 Gene3D G3DSA:1.10.10.60 10 91 4.9E-12 T 13-10-2018 Thivi_4369 6fcbb03e4f847bde51e5164d82d7e32d 96 Pfam PF01527 Transposase 8 74 8.1E-13 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Thivi_1822 46f12a91d2c7483b4218f3b28c65e947 212 Gene3D G3DSA:1.10.357.10 1 187 5.5E-63 T 13-10-2018 Thivi_1822 46f12a91d2c7483b4218f3b28c65e947 212 SUPERFAMILY SSF48498 78 181 6.4E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Thivi_1822 46f12a91d2c7483b4218f3b28c65e947 212 SUPERFAMILY SSF46689 2 66 5.64E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1822 46f12a91d2c7483b4218f3b28c65e947 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 3.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 Gene3D G3DSA:2.40.30.10 1 96 6.2E-26 T 13-10-2018 Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 SUPERFAMILY SSF63380 3 98 5.38E-22 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 Gene3D G3DSA:3.40.50.80 97 247 2.6E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.6E-15 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 Pfam PF00970 Oxidoreductase FAD-binding domain 22 95 2.2E-6 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Thivi_0891 bb049ce5352b7bfdee69865f82094190 247 SUPERFAMILY SSF52343 104 243 2.1E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Thivi_3285 8cf2e53511f3e52d6dcd8a7ba186571e 108 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 3.5E-16 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Thivi_3285 8cf2e53511f3e52d6dcd8a7ba186571e 108 Gene3D G3DSA:2.60.300.12 2 108 1.1E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3285 8cf2e53511f3e52d6dcd8a7ba186571e 108 SUPERFAMILY SSF89360 1 97 2.55E-26 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3285 8cf2e53511f3e52d6dcd8a7ba186571e 108 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 108 6.2E-33 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Thivi_3285 8cf2e53511f3e52d6dcd8a7ba186571e 108 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 89 106 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Thivi_3665 4af16f4d456b4fa9657a8f6a810dc286 409 Gene3D G3DSA:2.40.30.170 69 315 4.9E-22 T 13-10-2018 Thivi_3665 4af16f4d456b4fa9657a8f6a810dc286 409 Pfam PF13533 Biotin-lipoyl like 74 121 2.3E-9 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_3665 4af16f4d456b4fa9657a8f6a810dc286 409 Gene3D G3DSA:1.10.287.470 107 229 4.9E-22 T 13-10-2018 Thivi_3665 4af16f4d456b4fa9657a8f6a810dc286 409 Gene3D G3DSA:2.40.50.100 73 266 4.9E-22 T 13-10-2018 Thivi_3665 4af16f4d456b4fa9657a8f6a810dc286 409 SUPERFAMILY SSF111369 68 251 6.54E-8 T 13-10-2018 Thivi_3706 199085c934d8cae4f3a997debdd841a7 188 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.6E-72 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Thivi_3706 199085c934d8cae4f3a997debdd841a7 188 SUPERFAMILY SSF51182 1 178 6.44E-78 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_3706 199085c934d8cae4f3a997debdd841a7 188 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 8.6E-76 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Thivi_3706 199085c934d8cae4f3a997debdd841a7 188 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 1.0E-63 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Thivi_3706 199085c934d8cae4f3a997debdd841a7 188 Gene3D G3DSA:2.60.120.10 1 188 7.1E-72 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_1212 b05410445f4660b44718006e08d365a9 137 Pfam PF03748 Flagellar basal body-associated protein FliL 36 137 4.4E-23 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Thivi_0074 93bfccb49437dd06e630d8024dd8a6eb 170 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 26 159 6.4E-28 T 13-10-2018 Thivi_0074 93bfccb49437dd06e630d8024dd8a6eb 170 PIRSF PIRSF004923 19 169 6.4E-25 T 13-10-2018 IPR026268 Protein RseC Thivi_4345 5b2116f96d9321457fbd63a86cb64fb9 107 Pfam PF03937 Flavinator of succinate dehydrogenase 14 83 5.9E-21 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase Thivi_4345 5b2116f96d9321457fbd63a86cb64fb9 107 SUPERFAMILY SSF109910 11 85 3.66E-20 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Thivi_4345 5b2116f96d9321457fbd63a86cb64fb9 107 Gene3D G3DSA:1.10.150.250 6 94 2.8E-25 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Gene3D G3DSA:1.10.287.470 98 199 1.4E-30 T 13-10-2018 Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Gene3D G3DSA:2.40.30.170 51 314 1.4E-30 T 13-10-2018 Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Pfam PF13437 HlyD family secretion protein 204 293 1.2E-7 T 13-10-2018 Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Gene3D G3DSA:2.40.50.100 64 238 1.4E-30 T 13-10-2018 Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Gene3D G3DSA:2.40.420.20 49 354 1.4E-30 T 13-10-2018 Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 Pfam PF13533 Biotin-lipoyl like 69 104 9.0E-9 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Thivi_0042 13fa033cacde7169e8a43210a0a924cb 393 SUPERFAMILY SSF111369 55 268 3.4E-14 T 13-10-2018 Thivi_1662 2470a14c73ee4703814b4e89c33fc609 76 Pfam PF07704 Rv0623-like transcription factor 1 75 9.5E-17 T 13-10-2018 IPR011660 Antitoxin VapB-like Thivi_0549 6541127057ec7196962ddc3d49250604 112 SUPERFAMILY SSF69721 4 112 1.31E-41 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_0549 6541127057ec7196962ddc3d49250604 112 Pfam PF04358 DsrC like protein 6 112 4.4E-46 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0549 6541127057ec7196962ddc3d49250604 112 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 112 4.4E-50 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0549 6541127057ec7196962ddc3d49250604 112 Gene3D G3DSA:1.10.10.370 42 112 1.9E-36 T 13-10-2018 Thivi_0549 6541127057ec7196962ddc3d49250604 112 Gene3D G3DSA:3.30.1420.10 1 41 2.6E-20 T 13-10-2018 Thivi_0549 6541127057ec7196962ddc3d49250604 112 PIRSF PIRSF006223 5 112 9.8E-43 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_3811 7c3eb2f7fb16c14d4f270fcdef240ef1 102 Pfam PF04341 Protein of unknown function, DUF485 11 99 7.8E-34 T 13-10-2018 IPR007436 Protein of unknown function DUF485 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 Gene3D G3DSA:1.10.287.1120 155 421 2.4E-73 T 13-10-2018 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 SUPERFAMILY SSF116734 6 205 5.56E-41 T 13-10-2018 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 SUPERFAMILY SSF116734 212 427 6.05E-36 T 13-10-2018 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 Pfam PF01420 Type I restriction modification DNA specificity domain 48 184 1.1E-11 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 Gene3D G3DSA:3.90.220.20 7 425 2.4E-73 T 13-10-2018 Thivi_1546 e13e4652f1211c6ce8b29d64da86b4d9 437 Gene3D G3DSA:3.90.220.20 230 378 2.4E-73 T 13-10-2018 Thivi_1389 d6f403ff356aa0549d74e79a945a96c7 244 SUPERFAMILY SSF56925 116 244 1.94E-6 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 Pfam PF00406 Adenylate kinase 5 185 2.0E-55 T 13-10-2018 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 TIGRFAM TIGR01351 adk: adenylate kinase 2 184 3.8E-70 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 PRINTS PR00094 Adenylate kinase signature 173 187 1.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 PRINTS PR00094 Adenylate kinase signature 4 17 1.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 PRINTS PR00094 Adenylate kinase signature 81 97 1.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 PRINTS PR00094 Adenylate kinase signature 32 46 1.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 PRINTS PR00094 Adenylate kinase signature 156 171 1.0E-34 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 SUPERFAMILY SSF52540 1 185 1.2E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 Hamap MF_00235 Adenylate kinase [adk]. 1 217 50.111 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.6E-16 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Thivi_0620 5c120489cd18f6b039179c4caf1a710a 219 Gene3D G3DSA:3.40.50.300 1 219 6.8E-75 T 13-10-2018 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 Gene3D G3DSA:3.30.540.10 1 197 4.8E-75 T 13-10-2018 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 6 337 47.049 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 311 336 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 68 94 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 31 58 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 4.3E-73 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 SUPERFAMILY SSF56655 4 335 1.43E-118 T 13-10-2018 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PIRSF PIRSF500210 2 338 9.4E-129 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 Gene3D G3DSA:3.40.190.80 198 338 2.7E-51 T 13-10-2018 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 7 196 1.1E-65 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 277 289 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_4144 150fd9d6c4b8934d9d31a1e9d6121326 338 PIRSF PIRSF000904 2 338 6.2E-126 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Thivi_0070 c470947af6f68e61a1fc881efaa3aba4 367 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 5 355 26.613 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_0070 c470947af6f68e61a1fc881efaa3aba4 367 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 11 354 4.1E-112 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_0070 c470947af6f68e61a1fc881efaa3aba4 367 Pfam PF03116 NQR2, RnfD, RnfE family 7 353 6.5E-110 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Thivi_2176 3668ab9b830448b155cdcf4347f78a2c 136 Gene3D G3DSA:1.20.1220.20 1 136 2.5E-31 T 13-10-2018 Thivi_2176 3668ab9b830448b155cdcf4347f78a2c 136 Pfam PF01724 Domain of unknown function DUF29 4 134 2.9E-46 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 SUPERFAMILY SSF53756 23 831 0.0 T 13-10-2018 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 Pfam PF00343 Carbohydrate phosphorylase 115 827 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 Gene3D G3DSA:3.40.50.2000 45 827 0.0 T 13-10-2018 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 PIRSF PIRSF000460 15 833 6.1E-223 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 26 827 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 672 684 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3462 c10616a86ce7bc75c95caf73b307128f 834 Gene3D G3DSA:3.40.50.2000 486 812 0.0 T 13-10-2018 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 SMART SM00028 71 104 0.14 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 SMART SM00028 105 138 0.054 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 SMART SM00028 139 172 60.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 Pfam PF13432 Tetratricopeptide repeat 77 136 3.6E-9 T 13-10-2018 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 Gene3D G3DSA:1.25.40.10 61 186 3.9E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 Pfam PF13181 Tetratricopeptide repeat 142 171 0.19 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3694 8cda51ed240d8f4fe9e44ecc9cfddc9b 189 SUPERFAMILY SSF48452 68 172 4.03E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0223 2265367f616742027231f7775158b4bb 333 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 22 328 7.0E-118 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Thivi_0223 2265367f616742027231f7775158b4bb 333 PRINTS PR00982 Lysyl-tRNA synthetase signature 37 47 8.6E-6 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_0223 2265367f616742027231f7775158b4bb 333 PRINTS PR00982 Lysyl-tRNA synthetase signature 105 122 8.6E-6 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_0223 2265367f616742027231f7775158b4bb 333 PRINTS PR00982 Lysyl-tRNA synthetase signature 216 232 8.6E-6 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Thivi_0223 2265367f616742027231f7775158b4bb 333 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 147 4.2E-15 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0223 2265367f616742027231f7775158b4bb 333 Pfam PF00152 tRNA synthetases class II (D, K and N) 217 330 3.3E-19 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Thivi_0223 2265367f616742027231f7775158b4bb 333 Gene3D G3DSA:3.30.930.10 9 333 3.0E-94 T 13-10-2018 Thivi_0223 2265367f616742027231f7775158b4bb 333 SUPERFAMILY SSF55681 12 330 2.7E-71 T 13-10-2018 Thivi_3820 b7e693b8653e6e89afe51a4d6d9457d9 144 Gene3D G3DSA:3.30.2020.30 1 98 9.8E-28 T 13-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Thivi_3820 b7e693b8653e6e89afe51a4d6d9457d9 144 Pfam PF06155 Protein of unknown function (DUF971) 10 94 9.0E-28 T 13-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 142 170 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 21 182 1.4E-72 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 Gene3D G3DSA:2.160.10.10 83 198 6.2E-38 T 13-10-2018 Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 SUPERFAMILY SSF51161 18 187 5.68E-56 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 124 9.8E-5 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 168 2.3E-8 T 13-10-2018 IPR001451 Hexapeptide repeat Thivi_1637 cf80fadf72cc7620614af04c7dc57cec 243 Gene3D G3DSA:1.10.3130.10 11 82 3.3E-24 T 13-10-2018 Thivi_2237 b3ce5ceaa83973bd0e720e7edd2441b8 149 SUPERFAMILY SSF55804 4 147 6.41E-37 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Thivi_2237 b3ce5ceaa83973bd0e720e7edd2441b8 149 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain Thivi_2237 b3ce5ceaa83973bd0e720e7edd2441b8 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 4.5E-33 T 13-10-2018 IPR002178 PTS EIIA type-2 domain Thivi_2237 b3ce5ceaa83973bd0e720e7edd2441b8 149 Gene3D G3DSA:3.40.930.10 2 149 1.7E-46 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 430 1.9E-112 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 434 5.2E-118 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 Gene3D G3DSA:3.65.10.10 27 236 1.6E-149 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 ProSitePatterns PS00104 EPSP synthase signature 1. 94 108 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 438 31.952 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 Gene3D G3DSA:3.65.10.10 19 429 1.6E-149 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 PIRSF PIRSF000505 7 441 1.9E-110 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Thivi_0303 b47711c25bab3782e6a5114a9c12c426 444 SUPERFAMILY SSF55205 10 436 5.07E-122 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 SUPERFAMILY SSF53732 3 623 8.63E-218 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Pfam PF00694 Aconitase C-terminal domain 688 814 2.0E-47 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 885 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Pfam PF00330 Aconitase family (aconitate hydratase) 63 558 5.7E-178 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Gene3D G3DSA:3.30.499.10 368 586 1.5E-92 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Gene3D G3DSA:3.20.19.10 649 887 7.6E-109 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 273 286 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 211 226 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 140 153 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 427 438 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 367 381 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 164 172 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 287 300 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 489 502 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 PRINTS PR00415 Aconitase family signature 197 210 3.9E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 ProSitePatterns PS00450 Aconitase family signature 1. 423 439 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 SUPERFAMILY SSF52016 626 885 1.31E-90 T 13-10-2018 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Gene3D G3DSA:1.10.1440.20 587 648 1.9E-18 T 13-10-2018 Thivi_1892 7ed9ecc71edfe166e7c561710858300d 887 Gene3D G3DSA:3.30.499.20 4 367 3.2E-157 T 13-10-2018 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 SUPERFAMILY SSF111148 1 89 2.22E-39 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 PIRSF PIRSF029827 1 90 1.5E-40 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 Gene3D G3DSA:1.10.3880.10 1 90 3.6E-41 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 64 2.0E-23 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 29.6 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Thivi_3750 b99ff7f653e819016540b4422eb3be6b 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.8E-43 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Thivi_0351 d3b036a42932cffaeba44439f9a490a4 292 Pfam PF00691 OmpA family 167 257 6.6E-14 T 13-10-2018 IPR006665 OmpA-like domain Thivi_0351 d3b036a42932cffaeba44439f9a490a4 292 SUPERFAMILY SSF103088 165 269 1.83E-20 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0351 d3b036a42932cffaeba44439f9a490a4 292 Gene3D G3DSA:3.30.1330.60 106 284 3.1E-52 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0351 d3b036a42932cffaeba44439f9a490a4 292 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 17 64 1.0E-16 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 13-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 Gene3D G3DSA:2.30.40.10 4 480 2.3E-295 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 SUPERFAMILY SSF51338 2 177 2.44E-60 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 4.9E-289 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 2.5E-53 T 13-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 Gene3D G3DSA:3.20.20.140 129 567 2.3E-295 T 13-10-2018 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 SUPERFAMILY SSF51556 129 567 3.06E-201 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 57.156 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 5.6E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 5.6E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 5.6E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 5.6E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 13-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2083 17cdafc7950c37638f810c24cf8750d4 567 Pfam PF01979 Amidohydrolase family 125 453 3.6E-80 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 Gene3D G3DSA:3.90.1580.10 193 350 1.9E-26 T 13-10-2018 Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 SUPERFAMILY SSF56436 188 429 4.71E-66 T 13-10-2018 IPR016187 C-type lectin fold Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 SUPERFAMILY SSF109854 10 154 1.37E-5 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 21 428 6.9E-165 T 13-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 351 428 1.8E-8 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 192 343 2.2E-23 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 Pfam PF12867 DinB superfamily 22 157 4.2E-8 T 13-10-2018 IPR024775 DinB-like domain Thivi_3282 d4800f4667adf770c3369bd12b5340fb 432 Gene3D G3DSA:3.90.1580.10 351 430 1.2E-9 T 13-10-2018 Thivi_1642 c2d9d978daf649e20c8e8c551ea4fab8 86 SMART SM00966 4 49 5.7E-11 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1642 c2d9d978daf649e20c8e8c551ea4fab8 86 Gene3D G3DSA:2.10.260.10 1 42 4.3E-12 T 13-10-2018 Thivi_1642 c2d9d978daf649e20c8e8c551ea4fab8 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 48 4.0E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1642 c2d9d978daf649e20c8e8c551ea4fab8 86 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 44 4.3E-14 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1642 c2d9d978daf649e20c8e8c551ea4fab8 86 SUPERFAMILY SSF89447 1 46 4.88E-12 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_3325 d2945bdac4754a80c5281497c408e479 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 2.7E-35 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 Thivi_3325 d2945bdac4754a80c5281497c408e479 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 1.7E-37 T 13-10-2018 IPR013527 YicC-like, N-terminal Thivi_3325 d2945bdac4754a80c5281497c408e479 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 6.3E-90 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Thivi_2384 24bf5ff6b9555dfd7deb989a034de4fe 277 Gene3D G3DSA:2.40.128.270 150 266 4.1E-24 T 13-10-2018 IPR038670 HslJ-like superfamily Thivi_2384 24bf5ff6b9555dfd7deb989a034de4fe 277 Gene3D G3DSA:2.40.128.270 32 149 8.4E-26 T 13-10-2018 IPR038670 HslJ-like superfamily Thivi_2384 24bf5ff6b9555dfd7deb989a034de4fe 277 Pfam PF03724 META domain 151 265 2.8E-26 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ Thivi_2384 24bf5ff6b9555dfd7deb989a034de4fe 277 Pfam PF03724 META domain 34 145 2.0E-26 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ Thivi_0773 9a04140c5ba5e92c1fb258a76f13501d 142 Pfam PF03646 FlaG protein 57 132 1.6E-21 T 13-10-2018 IPR005186 FlaG protein Thivi_0773 9a04140c5ba5e92c1fb258a76f13501d 142 Gene3D G3DSA:3.30.160.170 43 133 4.6E-17 T 13-10-2018 IPR035924 FlaG-like superfamily Thivi_0773 9a04140c5ba5e92c1fb258a76f13501d 142 SUPERFAMILY SSF160214 59 132 1.44E-20 T 13-10-2018 IPR035924 FlaG-like superfamily Thivi_3052 b44011049fc9b147158b228aa4230260 243 Gene3D G3DSA:3.60.15.10 125 239 3.7E-25 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_3052 b44011049fc9b147158b228aa4230260 243 Gene3D G3DSA:3.60.15.10 1 120 1.2E-28 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_3052 b44011049fc9b147158b228aa4230260 243 SMART SM00849 23 209 9.5E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_3052 b44011049fc9b147158b228aa4230260 243 Pfam PF00753 Metallo-beta-lactamase superfamily 25 93 6.8E-14 T 13-10-2018 IPR001279 Metallo-beta-lactamase Thivi_3052 b44011049fc9b147158b228aa4230260 243 SUPERFAMILY SSF56281 8 238 9.04E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Thivi_0195 04379f7543577fa00c7b76016d1d611d 545 SUPERFAMILY SSF53098 152 331 1.34E-12 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0195 04379f7543577fa00c7b76016d1d611d 545 Gene3D G3DSA:3.30.420.10 151 345 4.8E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_1341 04379f7543577fa00c7b76016d1d611d 545 SUPERFAMILY SSF53098 152 331 1.34E-12 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1341 04379f7543577fa00c7b76016d1d611d 545 Gene3D G3DSA:3.30.420.10 151 345 4.8E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_3999 5a46208d0ec57f030036b9439ad1e152 157 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 136 1.0E-42 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Thivi_3999 5a46208d0ec57f030036b9439ad1e152 157 Gene3D G3DSA:3.40.50.300 1 150 2.2E-42 T 13-10-2018 Thivi_3999 5a46208d0ec57f030036b9439ad1e152 157 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 6 128 7.8E-37 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Thivi_3999 5a46208d0ec57f030036b9439ad1e152 157 SUPERFAMILY SSF52540 25 123 1.3E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4547 5051fb3804d199eebd7764f0894f9187 316 Gene3D G3DSA:3.40.50.1820 24 311 5.0E-77 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4547 5051fb3804d199eebd7764f0894f9187 316 TIGRFAM TIGR03056 bchO_mg_che_rel: putative magnesium chelatase accessory protein 34 305 1.6E-92 T 13-10-2018 IPR017497 Putative magnesium chelatase accessory protein KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_4547 5051fb3804d199eebd7764f0894f9187 316 Pfam PF12697 Alpha/beta hydrolase family 62 302 2.3E-21 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_4547 5051fb3804d199eebd7764f0894f9187 316 SUPERFAMILY SSF53474 40 306 1.32E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1841 497b60bd67816abe0a2c0460af0d4667 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 36.8 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Thivi_1841 497b60bd67816abe0a2c0460af0d4667 165 SUPERFAMILY SSF52833 1 163 3.79E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1841 497b60bd67816abe0a2c0460af0d4667 165 Pfam PF08534 Redoxin 21 162 3.8E-28 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Thivi_1841 497b60bd67816abe0a2c0460af0d4667 165 Gene3D G3DSA:3.40.30.10 2 165 3.2E-47 T 13-10-2018 Thivi_1841 497b60bd67816abe0a2c0460af0d4667 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 251 538 1.1E-131 T 13-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 Pfam PF13646 HEAT repeats 186 243 1.6E-8 T 13-10-2018 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 Pfam PF02653 Branched-chain amino acid transport system / permease component 253 524 2.0E-52 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 SMART SM00567 E-Z type HEAT repeats 143 172 410.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 SMART SM00567 E-Z type HEAT repeats 48 77 24.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 SMART SM00567 E-Z type HEAT repeats 195 224 28.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 Gene3D G3DSA:1.25.10.10 123 253 2.7E-5 T 13-10-2018 IPR011989 Armadillo-like helical Thivi_2091 190aaa136c6bb48a56ce7c3b0e55f2e5 542 SUPERFAMILY SSF48371 136 241 4.15E-9 T 13-10-2018 IPR016024 Armadillo-type fold Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 SUPERFAMILY SSF64518 121 607 3.92E-14 T 13-10-2018 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 Pfam PF00460 Flagella basal body rod protein 4 33 8.9E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 746 804 5.6E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 318 3.6E-78 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 SUPERFAMILY SSF64518 558 804 1.7E-21 T 13-10-2018 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 214 232 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0404 c6776a31fef5e17ae26c1709226d48cf 809 PRINTS PR01005 Flagellar hook-associated protein signature 357 379 5.9E-18 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Thivi_0537 29b87e0f2326115ca94ff75f3d249b74 417 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 123 324 1.1E-33 T 13-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like Thivi_0537 29b87e0f2326115ca94ff75f3d249b74 417 Gene3D G3DSA:3.40.50.1820 127 310 1.0E-8 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0537 29b87e0f2326115ca94ff75f3d249b74 417 SUPERFAMILY SSF53474 131 258 1.2E-10 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0342 47afc7d096cca027b557941d7a0c853f 246 Pfam PF12118 SprA-related family 47 181 5.5E-39 T 13-10-2018 IPR021973 SprA-related family Thivi_0759 9d6806afe8426f10db67f1e6ce9e433d 240 SMART SM00382 45 233 8.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0759 9d6806afe8426f10db67f1e6ce9e433d 240 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0759 9d6806afe8426f10db67f1e6ce9e433d 240 Pfam PF00005 ABC transporter 36 184 7.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0759 9d6806afe8426f10db67f1e6ce9e433d 240 SUPERFAMILY SSF52540 16 238 1.3E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0759 9d6806afe8426f10db67f1e6ce9e433d 240 Gene3D G3DSA:3.40.50.300 14 240 5.2E-63 T 13-10-2018 Thivi_1644 290d003dd3a85b213b78cf68180ce800 168 Gene3D G3DSA:2.30.110.10 14 166 1.8E-46 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Thivi_1644 290d003dd3a85b213b78cf68180ce800 168 SUPERFAMILY SSF50475 14 165 8.79E-45 T 13-10-2018 Thivi_1644 290d003dd3a85b213b78cf68180ce800 168 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 25 163 4.1E-25 T 13-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 PIRSF PIRSF002799 1 713 1.1E-277 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 SUPERFAMILY SSF53955 135 336 6.75E-63 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Gene3D G3DSA:1.10.3810.10 136 338 7.3E-250 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 SUPERFAMILY SSF56601 297 709 1.14E-108 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Pfam PF14814 Bifunctional transglycosylase second domain 48 132 2.5E-27 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Gene3D G3DSA:3.40.710.10 38 698 7.3E-250 T 13-10-2018 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Gene3D G3DSA:3.30.2060.10 46 135 7.3E-250 T 13-10-2018 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Pfam PF00912 Transglycosylase 139 315 3.4E-55 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 Pfam PF00905 Penicillin binding protein transpeptidase domain 411 649 6.5E-23 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_3347 d516f164d5138a8aca77088cd20cb1ee 780 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 12 701 2.2E-253 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_4292 2b32e1a47d38e479c4e1abe9bef5f636 114 PIRSF PIRSF005790 1 107 8.9E-31 T 13-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Thivi_4292 2b32e1a47d38e479c4e1abe9bef5f636 114 Pfam PF03206 Nitrogen fixation protein NifW 9 103 2.6E-33 T 13-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Thivi_4292 2b32e1a47d38e479c4e1abe9bef5f636 114 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 4 105 20.535 T 13-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 Thivi_2054 db16f375e7947b2c21f0406342e9f1a3 265 SUPERFAMILY SSF81606 23 259 4.05E-48 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2054 db16f375e7947b2c21f0406342e9f1a3 265 Pfam PF13672 Protein phosphatase 2C 38 222 7.4E-15 T 13-10-2018 Thivi_2054 db16f375e7947b2c21f0406342e9f1a3 265 Gene3D G3DSA:3.60.40.10 21 257 2.2E-48 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2054 db16f375e7947b2c21f0406342e9f1a3 265 SMART SM00331 29 258 1.5E-12 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2054 db16f375e7947b2c21f0406342e9f1a3 265 SMART SM00332 13 256 6.2E-7 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_3229 ccc5f185080588a04b11816397cee625 425 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 3.3E-174 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_3229 ccc5f185080588a04b11816397cee625 425 SUPERFAMILY SSF55205 1 417 4.25E-138 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Thivi_3229 ccc5f185080588a04b11816397cee625 425 Gene3D G3DSA:3.65.10.10 6 413 8.7E-163 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Thivi_3229 ccc5f185080588a04b11816397cee625 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 406 2.3E-111 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Thivi_3229 ccc5f185080588a04b11816397cee625 425 Gene3D G3DSA:3.65.10.10 21 228 8.7E-163 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Thivi_3229 ccc5f185080588a04b11816397cee625 425 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.347 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Thivi_0885 13b30577c97aab3c97f8f7786040abba 187 Gene3D G3DSA:2.60.120.10 8 185 1.0E-55 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_0885 13b30577c97aab3c97f8f7786040abba 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 10 178 5.8E-53 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Thivi_0885 13b30577c97aab3c97f8f7786040abba 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 12 176 9.0E-57 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Thivi_0885 13b30577c97aab3c97f8f7786040abba 187 SUPERFAMILY SSF51182 7 182 3.15E-59 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 SUPERFAMILY SSF74650 42 411 1.57E-151 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 PIRSF PIRSF006281 16 520 4.0E-188 T 13-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 SUPERFAMILY SSF81296 417 518 7.84E-26 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 Gene3D G3DSA:2.70.98.10 41 413 1.2E-162 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 42 517 1.9E-194 T 13-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Thivi_1276 e296434a9d262ff73b3278a38e86a4e9 520 Gene3D G3DSA:2.60.40.10 417 520 6.9E-24 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_1263 a3eccbc29c50ae6cfa537426c3c8679e 331 Pfam PF01136 Peptidase family U32 75 329 1.4E-64 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Thivi_1263 a3eccbc29c50ae6cfa537426c3c8679e 331 SUPERFAMILY SSF51366 10 130 6.59E-5 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_1263 a3eccbc29c50ae6cfa537426c3c8679e 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Thivi_2632 f52c8c5378e79af9d1c5abc1bfb2515d 375 Gene3D G3DSA:3.40.50.2000 175 352 9.2E-53 T 13-10-2018 Thivi_2632 f52c8c5378e79af9d1c5abc1bfb2515d 375 Gene3D G3DSA:3.40.50.2000 18 355 9.2E-53 T 13-10-2018 Thivi_2632 f52c8c5378e79af9d1c5abc1bfb2515d 375 Pfam PF00534 Glycosyl transferases group 1 197 339 1.2E-29 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_2632 f52c8c5378e79af9d1c5abc1bfb2515d 375 SUPERFAMILY SSF53756 6 362 2.79E-63 T 13-10-2018 Thivi_2632 f52c8c5378e79af9d1c5abc1bfb2515d 375 Pfam PF13579 Glycosyl transferase 4-like domain 17 173 8.2E-12 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_1326 a6b1e97201219e1984ed8278881afc62 135 Gene3D G3DSA:2.170.150.20 1 134 5.9E-63 T 13-10-2018 Thivi_1326 a6b1e97201219e1984ed8278881afc62 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 8 131 37.081 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Thivi_1326 a6b1e97201219e1984ed8278881afc62 135 SUPERFAMILY SSF51316 6 133 6.8E-60 T 13-10-2018 IPR011057 Mss4-like superfamily Thivi_1326 a6b1e97201219e1984ed8278881afc62 135 Pfam PF01641 SelR domain 11 130 1.3E-55 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Thivi_1326 a6b1e97201219e1984ed8278881afc62 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 131 9.4E-56 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Thivi_3530 f5f35f9018ca2f5b14123f6285254851 206 Pfam PF02924 Bacteriophage lambda head decoration protein D 25 195 1.6E-7 T 13-10-2018 IPR004195 Head decoration protein D Thivi_2991 b02352e4a124f69739cede73e10567d9 518 SUPERFAMILY SSF53448 91 334 1.97E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2991 b02352e4a124f69739cede73e10567d9 518 Pfam PF13641 Glycosyltransferase like family 2 89 318 5.8E-24 T 13-10-2018 Thivi_2991 b02352e4a124f69739cede73e10567d9 518 Gene3D G3DSA:3.90.550.10 81 304 3.5E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1008 4362f0f67461fedfc2113e899288e84c 143 Gene3D G3DSA:3.40.50.10110 1 141 3.5E-44 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Thivi_1008 4362f0f67461fedfc2113e899288e84c 143 SUPERFAMILY SSF102400 1 141 3.53E-44 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Thivi_1008 4362f0f67461fedfc2113e899288e84c 143 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 136 2.0E-42 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Gene3D G3DSA:3.30.70.1170 194 251 1.2E-14 T 13-10-2018 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 30 452 6.4E-124 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Gene3D G3DSA:1.10.287.730 167 193 8.1E-8 T 13-10-2018 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 SUPERFAMILY SSF48013 26 170 1.57E-27 T 13-10-2018 IPR035926 NusB-like superfamily Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Gene3D G3DSA:3.40.50.150 252 455 6.2E-62 T 13-10-2018 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 SUPERFAMILY SSF53335 163 454 1.84E-71 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Gene3D G3DSA:1.10.940.10 23 165 1.6E-35 T 13-10-2018 IPR035926 NusB-like superfamily Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 338 349 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 167 256 1.6E-7 T 13-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Pfam PF01029 NusB family 26 147 2.1E-18 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 Pfam PF01189 16S rRNA methyltransferase RsmB/F 261 451 2.1E-59 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 243 257 9.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 437 454 9.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 389 405 9.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 272 282 9.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_3196 35bc9939a61e94ad892028e413f0534a 457 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 339 351 9.3E-28 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 Gene3D G3DSA:3.40.50.10490 95 289 2.0E-231 T 13-10-2018 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 Gene3D G3DSA:3.40.50.10490 10 504 2.0E-231 T 13-10-2018 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 2.1E-55 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 42.322 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 Gene3D G3DSA:1.10.1390.10 505 546 1.5E-17 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 SUPERFAMILY SSF53697 5 545 1.08E-219 T 13-10-2018 Thivi_0105 fd294959fa4fb7cbdc4250b6ee5333cf 548 Pfam PF00342 Phosphoglucose isomerase 49 539 3.9E-234 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Thivi_0948 d09ba1bd61760567c4107ed165e71b63 360 SUPERFAMILY SSF55073 53 234 3.3E-57 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0948 d09ba1bd61760567c4107ed165e71b63 360 Pfam PF07238 PilZ domain 249 355 1.3E-5 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_0948 d09ba1bd61760567c4107ed165e71b63 360 SMART SM00044 20 215 7.8E-13 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Thivi_0948 d09ba1bd61760567c4107ed165e71b63 360 Gene3D G3DSA:3.30.70.1230 50 245 2.0E-63 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0948 d09ba1bd61760567c4107ed165e71b63 360 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 54 230 2.1E-33 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Thivi_2431 f12f1a56a6b5e1795c30d4771510c5df 104 Pfam PF08895 Domain of unknown function (DUF1840) 1 102 1.4E-32 T 13-10-2018 IPR014991 Protein of unknown function DUF1840 Thivi_3617 30c53d944c96117aee2817c210b8b93d 212 SUPERFAMILY SSF52507 8 205 2.09E-56 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Thivi_3617 30c53d944c96117aee2817c210b8b93d 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 10 203 4.8E-58 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Thivi_3617 30c53d944c96117aee2817c210b8b93d 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 8 205 34.961 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Thivi_3617 30c53d944c96117aee2817c210b8b93d 212 Pfam PF02441 Flavoprotein 8 184 1.9E-23 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Thivi_3617 30c53d944c96117aee2817c210b8b93d 212 Gene3D G3DSA:3.40.50.1950 6 208 2.9E-77 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 Pfam PF00557 Metallopeptidase family M24 180 411 3.2E-70 T 13-10-2018 IPR000994 Peptidase M24 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 347 359 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 SUPERFAMILY SSF53092 1 173 3.35E-52 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 252 268 8.1E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 8.1E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 SMART SM01011 1 135 1.1E-62 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 124 1.6E-38 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 Gene3D G3DSA:3.90.230.10 172 438 1.6E-104 T 13-10-2018 Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 Gene3D G3DSA:3.40.350.10 1 170 1.7E-54 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Thivi_3385 67fe8c8fa6fa457d864f9c65820dff6b 439 SUPERFAMILY SSF55920 174 434 3.01E-92 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like Thivi_4215 0074ea1c01520e170716816ac07b6710 131 Gene3D G3DSA:3.30.1370.30 2 73 3.8E-25 T 13-10-2018 Thivi_4215 0074ea1c01520e170716816ac07b6710 131 Gene3D G3DSA:3.30.1490.10 75 130 4.0E-23 T 13-10-2018 Thivi_4215 0074ea1c01520e170716816ac07b6710 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4215 0074ea1c01520e170716816ac07b6710 131 SUPERFAMILY SSF56047 2 130 1.15E-44 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4215 0074ea1c01520e170716816ac07b6710 131 Pfam PF00410 Ribosomal protein S8 5 130 1.8E-44 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4215 0074ea1c01520e170716816ac07b6710 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 29.78 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_0739 bc38d79e0c5165c63ef686715be0d376 307 SUPERFAMILY SSF74650 22 280 1.13E-60 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Thivi_0739 bc38d79e0c5165c63ef686715be0d376 307 PIRSF PIRSF016020 23 294 2.3E-47 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 Thivi_0739 bc38d79e0c5165c63ef686715be0d376 307 Pfam PF01263 Aldose 1-epimerase 28 289 4.8E-32 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Thivi_0739 bc38d79e0c5165c63ef686715be0d376 307 Gene3D G3DSA:2.70.98.10 3 301 8.3E-78 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Thivi_3583 545a2d74cb01ae8c322a661331fe4519 287 Pfam PF02219 Methylenetetrahydrofolate reductase 7 277 1.5E-87 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Thivi_3583 545a2d74cb01ae8c322a661331fe4519 287 Gene3D G3DSA:3.20.20.220 1 286 1.4E-99 T 13-10-2018 Thivi_3583 545a2d74cb01ae8c322a661331fe4519 287 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 11 281 2.8E-97 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Thivi_3583 545a2d74cb01ae8c322a661331fe4519 287 SUPERFAMILY SSF51730 5 282 1.96E-95 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 Gene3D G3DSA:3.30.70.150 14 139 8.4E-50 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 SUPERFAMILY SSF51649 142 468 1.83E-145 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 1 467 60.102 T 13-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 Gene3D G3DSA:3.20.20.110 142 472 4.8E-156 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 136 8.7E-45 T 13-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 146 454 2.5E-131 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 SUPERFAMILY SSF54966 3 140 7.33E-56 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1570 dbf561eb126694608cbc5dc65394935b 472 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 188 196 - T 13-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 SUPERFAMILY SSF69593 697 922 4.84E-40 T 13-10-2018 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 ProSitePatterns PS00455 Putative AMP-binding domain signature. 274 285 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Gene3D G3DSA:3.30.300.30 553 670 3.1E-27 T 13-10-2018 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Pfam PF01553 Acyltransferase 742 868 4.5E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 743 868 2.0E-31 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 SUPERFAMILY SSF47336 21 81 1.57E-8 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Pfam PF00501 AMP-binding enzyme 120 558 4.2E-83 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Gene3D G3DSA:3.40.50.12780 105 552 9.0E-143 T 13-10-2018 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Pfam PF00550 Phosphopantetheine attachment site 18 79 9.0E-7 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 SUPERFAMILY SSF56801 109 661 5.36E-119 T 13-10-2018 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 SMART SM00563 757 871 2.7E-34 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_1799 62b4aeeec778d0c1f358729435304a6a 929 Gene3D G3DSA:1.10.1200.10 7 104 6.9E-9 T 13-10-2018 IPR036736 ACP-like superfamily Thivi_0645 4444eea501ab5bfb753a9c3e96592c28 295 SMART SM00062 44 283 7.4E-12 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0645 4444eea501ab5bfb753a9c3e96592c28 295 SUPERFAMILY SSF53850 8 281 2.76E-27 T 13-10-2018 Thivi_0645 4444eea501ab5bfb753a9c3e96592c28 295 Gene3D G3DSA:3.40.190.10 51 280 5.7E-27 T 13-10-2018 Thivi_0645 4444eea501ab5bfb753a9c3e96592c28 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 105 280 8.2E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Thivi_0645 4444eea501ab5bfb753a9c3e96592c28 295 Gene3D G3DSA:3.40.190.10 131 242 5.7E-27 T 13-10-2018 Thivi_3593 039ce2650bd1a702411653f68978176a 218 SUPERFAMILY SSF46785 147 215 3.67E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3593 039ce2650bd1a702411653f68978176a 218 ProSitePatterns PS00042 Crp-type HTH domain signature. 176 199 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Thivi_3593 039ce2650bd1a702411653f68978176a 218 Pfam PF00027 Cyclic nucleotide-binding domain 24 112 3.9E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3593 039ce2650bd1a702411653f68978176a 218 Pfam PF00325 Bacterial regulatory proteins, crp family 174 204 1.6E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3593 039ce2650bd1a702411653f68978176a 218 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 4.9E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3593 039ce2650bd1a702411653f68978176a 218 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 4.9E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3593 039ce2650bd1a702411653f68978176a 218 Gene3D G3DSA:1.10.10.10 147 215 6.0E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3593 039ce2650bd1a702411653f68978176a 218 SUPERFAMILY SSF51206 11 144 2.09E-21 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_3593 039ce2650bd1a702411653f68978176a 218 SMART SM00419 168 216 8.9E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Thivi_3593 039ce2650bd1a702411653f68978176a 218 SMART SM00100 3 125 7.0E-11 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain Thivi_3593 039ce2650bd1a702411653f68978176a 218 Gene3D G3DSA:2.60.120.10 13 146 7.8E-38 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_1930 d7571cc346e9c1e0ef298f3ec720df59 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 5.0E-89 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_1930 d7571cc346e9c1e0ef298f3ec720df59 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.196 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_1930 d7571cc346e9c1e0ef298f3ec720df59 193 PIRSF PIRSF006102 1 193 9.6E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_1930 d7571cc346e9c1e0ef298f3ec720df59 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 2.6E-62 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_4470 0579072f3e00e7b478f8088ce2445373 202 Pfam PF09626 Dihaem cytochrome c 59 187 3.5E-32 T 13-10-2018 IPR018588 Dihaem cytochrome c Thivi_0801 0d0028fa70b8342b114459c6482fa5cf 294 Pfam PF00665 Integrase core domain 124 237 7.9E-25 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_0801 0d0028fa70b8342b114459c6482fa5cf 294 SUPERFAMILY SSF53098 116 279 7.28E-38 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0801 0d0028fa70b8342b114459c6482fa5cf 294 Gene3D G3DSA:3.30.420.10 121 280 3.3E-9 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_0801 0d0028fa70b8342b114459c6482fa5cf 294 Pfam PF13276 HTH-like domain 49 99 6.6E-11 T 13-10-2018 IPR025948 HTH-like domain Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 SMART SM01091 357 435 4.0E-13 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 Gene3D G3DSA:3.30.465.10 355 440 6.1E-13 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 Gene3D G3DSA:3.10.580.10 206 354 2.7E-37 T 13-10-2018 Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 Pfam PF01595 Domain of unknown function DUF21 9 209 1.1E-43 T 13-10-2018 IPR002550 CNNM, transmembrane domain Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 SUPERFAMILY SSF54631 214 346 8.66E-21 T 13-10-2018 Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 SUPERFAMILY SSF56176 355 434 3.82E-14 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 Pfam PF00571 CBS domain 292 340 1.6E-5 T 13-10-2018 IPR000644 CBS domain Thivi_2989 2288ceee4dbdaeb8fc494fdd6a6fc705 444 Pfam PF03471 Transporter associated domain 361 433 3.0E-12 T 13-10-2018 IPR005170 Transporter-associated domain Thivi_0843 49201b306cabef15dcbf4ee0c4a104a4 296 SUPERFAMILY SSF56317 5 289 1.29E-86 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_0843 49201b306cabef15dcbf4ee0c4a104a4 296 Gene3D G3DSA:3.60.110.10 3 293 3.6E-98 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_0843 49201b306cabef15dcbf4ee0c4a104a4 296 Pfam PF00795 Carbon-nitrogen hydrolase 7 274 1.9E-59 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Thivi_0341 d3142d078db8611d0674284921ecd8d2 619 Gene3D G3DSA:3.30.70.1070 522 617 4.0E-19 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_0341 d3142d078db8611d0674284921ecd8d2 619 Pfam PF05036 Sporulation related domain 540 609 3.0E-5 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Thivi_0341 d3142d078db8611d0674284921ecd8d2 619 SUPERFAMILY SSF52540 32 254 4.57E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0464 aa2293f706632ec8d85e9d7a4487b268 147 Pfam PF01850 PIN domain 7 123 2.1E-13 T 13-10-2018 IPR002716 PIN domain Thivi_0464 aa2293f706632ec8d85e9d7a4487b268 147 Gene3D G3DSA:3.40.50.1010 5 137 6.3E-11 T 13-10-2018 Thivi_0464 aa2293f706632ec8d85e9d7a4487b268 147 SUPERFAMILY SSF88723 3 130 1.96E-19 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_2535 23654f617a9bd1becb22460b5c966117 300 SUPERFAMILY SSF103088 185 297 2.09E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 280 300 1.0E-6 T 13-10-2018 Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 260 279 1.0E-6 T 13-10-2018 Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 259 1.0E-6 T 13-10-2018 Thivi_2535 23654f617a9bd1becb22460b5c966117 300 Gene3D G3DSA:3.30.1330.60 160 300 3.3E-36 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_2535 23654f617a9bd1becb22460b5c966117 300 Pfam PF00691 OmpA family 197 291 1.4E-20 T 13-10-2018 IPR006665 OmpA-like domain Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01021 OMPA domain signature 242 258 4.3E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01021 OMPA domain signature 197 219 4.3E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_2535 23654f617a9bd1becb22460b5c966117 300 PRINTS PR01021 OMPA domain signature 227 242 4.3E-8 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 SUPERFAMILY SSF56801 63 416 6.54E-60 T 13-10-2018 Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 Pfam PF14535 AMP-binding enzyme C-terminal domain 356 452 2.2E-29 T 13-10-2018 IPR028154 AMP-dependent ligase, C-terminal Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 PIRSF PIRSF006444 20 454 9.1E-185 T 13-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 Pfam PF00501 AMP-binding enzyme 101 307 5.9E-14 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 Gene3D G3DSA:3.30.300.30 348 453 6.8E-32 T 13-10-2018 Thivi_2396 4a9d8c4486be2d11189046d2e417d621 459 Gene3D G3DSA:3.40.50.12780 19 347 1.8E-124 T 13-10-2018 Thivi_0579 220298a770c5029fc179e0f417ff2860 535 Gene3D G3DSA:3.40.50.410 366 527 2.2E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_0579 220298a770c5029fc179e0f417ff2860 535 SMART SM00327 363 531 5.1E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_0579 220298a770c5029fc179e0f417ff2860 535 Pfam PF00092 von Willebrand factor type A domain 368 503 5.0E-5 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_0579 220298a770c5029fc179e0f417ff2860 535 Pfam PF06213 Cobalamin biosynthesis protein CobT 8 243 6.0E-17 T 13-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Thivi_0579 220298a770c5029fc179e0f417ff2860 535 SUPERFAMILY SSF53300 365 502 3.56E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3689 a33be45798511fce854228f3cf213166 293 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 279 3.4E-15 T 13-10-2018 IPR000014 PAS domain Thivi_3689 a33be45798511fce854228f3cf213166 293 Gene3D G3DSA:3.30.450.20 149 292 9.6E-23 T 13-10-2018 Thivi_3689 a33be45798511fce854228f3cf213166 293 SMART SM00086 232 274 8.4E-4 T 13-10-2018 IPR001610 PAC motif Thivi_3689 a33be45798511fce854228f3cf213166 293 SUPERFAMILY SSF52172 6 150 2.13E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3689 a33be45798511fce854228f3cf213166 293 Pfam PF13426 PAS domain 168 272 7.0E-13 T 13-10-2018 IPR000014 PAS domain Thivi_3689 a33be45798511fce854228f3cf213166 293 SMART SM00448 7 123 8.1E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3689 a33be45798511fce854228f3cf213166 293 SMART SM00091 156 222 3.0E-9 T 13-10-2018 IPR000014 PAS domain Thivi_3689 a33be45798511fce854228f3cf213166 293 Pfam PF00072 Response regulator receiver domain 10 123 1.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3689 a33be45798511fce854228f3cf213166 293 Gene3D G3DSA:3.40.50.2300 7 148 1.9E-34 T 13-10-2018 Thivi_3689 a33be45798511fce854228f3cf213166 293 SUPERFAMILY SSF55785 147 272 4.05E-20 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 Gene3D G3DSA:1.10.45.10 434 474 1.1E-6 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 Pfam PF01565 FAD binding domain 58 197 1.0E-42 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 SUPERFAMILY SSF56176 22 233 8.88E-70 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 Gene3D G3DSA:3.30.70.2740 352 433 3.0E-8 T 13-10-2018 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 Gene3D G3DSA:3.30.465.40 20 250 1.9E-68 T 13-10-2018 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 Pfam PF02913 FAD linked oxidases, C-terminal domain 233 472 2.2E-67 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Thivi_1576 9efb2de2bd6a88f69753d43ecee87c11 495 SUPERFAMILY SSF55103 206 476 2.13E-78 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Thivi_0205 b9f003177cc9d1ecce829996536c976f 324 Pfam PF01145 SPFH domain / Band 7 family 25 257 5.2E-20 T 13-10-2018 IPR001107 Band 7 domain Thivi_0205 b9f003177cc9d1ecce829996536c976f 324 SMART SM00244 21 240 0.0015 T 13-10-2018 IPR001107 Band 7 domain Thivi_0037 671e912868ae0cf1f52a03b6ac18480c 227 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 22 169 3.7E-20 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Thivi_0037 671e912868ae0cf1f52a03b6ac18480c 227 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 8 225 1.3E-47 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 SUPERFAMILY SSF102114 43 435 2.88E-103 T 13-10-2018 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 34 442 4.5E-119 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 Gene3D G3DSA:1.10.10.920 370 450 1.8E-5 T 13-10-2018 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 SMART SM00729 56 277 1.4E-40 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 Pfam PF04055 Radical SAM superfamily 62 233 2.9E-16 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 Gene3D G3DSA:3.80.30.20 11 368 1.5E-99 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Thivi_2400 b2a81b1a3ea0761b1ab4d385e7d773f2 453 PIRSF PIRSF000167 27 446 1.3E-130 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Thivi_4484 d28f559b98ece6e508caec1618e0f80f 435 Gene3D G3DSA:3.20.110.20 4 349 6.9E-65 T 13-10-2018 Thivi_4484 d28f559b98ece6e508caec1618e0f80f 435 Pfam PF03065 Glycosyl hydrolase family 57 10 319 2.4E-33 T 13-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Thivi_4484 d28f559b98ece6e508caec1618e0f80f 435 SUPERFAMILY SSF88713 6 300 1.69E-50 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 Gene3D G3DSA:1.20.272.10 214 335 2.7E-25 T 13-10-2018 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 215 326 1.4E-7 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 Gene3D G3DSA:1.10.8.60 143 211 1.8E-20 T 13-10-2018 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 SUPERFAMILY SSF52540 2 209 8.23E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 SUPERFAMILY SSF48019 211 332 8.67E-23 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 325 5.1E-80 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.0E-25 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Thivi_0984 786d9e9f315069cc1247dbdf91679193 344 Gene3D G3DSA:3.40.50.300 1 138 5.2E-43 T 13-10-2018 Thivi_2913 562c2917261ab978aac0182dc8a287f7 670 Pfam PF00361 Proton-conducting membrane transporter 136 422 1.2E-57 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2913 562c2917261ab978aac0182dc8a287f7 670 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 4.5E-7 T 13-10-2018 Thivi_2913 562c2917261ab978aac0182dc8a287f7 670 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 4.5E-7 T 13-10-2018 Thivi_2913 562c2917261ab978aac0182dc8a287f7 670 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 4.5E-7 T 13-10-2018 Thivi_0653 991089112ab17f929084e0c6a5b2509a 317 SMART SM00382 26 208 3.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0653 991089112ab17f929084e0c6a5b2509a 317 SUPERFAMILY SSF52540 2 223 4.55E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0653 991089112ab17f929084e0c6a5b2509a 317 Pfam PF00005 ABC transporter 18 161 2.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0653 991089112ab17f929084e0c6a5b2509a 317 Gene3D G3DSA:3.40.50.300 1 224 1.1E-63 T 13-10-2018 Thivi_1480 bc1db0bed4513a8e6d138cad6ff3228e 212 Pfam PF08747 Domain of unknown function (DUF1788) 71 207 3.2E-24 T 13-10-2018 IPR014858 Protein of unknown function DUF1788 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 Gene3D G3DSA:3.100.10.20 7 103 2.4E-25 T 13-10-2018 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 Gene3D G3DSA:1.20.120.920 104 296 2.7E-59 T 13-10-2018 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 18 286 17.719 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 11 282 1.7E-91 T 13-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 Pfam PF01867 CRISPR associated protein Cas1 139 252 7.1E-9 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_1073 ff5112c9d4845488bd23d8b8090ba3eb 296 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 140 255 5.5E-21 T 13-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Thivi_1916 e04b7fa763957789d5b847d2cc4cadce 290 Gene3D G3DSA:3.30.1380.10 34 290 2.5E-89 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_1916 e04b7fa763957789d5b847d2cc4cadce 290 Pfam PF03411 Penicillin-insensitive murein endopeptidase 51 288 1.6E-92 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Thivi_1916 e04b7fa763957789d5b847d2cc4cadce 290 PIRSF PIRSF018455 12 290 7.2E-91 T 13-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 Thivi_1916 e04b7fa763957789d5b847d2cc4cadce 290 SUPERFAMILY SSF55166 36 289 1.88E-84 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 Gene3D G3DSA:3.20.20.60 1 294 1.2E-105 T 13-10-2018 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 253 3.2E-49 T 13-10-2018 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 290 1.2E-128 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 SUPERFAMILY SSF51621 6 288 9.87E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 291 50.156 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Thivi_3240 3b2d052f20d7f7868bb1bb362aa109d8 296 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Thivi_2434 038d27046d148570e37d8d65f01209f8 527 Gene3D G3DSA:3.40.710.10 190 515 1.4E-99 T 13-10-2018 Thivi_2434 038d27046d148570e37d8d65f01209f8 527 SUPERFAMILY SSF56519 99 190 1.49E-7 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Thivi_2434 038d27046d148570e37d8d65f01209f8 527 Pfam PF00905 Penicillin binding protein transpeptidase domain 208 516 1.1E-56 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_2434 038d27046d148570e37d8d65f01209f8 527 SUPERFAMILY SSF56601 191 517 4.1E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2434 038d27046d148570e37d8d65f01209f8 527 Gene3D G3DSA:3.90.1310.10 109 433 1.4E-99 T 13-10-2018 Thivi_3500 2f860d387980bcd98e581d60915a7f20 381 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 158 1.8E-22 T 13-10-2018 Thivi_3500 2f860d387980bcd98e581d60915a7f20 381 Gene3D G3DSA:3.30.565.10 36 243 3.4E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3500 2f860d387980bcd98e581d60915a7f20 381 SUPERFAMILY SSF55874 41 149 5.63E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 142 27.639 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 Gene3D G3DSA:3.90.1180.10 2 143 9.9E-61 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 PIRSF PIRSF002181 1 144 6.4E-47 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 Pfam PF00572 Ribosomal protein L13 16 139 6.4E-56 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 1.5E-62 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3599 bd8f0f5cf3be371af229467ddf0a5ca0 145 SUPERFAMILY SSF52161 6 144 7.98E-59 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_3825 692a2d30e6253e2f82a53aae3bc89307 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 90 1.2E-16 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Thivi_3825 692a2d30e6253e2f82a53aae3bc89307 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 4.0E-28 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Thivi_3825 692a2d30e6253e2f82a53aae3bc89307 95 SUPERFAMILY SSF141000 2 93 2.62E-27 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Thivi_3825 692a2d30e6253e2f82a53aae3bc89307 95 Gene3D G3DSA:1.10.20.60 1 93 5.9E-24 T 13-10-2018 Thivi_3825 692a2d30e6253e2f82a53aae3bc89307 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.019 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 61 68 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 167 314 1.4E-26 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 SUPERFAMILY SSF53671 13 318 9.82E-95 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 1.2E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 61 80 1.2E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 278 1.2E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 147 158 1.2E-20 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 Gene3D G3DSA:3.40.50.1370 147 303 1.4E-91 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 146 163 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 51 73 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 89 98 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 232 241 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 278 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 4.2E-31 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 15 159 8.0E-40 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 Gene3D G3DSA:3.40.50.1370 15 314 1.4E-91 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 14 318 41.496 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_3314 22530d9112a61bbd0dd86048f37f3d0c 332 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 15 316 1.6E-93 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0985 39e06f37f1ae58e90690f8065952a46e 177 Pfam PF04390 Lipopolysaccharide-assembly 43 172 5.5E-8 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Thivi_0985 39e06f37f1ae58e90690f8065952a46e 177 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 18 177 25.376 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Thivi_0985 39e06f37f1ae58e90690f8065952a46e 177 Gene3D G3DSA:3.30.160.150 30 176 4.8E-35 T 13-10-2018 Thivi_0655 681d727401969c4662900bb53a78da1c 191 Pfam PF02674 Colicin V production protein 32 170 1.5E-34 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Thivi_0520 c9c5ffeac63c7347e0c6644e88f5d09a 327 Pfam PF00682 HMGL-like 14 259 3.3E-24 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Thivi_0520 c9c5ffeac63c7347e0c6644e88f5d09a 327 SUPERFAMILY SSF51569 7 269 2.2E-40 T 13-10-2018 Thivi_0520 c9c5ffeac63c7347e0c6644e88f5d09a 327 Gene3D G3DSA:3.20.20.70 13 315 1.8E-76 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2581 e173c807cda83a42a907ed89fc7ccb29 147 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 16 145 9.832 T 13-10-2018 IPR022907 VapC family GO:0004540 Thivi_2581 e173c807cda83a42a907ed89fc7ccb29 147 Gene3D G3DSA:3.40.50.1010 16 145 1.7E-10 T 13-10-2018 Thivi_2581 e173c807cda83a42a907ed89fc7ccb29 147 SUPERFAMILY SSF88723 17 142 3.36E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_2581 e173c807cda83a42a907ed89fc7ccb29 147 Pfam PF01850 PIN domain 17 138 5.0E-11 T 13-10-2018 IPR002716 PIN domain Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 SMART SM00382 294 415 2.7E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 SUPERFAMILY SSF160246 8 139 1.78E-16 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 Pfam PF00437 Type II/IV secretion system protein 170 431 3.3E-72 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 SUPERFAMILY SSF52540 159 535 9.47E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 359 373 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 Gene3D G3DSA:3.30.450.90 146 266 2.0E-30 T 13-10-2018 Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 Gene3D G3DSA:3.40.50.300 268 538 5.5E-104 T 13-10-2018 Thivi_0184 ce90635f5de5f2d687d70f0f7be1e158 541 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 139 6.8E-14 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 164 176 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 5.1E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 SUPERFAMILY SSF50022 31 191 5.38E-42 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 Pfam PF00355 Rieske [2Fe-2S] domain 109 177 1.5E-10 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 Gene3D G3DSA:1.20.5.510 1 40 2.0E-6 T 13-10-2018 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 Gene3D G3DSA:2.102.10.10 43 192 6.8E-47 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 1.5E-16 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Thivi_3744 a743ad6be5f805cdf2f40ab750992606 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 192 5.6E-73 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Thivi_3066 4fa80bb4b2a8f17e3aecc4a32a171acc 179 Pfam PF08534 Redoxin 38 166 2.6E-18 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Thivi_3066 4fa80bb4b2a8f17e3aecc4a32a171acc 179 SUPERFAMILY SSF52833 43 175 2.0E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3066 4fa80bb4b2a8f17e3aecc4a32a171acc 179 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_3066 4fa80bb4b2a8f17e3aecc4a32a171acc 179 Gene3D G3DSA:3.40.30.10 26 179 1.3E-40 T 13-10-2018 Thivi_3066 4fa80bb4b2a8f17e3aecc4a32a171acc 179 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 9 174 5.9E-55 T 13-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 Thivi_4628 ef737eee0c58c79fdb3cff21cae78e79 374 Gene3D G3DSA:3.90.1150.10 12 363 2.4E-99 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_4628 ef737eee0c58c79fdb3cff21cae78e79 374 SUPERFAMILY SSF53383 2 372 1.99E-81 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_4628 ef737eee0c58c79fdb3cff21cae78e79 374 Pfam PF00266 Aminotransferase class-V 54 338 9.2E-46 T 13-10-2018 IPR000192 Aminotransferase class V domain Thivi_4628 ef737eee0c58c79fdb3cff21cae78e79 374 Gene3D G3DSA:3.40.640.10 23 280 2.4E-99 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_0377 763b13e1264947fee7416a6cfd5d6a19 179 SUPERFAMILY SSF75708 40 175 1.7E-35 T 13-10-2018 Thivi_0377 763b13e1264947fee7416a6cfd5d6a19 179 Pfam PF04344 Chemotaxis phosphatase, CheZ 44 175 1.0E-44 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Thivi_0377 763b13e1264947fee7416a6cfd5d6a19 179 Gene3D G3DSA:1.10.287.500 63 178 7.3E-31 T 13-10-2018 Thivi_0377 763b13e1264947fee7416a6cfd5d6a19 179 PIRSF PIRSF002884 21 177 1.8E-45 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Thivi_0450 839ff5e49f9237984e2fc6e68e18b056 564 Pfam PF05992 SbmA/BacA-like family 1 290 3.4E-127 T 13-10-2018 IPR009248 SbmA/BacA-like GO:0015833|GO:0016021|GO:1904680 Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 SUPERFAMILY SSF50249 14 82 1.32E-9 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 Gene3D G3DSA:1.20.1440.120 88 247 1.5E-46 T 13-10-2018 Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 Pfam PF11967 Recombination protein O N terminal 15 82 1.4E-13 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 Pfam PF02565 Recombination protein O C terminal 91 235 4.7E-21 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 Gene3D G3DSA:2.40.50.140 11 85 1.2E-23 T 13-10-2018 Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 SUPERFAMILY SSF57863 98 210 3.4E-10 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 Hamap MF_00201 DNA repair protein RecO [recO]. 10 240 21.001 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Thivi_0611 9e74443df960d7f2abd76d2f2d7f0169 252 TIGRFAM TIGR00613 reco: DNA repair protein RecO 15 238 1.4E-24 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Thivi_1581 885d73675aacca7d072a7932782d311a 204 Gene3D G3DSA:1.10.10.10 33 202 3.5E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1581 885d73675aacca7d072a7932782d311a 204 SUPERFAMILY SSF46894 159 200 4.76E-5 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 13-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 SUPERFAMILY SSF52091 434 532 3.34E-16 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 Pfam PF00916 Sulfate permease family 13 378 8.3E-91 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 Gene3D G3DSA:3.30.750.24 424 547 3.6E-22 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 Pfam PF01740 STAS domain 434 530 4.8E-13 T 13-10-2018 IPR002645 STAS domain Thivi_3671 da2d1110a39436bf96a9a1376f834251 568 TIGRFAM TIGR00815 sulP: sulfate permease 3 534 8.3E-120 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 Gene3D G3DSA:3.50.50.60 3 405 2.8E-76 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 7 306 2.4E-73 T 13-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.4E-12 T 13-10-2018 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 1.4E-12 T 13-10-2018 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.4E-12 T 13-10-2018 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 SUPERFAMILY SSF51905 5 393 1.47E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 TIGRFAM TIGR02023 BchP-ChlP: geranylgeranyl reductase 8 395 3.1E-153 T 13-10-2018 IPR010253 Geranylgeranyl reductase, plant/prokaryotic GO:0015979|GO:0015995|GO:0045550|GO:0055114 KEGG: 00900+1.3.1.83 Thivi_2414 6cebdbc4b709e21bbd165ea7c1adef99 413 Pfam PF01494 FAD binding domain 8 165 3.2E-8 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 Thivi_1867 c6215efc182b7623c22f0a017866086e 591 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 520 6.0E-130 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_1867 c6215efc182b7623c22f0a017866086e 591 Pfam PF13537 Glutamine amidotransferase domain 47 167 1.9E-44 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Thivi_1867 c6215efc182b7623c22f0a017866086e 591 SUPERFAMILY SSF52402 232 565 3.03E-72 T 13-10-2018 Thivi_1867 c6215efc182b7623c22f0a017866086e 591 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 589 6.6E-293 T 13-10-2018 IPR017535 Asparagine synthase family amidotransferase Thivi_1867 c6215efc182b7623c22f0a017866086e 591 PIRSF PIRSF001589 1 591 4.1E-197 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Thivi_1867 c6215efc182b7623c22f0a017866086e 591 Pfam PF00733 Asparagine synthase 243 587 9.3E-84 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Thivi_1867 c6215efc182b7623c22f0a017866086e 591 SUPERFAMILY SSF56235 1 224 1.37E-63 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1867 c6215efc182b7623c22f0a017866086e 591 Gene3D G3DSA:3.60.20.10 4 184 2.5E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_3078 ec4d2a34b4a48d9fccffd60b0a73a4f5 274 Pfam PF08543 Phosphomethylpyrimidine kinase 17 251 2.7E-66 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Thivi_3078 ec4d2a34b4a48d9fccffd60b0a73a4f5 274 Gene3D G3DSA:3.40.1190.20 1 241 1.9E-73 T 13-10-2018 IPR029056 Ribokinase-like Thivi_3078 ec4d2a34b4a48d9fccffd60b0a73a4f5 274 SUPERFAMILY SSF53613 6 260 2.34E-63 T 13-10-2018 IPR029056 Ribokinase-like Thivi_1914 57df503d19b38893598272faf711f6ef 397 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 6.3E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 6.3E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 161 189 6.3E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 6.3E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 13 247 16.504 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 233 1.1E-72 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 Gene3D G3DSA:1.20.58.2200 342 394 1.7E-5 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily Thivi_1914 57df503d19b38893598272faf711f6ef 397 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 228 2.4E-65 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Thivi_1914 57df503d19b38893598272faf711f6ef 397 ProSitePatterns PS01218 TatC family signature. 161 180 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 SUPERFAMILY SSF81483 3 312 4.19E-133 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 ProSitePatterns PS00244 Photosynthetic reaction center proteins signature. 195 221 - T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 Gene3D G3DSA:1.20.85.10 144 307 5.0E-81 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 Gene3D G3DSA:1.20.85.10 2 143 7.6E-67 T 13-10-2018 IPR036854 Photosystem II protein D1/D2 superfamily GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 261 286 1.1E-51 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 201 227 1.1E-51 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 55 76 1.1E-51 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 112 140 1.1E-51 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 PRINTS PR00256 Bacterial photosynthetic reaction centre signature 145 167 1.1E-51 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 Pfam PF00124 Photosynthetic reaction centre protein 51 303 2.4E-105 T 13-10-2018 IPR000484 Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0045156 MetaCyc: PWY-101 Thivi_1999 5917faaac1fd3bb4dfae4973ac9d5383 324 TIGRFAM TIGR01115 pufM: photosynthetic reaction center M subunit 1 305 1.3E-168 T 13-10-2018 IPR005781 Photosynthetic reaction centre, M subunit GO:0019684|GO:0030077|GO:0045156 Thivi_0939 c56ed8ab1931184be433b7faa952cac2 212 Pfam PF01728 FtsJ-like methyltransferase 29 205 8.3E-56 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Thivi_0939 c56ed8ab1931184be433b7faa952cac2 212 PIRSF PIRSF005461 1 211 5.4E-77 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Thivi_0939 c56ed8ab1931184be433b7faa952cac2 212 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 13 206 31.057 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Thivi_0939 c56ed8ab1931184be433b7faa952cac2 212 Gene3D G3DSA:3.40.50.150 28 210 1.5E-59 T 13-10-2018 Thivi_0939 c56ed8ab1931184be433b7faa952cac2 212 SUPERFAMILY SSF53335 28 205 4.1E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3603 ee22f8dfbc3c344566227a0da99c8db9 279 Pfam PF00665 Integrase core domain 109 222 2.4E-24 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_3603 ee22f8dfbc3c344566227a0da99c8db9 279 Pfam PF13276 HTH-like domain 32 84 2.0E-11 T 13-10-2018 IPR025948 HTH-like domain Thivi_3603 ee22f8dfbc3c344566227a0da99c8db9 279 Gene3D G3DSA:3.30.420.10 106 265 3.4E-8 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_3603 ee22f8dfbc3c344566227a0da99c8db9 279 SUPERFAMILY SSF53098 101 264 5.31E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4279 2f8c2381a68216125dc7471c1532b10c 462 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 22 461 1.5E-159 T 13-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated Thivi_4279 2f8c2381a68216125dc7471c1532b10c 462 Pfam PF02397 Bacterial sugar transferase 271 456 4.3E-66 T 13-10-2018 IPR003362 Bacterial sugar transferase Thivi_4279 2f8c2381a68216125dc7471c1532b10c 462 Pfam PF13727 CoA-binding domain 69 209 5.5E-6 T 13-10-2018 Thivi_4279 2f8c2381a68216125dc7471c1532b10c 462 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 23 461 1.2E-119 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Thivi_4350 667f35ea1683793f9c0e90acb735d6c1 116 Gene3D G3DSA:1.20.1300.10 1 109 1.8E-22 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4350 667f35ea1683793f9c0e90acb735d6c1 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 98 1.4E-8 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4350 667f35ea1683793f9c0e90acb735d6c1 116 SUPERFAMILY SSF81343 3 107 1.09E-19 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_4350 667f35ea1683793f9c0e90acb735d6c1 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 6 107 1.0E-22 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Thivi_4388 a3ed1e144171c3e9d410ed0d133ec078 111 SUPERFAMILY SSF47413 8 75 2.62E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_4388 a3ed1e144171c3e9d410ed0d133ec078 111 Gene3D G3DSA:1.10.260.40 7 76 1.5E-18 T 13-10-2018 Thivi_4388 a3ed1e144171c3e9d410ed0d133ec078 111 Pfam PF13693 Winged helix-turn-helix DNA-binding 14 83 2.4E-24 T 13-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF52540 9 228 6.18E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF50447 207 303 1.96E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.6E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.0E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF50465 300 395 8.92E-37 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 8.2E-226 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.935 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:2.40.30.10 340 395 3.8E-29 T 13-10-2018 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:2.40.30.10 208 336 1.4E-52 T 13-10-2018 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:3.40.50.300 1 205 2.7E-72 T 13-10-2018 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.8E-59 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4186 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF52540 9 228 6.18E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF50447 207 303 1.96E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.6E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.0E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 SUPERFAMILY SSF50465 300 395 8.92E-37 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 8.2E-226 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.935 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:2.40.30.10 340 395 3.8E-29 T 13-10-2018 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:2.40.30.10 208 336 1.4E-52 T 13-10-2018 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Gene3D G3DSA:3.40.50.300 1 205 2.7E-72 T 13-10-2018 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.1E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.8E-59 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_4199 bfe6a5b7b1395ba5e2f0f3fee2a7ce0d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.6E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Thivi_3476 129c4e88a84a997886a4f6bec3b25697 346 Pfam PF00248 Aldo/keto reductase family 16 337 4.4E-69 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain Thivi_3476 129c4e88a84a997886a4f6bec3b25697 346 SUPERFAMILY SSF51430 1 344 1.06E-108 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Thivi_3476 129c4e88a84a997886a4f6bec3b25697 346 Gene3D G3DSA:3.20.20.100 1 346 8.7E-131 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 SUPERFAMILY SSF53244 582 709 6.26E-28 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 Gene3D G3DSA:3.40.1190.10 329 574 1.4E-34 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 Pfam PF08245 Mur ligase middle domain 345 556 3.9E-19 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 Gene3D G3DSA:3.90.190.20 583 722 1.4E-18 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 Pfam PF02875 Mur ligase family, glutamate ligase domain 582 666 9.1E-10 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Thivi_0045 70eb170b1f46cb1bd32f593c5863013b 755 SUPERFAMILY SSF53623 333 595 4.01E-36 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_2145 543fa3cb5b4ee2b5627eda5e8c1524f1 124 SUPERFAMILY SSF47413 9 79 2.25E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_2145 543fa3cb5b4ee2b5627eda5e8c1524f1 124 Gene3D G3DSA:1.10.260.40 2 79 7.3E-15 T 13-10-2018 Thivi_2145 543fa3cb5b4ee2b5627eda5e8c1524f1 124 SMART SM00530 15 73 1.7E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_2145 543fa3cb5b4ee2b5627eda5e8c1524f1 124 Pfam PF13560 Helix-turn-helix domain 11 70 4.4E-9 T 13-10-2018 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 Pfam PF00303 Thymidylate synthase 3 279 1.2E-110 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 SUPERFAMILY SSF55831 1 279 3.14E-114 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 86 2.9E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 279 1.0E-81 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.4E-39 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 PRINTS PR00108 Thymidylate synthase family signature 154 169 4.4E-39 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 PRINTS PR00108 Thymidylate synthase family signature 172 198 4.4E-39 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 PRINTS PR00108 Thymidylate synthase family signature 210 227 4.4E-39 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 Gene3D G3DSA:3.30.572.10 1 279 5.4E-118 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_4329 8335a9975b26229f88ed99bb5c3bbf9c 279 Hamap MF_00008 Thymidylate synthase [thyA]. 1 279 37.943 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.744 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 Gene3D G3DSA:1.10.720.90 2 55 2.0E-26 T 13-10-2018 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 Gene3D G3DSA:1.10.1900.20 56 118 2.8E-27 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.7E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-40 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 6.0E-20 T 13-10-2018 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 SUPERFAMILY SSF74731 2 117 1.18E-49 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1562 26fe416ade8aa46b5a7f3358c45e1fce 118 Pfam PF00453 Ribosomal protein L20 3 109 7.1E-49 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_3257 30063a0dfeb597522a0db0772efa9505 292 Gene3D G3DSA:3.30.1330.80 100 222 1.4E-82 T 13-10-2018 Thivi_3257 30063a0dfeb597522a0db0772efa9505 292 SUPERFAMILY SSF117856 24 242 5.23E-75 T 13-10-2018 Thivi_3257 30063a0dfeb597522a0db0772efa9505 292 Gene3D G3DSA:3.30.1330.80 25 241 1.4E-82 T 13-10-2018 Thivi_3257 30063a0dfeb597522a0db0772efa9505 292 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 24 242 6.2E-73 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Thivi_3257 30063a0dfeb597522a0db0772efa9505 292 Pfam PF03306 Alpha-acetolactate decarboxylase 25 242 5.9E-81 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Thivi_4574 3683f665dbc1586de0b5b1f745ac07ba 107 SUPERFAMILY SSF54736 22 106 2.51E-32 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4574 3683f665dbc1586de0b5b1f745ac07ba 107 Gene3D G3DSA:3.30.1390.10 7 107 1.8E-42 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thivi_4574 3683f665dbc1586de0b5b1f745ac07ba 107 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 5 102 28.941 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Thivi_4574 3683f665dbc1586de0b5b1f745ac07ba 107 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 5.6E-33 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 188 1.1E-39 T 13-10-2018 Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 Gene3D G3DSA:3.40.50.1000 4 214 1.3E-75 T 13-10-2018 IPR023214 HAD superfamily Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 SUPERFAMILY SSF56784 5 213 1.28E-35 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 Gene3D G3DSA:1.20.1440.100 15 88 1.3E-75 T 13-10-2018 Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 201 9.2E-46 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Thivi_3620 b48eb17b2802e8e27b6d8b4d1f0246b9 218 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 5.5E-25 T 13-10-2018 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 Gene3D G3DSA:3.50.50.90 14 648 3.3E-273 T 13-10-2018 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 SUPERFAMILY SSF46977 519 652 1.44E-38 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 Pfam PF00890 FAD binding domain 16 264 1.0E-6 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 16 652 1.2E-276 T 13-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 Gene3D G3DSA:3.90.700.10 281 411 3.3E-273 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 SUPERFAMILY SSF56425 256 401 1.57E-66 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 SUPERFAMILY SSF51905 10 497 2.56E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3299 d2ca5099b98527d22c8d783356aa75b1 659 PIRSF PIRSF000171 5 657 1.4E-251 T 13-10-2018 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 Pfam PF08345 Flagellar M-ring protein C-terminal 254 424 4.2E-51 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 Gene3D G3DSA:3.30.300.30 121 222 9.7E-12 T 13-10-2018 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PIRSF PIRSF004862 1 559 2.6E-150 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 Pfam PF01514 Secretory protein of YscJ/FliF family 32 221 5.1E-63 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 10 557 1.4E-101 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PRINTS PR01009 Flagellar M-ring protein signature 348 372 3.9E-36 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PRINTS PR01009 Flagellar M-ring protein signature 154 168 3.9E-36 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PRINTS PR01009 Flagellar M-ring protein signature 122 140 3.9E-36 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PRINTS PR01009 Flagellar M-ring protein signature 197 215 3.9E-36 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0358 b13d97c9a9bab71822afd843b7bdc4a7 559 PRINTS PR01009 Flagellar M-ring protein signature 267 285 3.9E-36 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Thivi_0896 0afc095fb5763fdbceaf349680bebacf 175 Pfam PF05951 Bacterial protein of unknown function (DUF882) 24 173 1.6E-54 T 13-10-2018 IPR010275 Protein of unknown function DUF882 Thivi_0896 0afc095fb5763fdbceaf349680bebacf 175 SUPERFAMILY SSF55166 56 174 1.57E-32 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_0896 0afc095fb5763fdbceaf349680bebacf 175 Gene3D G3DSA:3.30.1380.10 59 175 5.6E-10 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_3889 c677178ff4e69143d86e1b5c8bb12001 246 Pfam PF11185 Protein of unknown function (DUF2971) 81 165 3.3E-5 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 Pfam PF12697 Alpha/beta hydrolase family 62 309 2.6E-24 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 1.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 1.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 1.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 260 274 1.7E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 Gene3D G3DSA:3.40.50.1820 22 317 1.3E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 SUPERFAMILY SSF53474 37 315 3.85E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00412 Epoxide hydrolase signature 149 162 5.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00412 Epoxide hydrolase signature 258 274 5.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00412 Epoxide hydrolase signature 291 313 5.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Thivi_0436 12da84dbf9efaae065dc640cd6309e96 323 PRINTS PR00412 Epoxide hydrolase signature 66 84 5.6E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Thivi_2096 1858661a742e972e6c73b91f360069b8 261 Pfam PF14252 Domain of unknown function (DUF4347) 36 185 1.5E-52 T 13-10-2018 IPR025592 Domain of unknown function DUF4347 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 Pfam PF01750 Hydrogenase maturation protease 24 151 8.1E-40 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 8 153 7.5E-43 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 SUPERFAMILY SSF53163 6 156 3.14E-43 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 Gene3D G3DSA:3.40.50.1450 6 164 3.3E-37 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 7 156 4.2E-62 T 13-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 PRINTS PR00446 Hydrogen uptake protein signature 19 30 6.9E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 PRINTS PR00446 Hydrogen uptake protein signature 7 19 6.9E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 PRINTS PR00446 Hydrogen uptake protein signature 71 87 6.9E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 PRINTS PR00446 Hydrogen uptake protein signature 60 70 6.9E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_3757 d213f9edd56ff48c53ff82f183c45948 210 PRINTS PR00446 Hydrogen uptake protein signature 39 56 6.9E-36 T 13-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Thivi_1488 b78e653990299b53d2f8e8a78db4eb1b 361 SUPERFAMILY SSF52980 1 194 1.88E-33 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_1488 b78e653990299b53d2f8e8a78db4eb1b 361 Pfam PF09588 YqaJ-like viral recombinase domain 12 148 9.3E-19 T 13-10-2018 IPR019080 YqaJ viral recombinase Thivi_1488 b78e653990299b53d2f8e8a78db4eb1b 361 Gene3D G3DSA:3.90.320.10 6 204 8.7E-31 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Thivi_1488 b78e653990299b53d2f8e8a78db4eb1b 361 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 6 155 1.4E-35 T 13-10-2018 IPR017482 Putative phage-type endonuclease Thivi_4533 536874f6fe450312cbb30a4c43101999 325 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 321 2.1E-31 T 13-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 Thivi_1973 88cecc98ee4f87139376c85bc1f742be 584 Gene3D G3DSA:3.30.750.24 448 560 1.1E-19 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_1973 88cecc98ee4f87139376c85bc1f742be 584 Pfam PF00916 Sulfate permease family 27 399 1.6E-94 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Thivi_1973 88cecc98ee4f87139376c85bc1f742be 584 TIGRFAM TIGR00815 sulP: sulfate permease 14 554 6.5E-117 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Thivi_1973 88cecc98ee4f87139376c85bc1f742be 584 SUPERFAMILY SSF52091 449 553 3.34E-13 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_1973 88cecc98ee4f87139376c85bc1f742be 584 Pfam PF01740 STAS domain 451 553 3.6E-8 T 13-10-2018 IPR002645 STAS domain Thivi_1572 96c8035b864f80c8bab65b27bb319750 268 Gene3D G3DSA:3.40.50.300 21 188 2.9E-30 T 13-10-2018 Thivi_1572 96c8035b864f80c8bab65b27bb319750 268 SUPERFAMILY SSF52540 27 245 6.97E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1572 96c8035b864f80c8bab65b27bb319750 268 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 183 266 5.7E-33 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_1572 96c8035b864f80c8bab65b27bb319750 268 Pfam PF07728 AAA domain (dynein-related subfamily) 36 170 1.8E-30 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_3468 6524ac2cc2beb1e94cced2caab36ef3b 242 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 9 221 9.6E-48 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Thivi_3468 6524ac2cc2beb1e94cced2caab36ef3b 242 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 25 220 3.7E-36 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Pfam PF07885 Ion channel 19 100 7.8E-7 T 13-10-2018 IPR013099 Potassium channel domain Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 SUPERFAMILY SSF81324 6 146 4.32E-14 T 13-10-2018 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Gene3D G3DSA:3.40.50.720 286 416 1.2E-25 T 13-10-2018 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Gene3D G3DSA:1.10.287.70 9 113 3.3E-7 T 13-10-2018 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 SUPERFAMILY SSF51735 126 269 4.19E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 SUPERFAMILY SSF51735 288 427 8.67E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Pfam PF02254 TrkA-N domain 292 403 3.0E-20 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Pfam PF02254 TrkA-N domain 126 245 4.9E-22 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Thivi_1627 0d35e1b5cf4aa5971166817cb95f088e 568 Gene3D G3DSA:3.40.50.720 122 263 4.3E-28 T 13-10-2018 Thivi_4237 b1925eeaab60f2e83cd06e58f88e8fb4 270 Gene3D G3DSA:3.40.50.300 19 187 3.9E-28 T 13-10-2018 Thivi_4237 b1925eeaab60f2e83cd06e58f88e8fb4 270 Pfam PF07728 AAA domain (dynein-related subfamily) 35 169 6.7E-30 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_4237 b1925eeaab60f2e83cd06e58f88e8fb4 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 266 1.0E-31 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_4237 b1925eeaab60f2e83cd06e58f88e8fb4 270 SUPERFAMILY SSF52540 26 228 2.3E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 Pfam PF13488 Glycine zipper 38 82 7.4E-11 T 13-10-2018 IPR039567 Glycine zipper domain Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 Gene3D G3DSA:3.30.1330.60 77 224 6.9E-39 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 Pfam PF00691 OmpA family 119 213 4.7E-20 T 13-10-2018 IPR006665 OmpA-like domain Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 PRINTS PR01021 OMPA domain signature 164 180 6.8E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 PRINTS PR01021 OMPA domain signature 149 164 6.8E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 PRINTS PR01021 OMPA domain signature 119 141 6.8E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_0255 e3c629d70f650f76a7251cdf8e24c888 225 SUPERFAMILY SSF103088 107 222 1.2E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 Pfam PF00582 Universal stress protein family 375 511 3.8E-27 T 13-10-2018 IPR006016 UspA Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 Pfam PF00582 Universal stress protein family 519 644 2.1E-24 T 13-10-2018 IPR006016 UspA Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 Pfam PF01925 Sulfite exporter TauE/SafE 17 288 2.9E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 SUPERFAMILY SSF52402 519 644 9.21E-29 T 13-10-2018 Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 Gene3D G3DSA:3.40.50.620 374 513 1.4E-34 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 Gene3D G3DSA:3.40.50.620 517 645 1.7E-29 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 SUPERFAMILY SSF52402 375 512 3.52E-35 T 13-10-2018 Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 PRINTS PR01438 Universal stress protein signature 604 616 1.5E-15 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 PRINTS PR01438 Universal stress protein signature 622 644 1.5E-15 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0061 a6694c25409a3f383b76f0d8d0194497 646 PRINTS PR01438 Universal stress protein signature 375 393 1.5E-15 T 13-10-2018 IPR006015 Universal stress protein A Thivi_0727 ce9ab6adea809de56241f9808b0e200c 80 SUPERFAMILY SSF57716 38 71 5.27E-6 T 13-10-2018 Thivi_0727 ce9ab6adea809de56241f9808b0e200c 80 Gene3D G3DSA:1.20.120.910 3 73 3.6E-15 T 13-10-2018 Thivi_0727 ce9ab6adea809de56241f9808b0e200c 80 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 32 69 6.2E-11 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Thivi_3989 c5118140d24452a456142a05cb5582fc 201 Pfam PF01813 ATP synthase subunit D 10 192 3.2E-36 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_3989 c5118140d24452a456142a05cb5582fc 201 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 1 195 2.7E-26 T 13-10-2018 IPR002699 ATPase, V1 complex, subunit D GO:0042626 Reactome: R-HSA-1222556|Reactome: R-HSA-6798695|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 Gene3D G3DSA:1.10.10.10 128 227 1.3E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 SUPERFAMILY SSF46894 129 224 6.52E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 Gene3D G3DSA:3.40.50.2300 1 127 1.0E-40 T 13-10-2018 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 8.0E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 225 8.3E-106 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 SMART SM00448 2 115 1.0E-46 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 SMART SM00862 149 224 2.0E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 Pfam PF00072 Response regulator receiver domain 4 116 5.4E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0294 5b99e137c5efc6b7b2233e3f63477513 228 SUPERFAMILY SSF52172 1 124 1.42E-43 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2037 713ed8f7c0594c3647e3dd9d3c74917b 332 SMART SM00332 2 254 4.3E-7 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2037 713ed8f7c0594c3647e3dd9d3c74917b 332 SUPERFAMILY SSF81606 7 254 4.19E-44 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2037 713ed8f7c0594c3647e3dd9d3c74917b 332 Gene3D G3DSA:3.60.40.10 7 259 1.1E-45 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2037 713ed8f7c0594c3647e3dd9d3c74917b 332 SMART SM00331 21 256 3.9E-19 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2037 713ed8f7c0594c3647e3dd9d3c74917b 332 Pfam PF13672 Protein phosphatase 2C 21 224 1.6E-15 T 13-10-2018 Thivi_3699 cb51b49b1a324b3b351e704460b83294 167 Gene3D G3DSA:1.20.120.20 21 148 4.6E-6 T 13-10-2018 Thivi_3699 cb51b49b1a324b3b351e704460b83294 167 SUPERFAMILY SSF58113 53 145 3.92E-6 T 13-10-2018 Thivi_3699 cb51b49b1a324b3b351e704460b83294 167 Pfam PF07798 Protein of unknown function (DUF1640) 54 167 4.5E-9 T 13-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 21 623 8.0E-263 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 ProSitePatterns PS00802 Transketolase signature 2. 433 449 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 18 628 45.309 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Gene3D G3DSA:3.40.50.920 503 627 2.3E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Pfam PF02780 Transketolase, C-terminal domain 503 619 7.4E-27 T 13-10-2018 IPR033248 Transketolase, C-terminal domain Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 ProSitePatterns PS00801 Transketolase signature 1. 44 63 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 SUPERFAMILY SSF52518 324 512 4.24E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 19 290 1.1E-119 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Pfam PF02779 Transketolase, pyrimidine binding domain 327 486 4.6E-37 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 Gene3D G3DSA:3.40.50.970 324 495 7.0E-67 T 13-10-2018 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 SUPERFAMILY SSF52518 14 389 5.36E-82 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 SUPERFAMILY SSF52922 499 623 4.58E-32 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Thivi_1568 f06f044cb37476b19e32274bc0695e2a 650 SMART SM00861 327 491 3.6E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 Gene3D G3DSA:3.40.50.720 4 259 1.8E-54 T 13-10-2018 Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 PIRSF PIRSF000094 6 259 1.5E-84 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 SUPERFAMILY SSF51735 10 257 1.06E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 256 2.5E-76 T 13-10-2018 Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0978 a798e8a860c27820a593b79e90fd6bd9 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.6E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0066 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0066 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0066 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2963 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF01609 Transposase DDE domain 203 367 3.6E-10 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_2963 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_2963 27c3b593f6c07c56aa9f18a9df4eaada 381 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2778 e7278d64a2d12685337a3e77f505edf1 210 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 95 196 6.5E-10 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2778 e7278d64a2d12685337a3e77f505edf1 210 SUPERFAMILY SSF81343 8 210 1.63E-42 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2778 e7278d64a2d12685337a3e77f505edf1 210 Gene3D G3DSA:1.20.1300.10 3 210 4.8E-34 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_1771 16910f4430c6f4eb28fe2b9ed84fa163 412 Gene3D G3DSA:3.40.50.12780 88 314 1.8E-13 T 13-10-2018 Thivi_1771 16910f4430c6f4eb28fe2b9ed84fa163 412 SUPERFAMILY SSF56801 98 408 2.62E-36 T 13-10-2018 Thivi_1771 16910f4430c6f4eb28fe2b9ed84fa163 412 Gene3D G3DSA:3.30.300.30 316 410 4.2E-15 T 13-10-2018 Thivi_1771 16910f4430c6f4eb28fe2b9ed84fa163 412 Pfam PF13193 AMP-binding enzyme C-terminal domain 333 407 6.3E-8 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Thivi_1771 16910f4430c6f4eb28fe2b9ed84fa163 412 Pfam PF00501 AMP-binding enzyme 108 260 2.9E-9 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_2702 78d0cacc59ce448ba4f50a2d101618cf 510 Pfam PF01098 Cell cycle protein 96 434 1.8E-69 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_4537 523613d210636833252094f28ae0cb5b 92 Gene3D G3DSA:1.10.260.40 2 91 5.5E-21 T 13-10-2018 Thivi_4537 523613d210636833252094f28ae0cb5b 92 SUPERFAMILY SSF47413 37 78 1.74E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_4537 523613d210636833252094f28ae0cb5b 92 Pfam PF13560 Helix-turn-helix domain 37 74 1.8E-9 T 13-10-2018 Thivi_3787 13393d0984c08eb23d4b1b6d4e9e7928 200 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 174 198 0.0029 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_1603 b0241d250203c903d35284e8efc960d3 250 Pfam PF05023 Phytochelatin synthase 81 239 1.2E-26 T 13-10-2018 IPR007719 Phytochelatin synthase, N-terminal catalytic domain GO:0010038|GO:0016756|GO:0046872|GO:0046938 MetaCyc: PWY-6745 Thivi_1603 b0241d250203c903d35284e8efc960d3 250 Gene3D G3DSA:3.90.70.30 70 245 3.6E-28 T 13-10-2018 IPR038156 Phytochelatin synthase, N-terminal domain superfamily MetaCyc: PWY-6745 Thivi_1603 b0241d250203c903d35284e8efc960d3 250 SUPERFAMILY SSF54001 70 240 5.59E-33 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_3291 278303e5d64b2197c8de3e08fd184115 210 Pfam PF01553 Acyltransferase 37 155 8.2E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_3291 278303e5d64b2197c8de3e08fd184115 210 SUPERFAMILY SSF69593 37 183 3.66E-25 T 13-10-2018 Thivi_3291 278303e5d64b2197c8de3e08fd184115 210 SMART SM00563 39 160 4.7E-13 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_3174 cfe1e123cd314d985fcaac8d9ef05951 313 SUPERFAMILY SSF161098 24 305 5.36E-55 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3174 cfe1e123cd314d985fcaac8d9ef05951 313 Gene3D G3DSA:1.10.3720.10 24 311 1.0E-55 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3174 cfe1e123cd314d985fcaac8d9ef05951 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 309 5.1E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_2469 435d21adff92f98699866e7192a9858f 120 SUPERFAMILY SSF143100 16 58 6.41E-5 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_1378 e3eac5e105f9614cf31d077ef6d8a0fe 606 Pfam PF00361 Proton-conducting membrane transporter 149 437 1.1E-47 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1378 e3eac5e105f9614cf31d077ef6d8a0fe 606 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 259 2.5E-10 T 13-10-2018 Thivi_1378 e3eac5e105f9614cf31d077ef6d8a0fe 606 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 2.5E-10 T 13-10-2018 Thivi_1378 e3eac5e105f9614cf31d077ef6d8a0fe 606 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 331 343 2.5E-10 T 13-10-2018 Thivi_1378 e3eac5e105f9614cf31d077ef6d8a0fe 606 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 260 286 2.5E-10 T 13-10-2018 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1202 1285 9.2E-6 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Gene3D G3DSA:3.40.50.300 498 922 1.8E-147 T 13-10-2018 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 486 4.7E-55 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Gene3D G3DSA:1.10.486.10 644 786 1.8E-147 T 13-10-2018 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 SUPERFAMILY SSF52540 11 898 1.9E-107 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Gene3D G3DSA:1.10.3170.10 162 391 7.2E-130 T 13-10-2018 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 SUPERFAMILY SSF52980 978 1313 4.02E-67 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 3 1312 21.424 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1311 0.0 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Pfam PF13361 UvrD-like helicase C-terminal domain 747 894 7.4E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Thivi_2028 499395bfd64e3e315c9c96a08d2ec21f 1327 Gene3D G3DSA:3.40.50.300 5 487 7.2E-130 T 13-10-2018 Thivi_3843 64a0f51008d188ea001d1c10f780726f 167 Gene3D G3DSA:2.60.40.790 11 167 2.5E-33 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_3843 64a0f51008d188ea001d1c10f780726f 167 SUPERFAMILY SSF49764 42 166 9.27E-35 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_3843 64a0f51008d188ea001d1c10f780726f 167 Pfam PF00011 Hsp20/alpha crystallin family 66 167 3.9E-22 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Thivi_2417 770157dfd9bb941da2955608fbdd4af6 133 Gene3D G3DSA:2.60.120.10 11 124 3.1E-17 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_2417 770157dfd9bb941da2955608fbdd4af6 133 SUPERFAMILY SSF51182 20 115 1.15E-19 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_2417 770157dfd9bb941da2955608fbdd4af6 133 Pfam PF07883 Cupin domain 45 111 1.5E-9 T 13-10-2018 IPR013096 Cupin 2, conserved barrel Thivi_1865 9f436a4301c018178a1462397145bded 238 Gene3D G3DSA:3.30.420.10 23 222 7.4E-50 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_1865 9f436a4301c018178a1462397145bded 238 SMART SM00479 32 217 1.5E-29 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_1865 9f436a4301c018178a1462397145bded 238 TIGRFAM TIGR01298 RNaseT: ribonuclease T 25 218 4.3E-91 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Thivi_1865 9f436a4301c018178a1462397145bded 238 Hamap MF_00157 Ribonuclease T [rnt]. 1 238 88.396 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Thivi_1865 9f436a4301c018178a1462397145bded 238 Pfam PF00929 Exonuclease 34 208 1.3E-28 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_1865 9f436a4301c018178a1462397145bded 238 SUPERFAMILY SSF53098 25 218 2.68E-51 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3204 8fadd895b3ddb8430064e944041773d7 187 Pfam PF01300 Telomere recombination 15 184 2.3E-40 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Thivi_3204 8fadd895b3ddb8430064e944041773d7 187 Gene3D G3DSA:3.90.870.10 2 186 2.2E-56 T 13-10-2018 Thivi_3204 8fadd895b3ddb8430064e944041773d7 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 6 186 37.802 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Thivi_3204 8fadd895b3ddb8430064e944041773d7 187 SUPERFAMILY SSF55821 7 184 1.8E-51 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_1194 f080395b690c8f4761b154dd54d37f1b 106 Pfam PF12844 Helix-turn-helix domain 6 67 7.8E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1194 f080395b690c8f4761b154dd54d37f1b 106 SMART SM00530 8 63 6.0E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1194 f080395b690c8f4761b154dd54d37f1b 106 Gene3D G3DSA:1.10.260.40 1 90 2.6E-18 T 13-10-2018 Thivi_1194 f080395b690c8f4761b154dd54d37f1b 106 SUPERFAMILY SSF47413 3 69 1.96E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1151 66c512316af8c5b9647403c92fcc95fd 207 SUPERFAMILY SSF55821 1 204 1.13E-63 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Thivi_1151 66c512316af8c5b9647403c92fcc95fd 207 Pfam PF01300 Telomere recombination 22 198 1.2E-44 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Thivi_1151 66c512316af8c5b9647403c92fcc95fd 207 Gene3D G3DSA:3.90.870.10 1 205 3.6E-64 T 13-10-2018 Thivi_1151 66c512316af8c5b9647403c92fcc95fd 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 5.6E-64 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 Thivi_0699 6c68f763d162483037d6a05ae0c0f3e3 217 Gene3D G3DSA:1.20.950.20 2 184 4.9E-18 T 13-10-2018 Thivi_0699 6c68f763d162483037d6a05ae0c0f3e3 217 Pfam PF01292 Prokaryotic cytochrome b561 9 194 2.1E-20 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_0699 6c68f763d162483037d6a05ae0c0f3e3 217 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 157 179 1.7E-5 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_0699 6c68f763d162483037d6a05ae0c0f3e3 217 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 11 34 1.7E-5 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_0699 6c68f763d162483037d6a05ae0c0f3e3 217 SUPERFAMILY SSF81342 4 204 1.18E-30 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_0481 6f1309578c0ef21327ee403e42d43f17 251 Gene3D G3DSA:3.40.1210.10 1 250 1.6E-93 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Thivi_0481 6f1309578c0ef21327ee403e42d43f17 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 39.961 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Thivi_0481 6f1309578c0ef21327ee403e42d43f17 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 235 1.7E-64 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Thivi_0481 6f1309578c0ef21327ee403e42d43f17 251 SUPERFAMILY SSF64167 1 247 5.49E-85 T 13-10-2018 Thivi_0481 6f1309578c0ef21327ee403e42d43f17 251 Pfam PF01975 Survival protein SurE 3 184 5.4E-58 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Thivi_2680 07305e1aa8b13f52cfb72277e2478f85 422 Gene3D G3DSA:3.40.50.150 146 318 1.2E-15 T 13-10-2018 Thivi_2680 07305e1aa8b13f52cfb72277e2478f85 422 SUPERFAMILY SSF53335 165 298 5.38E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2680 07305e1aa8b13f52cfb72277e2478f85 422 Pfam PF08241 Methyltransferase domain 172 256 1.6E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_2001 dcd348dec97aad748498a2d242135d74 65 Gene3D G3DSA:4.10.220.20 1 58 3.3E-24 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_2001 dcd348dec97aad748498a2d242135d74 65 Pfam PF00556 Antenna complex alpha/beta subunit 7 46 1.1E-13 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_2001 dcd348dec97aad748498a2d242135d74 65 SUPERFAMILY SSF56918 6 52 8.11E-18 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_2001 dcd348dec97aad748498a2d242135d74 65 PRINTS PR00673 Light harvesting protein A chain signature 15 34 5.9E-10 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_2001 dcd348dec97aad748498a2d242135d74 65 PRINTS PR00673 Light harvesting protein A chain signature 8 15 5.9E-10 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_2001 dcd348dec97aad748498a2d242135d74 65 PRINTS PR00673 Light harvesting protein A chain signature 34 45 5.9E-10 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_2001 dcd348dec97aad748498a2d242135d74 65 ProSitePatterns PS00968 Antenna complexes alpha subunits signature. 28 46 - T 13-10-2018 IPR002361 Antenna complex, alpha subunit conserved site GO:0016021|GO:0019684|GO:0019866|GO:0030077|GO:0045156 Thivi_4010 d0d083979f57d768cd4fe74c0d6b2ea0 297 Gene3D G3DSA:1.10.600.10 3 293 3.0E-98 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_4010 d0d083979f57d768cd4fe74c0d6b2ea0 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Thivi_4010 d0d083979f57d768cd4fe74c0d6b2ea0 297 Pfam PF00348 Polyprenyl synthetase 35 265 1.7E-57 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Thivi_4010 d0d083979f57d768cd4fe74c0d6b2ea0 297 SUPERFAMILY SSF48576 9 288 1.58E-86 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_4010 d0d083979f57d768cd4fe74c0d6b2ea0 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Thivi_1138 b77e819f6d9839cce52e484698985f1e 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 69 5.8E-12 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Thivi_1138 b77e819f6d9839cce52e484698985f1e 185 Gene3D G3DSA:1.20.120.1760 4 172 9.5E-11 T 13-10-2018 Thivi_1138 b77e819f6d9839cce52e484698985f1e 185 PIRSF PIRSF000847 2 184 2.7E-43 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 Gene3D G3DSA:1.10.760.10 99 192 2.2E-24 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 SUPERFAMILY SSF46626 102 191 1.6E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 Pfam PF00034 Cytochrome c 107 192 4.7E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 18 89 5.0E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 SUPERFAMILY SSF46626 23 107 9.29E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 Gene3D G3DSA:1.10.760.10 19 94 1.4E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3492 2e5e49b1383758fd1bc13c06bab1115b 199 PIRSF PIRSF000005 2 194 2.5E-54 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_2475 961615e88b67a38f3e7a0a5fef1a6842 508 Pfam PF01580 FtsK/SpoIIIE family 382 428 4.6E-8 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Thivi_2475 961615e88b67a38f3e7a0a5fef1a6842 508 Pfam PF01580 FtsK/SpoIIIE family 255 377 8.2E-32 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Thivi_2475 961615e88b67a38f3e7a0a5fef1a6842 508 SUPERFAMILY SSF52540 255 493 8.36E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2475 961615e88b67a38f3e7a0a5fef1a6842 508 Gene3D G3DSA:3.40.50.300 248 508 1.9E-76 T 13-10-2018 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 SUPERFAMILY SSF51294 279 564 4.91E-5 T 13-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Pfam PF03477 ATP cone domain 13 102 1.9E-18 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Pfam PF14528 LAGLIDADG-like domain 490 548 6.0E-5 T 13-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 590 976 4.0E-111 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 132 280 2.4E-50 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 SUPERFAMILY SSF55608 475 564 6.8E-10 T 13-10-2018 IPR027434 Homing endonuclease Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 SUPERFAMILY SSF51998 590 977 2.14E-106 T 13-10-2018 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Gene3D G3DSA:3.20.70.20 592 989 5.1E-71 T 13-10-2018 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Gene3D G3DSA:3.20.70.20 145 289 3.2E-27 T 13-10-2018 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 SUPERFAMILY SSF51998 132 281 6.71E-41 T 13-10-2018 Thivi_1855 ee9027edd84bfce1850f7d8d3fcbe08b 1002 Gene3D G3DSA:3.10.28.10 389 555 9.9E-16 T 13-10-2018 IPR027434 Homing endonuclease Thivi_3120 ae1a178676a326fc720605e8ca8f386b 229 PIRSF PIRSF023956 2 222 3.9E-67 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_3120 ae1a178676a326fc720605e8ca8f386b 229 SUPERFAMILY SSF53335 4 218 1.65E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3120 ae1a178676a326fc720605e8ca8f386b 229 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 5 220 1.3E-57 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_3120 ae1a178676a326fc720605e8ca8f386b 229 Gene3D G3DSA:3.40.50.150 1 221 2.6E-56 T 13-10-2018 Thivi_3120 ae1a178676a326fc720605e8ca8f386b 229 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 4 220 33.05 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Thivi_0178 d72b60ff82abb822cf3deee295dddfd8 364 Pfam PF09375 Imelysin 52 335 1.5E-36 T 13-10-2018 IPR018976 Imelysin-like domain Thivi_0178 d72b60ff82abb822cf3deee295dddfd8 364 Gene3D G3DSA:1.20.1420.20 24 350 9.2E-49 T 13-10-2018 IPR038352 Imelysin-like domain superfamily Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 Gene3D G3DSA:3.40.50.300 448 640 2.1E-36 T 13-10-2018 Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 SUPERFAMILY SSF52540 18 604 3.73E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 SMART SM00491 479 608 1.3E-41 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 Gene3D G3DSA:3.40.50.300 24 275 2.1E-45 T 13-10-2018 Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 SUPERFAMILY SSF52540 193 597 5.31E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 Pfam PF13307 Helicase C-terminal domain 464 620 2.0E-33 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Thivi_3349 095f406f322c4db25714eb0adca2fcaa 643 SMART SM00487 22 276 0.0034 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 10 604 32.827 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 PIRSF PIRSF004983 7 607 4.6E-137 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Pfam PF16582 Middle domain of thiamine pyrophosphate 248 437 4.5E-9 T 13-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 SUPERFAMILY SSF52518 13 198 1.34E-32 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Gene3D G3DSA:3.40.50.970 417 608 1.6E-47 T 13-10-2018 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 SUPERFAMILY SSF52518 414 589 5.36E-12 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Gene3D G3DSA:3.40.50.970 6 180 5.9E-60 T 13-10-2018 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 16 481 1.1E-123 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Gene3D G3DSA:3.40.50.1220 239 409 3.6E-39 T 13-10-2018 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 187 3.8E-29 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Thivi_3155 56bfc93c94765cc36538f77e55963542 612 SUPERFAMILY SSF52467 173 398 2.73E-9 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_3400 29c35ecd0c6b250faebc8068b6489e69 92 Gene3D G3DSA:3.10.20.280 1 85 8.8E-29 T 13-10-2018 IPR037021 RnfH superfamily Thivi_3400 29c35ecd0c6b250faebc8068b6489e69 92 Pfam PF03658 RnfH family Ubiquitin 1 83 7.5E-33 T 13-10-2018 IPR005346 RnfH protein Thivi_3400 29c35ecd0c6b250faebc8068b6489e69 92 Hamap MF_00460 Protein RnfH [rnfH]. 1 92 22.072 T 13-10-2018 IPR005346 RnfH protein Thivi_3400 29c35ecd0c6b250faebc8068b6489e69 92 SUPERFAMILY SSF54285 1 75 1.05E-24 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_1753 777c7682a3027066c79adec62cbd838d 329 PIRSF PIRSF005211 1 329 2.2E-92 T 13-10-2018 IPR012020 AB hydrolase 4 family Thivi_1753 777c7682a3027066c79adec62cbd838d 329 Pfam PF00561 alpha/beta hydrolase fold 59 294 1.8E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1753 777c7682a3027066c79adec62cbd838d 329 Gene3D G3DSA:3.40.50.1820 36 302 2.3E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1753 777c7682a3027066c79adec62cbd838d 329 SUPERFAMILY SSF53474 9 309 5.51E-36 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1753 777c7682a3027066c79adec62cbd838d 329 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 221 262 - T 13-10-2018 IPR000952 AB hydrolase 4, conserved site Thivi_1767 7018f0973b1f53fb4232c29da0499f3c 292 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 2 252 1.9E-19 T 13-10-2018 IPR010106 Recombination-promoting nuclease RpnA Thivi_1767 7018f0973b1f53fb4232c29da0499f3c 292 Pfam PF11103 Protein of unknown function (DUF2887) 3 204 2.2E-66 T 13-10-2018 IPR022573 Protein of unknown function DUF2887 Thivi_4348 57210a3d16f5192d472189be4700fa55 351 Pfam PF04754 Putative transposase, YhgA-like 3 210 1.8E-28 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like Thivi_0635 352066bcd048f0f941a55de1b4d4dfb0 296 PIRSF PIRSF000090 223 295 0.042 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Thivi_0635 352066bcd048f0f941a55de1b4d4dfb0 296 PIRSF PIRSF000090 3 218 2.4E-68 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Thivi_0635 352066bcd048f0f941a55de1b4d4dfb0 296 SMART SM00893 26 211 4.5E-49 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Thivi_0635 352066bcd048f0f941a55de1b4d4dfb0 296 Pfam PF01012 Electron transfer flavoprotein domain 27 196 4.6E-45 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Thivi_0635 352066bcd048f0f941a55de1b4d4dfb0 296 SUPERFAMILY SSF52402 6 289 6.14E-60 T 13-10-2018 Thivi_3834 0029a28e0fdfc682e7080fbeb7394984 89 Pfam PF04359 Protein of unknown function (DUF493) 6 89 9.5E-30 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 Thivi_3834 0029a28e0fdfc682e7080fbeb7394984 89 Gene3D G3DSA:3.30.70.260 1 89 5.6E-29 T 13-10-2018 Thivi_3834 0029a28e0fdfc682e7080fbeb7394984 89 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 89 21.371 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 Thivi_3834 0029a28e0fdfc682e7080fbeb7394984 89 SUPERFAMILY SSF117991 2 89 1.26E-25 T 13-10-2018 IPR027471 YbeD-like domain superfamily Thivi_2418 a880b6bb07c71b3c80a9f6a8155324f6 200 SMART SM00903 19 166 2.2E-11 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Thivi_2418 a880b6bb07c71b3c80a9f6a8155324f6 200 Pfam PF01613 Flavin reductase like domain 25 147 4.1E-17 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Thivi_2418 a880b6bb07c71b3c80a9f6a8155324f6 200 SUPERFAMILY SSF50475 15 159 7.85E-28 T 13-10-2018 Thivi_2418 a880b6bb07c71b3c80a9f6a8155324f6 200 Gene3D G3DSA:2.30.110.10 17 175 5.3E-27 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Thivi_2239 7da85363976aa4e13d3df1d3a7bc8edc 286 Gene3D G3DSA:3.40.50.300 1 148 4.7E-6 T 13-10-2018 Thivi_2239 7da85363976aa4e13d3df1d3a7bc8edc 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 39.319 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Thivi_2239 7da85363976aa4e13d3df1d3a7bc8edc 286 SUPERFAMILY SSF52540 1 158 2.78E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2239 7da85363976aa4e13d3df1d3a7bc8edc 286 Pfam PF03668 P-loop ATPase protein family 1 285 6.3E-97 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Thivi_2239 7da85363976aa4e13d3df1d3a7bc8edc 286 PIRSF PIRSF005052 1 286 2.6E-109 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 Thivi_1843 e47b550bc65c7d658708529956206393 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 118 2.3E-32 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Thivi_1843 e47b550bc65c7d658708529956206393 122 Gene3D G3DSA:1.10.3830.10 3 122 1.0E-35 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Thivi_1843 e47b550bc65c7d658708529956206393 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 SUPERFAMILY SSF52172 1 122 5.98E-26 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 SUPERFAMILY SSF109604 141 353 9.73E-17 T 13-10-2018 Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 SMART SM00448 1 111 7.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 Gene3D G3DSA:3.40.50.2300 1 131 5.6E-25 T 13-10-2018 Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 Pfam PF00072 Response regulator receiver domain 1 111 1.6E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 Pfam PF08668 HDOD domain 150 326 6.4E-13 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_0646 eaffc94243f11bcfd48b426ab7f57c1c 376 Gene3D G3DSA:1.10.3210.10 137 332 1.0E-12 T 13-10-2018 Thivi_1543 c549b0eca97168d8ce1fc8f43ba5416d 87 Gene3D G3DSA:3.30.2310.20 1 84 1.1E-26 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1543 c549b0eca97168d8ce1fc8f43ba5416d 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 2.7E-14 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thivi_1543 c549b0eca97168d8ce1fc8f43ba5416d 87 SUPERFAMILY SSF143011 2 82 1.96E-24 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_2331 85cade812c59e21d10a6bce05ca42cb5 124 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 12 121 6.8E-33 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Thivi_2331 85cade812c59e21d10a6bce05ca42cb5 124 Hamap MF_00048 UPF0102 protein YraN [yraN]. 10 119 24.057 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Thivi_2331 85cade812c59e21d10a6bce05ca42cb5 124 Gene3D G3DSA:3.40.1350.10 16 124 2.5E-36 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Thivi_2331 85cade812c59e21d10a6bce05ca42cb5 124 Pfam PF02021 Uncharacterised protein family UPF0102 18 106 2.7E-29 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 Thivi_2331 85cade812c59e21d10a6bce05ca42cb5 124 SUPERFAMILY SSF52980 17 108 5.15E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 SMART SM00490 260 341 1.2E-26 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 Gene3D G3DSA:3.40.50.300 215 415 3.1E-43 T 13-10-2018 Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 SUPERFAMILY SSF52540 33 352 9.46E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 Gene3D G3DSA:3.40.50.300 2 211 6.0E-74 T 13-10-2018 Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 SMART SM00487 22 223 5.8E-54 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 Pfam PF00271 Helicase conserved C-terminal domain 240 341 6.9E-27 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_2031 b7ea0a9858cb53c74ab10ecff16fd03b 453 Pfam PF00270 DEAD/DEAH box helicase 27 196 8.0E-48 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_4077 ff50b961940bca0f6e25a1e35b5b2f6f 132 SMART SM00905 4 114 2.5E-41 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Thivi_4077 ff50b961940bca0f6e25a1e35b5b2f6f 132 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 1.0E-27 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Thivi_4077 ff50b961940bca0f6e25a1e35b5b2f6f 132 Gene3D G3DSA:3.30.1130.10 1 121 6.3E-36 T 13-10-2018 Thivi_4077 ff50b961940bca0f6e25a1e35b5b2f6f 132 Pfam PF02152 Dihydroneopterin aldolase 4 113 3.5E-28 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Thivi_4077 ff50b961940bca0f6e25a1e35b5b2f6f 132 SUPERFAMILY SSF55620 1 114 2.17E-32 T 13-10-2018 Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 SUPERFAMILY SSF52540 11 289 6.35E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 PIRSF PIRSF002849 2 314 5.8E-114 T 13-10-2018 Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 SMART SM00382 42 183 1.6E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 Gene3D G3DSA:1.10.8.300 206 310 2.2E-21 T 13-10-2018 Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 Gene3D G3DSA:3.40.50.300 26 191 7.6E-44 T 13-10-2018 Thivi_2604 6a253bd9bf71d8c2b82c5cf24ef50027 314 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 45 175 1.1E-60 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Thivi_3775 717eaf7fe1caf41fe2fba6923a2da069 408 Pfam PF00534 Glycosyl transferases group 1 209 368 1.6E-24 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3775 717eaf7fe1caf41fe2fba6923a2da069 408 Gene3D G3DSA:3.40.50.2000 19 206 2.7E-27 T 13-10-2018 Thivi_3775 717eaf7fe1caf41fe2fba6923a2da069 408 SUPERFAMILY SSF53756 20 392 1.95E-74 T 13-10-2018 Thivi_3775 717eaf7fe1caf41fe2fba6923a2da069 408 Pfam PF13439 Glycosyltransferase Family 4 30 199 1.4E-26 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_3775 717eaf7fe1caf41fe2fba6923a2da069 408 Gene3D G3DSA:3.40.50.2000 207 372 1.3E-35 T 13-10-2018 Thivi_3344 cc7af606be4caf55015a56a6a82ef30f 298 Pfam PF05673 Protein of unknown function (DUF815) 33 288 3.4E-104 T 13-10-2018 IPR008533 Domain of unknown function DUF815 Thivi_3344 cc7af606be4caf55015a56a6a82ef30f 298 Gene3D G3DSA:3.40.50.300 54 193 9.0E-10 T 13-10-2018 Thivi_3344 cc7af606be4caf55015a56a6a82ef30f 298 SUPERFAMILY SSF52540 44 188 1.44E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0864 e75e2aa9156681aee2604d9a8d144408 123 Gene3D G3DSA:3.30.420.130 1 106 1.9E-31 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_0864 e75e2aa9156681aee2604d9a8d144408 123 SUPERFAMILY SSF53146 1 121 8.63E-32 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_0864 e75e2aa9156681aee2604d9a8d144408 123 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 104 1.2E-20 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_1019 b1dbbd6b957f55428a280aae03f1d1b9 681 SUPERFAMILY SSF52540 14 261 1.79E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1019 b1dbbd6b957f55428a280aae03f1d1b9 681 Gene3D G3DSA:3.40.50.300 10 270 1.0E-52 T 13-10-2018 Thivi_1019 b1dbbd6b957f55428a280aae03f1d1b9 681 Pfam PF13614 AAA domain 14 185 8.5E-36 T 13-10-2018 IPR025669 AAA domain Thivi_1019 b1dbbd6b957f55428a280aae03f1d1b9 681 Pfam PF05036 Sporulation related domain 618 675 2.6E-4 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 Gene3D G3DSA:3.40.50.1820 49 336 2.3E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 PRINTS PR00111 Alpha/beta hydrolase fold signature 273 287 2.3E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 PRINTS PR00111 Alpha/beta hydrolase fold signature 175 188 2.3E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 128 2.3E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 174 2.3E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 SUPERFAMILY SSF53474 65 335 1.1E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2458 b71d437bc60c9cfd7e009b8de8192955 360 Pfam PF12146 Serine aminopeptidase, S33 84 319 4.9E-53 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Thivi_1249 917ff045c361861e46927b299560ccc2 325 Gene3D G3DSA:3.30.450.20 1 137 3.8E-10 T 13-10-2018 Thivi_1249 917ff045c361861e46927b299560ccc2 325 SUPERFAMILY SSF103190 50 143 3.77E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Thivi_2683 bf668d0f0afcbcb4f75bfd170970e0c8 696 Pfam PF01757 Acyltransferase family 13 351 1.4E-22 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Thivi_0687 36c3bd09bf8e5f819d82061c63cbf2eb 124 Pfam PF07238 PilZ domain 10 116 6.3E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_0687 36c3bd09bf8e5f819d82061c63cbf2eb 124 SUPERFAMILY SSF141371 5 114 1.71E-6 T 13-10-2018 Thivi_0687 36c3bd09bf8e5f819d82061c63cbf2eb 124 Gene3D G3DSA:2.40.10.220 38 116 8.7E-8 T 13-10-2018 Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 11 214 1.5E-65 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 8 217 36.042 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 212 4.4E-59 T 13-10-2018 Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 SUPERFAMILY SSF53335 20 213 1.2E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 Gene3D G3DSA:3.40.50.150 6 219 7.3E-74 T 13-10-2018 Thivi_0482 babd27c0ebb55c6438b6fb373c1c523a 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 138 153 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Gene3D G3DSA:3.20.20.80 316 615 2.6E-34 T 13-10-2018 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Gene3D G3DSA:2.60.40.10 2 92 1.5E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Pfam PF00128 Alpha amylase, catalytic domain 374 436 2.5E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Pfam PF00128 Alpha amylase, catalytic domain 164 245 1.7E-24 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 SUPERFAMILY SSF51445 116 625 3.5E-68 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Pfam PF16738 Starch-binding module 26 6 72 4.0E-18 T 13-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 Gene3D G3DSA:3.20.20.80 117 301 1.3E-46 T 13-10-2018 Thivi_1324 95def895a6613d159a60d034e4993bb9 717 SMART SM00642 128 618 2.8E-44 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_3077 04fe8c73e1ee1a96778fad344cd377ff 212 Pfam PF02581 Thiamine monophosphate synthase 8 188 6.7E-52 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_3077 04fe8c73e1ee1a96778fad344cd377ff 212 SUPERFAMILY SSF51391 4 205 2.75E-57 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_3077 04fe8c73e1ee1a96778fad344cd377ff 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 207 25.449 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_3077 04fe8c73e1ee1a96778fad344cd377ff 212 Gene3D G3DSA:3.20.20.70 1 208 2.0E-57 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3077 04fe8c73e1ee1a96778fad344cd377ff 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 200 1.8E-54 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 Pfam PF00128 Alpha amylase, catalytic domain 284 463 3.6E-8 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 Pfam PF00128 Alpha amylase, catalytic domain 169 248 1.3E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 Gene3D G3DSA:3.20.20.80 132 514 2.4E-61 T 13-10-2018 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 Gene3D G3DSA:2.60.40.10 1 124 1.0E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 SUPERFAMILY SSF51011 532 605 6.06E-6 T 13-10-2018 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 SUPERFAMILY SSF81296 31 118 9.45E-6 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 SMART SM00642 147 506 5.8E-8 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 SUPERFAMILY SSF51445 135 513 2.55E-65 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_3764 ebe2e159000f7b48e0231867ead777da 609 Pfam PF11941 Domain of unknown function (DUF3459) 498 580 2.5E-5 T 13-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 Pfam PF08274 PhnA Zinc-Ribbon 4 32 1.4E-11 T 13-10-2018 IPR013987 PhnA protein, N-terminal Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 Gene3D G3DSA:2.30.30.40 44 113 1.3E-29 T 13-10-2018 Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 Pfam PF03831 PhnA domain 47 113 8.7E-30 T 13-10-2018 IPR013988 PhnA protein, C-terminal Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 SUPERFAMILY SSF57783 3 35 3.57E-11 T 13-10-2018 Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 SUPERFAMILY SSF82057 44 113 1.14E-24 T 13-10-2018 Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 113 1.4E-39 T 13-10-2018 IPR004624 PhnA protein Thivi_2157 b4968caa0a9a4c1dea2cf91a89eeb9c0 113 Gene3D G3DSA:2.20.25.10 1 41 1.0E-12 T 13-10-2018 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 Gene3D G3DSA:1.25.40.10 428 687 1.5E-33 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SUPERFAMILY SSF48452 436 621 8.46E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 Pfam PF13424 Tetratricopeptide repeat 444 512 1.9E-8 T 13-10-2018 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SMART SM00028 584 617 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SMART SM00028 482 515 1.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SMART SM00028 550 583 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SMART SM00028 516 549 330.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 SMART SM00028 443 476 5.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_0139 051cbc2777fb36d51378b9045a54a971 691 Pfam PF13432 Tetratricopeptide repeat 558 617 3.9E-6 T 13-10-2018 Thivi_2199 8610be05d3c0e723a1a9163de23b22ea 401 Pfam PF13546 DDE superfamily endonuclease 6 238 4.2E-45 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_2199 8610be05d3c0e723a1a9163de23b22ea 401 SUPERFAMILY SSF53098 7 343 2.5E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2738 7d7d54b339d3417d8fba621a298449ec 161 Gene3D G3DSA:3.30.420.130 17 140 2.3E-33 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2738 7d7d54b339d3417d8fba621a298449ec 161 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 33 123 8.4E-19 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_2738 7d7d54b339d3417d8fba621a298449ec 161 SUPERFAMILY SSF53146 19 138 5.49E-30 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 Gene3D G3DSA:3.40.50.1980 7 106 2.4E-5 T 13-10-2018 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 SUPERFAMILY SSF53807 8 406 3.92E-75 T 13-10-2018 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 12 394 1.7E-35 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 PIRSF PIRSF000163 1 477 9.4E-130 T 13-10-2018 IPR016209 Protochlorophyllide reductase, ChlB, light independent GO:0016730|GO:0046148|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 Gene3D G3DSA:3.40.50.1980 143 254 9.1E-25 T 13-10-2018 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 424 474 4.3E-11 T 13-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2003 6d0f81562d4524c125eb3f48a6ec5a64 478 TIGRFAM TIGR02014 BchZ: chlorophyllide reductase subunit Z 2 472 1.7E-243 T 13-10-2018 IPR010244 Chlorophyllide reductase subunit Z GO:0016730|GO:0030494|GO:0055114 KEGG: 00860+1.3.7.15|MetaCyc: PWY-5526 Thivi_3848 b72343b4bd806a8c8261b360384b0adb 320 SUPERFAMILY SSF53474 60 199 8.02E-7 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3848 b72343b4bd806a8c8261b360384b0adb 320 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 63 254 6.0E-20 T 13-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like Thivi_3848 b72343b4bd806a8c8261b360384b0adb 320 Gene3D G3DSA:3.40.50.1820 39 179 3.1E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2090 bb8cc30b3261b07f2bd610b09b5cedd0 360 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 38 353 3.5E-136 T 13-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC Thivi_2090 bb8cc30b3261b07f2bd610b09b5cedd0 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 342 3.7E-39 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Thivi_0314 9368333197ee1d8d6a7efb079c1bab2c 121 Pfam PF00072 Response regulator receiver domain 7 115 5.0E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0314 9368333197ee1d8d6a7efb079c1bab2c 121 SUPERFAMILY SSF52172 4 119 5.98E-29 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0314 9368333197ee1d8d6a7efb079c1bab2c 121 SMART SM00448 4 116 4.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0314 9368333197ee1d8d6a7efb079c1bab2c 121 Gene3D G3DSA:3.40.50.2300 2 121 2.2E-30 T 13-10-2018 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 SUPERFAMILY SSF51366 9 231 5.54E-74 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 62 75 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 8 235 39.694 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 12 230 7.6E-55 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 SMART SM00934 10 230 1.5E-94 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 10 226 1.2E-46 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Thivi_0535 d5e1c9e19c93b68fb68e8e82225ed246 241 Gene3D G3DSA:3.20.20.70 4 235 3.5E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4584 1faa96a1b7bb9d5a5ba4ba221d2da062 1361 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1057 1307 2.3E-30 T 13-10-2018 IPR007452 Translocation and assembly module TamB Thivi_3966 1437dbc474b1fad35cae5768dfd50d62 153 Gene3D G3DSA:3.30.420.10 1 145 3.1E-57 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_3966 1437dbc474b1fad35cae5768dfd50d62 153 SUPERFAMILY SSF53098 5 141 2.78E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3966 1437dbc474b1fad35cae5768dfd50d62 153 Pfam PF00075 RNase H 3 141 1.1E-45 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Thivi_3966 1437dbc474b1fad35cae5768dfd50d62 153 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 36.07 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 Gene3D G3DSA:3.40.190.10 178 276 7.5E-51 T 13-10-2018 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 Gene3D G3DSA:3.40.190.10 105 298 7.5E-51 T 13-10-2018 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 Pfam PF03466 LysR substrate binding domain 103 302 6.2E-38 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 Gene3D G3DSA:1.10.10.10 12 94 1.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 SUPERFAMILY SSF53850 104 309 1.99E-39 T 13-10-2018 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 SUPERFAMILY SSF46785 15 122 1.51E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 2.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 2.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 2.1E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_3703 ef1e46d398bf4a34df2e5dd80366a9e9 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 1.6E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 PIRSF PIRSF006223 4 111 1.7E-28 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 107 1.4E-28 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 SUPERFAMILY SSF69721 1 107 2.22E-26 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 Pfam PF04358 DsrC like protein 6 107 2.1E-30 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 Gene3D G3DSA:3.30.1420.10 1 39 1.1E-8 T 13-10-2018 Thivi_2695 20d31dc31f8ec269dd0140f6a18fdfe3 113 Gene3D G3DSA:1.10.10.370 41 110 3.3E-23 T 13-10-2018 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 305 324 3.7E-14 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 3.7E-14 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 3.7E-14 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 Pfam PF00209 Sodium:neurotransmitter symporter family 158 448 2.6E-20 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 Pfam PF00209 Sodium:neurotransmitter symporter family 10 125 3.2E-27 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Thivi_0936 0c44e7475152a4ce8f6e6b3b27f0341a 458 SUPERFAMILY SSF161070 9 449 1.31E-130 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Thivi_0014 8bb361f86a7157105ef6e28fee727dba 58 SUPERFAMILY SSF57829 2 55 2.62E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Thivi_0014 8bb361f86a7157105ef6e28fee727dba 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.986 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0014 8bb361f86a7157105ef6e28fee727dba 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 4.2E-21 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0014 8bb361f86a7157105ef6e28fee727dba 58 Pfam PF01783 Ribosomal L32p protein family 2 56 4.4E-21 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 Pfam PF01026 TatD related DNase 3 255 3.0E-76 T 13-10-2018 IPR001130 TatD family GO:0016788 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 2.8E-80 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 PIRSF PIRSF005902 1 257 1.4E-74 T 13-10-2018 IPR001130 TatD family GO:0016788 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 SUPERFAMILY SSF51556 1 256 5.16E-85 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 Gene3D G3DSA:3.20.20.140 1 257 1.8E-89 T 13-10-2018 Thivi_0026 5b7d0b710489e703d092fbb5f508742e 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Thivi_0718 4a444e786534aaed0e4d67c4e7c0003f 265 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 265 46.248 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Thivi_0718 4a444e786534aaed0e4d67c4e7c0003f 265 Pfam PF02654 Cobalamin-5-phosphate synthase 19 255 2.6E-47 T 13-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Thivi_2756 ec63781299ef1616eff34cc0f159258b 169 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 25 163 9.3E-59 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_2756 ec63781299ef1616eff34cc0f159258b 169 Gene3D G3DSA:3.10.129.10 17 167 4.1E-58 T 13-10-2018 Thivi_2756 ec63781299ef1616eff34cc0f159258b 169 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 25 166 35.079 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_2756 ec63781299ef1616eff34cc0f159258b 169 Pfam PF07977 FabA-like domain 34 158 6.5E-36 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Thivi_2756 ec63781299ef1616eff34cc0f159258b 169 SUPERFAMILY SSF54637 24 163 2.18E-47 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 SMART SM00671 87 122 5.8E-6 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 SMART SM00671 51 86 0.0017 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 Pfam PF08238 Sel1 repeat 87 122 4.3E-5 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 Pfam PF08238 Sel1 repeat 58 86 2.1E-4 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 SUPERFAMILY SSF53955 156 289 4.5E-44 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 Gene3D G3DSA:1.10.530.10 148 292 1.6E-40 T 13-10-2018 Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 Pfam PF01464 Transglycosylase SLT domain 178 273 9.9E-26 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 191 219 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 Gene3D G3DSA:1.25.40.10 39 147 2.8E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0166 f3b120a2fa7d7bb2b10ec076ecb5e78a 293 SUPERFAMILY SSF81901 41 126 4.32E-15 T 13-10-2018 Thivi_2069 8fbde006db69d13fe4da671ce817d102 341 SUPERFAMILY SSF52540 31 314 7.96E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2069 8fbde006db69d13fe4da671ce817d102 341 Gene3D G3DSA:3.40.50.300 40 206 3.8E-47 T 13-10-2018 Thivi_2069 8fbde006db69d13fe4da671ce817d102 341 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 59 189 3.0E-64 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Thivi_2069 8fbde006db69d13fe4da671ce817d102 341 PIRSF PIRSF002849 4 341 2.7E-127 T 13-10-2018 Thivi_2069 8fbde006db69d13fe4da671ce817d102 341 Gene3D G3DSA:1.10.8.300 223 338 7.8E-35 T 13-10-2018 Thivi_0584 b2cf98b080120d3acb9decd4bfc8588f 96 SUPERFAMILY SSF51230 8 70 4.71E-6 T 13-10-2018 IPR011053 Single hybrid motif Thivi_0584 b2cf98b080120d3acb9decd4bfc8588f 96 Gene3D G3DSA:2.40.50.100 1 72 8.2E-7 T 13-10-2018 Thivi_0584 b2cf98b080120d3acb9decd4bfc8588f 96 Pfam PF00364 Biotin-requiring enzyme 9 68 5.4E-5 T 13-10-2018 IPR000089 Biotin/lipoyl attachment Thivi_4202 6a10f313bca55c275ee92b9e863b4450 203 Pfam PF00573 Ribosomal protein L4/L1 family 14 201 3.6E-64 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Thivi_4202 6a10f313bca55c275ee92b9e863b4450 203 Gene3D G3DSA:3.40.1370.10 5 203 3.9E-70 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4202 6a10f313bca55c275ee92b9e863b4450 203 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 203 34.248 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4202 6a10f313bca55c275ee92b9e863b4450 203 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 14 200 3.7E-73 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4202 6a10f313bca55c275ee92b9e863b4450 203 SUPERFAMILY SSF52166 10 202 9.81E-71 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Gene3D G3DSA:3.40.50.300 99 467 1.5E-144 T 13-10-2018 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Gene3D G3DSA:2.40.50.100 141 212 1.5E-144 T 13-10-2018 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 SUPERFAMILY SSF47917 480 560 7.06E-6 T 13-10-2018 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 458 467 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Gene3D G3DSA:2.30.30.650 57 97 3.6E-10 T 13-10-2018 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 12 608 44.06 T 13-10-2018 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 SUPERFAMILY SSF52540 211 473 4.25E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 59 94 7.6E-4 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 110 222 9.3E-33 T 13-10-2018 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 247 467 1.5E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_3984 cdb45cf98f87d677becf8a294181d0a4 609 Gene3D G3DSA:1.10.1140.10 468 597 1.2E-19 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_0745 62921ec6c2b1dfa661f06a4e31ddb733 142 Hamap MF_01114 Regulatory protein RecX [recX]. 2 142 12.914 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Thivi_0745 62921ec6c2b1dfa661f06a4e31ddb733 142 Gene3D G3DSA:1.10.10.10 47 90 7.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0745 62921ec6c2b1dfa661f06a4e31ddb733 142 Gene3D G3DSA:1.10.10.10 93 140 1.3E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0745 62921ec6c2b1dfa661f06a4e31ddb733 142 Pfam PF02631 RecX family 23 139 2.3E-24 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Thivi_0745 62921ec6c2b1dfa661f06a4e31ddb733 142 Gene3D G3DSA:1.10.10.10 2 45 1.0E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3522 891507e3e143a81757caa1ee49f0b592 137 Gene3D G3DSA:3.90.75.20 2 66 6.0E-7 T 13-10-2018 Thivi_3522 891507e3e143a81757caa1ee49f0b592 137 Pfam PF13392 HNH endonuclease 18 60 1.0E-15 T 13-10-2018 IPR003615 HNH nuclease Thivi_3522 891507e3e143a81757caa1ee49f0b592 137 SUPERFAMILY SSF54060 5 62 2.82E-14 T 13-10-2018 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 PRINTS PR00721 Stomatin signature 31 53 2.1E-8 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 PRINTS PR00721 Stomatin signature 182 203 2.1E-8 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 PRINTS PR00721 Stomatin signature 79 100 2.1E-8 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 PRINTS PR00721 Stomatin signature 163 181 2.1E-8 T 13-10-2018 IPR001972 Stomatin family GO:0016020 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 SUPERFAMILY SSF117892 56 193 3.01E-28 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 Gene3D G3DSA:3.30.479.30 53 189 7.8E-24 T 13-10-2018 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 SMART SM00244 24 187 6.0E-37 T 13-10-2018 IPR001107 Band 7 domain Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 Pfam PF01145 SPFH domain / Band 7 family 28 202 6.3E-29 T 13-10-2018 IPR001107 Band 7 domain Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 TIGRFAM TIGR01932 hflC: HflC protein 152 286 1.9E-46 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Thivi_0412 ca9d558b880efe9ef949801a3c0d097b 293 PIRSF PIRSF005651 2 292 5.0E-93 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Thivi_1137 b8ce78946ae03dc5985cca482baa2493 239 SUPERFAMILY SSF52540 48 215 8.6E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1137 b8ce78946ae03dc5985cca482baa2493 239 Gene3D G3DSA:3.40.50.300 4 168 1.1E-33 T 13-10-2018 Thivi_1137 b8ce78946ae03dc5985cca482baa2493 239 Gene3D G3DSA:1.10.8.60 171 236 2.9E-18 T 13-10-2018 Thivi_1137 b8ce78946ae03dc5985cca482baa2493 239 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 12 235 9.3E-70 T 13-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 Thivi_1137 b8ce78946ae03dc5985cca482baa2493 239 Pfam PF00308 Bacterial dnaA protein 38 215 1.2E-12 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Thivi_2984 7e34a76e2fa0df156dd801d341dead96 292 PIRSF PIRSF003097 1 288 2.2E-68 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Thivi_2291 2017706eecad7495829226223e1fcff8 353 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 131 1.1E-38 T 13-10-2018 IPR010657 ImpA, N-terminal Thivi_2291 2017706eecad7495829226223e1fcff8 353 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 2 342 2.6E-82 T 13-10-2018 IPR017740 Type VI secretion system-associated, ImpA Thivi_0987 30f3cfa34c9057d48592c72ec85e576f 179 Pfam PF07295 Zinc-ribbon containing domain 27 171 2.2E-51 T 13-10-2018 IPR009912 Zinc-ribbon containing domain Thivi_1058 632877fdfabc3022c557a284d4a83852 366 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 119 366 1.8E-70 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1058 632877fdfabc3022c557a284d4a83852 366 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 41 52 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1058 632877fdfabc3022c557a284d4a83852 366 SUPERFAMILY SSF56762 14 366 1.2E-99 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1058 632877fdfabc3022c557a284d4a83852 366 Gene3D G3DSA:1.10.645.20 6 366 1.5E-123 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3386 2c67e64eec71a45a395e9dd0618d394b 175 SUPERFAMILY SSF101327 6 165 7.32E-35 T 13-10-2018 IPR036255 YgfB-like superfamily Thivi_3386 2c67e64eec71a45a395e9dd0618d394b 175 Gene3D G3DSA:1.20.120.740 1 173 2.6E-51 T 13-10-2018 Thivi_3386 2c67e64eec71a45a395e9dd0618d394b 175 Pfam PF03695 Uncharacterised protein family (UPF0149) 2 164 3.4E-32 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 Gene3D G3DSA:3.30.450.20 192 314 1.0E-7 T 13-10-2018 Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 SUPERFAMILY SSF55785 192 304 4.38E-9 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 316 472 1.5E-50 T 13-10-2018 IPR000160 GGDEF domain Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 SMART SM00267 307 473 7.5E-59 T 13-10-2018 IPR000160 GGDEF domain Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 SUPERFAMILY SSF55073 323 473 1.73E-46 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 471 6.5E-46 T 13-10-2018 IPR000160 GGDEF domain Thivi_2503 a10ac92a7325e18e4513aafedaaf6cf1 473 Gene3D G3DSA:3.30.70.270 315 473 3.8E-55 T 13-10-2018 Thivi_4246 66f2409282b1703a18da48208a94fa99 101 Pfam PF03927 NapD protein 18 87 3.0E-17 T 13-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly Thivi_4246 66f2409282b1703a18da48208a94fa99 101 Gene3D G3DSA:3.30.70.920 17 84 3.4E-12 T 13-10-2018 Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 SMART SM00671 154 189 8.3E-7 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 SMART SM00671 117 153 1.0E-8 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 Pfam PF08238 Sel1 repeat 156 184 1.0E-6 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 Pfam PF08238 Sel1 repeat 117 153 1.8E-8 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 Gene3D G3DSA:1.25.40.10 88 189 3.9E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4542 4facf400f73498b7118c415075e8b7a8 315 SUPERFAMILY SSF81901 98 187 2.09E-21 T 13-10-2018 Thivi_3131 7665ff5707b58e053104fe3fbc9a9b4c 208 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 13-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Thivi_3131 7665ff5707b58e053104fe3fbc9a9b4c 208 SUPERFAMILY SSF52266 23 199 1.53E-46 T 13-10-2018 Thivi_3131 7665ff5707b58e053104fe3fbc9a9b4c 208 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 184 7.9E-25 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain Thivi_3131 7665ff5707b58e053104fe3fbc9a9b4c 208 Gene3D G3DSA:3.40.50.1110 22 204 4.2E-67 T 13-10-2018 IPR036514 SGNH hydrolase superfamily Thivi_3626 c4e6ff64234daed7f5b6ad353413ad07 144 Pfam PF09656 Putative transmembrane protein (PGPGW) 72 101 6.0E-8 T 13-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane Thivi_3496 f1ffd8d02f86a09677bb6eeeefa37a0b 320 Pfam PF13391 HNH endonuclease 212 262 8.7E-8 T 13-10-2018 IPR003615 HNH nuclease Thivi_1837 825882c8097cd48dd2f8efd979a80362 116 ProDom PD394905 PM1122 UNCHARACTERIZED 17 102 6.0E-18 T 13-10-2018 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 Gene3D G3DSA:3.30.450.40 317 456 6.0E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_4260 9a753df35187937db47ec0188a9645cf 691 Gene3D G3DSA:1.10.287.130 457 533 2.2E-8 T 13-10-2018 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SUPERFAMILY SSF47384 464 534 3.34E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 573 678 5.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SUPERFAMILY SSF55781 321 465 2.84E-12 T 13-10-2018 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SMART SM00065 315 463 0.0016 T 13-10-2018 IPR003018 GAF domain GO:0005515 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 7 677 5.8E-242 T 13-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SUPERFAMILY SSF55874 538 678 1.22E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SMART SM00387 572 680 1.1E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_4260 9a753df35187937db47ec0188a9645cf 691 Gene3D G3DSA:3.30.565.10 534 678 9.4E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4260 9a753df35187937db47ec0188a9645cf 691 SMART SM00388 470 536 1.5E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 677 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 658 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_4260 9a753df35187937db47ec0188a9645cf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 638 1.8E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Thivi_2257 0a3ad28bab0f88cd65ead11e1fee77b5 255 Gene3D G3DSA:3.90.550.10 2 244 3.0E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2257 0a3ad28bab0f88cd65ead11e1fee77b5 255 Pfam PF00535 Glycosyl transferase family 2 5 132 7.4E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_2257 0a3ad28bab0f88cd65ead11e1fee77b5 255 SUPERFAMILY SSF53448 4 224 2.39E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0550 6903d22afe342dafd17d3cf6b43a5e7a 243 Pfam PF02665 Nitrate reductase gamma subunit 76 212 4.2E-13 T 13-10-2018 IPR023234 NarG-like domain Thivi_0550 6903d22afe342dafd17d3cf6b43a5e7a 243 SUPERFAMILY SSF103501 5 232 1.29E-45 T 13-10-2018 IPR036197 NarG-like superfamily Thivi_0550 6903d22afe342dafd17d3cf6b43a5e7a 243 Gene3D G3DSA:1.20.950.20 46 221 4.9E-17 T 13-10-2018 Thivi_0409 05fedb697ba790c673fa37b779e5cc27 88 Pfam PF17209 Hfq protein 7 69 9.0E-32 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Thivi_0409 05fedb697ba790c673fa37b779e5cc27 88 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.1E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Thivi_0409 05fedb697ba790c673fa37b779e5cc27 88 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 28.019 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Thivi_0409 05fedb697ba790c673fa37b779e5cc27 88 SUPERFAMILY SSF50182 7 69 8.86E-25 T 13-10-2018 IPR010920 LSM domain superfamily Thivi_0409 05fedb697ba790c673fa37b779e5cc27 88 Gene3D G3DSA:2.30.30.100 1 70 9.0E-34 T 13-10-2018 Thivi_1204 56989cd54cc930327b1810e5f932fcd3 124 Gene3D G3DSA:3.40.50.12740 5 124 3.1E-42 T 13-10-2018 Thivi_1204 56989cd54cc930327b1810e5f932fcd3 124 Pfam PF00072 Response regulator receiver domain 7 118 5.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1204 56989cd54cc930327b1810e5f932fcd3 124 SMART SM00448 5 118 1.7E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1204 56989cd54cc930327b1810e5f932fcd3 124 SUPERFAMILY SSF52172 3 123 2.13E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2830 7ac3808f258c253fc50daf5884675765 194 SUPERFAMILY SSF56784 7 159 7.13E-40 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2830 7ac3808f258c253fc50daf5884675765 194 Pfam PF13242 HAD-hyrolase-like 104 158 7.7E-8 T 13-10-2018 Thivi_2830 7ac3808f258c253fc50daf5884675765 194 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 9 150 4.1E-45 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Thivi_2830 7ac3808f258c253fc50daf5884675765 194 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 151 1.4E-34 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Thivi_2830 7ac3808f258c253fc50daf5884675765 194 PIRSF PIRSF004682 2 183 8.4E-51 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Thivi_2830 7ac3808f258c253fc50daf5884675765 194 Gene3D G3DSA:3.40.50.1000 7 190 1.3E-48 T 13-10-2018 IPR023214 HAD superfamily Thivi_3137 68f967851495b7557fed21b27aded97d 521 Pfam PF14559 Tetratricopeptide repeat 379 444 1.0E-7 T 13-10-2018 Thivi_3137 68f967851495b7557fed21b27aded97d 521 Gene3D G3DSA:1.25.40.10 266 509 2.7E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3137 68f967851495b7557fed21b27aded97d 521 Gene3D G3DSA:3.30.2010.10 105 172 1.8E-5 T 13-10-2018 Thivi_3137 68f967851495b7557fed21b27aded97d 521 Pfam PF01435 Peptidase family M48 113 282 1.2E-30 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Thivi_3137 68f967851495b7557fed21b27aded97d 521 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 28 510 35.955 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 Thivi_3137 68f967851495b7557fed21b27aded97d 521 SUPERFAMILY SSF48452 337 482 1.3E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1364 3151b82dbfadf9767e6d96546a2d1e34 272 Pfam PF02673 Bacitracin resistance protein BacA 10 260 2.8E-85 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Thivi_1364 3151b82dbfadf9767e6d96546a2d1e34 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 257 8.7E-79 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Thivi_1364 3151b82dbfadf9767e6d96546a2d1e34 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 265 18.015 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 Pfam PF00547 Urease, gamma subunit 1 99 9.1E-48 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.015 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 Gene3D G3DSA:3.30.280.10 4 100 6.1E-48 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 6.0E-40 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 2.3E-55 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 PIRSF PIRSF001223 1 100 1.3E-50 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_2085 bc0cf379fca4fa727dd098e49b555699 100 SUPERFAMILY SSF54111 1 99 4.45E-47 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 Thivi_1451 02626d443014db0043942dab6772d080 481 Pfam PF06122 Conjugative relaxosome accessory transposon protein 33 398 4.9E-99 T 13-10-2018 IPR010927 Type IV conjugative transfer system protein TraH Thivi_1013 422ac0c2590deb421c0abc80fd440028 110 Pfam PF00034 Cytochrome c 29 105 6.1E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1013 422ac0c2590deb421c0abc80fd440028 110 Gene3D G3DSA:1.10.760.10 3 110 1.2E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1013 422ac0c2590deb421c0abc80fd440028 110 SUPERFAMILY SSF46626 1 106 2.96E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3864 be17a469b89439ce28222e523c03c6a4 677 Pfam PF01432 Peptidase family M3 219 674 2.7E-153 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Thivi_3864 be17a469b89439ce28222e523c03c6a4 677 SUPERFAMILY SSF55486 1 674 1.87E-207 T 13-10-2018 Thivi_3864 be17a469b89439ce28222e523c03c6a4 677 Gene3D G3DSA:1.10.1370.40 14 672 1.7E-271 T 13-10-2018 Thivi_3864 be17a469b89439ce28222e523c03c6a4 677 Gene3D G3DSA:1.10.1370.10 137 607 1.7E-271 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Thivi_3949 54a02e396a694de890a8c4803220afa6 511 SMART SM00388 300 367 2.4E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3949 54a02e396a694de890a8c4803220afa6 511 Gene3D G3DSA:1.10.287.130 284 364 5.3E-13 T 13-10-2018 Thivi_3949 54a02e396a694de890a8c4803220afa6 511 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 494 2.7E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3949 54a02e396a694de890a8c4803220afa6 511 SMART SM00387 406 510 9.3E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_3949 54a02e396a694de890a8c4803220afa6 511 SUPERFAMILY SSF47384 295 363 9.02E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Thivi_3949 54a02e396a694de890a8c4803220afa6 511 Pfam PF00512 His Kinase A (phospho-acceptor) domain 301 363 7.1E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Thivi_3949 54a02e396a694de890a8c4803220afa6 511 SUPERFAMILY SSF55874 357 509 2.75E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3949 54a02e396a694de890a8c4803220afa6 511 Gene3D G3DSA:3.30.565.10 369 511 5.0E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_3426 60f054692ec50e5551e47be5293a1da9 558 Pfam PF03781 Sulfatase-modifying factor enzyme 1 116 323 2.9E-25 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_3426 60f054692ec50e5551e47be5293a1da9 558 SUPERFAMILY SSF56436 116 325 1.77E-32 T 13-10-2018 IPR016187 C-type lectin fold Thivi_3426 60f054692ec50e5551e47be5293a1da9 558 Gene3D G3DSA:3.90.1580.10 107 325 9.6E-31 T 13-10-2018 Thivi_3801 3932808000248d6c1410f83f0a3d71e4 224 SUPERFAMILY SSF52821 78 223 3.54E-17 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3801 3932808000248d6c1410f83f0a3d71e4 224 Gene3D G3DSA:3.40.250.10 78 223 5.1E-18 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3801 3932808000248d6c1410f83f0a3d71e4 224 Pfam PF00581 Rhodanese-like domain 98 215 2.2E-10 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3801 3932808000248d6c1410f83f0a3d71e4 224 SMART SM00450 90 220 1.4E-5 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_1851 4b6b11b9c26f6e61f9e0b332dba15322 164 Pfam PF02130 Uncharacterized protein family UPF0054 24 147 3.9E-34 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Thivi_1851 4b6b11b9c26f6e61f9e0b332dba15322 164 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 6 153 23.062 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Thivi_1851 4b6b11b9c26f6e61f9e0b332dba15322 164 Gene3D G3DSA:3.40.390.30 2 160 1.5E-49 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Thivi_1851 4b6b11b9c26f6e61f9e0b332dba15322 164 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 148 1.5E-33 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Thivi_1851 4b6b11b9c26f6e61f9e0b332dba15322 164 SUPERFAMILY SSF55486 7 155 3.91E-43 T 13-10-2018 Thivi_2582 2ecf620fe20c69f22b711792edb3a664 131 SUPERFAMILY SSF50685 26 119 5.58E-13 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_2582 2ecf620fe20c69f22b711792edb3a664 131 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 123 22.034 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Thivi_2582 2ecf620fe20c69f22b711792edb3a664 131 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 33 124 4.9E-40 T 13-10-2018 IPR012997 Rare lipoprotein A Thivi_2582 2ecf620fe20c69f22b711792edb3a664 131 Pfam PF03330 Lytic transglycolase 30 119 6.6E-25 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Thivi_2582 2ecf620fe20c69f22b711792edb3a664 131 Gene3D G3DSA:2.40.40.10 30 124 8.1E-36 T 13-10-2018 IPR036908 RlpA-like domain superfamily Thivi_1367 45cd45b834147ce6fb190c560de004eb 417 Gene3D G3DSA:1.20.1530.20 2 416 7.2E-14 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Thivi_1367 45cd45b834147ce6fb190c560de004eb 417 Pfam PF00999 Sodium/hydrogen exchanger family 9 406 6.8E-54 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 SUPERFAMILY SSF50692 1 121 4.85E-47 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 PIRSF PIRSF006246 1 125 1.6E-51 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 Gene3D G3DSA:2.40.40.20 1 126 5.1E-52 T 13-10-2018 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 2.0E-42 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.083 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 9.4E-51 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Thivi_0100 18a689108b01a8ce5d275e8ab417c656 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.3E-48 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 Gene3D G3DSA:3.40.50.300 344 554 7.3E-20 T 13-10-2018 Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 Gene3D G3DSA:1.20.1560.10 8 332 6.0E-19 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 SUPERFAMILY SSF90123 24 326 5.49E-37 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 SUPERFAMILY SSF52540 345 554 1.09E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4498 1cc26d018fb8ea05e9a9b764e76740c4 587 Pfam PF06472 ABC transporter transmembrane region 2 5 277 8.3E-52 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Thivi_3505 68d799befab7000a0c707a3742b61dcc 108 Gene3D G3DSA:1.10.10.10 1 71 6.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3505 68d799befab7000a0c707a3742b61dcc 108 SUPERFAMILY SSF46955 2 60 6.41E-17 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_3505 68d799befab7000a0c707a3742b61dcc 108 Pfam PF02316 Mu DNA-binding domain 9 59 7.2E-15 T 13-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Thivi_0389 b55aa1d650f397a70299414d1c9a9683 168 Pfam PF05130 FlgN protein 15 156 6.1E-17 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Thivi_0389 b55aa1d650f397a70299414d1c9a9683 168 SUPERFAMILY SSF140566 14 139 5.36E-16 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Thivi_0389 b55aa1d650f397a70299414d1c9a9683 168 Gene3D G3DSA:1.20.58.300 11 139 5.1E-20 T 13-10-2018 Thivi_1094 352e5e0ac2e9f07f7b268cee553fea3b 141 Pfam PF04186 FxsA cytoplasmic membrane protein 8 108 1.7E-31 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Thivi_4496 602c4cb4f016c80cf92bf529bb2c2e15 204 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 63 186 2.2E-19 T 13-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 76 4.9E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 279 2.9E-101 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 SUPERFAMILY SSF52374 3 279 9.65E-107 T 13-10-2018 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 Gene3D G3DSA:3.40.50.620 1 178 4.1E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 Gene3D G3DSA:3.30.1300.10 179 285 2.3E-28 T 13-10-2018 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 41.61 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Thivi_0099 9a098099dd5e8220382e43a54cec7d82 285 Pfam PF02569 Pantoate-beta-alanine ligase 7 277 5.6E-102 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 Gene3D G3DSA:3.20.20.70 6 341 8.7E-118 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 SUPERFAMILY SSF51395 8 343 8.25E-91 T 13-10-2018 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 8 343 5.8E-112 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 87 106 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 Pfam PF01180 Dihydroorotate dehydrogenase 52 342 3.2E-79 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 298 318 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Thivi_3003 e847bb507a9faa4a881c0ba4077a2fd8 359 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 6 342 45.838 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Thivi_0589 1d251dd2c3c4844ae63f9a8bf466dafc 121 Pfam PF01850 PIN domain 3 109 1.6E-11 T 13-10-2018 IPR002716 PIN domain Thivi_0589 1d251dd2c3c4844ae63f9a8bf466dafc 121 SUPERFAMILY SSF88723 1 111 1.37E-17 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_0589 1d251dd2c3c4844ae63f9a8bf466dafc 121 Gene3D G3DSA:3.40.50.1010 1 115 1.3E-16 T 13-10-2018 Thivi_4519 e8fbb9d0ac76ae68fde2fad9691238ef 198 Gene3D G3DSA:3.30.70.2940 5 88 1.7E-8 T 13-10-2018 Thivi_4519 e8fbb9d0ac76ae68fde2fad9691238ef 198 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 8 176 1.8E-24 T 13-10-2018 IPR019117 CRISPR-associated protein, Cmr3 Thivi_1795 5e0e1c7ab26641d14a0070f1383eaefa 224 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 223 42.653 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Thivi_1795 5e0e1c7ab26641d14a0070f1383eaefa 224 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.8E-90 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Thivi_1795 5e0e1c7ab26641d14a0070f1383eaefa 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 77 208 5.6E-43 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 SMART SM01101 8 251 1.6E-50 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 SUPERFAMILY SSF117987 93 251 1.54E-23 T 13-10-2018 Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 Pfam PF08798 CRISPR associated protein 29 251 1.1E-43 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 SUPERFAMILY SSF117987 29 78 2.12E-6 T 13-10-2018 Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 17 112 1.1E-12 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_0461 163b24899fc5f05b02b3040de17ba72d 255 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 140 251 3.8E-17 T 13-10-2018 IPR010179 CRISPR-associated protein Cse3 Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 9.5E-117 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 Pfam PF00460 Flagella basal body rod protein 5 35 5.0E-13 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 2.3E-25 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 SUPERFAMILY SSF117143 92 222 6.41E-36 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 6.2E-44 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0400 d9e06923d62ba326f3eb179f2e7026e1 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 4.5E-34 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Thivi_0032 c42b707355518e767ee44419aea53ac8 229 SMART SM00448 2 112 8.5E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0032 c42b707355518e767ee44419aea53ac8 229 Pfam PF00072 Response regulator receiver domain 4 112 6.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0032 c42b707355518e767ee44419aea53ac8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 2.0E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0032 c42b707355518e767ee44419aea53ac8 229 Gene3D G3DSA:3.40.50.2300 1 118 1.8E-34 T 13-10-2018 Thivi_0032 c42b707355518e767ee44419aea53ac8 229 Gene3D G3DSA:1.10.10.10 119 229 9.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0032 c42b707355518e767ee44419aea53ac8 229 SMART SM00862 150 226 5.2E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_0032 c42b707355518e767ee44419aea53ac8 229 SUPERFAMILY SSF52172 1 187 9.82E-40 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3943 8e22f7565b2dfe62c3aac81ea28f4c83 197 Pfam PF04264 YceI-like domain 23 190 6.5E-13 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thivi_3943 8e22f7565b2dfe62c3aac81ea28f4c83 197 PIRSF PIRSF029811 1 193 5.3E-63 T 13-10-2018 IPR027016 Uncharacterised protein with YceI domain Thivi_3943 8e22f7565b2dfe62c3aac81ea28f4c83 197 SUPERFAMILY SSF101874 21 192 9.81E-20 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Thivi_3943 8e22f7565b2dfe62c3aac81ea28f4c83 197 SMART SM00867 22 191 1.6E-14 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thivi_3943 8e22f7565b2dfe62c3aac81ea28f4c83 197 Gene3D G3DSA:2.40.128.110 19 194 2.2E-49 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Thivi_0844 61ecf05a76c2a67a9e786796f212d4ac 373 Pfam PF02885 Glycosyl transferase family, helical bundle domain 17 80 1.2E-9 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_0844 61ecf05a76c2a67a9e786796f212d4ac 373 Gene3D G3DSA:3.40.1030.10 87 373 2.7E-46 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_0844 61ecf05a76c2a67a9e786796f212d4ac 373 SUPERFAMILY SSF47648 14 81 8.77E-12 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_0844 61ecf05a76c2a67a9e786796f212d4ac 373 Gene3D G3DSA:1.20.970.10 13 82 1.2E-16 T 13-10-2018 Thivi_0844 61ecf05a76c2a67a9e786796f212d4ac 373 SUPERFAMILY SSF52418 91 371 1.96E-30 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Thivi_0304 7a8eccf8a2d96ad3f529dd3c8cee22ba 98 Gene3D G3DSA:2.40.10.220 1 98 2.7E-8 T 13-10-2018 Thivi_0304 7a8eccf8a2d96ad3f529dd3c8cee22ba 98 SUPERFAMILY SSF141371 5 84 1.94E-9 T 13-10-2018 Thivi_0304 7a8eccf8a2d96ad3f529dd3c8cee22ba 98 Pfam PF07238 PilZ domain 7 96 7.0E-12 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_2586 d36091e5b622b2baa500c6532a7f65fe 84 Gene3D G3DSA:3.10.20.30 1 84 8.1E-25 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2586 d36091e5b622b2baa500c6532a7f65fe 84 Pfam PF02597 ThiS family 4 84 6.7E-20 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Thivi_2586 d36091e5b622b2baa500c6532a7f65fe 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 84 1.0E-24 T 13-10-2018 Thivi_2586 d36091e5b622b2baa500c6532a7f65fe 84 SUPERFAMILY SSF54285 1 82 1.83E-21 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_1060 92d74cb16512e9e6df3acacebd263cee 58 SUPERFAMILY SSF54786 2 57 9.02E-9 T 13-10-2018 Thivi_1060 92d74cb16512e9e6df3acacebd263cee 58 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 56 1.3E-8 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Thivi_1278 e0acf150a96e02f372edcee45f746db7 703 Pfam PF13632 Glycosyl transferase family group 2 201 394 6.9E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_1278 e0acf150a96e02f372edcee45f746db7 703 SUPERFAMILY SSF53448 103 409 4.08E-29 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1278 e0acf150a96e02f372edcee45f746db7 703 Gene3D G3DSA:3.90.550.10 93 330 1.8E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3164 a8cb170c2b7d5cc75fb50d0e5b31348a 246 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 246 32.808 T 13-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Thivi_3164 a8cb170c2b7d5cc75fb50d0e5b31348a 246 SUPERFAMILY SSF53167 4 243 5.34E-72 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Thivi_3164 a8cb170c2b7d5cc75fb50d0e5b31348a 246 Gene3D G3DSA:3.40.50.1580 2 246 1.1E-72 T 13-10-2018 Thivi_3164 a8cb170c2b7d5cc75fb50d0e5b31348a 246 Pfam PF01048 Phosphorylase superfamily 4 242 7.3E-40 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 Gene3D G3DSA:3.40.50.1000 1 173 2.6E-53 T 13-10-2018 IPR023214 HAD superfamily Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 PIRSF PIRSF006118 1 173 8.2E-71 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 SUPERFAMILY SSF56784 7 167 9.06E-43 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 11 162 2.3E-52 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 12 126 3.8E-13 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Thivi_2230 da814710a2e02672e5b6a4a751dc7a52 173 Pfam PF08282 haloacid dehalogenase-like hydrolase 71 143 1.2E-8 T 13-10-2018 Thivi_1401 45793af4658c1a3439bea66f34def605 410 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 15 408 4.7E-129 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Thivi_1401 45793af4658c1a3439bea66f34def605 410 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 8 410 24.018 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Thivi_1401 45793af4658c1a3439bea66f34def605 410 Pfam PF03616 Sodium/glutamate symporter 11 379 9.2E-113 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Thivi_4521 efae846f70cd3c6367a2c581c1599c38 329 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 10 178 4.1E-14 T 13-10-2018 IPR007522 CRISPR-associated protein TM1795 Thivi_4521 efae846f70cd3c6367a2c581c1599c38 329 Pfam PF03787 RAMP superfamily 8 176 3.9E-8 T 13-10-2018 IPR005537 CRISPR type III-associated RAMP protein Thivi_4102 c18fc9e04b2700eab3e9bcfc044c0c96 276 SUPERFAMILY SSF56317 1 270 8.5E-76 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_4102 c18fc9e04b2700eab3e9bcfc044c0c96 276 Pfam PF00795 Carbon-nitrogen hydrolase 7 256 2.7E-51 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Thivi_4102 c18fc9e04b2700eab3e9bcfc044c0c96 276 Gene3D G3DSA:3.60.110.10 5 274 8.6E-89 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_4102 c18fc9e04b2700eab3e9bcfc044c0c96 276 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 155 175 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 58 81 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 SUPERFAMILY SSF63411 24 231 9.5E-62 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 Pfam PF00675 Insulinase (Peptidase family M16) 44 183 3.9E-24 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 Pfam PF05193 Peptidase M16 inactive domain 194 373 4.4E-27 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 SUPERFAMILY SSF63411 247 442 1.45E-36 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 Gene3D G3DSA:3.30.830.10 246 442 1.7E-55 T 13-10-2018 Thivi_2999 13f827da9fb1a11c1cf80e176293a024 462 Gene3D G3DSA:3.30.830.10 23 244 3.3E-78 T 13-10-2018 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 150 223 1.3E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 Gene3D G3DSA:1.10.760.10 54 134 4.4E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 Pfam PF00034 Cytochrome c 56 134 5.9E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 Gene3D G3DSA:1.10.760.10 146 226 5.4E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 SUPERFAMILY SSF46626 155 230 1.72E-13 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2459 7d00fc025ffc7487159025226b06b94e 288 SUPERFAMILY SSF46626 48 134 4.5E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0525 8aed920c04dbe22adf4e0920e6ad41f2 119 SUPERFAMILY SSF69754 3 96 1.16E-7 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Thivi_0525 8aed920c04dbe22adf4e0920e6ad41f2 119 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 98 8.2E-7 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Thivi_0525 8aed920c04dbe22adf4e0920e6ad41f2 119 Gene3D G3DSA:3.30.160.100 1 101 2.8E-5 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Thivi_2165 d5fd919923eb34af3821657ddd3b5dba 227 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 13 218 5.4E-34 T 13-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Thivi_2165 d5fd919923eb34af3821657ddd3b5dba 227 Gene3D G3DSA:3.60.160.10 3 225 4.4E-62 T 13-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Thivi_2165 d5fd919923eb34af3821657ddd3b5dba 227 Pfam PF01987 Mitochondrial biogenesis AIM24 4 217 3.9E-52 T 13-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Thivi_2165 d5fd919923eb34af3821657ddd3b5dba 227 SUPERFAMILY SSF51219 3 219 2.62E-53 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Thivi_3776 72c7dd58970311a3fbdda88f0a0391c0 278 SUPERFAMILY SSF69593 32 224 1.15E-25 T 13-10-2018 Thivi_3776 72c7dd58970311a3fbdda88f0a0391c0 278 Pfam PF01553 Acyltransferase 65 176 4.8E-16 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_3776 72c7dd58970311a3fbdda88f0a0391c0 278 SMART SM00563 68 179 3.9E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_4391 b4c23853b610ab3133c41259d8040f94 254 SUPERFAMILY SSF52540 33 220 2.76E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4391 b4c23853b610ab3133c41259d8040f94 254 Gene3D G3DSA:3.40.50.300 18 162 2.7E-8 T 13-10-2018 Thivi_4391 b4c23853b610ab3133c41259d8040f94 254 Pfam PF13401 AAA domain 33 139 1.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1959 3aaf67f83da16b526630e7703ec2daea 111 SUPERFAMILY SSF50037 40 106 3.66E-11 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Thivi_1959 3aaf67f83da16b526630e7703ec2daea 111 SMART SM00899 38 108 4.0E-11 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_1959 3aaf67f83da16b526630e7703ec2daea 111 Pfam PF04023 FeoA domain 39 107 8.5E-16 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_1959 3aaf67f83da16b526630e7703ec2daea 111 Gene3D G3DSA:2.30.30.90 37 110 8.1E-19 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Thivi_4113 2424b00966a460a2294eb99bf24f0d4d 102 Gene3D G3DSA:3.30.750.24 1 93 2.3E-13 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_4113 2424b00966a460a2294eb99bf24f0d4d 102 Pfam PF13466 STAS domain 10 87 6.4E-14 T 13-10-2018 IPR002645 STAS domain Thivi_4113 2424b00966a460a2294eb99bf24f0d4d 102 SUPERFAMILY SSF52091 3 93 2.16E-14 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_4592 a88f9a576db9b2697f1f331329f3592f 407 SUPERFAMILY SSF109604 155 324 1.68E-31 T 13-10-2018 Thivi_4592 a88f9a576db9b2697f1f331329f3592f 407 Pfam PF11871 Domain of unknown function (DUF3391) 2 131 7.8E-34 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 Thivi_4592 a88f9a576db9b2697f1f331329f3592f 407 Gene3D G3DSA:1.10.3210.10 16 325 2.0E-73 T 13-10-2018 Thivi_4592 a88f9a576db9b2697f1f331329f3592f 407 Pfam PF01966 HD domain 162 284 1.2E-16 T 13-10-2018 IPR006674 HD domain Thivi_4592 a88f9a576db9b2697f1f331329f3592f 407 SMART SM00471 158 294 2.2E-11 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_4053 7f8a59aaa269681a49fb9ecdf8c37636 304 Gene3D G3DSA:3.90.550.10 1 237 2.5E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4053 7f8a59aaa269681a49fb9ecdf8c37636 304 Pfam PF00535 Glycosyl transferase family 2 4 183 1.7E-16 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4053 7f8a59aaa269681a49fb9ecdf8c37636 304 SUPERFAMILY SSF53448 3 270 4.31E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 Gene3D G3DSA:3.30.950.10 137 239 2.2E-14 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 SUPERFAMILY SSF53790 3 237 8.24E-50 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 PIRSF PIRSF036427 2 242 8.9E-68 T 13-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 220 7.5E-45 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 Gene3D G3DSA:3.40.1010.10 4 135 9.8E-32 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Thivi_1682 21ee9e49c584a2d815ffa12dcb8fc86a 242 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 236 2.5E-62 T 13-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Thivi_0114 88e0b7b7154802fd6fe3a20210c22981 305 Gene3D G3DSA:3.40.50.720 1 291 2.7E-102 T 13-10-2018 Thivi_0114 88e0b7b7154802fd6fe3a20210c22981 305 SUPERFAMILY SSF51735 11 290 2.22E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0253 c7bd39599bda12284f2dbdba1d08c297 190 Pfam PF11086 Protein of unknown function (DUF2878) 5 159 1.1E-48 T 13-10-2018 IPR021306 Protein of unknown function DUF2878 Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 Gene3D G3DSA:3.30.750.80 79 181 5.8E-33 T 13-10-2018 Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 SUPERFAMILY SSF53335 84 391 1.49E-70 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 Gene3D G3DSA:3.40.50.150 183 396 3.4E-70 T 13-10-2018 Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 351 1.1E-16 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 SUPERFAMILY SSF88697 5 75 3.48E-12 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_0510 f96fa25666e54100da7b8149fb85c1db 398 Gene3D G3DSA:2.30.130.10 5 75 2.4E-20 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 PIRSF PIRSF001563 1 427 5.2E-105 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 419 1.3E-92 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 Gene3D G3DSA:3.90.190.20 289 425 9.1E-31 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 SUPERFAMILY SSF53623 6 286 6.41E-84 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 Pfam PF08245 Mur ligase middle domain 49 263 3.7E-10 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 Gene3D G3DSA:3.40.1190.10 1 288 7.6E-89 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Thivi_0914 f79e2d066ad608e2242c9f1eff231331 429 SUPERFAMILY SSF53244 288 421 4.94E-25 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Thivi_0212 d3a3d2c3942041457991bada6006a025 331 Pfam PF01882 Protein of unknown function DUF58 56 140 1.1E-21 T 13-10-2018 IPR002881 Domain of unknown function DUF58 Thivi_3377 5ea5df874979518d044af1eb979f3656 221 SUPERFAMILY SSF52540 19 204 1.41E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3377 5ea5df874979518d044af1eb979f3656 221 Gene3D G3DSA:3.40.50.300 4 202 4.0E-50 T 13-10-2018 Thivi_3377 5ea5df874979518d044af1eb979f3656 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.926 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Thivi_3377 5ea5df874979518d044af1eb979f3656 221 Pfam PF01926 50S ribosome-binding GTPase 29 147 3.6E-19 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_3377 5ea5df874979518d044af1eb979f3656 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 8.0E-69 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Thivi_1163 18379ff24c6d333d5d271734317a316b 100 Gene3D G3DSA:3.30.1420.10 6 36 2.3E-8 T 13-10-2018 Thivi_1163 18379ff24c6d333d5d271734317a316b 100 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 100 5.6E-22 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1163 18379ff24c6d333d5d271734317a316b 100 SUPERFAMILY SSF69721 5 100 4.05E-30 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_1163 18379ff24c6d333d5d271734317a316b 100 Pfam PF04358 DsrC like protein 6 100 1.4E-24 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_1163 18379ff24c6d333d5d271734317a316b 100 Gene3D G3DSA:1.10.10.370 37 100 3.5E-19 T 13-10-2018 Thivi_1163 18379ff24c6d333d5d271734317a316b 100 PIRSF PIRSF006223 1 100 2.4E-22 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 3.0E-202 T 13-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 Gene3D G3DSA:3.20.20.70 1 354 1.3E-152 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.0E-96 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 PIRSF PIRSF001359 1 329 1.8E-82 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 5.2E-93 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 SUPERFAMILY SSF51569 3 328 8.35E-108 T 13-10-2018 Thivi_2341 c0ff4309076161fa45e7ce9d46f0f773 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 Gene3D G3DSA:3.40.50.2000 25 488 6.1E-203 T 13-10-2018 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 Gene3D G3DSA:3.40.50.2000 489 810 2.0E-141 T 13-10-2018 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 26 824 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 670 682 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 PIRSF PIRSF000460 11 832 4.3E-234 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 Pfam PF00343 Carbohydrate phosphorylase 114 824 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_3657 fbde591732fbfd4ba5d74aa1c7b167c2 832 SUPERFAMILY SSF53756 21 830 0.0 T 13-10-2018 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 218 1.0E-46 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 SUPERFAMILY SSF53681 1 111 9.16E-31 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 Gene3D G3DSA:3.40.50.1860 4 218 1.3E-60 T 13-10-2018 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 Gene3D G3DSA:3.40.50.1860 105 212 1.3E-60 T 13-10-2018 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 227 1.2E-39 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Thivi_4097 77c351e7c14a528a3854593346bf1e86 232 SUPERFAMILY SSF53681 116 225 2.13E-16 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Thivi_1500 202ffecb86453edb2efdfdc0fb3fcbbf 189 SUPERFAMILY SSF51306 74 189 5.23E-21 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Thivi_1500 202ffecb86453edb2efdfdc0fb3fcbbf 189 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 71 187 4.8E-14 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Thivi_1500 202ffecb86453edb2efdfdc0fb3fcbbf 189 Pfam PF10502 Signal peptidase, peptidase S26 101 188 7.6E-12 T 13-10-2018 IPR019533 Peptidase S26 Thivi_1500 202ffecb86453edb2efdfdc0fb3fcbbf 189 Gene3D G3DSA:2.10.109.10 62 189 2.1E-12 T 13-10-2018 Thivi_0384 02de2b3df71afa1b9e841fc583939784 160 Gene3D G3DSA:2.30.30.40 18 143 1.5E-41 T 13-10-2018 Thivi_0384 02de2b3df71afa1b9e841fc583939784 160 SUPERFAMILY SSF50341 15 154 2.88E-39 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0384 02de2b3df71afa1b9e841fc583939784 160 Pfam PF01584 CheW-like domain 17 152 6.8E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0384 02de2b3df71afa1b9e841fc583939784 160 SMART SM00260 12 149 9.2E-38 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_0384 02de2b3df71afa1b9e841fc583939784 160 Gene3D G3DSA:2.40.50.180 35 144 1.5E-41 T 13-10-2018 Thivi_3777 a9764d9c78626ae0b4419ec7d8418687 256 Gene3D G3DSA:3.40.630.30 20 160 5.8E-28 T 13-10-2018 Thivi_3777 a9764d9c78626ae0b4419ec7d8418687 256 Pfam PF13444 Acetyltransferase (GNAT) domain 35 134 4.2E-32 T 13-10-2018 Thivi_3777 a9764d9c78626ae0b4419ec7d8418687 256 SUPERFAMILY SSF55729 21 225 1.77E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_0390 79859944ec24e24d420d3902f5c224cb 101 SUPERFAMILY SSF101498 23 97 2.75E-12 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Thivi_0390 79859944ec24e24d420d3902f5c224cb 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 94 1.8E-12 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Thivi_0390 79859944ec24e24d420d3902f5c224cb 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 23 97 3.4E-15 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Thivi_1969 aa6bcc6aa4a0a0378d3417e1b2020164 188 Pfam PF01184 GPR1/FUN34/yaaH family 3 172 6.4E-33 T 13-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 Gene3D G3DSA:1.10.443.10 214 386 5.7E-22 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 Gene3D G3DSA:3.30.160.390 15 112 2.2E-5 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 Gene3D G3DSA:1.10.150.130 113 212 3.3E-14 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 SUPERFAMILY SSF56349 108 395 3.83E-57 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 Pfam PF00589 Phage integrase family 218 374 9.2E-17 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_1592 b9cbbc0b3e6800b8cc0c2324996d7259 422 Pfam PF13356 Arm DNA-binding domain 11 96 2.8E-7 T 13-10-2018 IPR025166 Integrase, DNA-binding domain Thivi_0575 73b98be5f037136f0b1739196adf6eee 166 Pfam PF05565 Siphovirus Gp157 6 165 5.0E-47 T 13-10-2018 IPR008840 Siphovirus Gp157 Thivi_0433 70be9461c9636cb373fa76db2935ce98 155 Gene3D G3DSA:3.90.1570.10 17 148 4.1E-17 T 13-10-2018 Thivi_0433 70be9461c9636cb373fa76db2935ce98 155 SUPERFAMILY SSF52980 21 134 5.25E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0433 70be9461c9636cb373fa76db2935ce98 155 Pfam PF05685 Putative restriction endonuclease 23 134 1.8E-14 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_4160 27bb93171a81f60cd53b7240497ef47d 134 SUPERFAMILY SSF53850 18 125 1.93E-10 T 13-10-2018 Thivi_4160 27bb93171a81f60cd53b7240497ef47d 134 Gene3D G3DSA:3.40.190.10 20 133 1.8E-7 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 Pfam PF02384 N-6 DNA Methylase 291 578 1.8E-32 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 Gene3D G3DSA:3.40.50.150 287 621 2.2E-65 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 Gene3D G3DSA:3.90.1570.30 8 155 7.1E-7 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 38 153 2.7E-16 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 SUPERFAMILY SSF53335 181 565 7.78E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 436 442 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 486 510 1.6E-19 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 326 1.6E-19 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 334 348 1.6E-19 T 13-10-2018 Thivi_0913 91724e9da8ae018319d5722ef02f6fbd 736 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 433 445 1.6E-19 T 13-10-2018 Thivi_2153 50146d0783fe8a07ce393a19fde0e5de 356 Pfam PF01594 AI-2E family transporter 19 344 2.3E-63 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Thivi_3440 1c21408c58a20af936bac048d39c6d5d 352 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 10 318 4.4E-112 T 13-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit Thivi_3440 1c21408c58a20af936bac048d39c6d5d 352 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 10 307 4.4E-114 T 13-10-2018 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 SMART SM01130 1 289 3.3E-142 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 6.1E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 6.1E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 6.1E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 6.1E-34 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 Gene3D G3DSA:3.20.20.70 1 291 3.1E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 Pfam PF00701 Dihydrodipicolinate synthetase family 2 284 3.2E-106 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 SUPERFAMILY SSF51569 2 286 1.78E-101 T 13-10-2018 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 PIRSF PIRSF001365 1 290 4.5E-93 T 13-10-2018 IPR002220 DapA-like GO:0016829 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 283 4.8E-110 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_3926 c21e34f398d41c16b7a370fe53a025cc 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 66.152 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 SUPERFAMILY SSF48452 31 210 6.26E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 Pfam PF13181 Tetratricopeptide repeat 150 179 0.008 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 12 251 1.3E-54 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Thivi_2729 478b2e77e5222129110588fad83b4da5 259 SMART SM00028 147 180 0.012 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 SMART SM00028 43 76 32.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 SMART SM00028 77 110 0.11 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 Pfam PF07719 Tetratricopeptide repeat 77 110 2.2E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 Thivi_2729 478b2e77e5222129110588fad83b4da5 259 Gene3D G3DSA:1.25.40.10 38 259 3.6E-45 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0084 6657d03d9cf7e39775039f420ca90fa7 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.8E-11 T 13-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Thivi_0084 6657d03d9cf7e39775039f420ca90fa7 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 1.1E-11 T 13-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 Thivi_3247 3fcd91c3e983813bf6db0043707260cc 153 Gene3D G3DSA:3.30.300.20 9 140 3.2E-14 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_3247 3fcd91c3e983813bf6db0043707260cc 153 SUPERFAMILY SSF82784 18 141 6.41E-16 T 13-10-2018 IPR036102 OsmC/Ohr superfamily Thivi_3247 3fcd91c3e983813bf6db0043707260cc 153 Pfam PF02566 OsmC-like protein 40 139 8.9E-7 T 13-10-2018 IPR003718 OsmC/Ohr family Thivi_0443 e53f6ca6b1d34773dd8f859219ae347e 204 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 202 3.9E-66 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Thivi_0443 e53f6ca6b1d34773dd8f859219ae347e 204 Pfam PF03006 Haemolysin-III related 5 197 2.2E-41 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Thivi_0362 7c224b5b78a2650e5ce6d666c5b67b4b 145 Pfam PF02050 Flagellar FliJ protein 21 135 9.3E-12 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Thivi_2041 158d6e77b8b4554c99ce3f0563a67e4b 101 Pfam PF01909 Nucleotidyltransferase domain 14 84 7.1E-8 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Thivi_2041 158d6e77b8b4554c99ce3f0563a67e4b 101 SUPERFAMILY SSF81301 5 94 1.09E-14 T 13-10-2018 Thivi_2041 158d6e77b8b4554c99ce3f0563a67e4b 101 Gene3D G3DSA:3.30.460.10 2 95 1.6E-18 T 13-10-2018 Thivi_0291 c5258d460c968e4fa42a4a079fce29c2 229 Pfam PF05685 Putative restriction endonuclease 43 157 3.4E-20 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_0291 c5258d460c968e4fa42a4a079fce29c2 229 Gene3D G3DSA:3.90.1570.10 41 178 4.1E-12 T 13-10-2018 Thivi_0291 c5258d460c968e4fa42a4a079fce29c2 229 SUPERFAMILY SSF52980 6 168 2.09E-32 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0426 d7141f5bd4279d74e69d8bcc0119e2ed 178 SUPERFAMILY SSF55729 12 156 2.28E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_0426 d7141f5bd4279d74e69d8bcc0119e2ed 178 Gene3D G3DSA:3.40.630.30 1 153 2.5E-9 T 13-10-2018 Thivi_0426 d7141f5bd4279d74e69d8bcc0119e2ed 178 Pfam PF13673 Acetyltransferase (GNAT) domain 50 145 1.7E-5 T 13-10-2018 IPR000182 GNAT domain Thivi_3424 1cb15ebb7cc0c268179577287da22a17 254 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3424 1cb15ebb7cc0c268179577287da22a17 254 Gene3D G3DSA:3.40.50.300 38 231 1.1E-44 T 13-10-2018 Thivi_3424 1cb15ebb7cc0c268179577287da22a17 254 SMART SM00382 47 246 3.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3424 1cb15ebb7cc0c268179577287da22a17 254 SUPERFAMILY SSF52540 42 226 5.94E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3424 1cb15ebb7cc0c268179577287da22a17 254 Pfam PF00005 ABC transporter 42 194 3.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 SUPERFAMILY SSF53383 25 425 6.26E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 Gene3D G3DSA:3.90.1010.10 460 607 2.0E-44 T 13-10-2018 Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 Pfam PF00266 Aminotransferase class-V 44 415 3.4E-138 T 13-10-2018 IPR000192 Aminotransferase class V domain Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 SUPERFAMILY SSF82649 471 606 1.41E-39 T 13-10-2018 Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 Gene3D G3DSA:3.40.640.10 55 315 4.0E-162 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 Pfam PF02657 Fe-S metabolism associated domain 480 601 4.2E-41 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 26 422 1.1E-162 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Thivi_1413 968bfeda38ecafd1a73fe0f3533522b0 615 Gene3D G3DSA:3.90.1150.10 27 417 4.0E-162 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 SUPERFAMILY SSF52540 155 340 1.18E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 Gene3D G3DSA:1.20.120.1380 128 339 1.3E-38 T 13-10-2018 Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 SMART SM00382 157 292 4.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 Pfam PF00448 SRP54-type protein, GTPase domain 161 343 3.7E-28 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 Gene3D G3DSA:3.40.50.300 154 337 1.3E-38 T 13-10-2018 Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 SMART SM00962 158 349 4.5E-16 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Thivi_0373 c5019d2576c283ce659707f1fec6499d 404 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 246 2.4E-55 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Thivi_2763 00a1b618b49b43e52c61c84bf461482f 242 SUPERFAMILY SSF53474 4 239 1.72E-23 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2763 00a1b618b49b43e52c61c84bf461482f 242 Gene3D G3DSA:3.40.50.1820 2 242 3.7E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2763 00a1b618b49b43e52c61c84bf461482f 242 Pfam PF00756 Putative esterase 69 206 9.2E-11 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Thivi_2141 0fb5b25e2de23d3d0f3fa0361ad96ad8 1440 SUPERFAMILY SSF50998 952 1419 9.58E-11 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Thivi_2141 0fb5b25e2de23d3d0f3fa0361ad96ad8 1440 Pfam PF05567 Neisseria PilC beta-propeller domain 965 1259 1.9E-51 T 13-10-2018 IPR008707 PilC beta-propeller domain Thivi_2141 0fb5b25e2de23d3d0f3fa0361ad96ad8 1440 Gene3D G3DSA:2.130.10.10 937 1201 1.5E-11 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 110 408 1.4E-72 T 13-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 SUPERFAMILY SSF143865 73 343 6.41E-67 T 13-10-2018 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 Gene3D G3DSA:1.20.58.340 220 331 1.3E-36 T 13-10-2018 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 Pfam PF01544 CorA-like Mg2+ transporter protein 110 404 2.3E-66 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 Gene3D G3DSA:1.20.58.340 332 408 2.9E-27 T 13-10-2018 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 SUPERFAMILY SSF144083 344 404 1.31E-18 T 13-10-2018 Thivi_3558 1c649324d2b407eec1ee08f48cc02628 408 Gene3D G3DSA:3.30.460.20 48 219 1.3E-38 T 13-10-2018 Thivi_1387 d81d4120cb09df794e4a2452541eff45 299 SUPERFAMILY SSF103515 42 222 9.94E-6 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Thivi_0483 3db45ac378794f392a3643e86d107655 273 Pfam PF01551 Peptidase family M23 172 265 1.9E-22 T 13-10-2018 IPR016047 Peptidase M23 Thivi_0483 3db45ac378794f392a3643e86d107655 273 SMART SM00257 46 90 3.6E-7 T 13-10-2018 IPR018392 LysM domain Thivi_0483 3db45ac378794f392a3643e86d107655 273 Pfam PF01476 LysM domain 47 85 7.7E-9 T 13-10-2018 IPR018392 LysM domain Thivi_0483 3db45ac378794f392a3643e86d107655 273 Gene3D G3DSA:3.10.350.10 44 90 1.6E-8 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_0483 3db45ac378794f392a3643e86d107655 273 SUPERFAMILY SSF51261 47 269 5.18E-36 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_0483 3db45ac378794f392a3643e86d107655 273 Gene3D G3DSA:2.70.70.10 134 270 9.4E-30 T 13-10-2018 IPR011055 Duplicated hybrid motif Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 SMART SM00316 37 120 9.3E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 Gene3D G3DSA:3.40.1260.20 401 507 2.4E-37 T 13-10-2018 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 Hamap MF_00970 Ribonuclease E [rne]. 1 1010 31.623 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 Pfam PF00575 S1 RNA binding domain 36 119 7.3E-11 T 13-10-2018 IPR003029 S1 domain GO:0003676 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 Pfam PF10150 Ribonuclease E/G family 122 391 2.0E-97 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.0E-164 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 Gene3D G3DSA:2.40.50.140 31 126 1.3E-28 T 13-10-2018 Thivi_2191 fc78bfebf24df659f0bb64bc50f9bb4d 1036 SUPERFAMILY SSF50249 40 126 1.21E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_1782 ccf51791ba96e95d33c43ee0b5e9aad9 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 3.6E-14 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thivi_1782 ccf51791ba96e95d33c43ee0b5e9aad9 99 Gene3D G3DSA:3.30.2310.20 1 96 1.2E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_2924 ba262dbb02103529d86c716686211949 177 SMART SM00471 29 137 1.9E-5 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_2924 ba262dbb02103529d86c716686211949 177 Gene3D G3DSA:1.10.3210.10 3 177 1.5E-55 T 13-10-2018 Thivi_2924 ba262dbb02103529d86c716686211949 177 Pfam PF13328 HD domain 12 143 3.8E-17 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_2924 ba262dbb02103529d86c716686211949 177 SUPERFAMILY SSF109604 2 171 6.28E-39 T 13-10-2018 Thivi_2455 3dcfdbae1489db7e99ec1671b8c80c0f 714 Gene3D G3DSA:3.40.50.410 528 706 7.4E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2455 3dcfdbae1489db7e99ec1671b8c80c0f 714 SMART SM00327 528 713 1.3E-5 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2455 3dcfdbae1489db7e99ec1671b8c80c0f 714 SUPERFAMILY SSF53300 529 712 3.56E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1317 94ed50ac985a248cb3f529c1df0f7f66 666 Gene3D G3DSA:2.170.130.10 35 154 2.3E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_1317 94ed50ac985a248cb3f529c1df0f7f66 666 Gene3D G3DSA:2.40.170.20 161 666 4.2E-51 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_1317 94ed50ac985a248cb3f529c1df0f7f66 666 SUPERFAMILY SSF56935 25 642 5.09E-92 T 13-10-2018 Thivi_1317 94ed50ac985a248cb3f529c1df0f7f66 666 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 145 1.6E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Thivi_1317 94ed50ac985a248cb3f529c1df0f7f66 666 Pfam PF00593 TonB dependent receptor 256 640 2.6E-28 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_1359 134d1daea86c60983f04bc16070492b5 367 SUPERFAMILY SSF52283 1 169 1.45E-49 T 13-10-2018 Thivi_1359 134d1daea86c60983f04bc16070492b5 367 Gene3D G3DSA:3.40.50.720 3 362 2.5E-132 T 13-10-2018 Thivi_1359 134d1daea86c60983f04bc16070492b5 367 SMART SM01003 4 137 1.3E-58 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Thivi_1359 134d1daea86c60983f04bc16070492b5 367 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 360 1.4E-59 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Thivi_1359 134d1daea86c60983f04bc16070492b5 367 SUPERFAMILY SSF51735 137 315 8.63E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1359 134d1daea86c60983f04bc16070492b5 367 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Thivi_1359 134d1daea86c60983f04bc16070492b5 367 SMART SM01002 146 310 1.9E-73 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Thivi_1359 134d1daea86c60983f04bc16070492b5 367 Gene3D G3DSA:3.40.50.720 137 317 2.5E-132 T 13-10-2018 Thivi_1359 134d1daea86c60983f04bc16070492b5 367 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.2E-40 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Thivi_2685 b1dec28b979b1d4c3acaa55782c896c7 315 Gene3D G3DSA:3.90.550.10 4 251 3.3E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2685 b1dec28b979b1d4c3acaa55782c896c7 315 Pfam PF00535 Glycosyl transferase family 2 18 204 8.4E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_2685 b1dec28b979b1d4c3acaa55782c896c7 315 SUPERFAMILY SSF53448 14 282 8.91E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3221 904194239c4a207168696e3ca0f0deb1 81 SUPERFAMILY SSF47598 9 57 1.73E-9 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_3221 904194239c4a207168696e3ca0f0deb1 81 Pfam PF01402 Ribbon-helix-helix protein, copG family 13 45 1.1E-4 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 Gene3D G3DSA:1.10.1200.80 281 354 2.6E-10 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 Pfam PF01207 Dihydrouridine synthase (Dus) 30 345 1.3E-96 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 20 345 4.1E-109 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 PIRSF PIRSF006621 18 356 8.2E-97 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 111 129 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 SUPERFAMILY SSF51395 27 346 2.2E-83 T 13-10-2018 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 18 349 47.487 T 13-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 Thivi_1110 cce18aa44eccfaad608ed2cc9dff8574 356 Gene3D G3DSA:3.20.20.70 24 262 9.7E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3306 60c0b0785c69488f80fc6f23fae47d6c 144 Gene3D G3DSA:3.40.50.12740 24 144 6.7E-47 T 13-10-2018 Thivi_3306 60c0b0785c69488f80fc6f23fae47d6c 144 Pfam PF00072 Response regulator receiver domain 27 139 1.3E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3306 60c0b0785c69488f80fc6f23fae47d6c 144 SUPERFAMILY SSF52172 25 143 3.7E-39 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3306 60c0b0785c69488f80fc6f23fae47d6c 144 SMART SM00448 25 138 8.7E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0083 516331749fa00a50195d38e389769304 574 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 570 35.937 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Thivi_0083 516331749fa00a50195d38e389769304 574 Pfam PF03814 Potassium-transporting ATPase A subunit 11 568 6.7E-244 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Thivi_0083 516331749fa00a50195d38e389769304 574 PIRSF PIRSF001294 1 572 1.6E-240 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Thivi_0083 516331749fa00a50195d38e389769304 574 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 570 1.1E-240 T 13-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Thivi_1076 2488eaeface5ce6220e17c372265dcb4 427 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 6 387 2.5E-70 T 13-10-2018 IPR010148 CRISPR-associated protein, CT1975 Thivi_1076 2488eaeface5ce6220e17c372265dcb4 427 Pfam PF09344 CT1975-like protein 8 405 2.2E-93 T 13-10-2018 IPR010148 CRISPR-associated protein, CT1975 Thivi_3927 7026d22adfe2bc49edc292031c2fe382 426 Gene3D G3DSA:3.30.310.170 306 426 2.1E-9 T 13-10-2018 Thivi_3927 7026d22adfe2bc49edc292031c2fe382 426 Pfam PF06804 NlpB/DapX lipoprotein 81 423 3.3E-42 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein Thivi_2970 3dd645ce61cb96d7a46ddbe4f4ec1cc2 321 Gene3D G3DSA:2.40.440.10 31 305 1.3E-83 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_2970 3dd645ce61cb96d7a46ddbe4f4ec1cc2 321 SUPERFAMILY SSF141523 104 241 1.83E-33 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_2970 3dd645ce61cb96d7a46ddbe4f4ec1cc2 321 Pfam PF03734 L,D-transpeptidase catalytic domain 108 241 1.3E-17 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_2701 07a661a9df12d72ab39d650f87739db8 576 Gene3D G3DSA:1.10.645.10 1 561 1.2E-271 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2701 07a661a9df12d72ab39d650f87739db8 576 SUPERFAMILY SSF56762 1 561 7.85E-174 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2701 07a661a9df12d72ab39d650f87739db8 576 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 552 561 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_2701 07a661a9df12d72ab39d650f87739db8 576 Pfam PF00374 Nickel-dependent hydrogenase 39 561 2.0E-235 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_2701 07a661a9df12d72ab39d650f87739db8 576 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_1374 45364dd4c58774c85ba647c7d27bb49f 109 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 30 78 2.0E-8 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Thivi_2773 f542d83b8e2a7cff8940701f00ea3dfc 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 34 220 4.8E-39 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_2773 f542d83b8e2a7cff8940701f00ea3dfc 225 PIRSF PIRSF000709 32 223 1.1E-8 T 13-10-2018 Thivi_2773 f542d83b8e2a7cff8940701f00ea3dfc 225 Gene3D G3DSA:3.40.50.1240 27 222 3.3E-41 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_2773 f542d83b8e2a7cff8940701f00ea3dfc 225 SMART SM00855 31 182 6.4E-11 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_2773 f542d83b8e2a7cff8940701f00ea3dfc 225 SUPERFAMILY SSF53254 30 221 2.1E-42 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 7.1E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 SMART SM00418 6 88 5.2E-28 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 Gene3D G3DSA:1.10.10.10 2 89 1.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 9.3E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 9.3E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 9.3E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 9.3E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Thivi_1666 7693777707f78abe9ec1c1654f6f863e 109 SUPERFAMILY SSF46785 4 86 5.64E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1517 30332c90d1d839b6147c33a85b936627 256 SUPERFAMILY SSF81606 2 212 1.03E-29 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1517 30332c90d1d839b6147c33a85b936627 256 SMART SM00331 3 214 0.0016 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1517 30332c90d1d839b6147c33a85b936627 256 Gene3D G3DSA:3.60.40.10 1 214 3.1E-28 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1517 30332c90d1d839b6147c33a85b936627 256 SMART SM00332 5 212 0.0012 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_1517 30332c90d1d839b6147c33a85b936627 256 Pfam PF13672 Protein phosphatase 2C 8 130 1.1E-7 T 13-10-2018 Thivi_2210 44b7c3a82131ba8ee61bc0a805663d04 187 Pfam PF07238 PilZ domain 97 172 1.6E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_0468 6c256c6d181dbbaf74323d495bee6f75 124 SUPERFAMILY SSF110069 5 121 5.1E-48 T 13-10-2018 IPR036767 ApaG domain superfamily Thivi_0468 6c256c6d181dbbaf74323d495bee6f75 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 31.073 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG Thivi_0468 6c256c6d181dbbaf74323d495bee6f75 124 Gene3D G3DSA:2.60.40.1470 1 124 9.2E-48 T 13-10-2018 IPR036767 ApaG domain superfamily Thivi_0468 6c256c6d181dbbaf74323d495bee6f75 124 Pfam PF04379 ApaG domain 17 101 1.2E-36 T 13-10-2018 IPR007474 ApaG domain Thivi_3135 ce734458ea4d39230c3f156d5a1330e3 347 SUPERFAMILY SSF52540 22 161 5.34E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3135 ce734458ea4d39230c3f156d5a1330e3 347 Pfam PF07728 AAA domain (dynein-related subfamily) 24 154 4.3E-10 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_3135 ce734458ea4d39230c3f156d5a1330e3 347 SMART SM00382 21 165 4.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3135 ce734458ea4d39230c3f156d5a1330e3 347 Gene3D G3DSA:3.40.50.300 10 164 9.1E-24 T 13-10-2018 Thivi_0920 2d5b2293a481ca15121b42c1a5a52ac1 951 Gene3D G3DSA:1.20.58.2200 888 951 1.7E-22 T 13-10-2018 IPR038440 FimV, C-terminal domain superfamily Thivi_0920 2d5b2293a481ca15121b42c1a5a52ac1 951 SUPERFAMILY SSF48452 629 940 8.09E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0920 2d5b2293a481ca15121b42c1a5a52ac1 951 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 194 258 4.8E-12 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal Thivi_0920 2d5b2293a481ca15121b42c1a5a52ac1 951 Gene3D G3DSA:1.25.40.10 622 704 2.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0920 2d5b2293a481ca15121b42c1a5a52ac1 951 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 907 950 2.4E-19 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal Thivi_0667 a3a4e41ecdc33fbaf2cd513d584bdc5a 98 Gene3D G3DSA:2.20.130.30 25 97 1.8E-26 T 13-10-2018 Thivi_0667 a3a4e41ecdc33fbaf2cd513d584bdc5a 98 Pfam PF11191 Protein of unknown function (DUF2782) 22 97 4.9E-30 T 13-10-2018 IPR021357 Protein of unknown function DUF2782 Thivi_2904 bc59fb16aa6858af7a675e4eb311b8db 149 SUPERFAMILY SSF54690 3 149 1.01E-50 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Thivi_2904 bc59fb16aa6858af7a675e4eb311b8db 149 Gene3D G3DSA:3.90.1170.40 2 149 5.2E-52 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Thivi_2904 bc59fb16aa6858af7a675e4eb311b8db 149 Pfam PF02391 MoaE protein 6 120 2.3E-37 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Thivi_2895 7932704154965fa3fa3c6d331043a03a 269 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 257 1.6E-58 T 13-10-2018 IPR005226 UPF0014 family Thivi_2895 7932704154965fa3fa3c6d331043a03a 269 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 251 2.9E-86 T 13-10-2018 IPR005226 UPF0014 family Thivi_0232 b2769fab3a14664a41170ac843c6bc74 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 39.06 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 Thivi_0232 b2769fab3a14664a41170ac843c6bc74 422 Pfam PF04285 Protein of unknown function (DUF444) 4 420 2.5E-180 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 Thivi_0232 b2769fab3a14664a41170ac843c6bc74 422 SUPERFAMILY SSF53300 250 349 3.15E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1148 d74c499c0cc323da14e445bc725637f7 338 Hamap MF_01805 Segregation and condensation protein A [scpA]. 95 326 22.167 T 13-10-2018 IPR003768 Segregation and condensation protein A Thivi_1148 d74c499c0cc323da14e445bc725637f7 338 Pfam PF02616 Segregation and condensation protein ScpA 112 323 5.6E-28 T 13-10-2018 IPR003768 Segregation and condensation protein A Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 34.466 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.2E-78 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 SUPERFAMILY SSF55174 3 206 3.06E-70 T 13-10-2018 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 Pfam PF01479 S4 domain 96 143 7.5E-18 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 SMART SM01390 3 95 1.8E-44 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 Gene3D G3DSA:1.10.1050.10 6 206 3.6E-77 T 13-10-2018 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 Gene3D G3DSA:3.10.290.10 95 191 3.6E-77 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 SMART SM00363 96 160 2.3E-17 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4225 2178a90942a102d05a2b4fae47c16db8 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.4E-30 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Thivi_4278 82067060b1ecf39e987f0dbdefda9b3d 312 Pfam PF08668 HDOD domain 47 247 7.6E-44 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_4278 82067060b1ecf39e987f0dbdefda9b3d 312 SUPERFAMILY SSF109604 37 301 1.11E-56 T 13-10-2018 Thivi_4278 82067060b1ecf39e987f0dbdefda9b3d 312 Gene3D G3DSA:1.10.3210.10 22 312 5.9E-76 T 13-10-2018 Thivi_2168 2c26b92fa1bc7651b37ab6694ed16a32 388 SUPERFAMILY SSF53271 94 195 9.23E-6 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_2168 2c26b92fa1bc7651b37ab6694ed16a32 388 PIRSF PIRSF020967 2 374 2.1E-99 T 13-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 Thivi_2168 2c26b92fa1bc7651b37ab6694ed16a32 388 Pfam PF15609 Phosphoribosyl transferase 28 217 5.6E-57 T 13-10-2018 Thivi_2168 2c26b92fa1bc7651b37ab6694ed16a32 388 Pfam PF12500 TRSP domain C terminus to PRTase_2 269 358 1.2E-18 T 13-10-2018 IPR022537 TRSP domain Thivi_3178 33625797003d6d116eecc1ea062cddbc 286 Gene3D G3DSA:3.90.226.10 129 283 1.4E-11 T 13-10-2018 Thivi_3178 33625797003d6d116eecc1ea062cddbc 286 SUPERFAMILY SSF52096 147 282 1.19E-11 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Thivi_3972 c265f099437e03291deb685309528f8d 71 Gene3D G3DSA:3.30.160.250 2 70 8.7E-22 T 13-10-2018 Thivi_3972 c265f099437e03291deb685309528f8d 71 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 64 9.2E-16 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Thivi_3972 c265f099437e03291deb685309528f8d 71 SUPERFAMILY SSF143100 1 62 4.32E-22 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_1081 408284172cb6b251c1b6f95d99ca0568 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 154 1.3E-32 T 13-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane Thivi_2771 f1778e9e41cfc54884cf7306028e9574 163 Pfam PF13511 Domain of unknown function (DUF4124) 19 64 8.3E-6 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 Thivi_1607 72e560e029c8ef3bd47ff12c5c2cc3dc 89 Pfam PF10387 Protein of unknown function (DUF2442) 7 69 1.0E-12 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_1607 72e560e029c8ef3bd47ff12c5c2cc3dc 89 Gene3D G3DSA:3.30.2020.10 1 80 1.7E-5 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_1607 72e560e029c8ef3bd47ff12c5c2cc3dc 89 SUPERFAMILY SSF143880 1 80 9.42E-15 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_4208 1a4571b4b1352815df15c816465351fb 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.8E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.8E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.8E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.8E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.6E-48 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 Gene3D G3DSA:3.90.1170.10 1 137 4.3E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.5E-60 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.513 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4208 1a4571b4b1352815df15c816465351fb 137 SUPERFAMILY SSF54686 1 134 5.23E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Thivi_4101 5e34e817820f90db64fb35daaec4bde5 1373 Pfam PF13116 Protein of unknown function 573 853 1.1E-54 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 Thivi_4101 5e34e817820f90db64fb35daaec4bde5 1373 Pfam PF13502 AsmA-like C-terminal region 1096 1337 4.3E-45 T 13-10-2018 IPR032712 AsmA-like, C-terminal Thivi_4101 5e34e817820f90db64fb35daaec4bde5 1373 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 243 1341 1.4E-180 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 Thivi_0364 0832655d4a52dac912c875fee0e4485f 189 Pfam PF03748 Flagellar basal body-associated protein FliL 89 189 1.6E-20 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Thivi_0571 e8ff8c71d78e6e23dd896fa14984fbbb 323 TIGRFAM TIGR03299 LGT_TIGR03299: phage/plasmid-like protein TIGR03299 6 318 1.1E-109 T 13-10-2018 IPR017686 Phage/plasmid-like protein Thivi_0571 e8ff8c71d78e6e23dd896fa14984fbbb 323 Pfam PF06067 Domain of unknown function (DUF932) 77 303 9.2E-75 T 13-10-2018 IPR026325 Protein of unknown function DUF932 Thivi_3808 1cbace2ce8cc37051dce79c064119008 340 SUPERFAMILY SSF52540 54 194 6.98E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3808 1cbace2ce8cc37051dce79c064119008 340 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 317 3.3E-79 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Thivi_3808 1cbace2ce8cc37051dce79c064119008 340 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 327 39.407 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Thivi_3808 1cbace2ce8cc37051dce79c064119008 340 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 21 326 6.6E-105 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 Gene3D G3DSA:3.20.20.140 6 346 6.2E-112 T 13-10-2018 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 PIRSF PIRSF001237 3 348 2.9E-139 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 Pfam PF01979 Amidohydrolase family 14 313 1.7E-14 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 SUPERFAMILY SSF51556 5 345 9.95E-143 T 13-10-2018 IPR032466 Metal-dependent hydrolase Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 6 345 3.3E-136 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 Hamap MF_00219 Dihydroorotase [pyrC]. 5 346 47.478 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 ProSitePatterns PS00483 Dihydroorotase signature 2. 248 259 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_0236 faa7c62c887e4ba4fc4fcc79d51e0f6a 358 ProSitePatterns PS00482 Dihydroorotase signature 1. 14 22 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Thivi_1068 48a6c9a2852915d7d6c8c00ea4c684b6 175 PIRSF PIRSF004982 1 175 8.2E-47 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Thivi_1068 48a6c9a2852915d7d6c8c00ea4c684b6 175 Pfam PF03843 Outer membrane lipoprotein Slp family 15 163 4.4E-46 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Thivi_0812 81450666da41f196fc19a5d71db656ed 562 Gene3D G3DSA:1.10.287.110 80 134 2.3E-7 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_0812 81450666da41f196fc19a5d71db656ed 562 SUPERFAMILY SSF46565 81 128 6.67E-9 T 13-10-2018 IPR036869 Chaperone J-domain superfamily Thivi_4112 1f371f4f0ad206e9648943ab6cad19a9 122 Pfam PF00072 Response regulator receiver domain 5 116 2.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4112 1f371f4f0ad206e9648943ab6cad19a9 122 SMART SM00448 3 116 5.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4112 1f371f4f0ad206e9648943ab6cad19a9 122 SUPERFAMILY SSF52172 3 120 4.55E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_4112 1f371f4f0ad206e9648943ab6cad19a9 122 Gene3D G3DSA:3.40.50.12740 1 121 4.1E-37 T 13-10-2018 Thivi_4476 8fab82dfde01454bf173d00e39260ce2 282 SUPERFAMILY SSF53474 4 277 9.3E-81 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4476 8fab82dfde01454bf173d00e39260ce2 282 Pfam PF00756 Putative esterase 21 269 6.8E-55 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Thivi_4476 8fab82dfde01454bf173d00e39260ce2 282 Gene3D G3DSA:3.40.50.1820 2 279 1.9E-87 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4476 8fab82dfde01454bf173d00e39260ce2 282 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 276 7.1E-116 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 Gene3D G3DSA:1.20.58.100 452 566 3.8E-28 T 13-10-2018 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 Gene3D G3DSA:3.90.700.10 260 395 2.6E-121 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 SUPERFAMILY SSF56425 233 367 1.18E-30 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 Pfam PF00890 FAD binding domain 7 420 3.6E-80 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 40 49 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 Gene3D G3DSA:3.50.50.60 8 431 2.6E-121 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 SUPERFAMILY SSF51905 7 447 8.64E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 Pfam PF02910 Fumarate reductase flavoprotein C-term 480 627 2.9E-32 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 SUPERFAMILY SSF46977 471 623 3.79E-30 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Thivi_2777 911a340ec8cb7bc2280d050b695b9416 628 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 8 627 1.9E-192 T 13-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 17 118 7.3E-21 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 64 78 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 Pfam PF00825 Ribonuclease P 14 118 2.4E-26 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 25 106 7.0E-16 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 SUPERFAMILY SSF54211 14 119 4.55E-24 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 14 123 15.895 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Thivi_3005 326cd3646f6ef8f092ac1fb19c93f8e9 128 Gene3D G3DSA:3.30.230.10 11 124 2.6E-34 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thivi_1120 8f08971c8e1a90b339e1a0d23b4da410 333 Pfam PF01636 Phosphotransferase enzyme family 26 244 3.3E-28 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase Thivi_1120 8f08971c8e1a90b339e1a0d23b4da410 333 Gene3D G3DSA:3.90.1200.10 94 330 9.2E-72 T 13-10-2018 Thivi_1120 8f08971c8e1a90b339e1a0d23b4da410 333 Gene3D G3DSA:3.30.200.20 2 93 1.7E-20 T 13-10-2018 Thivi_1120 8f08971c8e1a90b339e1a0d23b4da410 333 SUPERFAMILY SSF56112 10 307 9.42E-51 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_0602 a5526def4992ba91d85262f57a83a2a4 190 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 11 85 1.2E-14 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 Thivi_0602 a5526def4992ba91d85262f57a83a2a4 190 SUPERFAMILY SSF89069 11 78 1.44E-12 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Thivi_0602 a5526def4992ba91d85262f57a83a2a4 190 Gene3D G3DSA:1.10.10.880 10 78 1.1E-13 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 Pfam PF00462 Glutaredoxin 4 60 1.6E-20 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 Gene3D G3DSA:3.40.30.10 1 83 1.2E-24 T 13-10-2018 Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 PRINTS PR00160 Glutaredoxin signature 4 22 1.1E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 PRINTS PR00160 Glutaredoxin signature 60 73 1.1E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 PRINTS PR00160 Glutaredoxin signature 46 59 1.1E-11 T 13-10-2018 IPR014025 Glutaredoxin subgroup Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.5E-33 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Thivi_0729 1baaa716d0907f54df6f74df8e9fdf0c 84 SUPERFAMILY SSF52833 1 83 4.03E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_4416 ec29808823d5fd9107c4511e2d864265 175 SUPERFAMILY SSF55846 4 156 8.88E-20 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_4416 ec29808823d5fd9107c4511e2d864265 175 Gene3D G3DSA:3.40.80.10 2 163 5.2E-24 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_4416 ec29808823d5fd9107c4511e2d864265 175 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 4 142 4.4E-6 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Thivi_0256 9adc2e7ef79a212b57066619124668ee 38 Pfam PF08173 Membrane bound YbgT-like protein 1 26 5.3E-14 T 13-10-2018 IPR012994 Membrane bound YbgT-like Thivi_0256 9adc2e7ef79a212b57066619124668ee 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 26 2.3E-14 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 Thivi_1085 316c48101e8df8ac53ecd426155ba8c0 441 SUPERFAMILY SSF101960 26 436 2.62E-98 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Thivi_1085 316c48101e8df8ac53ecd426155ba8c0 441 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 426 9.4E-79 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 Thivi_1085 316c48101e8df8ac53ecd426155ba8c0 441 Pfam PF01458 Uncharacterized protein family (UPF0051) 187 410 1.3E-68 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 356 425 3.4E-31 T 13-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 Gene3D G3DSA:3.50.50.60 149 282 9.6E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 SUPERFAMILY SSF51905 147 281 1.17E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 SUPERFAMILY SSF51905 36 351 6.29E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 Gene3D G3DSA:3.90.760.10 355 426 2.1E-28 T 13-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 36 148 9.7E-10 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 Gene3D G3DSA:3.50.50.60 36 348 9.6E-104 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_1725 b0fc22feb9c0edb2fbc355edaf882c5e 426 SUPERFAMILY SSF55424 355 425 1.59E-23 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 Gene3D G3DSA:3.20.20.60 1 417 1.6E-178 T 13-10-2018 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 PIRSF PIRSF001362 1 434 7.5E-217 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 Pfam PF00463 Isocitrate lyase family 12 256 4.1E-58 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 Pfam PF00463 Isocitrate lyase family 257 434 2.1E-48 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 6.0E-107 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 5.3E-87 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Thivi_3995 aebdd1168898966bdae92fe79640eb29 434 SUPERFAMILY SSF51621 3 417 2.78E-149 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Thivi_3249 779f607bc61280b0f57911fe83188d39 582 Pfam PF02026 RyR domain 362 427 4.9E-11 T 13-10-2018 IPR003032 Ryanodine receptor Ryr Reactome: R-HSA-2672351|Reactome: R-HSA-5578775 Thivi_3249 779f607bc61280b0f57911fe83188d39 582 Gene3D G3DSA:1.10.490.160 357 431 5.1E-9 T 13-10-2018 Thivi_0137 07ffe867f694477adec637b60ecb92d8 300 Pfam PF00535 Glycosyl transferase family 2 18 141 3.9E-30 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_0137 07ffe867f694477adec637b60ecb92d8 300 SUPERFAMILY SSF53448 15 250 3.64E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0137 07ffe867f694477adec637b60ecb92d8 300 Gene3D G3DSA:3.90.550.10 1 235 7.5E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1665 545eadb4de87dae17ec6eee1869855ad 80 SUPERFAMILY SSF52833 2 76 1.12E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1665 545eadb4de87dae17ec6eee1869855ad 80 Pfam PF13192 Thioredoxin domain 3 76 5.3E-25 T 13-10-2018 IPR012336 Thioredoxin-like fold Thivi_1665 545eadb4de87dae17ec6eee1869855ad 80 PIRSF PIRSF037031 1 78 4.6E-28 T 13-10-2018 IPR005243 Redox-active disulphide protein 2 Thivi_1665 545eadb4de87dae17ec6eee1869855ad 80 Gene3D G3DSA:3.40.30.10 1 76 2.0E-26 T 13-10-2018 Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 SUPERFAMILY SSF54862 64 213 1.16E-23 T 13-10-2018 Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 Gene3D G3DSA:3.30.70.20 140 223 2.8E-10 T 13-10-2018 Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 Pfam PF12838 4Fe-4S dicluster domain 150 200 1.6E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 Pfam PF12838 4Fe-4S dicluster domain 64 119 1.8E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 Gene3D G3DSA:3.30.70.20 60 136 9.0E-11 T 13-10-2018 Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4244 b241cfb69a4878a79110c6ad9c382e63 294 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 14 221 4.3E-74 T 13-10-2018 IPR004494 MauM/NapG ferredoxin-type protein Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 ProSitePatterns PS00567 Phosphoribulokinase signature. 170 183 - T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 SUPERFAMILY SSF52540 3 293 3.8E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 PRINTS PR00478 Phosphoribulokinase family signature 188 211 4.8E-34 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 PRINTS PR00478 Phosphoribulokinase family signature 170 187 4.8E-34 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 PRINTS PR00478 Phosphoribulokinase family signature 132 150 4.8E-34 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.8E-34 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 220 1.2E-71 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Thivi_1925 9a313400d5b50a9132142adb5fe84167 296 Gene3D G3DSA:3.40.50.300 1 296 3.4E-119 T 13-10-2018 Thivi_1742 40becf7a3fa838ed7cfb76c7c8351720 262 SUPERFAMILY SSF53850 29 254 2.39E-34 T 13-10-2018 Thivi_1742 40becf7a3fa838ed7cfb76c7c8351720 262 Pfam PF13531 Bacterial extracellular solute-binding protein 31 253 2.2E-37 T 13-10-2018 Thivi_1742 40becf7a3fa838ed7cfb76c7c8351720 262 Gene3D G3DSA:3.40.190.10 40 253 5.6E-26 T 13-10-2018 Thivi_1742 40becf7a3fa838ed7cfb76c7c8351720 262 Gene3D G3DSA:3.40.190.10 107 216 5.6E-26 T 13-10-2018 Thivi_4076 2658460552f9e09e9e4f75649fa9e8c8 208 Gene3D G3DSA:3.40.50.150 3 197 4.2E-19 T 13-10-2018 Thivi_4076 2658460552f9e09e9e4f75649fa9e8c8 208 SUPERFAMILY SSF53335 18 192 6.5E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4076 2658460552f9e09e9e4f75649fa9e8c8 208 Pfam PF06080 Protein of unknown function (DUF938) 6 198 1.6E-68 T 13-10-2018 IPR010342 Protein of unknown function DUF938 Thivi_2829 1b6aa2be1f10c74ba6dae1a46d174270 238 SMART SM00563 72 187 9.0E-29 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_2829 1b6aa2be1f10c74ba6dae1a46d174270 238 Pfam PF01553 Acyltransferase 69 184 6.3E-17 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Thivi_2829 1b6aa2be1f10c74ba6dae1a46d174270 238 SUPERFAMILY SSF69593 4 219 7.59E-34 T 13-10-2018 Thivi_3470 8734b3ea6762ce51a41aba8bc10b2011 446 Gene3D G3DSA:1.10.3430.10 23 446 4.6E-140 T 13-10-2018 IPR029020 Ammonium/urea transporter Thivi_3470 8734b3ea6762ce51a41aba8bc10b2011 446 ProSitePatterns PS01219 Ammonium transporters signature. 200 225 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Thivi_3470 8734b3ea6762ce51a41aba8bc10b2011 446 SUPERFAMILY SSF111352 34 425 1.83E-130 T 13-10-2018 Thivi_3470 8734b3ea6762ce51a41aba8bc10b2011 446 TIGRFAM TIGR00836 amt: ammonium transporter 38 444 8.8E-141 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Thivi_3470 8734b3ea6762ce51a41aba8bc10b2011 446 Pfam PF00909 Ammonium Transporter Family 40 444 2.8E-120 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Thivi_3141 d332e1065d608dae1e915d1fcd4cad4e 142 Gene3D G3DSA:3.40.250.10 5 142 3.5E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3141 d332e1065d608dae1e915d1fcd4cad4e 142 SMART SM00450 10 125 4.8E-11 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3141 d332e1065d608dae1e915d1fcd4cad4e 142 Pfam PF00581 Rhodanese-like domain 10 118 6.6E-11 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3141 d332e1065d608dae1e915d1fcd4cad4e 142 SUPERFAMILY SSF52821 6 141 9.82E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 Gene3D G3DSA:3.40.50.12380 178 450 3.3E-110 T 13-10-2018 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 SUPERFAMILY SSF53807 5 454 1.09E-129 T 13-10-2018 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 3 456 1.1E-205 T 13-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 55 62 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 Gene3D G3DSA:3.40.50.1980 24 177 4.7E-50 T 13-10-2018 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 37 442 5.6E-103 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2740 696e26656dc5a6287bbfe1e2e3d7b06a 487 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 122 136 - T 13-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Thivi_2351 da85d60c2735967736adc85aaba7a41f 134 Pfam PF14078 Domain of unknown function (DUF4259) 2 122 6.6E-33 T 13-10-2018 IPR025355 Protein of unknown function DUF4259 Thivi_0966 ab29db643441bc6788b1d20ee639cb05 239 Gene3D G3DSA:1.10.3290.10 23 198 2.1E-6 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_0966 ab29db643441bc6788b1d20ee639cb05 239 SUPERFAMILY SSF140931 106 178 1.31E-5 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_0702 f16edbc21cc455f755ca5f2bfb287c95 382 Gene3D G3DSA:3.30.70.270 205 380 1.5E-50 T 13-10-2018 Thivi_0702 f16edbc21cc455f755ca5f2bfb287c95 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 375 4.5E-41 T 13-10-2018 IPR000160 GGDEF domain Thivi_0702 f16edbc21cc455f755ca5f2bfb287c95 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 377 5.1E-48 T 13-10-2018 IPR000160 GGDEF domain Thivi_0702 f16edbc21cc455f755ca5f2bfb287c95 382 SMART SM00267 204 379 9.1E-55 T 13-10-2018 IPR000160 GGDEF domain Thivi_0702 f16edbc21cc455f755ca5f2bfb287c95 382 SUPERFAMILY SSF55073 223 378 2.75E-44 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_1275 650f9a7635134810b98551d0d01ff632 277 Pfam PF04654 Protein of unknown function, DUF599 21 220 2.4E-57 T 13-10-2018 IPR006747 Protein of unknown function DUF599 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 Pfam PF01235 Sodium:alanine symporter family 57 445 6.2E-144 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 91 113 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 351 373 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.5E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_0771 64f764a97a4770deb5bdacfa817d28a6 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 6.5E-154 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Thivi_2032 444890c9ac037d13c0922afb1d256a01 304 Pfam PF08241 Methyltransferase domain 89 188 1.5E-17 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_2032 444890c9ac037d13c0922afb1d256a01 304 SUPERFAMILY SSF53335 49 272 1.91E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2032 444890c9ac037d13c0922afb1d256a01 304 Gene3D G3DSA:3.40.50.150 48 302 3.7E-48 T 13-10-2018 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 SUPERFAMILY SSF48179 164 286 1.59E-37 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 286 4.3E-106 T 13-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 1.2E-34 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.0E-50 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 SUPERFAMILY SSF51735 4 164 2.34E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 PIRSF PIRSF000103 1 295 3.1E-77 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 Gene3D G3DSA:1.10.1040.10 164 291 1.5E-38 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Thivi_0676 d32a895778c48c47ff8f2a5c66f67036 304 Gene3D G3DSA:3.40.50.720 1 163 5.0E-57 T 13-10-2018 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 Gene3D G3DSA:3.40.50.11270 12 96 2.4E-109 T 13-10-2018 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 Gene3D G3DSA:3.40.1010.20 97 196 2.4E-109 T 13-10-2018 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 8.3E-99 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 Gene3D G3DSA:3.40.1010.20 6 281 2.4E-109 T 13-10-2018 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.465 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Thivi_4529 1816cc3f4029cfd0445d16e0c53b5f0c 317 Pfam PF02401 LytB protein 3 282 1.4E-89 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 Pfam PF13646 HEAT repeats 114 198 1.1E-14 T 13-10-2018 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 Gene3D G3DSA:1.25.10.10 5 206 7.6E-25 T 13-10-2018 IPR011989 Armadillo-like helical Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SMART SM00567 E-Z type HEAT repeats 158 187 500.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SMART SM00567 E-Z type HEAT repeats 65 94 640.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SMART SM00567 E-Z type HEAT repeats 126 155 190.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SMART SM00567 E-Z type HEAT repeats 35 62 880.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SMART SM00567 E-Z type HEAT repeats 96 124 34.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Thivi_0324 cf726c465bcd9c3fffbf7c7bbbf612d0 207 SUPERFAMILY SSF48371 23 185 8.9E-21 T 13-10-2018 IPR016024 Armadillo-type fold Thivi_4054 82a58791dbf842d32b51f3f095964c79 307 Gene3D G3DSA:3.90.550.10 77 212 3.0E-5 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4054 82a58791dbf842d32b51f3f095964c79 307 SUPERFAMILY SSF53448 18 207 5.34E-8 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2732 f3a6e1804073c5eef3e7b7aa09d2d793 615 Pfam PF05787 Bacterial protein of unknown function (DUF839) 161 539 5.7E-27 T 13-10-2018 IPR008557 Protein of unknown function DUF839 Thivi_0754 6c7710b12f8f3590198b559a7759ff4e 250 SUPERFAMILY SSF53335 17 242 3.5E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0754 6c7710b12f8f3590198b559a7759ff4e 250 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 15 242 1.6E-76 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Thivi_0754 6c7710b12f8f3590198b559a7759ff4e 250 Pfam PF08241 Methyltransferase domain 71 166 3.1E-20 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_0754 6c7710b12f8f3590198b559a7759ff4e 250 Gene3D G3DSA:3.40.50.150 15 247 2.3E-62 T 13-10-2018 Thivi_0754 6c7710b12f8f3590198b559a7759ff4e 250 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 15 248 36.061 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Thivi_1635 559d9a6d9dfdef5922eb7dbdaaccb99c 248 Pfam PF01545 Cation efflux family 24 200 5.6E-12 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_1635 559d9a6d9dfdef5922eb7dbdaaccb99c 248 Gene3D G3DSA:1.20.1510.10 20 202 1.4E-9 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_1635 559d9a6d9dfdef5922eb7dbdaaccb99c 248 SUPERFAMILY SSF161111 19 202 7.19E-34 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_2333 f8f344355f75409a6db57b87030420ad 478 Gene3D G3DSA:3.30.70.2740 343 424 1.0E-17 T 13-10-2018 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 SUPERFAMILY SSF55103 227 466 6.21E-68 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 Gene3D G3DSA:3.30.465.40 29 243 8.3E-64 T 13-10-2018 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 Gene3D G3DSA:1.10.45.10 425 464 2.5E-13 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 Pfam PF01565 FAD binding domain 48 186 2.2E-33 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 SUPERFAMILY SSF56176 13 224 4.07E-64 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Thivi_2333 f8f344355f75409a6db57b87030420ad 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 463 2.7E-66 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Thivi_1014 452094a61ff22a15cc513d944f0fb805 196 PIRSF PIRSF000013 4 176 7.3E-12 T 13-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 Thivi_1014 452094a61ff22a15cc513d944f0fb805 196 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 168 1.2E-28 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal Thivi_1014 452094a61ff22a15cc513d944f0fb805 196 SUPERFAMILY SSF48695 24 167 5.63E-19 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1014 452094a61ff22a15cc513d944f0fb805 196 Gene3D G3DSA:1.10.3820.10 5 178 1.4E-26 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily Thivi_2332 7ced11451984c6385c7ff76b43376253 199 SMART SM00749 138 199 5.2 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2332 7ced11451984c6385c7ff76b43376253 199 SMART SM00749 59 121 15.0 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_2332 7ced11451984c6385c7ff76b43376253 199 Pfam PF04972 BON domain 60 121 1.4E-10 T 13-10-2018 IPR007055 BON domain Thivi_2332 7ced11451984c6385c7ff76b43376253 199 Pfam PF04972 BON domain 146 198 7.9E-11 T 13-10-2018 IPR007055 BON domain Thivi_2994 7013283548e50cb24ac4ebe77919f87f 83 Pfam PF00037 4Fe-4S binding domain 4 25 1.9E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_2994 7013283548e50cb24ac4ebe77919f87f 83 Gene3D G3DSA:3.30.70.20 2 83 3.9E-34 T 13-10-2018 Thivi_2994 7013283548e50cb24ac4ebe77919f87f 83 SUPERFAMILY SSF54862 4 69 4.51E-20 T 13-10-2018 Thivi_2994 7013283548e50cb24ac4ebe77919f87f 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1683 01abf7a2d05388514d95056798080955 208 SUPERFAMILY SSF63965 2 204 2.35E-74 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Thivi_1683 01abf7a2d05388514d95056798080955 208 Pfam PF02570 Precorrin-8X methylmutase 11 203 1.5E-73 T 13-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Thivi_1683 01abf7a2d05388514d95056798080955 208 Gene3D G3DSA:3.40.50.10230 1 206 3.1E-83 T 13-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Thivi_0698 6b7d23b7f180409a817c4f1987381bec 154 SUPERFAMILY SSF55718 36 132 8.01E-18 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_0698 6b7d23b7f180409a817c4f1987381bec 154 Pfam PF02036 SCP-2 sterol transfer family 32 128 1.1E-13 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Thivi_0698 6b7d23b7f180409a817c4f1987381bec 154 Gene3D G3DSA:3.30.1050.10 18 141 1.8E-5 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_4316 00d09af72ae11a93c1321280ca76a48e 398 PIRSF PIRSF026508 12 390 4.8E-106 T 13-10-2018 IPR008863 Toxic anion resistance Thivi_4316 00d09af72ae11a93c1321280ca76a48e 398 Pfam PF05816 Toxic anion resistance protein (TelA) 57 383 4.1E-112 T 13-10-2018 IPR008863 Toxic anion resistance Thivi_1408 1c4bedffb5c885983ff3d25cd1122b1c 444 Gene3D G3DSA:1.25.40.10 70 257 9.8E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1408 1c4bedffb5c885983ff3d25cd1122b1c 444 SUPERFAMILY SSF48452 167 256 5.06E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 Gene3D G3DSA:1.10.8.80 215 294 4.9E-12 T 13-10-2018 Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 Pfam PF13519 von Willebrand factor type A domain 431 534 1.1E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 Gene3D G3DSA:3.40.50.300 52 193 3.0E-13 T 13-10-2018 Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 SUPERFAMILY SSF53300 431 598 1.78E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 SMART SM00327 428 603 8.3E-15 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 SUPERFAMILY SSF52540 73 286 5.75E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 TIGRFAM TIGR02031 BchD-ChlD: magnesium chelatase ATPase subunit D 38 602 6.1E-154 T 13-10-2018 IPR011776 Magnesium chelatase, ATPase subunit D GO:0005524|GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_1845 50f420cb0bfa054c5b70eee0d8c09aa6 611 Gene3D G3DSA:3.40.50.410 425 609 1.8E-17 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3304 f809071b99302a3446b35b3be1dfa873 673 SUPERFAMILY SSF58104 372 672 1.7E-66 T 13-10-2018 Thivi_3304 f809071b99302a3446b35b3be1dfa873 673 SMART SM00283 410 671 2.6E-83 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_3304 f809071b99302a3446b35b3be1dfa873 673 Gene3D G3DSA:1.10.287.950 348 673 5.7E-65 T 13-10-2018 Thivi_3304 f809071b99302a3446b35b3be1dfa873 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 639 6.6E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0444 e70de72b851baf1f734f75736ed51ad8 81 Pfam PF04102 SlyX 18 81 7.1E-19 T 13-10-2018 IPR007236 SlyX Thivi_0447 71403b616b043f27b4584e6c5adf160d 165 SUPERFAMILY SSF46785 30 159 1.73E-40 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0447 71403b616b043f27b4584e6c5adf160d 165 Pfam PF01475 Ferric uptake regulator family 35 155 3.0E-43 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Thivi_0447 71403b616b043f27b4584e6c5adf160d 165 Gene3D G3DSA:1.10.10.10 25 109 3.6E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0447 71403b616b043f27b4584e6c5adf160d 165 Gene3D G3DSA:3.30.1490.190 110 165 1.4E-24 T 13-10-2018 Thivi_2803 2120fecfddb3f190a2507e58818efa0b 272 Pfam PF07728 AAA domain (dynein-related subfamily) 41 174 3.5E-31 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Thivi_2803 2120fecfddb3f190a2507e58818efa0b 272 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 187 269 1.3E-29 T 13-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thivi_2803 2120fecfddb3f190a2507e58818efa0b 272 SUPERFAMILY SSF52540 31 234 4.02E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2803 2120fecfddb3f190a2507e58818efa0b 272 Gene3D G3DSA:3.40.50.300 26 191 2.7E-28 T 13-10-2018 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PIRSF PIRSF001369 39 431 6.9E-165 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 Pfam PF00285 Citrate synthase, C-terminal domain 48 414 3.5E-137 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 425 2.3E-215 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 Gene3D G3DSA:1.10.580.10 59 414 3.9E-146 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 362 378 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 298 318 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 167 180 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 243 271 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 221 236 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 PRINTS PR00143 Citrate synthase signature 382 396 1.9E-55 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 SUPERFAMILY SSF48256 8 431 6.28E-162 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 Gene3D G3DSA:2.20.28.60 4 52 1.2E-16 T 13-10-2018 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Thivi_2850 a7840b810291b4ebca45eaea5e817c8d 431 Gene3D G3DSA:1.10.230.10 270 379 3.9E-146 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 SUPERFAMILY SSF53335 22 242 4.49E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 Pfam PF13649 Methyltransferase domain 64 159 5.7E-12 T 13-10-2018 Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 5 243 34.752 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 Gene3D G3DSA:3.40.50.150 20 243 7.3E-52 T 13-10-2018 Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 7 241 8.8E-67 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Thivi_3571 ac2ebf997a2b0d7b6cd3dd0ef8b27008 243 PIRSF PIRSF006325 3 243 1.6E-75 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Thivi_3827 63cd739d22d78142ef48fb63efbe6c27 322 Gene3D G3DSA:2.40.10.340 151 297 4.0E-32 T 13-10-2018 Thivi_3827 63cd739d22d78142ef48fb63efbe6c27 322 Gene3D G3DSA:2.40.10.350 210 287 4.0E-32 T 13-10-2018 Thivi_3827 63cd739d22d78142ef48fb63efbe6c27 322 Pfam PF04085 rod shape-determining protein MreC 157 299 3.2E-36 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Thivi_3827 63cd739d22d78142ef48fb63efbe6c27 322 PIRSF PIRSF038471 32 312 1.1E-76 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Thivi_3827 63cd739d22d78142ef48fb63efbe6c27 322 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 35 304 6.2E-62 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Thivi_1993 6f1aea83998fcb86e7d33f6adbdcb5b4 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 12 140 9.3E-31 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_1993 6f1aea83998fcb86e7d33f6adbdcb5b4 142 PIRSF PIRSF004681 1 141 1.7E-33 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_1993 6f1aea83998fcb86e7d33f6adbdcb5b4 142 SUPERFAMILY SSF111038 1 140 7.72E-39 T 13-10-2018 IPR035917 YjbQ-like superfamily Thivi_1993 6f1aea83998fcb86e7d33f6adbdcb5b4 142 Pfam PF01894 Uncharacterised protein family UPF0047 20 138 7.8E-35 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 Thivi_1993 6f1aea83998fcb86e7d33f6adbdcb5b4 142 Gene3D G3DSA:2.60.120.460 1 140 1.0E-42 T 13-10-2018 IPR035917 YjbQ-like superfamily Thivi_1695 0fc87d78467f3b80f30a6de2c1d47fa2 73 SUPERFAMILY SSF143100 6 65 1.28E-7 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_0249 234c9f5270c293303b4f09c17995526b 467 TIGRFAM TIGR00260 thrC: threonine synthase 66 423 6.6E-88 T 13-10-2018 IPR004450 Threonine synthase-like Thivi_0249 234c9f5270c293303b4f09c17995526b 467 Gene3D G3DSA:3.40.50.1100 96 427 2.2E-148 T 13-10-2018 Thivi_0249 234c9f5270c293303b4f09c17995526b 467 Pfam PF14821 Threonine synthase N terminus 2 80 5.1E-28 T 13-10-2018 IPR029144 Threonine synthase, N-terminal Thivi_0249 234c9f5270c293303b4f09c17995526b 467 Gene3D G3DSA:3.40.50.1100 107 439 2.2E-148 T 13-10-2018 Thivi_0249 234c9f5270c293303b4f09c17995526b 467 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 101 115 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Thivi_0249 234c9f5270c293303b4f09c17995526b 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 396 5.7E-17 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Thivi_0249 234c9f5270c293303b4f09c17995526b 467 SUPERFAMILY SSF53686 1 456 1.0E-158 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thivi_0249 234c9f5270c293303b4f09c17995526b 467 Gene3D G3DSA:3.90.1380.10 1 86 1.6E-28 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Thivi_2156 6b3acb970b4d365bf485a06a41963ae0 424 SUPERFAMILY SSF56935 28 423 1.1E-61 T 13-10-2018 Thivi_2156 6b3acb970b4d365bf485a06a41963ae0 424 Gene3D G3DSA:2.40.160.60 28 424 4.9E-82 T 13-10-2018 Thivi_2156 6b3acb970b4d365bf485a06a41963ae0 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 191 424 2.7E-39 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Thivi_4535 2300791c1910729aacf2c78240ad1e46 483 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 194 483 2.8E-22 T 13-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 Thivi_4535 2300791c1910729aacf2c78240ad1e46 483 SMART SM00869 190 472 1.9E-40 T 13-10-2018 IPR005546 Autotransporter beta-domain Thivi_4535 2300791c1910729aacf2c78240ad1e46 483 SUPERFAMILY SSF103515 186 483 1.22E-44 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Thivi_4535 2300791c1910729aacf2c78240ad1e46 483 Gene3D G3DSA:2.40.128.130 168 483 8.2E-61 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Thivi_4535 2300791c1910729aacf2c78240ad1e46 483 Pfam PF03797 Autotransporter beta-domain 201 461 3.6E-54 T 13-10-2018 IPR005546 Autotransporter beta-domain Thivi_2623 333493711a377a8158b6228061ff6c63 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 144 168 1.8E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2623 333493711a377a8158b6228061ff6c63 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.8E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2623 333493711a377a8158b6228061ff6c63 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.8E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2623 333493711a377a8158b6228061ff6c63 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.8E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2623 333493711a377a8158b6228061ff6c63 262 PIRSF PIRSF006648 2 259 1.8E-21 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Thivi_2623 333493711a377a8158b6228061ff6c63 262 Pfam PF01061 ABC-2 type transporter 15 224 3.8E-34 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Thivi_3208 8638a92fe798ea599202b45076438f43 178 Gene3D G3DSA:2.40.50.90 38 168 2.7E-26 T 13-10-2018 IPR035437 SNase-like, OB-fold superfamily Thivi_3208 8638a92fe798ea599202b45076438f43 178 SMART SM00318 39 163 6.4E-16 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Thivi_3208 8638a92fe798ea599202b45076438f43 178 Pfam PF00565 Staphylococcal nuclease homologue 65 162 3.5E-16 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 Thivi_3208 8638a92fe798ea599202b45076438f43 178 ProSitePatterns PS01284 Thermonuclease family signature 2. 104 114 - T 13-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 Thivi_3208 8638a92fe798ea599202b45076438f43 178 SUPERFAMILY SSF50199 41 164 1.16E-26 T 13-10-2018 Thivi_3904 7b2ce9a7a4daf49cc303325855f55ea4 549 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 295 378 4.6E-19 T 13-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Thivi_3904 7b2ce9a7a4daf49cc303325855f55ea4 549 Gene3D G3DSA:3.30.565.60 216 381 2.8E-42 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily Thivi_3904 7b2ce9a7a4daf49cc303325855f55ea4 549 SUPERFAMILY SSF46785 475 545 3.25E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_3904 7b2ce9a7a4daf49cc303325855f55ea4 549 Pfam PF04326 Putative DNA-binding domain 4 122 3.1E-10 T 13-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Thivi_3904 7b2ce9a7a4daf49cc303325855f55ea4 549 Gene3D G3DSA:3.30.950.30 1 122 2.3E-20 T 13-10-2018 IPR038461 Schlafen, AAA domain superfamily Thivi_0348 f1455deb5c90e795399668840e17b3d7 287 Pfam PF08668 HDOD domain 18 214 2.5E-50 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_0348 f1455deb5c90e795399668840e17b3d7 287 SUPERFAMILY SSF109604 5 276 2.97E-62 T 13-10-2018 Thivi_0348 f1455deb5c90e795399668840e17b3d7 287 Gene3D G3DSA:1.10.3210.10 1 283 7.6E-65 T 13-10-2018 Thivi_2235 e2ff0c90783c653b3cec04513bde572b 107 Gene3D G3DSA:3.30.160.100 1 103 8.9E-40 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Thivi_2235 e2ff0c90783c653b3cec04513bde572b 107 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 96 5.3E-35 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Thivi_2235 e2ff0c90783c653b3cec04513bde572b 107 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.1E-30 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Thivi_2235 e2ff0c90783c653b3cec04513bde572b 107 SUPERFAMILY SSF69754 1 97 2.75E-37 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like Thivi_2557 613aca2ed3f9bdb5c9170b23d451757e 103 Pfam PF04972 BON domain 36 101 5.7E-20 T 13-10-2018 IPR007055 BON domain Thivi_2557 613aca2ed3f9bdb5c9170b23d451757e 103 SMART SM00749 41 103 1.5E-6 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Thivi_0684 f2c0c56034de867380484327f518aabb 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 213 1.5E-14 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Thivi_0684 f2c0c56034de867380484327f518aabb 330 Pfam PF08279 HTH domain 3 57 4.1E-9 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 Thivi_0684 f2c0c56034de867380484327f518aabb 330 SUPERFAMILY SSF46785 2 58 8.16E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_0684 f2c0c56034de867380484327f518aabb 330 Gene3D G3DSA:3.30.930.10 71 277 1.4E-64 T 13-10-2018 Thivi_0684 f2c0c56034de867380484327f518aabb 330 SUPERFAMILY SSF55681 85 276 2.2E-56 T 13-10-2018 Thivi_0684 f2c0c56034de867380484327f518aabb 330 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 329 3.5E-57 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_0684 f2c0c56034de867380484327f518aabb 330 SUPERFAMILY SSF50037 280 329 1.88E-6 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Thivi_0684 f2c0c56034de867380484327f518aabb 330 Gene3D G3DSA:2.30.30.100 278 330 4.5E-13 T 13-10-2018 Thivi_0684 f2c0c56034de867380484327f518aabb 330 Gene3D G3DSA:1.10.10.10 1 62 1.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_0684 f2c0c56034de867380484327f518aabb 330 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 329 32.625 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Thivi_0684 f2c0c56034de867380484327f518aabb 330 Pfam PF02237 Biotin protein ligase C terminal domain 278 329 1.1E-7 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Thivi_2263 bcbc82b3549f8d545dc5291a98e43c0f 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 20 368 1.5E-127 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Thivi_2263 bcbc82b3549f8d545dc5291a98e43c0f 458 Pfam PF02601 Exonuclease VII, large subunit 135 448 8.1E-92 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Thivi_2263 bcbc82b3549f8d545dc5291a98e43c0f 458 Pfam PF13742 OB-fold nucleic acid binding domain 19 111 3.6E-29 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Thivi_2263 bcbc82b3549f8d545dc5291a98e43c0f 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 16 453 28.8 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Pfam PF16918 Protein kinase G tetratricopeptide repeat 237 370 3.1E-7 T 13-10-2018 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 541 574 56.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 202 235 73.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 439 472 62.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 473 507 54.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 508 539 210.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SMART SM00028 405 438 46.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Pfam PF13176 Tetratricopeptide repeat 511 540 0.015 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SUPERFAMILY SSF48452 406 576 5.9E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 SUPERFAMILY SSF48452 107 364 1.76E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Pfam PF13432 Tetratricopeptide repeat 380 433 0.015 T 13-10-2018 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Pfam PF13432 Tetratricopeptide repeat 443 508 2.8E-6 T 13-10-2018 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Gene3D G3DSA:1.25.40.10 280 598 3.3E-49 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4175 a1540f40adfaf305b9d907e731281933 607 Gene3D G3DSA:1.25.40.10 63 279 7.9E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3125 b3c2a4c5a5e2d2534b3d7a0a460e009f 378 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 127 362 1.5E-32 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_3125 b3c2a4c5a5e2d2534b3d7a0a460e009f 378 Gene3D G3DSA:3.20.20.110 119 378 1.1E-92 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_3125 b3c2a4c5a5e2d2534b3d7a0a460e009f 378 SUPERFAMILY SSF54966 8 118 4.51E-17 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_3125 b3c2a4c5a5e2d2534b3d7a0a460e009f 378 SUPERFAMILY SSF51649 118 363 2.36E-70 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_3125 b3c2a4c5a5e2d2534b3d7a0a460e009f 378 Gene3D G3DSA:3.30.70.150 7 118 3.8E-36 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-21 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 Pfam PF03466 LysR substrate binding domain 87 295 3.8E-51 T 13-10-2018 IPR005119 LysR, substrate-binding Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 Gene3D G3DSA:3.40.190.290 91 302 3.3E-50 T 13-10-2018 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 SUPERFAMILY SSF53850 86 297 6.84E-50 T 13-10-2018 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 SUPERFAMILY SSF46785 4 111 7.32E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2155 03d72f29a681896ae4ee604a0a221975 302 Gene3D G3DSA:1.10.10.10 1 90 8.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 SUPERFAMILY SSF52540 37 272 2.81E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 SMART SM00382 61 256 3.1E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 Gene3D G3DSA:3.40.50.300 14 282 2.0E-62 T 13-10-2018 Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 ProSitePatterns PS00211 ABC transporters family signature. 181 195 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 37 284 2.3E-119 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Thivi_3048 dbddd659e8012f33404a7f9a26c8f55a 284 Pfam PF00005 ABC transporter 53 208 1.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_2812 1fcd143e050ea51597fe01433a4fd2ff 478 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 72 439 2.6E-113 T 13-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Thivi_2812 1fcd143e050ea51597fe01433a4fd2ff 478 SUPERFAMILY SSF56672 59 375 8.9E-49 T 13-10-2018 Thivi_2812 1fcd143e050ea51597fe01433a4fd2ff 478 Pfam PF08388 Group II intron, maturase-specific domain 373 445 7.0E-13 T 13-10-2018 IPR013597 Group II intron, maturase-specific Thivi_2812 1fcd143e050ea51597fe01433a4fd2ff 478 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 130 351 1.8E-39 T 13-10-2018 IPR000477 Reverse transcriptase domain Thivi_0787 be10391218e605fc7dc10c87648da4e5 109 SUPERFAMILY SSF47823 31 85 7.45E-9 T 13-10-2018 Thivi_0787 be10391218e605fc7dc10c87648da4e5 109 Gene3D G3DSA:1.10.150.130 24 90 1.8E-9 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal Thivi_0787 be10391218e605fc7dc10c87648da4e5 109 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 38 82 2.1E-5 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Thivi_1669 fbff50e6bc6aa4c18eafe4fdc7e4d120 364 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 337 35.655 T 13-10-2018 IPR033752 MetA family Thivi_1669 fbff50e6bc6aa4c18eafe4fdc7e4d120 364 Gene3D G3DSA:3.40.50.880 1 337 4.3E-91 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1669 fbff50e6bc6aa4c18eafe4fdc7e4d120 364 Pfam PF04204 Homoserine O-succinyltransferase 2 334 1.3E-90 T 13-10-2018 IPR033752 MetA family Thivi_1669 fbff50e6bc6aa4c18eafe4fdc7e4d120 364 SUPERFAMILY SSF52317 18 333 1.1E-65 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_1669 fbff50e6bc6aa4c18eafe4fdc7e4d120 364 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 35 255 5.0E-94 T 13-10-2018 Thivi_1774 f7bf339804a0ae7ce1bf31dd1c96c1ee 351 Pfam PF01992 ATP synthase (C/AC39) subunit 10 335 1.7E-49 T 13-10-2018 IPR002843 ATPase, V0 complex, c/d subunit Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1774 f7bf339804a0ae7ce1bf31dd1c96c1ee 351 Gene3D G3DSA:1.20.1690.10 187 299 1.2E-27 T 13-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1774 f7bf339804a0ae7ce1bf31dd1c96c1ee 351 Gene3D G3DSA:1.10.132.50 8 331 1.2E-27 T 13-10-2018 Thivi_1774 f7bf339804a0ae7ce1bf31dd1c96c1ee 351 SUPERFAMILY SSF103486 8 338 4.32E-27 T 13-10-2018 IPR036079 V-type ATP synthase subunit C-like Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1774 f7bf339804a0ae7ce1bf31dd1c96c1ee 351 Gene3D G3DSA:1.20.1690.10 82 186 1.2E-27 T 13-10-2018 IPR035067 V-type ATPase subunit c Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 Gene3D G3DSA:2.150.10.10 911 1112 5.4E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 PRINTS PR00313 NodO calcium binding signature 988 996 1.2E-7 T 13-10-2018 Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 PRINTS PR00313 NodO calcium binding signature 1015 1024 1.2E-7 T 13-10-2018 Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 PRINTS PR00313 NodO calcium binding signature 181 192 1.2E-7 T 13-10-2018 Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 PRINTS PR00313 NodO calcium binding signature 624 632 1.2E-7 T 13-10-2018 Thivi_1944 5708f45444676cec31bb2d6f79a8ad7c 1169 SUPERFAMILY SSF51120 833 1053 7.85E-11 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal Thivi_3184 8223955aec55afefa3d4d4e8832a19ef 220 Pfam PF02508 Rnf-Nqr subunit, membrane protein 15 193 7.0E-65 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3184 8223955aec55afefa3d4d4e8832a19ef 220 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 205 25.848 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_3184 8223955aec55afefa3d4d4e8832a19ef 220 PIRSF PIRSF006102 10 213 6.6E-69 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3184 8223955aec55afefa3d4d4e8832a19ef 220 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 15 202 2.0E-71 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Thivi_2274 c7780c1297fb3c3dad548e1652318119 366 Gene3D G3DSA:3.20.20.70 7 365 1.9E-139 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2274 c7780c1297fb3c3dad548e1652318119 366 SUPERFAMILY SSF51395 5 363 4.31E-126 T 13-10-2018 Thivi_2274 c7780c1297fb3c3dad548e1652318119 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 340 7.0E-81 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Thivi_2920 8becc5ad0221ffa6d7b120965804193f 350 SUPERFAMILY SSF53300 5 160 2.23E-21 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2920 8becc5ad0221ffa6d7b120965804193f 350 SMART SM00327 3 180 1.0E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2920 8becc5ad0221ffa6d7b120965804193f 350 Gene3D G3DSA:3.40.50.410 6 167 1.2E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_2920 8becc5ad0221ffa6d7b120965804193f 350 Pfam PF00092 von Willebrand factor type A domain 6 159 2.8E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2920 8becc5ad0221ffa6d7b120965804193f 350 Pfam PF15616 TerY-C metal binding domain 219 350 1.5E-57 T 13-10-2018 IPR028274 TerY-C metal binding domain Thivi_0756 414655aa5f2328cdba6ab961e32c19ae 353 Pfam PF00535 Glycosyl transferase family 2 31 196 1.5E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_0756 414655aa5f2328cdba6ab961e32c19ae 353 Gene3D G3DSA:3.90.550.10 7 256 4.5E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0756 414655aa5f2328cdba6ab961e32c19ae 353 SUPERFAMILY SSF53448 27 288 7.23E-45 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 SUPERFAMILY SSF53756 5 358 2.3E-119 T 13-10-2018 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 357 36.727 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 Gene3D G3DSA:3.40.50.2000 7 347 1.5E-117 T 13-10-2018 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 Gene3D G3DSA:3.40.50.2000 162 341 1.5E-117 T 13-10-2018 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 346 8.1E-35 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 351 1.3E-106 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_2319 56a09da51d0cdf2c571073a0007df099 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 7.2E-41 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Thivi_3266 67097d8867de3fb271ae164b8d03d12b 166 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 12 147 4.0E-14 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Thivi_3266 67097d8867de3fb271ae164b8d03d12b 166 Gene3D G3DSA:3.30.479.10 6 162 5.3E-31 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Thivi_3266 67097d8867de3fb271ae164b8d03d12b 166 SUPERFAMILY SSF55620 12 162 3.5E-26 T 13-10-2018 Thivi_2166 167759fbf68a20b377aa4eba9e4cad94 198 Gene3D G3DSA:2.60.60.30 20 187 5.5E-55 T 13-10-2018 Thivi_2166 167759fbf68a20b377aa4eba9e4cad94 198 Pfam PF02342 TerD domain 1 181 2.7E-55 T 13-10-2018 IPR003325 TerD domain Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 PIRSF PIRSF015855 5 455 1.2E-135 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 88 94 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 335 357 1.3E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 1.3E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 1.3E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 358 372 1.3E-21 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 Pfam PF01555 DNA methylase 85 378 2.1E-46 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_4133 b624ca2a0b572e9a1831898b1c294c14 548 SUPERFAMILY SSF53335 62 388 6.9E-66 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2969 e927f50ebe6ff22d99f48dd7012b28a0 65 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 29 65 4.7E-6 T 13-10-2018 IPR021793 Major outer membrane lipoprotein Oprl Thivi_4078 7b09f5a7a5b41c5b69339ca147b2389f 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 185 3.3E-49 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Thivi_4078 7b09f5a7a5b41c5b69339ca147b2389f 198 SMART SM01207 9 186 1.7E-78 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Thivi_4078 7b09f5a7a5b41c5b69339ca147b2389f 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 195 2.8E-58 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Thivi_4078 7b09f5a7a5b41c5b69339ca147b2389f 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 194 19.244 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Thivi_3704 7a5eb937192ad82f42d19549e1bad28c 352 Gene3D G3DSA:3.40.50.720 4 323 2.4E-129 T 13-10-2018 Thivi_3704 7a5eb937192ad82f42d19549e1bad28c 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 324 1.0E-96 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_3704 7a5eb937192ad82f42d19549e1bad28c 352 SUPERFAMILY SSF51735 1 334 1.06E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3704 7a5eb937192ad82f42d19549e1bad28c 352 Gene3D G3DSA:3.90.25.10 201 331 2.4E-129 T 13-10-2018 Thivi_3704 7a5eb937192ad82f42d19549e1bad28c 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 1.4E-151 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Thivi_1489 bebb9a69a0c32d4fc1c119a8cb73ca1a 312 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 48 212 1.4E-22 T 13-10-2018 IPR010183 Bacteriophage lambda, Bet Thivi_1489 bebb9a69a0c32d4fc1c119a8cb73ca1a 312 Pfam PF03837 RecT family 33 212 1.0E-14 T 13-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 Thivi_3510 9833369998e124227c0471c28b34f9d4 144 Pfam PF06252 Protein of unknown function (DUF1018) 17 134 2.9E-26 T 13-10-2018 IPR009363 Bacteriophage Mu, Gp16 Thivi_1679 688164b250394a5a1a1974a1ed171002 368 SUPERFAMILY SSF54862 13 65 2.09E-5 T 13-10-2018 Thivi_1679 688164b250394a5a1a1974a1ed171002 368 TIGRFAM TIGR02484 CitB: CitB domain protein 3 362 2.3E-132 T 13-10-2018 IPR012830 Citrate utilization protein B Thivi_1679 688164b250394a5a1a1974a1ed171002 368 SUPERFAMILY SSF103501 211 357 2.35E-23 T 13-10-2018 IPR036197 NarG-like superfamily Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 384 481 1.1E-19 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 61 72 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 Gene3D G3DSA:3.20.20.70 47 308 2.4E-30 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 Pfam PF04055 Radical SAM superfamily 61 241 2.6E-25 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 SUPERFAMILY SSF102114 50 263 1.09E-34 T 13-10-2018 Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 SUPERFAMILY SSF53146 373 487 6.93E-29 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 Gene3D G3DSA:3.30.420.130 371 491 1.5E-28 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_2127 0a21892a193ba742c7baeee4faa5400c 503 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 34 483 7.5E-194 T 13-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 Thivi_1950 15546f521f514844928410bb38c8a2fe 80 Pfam PF13711 Domain of unknown function (DUF4160) 9 76 2.4E-21 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_2488 dcf61fb71ca554798acbd3b6d779ebf0 79 SUPERFAMILY SSF143880 1 75 3.27E-18 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_2488 dcf61fb71ca554798acbd3b6d779ebf0 79 Gene3D G3DSA:3.30.2020.10 1 77 1.1E-7 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_2488 dcf61fb71ca554798acbd3b6d779ebf0 79 Pfam PF10387 Protein of unknown function (DUF2442) 4 76 1.2E-14 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 SUPERFAMILY SSF46785 12 91 2.66E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 Gene3D G3DSA:1.10.10.10 1 96 9.4E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 Gene3D G3DSA:1.10.10.10 98 177 7.5E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 217 31.08 T 13-10-2018 IPR007432 Protein of unknown function DUF480 Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 Pfam PF04337 Protein of unknown function, DUF480 14 160 2.5E-58 T 13-10-2018 IPR007432 Protein of unknown function DUF480 Thivi_4526 e27716b7b27dbaad0fc49a13897874cf 228 SUPERFAMILY SSF46785 95 175 1.22E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_2290 2618cf3c9a7f5349f22124703605f1dc 176 PIRSF PIRSF028301 1 174 9.0E-60 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Thivi_2290 2618cf3c9a7f5349f22124703605f1dc 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 2.2E-58 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Thivi_2290 2618cf3c9a7f5349f22124703605f1dc 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 1.1E-56 T 13-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 Thivi_4051 9eb348c41e62e37778a513747e135ed8 264 Pfam PF01522 Polysaccharide deacetylase 63 199 1.2E-28 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Thivi_4051 9eb348c41e62e37778a513747e135ed8 264 Gene3D G3DSA:3.20.20.370 1 234 1.6E-66 T 13-10-2018 Thivi_4051 9eb348c41e62e37778a513747e135ed8 264 SUPERFAMILY SSF88713 25 232 1.32E-38 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_2825 f726ece3975144abbcd54da0826b04d0 139 Gene3D G3DSA:3.30.428.10 2 132 3.0E-30 T 13-10-2018 IPR036265 HIT-like superfamily Thivi_2825 f726ece3975144abbcd54da0826b04d0 139 Pfam PF01230 HIT domain 12 100 1.8E-11 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Thivi_2825 f726ece3975144abbcd54da0826b04d0 139 PIRSF PIRSF000714 3 132 2.8E-41 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type Thivi_2825 f726ece3975144abbcd54da0826b04d0 139 SUPERFAMILY SSF54197 2 127 8.08E-25 T 13-10-2018 IPR036265 HIT-like superfamily Thivi_3109 1cb25abd30b20f611adf3e75a6d5e885 959 Pfam PF13476 AAA domain 243 326 3.8E-7 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Thivi_3109 1cb25abd30b20f611adf3e75a6d5e885 959 Gene3D G3DSA:3.40.50.300 238 406 3.9E-13 T 13-10-2018 Thivi_3109 1cb25abd30b20f611adf3e75a6d5e885 959 SUPERFAMILY SSF52540 241 878 5.38E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0355 df5455f62640321827aab5ab20c2b90c 196 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 39 168 7.1E-12 T 13-10-2018 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 Gene3D G3DSA:3.30.1150.10 177 277 2.5E-28 T 13-10-2018 Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 199 276 3.0E-25 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 SUPERFAMILY SSF74653 193 274 3.27E-25 T 13-10-2018 Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 200 277 4.4E-24 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 127 4.0E-7 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 215 233 4.0E-7 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_3447 49e27b0993e10e81bd9ef2988d012292 278 PRINTS PR01374 Gram-negative bacterial tonB protein signature 194 215 4.0E-7 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_0534 c0ef9d2a6e2e3fd0880256ebe2c8944f 397 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 384 35.254 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Thivi_0534 c0ef9d2a6e2e3fd0880256ebe2c8944f 397 SUPERFAMILY SSF48452 38 167 1.9E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0534 c0ef9d2a6e2e3fd0880256ebe2c8944f 397 Gene3D G3DSA:1.25.40.10 33 356 2.0E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1491 80a0ab6308016bdfcd759f1ed00e646c 191 Gene3D G3DSA:2.60.120.430 7 169 2.1E-5 T 13-10-2018 Thivi_1491 80a0ab6308016bdfcd759f1ed00e646c 191 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 28 162 2.5E-23 T 13-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 Thivi_1491 80a0ab6308016bdfcd759f1ed00e646c 191 SUPERFAMILY SSF49785 13 178 5.95E-26 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_3305 b7bcb4d68398ec531dac8c253ddbf200 199 Gene3D G3DSA:2.40.50.180 59 155 1.2E-12 T 13-10-2018 Thivi_3305 b7bcb4d68398ec531dac8c253ddbf200 199 SMART SM00260 36 189 1.1E-7 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_3305 b7bcb4d68398ec531dac8c253ddbf200 199 Pfam PF01584 CheW-like domain 41 191 2.7E-20 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_3305 b7bcb4d68398ec531dac8c253ddbf200 199 SUPERFAMILY SSF50341 39 193 6.41E-21 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 SMART SM00304 262 314 59.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 SMART SM00304 207 261 4.2E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 8.7E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 8.7E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 SMART SM00283 276 537 7.6E-86 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 SUPERFAMILY SSF58104 229 538 1.31E-82 T 13-10-2018 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 Pfam PF00672 HAMP domain 207 256 7.4E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 Gene3D G3DSA:1.10.287.950 207 538 7.3E-81 T 13-10-2018 Thivi_0339 6ac3cfe65b72063af02665b1b0ede86d 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 503 4.3E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Thivi_3210 2585b797f217396029a560fe384f00f1 320 SUPERFAMILY SSF53383 6 315 4.03E-49 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_3210 2585b797f217396029a560fe384f00f1 320 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 181 194 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Thivi_3210 2585b797f217396029a560fe384f00f1 320 Gene3D G3DSA:3.90.1150.10 10 290 9.2E-47 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_3210 2585b797f217396029a560fe384f00f1 320 Pfam PF00155 Aminotransferase class I and II 42 300 6.8E-25 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Thivi_3210 2585b797f217396029a560fe384f00f1 320 Gene3D G3DSA:3.40.640.10 22 229 9.2E-47 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_3210 2585b797f217396029a560fe384f00f1 320 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 3 314 1.7E-101 T 13-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Thivi_4338 f2a1a89bfd44e5cd0d32c7380a9a6240 360 Gene3D G3DSA:3.40.50.300 4 338 4.8E-24 T 13-10-2018 Thivi_4338 f2a1a89bfd44e5cd0d32c7380a9a6240 360 PIRSF PIRSF029347 116 346 3.6E-27 T 13-10-2018 IPR014555 RecF-like Thivi_4338 f2a1a89bfd44e5cd0d32c7380a9a6240 360 PIRSF PIRSF029347 3 94 9.6E-14 T 13-10-2018 IPR014555 RecF-like Thivi_4338 f2a1a89bfd44e5cd0d32c7380a9a6240 360 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 237 311 1.1E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4338 f2a1a89bfd44e5cd0d32c7380a9a6240 360 SUPERFAMILY SSF52540 1 349 5.26E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 Gene3D G3DSA:1.10.10.10 83 178 2.5E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 PIRSF PIRSF019345 1 195 7.7E-62 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 SUPERFAMILY SSF46785 3 82 1.88E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 SUPERFAMILY SSF46785 85 160 1.09E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 Gene3D G3DSA:1.10.10.10 2 82 8.4E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 179 6.4E-37 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Thivi_1147 7fab0b60058d25c2c3662265e0616364 199 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 169 6.0E-52 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 Gene3D G3DSA:4.10.220.20 1 43 1.2E-23 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 Pfam PF00556 Antenna complex alpha/beta subunit 1 41 1.3E-17 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 SUPERFAMILY SSF56918 1 43 2.59E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 ProSitePatterns PS00968 Antenna complexes alpha subunits signature. 23 41 - T 13-10-2018 IPR002361 Antenna complex, alpha subunit conserved site GO:0016021|GO:0019684|GO:0019866|GO:0030077|GO:0045156 Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 PRINTS PR00673 Light harvesting protein A chain signature 29 40 1.3E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 PRINTS PR00673 Light harvesting protein A chain signature 3 10 1.3E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1996 1840184d591edb6d2c54b648a7c3842e 44 PRINTS PR00673 Light harvesting protein A chain signature 10 29 1.3E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1680 0f3f056abc840e27a5a3985d1066f754 256 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 8 248 2.9E-71 T 13-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Thivi_1680 0f3f056abc840e27a5a3985d1066f754 256 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 8 235 2.0E-39 T 13-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Thivi_1327 8d767917d970138210f730f074fa66d0 200 SUPERFAMILY SSF52833 50 193 7.51E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 44 160 1.9E-17 T 13-10-2018 IPR000014 PAS domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Pfam PF00563 EAL domain 346 579 5.4E-73 T 13-10-2018 IPR001633 EAL domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 324 2.0E-33 T 13-10-2018 IPR000160 GGDEF domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SMART SM00091 41 108 2.5E-10 T 13-10-2018 IPR000014 PAS domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Pfam PF00989 PAS fold 42 153 4.1E-13 T 13-10-2018 IPR013767 PAS fold GO:0006355 Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SUPERFAMILY SSF55073 173 329 7.85E-41 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SUPERFAMILY SSF55785 27 155 2.58E-18 T 13-10-2018 IPR035965 PAS domain superfamily Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Gene3D G3DSA:3.20.20.450 342 593 4.3E-99 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Gene3D G3DSA:3.30.70.270 163 341 2.7E-45 T 13-10-2018 Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 327 2.2E-31 T 13-10-2018 IPR000160 GGDEF domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 Gene3D G3DSA:3.30.450.20 27 155 3.4E-21 T 13-10-2018 Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SMART SM00052 338 584 3.7E-114 T 13-10-2018 IPR001633 EAL domain Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SUPERFAMILY SSF141868 345 591 5.89E-89 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_4122 fd1d0e4f8b0f978f0a076a730bf7867b 611 SMART SM00267 157 328 1.4E-43 T 13-10-2018 IPR000160 GGDEF domain Thivi_0719 0e5c333df4c0c593dd973f110e96561f 84 SUPERFAMILY SSF142921 7 69 1.28E-5 T 13-10-2018 IPR036930 WGR domain superfamily Thivi_1982 e42ecf059eac56c311ad7a3d9140e87e 76 Gene3D G3DSA:4.10.220.20 12 67 2.6E-21 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1982 e42ecf059eac56c311ad7a3d9140e87e 76 Pfam PF00556 Antenna complex alpha/beta subunit 17 50 5.4E-8 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1982 e42ecf059eac56c311ad7a3d9140e87e 76 SUPERFAMILY SSF56918 15 62 4.71E-9 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_3842 821c9eea91988e756fd246d6ae766940 366 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 54.83 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_3842 821c9eea91988e756fd246d6ae766940 366 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 359 4.9E-152 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_3842 821c9eea91988e756fd246d6ae766940 366 Pfam PF01702 Queuine tRNA-ribosyltransferase 127 359 2.0E-88 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_3842 821c9eea91988e756fd246d6ae766940 366 Gene3D G3DSA:3.20.20.105 1 363 1.1E-160 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_3842 821c9eea91988e756fd246d6ae766940 366 SUPERFAMILY SSF51713 1 360 3.14E-156 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_3842 821c9eea91988e756fd246d6ae766940 366 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 360 3.5E-159 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Thivi_0466 bec0b915795b93841785f78a8f7f1229 99 Gene3D G3DSA:3.30.70.240 1 75 1.7E-29 T 13-10-2018 Thivi_0466 bec0b915795b93841785f78a8f7f1229 99 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 3.1E-34 T 13-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Thivi_0466 bec0b915795b93841785f78a8f7f1229 99 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 2.2E-35 T 13-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Thivi_0081 0fce92d1172fe2654fb9e9291d7fd383 199 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 188 1.1E-70 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Thivi_0081 0fce92d1172fe2654fb9e9291d7fd383 199 Pfam PF02669 K+-transporting ATPase, c chain 6 187 3.1E-77 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Thivi_0081 0fce92d1172fe2654fb9e9291d7fd383 199 PIRSF PIRSF001296 1 191 4.8E-78 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Thivi_0081 0fce92d1172fe2654fb9e9291d7fd383 199 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 36.968 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Thivi_3441 635c627e4cc578513a4340b985a14bef 355 SUPERFAMILY SSF53474 52 352 1.87E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3441 635c627e4cc578513a4340b985a14bef 355 Pfam PF00561 alpha/beta hydrolase fold 68 333 3.8E-35 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_3441 635c627e4cc578513a4340b985a14bef 355 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 5 354 2.0E-173 T 13-10-2018 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 Thivi_2144 96c0c06d793cbb344234c381ec5ecd42 136 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 13-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Thivi_2144 96c0c06d793cbb344234c381ec5ecd42 136 SUPERFAMILY SSF47188 2 127 1.83E-26 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Thivi_2144 96c0c06d793cbb344234c381ec5ecd42 136 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 127 6.2E-32 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Thivi_2144 96c0c06d793cbb344234c381ec5ecd42 136 Gene3D G3DSA:1.20.120.50 1 135 4.1E-31 T 13-10-2018 IPR035938 Hemerythrin-like superfamily Thivi_2144 96c0c06d793cbb344234c381ec5ecd42 136 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 1.7E-10 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 SUPERFAMILY SSF69189 275 367 6.08E-21 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 SUPERFAMILY SSF56601 9 275 6.44E-87 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 Gene3D G3DSA:2.60.410.10 275 365 1.7E-24 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.0E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.0E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.0E-18 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 364 3.3E-18 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 Gene3D G3DSA:3.40.710.10 25 274 1.3E-92 T 13-10-2018 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 255 3.1E-81 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Thivi_3833 98d147c8b0c873e145c1f7ec75dce27b 385 SMART SM00936 275 365 1.2E-27 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_3519 dbdb43df5c1c3e49ae76b040d4809259 513 Gene3D G3DSA:3.30.420.240 290 467 1.8E-5 T 13-10-2018 Thivi_3519 dbdb43df5c1c3e49ae76b040d4809259 513 Gene3D G3DSA:3.40.50.300 5 187 3.4E-28 T 13-10-2018 Thivi_3519 dbdb43df5c1c3e49ae76b040d4809259 513 PIRSF PIRSF007056 1 492 7.9E-181 T 13-10-2018 IPR012036 Bacteriophage Mu, Gp28 Thivi_1270 480a9189f994d1d3c38569fcf54789c8 263 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 7.4E-27 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_1270 480a9189f994d1d3c38569fcf54789c8 263 SUPERFAMILY SSF46689 15 70 4.12E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_1270 480a9189f994d1d3c38569fcf54789c8 263 Pfam PF01498 Transposase 30 75 2.5E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3161 9ef7f8bb6320b1e556b44684e9ee8691 358 Gene3D G3DSA:3.20.20.300 3 349 7.2E-114 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Thivi_3161 9ef7f8bb6320b1e556b44684e9ee8691 358 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 238 255 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Thivi_3161 9ef7f8bb6320b1e556b44684e9ee8691 358 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 288 5.2E-75 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Thivi_3161 9ef7f8bb6320b1e556b44684e9ee8691 358 SUPERFAMILY SSF51445 6 319 1.26E-79 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_3161 9ef7f8bb6320b1e556b44684e9ee8691 358 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 340 48.812 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Thivi_3782 d339d508c77a3c11f017be1170a48277 162 SUPERFAMILY SSF54427 27 146 1.09E-24 T 13-10-2018 IPR032710 NTF2-like domain superfamily Thivi_3782 d339d508c77a3c11f017be1170a48277 162 Gene3D G3DSA:3.10.450.50 21 155 4.8E-30 T 13-10-2018 Thivi_3782 d339d508c77a3c11f017be1170a48277 162 Pfam PF13474 SnoaL-like domain 34 147 4.3E-15 T 13-10-2018 IPR037401 SnoaL-like domain Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 127 2.9E-59 T 13-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 Gene3D G3DSA:3.30.720.40 74 138 5.0E-26 T 13-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 71 128 6.9E-27 T 13-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 Pfam PF13187 4Fe-4S dicluster domain 9 68 2.9E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 Gene3D G3DSA:3.30.70.20 2 73 7.3E-27 T 13-10-2018 Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3300 f0ba989ed0add60b79feb4ebf1fc4fb6 155 SUPERFAMILY SSF54862 3 115 3.57E-20 T 13-10-2018 Thivi_1419 5c15193663eb4bf0c09b7c05b624e2e5 180 Pfam PF14280 Domain of unknown function (DUF4365) 21 172 3.4E-24 T 13-10-2018 IPR025375 Domain of unknown function DUF4365 Thivi_3644 4c4c53c5a279f60dee08a4b73825baf5 358 SUPERFAMILY SSF56349 61 347 1.8E-50 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Thivi_3644 4c4c53c5a279f60dee08a4b73825baf5 358 Pfam PF00589 Phage integrase family 179 338 4.8E-26 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Thivi_3644 4c4c53c5a279f60dee08a4b73825baf5 358 Gene3D G3DSA:1.10.443.10 172 355 1.7E-36 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Thivi_0505 79ec7bb6f7b672044d770bba174bbd71 480 Pfam PF01523 Putative modulator of DNA gyrase 20 325 4.4E-45 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_0505 79ec7bb6f7b672044d770bba174bbd71 480 Gene3D G3DSA:3.30.2290.10 1 200 3.8E-10 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_0505 79ec7bb6f7b672044d770bba174bbd71 480 SUPERFAMILY SSF111283 10 475 1.03E-87 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 3 565 43.71 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Pfam PF00271 Helicase conserved C-terminal domain 234 342 3.9E-28 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Gene3D G3DSA:3.30.70.330 494 566 1.3E-13 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Pfam PF03880 DbpA RNA binding domain 494 563 5.7E-23 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Gene3D G3DSA:3.40.50.300 1 221 9.7E-71 T 13-10-2018 Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Gene3D G3DSA:3.40.50.300 222 440 5.2E-49 T 13-10-2018 Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 Pfam PF00270 DEAD/DEAH box helicase 32 196 2.7E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 SMART SM00490 261 342 1.4E-32 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 SMART SM00487 27 225 8.5E-61 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_3755 dc841d6cb1be42c426ae82f980ae0887 635 SUPERFAMILY SSF52540 77 363 9.72E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 Gene3D G3DSA:1.10.287.470 92 183 2.1E-66 T 13-10-2018 Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 Gene3D G3DSA:2.40.30.170 51 305 2.1E-66 T 13-10-2018 Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 364 2.5E-53 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 Gene3D G3DSA:2.40.420.20 306 363 2.1E-66 T 13-10-2018 Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 286 1.2E-12 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 SUPERFAMILY SSF111369 50 209 1.12E-14 T 13-10-2018 Thivi_0931 1aa64096aa99dbdbaec922e09a9d7cb1 393 Gene3D G3DSA:2.40.50.100 58 224 2.1E-66 T 13-10-2018 Thivi_2474 85947688563665fb969d648cc8a29b30 681 SUPERFAMILY SSF52540 1 622 1.66E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2474 85947688563665fb969d648cc8a29b30 681 Gene3D G3DSA:3.40.50.300 390 652 2.7E-12 T 13-10-2018 Thivi_2474 85947688563665fb969d648cc8a29b30 681 Gene3D G3DSA:3.40.50.300 1 330 2.7E-21 T 13-10-2018 Thivi_2474 85947688563665fb969d648cc8a29b30 681 Pfam PF13476 AAA domain 5 240 2.2E-13 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain Thivi_2474 85947688563665fb969d648cc8a29b30 681 TIGRFAM TIGR03185 DNA_S_dndD: DNA sulfur modification protein DndD 1 660 3.4E-77 T 13-10-2018 IPR017599 DNA sulphur modification protein DndD Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 207 221 - T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 13 356 8.1E-117 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 SUPERFAMILY SSF52540 7 350 7.14E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 Gene3D G3DSA:3.40.50.300 116 371 7.8E-88 T 13-10-2018 Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 Pfam PF00437 Type II/IV secretion system protein 59 285 2.3E-40 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_0185 4fac8c154a2bc9dd2bf22421569b40ee 394 Gene3D G3DSA:3.30.450.90 7 113 9.1E-24 T 13-10-2018 Thivi_3423 0951db8cc3dd3b90990ce6c4a5675a18 690 SUPERFAMILY SSF53300 263 396 7.63E-15 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3423 0951db8cc3dd3b90990ce6c4a5675a18 690 Gene3D G3DSA:3.40.50.410 263 415 1.4E-9 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3423 0951db8cc3dd3b90990ce6c4a5675a18 690 Pfam PF13519 von Willebrand factor type A domain 265 386 2.9E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 Pfam PF00437 Type II/IV secretion system protein 121 253 8.3E-36 T 13-10-2018 IPR001482 Type II/IV secretion system protein Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 SMART SM00382 129 254 0.0072 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 Gene3D G3DSA:3.40.50.300 109 361 3.1E-89 T 13-10-2018 Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 Gene3D G3DSA:3.30.450.90 2 107 4.0E-27 T 13-10-2018 Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 SUPERFAMILY SSF52540 10 343 2.8E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2863 5f33f768d7286cf70b5aeb653ed9506c 416 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 348 3.0E-130 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Thivi_1626 3fa08b4a4da7ddde23b0ceb1391fba03 495 Pfam PF07282 Putative transposase DNA-binding domain 344 405 7.3E-9 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Thivi_1626 3fa08b4a4da7ddde23b0ceb1391fba03 495 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 292 366 1.6E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Thivi_0069 818f79fc616a391d4062d967be60c6b9 203 Pfam PF04205 FMN-binding domain 100 189 9.4E-18 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_0069 818f79fc616a391d4062d967be60c6b9 203 PIRSF PIRSF006091 1 203 1.1E-70 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_0069 818f79fc616a391d4062d967be60c6b9 203 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 6 194 24.248 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_0069 818f79fc616a391d4062d967be60c6b9 203 SMART SM00900 100 192 1.1E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_0069 818f79fc616a391d4062d967be60c6b9 203 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 14 193 3.8E-54 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Thivi_1098 2c6048ee63ba6e72d74ed3ab20074fd2 1050 Gene3D G3DSA:3.40.50.300 35 233 1.1E-7 T 13-10-2018 Thivi_1098 2c6048ee63ba6e72d74ed3ab20074fd2 1050 SUPERFAMILY SSF52540 28 299 4.35E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1098 2c6048ee63ba6e72d74ed3ab20074fd2 1050 Pfam PF13191 AAA ATPase domain 41 223 6.1E-37 T 13-10-2018 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 40 190 4.2E-43 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 SUPERFAMILY SSF143243 16 212 4.58E-54 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 Gene3D G3DSA:3.30.460.80 4 169 1.5E-40 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 150 171 - T 13-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 117 177 2.0E-20 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3914 9e9c8482571ab864045b0f906c5c8ce3 237 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 15 197 34.138 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 TIGRFAM TIGR00444 mazG: MazG family protein 17 266 9.8E-92 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 SUPERFAMILY SSF101386 147 245 3.74E-23 T 13-10-2018 Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 Gene3D G3DSA:1.10.287.1080 140 270 7.9E-42 T 13-10-2018 Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 SUPERFAMILY SSF101386 9 110 2.06E-25 T 13-10-2018 Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 34 107 5.1E-29 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 178 235 2.2E-4 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Thivi_0804 3e9bb8273bdbeaac260c9d1369a9061a 270 Gene3D G3DSA:1.10.287.1080 7 131 3.4E-46 T 13-10-2018 Thivi_1750 9f3748e735abfeb6ddeb28a60eee76e9 375 Pfam PF12832 MFS_1 like family 3 355 1.2E-90 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain Thivi_1750 9f3748e735abfeb6ddeb28a60eee76e9 375 Gene3D G3DSA:1.20.1250.20 1 181 2.5E-21 T 13-10-2018 Thivi_1750 9f3748e735abfeb6ddeb28a60eee76e9 375 PIRSF PIRSF004925 1 375 2.6E-102 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Thivi_1750 9f3748e735abfeb6ddeb28a60eee76e9 375 Gene3D G3DSA:1.20.1250.20 188 374 2.2E-41 T 13-10-2018 Thivi_1750 9f3748e735abfeb6ddeb28a60eee76e9 375 SUPERFAMILY SSF103473 3 372 1.66E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 Gene3D G3DSA:3.30.1150.10 108 324 1.6E-22 T 13-10-2018 Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 247 324 3.3E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 SUPERFAMILY SSF74653 241 321 2.88E-15 T 13-10-2018 Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 PRINTS PR01374 Gram-negative bacterial tonB protein signature 240 261 4.4E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 PRINTS PR01374 Gram-negative bacterial tonB protein signature 154 164 4.4E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 PRINTS PR01374 Gram-negative bacterial tonB protein signature 261 279 4.4E-5 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Thivi_1161 3a915a920dcf8ffde441f90cb2a60a07 324 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 245 323 2.8E-19 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PIRSF PIRSF036406 1 342 1.3E-140 T 13-10-2018 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 SUPERFAMILY SSF54211 2 187 9.87E-39 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PRINTS PR00960 LmbP protein signature 106 127 2.9E-45 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PRINTS PR00960 LmbP protein signature 257 281 2.9E-45 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PRINTS PR00960 LmbP protein signature 148 167 2.9E-45 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PRINTS PR00960 LmbP protein signature 285 304 2.9E-45 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 PRINTS PR00960 LmbP protein signature 7 22 2.9E-45 T 13-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 SUPERFAMILY SSF55060 196 341 1.98E-26 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 Pfam PF00288 GHMP kinases N terminal domain 101 168 7.0E-14 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 Gene3D G3DSA:3.30.230.120 1 342 8.4E-120 T 13-10-2018 Thivi_4045 61a55a18b7c89be2808be2ef681d5283 342 Pfam PF08544 GHMP kinases C terminal 242 310 5.4E-10 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain Thivi_0942 34dcdfb4e64da6bf5a4aea0e90fb0c02 157 SUPERFAMILY SSF54001 34 156 5.4E-37 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Thivi_0942 34dcdfb4e64da6bf5a4aea0e90fb0c02 157 Pfam PF00877 NlpC/P60 family 49 152 7.3E-25 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Thivi_0942 34dcdfb4e64da6bf5a4aea0e90fb0c02 157 Gene3D G3DSA:3.90.1720.10 20 150 5.4E-35 T 13-10-2018 Thivi_2826 e45ff1381ac5f9eef6cc3fb1711c9fbc 251 SMART SM00852 13 173 3.5E-27 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2826 e45ff1381ac5f9eef6cc3fb1711c9fbc 251 Pfam PF00994 Probable molybdopterin binding domain 14 166 5.1E-21 T 13-10-2018 IPR001453 MoaB/Mog domain Thivi_2826 e45ff1381ac5f9eef6cc3fb1711c9fbc 251 SUPERFAMILY SSF53218 9 203 1.83E-29 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_2826 e45ff1381ac5f9eef6cc3fb1711c9fbc 251 Gene3D G3DSA:3.40.980.10 10 170 1.8E-34 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily Thivi_1872 22475369ff827d559c5360936a0831b4 83 Pfam PF03683 Uncharacterised protein family (UPF0175) 7 80 2.4E-27 T 13-10-2018 IPR005368 Uncharacterised protein family UPF0175 Thivi_1125 af98258731bb8c8a6cec9a7e07d73ed8 164 Gene3D G3DSA:3.40.30.10 81 162 3.9E-22 T 13-10-2018 Thivi_1125 af98258731bb8c8a6cec9a7e07d73ed8 164 Gene3D G3DSA:1.10.10.1590 12 80 3.4E-12 T 13-10-2018 Thivi_1125 af98258731bb8c8a6cec9a7e07d73ed8 164 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 163 3.7E-41 T 13-10-2018 Thivi_1125 af98258731bb8c8a6cec9a7e07d73ed8 164 SUPERFAMILY SSF52833 14 163 9.17E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1125 af98258731bb8c8a6cec9a7e07d73ed8 164 PIRSF PIRSF000216 1 164 1.7E-46 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0642 3bb33fb872fe521cb97a7fcc555453f7 315 Gene3D G3DSA:3.30.70.270 133 299 2.2E-55 T 13-10-2018 Thivi_0642 3bb33fb872fe521cb97a7fcc555453f7 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 298 1.1E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0642 3bb33fb872fe521cb97a7fcc555453f7 315 SMART SM00267 123 300 6.2E-55 T 13-10-2018 IPR000160 GGDEF domain Thivi_0642 3bb33fb872fe521cb97a7fcc555453f7 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 296 5.9E-45 T 13-10-2018 IPR000160 GGDEF domain Thivi_0642 3bb33fb872fe521cb97a7fcc555453f7 315 SUPERFAMILY SSF55073 144 298 4.24E-48 T 13-10-2018 IPR029787 Nucleotide cyclase Thivi_0818 10d8451a2c4c7b3708646fdcd16355f9 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 94 6.9E-7 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0818 10d8451a2c4c7b3708646fdcd16355f9 115 SUPERFAMILY SSF50118 3 102 1.31E-10 T 13-10-2018 Thivi_0818 10d8451a2c4c7b3708646fdcd16355f9 115 Gene3D G3DSA:2.30.30.110 17 110 9.2E-10 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_4125 0a732e2fb49e18c5b160bd121a2e7c79 430 SUPERFAMILY SSF51905 6 414 1.94E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4125 0a732e2fb49e18c5b160bd121a2e7c79 430 Gene3D G3DSA:3.50.50.60 3 266 9.5E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_4125 0a732e2fb49e18c5b160bd121a2e7c79 430 Pfam PF01593 Flavin containing amine oxidoreductase 13 306 9.5E-17 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_3922 2d6161c908272345ca0f7ddaa3575960 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.212 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Thivi_3922 2d6161c908272345ca0f7ddaa3575960 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.4E-24 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_2501 7648b9438c672d118772ddd0f5b07847 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 186 5.6E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Thivi_2501 7648b9438c672d118772ddd0f5b07847 695 Gene3D G3DSA:2.170.130.10 58 197 5.8E-24 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_2501 7648b9438c672d118772ddd0f5b07847 695 Pfam PF00593 TonB dependent receptor 262 693 3.2E-42 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_2501 7648b9438c672d118772ddd0f5b07847 695 Gene3D G3DSA:2.40.170.20 218 695 1.0E-59 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_2501 7648b9438c672d118772ddd0f5b07847 695 SUPERFAMILY SSF56935 70 695 6.41E-93 T 13-10-2018 Thivi_2730 14883dc6859b095661fcd9669635f687 365 PIRSF PIRSF006004 4 358 1.1E-135 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Thivi_2730 14883dc6859b095661fcd9669635f687 365 Pfam PF04055 Radical SAM superfamily 111 270 7.0E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_2730 14883dc6859b095661fcd9669635f687 365 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 346 70.318 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Thivi_2730 14883dc6859b095661fcd9669635f687 365 SUPERFAMILY SSF102114 106 315 3.01E-12 T 13-10-2018 Thivi_2730 14883dc6859b095661fcd9669635f687 365 Gene3D G3DSA:3.20.20.70 69 331 5.8E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2730 14883dc6859b095661fcd9669635f687 365 Gene3D G3DSA:1.10.150.530 7 68 1.6E-17 T 13-10-2018 Thivi_2730 14883dc6859b095661fcd9669635f687 365 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 350 3.9E-130 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Thivi_3420 fb79bc148b8c58b08522a2b9c4ff078c 234 Pfam PF12159 Protein of unknown function (DUF3593) 122 212 2.7E-24 T 13-10-2018 IPR021995 Protein of unknown function DUF3593 Thivi_3420 fb79bc148b8c58b08522a2b9c4ff078c 234 Pfam PF10693 Protein of unknown function (DUF2499) 3 87 9.7E-28 T 13-10-2018 IPR019634 Uncharacterised protein family Ycf49 Thivi_0134 eabd44a7e5e8c975e777a142b38e0fba 474 Pfam PF01593 Flavin containing amine oxidoreductase 16 393 2.0E-10 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_0134 eabd44a7e5e8c975e777a142b38e0fba 474 Gene3D G3DSA:3.50.50.60 8 466 8.0E-172 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0134 eabd44a7e5e8c975e777a142b38e0fba 474 SUPERFAMILY SSF51905 9 442 7.12E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2536 199c58d42937c0bda3b83f0cddabb34e 323 Gene3D G3DSA:1.50.10.150 7 319 1.1E-98 T 13-10-2018 IPR038665 Voltage-dependent anion channel superfamily Thivi_2536 199c58d42937c0bda3b83f0cddabb34e 323 Pfam PF03595 Voltage-dependent anion channel 13 309 2.2E-62 T 13-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Thivi_4046 6c826702f8a84e412ee7ac0f6a0f59ba 197 Gene3D G3DSA:3.40.50.10490 2 196 5.5E-71 T 13-10-2018 Thivi_4046 6c826702f8a84e412ee7ac0f6a0f59ba 197 SUPERFAMILY SSF53697 7 194 2.67E-51 T 13-10-2018 Thivi_4046 6c826702f8a84e412ee7ac0f6a0f59ba 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 4 193 36.533 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Thivi_4046 6c826702f8a84e412ee7ac0f6a0f59ba 197 Pfam PF13580 SIS domain 29 150 1.4E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Thivi_1664 c4ed34c79248dde8f9cc7a382da58e3f 348 Pfam PF03773 Predicted permease 51 345 1.3E-70 T 13-10-2018 IPR005524 Predicted permease DUF318 Thivi_3895 243746bf51423384a5efbb483d1c87ed 114 SUPERFAMILY SSF50118 4 110 2.78E-18 T 13-10-2018 Thivi_3895 243746bf51423384a5efbb483d1c87ed 114 Gene3D G3DSA:2.30.30.110 14 113 7.3E-18 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_3895 243746bf51423384a5efbb483d1c87ed 114 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 107 1.1E-17 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 Gene3D G3DSA:3.20.20.70 127 268 1.0E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 SUPERFAMILY SSF54675 7 110 1.69E-23 T 13-10-2018 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 PIRSF PIRSF006250 6 283 3.8E-58 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 TIGRFAM TIGR01334 modD: modD protein 9 279 1.4E-85 T 13-10-2018 IPR006242 Putative pyrophosphorylase ModD GO:0016763 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 109 8.5E-22 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 SUPERFAMILY SSF51690 111 279 1.96E-34 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 Gene3D G3DSA:3.90.1170.20 15 126 1.0E-62 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Thivi_0709 cb67fbd7a8c90d078a5627edb4c6496b 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 278 2.0E-26 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 147 8.3E-47 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 SUPERFAMILY SSF118196 2 229 1.03E-74 T 13-10-2018 IPR036413 YaeB-like superfamily Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 Pfam PF01980 Uncharacterised protein family UPF0066 17 141 1.8E-41 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 Gene3D G3DSA:2.40.30.70 21 145 7.1E-46 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 Gene3D G3DSA:3.30.2310.10 146 230 9.0E-18 T 13-10-2018 Thivi_4322 337597980cfbcbfe2c4744791f14a23c 241 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Thivi_3677 77caa991277039e00756e59be100f2b9 468 SUPERFAMILY SSF56801 11 444 3.01E-22 T 13-10-2018 Thivi_3677 77caa991277039e00756e59be100f2b9 468 Gene3D G3DSA:3.40.50.12780 27 355 3.7E-69 T 13-10-2018 Thivi_2912 239b2f0e1f86bf2a7dc4a91bb228d8ec 321 Pfam PF00146 NADH dehydrogenase 15 308 1.0E-41 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 341 350 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 SUPERFAMILY SSF52540 79 355 3.67E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 SUPERFAMILY SSF47917 363 417 8.37E-7 T 13-10-2018 Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 Gene3D G3DSA:3.40.50.12240 1 459 3.6E-164 T 13-10-2018 Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 350 1.8E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1786 2f240c847424e7159e3db018d1de5b5a 459 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 3 459 53.121 T 13-10-2018 IPR022879 V-type ATP synthase regulatory subunit B/beta Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 472 486 4.8E-17 T 13-10-2018 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 607 619 4.8E-17 T 13-10-2018 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 411 427 4.8E-17 T 13-10-2018 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 641 665 4.8E-17 T 13-10-2018 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 SUPERFAMILY SSF53335 273 722 1.58E-60 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 Pfam PF07669 Eco57I restriction-modification methylase 607 710 4.4E-12 T 13-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 610 616 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_3154 5300fe1b6c5498d051bffbdf2d21cf10 1122 Pfam PF12950 TaqI-like C-terminal specificity domain 824 984 7.2E-9 T 13-10-2018 IPR025931 TaqI-like C-terminal specificity domain Thivi_3674 12379e8e2f73e848437b0588fdacd701 118 Gene3D G3DSA:1.10.287.70 3 109 5.8E-19 T 13-10-2018 Thivi_3674 12379e8e2f73e848437b0588fdacd701 118 Pfam PF07885 Ion channel 26 97 2.7E-15 T 13-10-2018 IPR013099 Potassium channel domain Thivi_3674 12379e8e2f73e848437b0588fdacd701 118 SUPERFAMILY SSF81324 4 101 3.4E-22 T 13-10-2018 Thivi_3029 be88fd49b438f5087835d3c31458570f 266 Pfam PF06167 Glucose-regulated metallo-peptidase M90 7 248 3.9E-88 T 13-10-2018 IPR010384 MtfA family Thivi_3029 be88fd49b438f5087835d3c31458570f 266 Gene3D G3DSA:3.40.390.10 147 266 1.3E-37 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Thivi_3029 be88fd49b438f5087835d3c31458570f 266 SUPERFAMILY SSF55486 44 250 5.42E-40 T 13-10-2018 Thivi_3029 be88fd49b438f5087835d3c31458570f 266 Gene3D G3DSA:1.10.472.150 21 145 1.3E-44 T 13-10-2018 Thivi_1062 368aea135993a3fd42ea572b5005608d 154 Pfam PF01899 Na+/H+ ion antiporter subunit 9 154 3.5E-44 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Thivi_1062 368aea135993a3fd42ea572b5005608d 154 PIRSF PIRSF019239 1 154 3.6E-40 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Thivi_4047 d7be7c79013872e98e510013596c173d 240 SUPERFAMILY SSF53448 1 228 8.1E-54 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4047 d7be7c79013872e98e510013596c173d 240 Pfam PF00483 Nucleotidyl transferase 3 224 9.9E-25 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Thivi_4047 d7be7c79013872e98e510013596c173d 240 Gene3D G3DSA:3.90.550.10 1 231 8.5E-55 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 6.2E-18 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 6.2E-18 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 6.2E-18 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 6.2E-18 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 SUPERFAMILY SSF159127 1 75 1.24E-22 T 13-10-2018 IPR037254 HupF/HypC superfamily Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 Gene3D G3DSA:2.40.50.970 1 76 7.4E-26 T 13-10-2018 IPR037254 HupF/HypC superfamily Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 3.3E-22 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 Pfam PF01455 HupF/HypC family 1 66 8.3E-25 T 13-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thivi_3697 b797d04a673916da4a74ec4739ab126d 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 13-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Thivi_3310 22c28f2b8cf142913a8dbc64ecf99d98 342 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 256 318 1.5E-11 T 13-10-2018 IPR006260 TonB/TolA, C-terminal Thivi_3310 22c28f2b8cf142913a8dbc64ecf99d98 342 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 254 317 1.7E-14 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 Thivi_3310 22c28f2b8cf142913a8dbc64ecf99d98 342 Gene3D G3DSA:3.30.1150.10 153 332 7.6E-19 T 13-10-2018 Thivi_3310 22c28f2b8cf142913a8dbc64ecf99d98 342 SUPERFAMILY SSF74653 49 332 3.83E-16 T 13-10-2018 Thivi_1164 1bd6d2cd38e9d9f9146d670c39ef713c 401 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Thivi_1164 1bd6d2cd38e9d9f9146d670c39ef713c 401 SUPERFAMILY SSF111352 7 374 2.09E-93 T 13-10-2018 Thivi_1164 1bd6d2cd38e9d9f9146d670c39ef713c 401 Pfam PF00909 Ammonium Transporter Family 12 391 2.7E-89 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Thivi_1164 1bd6d2cd38e9d9f9146d670c39ef713c 401 Gene3D G3DSA:1.10.3430.10 1 400 3.1E-97 T 13-10-2018 IPR029020 Ammonium/urea transporter Thivi_2760 f258c1e5e8ccc87b7fb9c126709ce757 125 SUPERFAMILY SSF46626 9 124 1.28E-6 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2760 f258c1e5e8ccc87b7fb9c126709ce757 125 Pfam PF07635 Planctomycete cytochrome C 41 100 7.7E-8 T 13-10-2018 IPR011429 Cytochrome C, Planctomycete-type Thivi_1285 45a426ee4d1af8c940de4fd6dfade341 485 Pfam PF13447 Seven times multi-haem cytochrome CxxCH 72 282 8.5E-20 T 13-10-2018 Thivi_1285 45a426ee4d1af8c940de4fd6dfade341 485 SUPERFAMILY SSF48695 44 435 1.74E-62 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_1285 45a426ee4d1af8c940de4fd6dfade341 485 Gene3D G3DSA:3.90.10.10 29 116 2.4E-6 T 13-10-2018 Thivi_0487 a3dc239c4837b174ead3406bf2d41857 89 Pfam PF04319 NifZ domain 8 81 1.2E-16 T 13-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 Thivi_3939 fa893b3cbb564c16a7d96e8d4c31b65c 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_3939 fa893b3cbb564c16a7d96e8d4c31b65c 567 Pfam PF00374 Nickel-dependent hydrogenase 40 552 9.0E-212 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_3939 fa893b3cbb564c16a7d96e8d4c31b65c 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_3939 fa893b3cbb564c16a7d96e8d4c31b65c 567 Gene3D G3DSA:1.10.645.10 2 552 1.3E-219 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3939 fa893b3cbb564c16a7d96e8d4c31b65c 567 SUPERFAMILY SSF56762 3 552 3.92E-166 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_4217 96c2cc482a69d8050c532698d317397c 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 118 1.6E-38 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4217 96c2cc482a69d8050c532698d317397c 118 Gene3D G3DSA:3.30.420.100 1 118 2.1E-40 T 13-10-2018 Thivi_4217 96c2cc482a69d8050c532698d317397c 118 SUPERFAMILY SSF53137 3 116 6.76E-50 T 13-10-2018 Thivi_4217 96c2cc482a69d8050c532698d317397c 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 118 1.7E-39 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4217 96c2cc482a69d8050c532698d317397c 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 118 26.107 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2086 da711e76a6ca2a41c34a229b3eb7ad05 274 Hamap MF_01384 Urease accessory protein UreD [ureD]. 8 258 30.687 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Thivi_2086 da711e76a6ca2a41c34a229b3eb7ad05 274 Pfam PF01774 UreD urease accessory protein 50 248 2.1E-49 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 Thivi_3853 ce575edfbc6220d3aecb65d834bae30e 238 Gene3D G3DSA:3.40.91.100 105 237 5.6E-12 T 13-10-2018 Thivi_3853 ce575edfbc6220d3aecb65d834bae30e 238 SUPERFAMILY SSF52980 122 235 5.63E-20 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3853 ce575edfbc6220d3aecb65d834bae30e 238 Pfam PF04471 Restriction endonuclease 118 235 7.3E-27 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Thivi_1842 69996aa784458da6432da76b2eba9c36 491 Pfam PF02347 Glycine cleavage system P-protein 26 387 2.3E-10 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Thivi_1842 69996aa784458da6432da76b2eba9c36 491 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 56.104 T 13-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Thivi_1842 69996aa784458da6432da76b2eba9c36 491 Gene3D G3DSA:3.40.640.10 77 335 7.3E-58 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_1842 69996aa784458da6432da76b2eba9c36 491 Gene3D G3DSA:3.90.1150.10 336 466 5.5E-43 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Thivi_1842 69996aa784458da6432da76b2eba9c36 491 SUPERFAMILY SSF53383 3 480 7.92E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_1571 88a46828be72ec2806338444053036b3 118 SMART SM00961 18 115 4.6E-50 T 13-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1571 88a46828be72ec2806338444053036b3 118 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 19 114 8.5E-39 T 13-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1571 88a46828be72ec2806338444053036b3 118 SUPERFAMILY SSF55239 12 115 5.63E-43 T 13-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_1571 88a46828be72ec2806338444053036b3 118 Gene3D G3DSA:3.30.190.10 1 116 3.6E-44 T 13-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Thivi_0926 b9e839bd20c52988205c0527609e95a9 198 Gene3D G3DSA:3.40.50.150 6 188 4.6E-15 T 13-10-2018 Thivi_0926 b9e839bd20c52988205c0527609e95a9 198 Pfam PF13649 Methyltransferase domain 53 141 3.7E-8 T 13-10-2018 Thivi_0926 b9e839bd20c52988205c0527609e95a9 198 SUPERFAMILY SSF53335 30 141 8.59E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_4389 47dfb0e73e3451e57c68e454fd475994 108 SUPERFAMILY SSF46955 2 67 2.38E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily Thivi_4389 47dfb0e73e3451e57c68e454fd475994 108 Gene3D G3DSA:1.10.10.10 1 72 6.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4389 47dfb0e73e3451e57c68e454fd475994 108 Pfam PF02316 Mu DNA-binding domain 9 59 2.0E-13 T 13-10-2018 IPR003314 Mu-type HTH domain GO:0003677 Thivi_3563 1710701b1dda71d65f720f827f271c65 382 Pfam PF01498 Transposase 30 75 4.6E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_3563 1710701b1dda71d65f720f827f271c65 382 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.4E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_3563 1710701b1dda71d65f720f827f271c65 382 Pfam PF13586 Transposase DDE domain 327 376 3.6E-8 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_3563 1710701b1dda71d65f720f827f271c65 382 SUPERFAMILY SSF46689 15 70 7.53E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2223 1bcb312b3e72edfaab213c6550cb3a06 285 Pfam PF02517 CAAX protease self-immunity 118 234 2.1E-13 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Thivi_4235 36ba39ed4bcb38a5ed910047fba43179 753 Pfam PF00092 von Willebrand factor type A domain 565 720 4.2E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_4235 36ba39ed4bcb38a5ed910047fba43179 753 SUPERFAMILY SSF53300 563 748 9.05E-22 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4235 36ba39ed4bcb38a5ed910047fba43179 753 Gene3D G3DSA:3.40.50.410 557 743 1.2E-16 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4235 36ba39ed4bcb38a5ed910047fba43179 753 SMART SM00327 562 752 1.3E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 Pfam PF13531 Bacterial extracellular solute-binding protein 24 248 6.6E-47 T 13-10-2018 Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 PIRSF PIRSF004846 4 249 1.3E-51 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 SUPERFAMILY SSF53850 22 248 7.41E-61 T 13-10-2018 Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 Gene3D G3DSA:3.40.190.10 103 209 2.9E-81 T 13-10-2018 Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 246 7.6E-74 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Thivi_2523 8d98fd32db820a3ac313157ef05c9ccc 249 Gene3D G3DSA:3.40.190.10 28 247 2.9E-81 T 13-10-2018 Thivi_0172 ec9559a9d072869994c5365643abf862 109 SUPERFAMILY SSF52980 4 86 8.04E-7 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2422 dd0cadc640e18b3c6f99afa528d8c77c 272 Pfam PF05598 Transposase domain (DUF772) 82 148 3.8E-8 T 13-10-2018 IPR008490 Transposase InsH, N-terminal Thivi_3199 ce16aa11a66b7fafec1e7431a0b38cf1 402 SUPERFAMILY SSF54106 33 81 4.32E-8 T 13-10-2018 Thivi_3199 ce16aa11a66b7fafec1e7431a0b38cf1 402 SMART SM00257 34 82 5.8E-6 T 13-10-2018 IPR018392 LysM domain Thivi_3199 ce16aa11a66b7fafec1e7431a0b38cf1 402 Pfam PF01476 LysM domain 35 81 4.0E-14 T 13-10-2018 IPR018392 LysM domain Thivi_3199 ce16aa11a66b7fafec1e7431a0b38cf1 402 Gene3D G3DSA:3.10.350.10 33 80 9.4E-16 T 13-10-2018 IPR036779 LysM domain superfamily Thivi_1339 be065c10e174b5e5cf218765d24be532 226 SMART SM00382 29 214 1.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_1339 be065c10e174b5e5cf218765d24be532 226 Gene3D G3DSA:3.40.50.300 2 225 2.3E-67 T 13-10-2018 Thivi_1339 be065c10e174b5e5cf218765d24be532 226 SUPERFAMILY SSF52540 5 222 2.18E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1339 be065c10e174b5e5cf218765d24be532 226 Pfam PF00005 ABC transporter 21 164 1.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_1339 be065c10e174b5e5cf218765d24be532 226 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 Gene3D G3DSA:1.10.760.10 104 193 3.7E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 113 188 2.4E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 32 96 2.1E-6 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 SUPERFAMILY SSF46626 108 191 6.09E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 SUPERFAMILY SSF46626 31 98 4.81E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1726 3fc1d23c261cb2bd207ea5ea1de1bbf2 193 Gene3D G3DSA:1.10.760.10 27 101 6.8E-20 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1065 49517a14c7133e4f83e8308de301bd9e 173 SUPERFAMILY SSF52833 30 170 6.03E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1065 49517a14c7133e4f83e8308de301bd9e 173 Pfam PF00578 AhpC/TSA family 36 148 6.4E-33 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Thivi_1065 49517a14c7133e4f83e8308de301bd9e 173 Gene3D G3DSA:3.40.30.10 22 171 2.7E-45 T 13-10-2018 Thivi_1065 49517a14c7133e4f83e8308de301bd9e 173 ProSitePatterns PS00194 Thioredoxin family active site. 61 79 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_0680 66b6ece035477e60bece9c4a007e35bb 134 Pfam PF00816 H-NS histone family 19 110 9.7E-12 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 Gene3D G3DSA:3.40.50.2300 2 127 2.0E-38 T 13-10-2018 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 SUPERFAMILY SSF46894 142 235 4.54E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 Pfam PF00072 Response regulator receiver domain 7 117 1.8E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 Gene3D G3DSA:1.10.10.10 128 240 2.5E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 SMART SM00862 158 234 4.5E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 SMART SM00448 5 117 2.9E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 SUPERFAMILY SSF52172 4 131 4.13E-43 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3860 138e18b83ec54186bd83892f6be7b13f 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 234 1.1E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_2184 845bfec869ea05716f85a614baa00089 81 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 57 67 - T 13-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 Thivi_2184 845bfec869ea05716f85a614baa00089 81 Pfam PF01722 BolA-like protein 21 74 1.6E-16 T 13-10-2018 IPR002634 BolA protein Thivi_2184 845bfec869ea05716f85a614baa00089 81 Gene3D G3DSA:3.30.300.90 1 80 3.2E-26 T 13-10-2018 Thivi_2184 845bfec869ea05716f85a614baa00089 81 SUPERFAMILY SSF82657 3 76 1.96E-23 T 13-10-2018 IPR036065 BolA-like superfamily Thivi_2184 845bfec869ea05716f85a614baa00089 81 PIRSF PIRSF003113 2 79 6.9E-20 T 13-10-2018 IPR002634 BolA protein Thivi_3126 7b7a23d16c9ad17c0036b3699d9f404c 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 23 103 3.4E-30 T 13-10-2018 IPR003849 Preprotein translocase YajC Thivi_3126 7b7a23d16c9ad17c0036b3699d9f404c 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 2.8E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC Thivi_3126 7b7a23d16c9ad17c0036b3699d9f404c 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 2.8E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC Thivi_3126 7b7a23d16c9ad17c0036b3699d9f404c 111 Pfam PF02699 Preprotein translocase subunit 26 100 4.8E-29 T 13-10-2018 IPR003849 Preprotein translocase YajC Thivi_3126 7b7a23d16c9ad17c0036b3699d9f404c 111 SMART SM01323 21 103 8.9E-42 T 13-10-2018 IPR003849 Preprotein translocase YajC Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 SUPERFAMILY SSF52540 910 1130 1.03E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 Pfam PF00176 SNF2 family N-terminal domain 938 1200 3.0E-57 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 Gene3D G3DSA:3.40.50.10810 924 1131 9.2E-62 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 SUPERFAMILY SSF52540 1132 1365 2.49E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 SMART SM00490 1240 1322 3.5E-22 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 Gene3D G3DSA:3.40.50.300 1137 1336 3.2E-78 T 13-10-2018 Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 Pfam PF00271 Helicase conserved C-terminal domain 1214 1322 8.4E-20 T 13-10-2018 IPR001650 Helicase, C-terminal Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 SMART SM00487 919 1102 2.8E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Thivi_0106 8297f6605c9091a7b412ee014433e4a8 1379 Gene3D G3DSA:1.20.120.850 1152 1360 3.2E-78 T 13-10-2018 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 Gene3D G3DSA:2.40.50.140 1 124 4.4E-62 T 13-10-2018 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.6E-69 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 SUPERFAMILY SSF50249 3 123 6.28E-51 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.6E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 PIRSF PIRSF002133 1 124 2.3E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.009 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4196 ca37ea428c759b7f9e422462c341cd8d 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.7E-42 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1938 05954a82f600f824bf36406e9d9bdb17 99 Gene3D G3DSA:3.40.1440.10 1 97 3.5E-29 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_1938 05954a82f600f824bf36406e9d9bdb17 99 Pfam PF01541 GIY-YIG catalytic domain 4 74 3.4E-14 T 13-10-2018 IPR000305 GIY-YIG endonuclease Thivi_1938 05954a82f600f824bf36406e9d9bdb17 99 SUPERFAMILY SSF82771 1 74 9.29E-11 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Thivi_0732 b467f2a183edf4b444a2fee64819bd33 220 SUPERFAMILY SSF52540 9 219 3.15E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0732 b467f2a183edf4b444a2fee64819bd33 220 Gene3D G3DSA:3.40.50.300 10 171 6.0E-6 T 13-10-2018 Thivi_0732 b467f2a183edf4b444a2fee64819bd33 220 Pfam PF03567 Sulfotransferase family 3 213 7.0E-11 T 13-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 Thivi_3501 44711d7ccbd4426a08568070e9f5e765 177 Gene3D G3DSA:3.40.960.10 30 162 6.9E-47 T 13-10-2018 Thivi_3501 44711d7ccbd4426a08568070e9f5e765 177 SUPERFAMILY SSF52980 12 152 9.65E-52 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3501 44711d7ccbd4426a08568070e9f5e765 177 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 12 127 1.8E-43 T 13-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Thivi_3501 44711d7ccbd4426a08568070e9f5e765 177 Pfam PF03852 DNA mismatch endonuclease Vsr 12 83 1.8E-32 T 13-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 Gene3D G3DSA:1.25.40.10 14 132 2.9E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 Pfam PF13432 Tetratricopeptide repeat 29 84 1.5E-8 T 13-10-2018 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 SUPERFAMILY SSF48452 26 123 1.47E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 SMART SM00028 23 56 61.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 SMART SM00028 57 90 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1728 fab9901b6a89956c6174a9e4c491f284 148 SMART SM00028 91 124 47.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_1266 b3a11390f8ea6dd3850fa761567e632d 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 22 447 1.5E-48 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Thivi_1266 b3a11390f8ea6dd3850fa761567e632d 447 Gene3D G3DSA:2.40.160.60 26 447 2.0E-116 T 13-10-2018 Thivi_1266 b3a11390f8ea6dd3850fa761567e632d 447 SUPERFAMILY SSF56935 27 447 1.04E-62 T 13-10-2018 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.145 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 Pfam PF01165 Ribosomal protein S21 3 56 9.9E-22 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 Gene3D G3DSA:1.20.5.1150 16 54 3.6E-21 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.3E-24 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_4081 86be7fc246d25108e5177855e87d97b2 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 3.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0585 3460411f2a518515e71c24b9bf52310d 496 Gene3D G3DSA:1.10.8.60 398 463 2.8E-14 T 13-10-2018 Thivi_0585 3460411f2a518515e71c24b9bf52310d 496 SUPERFAMILY SSF52540 228 466 4.62E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0585 3460411f2a518515e71c24b9bf52310d 496 Gene3D G3DSA:3.40.50.300 223 397 2.0E-39 T 13-10-2018 Thivi_0585 3460411f2a518515e71c24b9bf52310d 496 SMART SM00382 263 399 1.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0585 3460411f2a518515e71c24b9bf52310d 496 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 267 396 7.8E-28 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Gene3D G3DSA:3.10.20.310 215 291 2.0E-17 T 13-10-2018 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Pfam PF17243 POTRA domain TamA domain 1 47 128 1.4E-16 T 13-10-2018 IPR035243 TamA, POTRA domain 1 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Pfam PF01103 Surface antigen 389 597 2.4E-32 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Gene3D G3DSA:3.10.20.310 130 214 1.3E-11 T 13-10-2018 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Gene3D G3DSA:3.10.20.310 45 129 7.0E-7 T 13-10-2018 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Pfam PF07244 Surface antigen variable number repeat 215 284 6.8E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Thivi_4583 aa225893160abc5af4867a2f73dcf7bd 613 Gene3D G3DSA:2.40.160.50 292 613 1.2E-85 T 13-10-2018 Thivi_0299 4a25cbc3401183268232e74d5bbef972 226 SUPERFAMILY SSF109755 22 220 3.01E-9 T 13-10-2018 Thivi_0299 4a25cbc3401183268232e74d5bbef972 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 7 225 4.3E-40 T 13-10-2018 IPR002727 Protein of unknown function DUF47 Thivi_0299 4a25cbc3401183268232e74d5bbef972 226 Gene3D G3DSA:1.20.58.220 2 226 4.4E-56 T 13-10-2018 IPR038078 PhoU-like domain superfamily Thivi_0299 4a25cbc3401183268232e74d5bbef972 226 Pfam PF01865 Protein of unknown function DUF47 9 224 6.4E-47 T 13-10-2018 IPR018445 Putative phosphate transport regulator Thivi_2867 af50a7bb0c129847d4d391b0daf0e63a 204 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 78 197 2.6E-23 T 13-10-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b Thivi_3321 6e2ee43813d3b8ae146a4563296116cc 138 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 14 121 5.0E-10 T 13-10-2018 IPR020358 Uncharacterised protein family Y4oB Thivi_4520 aac96b0a3d8412812146c6254777bb50 649 Pfam PF12469 CRISPR-associated protein 8 107 4.5E-19 T 13-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal Thivi_4520 aac96b0a3d8412812146c6254777bb50 649 Gene3D G3DSA:3.30.70.2220 1 236 4.1E-28 T 13-10-2018 IPR038242 Cmr2, N-terminal domain superfamily Thivi_4520 aac96b0a3d8412812146c6254777bb50 649 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 201 474 9.5E-31 T 13-10-2018 IPR013407 CRISPR-associated protein Cmr2 Thivi_4520 aac96b0a3d8412812146c6254777bb50 649 Gene3D G3DSA:3.30.70.2230 357 502 3.2E-39 T 13-10-2018 Thivi_3027 a27affc959828dbe070c208316f51aba 258 SUPERFAMILY SSF56601 22 236 1.52E-36 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_3027 a27affc959828dbe070c208316f51aba 258 Pfam PF00905 Penicillin binding protein transpeptidase domain 55 251 1.7E-30 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_3027 a27affc959828dbe070c208316f51aba 258 Gene3D G3DSA:3.40.710.10 17 258 8.9E-81 T 13-10-2018 Thivi_0807 eb6ea625f0d843c2d568fadc94cc574e 163 Pfam PF03928 Haem-degrading 31 152 2.1E-23 T 13-10-2018 IPR005624 Haem-degrading Thivi_0807 eb6ea625f0d843c2d568fadc94cc574e 163 SUPERFAMILY SSF143744 27 155 1.57E-26 T 13-10-2018 IPR038084 GlcG-like domain superfamily Thivi_0807 eb6ea625f0d843c2d568fadc94cc574e 163 Gene3D G3DSA:3.30.450.150 32 157 1.3E-30 T 13-10-2018 IPR038084 GlcG-like domain superfamily Thivi_4049 6af90c8de6a58f31642c9a9d4b1a2d94 356 Pfam PF14307 Glycosyltransferase WbsX 7 350 9.9E-136 T 13-10-2018 IPR032719 Glycosyltransferase WbsX Thivi_3912 2b726612f5f235d0e132280f76391d41 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 117 2.2E-39 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3912 2b726612f5f235d0e132280f76391d41 118 Gene3D G3DSA:1.20.58.1610 1 118 4.3E-45 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3912 2b726612f5f235d0e132280f76391d41 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.471 T 13-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Thivi_2735 15869a77d5713b4cd1b3fa42e3110c9a 70 PIRSF PIRSF037676 1 70 1.3E-20 T 13-10-2018 IPR007774 Putative nitrogen fixation protein Thivi_2735 15869a77d5713b4cd1b3fa42e3110c9a 70 Pfam PF05082 Rop-like 4 67 4.9E-26 T 13-10-2018 IPR007774 Putative nitrogen fixation protein Thivi_2735 15869a77d5713b4cd1b3fa42e3110c9a 70 Gene3D G3DSA:1.10.287.660 2 69 9.5E-11 T 13-10-2018 IPR029012 Helix hairpin bin domain superfamily Thivi_4532 02e70a1c72a25023e5eb62c96e6dc7f4 240 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 106 117 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_4532 02e70a1c72a25023e5eb62c96e6dc7f4 240 Pfam PF13247 4Fe-4S dicluster domain 66 167 1.5E-23 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4532 02e70a1c72a25023e5eb62c96e6dc7f4 240 Pfam PF12800 4Fe-4S binding domain 11 24 0.027 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_4532 02e70a1c72a25023e5eb62c96e6dc7f4 240 Gene3D G3DSA:3.30.70.20 1 238 2.6E-65 T 13-10-2018 Thivi_4532 02e70a1c72a25023e5eb62c96e6dc7f4 240 SUPERFAMILY SSF54862 1 208 1.88E-69 T 13-10-2018 Thivi_4231 a1673b7df7752d5df39eb868bbf78c90 160 Pfam PF11159 Protein of unknown function (DUF2939) 8 96 1.4E-18 T 13-10-2018 IPR021330 Protein of unknown function DUF2939 Thivi_1331 9b9b8a3155c0a19188a6afade1edb810 354 SMART SM00471 23 158 3.1E-16 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_1331 9b9b8a3155c0a19188a6afade1edb810 354 Pfam PF01966 HD domain 27 149 1.5E-21 T 13-10-2018 IPR006674 HD domain Thivi_1331 9b9b8a3155c0a19188a6afade1edb810 354 SUPERFAMILY SSF109604 18 187 1.03E-39 T 13-10-2018 Thivi_1331 9b9b8a3155c0a19188a6afade1edb810 354 TIGRFAM TIGR00277 HDIG: HDIG domain 25 117 3.0E-10 T 13-10-2018 IPR006675 HDIG domain Thivi_1331 9b9b8a3155c0a19188a6afade1edb810 354 Gene3D G3DSA:1.10.3210.10 8 194 1.3E-67 T 13-10-2018 Thivi_0089 3f95302dfe5d6f17d4fb45a75494294c 364 Gene3D G3DSA:1.20.58.1130 6 208 1.5E-90 T 13-10-2018 Thivi_0089 3f95302dfe5d6f17d4fb45a75494294c 364 Pfam PF01699 Sodium/calcium exchanger protein 3 142 2.9E-29 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Thivi_0089 3f95302dfe5d6f17d4fb45a75494294c 364 Pfam PF01699 Sodium/calcium exchanger protein 177 319 3.1E-28 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Thivi_0089 3f95302dfe5d6f17d4fb45a75494294c 364 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 314 9.0E-84 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Thivi_0089 3f95302dfe5d6f17d4fb45a75494294c 364 Gene3D G3DSA:1.20.1420.30 33 312 1.5E-90 T 13-10-2018 Thivi_1072 18c1e7f199527f04d5a8c8d52d27ad90 98 Gene3D G3DSA:3.30.70.240 1 81 2.4E-17 T 13-10-2018 Thivi_1072 18c1e7f199527f04d5a8c8d52d27ad90 98 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 3 93 1.6E-26 T 13-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Thivi_1072 18c1e7f199527f04d5a8c8d52d27ad90 98 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 4 93 4.3E-25 T 13-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 SUPERFAMILY SSF81342 10 286 2.67E-98 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 Pfam PF00033 Cytochrome b/b6/petB 27 214 9.3E-70 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 PIRSF PIRSF038885 1 414 7.2E-166 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 284 390 1.3E-41 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 Gene3D G3DSA:1.20.810.10 1 414 2.6E-158 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Thivi_3745 8bbdc119910d130d1385eca7921a0f43 414 SUPERFAMILY SSF81648 287 408 3.27E-30 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Thivi_3162 d81c377d5085e3e55c5d259b5527e68e 183 SUPERFAMILY SSF53271 15 181 1.62E-37 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_3162 d81c377d5085e3e55c5d259b5527e68e 183 Pfam PF00156 Phosphoribosyl transferase domain 26 138 4.6E-18 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Thivi_3162 d81c377d5085e3e55c5d259b5527e68e 183 Gene3D G3DSA:3.40.50.2020 4 182 6.7E-45 T 13-10-2018 Thivi_0989 12b1ed8261aff5ddef7b1dd2d2fb0cb1 608 Gene3D G3DSA:3.40.50.12780 3 322 1.1E-55 T 13-10-2018 Thivi_0989 12b1ed8261aff5ddef7b1dd2d2fb0cb1 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 13-10-2018 IPR020845 AMP-binding, conserved site Thivi_0989 12b1ed8261aff5ddef7b1dd2d2fb0cb1 608 Pfam PF00501 AMP-binding enzyme 25 476 1.2E-93 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Thivi_0989 12b1ed8261aff5ddef7b1dd2d2fb0cb1 608 SUPERFAMILY SSF56801 17 599 6.02E-117 T 13-10-2018 Thivi_0989 12b1ed8261aff5ddef7b1dd2d2fb0cb1 608 Gene3D G3DSA:3.40.50.12780 331 472 7.1E-38 T 13-10-2018 Thivi_2251 1f8b8543fff10f5e426b5614a5921c97 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 293 1.0E-10 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Thivi_2251 1f8b8543fff10f5e426b5614a5921c97 305 PIRSF PIRSF028561 1 305 8.3E-105 T 13-10-2018 IPR014548 Predicted acyltransferase Thivi_2529 0b757516c07031b9f658a1ef3557f777 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 1.0E-22 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Thivi_2529 0b757516c07031b9f658a1ef3557f777 128 TIGRFAM TIGR00494 crcB: protein CrcB 9 122 8.5E-33 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Thivi_2529 0b757516c07031b9f658a1ef3557f777 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 18.428 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Thivi_2590 1584e8a5a28707928e26f3853b1e3113 164 Gene3D G3DSA:2.40.10.330 73 123 1.0E-32 T 13-10-2018 Thivi_2590 1584e8a5a28707928e26f3853b1e3113 164 SUPERFAMILY SSF54534 6 142 4.12E-22 T 13-10-2018 Thivi_2590 1584e8a5a28707928e26f3853b1e3113 164 Gene3D G3DSA:3.10.50.40 7 150 1.0E-32 T 13-10-2018 Thivi_2590 1584e8a5a28707928e26f3853b1e3113 164 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 74 1.4E-4 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_2295 dacc510ffb13354520cf34174a58210c 129 Pfam PF14107 Domain of unknown function (DUF4280) 5 123 2.9E-31 T 13-10-2018 IPR025460 Protein of unknown function DUF4280 Thivi_0308 8ba137d524460883055d722b76d0105e 122 SUPERFAMILY SSF52172 3 120 1.32E-35 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0308 8ba137d524460883055d722b76d0105e 122 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0308 8ba137d524460883055d722b76d0105e 122 Gene3D G3DSA:3.40.50.12740 1 121 6.2E-37 T 13-10-2018 Thivi_0308 8ba137d524460883055d722b76d0105e 122 SMART SM00448 3 116 2.0E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0379 9efb48c80dc00ea5eaf8ab285a7f037d 72 SUPERFAMILY SSF75708 1 71 2.75E-9 T 13-10-2018 Thivi_0379 9efb48c80dc00ea5eaf8ab285a7f037d 72 Pfam PF04344 Chemotaxis phosphatase, CheZ 1 72 7.1E-13 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 SUPERFAMILY SSF56300 33 315 3.98E-78 T 13-10-2018 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 Pfam PF02872 5'-nucleotidase, C-terminal domain 322 470 4.4E-37 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 Gene3D G3DSA:3.90.780.10 321 503 2.3E-49 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 375 398 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 259 279 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 212 229 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 231 254 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 444 463 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 PRINTS PR01607 Apyrase family signature 32 50 8.6E-33 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 Pfam PF00149 Calcineurin-like phosphoesterase 35 247 3.7E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 SUPERFAMILY SSF55816 318 505 3.66E-48 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Thivi_1901 c857756dfb634ced5e89e8690c610208 509 Gene3D G3DSA:3.60.21.10 27 319 5.8E-85 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_2080 d84eef757ff44bb0489672026a69aced 209 SUPERFAMILY SSF52540 4 197 5.03E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2080 d84eef757ff44bb0489672026a69aced 209 PIRSF PIRSF005624 2 207 2.2E-51 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Thivi_2080 d84eef757ff44bb0489672026a69aced 209 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 179 2.1E-40 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Thivi_2080 d84eef757ff44bb0489672026a69aced 209 Gene3D G3DSA:3.40.50.300 7 202 1.2E-52 T 13-10-2018 Thivi_2080 d84eef757ff44bb0489672026a69aced 209 Hamap MF_01389 Urease accessory protein UreG [ureG]. 5 203 48.792 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Thivi_2080 d84eef757ff44bb0489672026a69aced 209 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 7 198 2.2E-106 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 Thivi_2671 ad1e698b85c739385dc39cbb63bcfca9 100 SUPERFAMILY SSF141371 4 95 5.89E-7 T 13-10-2018 Thivi_2671 ad1e698b85c739385dc39cbb63bcfca9 100 Gene3D G3DSA:2.40.10.220 5 100 2.4E-7 T 13-10-2018 Thivi_2671 ad1e698b85c739385dc39cbb63bcfca9 100 Pfam PF07238 PilZ domain 4 98 2.2E-11 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 187 1.5E-49 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 PIRSF PIRSF006305 3 195 8.7E-48 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 Pfam PF02545 Maf-like protein 6 189 3.5E-53 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 Hamap MF_00528 Septum formation protein Maf [maf]. 6 194 31.476 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 SUPERFAMILY SSF52972 5 188 3.34E-57 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_4099 db5f8c584511c40c5fe2c741d73bb02b 200 Gene3D G3DSA:3.90.950.10 5 193 4.9E-64 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Thivi_1031 64f6a3ab214b66a8edeb7f40584f9f40 171 Pfam PF03477 ATP cone domain 50 136 7.4E-18 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Thivi_1031 64f6a3ab214b66a8edeb7f40584f9f40 171 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 85.995 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Thivi_1031 64f6a3ab214b66a8edeb7f40584f9f40 171 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.4E-63 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Thivi_4516 ed2dc2feaf6927298b9f5a302961d11d 246 ProDom PD089226 MA1928 MM0560 MJ0978 93 224 5.0E-7 T 13-10-2018 IPR020209 Cas6b, C-terminal domain Thivi_4516 ed2dc2feaf6927298b9f5a302961d11d 246 Pfam PF17262 Family of unknown function (DUF5328) 92 225 1.6E-22 T 13-10-2018 IPR020209 Cas6b, C-terminal domain Thivi_3233 2c2df1f8808c1af2c8974645147fa647 260 Pfam PF02405 Permease MlaE 45 256 3.6E-75 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Thivi_3233 2c2df1f8808c1af2c8974645147fa647 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 16 258 9.4E-85 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Thivi_0979 5db02ae76aa15528d8cb7925912cf414 784 SUPERFAMILY SSF53474 140 453 7.95E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0979 5db02ae76aa15528d8cb7925912cf414 784 Pfam PF11339 Protein of unknown function (DUF3141) 86 630 5.3E-235 T 13-10-2018 IPR024501 Protein of unknown function DUF3141 Thivi_2364 0d0929840c773749c26eed2f43cd4b40 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 60 1.1E-23 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Thivi_2208 6898435433ed74b5f9f3313de6e82680 252 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Thivi_2208 6898435433ed74b5f9f3313de6e82680 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 212 4.8E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0152 1199d28cb359511e8b07693e396cbfc5 127 Pfam PF13559 Domain of unknown function (DUF4129) 47 118 8.7E-6 T 13-10-2018 IPR025403 Domain of unknown function DUF4129 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 64 76 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 158 171 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 110 128 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 94 108 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 239 245 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1193 d07861305f7e11bba70ceb3cca0e97e5 317 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 191 202 7.3E-9 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Thivi_1705 9ebcba5427d725022b72908f8889693d 108 Pfam PF04071 Cysteine-rich small domain 13 74 2.0E-14 T 13-10-2018 IPR007212 Cysteine-rich small domain Thivi_2427 07c287b9be6efd01d0c7c7f1c2c8c5cf 473 Gene3D G3DSA:3.40.50.720 8 303 5.4E-40 T 13-10-2018 Thivi_2427 07c287b9be6efd01d0c7c7f1c2c8c5cf 473 SUPERFAMILY SSF51735 6 261 8.84E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_2427 07c287b9be6efd01d0c7c7f1c2c8c5cf 473 Pfam PF13460 NAD(P)H-binding 13 121 2.6E-11 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_1964 179ef5de87284ca7f1e77de9dfdffed6 245 Pfam PF12679 ABC-2 family transporter protein 54 185 1.6E-7 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Thivi_0861 7543e15fe1f24f4584884325905c89bc 123 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 104 1.4E-15 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_0861 7543e15fe1f24f4584884325905c89bc 123 SUPERFAMILY SSF53146 1 122 2.09E-24 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_0861 7543e15fe1f24f4584884325905c89bc 123 Gene3D G3DSA:3.30.420.130 1 116 5.3E-25 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_1478 d6fe4bcc14676d2a0abdaca737381d28 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 49 1.7E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1478 d6fe4bcc14676d2a0abdaca737381d28 75 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 4 74 4.0E-16 T 13-10-2018 IPR013432 Putative addiction module antidote Thivi_1478 d6fe4bcc14676d2a0abdaca737381d28 75 SUPERFAMILY SSF89447 3 64 2.27E-13 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_1478 d6fe4bcc14676d2a0abdaca737381d28 75 Gene3D G3DSA:2.10.260.10 1 72 4.5E-8 T 13-10-2018 Thivi_1478 d6fe4bcc14676d2a0abdaca737381d28 75 SMART SM00966 7 53 8.3E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_0143 dcad91fae03fcf1230ba84c70566a19e 136 SUPERFAMILY SSF46626 28 128 3.58E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0143 dcad91fae03fcf1230ba84c70566a19e 136 Gene3D G3DSA:1.10.760.10 42 128 2.4E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_1620 3b1fb1503f52ae9ff1760125f5a8b3fa 331 Pfam PF13795 HupE / UreJ protein 149 297 7.3E-50 T 13-10-2018 IPR032809 Putative HupE/UreJ protein Thivi_2055 a099716e5275b67910d3fd86b0855b59 63 Pfam PF01402 Ribbon-helix-helix protein, copG family 7 42 5.4E-6 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Thivi_2055 a099716e5275b67910d3fd86b0855b59 63 SUPERFAMILY SSF47598 5 42 6.11E-7 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_3981 ea1acb22d6a764991b840839ee0bd069 488 Gene3D G3DSA:3.20.110.20 74 466 2.9E-13 T 13-10-2018 Thivi_3981 ea1acb22d6a764991b840839ee0bd069 488 SUPERFAMILY SSF88713 50 465 2.15E-49 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_1066 28c96eb525eb86409ebc205b2710eedc 456 Pfam PF03631 Virulence factor BrkB 47 297 3.1E-45 T 13-10-2018 IPR017039 Virulence factor BrkB Thivi_1066 28c96eb525eb86409ebc205b2710eedc 456 Gene3D G3DSA:1.10.10.10 308 440 1.4E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1066 28c96eb525eb86409ebc205b2710eedc 456 SUPERFAMILY SSF46785 320 437 2.58E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_1066 28c96eb525eb86409ebc205b2710eedc 456 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 40 293 2.7E-38 T 13-10-2018 IPR017039 Virulence factor BrkB Thivi_4091 2894c7508efacfa42104eb38a7b58015 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 5 105 3.9E-20 T 13-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Thivi_4091 2894c7508efacfa42104eb38a7b58015 112 Pfam PF01740 STAS domain 9 106 1.7E-11 T 13-10-2018 IPR002645 STAS domain Thivi_4091 2894c7508efacfa42104eb38a7b58015 112 Gene3D G3DSA:3.30.750.24 3 111 7.4E-29 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_4091 2894c7508efacfa42104eb38a7b58015 112 SUPERFAMILY SSF52091 1 108 9.81E-23 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0123 1f5219e50d4a4f30fcf06c087aeb3219 80 Gene3D G3DSA:1.10.1220.10 3 54 2.9E-5 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Thivi_0123 1f5219e50d4a4f30fcf06c087aeb3219 80 SUPERFAMILY SSF47598 5 46 4.56E-6 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_0830 0142b2bbbff2eed9641c4706cbe51c84 299 Pfam PF13182 Protein of unknown function (DUF4007) 10 294 4.2E-78 T 13-10-2018 IPR025248 Domain of unknown function DUF4007 Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 Pfam PF00556 Antenna complex alpha/beta subunit 18 52 2.3E-5 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 SUPERFAMILY SSF56918 9 52 3.66E-10 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 Gene3D G3DSA:1.20.5.250 9 52 1.1E-18 T 13-10-2018 Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 ProSitePatterns PS00969 Antenna complexes beta subunits signature. 19 50 - T 13-10-2018 IPR023623 Antenna complex, beta subunit, conserved site Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 PRINTS PR00674 Light harvesting protein B chain signature 34 51 2.8E-6 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0274 3ccd04a80806b70a79bc4563fecb3595 52 PRINTS PR00674 Light harvesting protein B chain signature 14 34 2.8E-6 T 13-10-2018 IPR002362 Antenna complex, beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 SMART SM00479 4 197 0.0055 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 SUPERFAMILY SSF53098 4 472 4.42E-114 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 Pfam PF00929 Exonuclease 7 187 4.8E-20 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 Gene3D G3DSA:3.30.420.10 2 195 8.7E-68 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 Gene3D G3DSA:1.20.1280.70 353 414 2.9E-24 T 13-10-2018 Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 Pfam PF08411 Exonuclease C-terminal 206 473 4.1E-92 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 Gene3D G3DSA:2.30.30.450 214 345 4.6E-45 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily Thivi_4321 633fa9da7c1f4babaddc58e10fe17295 479 PIRSF PIRSF000977 1 479 6.0E-195 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 Thivi_1445 a1a25d2e178bddf05600c5bfe319970d 242 Pfam PF08900 Domain of unknown function (DUF1845) 51 239 1.3E-4 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 Thivi_3582 3d412d988beb02899c5dc85400e30b1e 88 SUPERFAMILY SSF143100 3 67 3.01E-12 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_0146 dde1d4fe640b499cd7c05a6c12403eb3 365 Pfam PF01609 Transposase DDE domain 203 360 1.0E-9 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0146 dde1d4fe640b499cd7c05a6c12403eb3 365 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 110 183 1.3E-26 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family Thivi_0146 dde1d4fe640b499cd7c05a6c12403eb3 365 SUPERFAMILY SSF46689 15 70 6.99E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0146 dde1d4fe640b499cd7c05a6c12403eb3 365 Pfam PF01498 Transposase 30 75 4.3E-6 T 13-10-2018 IPR002492 Transposase, Tc1-like GO:0003677|GO:0006313|GO:0015074 Thivi_2482 094e48d18a707f31ec330983296b119d 344 SUPERFAMILY SSF53756 4 343 2.51E-85 T 13-10-2018 Thivi_2482 094e48d18a707f31ec330983296b119d 344 Gene3D G3DSA:3.40.50.2000 170 344 4.4E-40 T 13-10-2018 Thivi_2482 094e48d18a707f31ec330983296b119d 344 Gene3D G3DSA:3.40.50.2000 3 160 2.4E-39 T 13-10-2018 Thivi_2482 094e48d18a707f31ec330983296b119d 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 317 2.5E-37 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 Thivi_0397 6753ed50530fc4bddff38efdabbbee49 225 Pfam PF13861 FlgD Tudor-like domain 87 221 4.7E-13 T 13-10-2018 IPR025963 FlgD Tudor-like domain Thivi_0397 6753ed50530fc4bddff38efdabbbee49 225 Gene3D G3DSA:2.30.30.910 91 221 1.8E-35 T 13-10-2018 Thivi_0397 6753ed50530fc4bddff38efdabbbee49 225 Pfam PF13860 FlgD Ig-like domain 107 180 3.2E-20 T 13-10-2018 IPR025965 FlgD Ig-like domain Thivi_0397 6753ed50530fc4bddff38efdabbbee49 225 Gene3D G3DSA:2.60.40.4070 103 189 1.8E-35 T 13-10-2018 Thivi_0397 6753ed50530fc4bddff38efdabbbee49 225 Pfam PF03963 Flagellar hook capping protein - N-terminal region 19 77 5.1E-23 T 13-10-2018 IPR005648 Flagellar hook capping protein Thivi_2935 67de0dad23183d8291cde447a52b87bd 236 Gene3D G3DSA:3.90.350.10 69 228 4.9E-31 T 13-10-2018 IPR014736 Transposase, Tn5-like, core Thivi_2935 67de0dad23183d8291cde447a52b87bd 236 Pfam PF14706 Transposase DNA-binding 17 64 9.7E-19 T 13-10-2018 IPR014735 Transposase, Tn5-like, N-terminal Thivi_2935 67de0dad23183d8291cde447a52b87bd 236 SUPERFAMILY SSF53098 17 223 4.48E-51 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2935 67de0dad23183d8291cde447a52b87bd 236 Gene3D G3DSA:1.10.246.40 5 65 3.9E-7 T 13-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 Pfam PF00677 Lumazine binding domain 100 184 1.9E-24 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 Pfam PF00677 Lumazine binding domain 3 87 2.1E-20 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 SUPERFAMILY SSF63380 1 88 2.21E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 Gene3D G3DSA:2.40.30.20 1 89 1.5E-26 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 3.6E-62 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 SUPERFAMILY SSF63380 94 194 2.64E-32 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 PIRSF PIRSF000498 1 212 1.6E-71 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Thivi_1033 335cd5168d52ef4427a5372d0bbad789 220 Gene3D G3DSA:2.40.30.20 102 202 9.5E-34 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 SUPERFAMILY SSF52980 9 136 3.49E-24 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 SMART SM00891 11 92 2.8E-9 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 Gene3D G3DSA:3.40.50.10130 3 139 5.8E-33 T 13-10-2018 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 SUPERFAMILY SSF47781 156 204 8.26E-9 T 13-10-2018 IPR010994 RuvA domain 2-like Thivi_4230 638133d27309873cfb4776ac99c17a01 227 Pfam PF14520 Helix-hairpin-helix domain 166 201 9.5E-7 T 13-10-2018 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 Gene3D G3DSA:1.10.150.20 151 212 2.8E-12 T 13-10-2018 Thivi_4230 638133d27309873cfb4776ac99c17a01 227 Pfam PF02732 ERCC4 domain 14 133 1.7E-15 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 Thivi_0865 b93b48bbc81ef382182cf5aec34f3d1f 312 Gene3D G3DSA:3.40.50.1820 17 286 1.3E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0865 b93b48bbc81ef382182cf5aec34f3d1f 312 SUPERFAMILY SSF53474 8 288 6.38E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0865 b93b48bbc81ef382182cf5aec34f3d1f 312 Pfam PF12146 Serine aminopeptidase, S33 69 199 5.3E-15 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 Thivi_2256 61f7987dd3fffc1e77a1af07a5afa72d 147 SUPERFAMILY SSF54637 4 138 7.61E-9 T 13-10-2018 IPR029069 HotDog domain superfamily Thivi_2256 61f7987dd3fffc1e77a1af07a5afa72d 147 Gene3D G3DSA:3.10.129.10 3 140 1.4E-7 T 13-10-2018 Thivi_1025 7ff4ffb8c770e9e5d14628384d06ee5b 215 Gene3D G3DSA:3.10.20.30 127 205 7.2E-12 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_1025 7ff4ffb8c770e9e5d14628384d06ee5b 215 Pfam PF02597 ThiS family 130 203 3.3E-8 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Thivi_1025 7ff4ffb8c770e9e5d14628384d06ee5b 215 Gene3D G3DSA:3.30.2020.30 3 98 1.6E-22 T 13-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Thivi_1025 7ff4ffb8c770e9e5d14628384d06ee5b 215 Pfam PF06155 Protein of unknown function (DUF971) 13 93 3.5E-24 T 13-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Thivi_1025 7ff4ffb8c770e9e5d14628384d06ee5b 215 SUPERFAMILY SSF54285 126 204 9.94E-11 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_3919 f64b1d6f0a96f508a1f72b52769795b6 344 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 214 227 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3919 f64b1d6f0a96f508a1f72b52769795b6 344 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 337 25.701 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3919 f64b1d6f0a96f508a1f72b52769795b6 344 Pfam PF00146 NADH dehydrogenase 17 330 5.9E-129 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1947 8ecbdc62b4b08ee62eae636f36b3d3af 81 SUPERFAMILY SSF143880 5 76 5.49E-19 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_1947 8ecbdc62b4b08ee62eae636f36b3d3af 81 Pfam PF10387 Protein of unknown function (DUF2442) 7 77 4.4E-18 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_1947 8ecbdc62b4b08ee62eae636f36b3d3af 81 Gene3D G3DSA:3.30.2020.10 4 78 5.5E-7 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_0131 e39660073bad0ece7948831e76804a4e 314 Pfam PF00535 Glycosyl transferase family 2 13 119 2.5E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_0131 e39660073bad0ece7948831e76804a4e 314 SUPERFAMILY SSF53448 12 270 1.63E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0131 e39660073bad0ece7948831e76804a4e 314 Gene3D G3DSA:3.90.550.10 6 228 4.8E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2957 e1c3c802eae9b57dbc5eb61e38f15426 114 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 9 96 2.5E-28 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Thivi_2957 e1c3c802eae9b57dbc5eb61e38f15426 114 Pfam PF03334 Na+/H+ antiporter subunit 9 89 1.8E-27 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Thivi_3368 288c35919f237c8bcb9a3a6c59054e5f 527 Pfam PF04262 Glutamate-cysteine ligase 14 383 5.2E-153 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Thivi_3368 288c35919f237c8bcb9a3a6c59054e5f 527 SUPERFAMILY SSF55931 19 519 4.9E-171 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Thivi_3368 288c35919f237c8bcb9a3a6c59054e5f 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 24 521 2.9E-158 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Thivi_3368 288c35919f237c8bcb9a3a6c59054e5f 527 Gene3D G3DSA:3.30.590.20 23 527 2.8E-179 T 13-10-2018 Thivi_3368 288c35919f237c8bcb9a3a6c59054e5f 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 184.252 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Thivi_4288 cae4ad41809b4b83501709c9af76d328 180 Gene3D G3DSA:1.25.40.10 21 171 1.1E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4288 cae4ad41809b4b83501709c9af76d328 180 SUPERFAMILY SSF48452 36 149 1.46E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0285 d4e0898fc3ea567672fcfeaedb8ff184 53 Pfam PF00556 Antenna complex alpha/beta subunit 13 52 3.8E-10 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0285 d4e0898fc3ea567672fcfeaedb8ff184 53 Gene3D G3DSA:4.10.220.20 8 53 1.8E-20 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_0285 d4e0898fc3ea567672fcfeaedb8ff184 53 SUPERFAMILY SSF56918 9 52 5.76E-10 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.447 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.4E-33 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 Gene3D G3DSA:1.10.8.50 1 71 6.8E-28 T 13-10-2018 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 SUPERFAMILY SSF46946 2 114 1.31E-45 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 Gene3D G3DSA:4.10.910.10 72 118 1.1E-25 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.8E-53 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4223 6cf39ddb0c72468d4d82096c8d288e01 118 PIRSF PIRSF002134 1 118 7.3E-42 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_3231 24ec654644510071a922acb7a0eb0af7 206 Pfam PF05494 MlaC protein 35 198 3.1E-54 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Thivi_3231 24ec654644510071a922acb7a0eb0af7 206 PIRSF PIRSF004649 1 205 7.9E-55 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Thivi_3231 24ec654644510071a922acb7a0eb0af7 206 Gene3D G3DSA:3.10.450.710 26 205 1.5E-56 T 13-10-2018 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 PIRSF PIRSF016262 8 215 7.9E-56 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 192 2.9E-62 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 SUPERFAMILY SSF55681 12 205 9.94E-66 T 13-10-2018 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 74 89 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 78 131 2.0E-13 T 13-10-2018 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 162 2.1E-6 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 Gene3D G3DSA:3.30.930.10 5 206 4.7E-62 T 13-10-2018 Thivi_3835 d1aa09a1d3e9bd6ebc840b4d11deb03a 220 Hamap MF_00013 Octanoyltransferase [lipB]. 7 209 36.872 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 274 1.7E-113 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 SMART SM00382 46 242 3.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 Pfam PF00005 ABC transporter 39 190 1.4E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 SUPERFAMILY SSF52540 14 261 5.05E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0968 6a6ee1ff5eefba85193e9f4f34dca1dc 274 Gene3D G3DSA:3.40.50.300 25 273 3.0E-56 T 13-10-2018 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 PIRSF PIRSF000162 5 429 2.5E-174 T 13-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 Gene3D G3DSA:3.40.50.1980 23 424 2.8E-171 T 13-10-2018 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 TIGRFAM TIGR01279 DPOR_bchN: light-independent protochlorophyllide reductase, N subunit 23 426 3.6E-151 T 13-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 Hamap MF_00352 Light-independent protochlorophyllide reductase subunit N [bchN]. 18 428 53.586 T 13-10-2018 IPR005970 Light-independent protochlorophyllide reductase, N subunit GO:0015995|GO:0016730|GO:0019685|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 32 418 1.9E-30 T 13-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 SUPERFAMILY SSF53807 23 424 4.25E-74 T 13-10-2018 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 Gene3D G3DSA:3.40.50.1980 172 296 2.8E-171 T 13-10-2018 Thivi_2410 ddaaa0ca687f2a771dba103614d9c92c 429 Gene3D G3DSA:3.40.50.1980 32 171 2.8E-171 T 13-10-2018 Thivi_3336 db1de91e94b1d4e3cc71115a417df0f0 470 SUPERFAMILY SSF53756 304 422 3.27E-10 T 13-10-2018 Thivi_3336 db1de91e94b1d4e3cc71115a417df0f0 470 Pfam PF05159 Capsule polysaccharide biosynthesis protein 278 414 1.1E-19 T 13-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 Thivi_0306 1b0440655aaf7c0d47c3c3710f3ddf01 385 Gene3D G3DSA:1.10.132.90 37 151 4.3E-6 T 13-10-2018 Thivi_1227 9eabb47a626ceac687cefabc5e1d4f78 70 Pfam PF03683 Uncharacterised protein family (UPF0175) 4 66 9.3E-16 T 13-10-2018 IPR005368 Uncharacterised protein family UPF0175 Thivi_1649 645adca23aa19afdbe08cc114bb30068 403 Gene3D G3DSA:3.40.50.300 9 210 7.8E-21 T 13-10-2018 Thivi_1649 645adca23aa19afdbe08cc114bb30068 403 SUPERFAMILY SSF52540 4 277 1.96E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1856 d5a1c6c86e95b664fe319d3cc21b1f40 62 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 13 46 6.0E-9 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Thivi_0869 f29293651b94fcca6262949f8caf7e91 103 Pfam PF07238 PilZ domain 4 100 6.5E-9 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_0869 f29293651b94fcca6262949f8caf7e91 103 Gene3D G3DSA:2.40.10.220 1 101 3.0E-11 T 13-10-2018 Thivi_0869 f29293651b94fcca6262949f8caf7e91 103 SUPERFAMILY SSF141371 1 98 7.85E-12 T 13-10-2018 Thivi_4630 4967a6516744341e93a6d0b946576406 424 Gene3D G3DSA:3.60.21.10 1 245 1.1E-47 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_4630 4967a6516744341e93a6d0b946576406 424 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 230 7.6E-12 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Thivi_4630 4967a6516744341e93a6d0b946576406 424 SUPERFAMILY SSF56300 1 274 7.59E-49 T 13-10-2018 Thivi_4630 4967a6516744341e93a6d0b946576406 424 PIRSF PIRSF033091 1 420 7.3E-101 T 13-10-2018 IPR014576 Predicted phosphoesterase, YhaO type Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 669 681 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 Pfam PF00343 Carbohydrate phosphorylase 112 824 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 Gene3D G3DSA:3.40.50.2000 482 809 0.0 T 13-10-2018 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 PIRSF PIRSF000460 7 831 3.9E-238 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 SUPERFAMILY SSF53756 18 829 0.0 T 13-10-2018 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 23 824 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Thivi_2113 7957d7fbea082bc7a623cb7894d8570f 831 Gene3D G3DSA:3.40.50.2000 39 826 0.0 T 13-10-2018 Thivi_2486 c79d29f5625cc3ecfca9fd997e1e2288 327 Pfam PF01548 Transposase 4 151 7.5E-27 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Thivi_2486 c79d29f5625cc3ecfca9fd997e1e2288 327 Pfam PF02371 Transposase IS116/IS110/IS902 family 200 285 1.4E-23 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Thivi_1357 9f9c23b071a9f9b2481612e77d49d5d5 466 Gene3D G3DSA:3.40.50.1220 286 465 8.5E-83 T 13-10-2018 Thivi_1357 9f9c23b071a9f9b2481612e77d49d5d5 466 PIRSF PIRSF000204 3 463 3.6E-203 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Thivi_1357 9f9c23b071a9f9b2481612e77d49d5d5 466 SUPERFAMILY SSF52467 291 462 1.58E-71 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Thivi_1357 9f9c23b071a9f9b2481612e77d49d5d5 466 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 458 1.4E-195 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 101 456 2.5E-115 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 Pfam PF00425 chorismate binding enzyme 200 452 5.9E-103 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 PRINTS PR00095 Anthranilate synthase component I signature 394 408 1.2E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 PRINTS PR00095 Anthranilate synthase component I signature 300 313 1.2E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 PRINTS PR00095 Anthranilate synthase component I signature 314 327 1.2E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 PRINTS PR00095 Anthranilate synthase component I signature 409 423 1.2E-17 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 Pfam PF04715 Anthranilate synthase component I, N terminal region 17 154 2.5E-20 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 SUPERFAMILY SSF56322 9 461 5.89E-145 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_3090 2dbeb27ccfc20ff50223a6f67cc4e716 469 Gene3D G3DSA:3.60.120.10 3 462 2.1E-162 T 13-10-2018 IPR005801 ADC synthase GO:0009058 Thivi_2180 c7733167ef81aa804edf0f82d3762d93 99 Gene3D G3DSA:1.20.120.20 3 99 4.2E-7 T 13-10-2018 Thivi_2180 c7733167ef81aa804edf0f82d3762d93 99 SUPERFAMILY SSF58113 9 95 3.66E-5 T 13-10-2018 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 166 184 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 360 377 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 194 209 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 403 421 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 380 394 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PRINTS PR01466 Bacterial arginine deiminase signature 14 34 6.7E-47 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 Gene3D G3DSA:1.10.3930.10 80 165 4.5E-146 T 13-10-2018 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 Pfam PF02274 Amidinotransferase 30 421 2.7E-106 T 13-10-2018 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 SUPERFAMILY SSF55909 16 424 7.26E-128 T 13-10-2018 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 Hamap MF_00242 Arginine deiminase [arcA]. 13 424 46.395 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 PIRSF PIRSF006356 9 424 3.1E-129 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Thivi_1392 1ce7a1c74a5e176ddd137e685bf0f36d 426 Gene3D G3DSA:3.75.10.10 18 421 4.5E-146 T 13-10-2018 Thivi_3185 9d22cdfa4c91cb0645824af480792f8c 196 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 8 191 8.5E-71 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Thivi_3185 9d22cdfa4c91cb0645824af480792f8c 196 PIRSF PIRSF006102 3 195 1.1E-54 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_3185 9d22cdfa4c91cb0645824af480792f8c 196 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 191 8.0E-57 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Thivi_2946 b7e4a9e356f895ca81aaba25e83a627f 353 Pfam PF02371 Transposase IS116/IS110/IS902 family 218 296 2.9E-22 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Thivi_2946 b7e4a9e356f895ca81aaba25e83a627f 353 Pfam PF01548 Transposase 13 152 2.0E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Thivi_1395 883f5ab0a2ea029a73b7b26539158e6f 521 Pfam PF12697 Alpha/beta hydrolase family 232 483 3.6E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Thivi_1395 883f5ab0a2ea029a73b7b26539158e6f 521 SUPERFAMILY SSF53474 226 478 9.92E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1395 883f5ab0a2ea029a73b7b26539158e6f 521 Gene3D G3DSA:3.40.50.1820 225 477 1.2E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 Pfam PF00375 Sodium:dicarboxylate symporter family 7 387 2.6E-95 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 67 92 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 179 198 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 315 334 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 280 306 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 342 362 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 37 57 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 1.4E-33 T 13-10-2018 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 SUPERFAMILY SSF118215 9 387 4.18E-89 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_3778 042ba4e651a2501d3cdb237b4e63f2a8 392 Gene3D G3DSA:1.10.3860.10 1 391 7.6E-98 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Thivi_3301 aed678a4e2b4e548e5ca277531428a89 140 Pfam PF04241 Protein of unknown function (DUF423) 31 118 6.0E-26 T 13-10-2018 IPR006696 Protein of unknown function DUF423 Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 SUPERFAMILY SSF82607 9 101 3.66E-33 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 1.4E-32 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 PIRSF PIRSF004555 3 107 2.0E-36 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 Gene3D G3DSA:3.30.1310.10 1 107 2.5E-42 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 Pfam PF02575 YbaB/EbfC DNA-binding family 9 97 6.5E-33 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Thivi_2712 1972a8894e10c648201f5db31de8fff0 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 96 21.39 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Thivi_0420 09e81ba6f69e9e42893daf2a16e4f0ab 478 Gene3D G3DSA:3.40.50.300 2 195 1.6E-23 T 13-10-2018 Thivi_0420 09e81ba6f69e9e42893daf2a16e4f0ab 478 Pfam PF01926 50S ribosome-binding GTPase 8 140 2.3E-14 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0420 09e81ba6f69e9e42893daf2a16e4f0ab 478 Pfam PF11981 Domain of unknown function (DUF3482) 160 460 4.1E-56 T 13-10-2018 IPR021871 Protein of unknown function DUF3482 Thivi_0420 09e81ba6f69e9e42893daf2a16e4f0ab 478 SUPERFAMILY SSF52540 4 166 9.21E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0288 ebf05565d516642417b83462566645e3 133 SUPERFAMILY SSF52833 33 123 1.31E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_0288 ebf05565d516642417b83462566645e3 133 SMART SM01248 41 122 5.0E-43 T 13-10-2018 IPR011649 KaiB domain GO:0048511 Thivi_0288 ebf05565d516642417b83462566645e3 133 Pfam PF07689 KaiB domain 41 121 2.9E-22 T 13-10-2018 IPR011649 KaiB domain GO:0048511 Thivi_0288 ebf05565d516642417b83462566645e3 133 Gene3D G3DSA:3.40.30.10 32 132 8.3E-35 T 13-10-2018 Thivi_0506 5243c783ca9d37c846c4068c84251a91 439 SUPERFAMILY SSF111283 11 438 6.28E-57 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_0506 5243c783ca9d37c846c4068c84251a91 439 Pfam PF01523 Putative modulator of DNA gyrase 29 300 8.2E-16 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_3416 fa93f903fbbbfb89ad1eede8794c46ea 198 SUPERFAMILY SSF52821 48 155 1.44E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_3416 fa93f903fbbbfb89ad1eede8794c46ea 198 SMART SM00450 54 153 1.1E-14 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3416 fa93f903fbbbfb89ad1eede8794c46ea 198 Pfam PF00581 Rhodanese-like domain 61 146 8.5E-9 T 13-10-2018 IPR001763 Rhodanese-like domain Thivi_3416 fa93f903fbbbfb89ad1eede8794c46ea 198 Gene3D G3DSA:3.40.250.10 43 155 4.5E-17 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily Thivi_0666 9dfdb445bc3ed972cc3ac490870dd975 128 Gene3D G3DSA:2.40.10.220 4 97 3.3E-5 T 13-10-2018 Thivi_0666 9dfdb445bc3ed972cc3ac490870dd975 128 Pfam PF07238 PilZ domain 12 82 5.5E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_4050 04a140a781fca79a6f5a168308741b7a 327 SUPERFAMILY SSF53448 15 232 1.2E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4050 04a140a781fca79a6f5a168308741b7a 327 Pfam PF00535 Glycosyl transferase family 2 18 138 3.1E-32 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4050 04a140a781fca79a6f5a168308741b7a 327 Gene3D G3DSA:3.90.550.10 3 245 6.0E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0726 362d34f87ff05693278b2cc0fd8dc095 375 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 349 7.3E-65 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Thivi_0726 362d34f87ff05693278b2cc0fd8dc095 375 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 348 2.5E-88 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Thivi_1176 5d6abf6d6e7c9b74404d901f3ea5d4ec 320 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 312 3.5E-91 T 13-10-2018 IPR007296 Domain of unknown function DUF403 Thivi_0551 36b059546d8c5b1d817424ee78592585 516 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_0551 36b059546d8c5b1d817424ee78592585 516 Pfam PF13183 4Fe-4S dicluster domain 73 159 1.7E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_0551 36b059546d8c5b1d817424ee78592585 516 SUPERFAMILY SSF46548 70 172 1.27E-14 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_0148 9b5274e33e94c6084c71042ba343d7fb 269 Pfam PF13808 DDE_Tnp_1-associated 12 97 1.1E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_0148 9b5274e33e94c6084c71042ba343d7fb 269 Pfam PF01609 Transposase DDE domain 107 225 1.6E-14 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Thivi_0396 a828afa4459e0d7bae1f2ab5fa8c6efa 139 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Thivi_0396 a828afa4459e0d7bae1f2ab5fa8c6efa 139 Pfam PF00460 Flagella basal body rod protein 8 34 8.3E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Thivi_0396 a828afa4459e0d7bae1f2ab5fa8c6efa 139 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 138 9.0E-45 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Thivi_0396 a828afa4459e0d7bae1f2ab5fa8c6efa 139 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 135 6.0E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thivi_1731 274955449356e2b9330e134302492f12 213 SUPERFAMILY SSF55718 27 123 1.33E-6 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_1731 274955449356e2b9330e134302492f12 213 Pfam PF02036 SCP-2 sterol transfer family 20 116 2.9E-11 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Thivi_2979 82b8c3687e2ac261659a0c64d2c20808 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 18 246 4.1E-14 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Thivi_2979 82b8c3687e2ac261659a0c64d2c20808 266 SUPERFAMILY SSF56219 14 256 9.95E-34 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_2979 82b8c3687e2ac261659a0c64d2c20808 266 Gene3D G3DSA:3.60.10.10 12 258 9.5E-38 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Thivi_0822 50c5b375011db1fe6a294bab3ffe9c6d 155 Pfam PF14261 Domain of unknown function (DUF4351) 99 152 8.7E-7 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 Thivi_3624 16290d2b4e326e432c17722d392d648e 385 Gene3D G3DSA:3.40.50.2000 157 332 1.3E-88 T 13-10-2018 Thivi_3624 16290d2b4e326e432c17722d392d648e 385 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.2E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_3624 16290d2b4e326e432c17722d392d648e 385 Pfam PF00534 Glycosyl transferases group 1 174 308 1.7E-20 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3624 16290d2b4e326e432c17722d392d648e 385 Gene3D G3DSA:3.40.50.2000 12 338 1.3E-88 T 13-10-2018 Thivi_3624 16290d2b4e326e432c17722d392d648e 385 SUPERFAMILY SSF53756 11 340 5.1E-58 T 13-10-2018 Thivi_0513 4700487db7e7341290dab42cd1cc3d89 187 Pfam PF07813 LTXXQ motif family protein 45 118 2.8E-6 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Thivi_0513 4700487db7e7341290dab42cd1cc3d89 187 Gene3D G3DSA:1.20.120.1490 45 96 5.6E-6 T 13-10-2018 Thivi_1849 29bf92c2732c7cfe14c3c2756d8182d6 194 Pfam PF14279 HNH endonuclease 82 123 1.9E-10 T 13-10-2018 IPR029471 HNH endonuclease 5 Thivi_1849 29bf92c2732c7cfe14c3c2756d8182d6 194 Gene3D G3DSA:3.30.40.60 59 144 2.7E-18 T 13-10-2018 Thivi_1849 29bf92c2732c7cfe14c3c2756d8182d6 194 SMART SM00507 71 119 2.3E-4 T 13-10-2018 IPR003615 HNH nuclease Thivi_0747 9b33742f1fbadc125c86665af3bc702c 159 Gene3D G3DSA:3.90.1140.10 1 156 5.9E-34 T 13-10-2018 Thivi_0747 9b33742f1fbadc125c86665af3bc702c 159 SUPERFAMILY SSF55144 10 155 1.62E-28 T 13-10-2018 IPR009097 Cyclic phosphodiesterase Thivi_0747 9b33742f1fbadc125c86665af3bc702c 159 Pfam PF13563 2'-5' RNA ligase superfamily 18 137 5.0E-12 T 13-10-2018 Thivi_0747 9b33742f1fbadc125c86665af3bc702c 159 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 15 153 1.9E-24 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Thivi_0747 9b33742f1fbadc125c86665af3bc702c 159 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 155 16.455 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Thivi_2016 3f05366ff20a2c2581f908f97bc235d1 373 SUPERFAMILY SSF159245 66 348 3.4E-56 T 13-10-2018 Thivi_2490 093d56f9fa3c8f61f239821bbada0f0a 294 Gene3D G3DSA:3.30.420.10 121 280 5.7E-9 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_2490 093d56f9fa3c8f61f239821bbada0f0a 294 Pfam PF00665 Integrase core domain 124 237 7.9E-25 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Thivi_2490 093d56f9fa3c8f61f239821bbada0f0a 294 SUPERFAMILY SSF53098 116 279 5.01E-38 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2490 093d56f9fa3c8f61f239821bbada0f0a 294 Pfam PF13276 HTH-like domain 49 99 6.6E-11 T 13-10-2018 IPR025948 HTH-like domain Thivi_4558 8fd05933357d91b7b955cbbed94b01e5 142 Pfam PF06146 Phosphate-starvation-inducible E 49 114 3.3E-12 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 Pfam PF04358 DsrC like protein 4 105 2.2E-33 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 SUPERFAMILY SSF69721 2 105 1.44E-29 T 13-10-2018 IPR025526 DsrC-like domain superfamily Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 PIRSF PIRSF006223 3 109 5.6E-30 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 Gene3D G3DSA:3.30.1420.10 1 39 7.1E-13 T 13-10-2018 Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 Gene3D G3DSA:1.10.10.370 40 107 4.6E-20 T 13-10-2018 Thivi_0539 d3ef6242e163622e751e3dfee72efa81 112 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 105 1.4E-29 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Thivi_3458 45fb40659d1024b1a67cb767a99b61d7 561 Pfam PF03235 Protein of unknown function DUF262 19 229 9.2E-24 T 13-10-2018 IPR004919 Domain of unknown function DUF262 Thivi_2399 9065ddb30c27a1c03fdf8ba69460fa6b 205 TIGRFAM TIGR02019 BchJ: bacteriochlorophyll 4-vinyl reductase 16 203 2.6E-55 T 13-10-2018 IPR010249 Bacteriochlorophyll 4-vinyl reductase GO:0015979|GO:0030494 Thivi_2399 9065ddb30c27a1c03fdf8ba69460fa6b 205 SUPERFAMILY SSF111126 83 205 8.89E-21 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Thivi_2399 9065ddb30c27a1c03fdf8ba69460fa6b 205 Gene3D G3DSA:3.30.1380.20 136 205 3.6E-9 T 13-10-2018 Thivi_2399 9065ddb30c27a1c03fdf8ba69460fa6b 205 SMART SM00989 144 205 4.8E-15 T 13-10-2018 IPR004096 4-vinyl reductase, 4VR Thivi_2399 9065ddb30c27a1c03fdf8ba69460fa6b 205 Pfam PF02830 V4R domain 149 204 9.1E-15 T 13-10-2018 IPR004096 4-vinyl reductase, 4VR Thivi_1629 bdf0a8bc2837ab210029711d4ec2624f 109 Pfam PF04023 FeoA domain 9 77 9.6E-11 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_1629 bdf0a8bc2837ab210029711d4ec2624f 109 Gene3D G3DSA:2.30.30.90 19 77 2.2E-11 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain Thivi_1629 bdf0a8bc2837ab210029711d4ec2624f 109 SUPERFAMILY SSF50037 10 77 5.04E-9 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal Thivi_1629 bdf0a8bc2837ab210029711d4ec2624f 109 SMART SM00899 8 78 1.2E-10 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Thivi_4357 dcf84d0295ec5256d0343b2e7b4898a2 229 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 226 4.8E-50 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Thivi_4357 dcf84d0295ec5256d0343b2e7b4898a2 229 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 212 1.6E-61 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Thivi_4357 dcf84d0295ec5256d0343b2e7b4898a2 229 Gene3D G3DSA:3.40.50.1360 7 229 5.0E-66 T 13-10-2018 Thivi_4357 dcf84d0295ec5256d0343b2e7b4898a2 229 SUPERFAMILY SSF100950 8 228 1.38E-57 T 13-10-2018 IPR037171 NagB/RpiA transferase-like Thivi_3556 ed2ac267ea2f3ebef50410b07a3156e1 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.8E-21 T 13-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Thivi_2493 6927915ea7a01016b27e19a4bd3fd4a7 118 Gene3D G3DSA:2.30.30.110 6 114 8.7E-30 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_2493 6927915ea7a01016b27e19a4bd3fd4a7 118 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 112 3.4E-17 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_2493 6927915ea7a01016b27e19a4bd3fd4a7 118 SUPERFAMILY SSF50118 2 113 1.09E-22 T 13-10-2018 Thivi_1597 f95e42842eaa5fa9fa5a41adf0370855 1064 Pfam PF07916 TraG-like protein, N-terminal region 3 459 2.2E-104 T 13-10-2018 IPR012931 TraG-like, N-terminal Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 Gene3D G3DSA:1.25.40.10 51 151 1.5E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 Pfam PF08238 Sel1 repeat 84 99 2.8 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 Pfam PF08238 Sel1 repeat 100 135 2.3E-6 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 SMART SM00671 100 135 4.8E-5 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 SMART SM00671 68 99 54.0 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_2484 542061de8f882f228d9ae166ce8a949a 158 SUPERFAMILY SSF81901 63 138 2.62E-14 T 13-10-2018 Thivi_0652 dec8c9e2b6a28782efbcd79936b9b1e0 972 Pfam PF09822 ABC-type uncharacterized transport system 277 429 4.5E-27 T 13-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 Thivi_0652 dec8c9e2b6a28782efbcd79936b9b1e0 972 Pfam PF09822 ABC-type uncharacterized transport system 440 689 5.8E-29 T 13-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 Thivi_0652 dec8c9e2b6a28782efbcd79936b9b1e0 972 Pfam PF12679 ABC-2 family transporter protein 57 184 5.6E-11 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Thivi_1178 aa5b60c0a97d2b59ce7d6732a2498f8e 174 Gene3D G3DSA:3.40.50.2300 5 144 1.2E-39 T 13-10-2018 Thivi_1178 aa5b60c0a97d2b59ce7d6732a2498f8e 174 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 141 1.7E-19 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_1178 aa5b60c0a97d2b59ce7d6732a2498f8e 174 SMART SM00226 6 144 1.0E-40 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_1178 aa5b60c0a97d2b59ce7d6732a2498f8e 174 SUPERFAMILY SSF52788 6 144 3.14E-38 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Thivi_4284 356c0b288feabb9ee0168739eeba4c84 375 Gene3D G3DSA:3.40.50.2000 1 350 2.0E-142 T 13-10-2018 Thivi_4284 356c0b288feabb9ee0168739eeba4c84 375 Gene3D G3DSA:3.40.50.2000 172 340 2.0E-142 T 13-10-2018 Thivi_4284 356c0b288feabb9ee0168739eeba4c84 375 SUPERFAMILY SSF53756 1 354 4.85E-128 T 13-10-2018 Thivi_4284 356c0b288feabb9ee0168739eeba4c84 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 7 353 3.5E-124 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Thivi_4284 356c0b288feabb9ee0168739eeba4c84 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 354 3.9E-151 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Thivi_2661 09ec540e369156c14e15319d1ca36e4d 184 SUPERFAMILY SSF46689 31 140 1.16E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2661 09ec540e369156c14e15319d1ca36e4d 184 Pfam PF08765 Mor transcription activator family 70 143 1.4E-8 T 13-10-2018 IPR014875 Mor transcription activator Thivi_3759 ef896efec9f2c81702b0672bd31fe67a 596 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 53 78 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_3759 ef896efec9f2c81702b0672bd31fe67a 596 Gene3D G3DSA:1.10.645.10 2 581 6.5E-267 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3759 ef896efec9f2c81702b0672bd31fe67a 596 SUPERFAMILY SSF56762 11 581 7.59E-181 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3759 ef896efec9f2c81702b0672bd31fe67a 596 Pfam PF00374 Nickel-dependent hydrogenase 53 581 5.3E-230 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_3759 ef896efec9f2c81702b0672bd31fe67a 596 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 572 581 - T 13-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Thivi_3232 4678408afd3e346a583f9e5beaf632fc 156 Pfam PF02470 MlaD protein 40 118 3.5E-23 T 13-10-2018 IPR003399 Mce/MlaD Thivi_3232 4678408afd3e346a583f9e5beaf632fc 156 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 148 5.0E-56 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Thivi_0563 e6d80a02b780680bba0e1fcebdb031fd 138 SUPERFAMILY SSF55874 35 64 1.11E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_0563 e6d80a02b780680bba0e1fcebdb031fd 138 SMART SM00448 11 136 1.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0563 e6d80a02b780680bba0e1fcebdb031fd 138 Pfam PF00072 Response regulator receiver domain 57 136 2.3E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0563 e6d80a02b780680bba0e1fcebdb031fd 138 Gene3D G3DSA:3.40.50.12740 12 138 7.7E-27 T 13-10-2018 Thivi_0563 e6d80a02b780680bba0e1fcebdb031fd 138 SUPERFAMILY SSF52172 56 137 1.57E-24 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_2163 0e2e078dcd3c4fddea40db110b63cb55 315 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 99 127 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Thivi_2163 0e2e078dcd3c4fddea40db110b63cb55 315 SUPERFAMILY SSF53955 74 200 8.0E-36 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_2163 0e2e078dcd3c4fddea40db110b63cb55 315 Gene3D G3DSA:1.10.530.10 75 206 8.5E-35 T 13-10-2018 Thivi_2163 0e2e078dcd3c4fddea40db110b63cb55 315 Pfam PF01464 Transglycosylase SLT domain 83 183 1.8E-25 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_2220 45c9d4dda078be1408f1ee556fc44504 118 SUPERFAMILY SSF101386 4 115 2.26E-35 T 13-10-2018 Thivi_2220 45c9d4dda078be1408f1ee556fc44504 118 PIRSF PIRSF029826 1 116 1.7E-44 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Thivi_2220 45c9d4dda078be1408f1ee556fc44504 118 Pfam PF12643 MazG-like family 36 108 5.5E-13 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Thivi_2220 45c9d4dda078be1408f1ee556fc44504 118 Gene3D G3DSA:1.10.287.1080 2 108 1.4E-37 T 13-10-2018 Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 SUPERFAMILY SSF56935 46 724 6.11E-81 T 13-10-2018 Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 Pfam PF00593 TonB dependent receptor 226 720 4.7E-32 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 170 1.6E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 Gene3D G3DSA:2.40.170.20 180 724 1.5E-63 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 77 724 5.9E-162 T 13-10-2018 IPR010100 TonB-dependent copper receptor Thivi_4452 9225d2f15ac2d89e09a7420941aea22b 724 Gene3D G3DSA:2.170.130.10 62 177 7.2E-10 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_2624 6c7fa3c2d13c919f92a4c244c6f71f1f 147 SUPERFAMILY SSF52540 2 131 4.71E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2624 6c7fa3c2d13c919f92a4c244c6f71f1f 147 Pfam PF13671 AAA domain 4 120 8.4E-10 T 13-10-2018 Thivi_2624 6c7fa3c2d13c919f92a4c244c6f71f1f 147 Gene3D G3DSA:3.40.50.300 1 145 4.7E-31 T 13-10-2018 Thivi_0970 03666befe5e51ed1116267c92f838a54 324 SUPERFAMILY SSF161098 37 307 8.72E-34 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_0970 03666befe5e51ed1116267c92f838a54 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 319 6.6E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_0970 03666befe5e51ed1116267c92f838a54 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 27 312 6.5E-90 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Thivi_0970 03666befe5e51ed1116267c92f838a54 324 Gene3D G3DSA:1.10.3720.10 77 317 1.6E-35 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_1422 717e1ae242315254c6d66d9885a42160 156 Pfam PF00011 Hsp20/alpha crystallin family 42 136 3.6E-19 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Thivi_1422 717e1ae242315254c6d66d9885a42160 156 SUPERFAMILY SSF49764 8 136 5.23E-22 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1422 717e1ae242315254c6d66d9885a42160 156 Gene3D G3DSA:2.60.40.790 33 138 1.3E-22 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_3963 4259b60a9a4f69cadb0452172e7a2863 196 SUPERFAMILY SSF141523 62 194 5.62E-24 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_3963 4259b60a9a4f69cadb0452172e7a2863 196 Gene3D G3DSA:2.40.440.10 32 196 1.7E-20 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_3963 4259b60a9a4f69cadb0452172e7a2863 196 Pfam PF03734 L,D-transpeptidase catalytic domain 62 194 5.5E-18 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_4421 54e05c2f04656dbee0e272ccb6e0135b 80 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 42 76 6.0E-9 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Thivi_2998 718068e3fda4f813c229693816c607a3 455 SUPERFAMILY SSF63411 264 448 8.67E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Thivi_2998 718068e3fda4f813c229693816c607a3 455 Pfam PF00675 Insulinase (Peptidase family M16) 45 190 6.3E-15 T 13-10-2018 IPR011765 Peptidase M16, N-terminal Thivi_2998 718068e3fda4f813c229693816c607a3 455 Gene3D G3DSA:3.30.830.10 36 246 2.5E-49 T 13-10-2018 Thivi_2998 718068e3fda4f813c229693816c607a3 455 SUPERFAMILY SSF63411 32 252 7.51E-45 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Thivi_2998 718068e3fda4f813c229693816c607a3 455 Gene3D G3DSA:3.30.830.10 258 448 6.0E-47 T 13-10-2018 Thivi_2998 718068e3fda4f813c229693816c607a3 455 Pfam PF05193 Peptidase M16 inactive domain 200 375 3.8E-26 T 13-10-2018 IPR007863 Peptidase M16, C-terminal Thivi_2259 b5a17e12d3a29fd873cb630cecc04300 230 Pfam PF02698 DUF218 domain 60 185 2.9E-13 T 13-10-2018 IPR003848 Domain of unknown function DUF218 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Gene3D G3DSA:3.40.710.10 301 496 2.2E-114 T 13-10-2018 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Gene3D G3DSA:3.90.1310.30 65 240 1.5E-42 T 13-10-2018 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 225 3.2E-12 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Gene3D G3DSA:3.30.450.330 241 579 2.2E-114 T 13-10-2018 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 24 590 40.934 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 SUPERFAMILY SSF56601 192 588 1.44E-93 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 265 575 5.5E-78 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Thivi_2324 5d62d3d3f34cb34b0e6ea69eb01c9c4c 601 SUPERFAMILY SSF56519 68 239 2.22E-39 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Thivi_3373 f86c0a5f3061eaf50674dee802dc766e 259 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 81 109 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Thivi_3373 f86c0a5f3061eaf50674dee802dc766e 259 Pfam PF01464 Transglycosylase SLT domain 66 171 1.6E-30 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_3373 f86c0a5f3061eaf50674dee802dc766e 259 Gene3D G3DSA:1.10.530.10 57 197 1.8E-37 T 13-10-2018 Thivi_3373 f86c0a5f3061eaf50674dee802dc766e 259 SUPERFAMILY SSF53955 51 184 2.67E-37 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_1039 c07d9faacc18d13cf040ec5036dfc774 64 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 49 6.0E-15 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Thivi_1039 c07d9faacc18d13cf040ec5036dfc774 64 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 8.8E-20 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Thivi_1363 08e09b37ba87864368d0b62597480538 233 SUPERFAMILY SSF141868 2 224 4.71E-72 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1363 08e09b37ba87864368d0b62597480538 233 Gene3D G3DSA:3.20.20.450 1 224 8.1E-81 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_1363 08e09b37ba87864368d0b62597480538 233 SMART SM00052 1 216 2.3E-72 T 13-10-2018 IPR001633 EAL domain Thivi_1363 08e09b37ba87864368d0b62597480538 233 Pfam PF00563 EAL domain 3 211 1.2E-57 T 13-10-2018 IPR001633 EAL domain Thivi_4152 4bd755d850afe00f8cf43e279daa3b91 362 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 56 347 1.5E-104 T 13-10-2018 IPR011757 Lytic transglycosylase MltB Thivi_4152 4bd755d850afe00f8cf43e279daa3b91 362 Pfam PF13406 Transglycosylase SLT domain 53 345 1.4E-96 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 Thivi_4152 4bd755d850afe00f8cf43e279daa3b91 362 Gene3D G3DSA:1.10.530.10 91 347 4.0E-108 T 13-10-2018 Thivi_4152 4bd755d850afe00f8cf43e279daa3b91 362 Gene3D G3DSA:1.10.8.350 53 223 4.0E-108 T 13-10-2018 Thivi_4152 4bd755d850afe00f8cf43e279daa3b91 362 SUPERFAMILY SSF53955 53 349 1.82E-91 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_2546 7c3c8ea15743e2bbaf9292f9a45aef0a 322 Gene3D G3DSA:1.10.600.10 1 322 5.0E-112 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2546 7c3c8ea15743e2bbaf9292f9a45aef0a 322 Pfam PF00348 Polyprenyl synthetase 32 265 1.8E-76 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Thivi_2546 7c3c8ea15743e2bbaf9292f9a45aef0a 322 SUPERFAMILY SSF48576 6 321 6.88E-99 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2627 3829cf62333100577491d321598f8ca3 193 Pfam PF01169 Uncharacterized protein family UPF0016 12 86 1.9E-21 T 13-10-2018 IPR001727 Gdt1 family Thivi_2627 3829cf62333100577491d321598f8ca3 193 Pfam PF01169 Uncharacterized protein family UPF0016 111 185 3.9E-19 T 13-10-2018 IPR001727 Gdt1 family Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 Gene3D G3DSA:3.50.50.60 122 256 7.8E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 Pfam PF13187 4Fe-4S dicluster domain 556 600 1.4E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 SUPERFAMILY SSF51905 141 528 3.56E-19 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 630 755 9.1E-34 T 13-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 Gene3D G3DSA:3.30.70.20 543 608 2.9E-12 T 13-10-2018 Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 SUPERFAMILY SSF54862 548 616 2.21E-16 T 13-10-2018 Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 164 4.6E-6 T 13-10-2018 Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 434 4.6E-6 T 13-10-2018 Thivi_3113 1ec4c902c460a6749858987b3f27b79f 761 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 586 597 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3953 f28530f16308288856b4704fde87ab70 378 SUPERFAMILY SSF53448 10 189 1.13E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3953 f28530f16308288856b4704fde87ab70 378 Pfam PF00535 Glycosyl transferase family 2 18 181 2.5E-31 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_3953 f28530f16308288856b4704fde87ab70 378 Pfam PF04138 GtrA-like protein 253 371 1.8E-15 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Thivi_3953 f28530f16308288856b4704fde87ab70 378 Gene3D G3DSA:3.90.550.10 1 246 6.0E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2342 e740a076766e63a3169a8e6b6b128c28 157 Gene3D G3DSA:2.60.120.260 61 154 3.9E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_0841 927408c2f14b3be0976603837f9e4b15 285 Gene3D G3DSA:3.90.1570.10 36 155 5.8E-8 T 13-10-2018 Thivi_0841 927408c2f14b3be0976603837f9e4b15 285 Pfam PF05685 Putative restriction endonuclease 38 185 1.3E-25 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_0841 927408c2f14b3be0976603837f9e4b15 285 SUPERFAMILY SSF52980 37 187 2.04E-15 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0470 d1d4b04544a2b41dc23458382ad834ca 327 SUPERFAMILY SSF55347 156 298 7.19E-12 T 13-10-2018 Thivi_0470 d1d4b04544a2b41dc23458382ad834ca 327 Gene3D G3DSA:3.40.50.720 10 295 7.6E-63 T 13-10-2018 Thivi_0470 d1d4b04544a2b41dc23458382ad834ca 327 Gene3D G3DSA:3.30.360.10 127 308 7.6E-63 T 13-10-2018 Thivi_0470 d1d4b04544a2b41dc23458382ad834ca 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 2.5E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Thivi_0470 d1d4b04544a2b41dc23458382ad834ca 327 SUPERFAMILY SSF51735 6 145 3.63E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_3111 0417e615cff26f852a3ee5563aeeb8e9 299 Pfam PF02754 Cysteine-rich domain 6 90 1.1E-6 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_3111 0417e615cff26f852a3ee5563aeeb8e9 299 Pfam PF02754 Cysteine-rich domain 157 244 4.5E-11 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 498 1.7E-187 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 Pfam PF00361 Proton-conducting membrane transporter 131 428 5.9E-77 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 9.3E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 9.3E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 388 414 9.3E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 9.3E-40 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3924 0c6227ce09de0d52df5dab161a167aa3 531 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 61 125 2.0E-7 T 13-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2304 710e953f11700720b86638c1e187e203 245 SMART SM00332 1 240 1.2E-19 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2304 710e953f11700720b86638c1e187e203 245 SMART SM00331 16 242 2.3E-24 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2304 710e953f11700720b86638c1e187e203 245 Pfam PF13672 Protein phosphatase 2C 21 211 3.5E-13 T 13-10-2018 Thivi_2304 710e953f11700720b86638c1e187e203 245 SUPERFAMILY SSF81606 13 241 2.09E-59 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2304 710e953f11700720b86638c1e187e203 245 Gene3D G3DSA:3.60.40.10 9 243 1.5E-58 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Thivi_2311 d8f57b7fccdd2aadecf0bdc7fb831e17 153 Pfam PF05258 Protein of unknown function (DUF721) 8 82 8.3E-8 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 Thivi_1436 4be34e4d6d5cb394cf7a6f97ee792c27 690 Pfam PF00593 TonB dependent receptor 324 689 1.7E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Thivi_1436 4be34e4d6d5cb394cf7a6f97ee792c27 690 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 7.7E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain Thivi_1436 4be34e4d6d5cb394cf7a6f97ee792c27 690 Gene3D G3DSA:2.40.170.20 227 690 1.4E-55 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Thivi_1436 4be34e4d6d5cb394cf7a6f97ee792c27 690 Gene3D G3DSA:2.170.130.10 21 162 3.6E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Thivi_1436 4be34e4d6d5cb394cf7a6f97ee792c27 690 SUPERFAMILY SSF56935 16 690 9.69E-99 T 13-10-2018 Thivi_0027 2be78ec0988c7d475043d6394bd62a89 437 Pfam PF04403 Paraquat-inducible protein A 44 198 1.9E-50 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Thivi_0027 2be78ec0988c7d475043d6394bd62a89 437 Pfam PF04403 Paraquat-inducible protein A 261 417 2.4E-55 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Thivi_3659 509d9a51f744bb12dba8915d4ab76454 464 PRINTS PR00758 Arsenical pump membrane protein signature 381 406 9.8E-6 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3659 509d9a51f744bb12dba8915d4ab76454 464 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 9.8E-6 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3659 509d9a51f744bb12dba8915d4ab76454 464 PRINTS PR00758 Arsenical pump membrane protein signature 414 438 9.8E-6 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3659 509d9a51f744bb12dba8915d4ab76454 464 Pfam PF03600 Citrate transporter 17 350 2.3E-27 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Thivi_1691 587b3d0d78366f5e42c1579fc1963e6a 95 Gene3D G3DSA:1.10.260.40 16 95 6.4E-15 T 13-10-2018 Thivi_1691 587b3d0d78366f5e42c1579fc1963e6a 95 Pfam PF01381 Helix-turn-helix 36 91 2.9E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1691 587b3d0d78366f5e42c1579fc1963e6a 95 SUPERFAMILY SSF47413 29 94 1.1E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1691 587b3d0d78366f5e42c1579fc1963e6a 95 SMART SM00530 34 93 1.6E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_0209 33fb1b657dd688098463af19775500da 211 Gene3D G3DSA:1.10.150.240 14 78 6.4E-38 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_0209 33fb1b657dd688098463af19775500da 211 Gene3D G3DSA:3.40.50.1000 3 196 6.4E-38 T 13-10-2018 IPR023214 HAD superfamily Thivi_0209 33fb1b657dd688098463af19775500da 211 SUPERFAMILY SSF56784 2 204 5.65E-43 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_0209 33fb1b657dd688098463af19775500da 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 175 1.0E-32 T 13-10-2018 Thivi_0209 33fb1b657dd688098463af19775500da 211 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 169 6.9E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Thivi_0547 f5479177f335e7c5e37473cdbfe474e4 136 SUPERFAMILY SSF75169 5 136 2.88E-39 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0547 f5479177f335e7c5e37473cdbfe474e4 136 Gene3D G3DSA:3.40.1260.10 1 136 1.2E-49 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0547 f5479177f335e7c5e37473cdbfe474e4 136 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 7 99 2.5E-32 T 13-10-2018 IPR017462 Sulphur relay, TusC/DsrF Thivi_0547 f5479177f335e7c5e37473cdbfe474e4 136 Pfam PF02635 DsrE/DsrF-like family 6 136 8.8E-28 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Thivi_1866 754c1636e744dc5c82f9fe6b9872d519 111 Pfam PF00462 Glutaredoxin 16 80 4.7E-20 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Thivi_1866 754c1636e744dc5c82f9fe6b9872d519 111 Gene3D G3DSA:3.40.30.10 6 102 1.4E-31 T 13-10-2018 Thivi_1866 754c1636e744dc5c82f9fe6b9872d519 111 SUPERFAMILY SSF52833 1 101 1.6E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1866 754c1636e744dc5c82f9fe6b9872d519 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 3.0E-43 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related Thivi_1866 754c1636e744dc5c82f9fe6b9872d519 111 PIRSF PIRSF005894 1 107 2.6E-45 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Thivi_3146 3d0298a1a7ff7325afb149831e08eb20 156 Gene3D G3DSA:2.40.70.10 17 126 1.4E-5 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_3146 3d0298a1a7ff7325afb149831e08eb20 156 TIGRFAM TIGR03698 clan_AA_DTGF: clan AA aspartic protease, AF_0612 family 7 110 5.2E-17 T 13-10-2018 IPR022274 Peptidase aspartic, AF0612 Thivi_3146 3d0298a1a7ff7325afb149831e08eb20 156 Pfam PF13650 Aspartyl protease 21 66 8.2E-6 T 13-10-2018 Thivi_2411 6eedba8c28a00b4fa1a3187d8a4dc825 173 Pfam PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) 15 152 5.1E-64 T 13-10-2018 IPR009905 2-vinyl bacteriochlorophyllide hydratase GO:0016836|GO:0019685|GO:0030494 Thivi_2411 6eedba8c28a00b4fa1a3187d8a4dc825 173 TIGRFAM TIGR02020 BchF: 2-vinyl bacteriochlorophyllide hydratase 14 155 6.5E-59 T 13-10-2018 IPR009905 2-vinyl bacteriochlorophyllide hydratase GO:0016836|GO:0019685|GO:0030494 Thivi_2067 8f5294d4b6b805fdd8b89270cf0216b3 176 SUPERFAMILY SSF143422 1 139 1.23E-28 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_2067 8f5294d4b6b805fdd8b89270cf0216b3 176 SMART SM01321 9 133 1.1E-28 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_2067 8f5294d4b6b805fdd8b89270cf0216b3 176 Pfam PF01797 Transposase IS200 like 21 131 3.2E-5 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_2067 8f5294d4b6b805fdd8b89270cf0216b3 176 Gene3D G3DSA:3.30.70.1290 1 174 7.1E-43 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_3489 604aad08c407efcfc44c093e3b8d1ab2 332 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 109 327 5.3E-35 T 13-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB Thivi_3209 f983ddbeb4aec89f69321f977a22c854 466 Pfam PF03600 Citrate transporter 48 414 9.4E-55 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Thivi_3781 d4f99a2eab6cb2faa53dc7b9d5e7129b 187 SUPERFAMILY SSF49764 65 178 1.29E-7 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_3781 d4f99a2eab6cb2faa53dc7b9d5e7129b 187 Gene3D G3DSA:2.60.40.790 56 182 4.4E-10 T 13-10-2018 IPR008978 HSP20-like chaperone Thivi_1612 c9e318919c78e82b06fb540c71254c09 90 Gene3D G3DSA:1.10.10.10 1 49 2.3E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_1612 c9e318919c78e82b06fb540c71254c09 90 SUPERFAMILY SSF46689 12 81 5.2E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 Gene3D G3DSA:3.40.630.70 62 234 6.7E-68 T 13-10-2018 Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 36 215 1.4E-66 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 250 98.877 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 SUPERFAMILY SSF55729 7 225 2.12E-91 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 Gene3D G3DSA:2.30.210.20 3 61 1.0E-25 T 13-10-2018 Thivi_0945 f9399b906ea0a91b8a92e61fdf6cdfb9 250 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 205 2.4E-74 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Thivi_2187 511a26e14ba1160180a4d2ae12a38ad1 556 Gene3D G3DSA:3.40.640.10 109 431 1.1E-54 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Thivi_2187 511a26e14ba1160180a4d2ae12a38ad1 556 SUPERFAMILY SSF53383 69 546 5.65E-64 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Thivi_2187 511a26e14ba1160180a4d2ae12a38ad1 556 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 88 447 7.7E-12 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Thivi_3121 089f30808136b3dd57af0e8131bf5fe1 137 Pfam PF02623 FliW protein 13 133 6.6E-30 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Thivi_3121 089f30808136b3dd57af0e8131bf5fe1 137 Gene3D G3DSA:2.30.290.10 2 137 7.4E-32 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Thivi_3121 089f30808136b3dd57af0e8131bf5fe1 137 SUPERFAMILY SSF141457 8 132 1.18E-27 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Thivi_3121 089f30808136b3dd57af0e8131bf5fe1 137 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 10 137 19.031 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Thivi_1438 d09792d20c83de7853d11ccfab3c1dff 310 Gene3D G3DSA:3.40.50.2300 139 276 3.2E-11 T 13-10-2018 Thivi_3809 1fcc15f3fdc953a38c1a968b5f233b90 256 Gene3D G3DSA:3.90.550.10 1 254 3.1E-90 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3809 1fcc15f3fdc953a38c1a968b5f233b90 256 SUPERFAMILY SSF53448 5 249 2.48E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_3809 1fcc15f3fdc953a38c1a968b5f233b90 256 Pfam PF02348 Cytidylyltransferase 7 227 2.0E-58 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Thivi_3809 1fcc15f3fdc953a38c1a968b5f233b90 256 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 5 246 6.7E-92 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Thivi_3809 1fcc15f3fdc953a38c1a968b5f233b90 256 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 254 42.688 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Thivi_3874 5629629a67322633d0a55672a630b2b8 334 SUPERFAMILY SSF48452 143 230 2.92E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3874 5629629a67322633d0a55672a630b2b8 334 SMART SM00028 183 216 2.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3874 5629629a67322633d0a55672a630b2b8 334 SMART SM00028 145 178 42.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Thivi_3874 5629629a67322633d0a55672a630b2b8 334 Gene3D G3DSA:1.25.40.10 80 331 9.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2772 fee2c9d6270443dd37d2674e83cce8d2 351 PIRSF PIRSF001361 1 350 1.3E-158 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Thivi_2772 fee2c9d6270443dd37d2674e83cce8d2 351 Pfam PF00793 DAHP synthetase I family 39 335 1.1E-97 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Thivi_2772 fee2c9d6270443dd37d2674e83cce8d2 351 SUPERFAMILY SSF51569 6 347 4.19E-135 T 13-10-2018 Thivi_2772 fee2c9d6270443dd37d2674e83cce8d2 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.8E-159 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Thivi_2772 fee2c9d6270443dd37d2674e83cce8d2 351 Gene3D G3DSA:3.20.20.70 1 349 1.1E-159 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_4214 88d7e0f10d346503dce5cbe2703db78a 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.1E-22 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4214 88d7e0f10d346503dce5cbe2703db78a 101 Gene3D G3DSA:4.10.830.10 42 101 2.3E-20 T 13-10-2018 Thivi_4214 88d7e0f10d346503dce5cbe2703db78a 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.957 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Thivi_4214 88d7e0f10d346503dce5cbe2703db78a 101 SUPERFAMILY SSF57716 2 101 1.64E-33 T 13-10-2018 Thivi_3887 d40d345fb009d995c6af54748c5604f8 524 Pfam PF14516 AAA-like domain 40 263 8.8E-8 T 13-10-2018 Thivi_3887 d40d345fb009d995c6af54748c5604f8 524 Gene3D G3DSA:3.40.50.300 23 198 1.3E-6 T 13-10-2018 Thivi_3887 d40d345fb009d995c6af54748c5604f8 524 SUPERFAMILY SSF52540 26 272 8.69E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3058 d0638215fbff2772fca86c1b4bac7ac6 52 Pfam PF04995 Heme exporter protein D (CcmD) 8 48 1.8E-13 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Thivi_3058 d0638215fbff2772fca86c1b4bac7ac6 52 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 8 48 1.6E-12 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Thivi_0845 79a561e0f4a9172e8b5a1144478ad454 110 SUPERFAMILY SSF50022 5 107 6.68E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_0845 79a561e0f4a9172e8b5a1144478ad454 110 Gene3D G3DSA:2.102.10.10 1 108 3.8E-32 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Thivi_0845 79a561e0f4a9172e8b5a1144478ad454 110 Pfam PF00355 Rieske [2Fe-2S] domain 6 90 5.2E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Thivi_0302 f5fc08b8b8673fc0da4509374de7eaf0 222 Pfam PF02224 Cytidylate kinase 5 214 2.3E-71 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Thivi_0302 f5fc08b8b8673fc0da4509374de7eaf0 222 Hamap MF_00238 Cytidylate kinase [cmk]. 3 217 32.932 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Thivi_0302 f5fc08b8b8673fc0da4509374de7eaf0 222 SUPERFAMILY SSF52540 3 216 1.49E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0302 f5fc08b8b8673fc0da4509374de7eaf0 222 TIGRFAM TIGR00017 cmk: cytidylate kinase 2 212 2.8E-71 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Thivi_0302 f5fc08b8b8673fc0da4509374de7eaf0 222 Gene3D G3DSA:3.40.50.300 1 219 1.4E-75 T 13-10-2018 Thivi_3592 6c1821cff8bff99b88621687fab7fa2e 268 SUPERFAMILY SSF51366 15 264 5.65E-86 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Thivi_3592 6c1821cff8bff99b88621687fab7fa2e 268 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 264 36.125 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Thivi_3592 6c1821cff8bff99b88621687fab7fa2e 268 Gene3D G3DSA:3.20.20.70 2 265 8.9E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3592 6c1821cff8bff99b88621687fab7fa2e 268 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Thivi_3592 6c1821cff8bff99b88621687fab7fa2e 268 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 261 3.6E-96 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Thivi_3857 687804cc0817a709c377606ec2e10163 232 Pfam PF05742 Transport and Golgi organisation 2 1 154 2.7E-17 T 13-10-2018 IPR008551 Transport and Golgi organisation protein 2 Thivi_3857 687804cc0817a709c377606ec2e10163 232 Gene3D G3DSA:3.60.60.10 14 167 1.4E-9 T 13-10-2018 Thivi_4503 b1c442a48203599f91214837363fce47 484 SMART SM00327 26 219 1.1E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_4503 b1c442a48203599f91214837363fce47 484 Gene3D G3DSA:3.40.50.410 27 216 7.9E-27 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4503 b1c442a48203599f91214837363fce47 484 SUPERFAMILY SSF53300 24 210 3.71E-23 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4503 b1c442a48203599f91214837363fce47 484 Pfam PF00092 von Willebrand factor type A domain 28 204 1.6E-10 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_3108 ec12d2912378f7bcb35bb62bd33e8b4f 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 78 1.5E-8 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thivi_3108 ec12d2912378f7bcb35bb62bd33e8b4f 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 2.5E-5 T 13-10-2018 Thivi_3108 ec12d2912378f7bcb35bb62bd33e8b4f 84 SUPERFAMILY SSF143120 11 69 3.14E-6 T 13-10-2018 IPR036165 YefM-like superfamily Thivi_4257 007edcb24b3e1b5f2332875ce6be96b9 513 Pfam PF02706 Chain length determinant protein 13 93 2.6E-7 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Thivi_4257 007edcb24b3e1b5f2332875ce6be96b9 513 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 503 1.9E-153 T 13-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant Thivi_1668 b7a1f388d7b39e539ab29a6413f4cc6d 367 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 17 344 1.0E-114 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Thivi_1668 b7a1f388d7b39e539ab29a6413f4cc6d 367 Gene3D G3DSA:1.20.1530.20 11 346 2.0E-17 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily Thivi_1668 b7a1f388d7b39e539ab29a6413f4cc6d 367 PIRSF PIRSF005508 4 360 1.0E-115 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Thivi_1668 b7a1f388d7b39e539ab29a6413f4cc6d 367 Pfam PF01758 Sodium Bile acid symporter family 63 257 7.5E-35 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Thivi_2457 9bce108cd60f886dc6dbaee298e6daae 224 Pfam PF04012 PspA/IM30 family 3 221 1.6E-47 T 13-10-2018 IPR007157 PspA/IM30 Thivi_3182 850163645825a3d1191f22b4acd6ab18 342 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 5 342 22.442 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_3182 850163645825a3d1191f22b4acd6ab18 342 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 340 7.6E-90 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Thivi_3182 850163645825a3d1191f22b4acd6ab18 342 Pfam PF03116 NQR2, RnfD, RnfE family 8 340 1.6E-100 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Thivi_1498 d77811c52289556e048b14d374e0d438 352 Pfam PF06834 TraU protein 51 349 5.4E-97 T 13-10-2018 IPR009649 TraU Thivi_2024 bcc057f87293fbbde04061608ca1ba39 351 SUPERFAMILY SSF48576 12 290 2.3E-80 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2024 bcc057f87293fbbde04061608ca1ba39 351 Gene3D G3DSA:1.10.600.10 4 290 1.2E-78 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2024 bcc057f87293fbbde04061608ca1ba39 351 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 163 188 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Thivi_2024 bcc057f87293fbbde04061608ca1ba39 351 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 133 148 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Thivi_2024 bcc057f87293fbbde04061608ca1ba39 351 Pfam PF00494 Squalene/phytoene synthase 20 274 5.0E-72 T 13-10-2018 Thivi_4378 54cc222444a358c4a8ed5cabb1017416 141 SMART SM00400 53 106 0.0026 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_4378 54cc222444a358c4a8ed5cabb1017416 141 SUPERFAMILY SSF57783 39 114 9.52E-12 T 13-10-2018 Thivi_4378 54cc222444a358c4a8ed5cabb1017416 141 Gene3D G3DSA:3.90.580.10 11 116 1.4E-12 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Thivi_4378 54cc222444a358c4a8ed5cabb1017416 141 Pfam PF01807 CHC2 zinc finger 38 113 3.2E-7 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Thivi_3686 01897203636a502b9426b01188de0898 408 Pfam PF06245 Protein of unknown function (DUF1015) 4 405 1.5E-124 T 13-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Thivi_3686 01897203636a502b9426b01188de0898 408 PIRSF PIRSF033563 1 408 3.1E-123 T 13-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Thivi_4522 ea8600b1273f02c3c9dd955fe2cd3ce8 410 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 7 224 1.3E-55 T 13-10-2018 IPR011742 CRISPR-associated protein, TM1812 Thivi_4522 ea8600b1273f02c3c9dd955fe2cd3ce8 410 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 8 373 4.2E-27 T 13-10-2018 IPR019016 CRISPR-associated DxTHG protein Thivi_1061 6f6524113aa05b2a51a0b60350327af3 130 SUPERFAMILY SSF46548 20 102 3.24E-14 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1061 6f6524113aa05b2a51a0b60350327af3 130 Gene3D G3DSA:3.30.70.3270 29 130 7.9E-18 T 13-10-2018 Thivi_1061 6f6524113aa05b2a51a0b60350327af3 130 Pfam PF13187 4Fe-4S dicluster domain 51 103 1.0E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3684 99abf2667f1ba444cebae18f426ac7d3 107 SMART SM00671 32 67 3.2E-8 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_3684 99abf2667f1ba444cebae18f426ac7d3 107 Pfam PF08238 Sel1 repeat 33 67 1.2E-7 T 13-10-2018 IPR006597 Sel1-like repeat Thivi_3684 99abf2667f1ba444cebae18f426ac7d3 107 Gene3D G3DSA:1.25.40.10 23 96 1.1E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3684 99abf2667f1ba444cebae18f426ac7d3 107 SUPERFAMILY SSF81901 25 71 5.49E-9 T 13-10-2018 Thivi_1015 c682815dd0d4ba8a4864a15852ea2f0b 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 277 1.2E-58 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_1015 c682815dd0d4ba8a4864a15852ea2f0b 319 Pfam PF03186 CobD/Cbib protein 11 297 1.8E-80 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_1015 c682815dd0d4ba8a4864a15852ea2f0b 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 319 77.086 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_2862 bbee8c925403dfcd056c579bca65a4f4 143 Pfam PF01724 Domain of unknown function DUF29 4 141 5.7E-49 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_2862 bbee8c925403dfcd056c579bca65a4f4 143 Gene3D G3DSA:1.20.1220.20 1 142 6.1E-36 T 13-10-2018 Thivi_3019 f6c1711c5fb660d73bc7a4696a191943 46 SUPERFAMILY SSF54862 12 40 1.05E-7 T 13-10-2018 Thivi_3019 f6c1711c5fb660d73bc7a4696a191943 46 Pfam PF12837 4Fe-4S binding domain 17 33 6.1E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3019 f6c1711c5fb660d73bc7a4696a191943 46 Gene3D G3DSA:3.30.70.20 2 41 8.0E-7 T 13-10-2018 Thivi_3586 f9bd1ea940b0d0de9abbadf242f2346d 83 Gene3D G3DSA:3.30.160.250 1 59 2.1E-15 T 13-10-2018 Thivi_3586 f9bd1ea940b0d0de9abbadf242f2346d 83 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 55 2.6E-7 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Thivi_3586 f9bd1ea940b0d0de9abbadf242f2346d 83 SUPERFAMILY SSF143100 1 56 1.03E-15 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_4181 d0e7c1cfb9991768dc86916d96d44693 443 Gene3D G3DSA:2.40.160.60 25 443 1.3E-90 T 13-10-2018 Thivi_4181 d0e7c1cfb9991768dc86916d96d44693 443 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 411 1.8E-33 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Thivi_4181 d0e7c1cfb9991768dc86916d96d44693 443 SUPERFAMILY SSF56935 26 443 1.05E-53 T 13-10-2018 Thivi_3607 93c4a7f0acfdddfaf9cf6524830b2bb4 104 Pfam PF13808 DDE_Tnp_1-associated 6 93 4.4E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal Thivi_3867 2bdac6cedb00281f702a48bb9d1f850a 92 Gene3D G3DSA:3.30.70.330 1 92 2.8E-30 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_3867 2bdac6cedb00281f702a48bb9d1f850a 92 SMART SM00360 2 75 5.4E-27 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Thivi_3867 2bdac6cedb00281f702a48bb9d1f850a 92 SUPERFAMILY SSF54928 2 90 1.48E-31 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Thivi_3867 2bdac6cedb00281f702a48bb9d1f850a 92 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 7.0E-23 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Thivi_4556 e009704855040b91ea653b4fa696411a 265 Pfam PF01925 Sulfite exporter TauE/SafE 10 261 1.2E-53 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Thivi_2337 6777ffec231762f99e015734c7ef8181 268 Pfam PF10881 Protein of unknown function (DUF2726) 39 159 7.4E-23 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 Thivi_2389 c84a2b00e6642f778b7a07e407fa1880 232 Pfam PF04340 Protein of unknown function, DUF484 18 222 2.0E-43 T 13-10-2018 IPR007435 Protein of unknown function DUF484 Thivi_2389 c84a2b00e6642f778b7a07e407fa1880 232 Gene3D G3DSA:3.30.450.40 50 225 4.9E-41 T 13-10-2018 IPR029016 GAF-like domain superfamily Thivi_1739 5288e4897b3e96447863f5bc54063cfb 78 Gene3D G3DSA:2.10.260.10 1 78 3.7E-16 T 13-10-2018 Thivi_1739 5288e4897b3e96447863f5bc54063cfb 78 SMART SM00966 7 49 7.8E-4 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1739 5288e4897b3e96447863f5bc54063cfb 78 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 56 8.1E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1739 5288e4897b3e96447863f5bc54063cfb 78 SUPERFAMILY SSF89447 3 69 4.34E-12 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2392 1af5f24dff8c71f3ee2674918242d82b 163 Gene3D G3DSA:3.40.920.10 2 100 9.8E-30 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_2392 1af5f24dff8c71f3ee2674918242d82b 163 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 107 1.4E-20 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Thivi_2392 1af5f24dff8c71f3ee2674918242d82b 163 SUPERFAMILY SSF53323 3 157 4.97E-30 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_2392 1af5f24dff8c71f3ee2674918242d82b 163 Gene3D G3DSA:3.40.920.10 101 160 6.5E-6 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 338 4.3E-49 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 Gene3D G3DSA:1.10.287.470 116 207 6.2E-72 T 13-10-2018 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 SUPERFAMILY SSF111369 70 320 7.19E-20 T 13-10-2018 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 317 1.7E-20 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 Gene3D G3DSA:2.40.30.170 71 324 6.2E-72 T 13-10-2018 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 Gene3D G3DSA:2.40.420.20 66 376 6.2E-72 T 13-10-2018 Thivi_0760 18836ac5dca9dd2d93cb041b4779d887 428 Gene3D G3DSA:2.40.50.100 82 245 6.2E-72 T 13-10-2018 Thivi_2654 92cdd2b402ac150518822cd2b73e6469 438 Pfam PF02371 Transposase IS116/IS110/IS902 family 303 359 5.2E-10 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Thivi_2654 92cdd2b402ac150518822cd2b73e6469 438 Pfam PF01548 Transposase 27 169 2.2E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Thivi_1300 92cdd2b402ac150518822cd2b73e6469 438 Pfam PF02371 Transposase IS116/IS110/IS902 family 303 359 5.2E-10 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Thivi_1300 92cdd2b402ac150518822cd2b73e6469 438 Pfam PF01548 Transposase 27 169 2.2E-10 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Thivi_1305 d1e3fe2505ffedd39ec76524961b4d3a 216 Gene3D G3DSA:1.20.950.20 49 174 9.9E-7 T 13-10-2018 Thivi_1305 d1e3fe2505ffedd39ec76524961b4d3a 216 Pfam PF02665 Nitrate reductase gamma subunit 62 163 2.5E-5 T 13-10-2018 IPR023234 NarG-like domain Thivi_1305 d1e3fe2505ffedd39ec76524961b4d3a 216 SUPERFAMILY SSF103501 8 200 1.03E-23 T 13-10-2018 IPR036197 NarG-like superfamily Thivi_3934 b36821e5e066ed6404a0df89eca6c0ce 209 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 161 183 8.9E-6 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3934 b36821e5e066ed6404a0df89eca6c0ce 209 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 9 32 8.9E-6 T 13-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Thivi_3934 b36821e5e066ed6404a0df89eca6c0ce 209 SUPERFAMILY SSF81342 1 203 2.04E-25 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_3934 b36821e5e066ed6404a0df89eca6c0ce 209 Pfam PF01292 Prokaryotic cytochrome b561 7 198 1.7E-23 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_3934 b36821e5e066ed6404a0df89eca6c0ce 209 Gene3D G3DSA:1.20.950.20 1 190 3.7E-18 T 13-10-2018 Thivi_0882 2ec67acd50fbad51b7b72654c265f78d 250 SUPERFAMILY SSF53335 66 215 2.36E-6 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0882 2ec67acd50fbad51b7b72654c265f78d 250 Pfam PF13578 Methyltransferase domain 92 210 2.3E-9 T 13-10-2018 Thivi_0882 2ec67acd50fbad51b7b72654c265f78d 250 Gene3D G3DSA:3.40.50.150 32 236 1.5E-26 T 13-10-2018 Thivi_2266 ede4322de45a19b3399170dfddc36886 206 Pfam PF05685 Putative restriction endonuclease 27 175 7.1E-19 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_2266 ede4322de45a19b3399170dfddc36886 206 SUPERFAMILY SSF52980 23 176 1.61E-8 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0266 5f03bbe68d329d10a8a55bc04557fd36 423 SUPERFAMILY SSF103473 3 414 8.76E-36 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_0266 5f03bbe68d329d10a8a55bc04557fd36 423 Gene3D G3DSA:1.20.1250.20 6 415 2.0E-28 T 13-10-2018 Thivi_0266 5f03bbe68d329d10a8a55bc04557fd36 423 Pfam PF11700 Vacuole effluxer Atg22 like 137 410 3.5E-49 T 13-10-2018 IPR024671 Autophagy-related protein 22-like Thivi_0266 5f03bbe68d329d10a8a55bc04557fd36 423 Pfam PF11700 Vacuole effluxer Atg22 like 56 129 1.3E-13 T 13-10-2018 IPR024671 Autophagy-related protein 22-like Thivi_2014 986f07234c98b9fbb150db8ddd7b7f61 289 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Thivi_2014 986f07234c98b9fbb150db8ddd7b7f61 289 Gene3D G3DSA:1.10.600.10 2 277 1.4E-61 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2014 986f07234c98b9fbb150db8ddd7b7f61 289 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 200 212 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site Thivi_2014 986f07234c98b9fbb150db8ddd7b7f61 289 SUPERFAMILY SSF48576 19 272 7.67E-62 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily Thivi_2014 986f07234c98b9fbb150db8ddd7b7f61 289 Pfam PF00348 Polyprenyl synthetase 26 235 4.1E-42 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Thivi_1798 34a56ee15559113b2adeb05082ce0f68 163 Gene3D G3DSA:1.20.120.1630 6 162 5.7E-24 T 13-10-2018 Thivi_1798 34a56ee15559113b2adeb05082ce0f68 163 Pfam PF04191 Phospholipid methyltransferase 81 142 6.8E-8 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Thivi_0363 86dea1d740afd4bc80ebd0cd079144cb 674 Pfam PF02120 Flagellar hook-length control protein FliK 546 626 8.6E-21 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Thivi_0363 86dea1d740afd4bc80ebd0cd079144cb 674 Gene3D G3DSA:3.30.750.140 533 641 3.6E-29 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 SUPERFAMILY SSF53756 235 726 1.06E-103 T 13-10-2018 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 240 723 1.4E-154 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 Pfam PF00534 Glycosyl transferases group 1 532 696 1.0E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 Pfam PF08323 Starch synthase catalytic domain 240 480 4.5E-61 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 Gene3D G3DSA:3.40.50.2000 494 706 2.4E-154 T 13-10-2018 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 Gene3D G3DSA:3.40.50.2000 240 721 2.4E-154 T 13-10-2018 Thivi_3276 427bf5f483dc8307068c4254c51ac9ea 727 Hamap MF_00484 Glycogen synthase [glgA]. 238 724 37.903 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 SUPERFAMILY SSF51905 8 395 6.96E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 Gene3D G3DSA:3.50.50.60 8 385 4.4E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 Gene3D G3DSA:3.90.660.20 41 351 4.4E-44 T 13-10-2018 Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 Gene3D G3DSA:1.10.3110.20 109 180 4.4E-44 T 13-10-2018 Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 Pfam PF01593 Flavin containing amine oxidoreductase 14 109 1.3E-12 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_2837 7bfab87e8c69f7ab520ba6497b89b7d8 398 Pfam PF01593 Flavin containing amine oxidoreductase 176 273 1.4E-8 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Thivi_1005 7efceb4623e00fc64e54e911a20faf63 349 Gene3D G3DSA:2.40.10.220 9 129 4.2E-10 T 13-10-2018 Thivi_1005 7efceb4623e00fc64e54e911a20faf63 349 SUPERFAMILY SSF141371 10 120 8.44E-9 T 13-10-2018 Thivi_1005 7efceb4623e00fc64e54e911a20faf63 349 Pfam PF07238 PilZ domain 11 112 1.8E-7 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_3996 31deaad514c204b877687264a05da890 159 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 7.2E-65 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 Thivi_3996 31deaad514c204b877687264a05da890 159 Gene3D G3DSA:3.50.30.40 1 159 5.5E-65 T 13-10-2018 Thivi_3996 31deaad514c204b877687264a05da890 159 SUPERFAMILY SSF89562 3 157 1.44E-48 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Thivi_3996 31deaad514c204b877687264a05da890 159 Pfam PF03737 Aldolase/RraA 6 153 1.4E-44 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Thivi_0407 4ba1099cac9a71f634958cefd8c3a1aa 114 Gene3D G3DSA:1.20.58.380 3 86 3.2E-5 T 13-10-2018 Thivi_0407 4ba1099cac9a71f634958cefd8c3a1aa 114 Pfam PF05400 Flagellar protein FliT 18 97 3.5E-9 T 13-10-2018 IPR008622 Flagellar protein FliT Thivi_4138 d532f146d4ed9c8736b12742e93e66e4 453 SUPERFAMILY SSF111283 10 452 3.66E-84 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_4138 d532f146d4ed9c8736b12742e93e66e4 453 Pfam PF01523 Putative modulator of DNA gyrase 36 330 7.6E-42 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_4138 d532f146d4ed9c8736b12742e93e66e4 453 Gene3D G3DSA:3.30.2290.10 1 241 5.5E-66 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_3838 e6d5582d475f99ae20a3241a6197e4db 183 Pfam PF12644 Protein of unknown function (DUF3782) 17 75 1.7E-5 T 13-10-2018 IPR024271 Protein of unknown function DUF3782 Thivi_3838 e6d5582d475f99ae20a3241a6197e4db 183 SUPERFAMILY SSF52980 18 183 6.17E-24 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3932 94f619dab1ed194b8b911f33157d4e34 733 SUPERFAMILY SSF48695 544 708 5.63E-9 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3932 94f619dab1ed194b8b911f33157d4e34 733 Gene3D G3DSA:1.10.1130.10 114 427 3.7E-32 T 13-10-2018 Thivi_3932 94f619dab1ed194b8b911f33157d4e34 733 SUPERFAMILY SSF48695 124 436 6.54E-30 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3932 94f619dab1ed194b8b911f33157d4e34 733 Pfam PF13435 Cytochrome c554 and c-prime 307 399 8.1E-5 T 13-10-2018 IPR023155 Cytochrome c-552/4 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 Gene3D G3DSA:3.40.50.2300 1 121 6.5E-36 T 13-10-2018 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 Pfam PF00072 Response regulator receiver domain 4 112 6.7E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 Gene3D G3DSA:1.10.10.10 122 227 1.6E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.6E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 SUPERFAMILY SSF46894 119 221 5.95E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 SMART SM00862 145 220 2.9E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 SMART SM00448 1 112 3.3E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_4335 31a72aa468e71fc55d90bda11aedd90a 232 SUPERFAMILY SSF52172 1 135 1.85E-36 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_3678 a1a69e53e93e41356415f95b5b2844dc 406 SUPERFAMILY SSF88713 115 375 4.7E-9 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Thivi_4273 ba6f06fa263c5249ef981d86c78d0f39 297 Gene3D G3DSA:3.40.50.720 6 269 8.8E-41 T 13-10-2018 Thivi_4273 ba6f06fa263c5249ef981d86c78d0f39 297 SUPERFAMILY SSF69572 9 261 3.27E-51 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Thivi_4273 ba6f06fa263c5249ef981d86c78d0f39 297 Pfam PF00899 ThiF family 12 260 1.9E-37 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Thivi_0305 13e1cc9894a80e6f8931a951746db4f5 74 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 7.5E-30 T 13-10-2018 IPR021363 Protein of unknown function DUF2835 Thivi_0257 f062b45fa678d79ef2e146ba75d50091 380 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 362 7.7E-106 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Thivi_0257 f062b45fa678d79ef2e146ba75d50091 380 PIRSF PIRSF000267 3 379 1.6E-121 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Thivi_0257 f062b45fa678d79ef2e146ba75d50091 380 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 380 8.0E-158 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Thivi_3292 2209cedccda62c959eb82db1b99da0a2 315 Pfam PF01148 Cytidylyltransferase family 48 313 4.8E-62 T 13-10-2018 Thivi_4591 fcc5adb460b1b9589982df22132f97da 119 SUPERFAMILY SSF52091 8 89 6.67E-7 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_4591 fcc5adb460b1b9589982df22132f97da 119 Gene3D G3DSA:3.30.750.24 10 88 7.1E-6 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_3850 0bed628216a8c706f4033668f9af790f 80 Pfam PF13711 Domain of unknown function (DUF4160) 9 72 8.2E-19 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_1208 e73d401350d7e64e741df1d4ba6ddf05 306 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 13 295 8.9E-39 T 13-10-2018 IPR010106 Recombination-promoting nuclease RpnA Thivi_1208 e73d401350d7e64e741df1d4ba6ddf05 306 Pfam PF12784 PD-(D/E)XK nuclease family transposase 12 239 1.8E-37 T 13-10-2018 Thivi_3976 bd69c3f84dc40f4d9a73e2c80dfe80d8 99 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 32.405 T 13-10-2018 IPR023081 Cell division protein FtsB Thivi_3976 bd69c3f84dc40f4d9a73e2c80dfe80d8 99 Pfam PF04977 Septum formation initiator 11 89 1.2E-24 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Thivi_4165 77d72399d2c5375174c2a66e45b8d92b 248 SUPERFAMILY SSF69572 2 246 4.84E-89 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Thivi_4165 77d72399d2c5375174c2a66e45b8d92b 248 Gene3D G3DSA:3.40.50.720 1 248 4.1E-92 T 13-10-2018 Thivi_4165 77d72399d2c5375174c2a66e45b8d92b 248 Pfam PF00899 ThiF family 9 241 3.5E-64 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Thivi_2577 cd2c16e591c6255a08e5101933af6a43 549 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 106 271 3.4E-13 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Thivi_1499 8e517753807ac157fc8e9540f81a4405 404 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 103 190 2.3E-9 T 13-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC Thivi_2708 d84e986b04f8452e4fe183fe49029eac 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 1.8E-22 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_2708 d84e986b04f8452e4fe183fe49029eac 269 PIRSF PIRSF003092 1 269 1.1E-90 T 13-10-2018 IPR025501 ATP binding protein MinD Thivi_2708 d84e986b04f8452e4fe183fe49029eac 269 SUPERFAMILY SSF52540 2 267 4.37E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2708 d84e986b04f8452e4fe183fe49029eac 269 Gene3D G3DSA:3.40.50.300 1 259 1.7E-72 T 13-10-2018 Thivi_2708 d84e986b04f8452e4fe183fe49029eac 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.8E-109 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Thivi_2699 d8e5f08a9635fc2c7db40e1a9b95cbe4 220 SUPERFAMILY SSF103501 10 215 1.44E-34 T 13-10-2018 IPR036197 NarG-like superfamily Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 Gene3D G3DSA:2.40.50.100 61 207 4.6E-61 T 13-10-2018 Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 Gene3D G3DSA:2.40.30.170 47 280 4.6E-61 T 13-10-2018 Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 Gene3D G3DSA:1.10.287.470 95 167 4.6E-61 T 13-10-2018 Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 268 2.4E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 Gene3D G3DSA:2.40.420.20 46 353 4.6E-61 T 13-10-2018 Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 SUPERFAMILY SSF111369 50 230 5.1E-24 T 13-10-2018 Thivi_4363 d43f4d9240ad08a48ada493cc4b75146 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 355 1.6E-57 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Thivi_3036 b6d241027fb2b533cd378c5c94db77f9 361 Gene3D G3DSA:3.40.390.10 24 212 1.2E-6 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Thivi_3036 b6d241027fb2b533cd378c5c94db77f9 361 SUPERFAMILY SSF55486 153 211 9.05E-8 T 13-10-2018 Thivi_3036 b6d241027fb2b533cd378c5c94db77f9 361 SUPERFAMILY SSF55486 194 326 7.69E-5 T 13-10-2018 Thivi_4381 f37df3a3ad87881a2600f16e96f5aa70 780 Pfam PF06048 Domain of unknown function (DUF927) 225 497 3.2E-72 T 13-10-2018 IPR009270 Domain of unknown function DUF927 Thivi_1069 adc461db0ebb80640d4ab5327bd10771 66 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.597 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 Thivi_1069 adc461db0ebb80640d4ab5327bd10771 66 Gene3D G3DSA:2.20.25.10 9 66 3.3E-23 T 13-10-2018 Thivi_1069 adc461db0ebb80640d4ab5327bd10771 66 SUPERFAMILY SSF158997 1 54 9.29E-20 T 13-10-2018 Thivi_1069 adc461db0ebb80640d4ab5327bd10771 66 Pfam PF03966 Trm112p-like protein 3 41 1.1E-8 T 13-10-2018 IPR005651 Trm112-like Thivi_4586 e191172544b85cf1dc2fa703baaca049 324 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 22 304 4.1E-21 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 233 3.7E-50 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 273 496 2.5E-85 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 494 3.2E-208 T 13-10-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 SUPERFAMILY SSF52540 302 492 2.07E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 SUPERFAMILY SSF52540 40 217 9.8E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 Gene3D G3DSA:3.40.50.300 1 236 4.6E-71 T 13-10-2018 Thivi_4587 458b7c1e17eb5c01ff23056f1708e6b3 522 Gene3D G3DSA:3.40.50.300 241 497 8.3E-102 T 13-10-2018 Thivi_4236 e48f6bee7a282124b2d519e8629d8c27 94 Pfam PF10387 Protein of unknown function (DUF2442) 5 73 2.4E-16 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_4236 e48f6bee7a282124b2d519e8629d8c27 94 Gene3D G3DSA:3.30.2020.10 1 77 1.0E-8 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_4236 e48f6bee7a282124b2d519e8629d8c27 94 SUPERFAMILY SSF143880 1 73 5.89E-18 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_2915 3510be8b61d1df761444e8e933d745dd 293 SUPERFAMILY SSF53335 47 264 8.85E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2915 3510be8b61d1df761444e8e933d745dd 293 Pfam PF13649 Methyltransferase domain 102 201 2.3E-6 T 13-10-2018 Thivi_2915 3510be8b61d1df761444e8e933d745dd 293 Gene3D G3DSA:3.40.50.150 54 270 2.4E-42 T 13-10-2018 Thivi_0662 dcdc75be39e9545deb619b7a1f7a0a9f 964 Pfam PF03993 Domain of Unknown Function (DUF349) 689 760 1.5E-14 T 13-10-2018 IPR007139 Protein of unknown function DUF349 Thivi_0662 dcdc75be39e9545deb619b7a1f7a0a9f 964 Pfam PF03993 Domain of Unknown Function (DUF349) 618 683 6.0E-7 T 13-10-2018 IPR007139 Protein of unknown function DUF349 Thivi_0662 dcdc75be39e9545deb619b7a1f7a0a9f 964 Pfam PF03993 Domain of Unknown Function (DUF349) 537 610 1.4E-11 T 13-10-2018 IPR007139 Protein of unknown function DUF349 Thivi_1721 c954f194d2d151ca33758697d6191988 182 Pfam PF04982 HPP family 57 178 1.3E-44 T 13-10-2018 IPR007065 HPP Thivi_0088 927cc7ab341fb48643919c80ffcce138 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 1.1E-20 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Thivi_0088 927cc7ab341fb48643919c80ffcce138 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 77 22.469 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Thivi_0088 927cc7ab341fb48643919c80ffcce138 83 Pfam PF02416 mttA/Hcf106 family 6 55 4.9E-14 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Thivi_1063 3b8f0555648004ff6f64b1560aded213 444 Pfam PF04403 Paraquat-inducible protein A 301 396 6.2E-10 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like Thivi_1402 ed49684daff2143e50e6367aa38616b9 263 Gene3D G3DSA:3.60.20.10 2 247 1.0E-17 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1402 ed49684daff2143e50e6367aa38616b9 263 SUPERFAMILY SSF56235 2 253 2.64E-27 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1402 ed49684daff2143e50e6367aa38616b9 263 PIRSF PIRSF009120 1 261 4.2E-83 T 13-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Thivi_2898 7875a2bfc0c8c881cf9a12cffac43977 265 Hamap MF_00443 Thiazole synthase [thiG]. 10 265 42.885 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Thivi_2898 7875a2bfc0c8c881cf9a12cffac43977 265 Gene3D G3DSA:3.20.20.70 1 264 1.3E-120 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_2898 7875a2bfc0c8c881cf9a12cffac43977 265 SUPERFAMILY SSF110399 9 250 3.01E-90 T 13-10-2018 Thivi_2898 7875a2bfc0c8c881cf9a12cffac43977 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 1.5E-110 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Thivi_2814 9005d1fa2f9115d6717f40a4913731a0 61 Gene3D G3DSA:3.30.920.30 1 60 1.7E-9 T 13-10-2018 IPR038570 HicA superfamily Thivi_2814 9005d1fa2f9115d6717f40a4913731a0 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 58 2.5E-9 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Thivi_2814 9005d1fa2f9115d6717f40a4913731a0 61 SUPERFAMILY SSF54786 1 59 9.81E-12 T 13-10-2018 Thivi_0568 866e46c11b9d7c0f42c8ab79db4293c4 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.5E-41 T 13-10-2018 IPR006214 Bax inhibitor 1-related Thivi_1375 74f826c4d641826f2d63d75e82b475ff 110 Pfam PF03334 Na+/H+ antiporter subunit 14 90 3.5E-20 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 TIGRFAM TIGR03356 BGL: beta-galactosidase 7 451 1.8E-172 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 384 395 2.1E-21 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 363 371 2.1E-21 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 405 422 2.1E-21 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 429 441 2.1E-21 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 300 314 2.1E-21 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 Pfam PF00232 Glycosyl hydrolase family 1 5 459 1.4E-154 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 Gene3D G3DSA:3.20.20.80 1 460 1.8E-178 T 13-10-2018 Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 SUPERFAMILY SSF51445 6 459 9.7E-165 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_4497 cce25a047a05200591cef7adf3e9bce0 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 363 371 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site Thivi_0270 8dd07883ed7060f44dfe8ce82d2cfc42 299 Gene3D G3DSA:3.90.550.10 1 186 6.1E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_0270 8dd07883ed7060f44dfe8ce82d2cfc42 299 Pfam PF00535 Glycosyl transferase family 2 4 117 1.8E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_0270 8dd07883ed7060f44dfe8ce82d2cfc42 299 SUPERFAMILY SSF53448 1 179 4.78E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 SMART SM00825 Beta-ketoacyl synthase 73 398 3.3E-9 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 92 236 1.8E-20 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 SUPERFAMILY SSF53901 212 397 4.48E-49 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 Gene3D G3DSA:3.40.47.10 252 394 3.8E-45 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 248 356 6.2E-30 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 Gene3D G3DSA:3.40.47.10 9 251 2.0E-32 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2254 3420dffd407f44c65cae2b6bda5f6f01 398 SUPERFAMILY SSF53901 7 240 1.7E-32 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 Thivi_2930 cd9e7308b5d1174d80f75cbd8d0a8e5b 336 SUPERFAMILY SSF53098 101 230 1.52E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_4171 adfb1ee2e3bbb434fa7c080851dfedb4 62 Gene3D G3DSA:2.10.70.10 22 62 4.0E-14 T 13-10-2018 Thivi_4171 adfb1ee2e3bbb434fa7c080851dfedb4 62 Pfam PF10636 Hemin uptake protein hemP 26 62 4.2E-18 T 13-10-2018 IPR019600 Hemin uptake protein HemP Thivi_4074 8562e83577cd939edf69274444a949b9 170 Pfam PF10504 Protein of unknown function (DUF2452) 10 154 1.2E-53 T 13-10-2018 IPR019534 Protein of unknown function DUF2452 Thivi_2026 5607cd57650e2dc3ee5c893640273ee5 324 Gene3D G3DSA:1.10.4080.10 8 320 5.3E-103 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2026 5607cd57650e2dc3ee5c893640273ee5 324 SUPERFAMILY SSF101478 11 315 1.44E-75 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Thivi_2026 5607cd57650e2dc3ee5c893640273ee5 324 Pfam PF03747 ADP-ribosylglycohydrolase 18 292 1.9E-69 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Thivi_1976 a9d275f53423a51c7cfa3ecada9e9d5b 473 SUPERFAMILY SSF55931 40 448 1.08E-42 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Thivi_1976 a9d275f53423a51c7cfa3ecada9e9d5b 473 Gene3D G3DSA:3.30.590.20 38 456 1.1E-57 T 13-10-2018 Thivi_1976 a9d275f53423a51c7cfa3ecada9e9d5b 473 PIRSF PIRSF012666 1 473 2.3E-149 T 13-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 190 1.9E-50 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 76 93 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PIRSF PIRSF001467 11 192 9.6E-80 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 3.0E-41 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 3.0E-41 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 3.0E-41 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 3.0E-41 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 3.0E-41 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 Gene3D G3DSA:2.40.100.10 17 192 1.4E-85 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Thivi_2722 549fa49ea6d3492209d71d76b2f7935a 192 SUPERFAMILY SSF50891 15 192 4.82E-78 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily Thivi_3604 2b1df537c2d1f29940bbc474dbd33dd5 168 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.1E-25 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 Thivi_3604 2b1df537c2d1f29940bbc474dbd33dd5 168 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 9.4E-25 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 Thivi_1657 8c471789a9e806b0fc52049cae3e7a5c 96 Pfam PF10387 Protein of unknown function (DUF2442) 3 71 3.4E-11 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_1657 8c471789a9e806b0fc52049cae3e7a5c 96 SUPERFAMILY SSF143880 2 73 1.03E-12 T 13-10-2018 IPR036782 NE0471-like, N-terminal Thivi_4269 0c8428e4fd076b9e69d9da533f9df118 272 Pfam PF17131 Outer membrane lipoprotein-sorting protein 79 262 8.4E-55 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Thivi_4269 0c8428e4fd076b9e69d9da533f9df118 272 Gene3D G3DSA:2.50.20.10 28 262 2.4E-63 T 13-10-2018 Thivi_2287 577d4c0f7a4541ff9c37a62a2e0a308d 271 SUPERFAMILY SSF144059 3 262 5.1E-91 T 13-10-2018 Thivi_2287 577d4c0f7a4541ff9c37a62a2e0a308d 271 Pfam PF07024 ImpE protein 138 258 1.7E-47 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type Thivi_2287 577d4c0f7a4541ff9c37a62a2e0a308d 271 PIRSF PIRSF029288 1 265 1.4E-92 T 13-10-2018 IPR009211 Predicted virulence protein, SciE type Thivi_2287 577d4c0f7a4541ff9c37a62a2e0a308d 271 Gene3D G3DSA:1.25.40.10 1 86 9.8E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 Pfam PF00361 Proton-conducting membrane transporter 185 457 1.0E-50 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 271 292 5.7E-26 T 13-10-2018 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 126 151 5.7E-26 T 13-10-2018 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 293 319 5.7E-26 T 13-10-2018 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 360 372 5.7E-26 T 13-10-2018 Thivi_0494 2dcb1b36e901cc00f83d45e087f3ee98 644 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 122 172 4.9E-8 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0347 eede228e0e334d0d48455c7aa87e2809 403 Gene3D G3DSA:1.10.3210.10 127 382 1.1E-47 T 13-10-2018 Thivi_0347 eede228e0e334d0d48455c7aa87e2809 403 SUPERFAMILY SSF109604 133 355 2.01E-39 T 13-10-2018 Thivi_0347 eede228e0e334d0d48455c7aa87e2809 403 SUPERFAMILY SSF51206 11 120 3.58E-5 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like Thivi_0347 eede228e0e334d0d48455c7aa87e2809 403 Pfam PF08668 HDOD domain 147 325 1.1E-31 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD Thivi_3073 7cda3fb6f46febe4a2b91ac25bdb8a26 365 Gene3D G3DSA:3.20.20.70 74 292 5.1E-31 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Thivi_3073 7cda3fb6f46febe4a2b91ac25bdb8a26 365 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 12 360 6.9E-200 T 13-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Thivi_3073 7cda3fb6f46febe4a2b91ac25bdb8a26 365 Pfam PF04055 Radical SAM superfamily 87 237 3.9E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Thivi_3073 7cda3fb6f46febe4a2b91ac25bdb8a26 365 PIRSF PIRSF004869 2 320 4.6E-94 T 13-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Thivi_3073 7cda3fb6f46febe4a2b91ac25bdb8a26 365 SUPERFAMILY SSF102114 53 322 4.12E-40 T 13-10-2018 Thivi_1393 1f5d4c46659c2a286e48a451e4cde59c 375 SUPERFAMILY SSF103515 242 373 2.35E-7 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily Thivi_1518 c56b8d7d51d0cd1bc573cafb57b6a7d6 214 Pfam PF14348 Domain of unknown function (DUF4400) 65 200 3.3E-15 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type Thivi_0337 c3926a8014421c18bdab29a60cc2f6ff 122 Pfam PF00072 Response regulator receiver domain 4 117 4.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0337 c3926a8014421c18bdab29a60cc2f6ff 122 SMART SM00448 2 117 1.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_0337 c3926a8014421c18bdab29a60cc2f6ff 122 Gene3D G3DSA:3.40.50.2300 1 122 2.5E-33 T 13-10-2018 Thivi_0337 c3926a8014421c18bdab29a60cc2f6ff 122 SUPERFAMILY SSF52172 1 122 1.07E-33 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 SUPERFAMILY SSF55486 192 453 2.27E-10 T 13-10-2018 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 SMART SM00228 501 571 3.4E-4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 Pfam PF05299 M61 glycyl aminopeptidase 280 396 8.6E-44 T 13-10-2018 IPR007963 Peptidase M61, catalytic domain Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 SUPERFAMILY SSF50156 510 581 1.31E-9 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 Gene3D G3DSA:2.60.40.3650 10 185 9.7E-59 T 13-10-2018 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 PIRSF PIRSF016493 6 609 6.6E-207 T 13-10-2018 IPR024191 Peptidase M61 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 Gene3D G3DSA:2.30.42.10 502 610 8.2E-14 T 13-10-2018 Thivi_0683 76917a33b1e560c9dcceb97936fd3ab9 612 Gene3D G3DSA:1.10.390.60 188 461 2.2E-103 T 13-10-2018 Thivi_1881 7979e8527b5e11fde73f6db66b2da0e8 438 Pfam PF01136 Peptidase family U32 86 334 3.2E-95 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Thivi_1881 7979e8527b5e11fde73f6db66b2da0e8 438 Gene3D G3DSA:2.40.30.10 346 427 9.7E-8 T 13-10-2018 Thivi_1881 7979e8527b5e11fde73f6db66b2da0e8 438 ProSitePatterns PS01276 Peptidase family U32 signature. 172 190 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Thivi_1881 7979e8527b5e11fde73f6db66b2da0e8 438 Pfam PF16325 Peptidase family U32 C-terminal domain 351 420 1.2E-17 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal Thivi_3708 3a7ec787f6607b069f13ee94fbe00449 202 Pfam PF09335 SNARE associated Golgi protein 34 160 4.5E-18 T 13-10-2018 IPR032816 SNARE associated Golgi protein Thivi_0367 713b3f586942a5afbaceef7b858ef10f 147 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 50 117 3.9E-19 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Thivi_0367 713b3f586942a5afbaceef7b858ef10f 147 Pfam PF04347 Flagellar biosynthesis protein, FliO 62 140 4.3E-17 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Thivi_2128 6e5ae18ac7966149a5538256587913fe 92 SUPERFAMILY SSF54862 6 62 5.8E-14 T 13-10-2018 Thivi_2128 6e5ae18ac7966149a5538256587913fe 92 Gene3D G3DSA:3.30.70.20 2 68 1.4E-20 T 13-10-2018 Thivi_2128 6e5ae18ac7966149a5538256587913fe 92 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3542 ed1dfc0eadbb127a760c34cf6e495b2c 1940 Gene3D G3DSA:1.10.530.10 618 759 1.6E-33 T 13-10-2018 Thivi_3542 ed1dfc0eadbb127a760c34cf6e495b2c 1940 Pfam PF01464 Transglycosylase SLT domain 623 724 9.2E-24 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_3542 ed1dfc0eadbb127a760c34cf6e495b2c 1940 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 836 902 2.0E-6 T 13-10-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal Thivi_3542 ed1dfc0eadbb127a760c34cf6e495b2c 1940 SUPERFAMILY SSF53955 619 748 4.69E-33 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_2240 51419885810a037ca452cfd52c0a62af 145 Gene3D G3DSA:3.40.50.510 2 130 2.7E-31 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Thivi_2240 51419885810a037ca452cfd52c0a62af 145 SUPERFAMILY SSF53062 1 128 5.62E-30 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Thivi_2240 51419885810a037ca452cfd52c0a62af 145 Pfam PF03610 PTS system fructose IIA component 4 106 4.0E-18 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Thivi_0772 970854e1a7c77d7b8791e270ddfeba5a 133 Gene3D G3DSA:1.20.120.340 2 128 3.4E-40 T 13-10-2018 Thivi_0772 970854e1a7c77d7b8791e270ddfeba5a 133 PIRSF PIRSF039090 2 133 3.7E-44 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Thivi_0772 970854e1a7c77d7b8791e270ddfeba5a 133 Pfam PF02561 Flagellar protein FliS 9 125 5.6E-37 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Thivi_0772 970854e1a7c77d7b8791e270ddfeba5a 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 13 124 3.1E-28 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Thivi_0772 970854e1a7c77d7b8791e270ddfeba5a 133 SUPERFAMILY SSF101116 9 129 4.58E-37 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 Gene3D G3DSA:3.40.50.2300 1 162 4.0E-55 T 13-10-2018 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 SMART SM00226 8 157 4.4E-46 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 87 102 4.0E-22 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 110 123 4.0E-22 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 53 69 4.0E-22 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 10 27 4.0E-22 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 129 144 4.0E-22 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 10 155 3.1E-38 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Thivi_2195 2c2f0d4302bbe7675d45bae141d654c4 163 SUPERFAMILY SSF52788 7 158 4.58E-50 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Thivi_3743 10414ecea3080c60e59e8a61dfa9dd01 251 Gene3D G3DSA:3.40.1390.30 99 222 2.4E-73 T 13-10-2018 Thivi_3743 10414ecea3080c60e59e8a61dfa9dd01 251 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 9 250 2.2E-52 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Thivi_3743 10414ecea3080c60e59e8a61dfa9dd01 251 SUPERFAMILY SSF102705 7 250 9.81E-73 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Thivi_3743 10414ecea3080c60e59e8a61dfa9dd01 251 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 239 4.1E-52 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Thivi_3743 10414ecea3080c60e59e8a61dfa9dd01 251 Gene3D G3DSA:3.40.1390.30 8 238 2.4E-73 T 13-10-2018 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 584 606 4.4E-13 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 314 326 4.4E-13 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 607 621 4.4E-13 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 376 395 4.4E-13 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 317 323 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 SUPERFAMILY SSF53335 286 651 6.11E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_1104 2ebd5e167b1c65b73c1d6a1d99d17823 1071 Pfam PF01555 DNA methylase 314 642 3.9E-26 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Thivi_1741 e7265ccbc35639ca47c818b512435cbe 409 SUPERFAMILY SSF48317 10 235 1.44E-23 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Thivi_1741 e7265ccbc35639ca47c818b512435cbe 409 Gene3D G3DSA:1.20.144.10 133 248 1.2E-17 T 13-10-2018 Thivi_1741 e7265ccbc35639ca47c818b512435cbe 409 Gene3D G3DSA:1.20.144.10 11 132 4.2E-11 T 13-10-2018 Thivi_1741 e7265ccbc35639ca47c818b512435cbe 409 Pfam PF01569 PAP2 superfamily 99 226 5.6E-21 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_1741 e7265ccbc35639ca47c818b512435cbe 409 SMART SM00014 97 222 1.3E-8 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_2545 2a8f8d24b2b47be5f380e64e02cffe58 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.7E-41 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2545 2a8f8d24b2b47be5f380e64e02cffe58 104 SUPERFAMILY SSF141091 1 102 6.93E-39 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2545 2a8f8d24b2b47be5f380e64e02cffe58 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 6.0E-43 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_2545 2a8f8d24b2b47be5f380e64e02cffe58 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2545 2a8f8d24b2b47be5f380e64e02cffe58 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.329 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0091 fb592ff044f2d4552eace050e8cf45da 231 Gene3D G3DSA:1.20.950.20 2 169 1.9E-15 T 13-10-2018 Thivi_0091 fb592ff044f2d4552eace050e8cf45da 231 SUPERFAMILY SSF81342 5 184 1.18E-31 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_0091 fb592ff044f2d4552eace050e8cf45da 231 Pfam PF01292 Prokaryotic cytochrome b561 9 178 1.7E-19 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_3269 a7b08563df8ee526cbae5d750d6f7c6e 139 Pfam PF02036 SCP-2 sterol transfer family 11 109 8.0E-5 T 13-10-2018 IPR003033 SCP2 sterol-binding domain Thivi_3269 a7b08563df8ee526cbae5d750d6f7c6e 139 SUPERFAMILY SSF55718 1 136 1.04E-22 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_3269 a7b08563df8ee526cbae5d750d6f7c6e 139 Gene3D G3DSA:3.30.1050.10 2 130 1.3E-11 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Thivi_0553 8e4af705908be2896e41e6ca082e934d 157 SUPERFAMILY SSF48695 35 122 2.95E-11 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3734 3709a4d70fe5071cec5a60d493a3e4c1 199 Pfam PF14338 Mrr N-terminal domain 106 191 2.8E-15 T 13-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain Thivi_4423 0b20f0a16e208f57a1ce4df7b13d5943 450 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 65 186 1.5E-20 T 13-10-2018 IPR006528 Phage head morphogenesis domain Thivi_4423 0b20f0a16e208f57a1ce4df7b13d5943 450 Pfam PF04233 Phage Mu protein F like protein 55 186 2.9E-30 T 13-10-2018 IPR006528 Phage head morphogenesis domain Thivi_2813 471b62492cf57ab34b9b229523f6948b 70 Gene3D G3DSA:3.30.160.250 4 68 1.2E-5 T 13-10-2018 Thivi_2813 471b62492cf57ab34b9b229523f6948b 70 SUPERFAMILY SSF143100 6 60 5.75E-11 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_0881 778c6931eae4d6ff32d63d1a0bcd278b 256 SUPERFAMILY SSF53335 32 255 1.8E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_0881 778c6931eae4d6ff32d63d1a0bcd278b 256 Gene3D G3DSA:3.40.50.150 50 246 1.6E-33 T 13-10-2018 Thivi_0881 778c6931eae4d6ff32d63d1a0bcd278b 256 Pfam PF04989 Cephalosporin hydroxylase 36 255 3.5E-94 T 13-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 258 2.2E-95 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 Gene3D G3DSA:3.60.21.10 1 270 9.6E-77 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 Pfam PF00149 Calcineurin-like phosphoesterase 1 154 7.8E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 270 47.135 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 PIRSF PIRSF000903 1 272 2.2E-111 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Thivi_0467 120cca5582cad6246eb51ab6aa0cbb30 278 SUPERFAMILY SSF56300 1 270 5.07E-55 T 13-10-2018 Thivi_1160 711c6b624145a91beaf7cbd0f92f8044 124 Gene3D G3DSA:3.30.420.270 54 117 2.7E-5 T 13-10-2018 Thivi_1160 711c6b624145a91beaf7cbd0f92f8044 124 Pfam PF02472 Biopolymer transport protein ExbD/TolR 4 123 1.6E-22 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Thivi_1328 a459a944e2aa0b3943fa9dfe331e3d3c 297 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 18 294 45.334 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Thivi_1328 a459a944e2aa0b3943fa9dfe331e3d3c 297 Pfam PF02666 Phosphatidylserine decarboxylase 71 291 4.3E-59 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Thivi_1328 a459a944e2aa0b3943fa9dfe331e3d3c 297 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 57 293 1.4E-70 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 2.0E-27 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 SUPERFAMILY SSF50249 10 87 4.11E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.7E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.7E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.7E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 80 3.3E-35 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 10 85 23.866 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 Gene3D G3DSA:2.40.50.140 6 88 1.2E-35 T 13-10-2018 Thivi_4210 8496419bc58acc369dfcc9e06f9718fb 88 Pfam PF00366 Ribosomal protein S17 15 81 7.8E-33 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 17 188 42.206 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 PIRSF PIRSF039093 11 191 4.5E-90 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 Pfam PF00227 Proteasome subunit 16 186 4.7E-20 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 Gene3D G3DSA:3.60.20.10 13 189 1.4E-66 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 SUPERFAMILY SSF56235 15 188 1.95E-58 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Thivi_1736 639837252037a5b3c81365c6913e0fc9 195 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 18 188 1.3E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Thivi_3227 f084e18b9acc26a6df159fd6e881a308 195 SUPERFAMILY SSF52980 17 193 1.43E-27 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_3227 f084e18b9acc26a6df159fd6e881a308 195 Pfam PF12644 Protein of unknown function (DUF3782) 26 88 1.3E-5 T 13-10-2018 IPR024271 Protein of unknown function DUF3782 Thivi_0156 cad190a23e25ba5517e08830922697dd 405 Pfam PF03239 Iron permease FTR1 family 63 253 2.8E-17 T 13-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 3.3E-78 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 SUPERFAMILY SSF56770 9 153 6.41E-68 T 13-10-2018 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 146 1.3E-22 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.657 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 Gene3D G3DSA:3.40.50.12280 2 158 1.2E-80 T 13-10-2018 Thivi_3913 8caf9cff9dd8f1153a2f377d0f1187b2 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3201 4cae91ffbd55a8981d45b0379b0d1f63 158 Pfam PF04361 Protein of unknown function (DUF494) 5 158 1.6E-52 T 13-10-2018 IPR007456 Smg Thivi_3201 4cae91ffbd55a8981d45b0379b0d1f63 158 Hamap MF_00598 Protein Smg [smg]. 5 158 27.328 T 13-10-2018 IPR007456 Smg Thivi_0610 47c082e8024818278f236a2e24543a1e 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 4.7E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 22 42 4.7E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 Pfam PF01926 50S ribosome-binding GTPase 22 136 2.2E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 20 290 9.0E-85 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 Hamap MF_00367 GTPase Era [era]. 17 307 34.041 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 178 1.8E-28 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 SUPERFAMILY SSF52540 22 215 6.92E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0610 47c082e8024818278f236a2e24543a1e 311 Gene3D G3DSA:3.40.50.300 17 195 2.2E-46 T 13-10-2018 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 Gene3D G3DSA:3.30.300.20 197 309 3.1E-38 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta Thivi_0610 47c082e8024818278f236a2e24543a1e 311 Pfam PF07650 KH domain 220 295 8.7E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Thivi_0610 47c082e8024818278f236a2e24543a1e 311 SUPERFAMILY SSF54814 193 308 5.23E-38 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Thivi_2885 1530f14398bc7244f506c9386bf3c315 242 Gene3D G3DSA:3.30.2010.10 140 234 1.2E-13 T 13-10-2018 Thivi_2885 1530f14398bc7244f506c9386bf3c315 242 Pfam PF01863 Protein of unknown function DUF45 28 232 6.7E-58 T 13-10-2018 IPR002725 Protein of unknown function DUF45 Thivi_1819 014815624a787ede0a0240e1c1b2602d 387 Pfam PF12698 ABC-2 family transporter protein 28 379 3.1E-45 T 13-10-2018 Thivi_0445 b3b01381b97cfd63dbc16c72e5637921 82 Pfam PF10636 Hemin uptake protein hemP 33 64 8.4E-9 T 13-10-2018 IPR019600 Hemin uptake protein HemP Thivi_0445 b3b01381b97cfd63dbc16c72e5637921 82 Gene3D G3DSA:2.10.70.10 32 67 2.3E-8 T 13-10-2018 Thivi_4457 5277aebf00169df369f3d0c8d5a8db87 316 SUPERFAMILY SSF47240 89 211 3.24E-5 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_4457 5277aebf00169df369f3d0c8d5a8db87 316 Pfam PF09968 Uncharacterized protein domain (DUF2202) 83 242 9.7E-53 T 13-10-2018 IPR019243 Domain of unknown function DUF2202 Thivi_4457 5277aebf00169df369f3d0c8d5a8db87 316 Gene3D G3DSA:1.20.1260.10 78 251 2.6E-59 T 13-10-2018 IPR012347 Ferritin-like Thivi_1952 826f9c8cc21362537afe9833df80d2b6 179 Pfam PF01797 Transposase IS200 like 34 130 4.0E-8 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1952 826f9c8cc21362537afe9833df80d2b6 179 SUPERFAMILY SSF143422 1 137 5.36E-32 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_1952 826f9c8cc21362537afe9833df80d2b6 179 SMART SM01321 9 132 1.5E-31 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Thivi_1952 826f9c8cc21362537afe9833df80d2b6 179 Gene3D G3DSA:3.30.70.1290 1 172 4.4E-45 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Thivi_0259 a6c745a3312592248d25654683578896 131 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 12 100 1.5E-5 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thivi_0259 a6c745a3312592248d25654683578896 131 Gene3D G3DSA:3.30.420.130 1 120 8.5E-14 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_0259 a6c745a3312592248d25654683578896 131 SUPERFAMILY SSF53146 1 118 4.84E-17 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Thivi_0604 cf1137c75974774c54d044611d91429d 143 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 129 5.9E-31 T 13-10-2018 Thivi_0604 cf1137c75974774c54d044611d91429d 143 PIRSF PIRSF004923 1 142 5.7E-32 T 13-10-2018 IPR026268 Protein RseC Thivi_2406 3f9e91cab99bcdc41cba4bd4e42e91e5 233 SUPERFAMILY SSF53335 5 164 5.12E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2406 3f9e91cab99bcdc41cba4bd4e42e91e5 233 Gene3D G3DSA:3.40.50.150 3 233 3.6E-54 T 13-10-2018 Thivi_2406 3f9e91cab99bcdc41cba4bd4e42e91e5 233 Pfam PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus 132 232 2.7E-33 T 13-10-2018 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2406 3f9e91cab99bcdc41cba4bd4e42e91e5 233 TIGRFAM TIGR02021 BchM-ChlM: magnesium protoporphyrin O-methyltransferase 10 230 1.9E-74 T 13-10-2018 IPR010251 Magnesium-protoporphyrin IX methyltransferase GO:0015995|GO:0046406 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Thivi_2406 3f9e91cab99bcdc41cba4bd4e42e91e5 233 Pfam PF05175 Methyltransferase small domain 50 131 2.2E-7 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Thivi_1888 8a369d4804e222f79700d9836d3a3a3c 311 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 279 301 0.0023 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_3520 49484363ecfbea73145b9b1bef7c351a 570 Pfam PF06074 Protein of unknown function (DUF935) 417 566 1.3E-13 T 13-10-2018 IPR009279 Protein of unknown function DUF935 Thivi_3520 49484363ecfbea73145b9b1bef7c351a 570 Pfam PF06074 Protein of unknown function (DUF935) 70 390 5.2E-54 T 13-10-2018 IPR009279 Protein of unknown function DUF935 Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 Gene3D G3DSA:3.30.428.10 1 114 1.2E-38 T 13-10-2018 IPR036265 HIT-like superfamily Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 13-10-2018 IPR019808 Histidine triad, conserved site Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 Pfam PF01230 HIT domain 12 108 3.9E-29 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 SUPERFAMILY SSF54197 1 113 1.11E-37 T 13-10-2018 IPR036265 HIT-like superfamily Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 PRINTS PR00332 Histidine triad family signature 94 104 1.9E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 PRINTS PR00332 Histidine triad family signature 26 44 1.9E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Thivi_2710 a95f9762958df637d7f4aee6f540d032 114 PRINTS PR00332 Histidine triad family signature 5 21 1.9E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein Thivi_3849 15f7d24421faf8d21b52f23ff9276645 88 Pfam PF10387 Protein of unknown function (DUF2442) 13 78 1.2E-5 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_4508 09b2ef5f10ec411950a763704e9d2d50 150 Pfam PF08308 PEGA domain 8 58 5.7E-6 T 13-10-2018 IPR013229 PEGA Thivi_4508 09b2ef5f10ec411950a763704e9d2d50 150 Pfam PF09851 Short C-terminal domain 121 147 2.4E-6 T 13-10-2018 IPR018649 SHOCT domain Thivi_1097 b719557336f63c2cc008aa8beb3dba8c 193 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Thivi_1097 b719557336f63c2cc008aa8beb3dba8c 193 SUPERFAMILY SSF52833 47 181 1.45E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_1097 b719557336f63c2cc008aa8beb3dba8c 193 Gene3D G3DSA:3.40.30.10 38 190 1.2E-36 T 13-10-2018 Thivi_1097 b719557336f63c2cc008aa8beb3dba8c 193 Pfam PF08534 Redoxin 47 163 3.6E-20 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Thivi_1896 8f80f213556346617b2fc150afdd248e 378 SUPERFAMILY SSF53474 76 324 1.9E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1896 8f80f213556346617b2fc150afdd248e 378 Gene3D G3DSA:3.40.50.1820 78 324 4.0E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_1145 f492111aad27725239f3b0e6979e2dd7 286 SUPERFAMILY SSF56300 1 226 9.12E-40 T 13-10-2018 Thivi_1145 f492111aad27725239f3b0e6979e2dd7 286 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 200 3.8E-19 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Thivi_1145 f492111aad27725239f3b0e6979e2dd7 286 Gene3D G3DSA:3.60.21.10 1 231 1.1E-45 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_1897 b8b4ff1f75bee64cbb547035d8a93dc4 121 Gene3D G3DSA:3.90.20.10 37 101 3.1E-10 T 13-10-2018 Thivi_1016 ddc44e2ec2f82de4261044c34140ed4b 249 Gene3D G3DSA:3.40.50.300 1 239 4.5E-8 T 13-10-2018 Thivi_1016 ddc44e2ec2f82de4261044c34140ed4b 249 SUPERFAMILY SSF52540 2 165 1.18E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0495 175e900eddf8e19f14ffa7aaf750abf6 286 Pfam PF00146 NADH dehydrogenase 12 281 1.4E-39 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3274 75dd6cfe08c0264c902564cfd6a789a3 194 Pfam PF03734 L,D-transpeptidase catalytic domain 80 192 3.2E-19 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Thivi_3274 75dd6cfe08c0264c902564cfd6a789a3 194 Gene3D G3DSA:2.40.440.10 79 194 1.6E-28 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_3274 75dd6cfe08c0264c902564cfd6a789a3 194 SUPERFAMILY SSF141523 79 192 3.79E-25 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Thivi_1281 2272c96b406abad4a368994292526d53 99 SUPERFAMILY SSF54909 2 98 2.15E-28 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel Thivi_1281 2272c96b406abad4a368994292526d53 99 Pfam PF03795 YCII-related domain 2 95 6.2E-26 T 13-10-2018 IPR005545 YCII-related Thivi_1281 2272c96b406abad4a368994292526d53 99 Gene3D G3DSA:3.30.70.1060 1 98 2.8E-33 T 13-10-2018 Thivi_1497 691d328015b5ed79292f973a7fcaabf2 797 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 332 478 5.9E-20 T 13-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Thivi_1497 691d328015b5ed79292f973a7fcaabf2 797 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 635 709 2.4E-23 T 13-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN Thivi_0548 a7aa50fbbbccd2cd7fcc8d84e5286917 102 Pfam PF04077 DsrH like protein 9 97 3.3E-29 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Thivi_0548 a7aa50fbbbccd2cd7fcc8d84e5286917 102 Gene3D G3DSA:3.40.1260.10 1 102 2.4E-36 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0548 a7aa50fbbbccd2cd7fcc8d84e5286917 102 SUPERFAMILY SSF75169 3 101 9.42E-30 T 13-10-2018 IPR027396 DsrEFH-like Thivi_0548 a7aa50fbbbccd2cd7fcc8d84e5286917 102 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 4 101 5.9E-31 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Thivi_0982 0c408f7c2f49b3b839dc561ed0fee0e4 189 Pfam PF05685 Putative restriction endonuclease 12 164 2.9E-31 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_0982 0c408f7c2f49b3b839dc561ed0fee0e4 189 SUPERFAMILY SSF52980 3 158 1.77E-25 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_0982 0c408f7c2f49b3b839dc561ed0fee0e4 189 Gene3D G3DSA:3.90.1570.10 4 184 1.2E-19 T 13-10-2018 Thivi_1698 f0e29fcf0205fe9464c5910206147ce8 143 Gene3D G3DSA:3.30.420.180 3 135 8.6E-32 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Thivi_1698 f0e29fcf0205fe9464c5910206147ce8 143 Pfam PF01890 Cobalamin synthesis G C-terminus 12 132 1.9E-31 T 13-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Thivi_1698 f0e29fcf0205fe9464c5910206147ce8 143 SUPERFAMILY SSF159664 11 134 1.2E-32 T 13-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 SUPERFAMILY SSF52540 46 239 2.66E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 SMART SM00382 62 233 6.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 Gene3D G3DSA:3.40.50.300 43 291 1.4E-42 T 13-10-2018 Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 Pfam PF14524 Wzt C-terminal domain 266 381 3.3E-8 T 13-10-2018 IPR029439 Wzt, C-terminal Thivi_0125 09c2543ec55eb01329e4e5e8c78874da 407 Pfam PF00005 ABC transporter 53 184 1.7E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_4052 9bb90791249ca415b81d1602ab1df8d0 306 Pfam PF00535 Glycosyl transferase family 2 9 178 1.5E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Thivi_4052 9bb90791249ca415b81d1602ab1df8d0 306 Gene3D G3DSA:3.90.550.10 1 230 4.0E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_4052 9bb90791249ca415b81d1602ab1df8d0 306 SUPERFAMILY SSF53448 2 250 7.69E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_1975 0ac20f470c64d43bf87c3727e1ae3a66 77 Gene3D G3DSA:3.30.70.100 6 71 4.8E-7 T 13-10-2018 Thivi_1975 0ac20f470c64d43bf87c3727e1ae3a66 77 SUPERFAMILY SSF55008 7 75 1.82E-6 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Thivi_0121 5fd62f03ef68e12b946725894fa1dfc3 293 Pfam PF01061 ABC-2 type transporter 46 248 3.7E-9 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Thivi_0067 51f4cec90500cc11b617414c536e645e 100 Gene3D G3DSA:3.10.20.280 1 84 6.3E-30 T 13-10-2018 IPR037021 RnfH superfamily Thivi_0067 51f4cec90500cc11b617414c536e645e 100 Hamap MF_00460 Protein RnfH [rnfH]. 1 92 23.907 T 13-10-2018 IPR005346 RnfH protein Thivi_0067 51f4cec90500cc11b617414c536e645e 100 SUPERFAMILY SSF54285 1 75 6.76E-26 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thivi_0067 51f4cec90500cc11b617414c536e645e 100 Pfam PF03658 RnfH family Ubiquitin 1 81 2.3E-34 T 13-10-2018 IPR005346 RnfH protein Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 Gene3D G3DSA:3.40.1090.10 16 127 4.7E-28 T 13-10-2018 Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 Gene3D G3DSA:3.40.1090.10 128 277 1.4E-21 T 13-10-2018 Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 Pfam PF01103 Surface antigen 546 651 5.5E-6 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 SUPERFAMILY SSF52151 29 252 9.42E-53 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 Gene3D G3DSA:2.40.160.50 504 656 2.4E-6 T 13-10-2018 Thivi_3902 1d01f19df345475749dbc323e4ebdc97 743 Pfam PF01734 Patatin-like phospholipase 34 225 2.2E-28 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Thivi_2916 b6b6b3e9a22befecab323cb63a461c51 68 SUPERFAMILY SSF47598 3 45 5.04E-6 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_3596 8f94eba64f5486ec2352e051c8a1ae66 219 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 18 219 30.504 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Thivi_3596 8f94eba64f5486ec2352e051c8a1ae66 219 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 219 7.3E-44 T 13-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 Thivi_3596 8f94eba64f5486ec2352e051c8a1ae66 219 SUPERFAMILY SSF47240 53 133 6.68E-16 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_2754 be34549dd6b8075ce891f14caac4d409 159 SUPERFAMILY SSF111384 12 153 4.97E-28 T 13-10-2018 Thivi_2754 be34549dd6b8075ce891f14caac4d409 159 Gene3D G3DSA:3.30.910.20 12 153 3.7E-34 T 13-10-2018 IPR024930 Skp domain superfamily Thivi_2754 be34549dd6b8075ce891f14caac4d409 159 Pfam PF03938 Outer membrane protein (OmpH-like) 6 152 2.9E-28 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Thivi_2754 be34549dd6b8075ce891f14caac4d409 159 SMART SM00935 1 153 1.9E-37 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Thivi_0309 1aed81afef7608b77ffa51e4590ef4b4 109 SUPERFAMILY SSF52091 10 97 3.14E-17 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0309 1aed81afef7608b77ffa51e4590ef4b4 109 Gene3D G3DSA:3.30.750.24 5 107 1.8E-19 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0309 1aed81afef7608b77ffa51e4590ef4b4 109 Pfam PF13466 STAS domain 14 92 9.3E-16 T 13-10-2018 IPR002645 STAS domain Thivi_2036 fad0af6f6f126e0503f1e5e9e4c77a05 137 Gene3D G3DSA:2.60.200.20 2 87 2.0E-18 T 13-10-2018 Thivi_2036 fad0af6f6f126e0503f1e5e9e4c77a05 137 Pfam PF00498 FHA domain 9 65 4.6E-12 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2036 fad0af6f6f126e0503f1e5e9e4c77a05 137 SMART SM00240 7 58 2.3E-7 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Thivi_2036 fad0af6f6f126e0503f1e5e9e4c77a05 137 SUPERFAMILY SSF49879 6 87 9.37E-16 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Thivi_2172 8a4326b13543b08fb366f32c6fc77802 252 SUPERFAMILY SSF56784 3 235 2.16E-13 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_2172 8a4326b13543b08fb366f32c6fc77802 252 PIRSF PIRSF030802 1 251 1.4E-60 T 13-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 Thivi_2530 ad7b00a3f8036542a18fe15cde538740 87 Pfam PF04193 PQ loop repeat 6 61 1.4E-13 T 13-10-2018 IPR006603 PQ-loop repeat Thivi_2530 ad7b00a3f8036542a18fe15cde538740 87 Gene3D G3DSA:1.20.1280.290 1 85 1.6E-28 T 13-10-2018 Thivi_2530 ad7b00a3f8036542a18fe15cde538740 87 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 1 67 0.002 T 13-10-2018 IPR020137 Uncharacterised protein family HI1736 Thivi_3205 6cd6d9b948d8dd2488a45e30b7deef09 348 Gene3D G3DSA:3.40.50.150 62 340 2.0E-74 T 13-10-2018 Thivi_3205 6cd6d9b948d8dd2488a45e30b7deef09 348 SUPERFAMILY SSF53335 70 339 1.69E-59 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3205 6cd6d9b948d8dd2488a45e30b7deef09 348 Pfam PF02353 Mycolic acid cyclopropane synthetase 67 330 1.1E-39 T 13-10-2018 Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 SUPERFAMILY SSF56918 4 52 7.06E-21 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 PRINTS PR00673 Light harvesting protein A chain signature 32 43 1.4E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 PRINTS PR00673 Light harvesting protein A chain signature 6 13 1.4E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 PRINTS PR00673 Light harvesting protein A chain signature 13 32 1.4E-12 T 13-10-2018 IPR018332 Antenna complex, alpha subunit Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 ProSitePatterns PS00968 Antenna complexes alpha subunits signature. 26 44 - T 13-10-2018 IPR002361 Antenna complex, alpha subunit conserved site GO:0016021|GO:0019684|GO:0019866|GO:0030077|GO:0045156 Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 Pfam PF00556 Antenna complex alpha/beta subunit 4 44 3.7E-18 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_1994 a31c4cd2e4ead0f3a6a8cf5d7329f435 64 Gene3D G3DSA:4.10.220.20 4 46 3.1E-24 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_3901 e18c59b705cd1dfd4b3af607e9dc01a0 672 Pfam PF03641 Possible lysine decarboxylase 532 661 2.3E-8 T 13-10-2018 IPR031100 LOG family Thivi_3901 e18c59b705cd1dfd4b3af607e9dc01a0 672 SUPERFAMILY SSF102405 482 664 3.97E-17 T 13-10-2018 Thivi_3901 e18c59b705cd1dfd4b3af607e9dc01a0 672 Gene3D G3DSA:3.40.50.450 468 668 1.9E-19 T 13-10-2018 Thivi_4034 5c72809499776f0693afa80027aa01a5 272 Pfam PF01061 ABC-2 type transporter 15 232 6.9E-18 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Thivi_0215 741cb6d9fb15f1c4d598b7a0f846268b 214 Gene3D G3DSA:1.20.910.10 13 213 7.2E-41 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Thivi_0215 741cb6d9fb15f1c4d598b7a0f846268b 214 SUPERFAMILY SSF48613 18 210 3.02E-34 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Thivi_0215 741cb6d9fb15f1c4d598b7a0f846268b 214 Pfam PF01126 Heme oxygenase 18 202 1.4E-12 T 13-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Thivi_2022 257873aadb79950c46cee09bc0c40f48 436 Pfam PF03109 ABC1 family 118 228 2.6E-24 T 13-10-2018 IPR004147 UbiB domain Thivi_2022 257873aadb79950c46cee09bc0c40f48 436 SUPERFAMILY SSF56112 101 315 5.31E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_1761 df26f82d4ad7e0c9f56dc43ac7500e85 236 SUPERFAMILY SSF53271 62 234 1.15E-31 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_1761 df26f82d4ad7e0c9f56dc43ac7500e85 236 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 137 236 8.0E-4 T 13-10-2018 Thivi_1761 df26f82d4ad7e0c9f56dc43ac7500e85 236 Gene3D G3DSA:3.40.50.2020 91 236 5.1E-17 T 13-10-2018 Thivi_0360 45cd73cc5f584013947c1d350350a923 263 Pfam PF02108 Flagellar assembly protein FliH 103 226 7.1E-27 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Thivi_0360 45cd73cc5f584013947c1d350350a923 263 SUPERFAMILY SSF160527 145 236 1.7E-7 T 13-10-2018 Thivi_4159 2448192c2c3e94ddafd7ee9493c8b43f 429 SUPERFAMILY SSF56935 26 429 5.23E-21 T 13-10-2018 Thivi_1165 e0d9af1d3fc1b0d26f6410cb2304bdc4 261 Pfam PF10670 Domain of unknown function (DUF4198) 25 232 2.7E-50 T 13-10-2018 IPR019613 Protein of unknown function DUF4198 Thivi_3235 75b57a7b43b81b9c02e7f124c3b6abc8 446 SUPERFAMILY SSF56112 103 342 1.75E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily Thivi_3235 75b57a7b43b81b9c02e7f124c3b6abc8 446 Pfam PF03109 ABC1 family 120 235 2.9E-27 T 13-10-2018 IPR004147 UbiB domain Thivi_2903 5e3430d7e001a8f9ade7f4182cd5303d 190 Pfam PF07298 NnrU protein 3 188 3.6E-57 T 13-10-2018 IPR009915 NnrU domain Thivi_3139 86ede2485be2cdf8617f656bb9071548 104 SUPERFAMILY SSF81296 1 102 1.68E-32 T 13-10-2018 IPR014756 Immunoglobulin E-set Thivi_3139 86ede2485be2cdf8617f656bb9071548 104 Gene3D G3DSA:2.60.40.10 2 103 5.6E-36 T 13-10-2018 IPR013783 Immunoglobulin-like fold Thivi_3139 86ede2485be2cdf8617f656bb9071548 104 Pfam PF08770 Sulphur oxidation protein SoxZ 6 99 3.6E-39 T 13-10-2018 IPR014880 Sulphur oxidation protein SoxZ Thivi_3139 86ede2485be2cdf8617f656bb9071548 104 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 5 102 1.2E-42 T 13-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 Pfam PF00482 Type II secretion system (T2SS), protein F 84 207 2.0E-29 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 2.3E-33 T 13-10-2018 IPR018076 Type II secretion system F domain Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 4.3E-18 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 4.3E-18 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 4.3E-18 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 4.3E-18 T 13-10-2018 IPR003004 GspF/PilC family Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 Gene3D G3DSA:1.20.81.30 271 382 2.1E-32 T 13-10-2018 Thivi_0241 d50b7f0c44aa4aab5590805092a495e4 418 Gene3D G3DSA:1.20.81.30 72 186 2.7E-28 T 13-10-2018 Thivi_3967 28a6041f385595766d31b7967f12ce77 239 SMART SM00479 2 175 1.3E-48 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_3967 28a6041f385595766d31b7967f12ce77 239 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 236 5.1E-91 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_3967 28a6041f385595766d31b7967f12ce77 239 SUPERFAMILY SSF53098 1 174 8.39E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_3967 28a6041f385595766d31b7967f12ce77 239 Gene3D G3DSA:3.30.420.10 1 177 2.8E-59 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_3967 28a6041f385595766d31b7967f12ce77 239 Pfam PF00929 Exonuclease 4 166 1.8E-38 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_3967 28a6041f385595766d31b7967f12ce77 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 186 5.7E-67 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Thivi_2601 d63e07e8363bad7d9070e4119f30f9f1 262 Pfam PF13614 AAA domain 3 180 3.1E-59 T 13-10-2018 IPR025669 AAA domain Thivi_2601 d63e07e8363bad7d9070e4119f30f9f1 262 Gene3D G3DSA:3.40.50.300 2 262 5.9E-78 T 13-10-2018 Thivi_2601 d63e07e8363bad7d9070e4119f30f9f1 262 PIRSF PIRSF009320 93 262 8.1E-9 T 13-10-2018 Thivi_2601 d63e07e8363bad7d9070e4119f30f9f1 262 PIRSF PIRSF009320 2 48 4.6E-15 T 13-10-2018 Thivi_2601 d63e07e8363bad7d9070e4119f30f9f1 262 SUPERFAMILY SSF52540 1 257 1.74E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0950 779ccccc7cf9d7b2aa080cdfe6b8e2df 168 Pfam PF04304 Protein of unknown function (DUF454) 20 134 5.1E-28 T 13-10-2018 IPR007401 Protein of unknown function DUF454 Thivi_3031 b5817885950c41401e22db2792465984 239 Pfam PF02678 Pirin 7 119 9.4E-38 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Thivi_3031 b5817885950c41401e22db2792465984 239 SUPERFAMILY SSF51182 1 229 2.82E-76 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily Thivi_3031 b5817885950c41401e22db2792465984 239 Gene3D G3DSA:2.60.120.10 11 135 7.1E-89 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_3031 b5817885950c41401e22db2792465984 239 PIRSF PIRSF006232 1 230 2.9E-55 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Thivi_3031 b5817885950c41401e22db2792465984 239 Gene3D G3DSA:2.60.120.10 7 232 7.1E-89 T 13-10-2018 IPR014710 RmlC-like jelly roll fold Thivi_1687 4441864f27ee2d64b57d8d7b0e5cc392 178 SUPERFAMILY SSF55083 4 101 8.11E-15 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_1687 4441864f27ee2d64b57d8d7b0e5cc392 178 Gene3D G3DSA:3.30.70.560 1 112 6.8E-14 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_1687 4441864f27ee2d64b57d8d7b0e5cc392 178 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 102 2.2E-11 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Thivi_0701 40fdfff3e05792680f7a9ec21e81d3ed 175 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 168 81.936 T 13-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Thivi_0701 40fdfff3e05792680f7a9ec21e81d3ed 175 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 2 168 4.5E-69 T 13-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria Thivi_0701 40fdfff3e05792680f7a9ec21e81d3ed 175 Pfam PF03350 Uncharacterized protein family, UPF0114 10 126 1.5E-32 T 13-10-2018 IPR005134 Uncharacterised protein family UPF0114 Thivi_0345 c3b8faf787421d09872f544475ae0646 94 Gene3D G3DSA:2.40.10.220 1 92 1.8E-12 T 13-10-2018 Thivi_0345 c3b8faf787421d09872f544475ae0646 94 SUPERFAMILY SSF141371 3 89 1.31E-12 T 13-10-2018 Thivi_0345 c3b8faf787421d09872f544475ae0646 94 Pfam PF07238 PilZ domain 5 90 2.4E-12 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_2681 1c3014dd570e413c6b0b86ec170a5590 556 Gene3D G3DSA:3.20.20.80 21 199 1.4E-14 T 13-10-2018 Thivi_2681 1c3014dd570e413c6b0b86ec170a5590 556 SUPERFAMILY SSF51445 48 391 2.64E-18 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_0965 6840eae9d0537245f94637e22fdb3d0f 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 279 5.4E-12 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Thivi_0965 6840eae9d0537245f94637e22fdb3d0f 485 SUPERFAMILY SSF51905 2 195 5.11E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Thivi_0965 6840eae9d0537245f94637e22fdb3d0f 485 Gene3D G3DSA:3.50.50.100 1 477 2.0E-98 T 13-10-2018 Thivi_3026 89542da213e7794fc33cc84c533622b8 208 Pfam PF01810 LysE type translocator 15 198 2.6E-17 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Thivi_1252 a40275b9beba13eb157f9fcf5a2eee9d 228 Pfam PF07603 Protein of unknown function (DUF1566) 31 186 5.0E-9 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 Gene3D G3DSA:3.40.1280.10 4 168 5.4E-61 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 6 238 3.2E-67 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 Pfam PF00588 SpoU rRNA Methylase family 8 157 1.9E-31 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 SUPERFAMILY SSF75217 7 167 2.55E-35 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 PIRSF PIRSF004808 2 245 4.7E-70 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Thivi_3148 136ce097f769ccb6e0b55ab66a3232df 254 Gene3D G3DSA:1.10.8.590 169 251 3.1E-26 T 13-10-2018 Thivi_2902 6089ca4c232ad55dc567f4cadd586d2f 158 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 4.2E-50 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 Thivi_2902 6089ca4c232ad55dc567f4cadd586d2f 158 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.879 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 Thivi_0531 3618eccbbac1d84e99e1b2b3a65b98d7 236 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 5.1E-11 T 13-10-2018 Thivi_0531 3618eccbbac1d84e99e1b2b3a65b98d7 236 Gene3D G3DSA:1.10.150.240 20 82 1.2E-17 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Thivi_0531 3618eccbbac1d84e99e1b2b3a65b98d7 236 SUPERFAMILY SSF56784 6 199 1.35E-20 T 13-10-2018 IPR036412 HAD-like superfamily Thivi_0531 3618eccbbac1d84e99e1b2b3a65b98d7 236 Gene3D G3DSA:3.40.50.1000 8 199 1.2E-17 T 13-10-2018 IPR023214 HAD superfamily Thivi_4361 2156f994aac6fd2d952069543f62e43b 168 SUPERFAMILY SSF50630 13 146 7.67E-42 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_4361 2156f994aac6fd2d952069543f62e43b 168 Gene3D G3DSA:2.40.70.10 11 139 5.0E-30 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily Thivi_4361 2156f994aac6fd2d952069543f62e43b 168 Pfam PF05618 Putative ATP-dependant zinc protease 12 147 3.6E-34 T 13-10-2018 Thivi_2853 631d478dcfab6d907c768e3979d67361 215 Pfam PF05137 Fimbrial assembly protein (PilN) 100 175 1.7E-20 T 13-10-2018 IPR007813 Fimbrial assembly PilN Thivi_1214 94081cf1baf4818bb1b063a2dadc0e2e 101 Pfam PF13466 STAS domain 17 94 1.7E-10 T 13-10-2018 IPR002645 STAS domain Thivi_1214 94081cf1baf4818bb1b063a2dadc0e2e 101 SUPERFAMILY SSF52091 9 99 1.24E-17 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_1214 94081cf1baf4818bb1b063a2dadc0e2e 101 Gene3D G3DSA:3.30.750.24 5 101 1.7E-17 T 13-10-2018 IPR036513 STAS domain superfamily Thivi_0821 b48d27bf55e1c106ab79c5e3f7044e6a 327 Pfam PF14261 Domain of unknown function (DUF4351) 273 324 4.3E-6 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 Thivi_0821 b48d27bf55e1c106ab79c5e3f7044e6a 327 Pfam PF04754 Putative transposase, YhgA-like 70 124 9.0E-5 T 13-10-2018 IPR006842 Transposase (putative), YhgA-like Thivi_4481 2154d1bc389d8b15dda8e8a227d06158 199 Gene3D G3DSA:1.10.760.10 26 103 2.0E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4481 2154d1bc389d8b15dda8e8a227d06158 199 SUPERFAMILY SSF46626 108 198 4.41E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4481 2154d1bc389d8b15dda8e8a227d06158 199 SUPERFAMILY SSF46626 33 102 8.02E-13 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4481 2154d1bc389d8b15dda8e8a227d06158 199 PIRSF PIRSF000005 1 199 3.5E-36 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Thivi_4481 2154d1bc389d8b15dda8e8a227d06158 199 Gene3D G3DSA:1.10.760.10 104 199 1.1E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_3982 4704e1fdd631a0706dface9407265ddc 357 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 28 357 1.3E-165 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_3982 4704e1fdd631a0706dface9407265ddc 357 PIRSF PIRSF029693 8 357 1.2E-130 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Thivi_4061 c6c8ba1e50eec318c63766ca73472257 404 SUPERFAMILY SSF56300 5 243 2.54E-40 T 13-10-2018 Thivi_4061 c6c8ba1e50eec318c63766ca73472257 404 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 7 240 6.3E-67 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA Thivi_4061 c6c8ba1e50eec318c63766ca73472257 404 Gene3D G3DSA:3.60.21.10 21 268 1.9E-10 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like Thivi_4061 c6c8ba1e50eec318c63766ca73472257 404 SMART SM00854 6 244 1.0E-78 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 2.9E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.5E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 Gene3D G3DSA:3.30.700.10 30 164 2.1E-32 T 13-10-2018 Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 SUPERFAMILY SSF54523 8 141 1.26E-22 T 13-10-2018 Thivi_2485 f6d4f9a7d2df9a668bc51502f9fa292d 164 Pfam PF00114 Pilin (bacterial filament) 36 164 7.2E-16 T 13-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 Thivi_3173 a9e39bdd5a3f0d485500692750a6a71a 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 259 3.7E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Thivi_3173 a9e39bdd5a3f0d485500692750a6a71a 272 Gene3D G3DSA:1.10.3720.10 11 264 3.2E-50 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_3173 a9e39bdd5a3f0d485500692750a6a71a 272 SUPERFAMILY SSF161098 3 262 5.14E-55 T 13-10-2018 IPR035906 MetI-like superfamily Thivi_4614 64ffe96c4407fab3d60d2a0a36c09a4b 339 SMART SM00470 37 127 0.0028 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Thivi_4614 64ffe96c4407fab3d60d2a0a36c09a4b 339 SUPERFAMILY SSF110849 33 126 6.98E-11 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Thivi_4614 64ffe96c4407fab3d60d2a0a36c09a4b 339 Pfam PF02195 ParB-like nuclease domain 66 126 3.2E-5 T 13-10-2018 IPR003115 ParB/Sulfiredoxin Thivi_3348 a5f629df9507f34345a283893be0f2ae 333 Gene3D G3DSA:1.25.40.10 226 304 3.3E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3348 a5f629df9507f34345a283893be0f2ae 333 SUPERFAMILY SSF48452 229 330 4.6E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_4087 722f008a06648f21b08fcfbc63f30adf 415 Gene3D G3DSA:1.20.1250.20 6 392 1.0E-39 T 13-10-2018 Thivi_4087 722f008a06648f21b08fcfbc63f30adf 415 Pfam PF05977 Transmembrane secretion effector 8 397 2.3E-61 T 13-10-2018 IPR010290 Transmembrane secretion effector Thivi_4087 722f008a06648f21b08fcfbc63f30adf 415 SUPERFAMILY SSF103473 11 395 1.31E-47 T 13-10-2018 IPR036259 MFS transporter superfamily Thivi_1980 7451a295c7324b25fd7e185c7e019dd3 52 Gene3D G3DSA:4.10.220.20 8 52 1.4E-19 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1980 7451a295c7324b25fd7e185c7e019dd3 52 SUPERFAMILY SSF56918 9 46 6.02E-10 T 13-10-2018 IPR035889 Light-harvesting complex Thivi_1980 7451a295c7324b25fd7e185c7e019dd3 52 Pfam PF00556 Antenna complex alpha/beta subunit 13 46 4.0E-10 T 13-10-2018 IPR000066 Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0030077|GO:0045156 Thivi_0224 c256edf4efea1ea6e0b8f195eed7f348 156 Pfam PF04073 Aminoacyl-tRNA editing domain 23 140 5.0E-24 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Thivi_0224 c256edf4efea1ea6e0b8f195eed7f348 156 Gene3D G3DSA:3.90.960.10 3 147 1.1E-39 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Thivi_0224 c256edf4efea1ea6e0b8f195eed7f348 156 SUPERFAMILY SSF55826 8 145 4.19E-29 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Thivi_3983 d9b0633d032f3cdbe7800bc664a3de3f 222 Gene3D G3DSA:3.40.50.300 4 220 1.3E-81 T 13-10-2018 Thivi_3983 d9b0633d032f3cdbe7800bc664a3de3f 222 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 90 210 4.2E-53 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Thivi_3983 d9b0633d032f3cdbe7800bc664a3de3f 222 Pfam PF01583 Adenylylsulphate kinase 26 196 1.3E-65 T 13-10-2018 Thivi_3983 d9b0633d032f3cdbe7800bc664a3de3f 222 SUPERFAMILY SSF52540 24 211 9.66E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3983 d9b0633d032f3cdbe7800bc664a3de3f 222 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 214 34.664 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Thivi_0847 b5db559e70268f0a2f54df3a09912ea3 287 SMART SM00901 54 150 2.4E-40 T 13-10-2018 IPR014966 FRG domain Thivi_0847 b5db559e70268f0a2f54df3a09912ea3 287 Pfam PF08867 FRG domain 57 144 7.1E-28 T 13-10-2018 IPR014966 FRG domain Thivi_2296 12b0650712c543c90b407000fb899fd6 182 Pfam PF13503 Domain of unknown function (DUF4123) 21 139 1.8E-26 T 13-10-2018 IPR025391 Domain of unknown function DUF4123 Thivi_0233 362fe70aef802c59ab92525c4d386251 533 Pfam PF04293 SpoVR like protein 11 443 5.3E-171 T 13-10-2018 IPR007390 Sporulation stage V, protein R Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 SUPERFAMILY SSF56931 106 357 1.31E-82 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 Gene3D G3DSA:2.40.230.10 99 358 1.0E-84 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 Pfam PF02253 Phospholipase A1 107 354 1.0E-88 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 147 164 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 327 347 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 221 235 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 271 289 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 191 210 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_1372 36bf5b9c94bce944de96c47d52743954 358 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 254 1.2E-31 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Thivi_3806 9495e13f39af127a44759e763fff8661 158 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 143 1.8E-29 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Thivi_3806 9495e13f39af127a44759e763fff8661 158 Gene3D G3DSA:3.30.420.270 61 140 3.2E-6 T 13-10-2018 Thivi_4315 96c4e6945103fdec168b168222eda2b6 263 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 75 256 3.2E-28 T 13-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein Thivi_1923 2180cdda87eaa6de375b7ce0245508e3 478 Gene3D G3DSA:3.30.70.1070 368 466 1.6E-14 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_4058 e8f93717588fb72b5fef9bb34ba2a7b7 302 Pfam PF04230 Polysaccharide pyruvyl transferase 25 270 3.0E-9 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 SUPERFAMILY SSF52172 153 272 1.42E-32 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 Gene3D G3DSA:3.40.50.12740 153 276 1.8E-36 T 13-10-2018 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 Gene3D G3DSA:3.40.50.12740 1 151 2.0E-41 T 13-10-2018 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 Pfam PF00072 Response regulator receiver domain 4 113 1.6E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 Pfam PF00072 Response regulator receiver domain 156 268 4.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 SMART SM00448 154 268 5.5E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 SMART SM00448 2 116 1.4E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Thivi_1320 965e2c3d2a12c9f860c6b903ebf054db 277 SUPERFAMILY SSF52172 1 121 1.38E-34 T 13-10-2018 IPR011006 CheY-like superfamily Thivi_1038 b4bef33ea0221462b05eba24ef769e38 103 Gene3D G3DSA:1.10.10.710 21 89 4.5E-11 T 13-10-2018 IPR038627 YebG-like superfamily Thivi_1038 b4bef33ea0221462b05eba24ef769e38 103 Pfam PF07130 YebG protein 2 76 9.4E-22 T 13-10-2018 IPR009813 Uncharacterised protein family YebG Thivi_3637 c1b15bcf7bd38df177021c7494bcf147 845 Gene3D G3DSA:3.40.1360.10 71 183 5.6E-7 T 13-10-2018 Thivi_3637 c1b15bcf7bd38df177021c7494bcf147 845 SUPERFAMILY SSF56731 31 155 5.75E-5 T 13-10-2018 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 PIRSF PIRSF000071 1 54 5.5E-25 T 13-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 Gene3D G3DSA:2.20.28.10 1 54 2.5E-27 T 13-10-2018 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 Pfam PF00301 Rubredoxin 4 49 5.2E-23 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 SUPERFAMILY SSF57802 1 53 4.04E-22 T 13-10-2018 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 PRINTS PR00163 Rubredoxin signature 33 49 1.9E-8 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Thivi_3079 fb73fa85faf9308770c45b953b100a1a 54 PRINTS PR00163 Rubredoxin signature 3 19 1.9E-8 T 13-10-2018 IPR024935 Rubredoxin domain GO:0005506 Thivi_2855 41102050a5a4418480610c52c3b4404e 174 PIRSF PIRSF016481 2 174 6.2E-46 T 13-10-2018 IPR007446 Pilus assembly protein PilP Thivi_2855 41102050a5a4418480610c52c3b4404e 174 Pfam PF04351 Pilus assembly protein, PilP 27 172 2.2E-51 T 13-10-2018 IPR007446 Pilus assembly protein PilP Thivi_2855 41102050a5a4418480610c52c3b4404e 174 Gene3D G3DSA:2.30.30.830 81 173 2.6E-34 T 13-10-2018 Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 Pfam PF16234 Domain of unknown function (DUF4892) 30 129 6.9E-10 T 13-10-2018 IPR032608 Protein of unknown function DUF4892 Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 Pfam PF00691 OmpA family 237 332 5.2E-19 T 13-10-2018 IPR006665 OmpA-like domain Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 Gene3D G3DSA:3.30.1330.60 219 339 7.4E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 PRINTS PR01021 OMPA domain signature 267 282 1.4E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 PRINTS PR01021 OMPA domain signature 282 298 1.4E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 PRINTS PR01021 OMPA domain signature 237 259 1.4E-14 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Thivi_3739 8334e1b915adccca20dce405e3ed7381 339 SUPERFAMILY SSF103088 229 337 5.1E-33 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_4419 8151903d40208cd44ad3707e68b90a53 561 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 377 510 5.3E-32 T 13-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit Thivi_4419 8151903d40208cd44ad3707e68b90a53 561 Gene3D G3DSA:3.40.50.300 34 217 1.3E-9 T 13-10-2018 Thivi_2579 3b00ded3a35ebf828236589b19dd4792 878 Gene3D G3DSA:3.90.550.10 409 632 9.1E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2579 3b00ded3a35ebf828236589b19dd4792 878 Pfam PF13641 Glycosyltransferase like family 2 419 648 4.4E-32 T 13-10-2018 Thivi_2579 3b00ded3a35ebf828236589b19dd4792 878 SUPERFAMILY SSF51445 36 300 1.84E-46 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily Thivi_2579 3b00ded3a35ebf828236589b19dd4792 878 SUPERFAMILY SSF53448 402 672 4.88E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Thivi_2579 3b00ded3a35ebf828236589b19dd4792 878 Gene3D G3DSA:3.20.20.80 106 306 2.2E-13 T 13-10-2018 Thivi_4282 2fe533ae3b34295f43bdb640104362e0 306 SUPERFAMILY SSF53795 116 279 3.36E-15 T 13-10-2018 Thivi_4282 2fe533ae3b34295f43bdb640104362e0 306 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 22 300 7.7E-120 T 13-10-2018 IPR027600 HprK-related kinase A Thivi_1054 67f5ab3eff9c07b4dbc702a56459471c 590 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 340 366 6.1E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1054 67f5ab3eff9c07b4dbc702a56459471c 590 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 191 215 6.1E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1054 67f5ab3eff9c07b4dbc702a56459471c 590 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 124 148 6.1E-8 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_1054 67f5ab3eff9c07b4dbc702a56459471c 590 Pfam PF00361 Proton-conducting membrane transporter 89 379 1.7E-53 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_2518 0281e1402793c60cdd416034b41a3561 297 SUPERFAMILY SSF53807 20 296 8.83E-45 T 13-10-2018 Thivi_2518 0281e1402793c60cdd416034b41a3561 297 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 295 1.6E-33 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Thivi_2518 0281e1402793c60cdd416034b41a3561 297 Gene3D G3DSA:3.40.50.1980 23 189 6.2E-29 T 13-10-2018 Thivi_0996 3a875b91fde449fcaf6c39fef88e9534 146 Pfam PF08974 Domain of unknown function (DUF1877) 1 143 6.8E-10 T 13-10-2018 IPR015068 Protein of unknown function DUF1877 Thivi_0996 3a875b91fde449fcaf6c39fef88e9534 146 Gene3D G3DSA:3.40.1760.10 1 144 4.9E-6 T 13-10-2018 IPR035944 YfbM-like super family Thivi_0996 3a875b91fde449fcaf6c39fef88e9534 146 SUPERFAMILY SSF111069 6 144 1.7E-11 T 13-10-2018 IPR035944 YfbM-like super family Thivi_3061 7f1f47e18fddaa3f530670fdb0550df5 77 Pfam PF13711 Domain of unknown function (DUF4160) 10 72 1.5E-18 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_1298 42f4b7f3cd416490f9352dac035456e7 307 Pfam PF02371 Transposase IS116/IS110/IS902 family 255 296 3.7E-8 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Thivi_1298 42f4b7f3cd416490f9352dac035456e7 307 Pfam PF01548 Transposase 11 157 2.1E-22 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Thivi_4120 6707189e6b2568bce0cd2b2e160828d1 172 Gene3D G3DSA:3.30.1330.200 2 163 2.8E-42 T 13-10-2018 IPR038592 CheD-like superfamily Thivi_4120 6707189e6b2568bce0cd2b2e160828d1 172 SUPERFAMILY SSF64438 4 157 2.29E-35 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thivi_4120 6707189e6b2568bce0cd2b2e160828d1 172 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 158 20.958 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_4120 6707189e6b2568bce0cd2b2e160828d1 172 Pfam PF03975 CheD chemotactic sensory transduction 46 153 9.5E-23 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Thivi_2558 3b82ecb4427e72ea7d8c8a46003781a5 144 Pfam PF04972 BON domain 77 144 2.0E-17 T 13-10-2018 IPR007055 BON domain Thivi_1553 dcba59dd2f2d7bd5807949b2b1c1a0bc 672 Pfam PF06048 Domain of unknown function (DUF927) 116 390 1.8E-91 T 13-10-2018 IPR009270 Domain of unknown function DUF927 Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 SUPERFAMILY SSF53300 60 239 1.45E-19 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 SMART SM00327 62 243 1.7E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 Gene3D G3DSA:3.40.50.410 59 226 6.3E-19 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 Pfam PF13519 von Willebrand factor type A domain 65 187 5.8E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 PRINTS PR00453 Von Willebrand factor type A domain signature 180 188 1.6E-5 T 13-10-2018 Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 PRINTS PR00453 Von Willebrand factor type A domain signature 114 128 1.6E-5 T 13-10-2018 Thivi_3295 c211e9f82cd7b9034e8bdb01977cccc8 354 PRINTS PR00453 Von Willebrand factor type A domain signature 63 80 1.6E-5 T 13-10-2018 Thivi_0895 c9211c203c8279056b7357285a16db17 225 Pfam PF01464 Transglycosylase SLT domain 97 194 4.3E-28 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 Thivi_0895 c9211c203c8279056b7357285a16db17 225 Pfam PF13511 Domain of unknown function (DUF4124) 18 46 8.5E-6 T 13-10-2018 IPR025392 Domain of unknown function DUF4124 Thivi_0895 c9211c203c8279056b7357285a16db17 225 Gene3D G3DSA:1.10.530.10 55 216 1.6E-42 T 13-10-2018 Thivi_0895 c9211c203c8279056b7357285a16db17 225 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 113 141 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Thivi_0895 c9211c203c8279056b7357285a16db17 225 SUPERFAMILY SSF53955 86 212 5.32E-44 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_3696 bf65dee69c5be5a202957c83f1eca562 396 Pfam PF00374 Nickel-dependent hydrogenase 309 352 6.5E-7 T 13-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Thivi_3696 bf65dee69c5be5a202957c83f1eca562 396 SUPERFAMILY SSF56762 35 387 2.24E-36 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3696 bf65dee69c5be5a202957c83f1eca562 396 Gene3D G3DSA:1.10.645.10 220 387 1.9E-18 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_3565 791db54b3180a1c09f7e7944d9a47426 138 Pfam PF17228 Sulphur globule protein 26 137 7.7E-20 T 13-10-2018 IPR035173 Sulphur globule protein Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 Gene3D G3DSA:2.70.98.90 79 348 7.2E-85 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 367 6.2E-103 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR01900 YidC translocation/secretion protein signature 483 498 1.7E-24 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR01900 YidC translocation/secretion protein signature 502 526 1.7E-24 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR01900 YidC translocation/secretion protein signature 354 370 1.7E-24 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 Pfam PF02096 60Kd inner membrane protein 369 546 5.4E-61 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 233 251 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 266 281 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 430 453 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 477 499 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 88 109 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 513 536 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 179 199 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 PRINTS PR00701 60kDa inner membrane protein signature 339 359 3.5E-80 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 549 24.043 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 Pfam PF14849 YidC periplasmic domain 82 358 8.6E-78 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Thivi_3007 d07ff34371da8f4da54bc5bc0ebccae8 558 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 368 547 2.9E-71 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Thivi_1806 88a4c6343b1dce353f924da076d7f890 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 352 2.3E-64 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Thivi_1806 88a4c6343b1dce353f924da076d7f890 354 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 353 2.2E-108 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Thivi_2288 edf5131801acb7835e5477cc02155d8f 162 SUPERFAMILY SSF141452 2 160 9.29E-58 T 13-10-2018 IPR036624 Hcp1-like superfamily Thivi_2288 edf5131801acb7835e5477cc02155d8f 162 Gene3D G3DSA:2.30.110.20 1 162 8.5E-70 T 13-10-2018 IPR036624 Hcp1-like superfamily Thivi_2288 edf5131801acb7835e5477cc02155d8f 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 6.3E-42 T 13-10-2018 IPR008514 Type VI secretion system effector, Hcp Thivi_0315 c093e8f00e77427920d80737ece50cc0 204 Pfam PF13690 Chemotaxis phosphatase CheX 65 142 5.6E-8 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Thivi_0315 c093e8f00e77427920d80737ece50cc0 204 SUPERFAMILY SSF103039 3 194 6.15E-40 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_0315 c093e8f00e77427920d80737ece50cc0 204 Pfam PF04509 CheC-like family 7 43 1.1E-4 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 Thivi_0315 c093e8f00e77427920d80737ece50cc0 204 Gene3D G3DSA:3.40.1550.10 2 195 3.7E-48 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_0127 81bf468bc8608b1fef5fc651f531a84f 406 SUPERFAMILY SSF53756 4 305 3.14E-12 T 13-10-2018 Thivi_3491 76a84b8676be608f18715d18db6d3aed 611 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 17 611 1.3E-79 T 13-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB Thivi_3491 76a84b8676be608f18715d18db6d3aed 611 SUPERFAMILY SSF56935 332 610 1.06E-6 T 13-10-2018 Thivi_2977 85b5dea06c259492ce4e7b94239e38f1 151 Pfam PF04314 Copper chaperone PCu(A)C 27 133 9.7E-39 T 13-10-2018 IPR007410 Copper chaperone PCuAC Thivi_2977 85b5dea06c259492ce4e7b94239e38f1 151 Gene3D G3DSA:2.60.40.1890 31 144 3.1E-42 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily Thivi_2977 85b5dea06c259492ce4e7b94239e38f1 151 SUPERFAMILY SSF110087 5 142 3.92E-47 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily Thivi_2017 dcea730a823f829ac40129429efc6feb 158 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 154 1.2E-21 T 13-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane Thivi_2816 bbf759920f513ed7e0c46dda13b3d578 275 SUPERFAMILY SSF56726 129 203 2.62E-7 T 13-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 Thivi_0892 a8668a8e0e7d1626a0dab7e2eb99cd23 284 Pfam PF01569 PAP2 superfamily 102 217 3.2E-18 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_0892 a8668a8e0e7d1626a0dab7e2eb99cd23 284 Gene3D G3DSA:1.20.144.10 135 228 2.1E-16 T 13-10-2018 Thivi_0892 a8668a8e0e7d1626a0dab7e2eb99cd23 284 SMART SM00014 103 213 8.0E-6 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thivi_0892 a8668a8e0e7d1626a0dab7e2eb99cd23 284 SUPERFAMILY SSF48317 39 219 1.1E-27 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Thivi_1878 f5eec6f550a010793bbbc526f380cc57 612 Gene3D G3DSA:1.20.1730.10 385 602 5.6E-27 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_1878 f5eec6f550a010793bbbc526f380cc57 612 Gene3D G3DSA:1.20.1730.10 29 348 2.1E-45 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily Thivi_1878 f5eec6f550a010793bbbc526f380cc57 612 Pfam PF00474 Sodium:solute symporter family 388 532 4.4E-17 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_1878 f5eec6f550a010793bbbc526f380cc57 612 Pfam PF00474 Sodium:solute symporter family 39 348 2.3E-39 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Thivi_1106 e66470cb7ed5ba722cac06784757777c 222 Pfam PF13358 DDE superfamily endonuclease 31 182 4.8E-23 T 13-10-2018 IPR038717 Tc1-like transposase, DDE domain Thivi_4624 64cfcc86ffee0307a921649d1b344cf2 65 Pfam PF14255 Cysteine-rich CPXCG 10 55 2.7E-19 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein Thivi_4624 64cfcc86ffee0307a921649d1b344cf2 65 PIRSF PIRSF037225 1 64 5.7E-20 T 13-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 Thivi_1121 84d5d26308ac4a0b8090c61420f854e6 747 Gene3D G3DSA:2.60.450.10 47 148 1.1E-5 T 13-10-2018 Thivi_1121 84d5d26308ac4a0b8090c61420f854e6 747 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 42 728 19.224 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Thivi_1121 84d5d26308ac4a0b8090c61420f854e6 747 Pfam PF04453 Organic solvent tolerance protein 299 665 1.1E-80 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Thivi_1121 84d5d26308ac4a0b8090c61420f854e6 747 Pfam PF03968 OstA-like protein 58 189 3.3E-6 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Thivi_3898 7da54e1ffe83721832a929d4fbe4872f 415 Pfam PF03600 Citrate transporter 26 353 1.6E-29 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Thivi_3898 7da54e1ffe83721832a929d4fbe4872f 415 PRINTS PR00758 Arsenical pump membrane protein signature 274 298 2.5E-9 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3898 7da54e1ffe83721832a929d4fbe4872f 415 PRINTS PR00758 Arsenical pump membrane protein signature 102 126 2.5E-9 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3898 7da54e1ffe83721832a929d4fbe4872f 415 PRINTS PR00758 Arsenical pump membrane protein signature 317 339 2.5E-9 T 13-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Thivi_3631 3ae82bc4fa01897220dd0fd8b340c779 184 SUPERFAMILY SSF46689 31 140 9.32E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_3631 3ae82bc4fa01897220dd0fd8b340c779 184 Pfam PF08765 Mor transcription activator family 70 143 5.6E-7 T 13-10-2018 IPR014875 Mor transcription activator Thivi_0354 9b90868637583d9cc1a991989b5e2561 94 Pfam PF10719 Late competence development protein ComFB 7 85 2.2E-19 T 13-10-2018 IPR019657 Late competence development protein ComFB Thivi_1715 890e698cd65883ecddae7a0fa9ca2cc9 386 Pfam PF05940 NnrS protein 7 380 3.5E-103 T 13-10-2018 IPR010266 NnrS Thivi_1585 5dca9a7dc05a76ce6fe16f35e9c03e7f 1084 Pfam PF13362 Toprim domain 362 457 5.2E-7 T 13-10-2018 IPR006171 TOPRIM domain Thivi_1585 5dca9a7dc05a76ce6fe16f35e9c03e7f 1084 Pfam PF06048 Domain of unknown function (DUF927) 528 806 1.2E-90 T 13-10-2018 IPR009270 Domain of unknown function DUF927 Thivi_1585 5dca9a7dc05a76ce6fe16f35e9c03e7f 1084 Pfam PF08707 Primase C terminal 2 (PriCT-2) 134 205 7.0E-18 T 13-10-2018 IPR014819 Primase, C-terminal 2 GO:0016817 Thivi_0414 90785817910a592ee6fd9d32dbca0e6e 73 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 17 72 4.9E-18 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 Thivi_2131 3f258f7b9b048d522d819672013da891 94 SUPERFAMILY SSF54292 4 92 1.97E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Thivi_2131 3f258f7b9b048d522d819672013da891 94 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Thivi_2131 3f258f7b9b048d522d819672013da891 94 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 84 9.2E-14 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Thivi_2131 3f258f7b9b048d522d819672013da891 94 Gene3D G3DSA:3.10.20.30 1 94 1.9E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily Thivi_2499 d5fa0c270135650f831ec5cc38fd70ab 80 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 80 26.998 T 13-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 Thivi_2499 d5fa0c270135650f831ec5cc38fd70ab 80 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 79 3.9E-18 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Thivi_2499 d5fa0c270135650f831ec5cc38fd70ab 80 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 77 5.9E-17 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Thivi_1051 bc2ed5356583cb17f839aeb8a755cf04 255 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 111 232 1.1E-21 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thivi_2626 53e00b2a9479a785d57f602288abd7f0 584 Pfam PF00149 Calcineurin-like phosphoesterase 44 310 9.0E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Thivi_2626 53e00b2a9479a785d57f602288abd7f0 584 SUPERFAMILY SSF56300 42 378 9.16E-25 T 13-10-2018 Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 216 3.1E-43 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 SUPERFAMILY SSF109755 9 220 6.7E-47 T 13-10-2018 Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 Gene3D G3DSA:1.20.58.220 8 221 1.2E-49 T 13-10-2018 IPR038078 PhoU-like domain superfamily Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 PIRSF PIRSF003107 6 221 7.2E-47 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 Pfam PF01895 PhoU domain 128 208 1.0E-12 T 13-10-2018 IPR026022 PhoU domain Thivi_2126 287865de06c8472a6dfbfe9ad1baceb7 221 Pfam PF01895 PhoU domain 21 105 9.8E-14 T 13-10-2018 IPR026022 PhoU domain Thivi_3283 9825409207e40f8124806e8854f77399 772 SUPERFAMILY SSF48452 237 419 4.17E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3283 9825409207e40f8124806e8854f77399 772 Gene3D G3DSA:1.25.40.10 187 511 7.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_3651 f5a648af1e8a4f5655fb125c85e1e618 66 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_3651 f5a648af1e8a4f5655fb125c85e1e618 66 SUPERFAMILY SSF54862 5 60 2.97E-10 T 13-10-2018 Thivi_3651 f5a648af1e8a4f5655fb125c85e1e618 66 Gene3D G3DSA:3.30.70.20 3 66 9.6E-13 T 13-10-2018 Thivi_3651 f5a648af1e8a4f5655fb125c85e1e618 66 Pfam PF00037 4Fe-4S binding domain 4 26 6.4E-6 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_3446 c802ae9850bdb661122cf827af85e970 131 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 127 7.0E-26 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Thivi_3446 c802ae9850bdb661122cf827af85e970 131 Gene3D G3DSA:3.30.420.270 58 124 8.6E-6 T 13-10-2018 Thivi_3960 9077dca69a80db8643a16c464a483357 210 SUPERFAMILY SSF52540 3 207 1.49E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3960 9077dca69a80db8643a16c464a483357 210 Gene3D G3DSA:3.40.50.300 1 205 2.0E-36 T 13-10-2018 Thivi_3960 9077dca69a80db8643a16c464a483357 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 180 3.6E-14 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thivi_3960 9077dca69a80db8643a16c464a483357 210 PIRSF PIRSF009320 1 208 7.6E-29 T 13-10-2018 Thivi_4032 8a80b2c1a953f314b2e32f45080d53b2 399 Pfam PF13439 Glycosyltransferase Family 4 71 201 3.1E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Thivi_4032 8a80b2c1a953f314b2e32f45080d53b2 399 Pfam PF00534 Glycosyl transferases group 1 206 376 6.1E-36 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 Thivi_4032 8a80b2c1a953f314b2e32f45080d53b2 399 Gene3D G3DSA:3.40.50.2000 40 208 5.5E-23 T 13-10-2018 Thivi_4032 8a80b2c1a953f314b2e32f45080d53b2 399 Gene3D G3DSA:3.40.50.2000 209 382 9.7E-44 T 13-10-2018 Thivi_4032 8a80b2c1a953f314b2e32f45080d53b2 399 SUPERFAMILY SSF53756 72 394 8.79E-74 T 13-10-2018 Thivi_3378 dc59caa81ca280dab7da29c5d19bf054 161 Pfam PF01967 MoaC family 14 149 2.0E-52 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_3378 dc59caa81ca280dab7da29c5d19bf054 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 150 1.3E-58 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_3378 dc59caa81ca280dab7da29c5d19bf054 161 Gene3D G3DSA:3.30.70.640 1 159 3.8E-65 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_3378 dc59caa81ca280dab7da29c5d19bf054 161 SUPERFAMILY SSF55040 10 154 2.22E-58 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_3378 dc59caa81ca280dab7da29c5d19bf054 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 157 35.236 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Thivi_1706 d72cfecb692fe9d805948003f8b343b1 923 Gene3D G3DSA:3.40.50.300 140 437 2.4E-19 T 13-10-2018 Thivi_1706 d72cfecb692fe9d805948003f8b343b1 923 Pfam PF13614 AAA domain 145 342 2.2E-6 T 13-10-2018 IPR025669 AAA domain Thivi_1706 d72cfecb692fe9d805948003f8b343b1 923 SUPERFAMILY SSF52540 143 341 8.42E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1785 5a1bd79125ba9f7f9607ee96ec4ea768 70 SUPERFAMILY SSF143100 6 54 5.23E-8 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like Thivi_3140 e0b34a8a070694f8468a1ffd76173e1f 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 23 295 8.4E-48 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Thivi_3140 e0b34a8a070694f8468a1ffd76173e1f 325 PIRSF PIRSF026649 1 304 3.0E-79 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Thivi_0110 f80211802b02ac65456fc79217cc850f 351 SUPERFAMILY SSF53098 30 309 9.86E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_1443 f80211802b02ac65456fc79217cc850f 351 SUPERFAMILY SSF53098 30 309 9.86E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0678 d496303986a8ae80f39309aa50fe59d1 402 Gene3D G3DSA:3.40.50.12170 1 402 4.7E-92 T 13-10-2018 Thivi_0678 d496303986a8ae80f39309aa50fe59d1 402 Pfam PF07075 Protein of unknown function (DUF1343) 24 401 5.3E-101 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Thivi_0678 d496303986a8ae80f39309aa50fe59d1 402 PIRSF PIRSF016719 1 402 1.4E-90 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Thivi_0923 e3fd0b02ca171e91d4c8bf625c92fb54 214 Gene3D G3DSA:3.20.19.10 1 184 4.6E-72 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Thivi_0923 e3fd0b02ca171e91d4c8bf625c92fb54 214 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.3E-76 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Thivi_0923 e3fd0b02ca171e91d4c8bf625c92fb54 214 Pfam PF00694 Aconitase C-terminal domain 1 131 8.7E-34 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Thivi_0923 e3fd0b02ca171e91d4c8bf625c92fb54 214 SUPERFAMILY SSF52016 1 204 4.71E-59 T 13-10-2018 Thivi_0923 e3fd0b02ca171e91d4c8bf625c92fb54 214 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 41.478 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Thivi_1427 f6a2659dcae658e3ed75d7afd3bd3ae2 80 Gene3D G3DSA:2.10.260.10 5 72 2.4E-11 T 13-10-2018 Thivi_1427 f6a2659dcae658e3ed75d7afd3bd3ae2 80 SUPERFAMILY SSF89447 6 62 1.15E-9 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_1427 f6a2659dcae658e3ed75d7afd3bd3ae2 80 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 51 1.7E-6 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_1427 f6a2659dcae658e3ed75d7afd3bd3ae2 80 SMART SM00966 10 50 0.0018 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_0349 206e2b41b1e926acaf362fc9b5e17923 257 Gene3D G3DSA:3.30.1330.60 48 228 6.2E-20 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0349 206e2b41b1e926acaf362fc9b5e17923 257 SUPERFAMILY SSF103088 98 222 1.57E-15 T 13-10-2018 IPR036737 OmpA-like domain superfamily Thivi_0349 206e2b41b1e926acaf362fc9b5e17923 257 Pfam PF00691 OmpA family 101 211 1.9E-10 T 13-10-2018 IPR006665 OmpA-like domain Thivi_0440 1233c293afc30332213d6c4215185c4a 514 Pfam PF01926 50S ribosome-binding GTPase 285 380 1.7E-12 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_0440 1233c293afc30332213d6c4215185c4a 514 Gene3D G3DSA:3.40.50.300 263 446 3.5E-23 T 13-10-2018 Thivi_0440 1233c293afc30332213d6c4215185c4a 514 SUPERFAMILY SSF52540 278 412 6.38E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3252 0fb66fc1f644309895e3003d35f56430 273 Pfam PF02405 Permease MlaE 63 269 7.7E-42 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Thivi_3736 5dd34bfd4db187da556a933c3209a6bc 159 SUPERFAMILY SSF88723 5 128 5.89E-6 T 13-10-2018 IPR029060 PIN-like domain superfamily Thivi_2737 44f25857c822ee39e91ce06147d516bc 166 PIRSF PIRSF004923 8 157 7.6E-35 T 13-10-2018 IPR026268 Protein RseC Thivi_2737 44f25857c822ee39e91ce06147d516bc 166 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 15 147 2.4E-32 T 13-10-2018 Thivi_0245 675ef07295ed51e972b3c44d870c97d7 225 SUPERFAMILY SSF53098 33 210 1.96E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_0245 675ef07295ed51e972b3c44d870c97d7 225 SMART SM00479 40 214 8.8E-20 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_0245 675ef07295ed51e972b3c44d870c97d7 225 Pfam PF00929 Exonuclease 43 205 1.2E-14 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Thivi_0245 675ef07295ed51e972b3c44d870c97d7 225 Gene3D G3DSA:3.30.420.10 35 214 8.6E-33 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Thivi_2512 865ba1b0be4dddaa39c6f6eeb8f5fc59 300 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 34.824 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Thivi_2512 865ba1b0be4dddaa39c6f6eeb8f5fc59 300 Pfam PF04381 Putative exonuclease, RdgC 2 295 7.2E-111 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 119 1.1E-24 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 PIRSF PIRSF000190 2 215 5.8E-81 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 215 1.6E-87 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 SUPERFAMILY SSF50475 17 215 4.46E-69 T 13-10-2018 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 Gene3D G3DSA:2.30.110.10 15 215 1.2E-82 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 39.513 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 173 215 9.6E-22 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_3994 41928a263a0b257b4719ee1aac544588 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 183 196 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Thivi_0853 58a5c2d0b89328a0873f36c547001408 267 Gene3D G3DSA:3.90.1580.10 22 260 6.8E-72 T 13-10-2018 Thivi_0853 58a5c2d0b89328a0873f36c547001408 267 SUPERFAMILY SSF56436 29 262 6.83E-67 T 13-10-2018 IPR016187 C-type lectin fold Thivi_0853 58a5c2d0b89328a0873f36c547001408 267 Pfam PF03781 Sulfatase-modifying factor enzyme 1 35 259 3.6E-45 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Thivi_3279 22dcfcbc8625005bcf1a6cefabcf61df 76 Pfam PF11154 Protein of unknown function (DUF2934) 13 49 2.9E-14 T 13-10-2018 IPR021327 Protein of unknown function DUF2934 Thivi_1291 6668e254ae521e122edaad74a1821fbc 62 Pfam PF10636 Hemin uptake protein hemP 27 62 4.6E-16 T 13-10-2018 IPR019600 Hemin uptake protein HemP Thivi_1291 6668e254ae521e122edaad74a1821fbc 62 Gene3D G3DSA:2.10.70.10 23 62 5.9E-14 T 13-10-2018 Thivi_3598 83220879c0456033e8841cef8da0533f 104 SUPERFAMILY SSF52833 4 102 1.57E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily Thivi_3598 83220879c0456033e8841cef8da0533f 104 Gene3D G3DSA:3.40.30.10 5 104 2.9E-28 T 13-10-2018 Thivi_3136 c728afc3e13045ab79ddd3ccfa6c4edb 423 Pfam PF13203 Putative metallopeptidase domain 13 291 3.0E-47 T 13-10-2018 IPR025154 Putative metallopeptidase domain Thivi_3136 c728afc3e13045ab79ddd3ccfa6c4edb 423 Pfam PF09967 VWA-like domain (DUF2201) 298 422 2.3E-23 T 13-10-2018 IPR018698 VWA-like domain Thivi_3136 c728afc3e13045ab79ddd3ccfa6c4edb 423 SUPERFAMILY SSF53300 295 397 9.3E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Thivi_4467 b31fc7b84b9986ca5684f54da3979c68 274 Gene3D G3DSA:3.90.10.10 137 202 5.1E-7 T 13-10-2018 Thivi_4467 b31fc7b84b9986ca5684f54da3979c68 274 Gene3D G3DSA:3.90.10.10 33 114 1.0E-5 T 13-10-2018 Thivi_4467 b31fc7b84b9986ca5684f54da3979c68 274 SUPERFAMILY SSF48695 6 225 5.14E-23 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily Thivi_3068 03ab5cb53c00835b4cae9c81621b643d 157 SUPERFAMILY SSF82093 29 135 6.15E-39 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Thivi_3068 03ab5cb53c00835b4cae9c81621b643d 157 Gene3D G3DSA:2.40.50.140 29 136 1.4E-38 T 13-10-2018 Thivi_3068 03ab5cb53c00835b4cae9c81621b643d 157 Pfam PF03100 CcmE 4 130 8.7E-45 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Thivi_3068 03ab5cb53c00835b4cae9c81621b643d 157 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 31.586 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.6E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.6E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.6E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.6E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 SUPERFAMILY SSF51735 8 259 6.75E-60 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.2E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 Pfam PF00106 short chain dehydrogenase 9 190 2.5E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Thivi_0488 0a8974cf42cfbe5f114e63bb72ba1236 284 Gene3D G3DSA:3.40.50.720 7 261 1.8E-62 T 13-10-2018 Thivi_1117 2eab8858644dacddd4f973a750c96cc9 229 Gene3D G3DSA:3.30.565.10 72 229 3.3E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1117 2eab8858644dacddd4f973a750c96cc9 229 SUPERFAMILY SSF55874 58 229 4.93E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_1670 18ce421951a36d1cb0a227a6a0033fb7 293 SUPERFAMILY SSF52540 13 202 7.98E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2570 1421d7a42d04226ff2bde5c380b0e019 190 SUPERFAMILY SSF46689 29 157 1.76E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_2570 1421d7a42d04226ff2bde5c380b0e019 190 Pfam PF13565 Homeodomain-like domain 64 155 3.3E-9 T 13-10-2018 Thivi_4534 0f5b194f71febbd56c7f568e74f3aea6 286 Gene3D G3DSA:3.40.50.1820 97 280 4.3E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_4534 0f5b194f71febbd56c7f568e74f3aea6 286 SUPERFAMILY SSF53474 115 279 4.86E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_2974 99f6a82bc82703cfa184b75f555737c7 211 Pfam PF00484 Carbonic anhydrase 48 202 9.8E-40 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Thivi_2974 99f6a82bc82703cfa184b75f555737c7 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 53 60 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Thivi_2974 99f6a82bc82703cfa184b75f555737c7 211 SMART SM00947 41 206 6.0E-51 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Thivi_2974 99f6a82bc82703cfa184b75f555737c7 211 SUPERFAMILY SSF53056 5 206 1.57E-51 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Thivi_2974 99f6a82bc82703cfa184b75f555737c7 211 Gene3D G3DSA:3.40.1050.10 1 210 7.4E-60 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Thivi_0928 d33da2b6f36ba7db06af512d1d89a961 398 Pfam PF12704 MacB-like periplasmic core domain 21 241 3.9E-33 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_0928 d33da2b6f36ba7db06af512d1d89a961 398 Pfam PF02687 FtsX-like permease family 302 391 1.1E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_0856 f6fb40d216eaabb6b674a41f99b3d86d 353 SUPERFAMILY SSF110296 32 308 4.19E-5 T 13-10-2018 Thivi_1965 15df0ae311eca99a3a35f37f9734e945 461 Pfam PF09822 ABC-type uncharacterized transport system 46 267 9.0E-27 T 13-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 Thivi_1965 15df0ae311eca99a3a35f37f9734e945 461 SUPERFAMILY SSF52317 158 407 8.7E-7 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like Thivi_2252 475ff68e083e1b83896036def498891b 246 Gene3D G3DSA:2.50.20.10 77 242 7.9E-6 T 13-10-2018 Thivi_3262 d36736c7229a97afd6883e0f54e718ba 268 Pfam PF00005 ABC transporter 47 193 1.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Thivi_3262 d36736c7229a97afd6883e0f54e718ba 268 SUPERFAMILY SSF52540 26 238 2.71E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_3262 d36736c7229a97afd6883e0f54e718ba 268 SMART SM00382 56 240 3.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain Thivi_3262 d36736c7229a97afd6883e0f54e718ba 268 Gene3D G3DSA:3.40.50.300 24 268 1.2E-61 T 13-10-2018 Thivi_3262 d36736c7229a97afd6883e0f54e718ba 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Thivi_4089 85cf0e1ca2a88d6c9c378058e9d27fbd 296 Gene3D G3DSA:3.40.1090.10 1 100 5.7E-13 T 13-10-2018 Thivi_4089 85cf0e1ca2a88d6c9c378058e9d27fbd 296 Gene3D G3DSA:3.40.1090.10 101 244 2.3E-9 T 13-10-2018 Thivi_4089 85cf0e1ca2a88d6c9c378058e9d27fbd 296 SUPERFAMILY SSF52151 10 223 3.4E-36 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_4089 85cf0e1ca2a88d6c9c378058e9d27fbd 296 Pfam PF01734 Patatin-like phospholipase 16 188 1.3E-13 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Thivi_0457 8460df4d72dd67a46b12be31b7126c9d 517 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 2 462 2.8E-102 T 13-10-2018 IPR013381 CRISPR-associated protein Cse1 Thivi_0457 8460df4d72dd67a46b12be31b7126c9d 517 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 2 473 1.9E-82 T 13-10-2018 IPR013381 CRISPR-associated protein Cse1 Thivi_0441 aad7a4307b46c1a4be5c3db6cded5217 413 Pfam PF05128 Domain of unknown function (DUF697) 262 399 7.7E-7 T 13-10-2018 IPR021147 Protein of unknown function DUF697 Thivi_0441 aad7a4307b46c1a4be5c3db6cded5217 413 Gene3D G3DSA:3.40.50.300 40 160 6.4E-12 T 13-10-2018 Thivi_0441 aad7a4307b46c1a4be5c3db6cded5217 413 SUPERFAMILY SSF52540 37 158 1.8E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_0441 aad7a4307b46c1a4be5c3db6cded5217 413 Pfam PF01926 50S ribosome-binding GTPase 46 137 3.5E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 Thivi_4103 7592dcff3515236f9210cdcc22735f1a 483 SUPERFAMILY SSF111283 20 478 7.59E-128 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Thivi_4103 7592dcff3515236f9210cdcc22735f1a 483 PIRSF PIRSF004919 17 479 1.9E-139 T 13-10-2018 IPR025502 TldD Thivi_4103 7592dcff3515236f9210cdcc22735f1a 483 Gene3D G3DSA:3.30.2290.10 11 238 3.3E-15 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Thivi_4103 7592dcff3515236f9210cdcc22735f1a 483 Pfam PF01523 Putative modulator of DNA gyrase 38 329 5.8E-66 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Thivi_1814 c353df85de73b0a7f36e3179cb1dc0bb 465 Pfam PF13701 Transposase DDE domain group 1 12 454 1.1E-150 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_1532 219425016f73713b3614131d0c3c2cbf 48 SUPERFAMILY SSF47413 4 45 5.34E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1532 219425016f73713b3614131d0c3c2cbf 48 Gene3D G3DSA:1.10.260.40 2 47 8.0E-8 T 13-10-2018 Thivi_1532 219425016f73713b3614131d0c3c2cbf 48 Pfam PF14549 DNA-binding transcriptional regulator Cro 3 44 5.6E-9 T 13-10-2018 Thivi_3051 7dfc055c4af5c76029664706fbccbced 95 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 6 93 1.2E-39 T 13-10-2018 IPR030907 Ferritin-like protein Thivi_3051 7dfc055c4af5c76029664706fbccbced 95 SUPERFAMILY SSF47240 5 93 6.49E-25 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_4203 5c920aabd7f9730b025cb13f0b25ef52 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.098 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Thivi_4203 5c920aabd7f9730b025cb13f0b25ef52 98 Pfam PF00276 Ribosomal protein L23 8 94 1.6E-29 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Thivi_4203 5c920aabd7f9730b025cb13f0b25ef52 98 Gene3D G3DSA:3.30.70.330 1 98 1.9E-33 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Thivi_4203 5c920aabd7f9730b025cb13f0b25ef52 98 SUPERFAMILY SSF54189 2 92 1.65E-28 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Thivi_2876 81805a3c85bcc57501d2c9d75f2f94fe 173 SUPERFAMILY SSF55729 13 147 1.04E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_2876 81805a3c85bcc57501d2c9d75f2f94fe 173 Gene3D G3DSA:3.40.630.30 1 159 2.3E-41 T 13-10-2018 Thivi_3819 53a10a10693b8d5186963310a22317bf 78 Pfam PF13488 Glycine zipper 30 70 2.2E-11 T 13-10-2018 IPR039567 Glycine zipper domain Thivi_1358 105c85321234ef7a06b5a183dcd95759 98 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 12 96 1.4E-35 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Thivi_3445 68af311d8770762df15415817ce831f5 219 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 191 1.9E-26 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_4167 1580d8eea806420eef33affb21a3688a 326 Pfam PF01545 Cation efflux family 28 249 1.6E-32 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_4167 1580d8eea806420eef33affb21a3688a 326 Gene3D G3DSA:1.20.1510.10 23 249 2.1E-24 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_4167 1580d8eea806420eef33affb21a3688a 326 SUPERFAMILY SSF161111 20 250 1.7E-46 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Thivi_4167 1580d8eea806420eef33affb21a3688a 326 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 324 3.2E-62 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Thivi_0540 6d2ca6d5c33ce11200f296bd0dc2d8ce 228 Pfam PF09559 Cas6 Crispr 19 220 2.4E-65 T 13-10-2018 IPR014174 CRISPR-associated protein, Cas6-related Thivi_0540 6d2ca6d5c33ce11200f296bd0dc2d8ce 228 TIGRFAM TIGR02807 cas6_cmx6: CRISPR-associated protein Cas6, subtype MYXAN 18 218 6.6E-34 T 13-10-2018 IPR014174 CRISPR-associated protein, Cas6-related Thivi_3069 4da65ca06c9586a945eda87fdddae800 236 SUPERFAMILY SSF143081 2 222 2.88E-77 T 13-10-2018 IPR036590 SOS response associated peptidase-like Thivi_3069 4da65ca06c9586a945eda87fdddae800 236 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 2.8E-70 T 13-10-2018 IPR003738 SOS response associated peptidase (SRAP) Thivi_3069 4da65ca06c9586a945eda87fdddae800 236 Gene3D G3DSA:3.90.1680.10 1 229 2.6E-73 T 13-10-2018 IPR036590 SOS response associated peptidase-like Thivi_3412 5e57a3de98af70aa87990b6848014e75 68 Pfam PF14070 Putative motility protein 11 67 1.3E-15 T 13-10-2018 IPR025906 Putative motility protein Thivi_1077 2e27c6bddfd43fb8b778b4737da93524 191 Gene3D G3DSA:1.10.520.40 25 190 8.4E-12 T 13-10-2018 IPR038287 Cse2 superfamily Thivi_1077 2e27c6bddfd43fb8b778b4737da93524 191 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 54 184 1.0E-12 T 13-10-2018 IPR013382 CRISPR-associated protein Cse2 Thivi_0696 7021cb4351be692ca0a8611ff15bf116 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 3 456 3.2E-125 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Thivi_0696 7021cb4351be692ca0a8611ff15bf116 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 473 46.019 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 Thivi_1692 3affc0002a3709fb62666465baeac24e 204 PIRSF PIRSF006324 2 204 2.2E-48 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Thivi_1692 3affc0002a3709fb62666465baeac24e 204 Pfam PF01810 LysE type translocator 12 201 7.9E-35 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Thivi_0385 af4cebbc865cff54bb1458b390bd9d2c 150 Pfam PF10975 Protein of unknown function (DUF2802) 70 135 3.1E-19 T 13-10-2018 IPR021244 Protein of unknown function DUF2802 Thivi_0755 4ae73777edf9b31ce48486371ab38ea8 561 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 78 236 2.8E-17 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Thivi_0163 45e03f1c3a5e2fd83e10c69ebd3a68d1 185 Pfam PF01292 Prokaryotic cytochrome b561 9 179 1.5E-28 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_0163 45e03f1c3a5e2fd83e10c69ebd3a68d1 185 SUPERFAMILY SSF81342 4 181 3.3E-38 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_1852 9c9957b86980e8f02435fa7572653980 332 SUPERFAMILY SSF52540 77 289 6.69E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1852 9c9957b86980e8f02435fa7572653980 332 Gene3D G3DSA:3.40.50.300 111 317 1.6E-72 T 13-10-2018 Thivi_1852 9c9957b86980e8f02435fa7572653980 332 Pfam PF02562 PhoH-like protein 114 317 3.0E-93 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 Thivi_1859 64c1d8f06f63d5e17c42cb4604f1ec10 259 PRINTS PR01805 VacJ lipoprotein signature 101 118 7.6E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Thivi_1859 64c1d8f06f63d5e17c42cb4604f1ec10 259 PRINTS PR01805 VacJ lipoprotein signature 50 66 7.6E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Thivi_1859 64c1d8f06f63d5e17c42cb4604f1ec10 259 PRINTS PR01805 VacJ lipoprotein signature 137 154 7.6E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Thivi_1859 64c1d8f06f63d5e17c42cb4604f1ec10 259 PRINTS PR01805 VacJ lipoprotein signature 33 46 7.6E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Thivi_1859 64c1d8f06f63d5e17c42cb4604f1ec10 259 Pfam PF04333 MlaA lipoprotein 32 222 1.4E-76 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Thivi_3885 986fb973f1341fec756ea8372571feb1 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 111 1.9E-18 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Thivi_3885 986fb973f1341fec756ea8372571feb1 117 Gene3D G3DSA:2.30.30.110 4 113 9.5E-29 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thivi_3885 986fb973f1341fec756ea8372571feb1 117 SUPERFAMILY SSF50118 2 112 6.32E-22 T 13-10-2018 Thivi_0025 0f6d54129b048e26ebba0710c7da26ee 123 Gene3D G3DSA:2.40.10.220 9 123 9.3E-45 T 13-10-2018 Thivi_0025 0f6d54129b048e26ebba0710c7da26ee 123 Pfam PF07238 PilZ domain 23 111 6.7E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_2728 1a3a5681e961019be7917d383afeebed 350 Pfam PF13413 Helix-turn-helix domain 24 84 3.5E-22 T 13-10-2018 Thivi_2728 1a3a5681e961019be7917d383afeebed 350 Gene3D G3DSA:1.10.260.40 11 116 4.4E-25 T 13-10-2018 Thivi_2728 1a3a5681e961019be7917d383afeebed 350 Pfam PF13464 Domain of unknown function (DUF4115) 271 344 1.4E-22 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 Thivi_3039 0b480138e3a248a08422772da2fc5d46 362 SMART SM00052 106 347 1.0E-43 T 13-10-2018 IPR001633 EAL domain Thivi_3039 0b480138e3a248a08422772da2fc5d46 362 Pfam PF00563 EAL domain 110 342 2.5E-54 T 13-10-2018 IPR001633 EAL domain Thivi_3039 0b480138e3a248a08422772da2fc5d46 362 Gene3D G3DSA:3.20.20.450 109 352 2.8E-64 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_3039 0b480138e3a248a08422772da2fc5d46 362 SUPERFAMILY SSF141868 110 353 1.15E-68 T 13-10-2018 IPR035919 EAL domain superfamily Thivi_2519 71ac27490d76177ec2d5d9442d22b5db 513 SUPERFAMILY SSF56935 143 483 3.3E-11 T 13-10-2018 Thivi_2519 71ac27490d76177ec2d5d9442d22b5db 513 Gene3D G3DSA:2.40.160.10 133 503 4.9E-12 T 13-10-2018 IPR023614 Porin domain superfamily Thivi_2403 0e81d0b96e87d048fa42dd653ac18bff 153 TIGRFAM TIGR03054 photo_alph_chp1: putative photosynthetic complex assembly protein 12 145 6.4E-33 T 13-10-2018 IPR017495 Putative photosynthetic complex assembly protein Thivi_4471 9b8e5fe2c2fdd8cea1612ea8a4f51939 118 SUPERFAMILY SSF46626 21 117 3.85E-28 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_4471 9b8e5fe2c2fdd8cea1612ea8a4f51939 118 Pfam PF09086 Domain of unknown function (DUF1924) 23 115 7.9E-39 T 13-10-2018 IPR015170 Protein of unknown function DUF1924 Thivi_4471 9b8e5fe2c2fdd8cea1612ea8a4f51939 118 Gene3D G3DSA:1.10.760.10 6 118 1.5E-41 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_0207 ad19e63526a359a48b0a96b2d0ed661d 141 Pfam PF14261 Domain of unknown function (DUF4351) 80 132 1.1E-6 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 Thivi_0873 8f7ce557976181f88400fbd013fc1f0b 604 Pfam PF13584 Oxygen tolerance 19 504 1.6E-109 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD Thivi_2810 e6dac6b33a62d940146c15e7a013379a 77 Gene3D G3DSA:2.10.260.10 5 75 7.0E-14 T 13-10-2018 Thivi_2810 e6dac6b33a62d940146c15e7a013379a 77 SUPERFAMILY SSF89447 7 69 3.35E-11 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily Thivi_2810 e6dac6b33a62d940146c15e7a013379a 77 SMART SM00966 10 50 2.8E-4 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_2810 e6dac6b33a62d940146c15e7a013379a 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 54 6.4E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Thivi_3614 6c875d5631b46853ddbde0e5692ad61c 508 Pfam PF00795 Carbon-nitrogen hydrolase 225 467 4.3E-37 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Thivi_3614 6c875d5631b46853ddbde0e5692ad61c 508 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 449 1.3E-98 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Thivi_3614 6c875d5631b46853ddbde0e5692ad61c 508 SUPERFAMILY SSF56317 221 476 3.14E-41 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_3614 6c875d5631b46853ddbde0e5692ad61c 508 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 486 22.559 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Thivi_3614 6c875d5631b46853ddbde0e5692ad61c 508 Gene3D G3DSA:3.60.110.10 223 472 1.4E-19 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Thivi_2169 c36b4528772c7ef2212ce301d257d72a 192 Pfam PF02342 TerD domain 1 186 5.9E-85 T 13-10-2018 IPR003325 TerD domain Thivi_2169 c36b4528772c7ef2212ce301d257d72a 192 Gene3D G3DSA:2.60.60.30 19 186 1.4E-73 T 13-10-2018 Thivi_2682 e35624336b8f9e614d8c0f42fc001465 322 SUPERFAMILY SSF53335 157 301 5.27E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_2682 e35624336b8f9e614d8c0f42fc001465 322 Gene3D G3DSA:3.40.50.150 141 309 8.1E-19 T 13-10-2018 Thivi_2682 e35624336b8f9e614d8c0f42fc001465 322 Pfam PF08241 Methyltransferase domain 157 234 6.9E-14 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Thivi_1608 9c123a83c64fd28734c6e2ce1f82a0d6 88 Pfam PF13711 Domain of unknown function (DUF4160) 9 71 4.0E-22 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_2668 2eb31882516b2d44086889201143a553 156 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 138 5.6E-12 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase Thivi_2668 2eb31882516b2d44086889201143a553 156 SUPERFAMILY SSF55961 1 143 1.06E-15 T 13-10-2018 Thivi_2668 2eb31882516b2d44086889201143a553 156 Gene3D G3DSA:3.30.530.20 1 149 3.2E-19 T 13-10-2018 IPR023393 START-like domain superfamily Thivi_2673 f9216bb350a184d60629c86c2349d890 558 Gene3D G3DSA:2.60.120.380 233 378 2.5E-7 T 13-10-2018 Thivi_2673 f9216bb350a184d60629c86c2349d890 558 Gene3D G3DSA:2.60.120.380 91 219 3.7E-15 T 13-10-2018 Thivi_2616 0449a0a30bb857357f6d814bd51d758f 253 SUPERFAMILY SSF50969 28 249 1.33E-14 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Thivi_2616 0449a0a30bb857357f6d814bd51d758f 253 Pfam PF05096 Glutamine cyclotransferase 19 250 1.2E-92 T 13-10-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 MetaCyc: PWY-7942 Thivi_3805 e2ffefc8f136a1fc43e5cd4649824610 209 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 7.5E-34 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0211 26adb794dc8b5ba1f65a2e45219e5ff6 160 Gene3D G3DSA:1.20.1220.20 2 157 8.1E-29 T 13-10-2018 Thivi_0211 26adb794dc8b5ba1f65a2e45219e5ff6 160 Pfam PF01724 Domain of unknown function DUF29 7 152 1.6E-49 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_3971 a61163f84bb7d5d1242d4f501778b14c 62 Gene3D G3DSA:3.30.920.30 1 60 1.1E-24 T 13-10-2018 IPR038570 HicA superfamily Thivi_3971 a61163f84bb7d5d1242d4f501778b14c 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 60 3.3E-22 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Thivi_3971 a61163f84bb7d5d1242d4f501778b14c 62 SUPERFAMILY SSF54786 2 61 2.94E-17 T 13-10-2018 Thivi_2030 f63b39448dc11283db5ceea05131a7d8 167 Pfam PF09820 Predicted AAA-ATPase 21 115 8.3E-15 T 13-10-2018 IPR018631 AAA-ATPase-like domain Thivi_1864 7c80b53a4f9de228b2f84dd9b3b63e67 430 Pfam PF13416 Bacterial extracellular solute-binding protein 166 347 1.6E-12 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein Thivi_1864 7c80b53a4f9de228b2f84dd9b3b63e67 430 Gene3D G3DSA:3.40.190.10 176 340 1.5E-21 T 13-10-2018 Thivi_1864 7c80b53a4f9de228b2f84dd9b3b63e67 430 SUPERFAMILY SSF53850 45 376 1.43E-44 T 13-10-2018 Thivi_1398 5ffccf4acb45116eeb5eb8bd8ae86464 125 Pfam PF13396 Phospholipase_D-nuclease N-terminal 19 64 4.4E-6 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal Thivi_1260 3107463dc013356bc09628ea484bd21f 331 SUPERFAMILY SSF53850 74 299 1.98E-19 T 13-10-2018 Thivi_1260 3107463dc013356bc09628ea484bd21f 331 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 72 316 2.0E-46 T 13-10-2018 Thivi_1260 3107463dc013356bc09628ea484bd21f 331 Gene3D G3DSA:3.40.190.10 71 297 6.1E-28 T 13-10-2018 Thivi_1260 3107463dc013356bc09628ea484bd21f 331 Gene3D G3DSA:3.40.190.10 152 265 6.1E-28 T 13-10-2018 Thivi_3159 5db7b26326e130585f445be58a339ca6 284 SUPERFAMILY SSF53474 69 240 6.4E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3159 5db7b26326e130585f445be58a339ca6 284 Gene3D G3DSA:3.40.50.1820 60 278 3.8E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3695 aab4a2fad1db92e9114a241bb75e8dbe 200 SUPERFAMILY SSF53335 25 180 5.68E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Thivi_3695 aab4a2fad1db92e9114a241bb75e8dbe 200 Gene3D G3DSA:3.40.50.150 11 199 2.5E-42 T 13-10-2018 Thivi_3695 aab4a2fad1db92e9114a241bb75e8dbe 200 Pfam PF05175 Methyltransferase small domain 25 190 3.4E-34 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Thivi_2866 1588a23c6c997f1e849dce58d4b9ace1 195 Pfam PF11356 Type II secretion system protein C 51 159 6.6E-7 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal Thivi_0697 90177e1d06cca020c1a5dc55e4cd1a8f 317 Pfam PF05661 Protein of unknown function (DUF808) 3 300 9.8E-114 T 13-10-2018 IPR008526 Inner membrane protein YedI Thivi_0697 90177e1d06cca020c1a5dc55e4cd1a8f 317 PIRSF PIRSF016660 1 314 1.6E-115 T 13-10-2018 IPR008526 Inner membrane protein YedI Thivi_4281 05c485891f390a0cb9da11e7b507eece 378 Pfam PF14907 Uncharacterised nucleotidyltransferase 27 284 2.2E-56 T 13-10-2018 IPR039498 Uncharacterised nucleotidyltransferase Thivi_1693 c4baa107fb12210cc68f27d860fd2a41 91 SUPERFAMILY SSF47413 29 90 2.88E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Thivi_1693 c4baa107fb12210cc68f27d860fd2a41 91 Pfam PF01381 Helix-turn-helix 37 86 6.9E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Thivi_1693 c4baa107fb12210cc68f27d860fd2a41 91 Gene3D G3DSA:1.10.260.40 16 91 2.2E-8 T 13-10-2018 Thivi_2088 ac69445542a2ce098a00969886e639c5 96 SUPERFAMILY SSF47598 7 81 6.35E-19 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_2088 ac69445542a2ce098a00969886e639c5 96 Pfam PF08681 Protein of unknown function (DUF1778) 10 86 3.1E-21 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Thivi_2088 ac69445542a2ce098a00969886e639c5 96 Gene3D G3DSA:1.20.5.780 5 86 6.7E-16 T 13-10-2018 Thivi_0459 3c65857174e232a2aae5052bd6b97dcf 365 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 3 323 2.2E-103 T 13-10-2018 IPR010148 CRISPR-associated protein, CT1975 Thivi_0459 3c65857174e232a2aae5052bd6b97dcf 365 Pfam PF09344 CT1975-like protein 5 328 4.5E-101 T 13-10-2018 IPR010148 CRISPR-associated protein, CT1975 Thivi_0933 4bcc17c48a9fb1f4c01eeccc5227fcf1 155 Gene3D G3DSA:3.30.1450.10 40 122 2.3E-27 T 13-10-2018 IPR037873 BamE-like Thivi_0933 4bcc17c48a9fb1f4c01eeccc5227fcf1 155 Pfam PF04355 SmpA / OmlA family 41 109 5.2E-23 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Thivi_0933 4bcc17c48a9fb1f4c01eeccc5227fcf1 155 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 18 126 23.971 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE Thivi_0736 c191d0cfe74f2d490e1236831166bece 65 Gene3D G3DSA:2.60.260.40 8 63 4.5E-11 T 13-10-2018 Thivi_0736 c191d0cfe74f2d490e1236831166bece 65 Pfam PF10276 Zinc-finger domain 36 61 6.2E-8 T 13-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Thivi_0225 1dcf58e852b79c053fbfb3123877e835 170 Pfam PF01864 CDP-archaeol synthase 91 152 1.6E-11 T 13-10-2018 IPR032690 CDP-archaeol synthase KEGG: 00564+2.7.7.67|MetaCyc: PWY-6349 Thivi_2911 1d9b310df4e6dfb72802d709f9d1b8e9 240 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 62 201 2.0E-29 T 13-10-2018 Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 SUPERFAMILY SSF50985 47 319 1.22E-49 T 13-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Gene3D G3DSA:2.130.10.30 103 325 3.5E-63 T 13-10-2018 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 267 295 2.0E-7 T 13-10-2018 Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 108 137 4.7E-9 T 13-10-2018 Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 148 177 2.0E-9 T 13-10-2018 Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 188 216 2.6E-7 T 13-10-2018 Thivi_3545 f5074e9377910eaa67aee6e8167c1fc0 326 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 228 256 3.1E-7 T 13-10-2018 Thivi_2779 a166d20b782358d7cdefa4465f14ae3c 220 Gene3D G3DSA:2.40.10.220 102 206 1.5E-6 T 13-10-2018 Thivi_2779 a166d20b782358d7cdefa4465f14ae3c 220 Pfam PF07238 PilZ domain 114 201 2.9E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 Thivi_1292 eca8848a645643b9294fe143ae53fae8 499 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 405 496 3.1E-26 T 13-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Thivi_1458 16eb2e57909fa1d798f0e425686f5a42 614 SUPERFAMILY SSF53271 17 76 3.8E-5 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like Thivi_1675 04bc03fddd2bfab8c6fc4cfce8c3f1d9 320 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 79.315 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_1675 04bc03fddd2bfab8c6fc4cfce8c3f1d9 320 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 260 1.0E-59 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_1675 04bc03fddd2bfab8c6fc4cfce8c3f1d9 320 Pfam PF03186 CobD/Cbib protein 9 296 4.9E-83 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Thivi_0703 6b84405903feea51778f6b725097dbc7 62 Pfam PF11127 Protein of unknown function (DUF2892) 3 61 1.1E-16 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Thivi_1927 f4853051c77cd8976472b116ef1e0688 764 Pfam PF07793 Protein of unknown function (DUF1631) 22 758 6.1E-201 T 13-10-2018 IPR012434 Protein of unknown function DUF1631 Thivi_1439 46f1248661f18ac123bf4b97d401c4fd 126 SUPERFAMILY SSF47226 55 115 8.9E-5 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 Thivi_3401 2fa3d3cdc20b8adf5f476aa7fcc6f950 140 Pfam PF01844 HNH endonuclease 51 99 5.4E-11 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Thivi_3401 2fa3d3cdc20b8adf5f476aa7fcc6f950 140 SMART SM00507 39 94 0.0027 T 13-10-2018 IPR003615 HNH nuclease Thivi_0252 8d900148e0cba8b1ae60d16e063c35ba 261 Pfam PF06966 Protein of unknown function (DUF1295) 22 247 4.2E-73 T 13-10-2018 IPR010721 Protein of unknown function DUF1295 Thivi_0252 8d900148e0cba8b1ae60d16e063c35ba 261 Gene3D G3DSA:1.20.120.1630 60 253 3.9E-11 T 13-10-2018 Thivi_1671 4a3d7a2504a6c9fedd866e128371cd11 197 Gene3D G3DSA:3.40.50.1240 6 185 2.1E-44 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_1671 4a3d7a2504a6c9fedd866e128371cd11 197 SUPERFAMILY SSF53254 5 184 1.03E-43 T 13-10-2018 IPR029033 Histidine phosphatase superfamily Thivi_1671 4a3d7a2504a6c9fedd866e128371cd11 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 185 2.1E-39 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_1671 4a3d7a2504a6c9fedd866e128371cd11 197 SMART SM00855 5 151 4.4E-14 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Thivi_4428 846b70c69dda11c37ac45bf2d74fcfbb 322 Gene3D G3DSA:3.90.1690.10 1 320 8.6E-88 T 13-10-2018 Thivi_1371 dd4da66262aefdf6e27df0f7a5b354bc 484 Pfam PF02447 GntP family permease 3 162 1.0E-10 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Thivi_3080 5c9a6e132693f0394d98a3abe368f4a0 170 Gene3D G3DSA:1.20.120.1550 11 168 1.7E-20 T 13-10-2018 Thivi_3080 5c9a6e132693f0394d98a3abe368f4a0 170 Pfam PF16702 Domain of unknown function (DUF5063) 8 164 1.1E-42 T 13-10-2018 IPR032025 Protein of unknown function DUF5063 Thivi_2040 7673a886e783694b5c235365b82b4cb9 101 Pfam PF01934 Protein of unknown function DUF86 13 88 3.3E-16 T 13-10-2018 IPR008201 Protein of unknown function DUF86 Thivi_3754 dcc52051aacba263032e29b2fca0192c 294 Pfam PF13289 SIR2-like domain 146 264 7.5E-11 T 13-10-2018 IPR039444 SIR2-like domain Thivi_1141 c9098a138a7b898164b1aa566d4c578d 193 Pfam PF07603 Protein of unknown function (DUF1566) 54 177 2.4E-29 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 Thivi_3861 f5eddac0c5d6b000bc4b815a0884ec1f 163 Pfam PF14358 Domain of unknown function (DUF4405) 10 59 4.9E-7 T 13-10-2018 IPR025517 Domain of unknown function DUF4405 Thivi_2958 cc4c8b8ac5467eb3c1eb79450a8f39ad 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 4.9E-22 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Thivi_2958 cc4c8b8ac5467eb3c1eb79450a8f39ad 89 PIRSF PIRSF028784 1 89 1.4E-27 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Thivi_3836 09c8ff758d1a73c33ae28620b842bb94 96 Hamap MF_02117 N(2)-fixation sustaining protein CowN [cowN]. 5 96 21.044 T 13-10-2018 IPR024899 Nitrogen fixation-sustaining protein CowN GO:0009399 Thivi_2676 370c432cd984494a025b74d73be34e1a 322 Pfam PF07277 SapC 67 281 5.1E-62 T 13-10-2018 IPR010836 SapC Thivi_0501 ee4415e033540dd304b57064e65a60b3 139 Pfam PF02915 Rubrerythrin 12 133 4.0E-27 T 13-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Thivi_0501 ee4415e033540dd304b57064e65a60b3 139 SUPERFAMILY SSF47240 3 138 5.48E-42 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_0501 ee4415e033540dd304b57064e65a60b3 139 Gene3D G3DSA:1.20.1260.10 1 138 1.0E-53 T 13-10-2018 IPR012347 Ferritin-like Thivi_2346 b6336c38de5e35916c78c47d8110a952 159 Pfam PF05685 Putative restriction endonuclease 25 127 8.2E-11 T 13-10-2018 IPR008538 Domain of unknown function DUF820 Thivi_2346 b6336c38de5e35916c78c47d8110a952 159 SUPERFAMILY SSF52980 18 128 8.04E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Thivi_2346 b6336c38de5e35916c78c47d8110a952 159 Gene3D G3DSA:3.90.1570.10 14 130 8.9E-15 T 13-10-2018 Thivi_2125 6f191fa297e35987cfeeb1d8e33b4664 288 SUPERFAMILY SSF48179 177 282 1.59E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Thivi_2125 6f191fa297e35987cfeeb1d8e33b4664 288 Gene3D G3DSA:3.40.50.720 2 181 9.9E-58 T 13-10-2018 Thivi_2125 6f191fa297e35987cfeeb1d8e33b4664 288 Pfam PF02153 Prephenate dehydrogenase 17 274 1.1E-73 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Thivi_2125 6f191fa297e35987cfeeb1d8e33b4664 288 Gene3D G3DSA:1.10.3660.10 182 288 1.7E-35 T 13-10-2018 Thivi_2125 6f191fa297e35987cfeeb1d8e33b4664 288 SUPERFAMILY SSF51735 4 172 5.42E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_1602 3ed9bd45d13d6419709f12f95ebe618f 234 Pfam PF08900 Domain of unknown function (DUF1845) 35 220 3.7E-6 T 13-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 Thivi_1696 9e1826129667793873d880e8a5f6ff9a 196 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 9 185 31.8 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Thivi_1696 9e1826129667793873d880e8a5f6ff9a 196 Pfam PF02677 Uncharacterized BCR, COG1636 9 183 7.1E-62 T 13-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Thivi_4339 818e3055c51ab84b500343233b2f63ed 224 Pfam PF14103 Domain of unknown function (DUF4276) 8 220 1.4E-49 T 13-10-2018 IPR025455 Protein of unknown function DUF4276 Thivi_2613 90cf00ca86882415aeca741db1ae94e4 238 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 213 237 1.6E-6 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_2613 90cf00ca86882415aeca741db1ae94e4 238 Pfam PF07589 PEP-CTERM motif 213 235 9.7E-7 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_3081 3ab6e71470bb8ffc800c291b04256540 122 Gene3D G3DSA:2.60.300.12 9 117 1.4E-20 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3081 3ab6e71470bb8ffc800c291b04256540 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 10 115 2.0E-22 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Thivi_3081 3ab6e71470bb8ffc800c291b04256540 122 SUPERFAMILY SSF89360 5 101 8.63E-21 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3081 3ab6e71470bb8ffc800c291b04256540 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 92 1.2E-11 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Thivi_1399 123867a6706bda991d5837bcc5d0a49c 364 Pfam PF01594 AI-2E family transporter 15 327 1.1E-51 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Thivi_0013 2b9ef37aa7f265aef54a670781b4f5f3 192 Pfam PF02620 Uncharacterized ACR, COG1399 66 186 3.0E-16 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Thivi_1541 0e8356893482871616761ec8575174f6 236 Pfam PF01863 Protein of unknown function DUF45 21 230 6.3E-49 T 13-10-2018 IPR002725 Protein of unknown function DUF45 Thivi_1541 0e8356893482871616761ec8575174f6 236 Gene3D G3DSA:3.30.2010.10 137 229 4.6E-13 T 13-10-2018 Thivi_3670 fb0b4f9e3c5bc3bc64d0d8751a097e68 267 SUPERFAMILY SSF89392 51 247 2.98E-9 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Thivi_3670 fb0b4f9e3c5bc3bc64d0d8751a097e68 267 Pfam PF09865 Predicted periplasmic protein (DUF2092) 48 257 4.4E-76 T 13-10-2018 IPR019207 Protein of unknown function DUF2092, periplasmic Thivi_2886 19511c176b5d44ba5f5685f3bd3ce8c5 225 SUPERFAMILY SSF140864 17 97 2.48E-12 T 13-10-2018 IPR037214 TROVE domain superfamily Thivi_0343 906f8dab0c3fce1500c89c6df407b567 69 Pfam PF14070 Putative motility protein 9 68 2.1E-12 T 13-10-2018 IPR025906 Putative motility protein Thivi_0161 25bd5074a016d9f9428cc5ebacd83090 231 Pfam PF13091 PLD-like domain 15 130 7.4E-8 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Thivi_0161 25bd5074a016d9f9428cc5ebacd83090 231 Gene3D G3DSA:3.30.870.10 2 137 1.8E-8 T 13-10-2018 Thivi_0161 25bd5074a016d9f9428cc5ebacd83090 231 SUPERFAMILY SSF56024 10 130 1.84E-9 T 13-10-2018 Thivi_2140 cb2fff1b6aba95ada4307d8a02f4cad1 194 Pfam PF13681 Type IV pilus assembly protein PilX C-term 101 192 3.9E-14 T 13-10-2018 IPR025205 PilX/PilW C-terminal domain Thivi_2140 cb2fff1b6aba95ada4307d8a02f4cad1 194 Pfam PF14341 PilX N-terminal 12 60 1.8E-14 T 13-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain Thivi_3635 32645459ce97de19f055745d05cb3d80 119 Gene3D G3DSA:1.10.10.60 74 116 9.2E-7 T 13-10-2018 Thivi_3635 32645459ce97de19f055745d05cb3d80 119 Pfam PF13384 Homeodomain-like domain 84 116 4.6E-6 T 13-10-2018 Thivi_0458 2740c253492c0376a2fbe14e78d9b91d 191 Gene3D G3DSA:1.10.520.40 22 188 5.8E-35 T 13-10-2018 IPR038287 Cse2 superfamily Thivi_0458 2740c253492c0376a2fbe14e78d9b91d 191 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 43 184 2.2E-14 T 13-10-2018 IPR013382 CRISPR-associated protein Cse2 Thivi_0458 2740c253492c0376a2fbe14e78d9b91d 191 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 32 185 4.6E-16 T 13-10-2018 IPR013382 CRISPR-associated protein Cse2 Thivi_1946 d008ed888e75920f0c091cea39522daf 84 Pfam PF13711 Domain of unknown function (DUF4160) 4 69 7.7E-24 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_3881 21f9360daf2e13a4d5ecba997a1280f2 424 Pfam PF02342 TerD domain 4 163 8.7E-29 T 13-10-2018 IPR003325 TerD domain Thivi_3881 21f9360daf2e13a4d5ecba997a1280f2 424 Gene3D G3DSA:2.60.60.30 15 162 8.5E-31 T 13-10-2018 Thivi_1643 3f839ecbbcedc254e1db230209210852 239 Pfam PF09582 Iron only nitrogenase protein AnfO (AnfO_nitrog) 2 184 6.9E-41 T 13-10-2018 IPR014287 Nitrogenase iron-iron, accessory protein AnfO Thivi_1377 5edcdfcb5afb82ada12c0719b7f62972 126 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 100 7.6E-16 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Thivi_1573 a47914d69d333ed60524e81787d27e94 471 Gene3D G3DSA:1.10.3290.10 113 366 1.8E-50 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_1573 a47914d69d333ed60524e81787d27e94 471 Pfam PF02661 Fic/DOC family 185 292 6.6E-21 T 13-10-2018 IPR003812 Fido domain Thivi_1573 a47914d69d333ed60524e81787d27e94 471 SUPERFAMILY SSF140931 165 355 3.66E-29 T 13-10-2018 IPR036597 Fido-like domain superfamily Thivi_3979 c54d0ed47e6cef8d1eef2a3f0acd58cc 156 Pfam PF11154 Protein of unknown function (DUF2934) 108 144 4.3E-6 T 13-10-2018 IPR021327 Protein of unknown function DUF2934 Thivi_3868 135023aaa5b974432f2a9ea77349a9ff 78 Pfam PF13436 Glycine-zipper domain 29 69 5.6E-11 T 13-10-2018 IPR025693 Glycine-zipper-containing OmpA-like membrane domain Thivi_1411 4502b19165b9934e04a9053983816a21 625 Gene3D G3DSA:3.10.20.310 211 288 5.9E-8 T 13-10-2018 Thivi_1411 4502b19165b9934e04a9053983816a21 625 Gene3D G3DSA:2.40.160.50 290 625 1.3E-69 T 13-10-2018 Thivi_1411 4502b19165b9934e04a9053983816a21 625 Pfam PF01103 Surface antigen 315 625 4.4E-42 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Thivi_1394 1a649327b97cdf7f682525cac7f87cb9 545 Pfam PF03606 C4-dicarboxylate anaerobic carrier 31 539 2.9E-91 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Thivi_4105 a28047cd0cfbe53fb26dcb479b364615 158 Pfam PF01724 Domain of unknown function DUF29 4 145 2.6E-45 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_4105 a28047cd0cfbe53fb26dcb479b364615 158 Gene3D G3DSA:1.20.1220.20 1 153 5.7E-32 T 13-10-2018 Thivi_4274 38ce0eb6fdb61684631b9ed06e558ffb 247 Gene3D G3DSA:3.40.630.30 13 222 4.1E-45 T 13-10-2018 Thivi_4274 38ce0eb6fdb61684631b9ed06e558ffb 247 SUPERFAMILY SSF55729 8 207 3.15E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase Thivi_4274 38ce0eb6fdb61684631b9ed06e558ffb 247 Pfam PF13444 Acetyltransferase (GNAT) domain 26 128 1.4E-15 T 13-10-2018 Thivi_4274 38ce0eb6fdb61684631b9ed06e558ffb 247 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 3 235 3.3E-65 T 13-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted Thivi_4585 d9040c7899941530e326208ad786c771 305 PIRSF PIRSF026649 2 297 3.7E-89 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Thivi_4585 d9040c7899941530e326208ad786c771 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 288 2.1E-62 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Thivi_1485 7fc386e404466545858773f92d6de596 354 Pfam PF11348 Protein of unknown function (DUF3150) 15 266 6.3E-90 T 13-10-2018 IPR021496 Protein of unknown function DUF3150 Thivi_1503 99f5b1684321a842d3e97844b151ca39 114 SUPERFAMILY SSF50118 1 110 4.36E-6 T 13-10-2018 Thivi_2968 1a3b5c422d96d52e13822738fb8c8f66 193 Pfam PF01947 Protein of unknown function (DUF98) 49 191 1.9E-9 T 13-10-2018 IPR002800 Chorismate pyruvate-lyase Rv2949c-like Thivi_2968 1a3b5c422d96d52e13822738fb8c8f66 193 Gene3D G3DSA:3.40.1410.10 40 193 2.0E-38 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Thivi_2968 1a3b5c422d96d52e13822738fb8c8f66 193 SUPERFAMILY SSF64288 41 192 6.9E-33 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Thivi_1376 fefb8c209d0232cf85f2e8659898d330 325 Pfam PF13244 Domain of unknown function (DUF4040) 19 83 2.9E-14 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 Thivi_1376 fefb8c209d0232cf85f2e8659898d330 325 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 197 307 2.4E-13 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thivi_2133 1466d385d05abedc9f0d02ef00e5385a 194 Pfam PF04891 NifQ 32 191 6.1E-58 T 13-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 Thivi_0733 7a32b99d96c5e673644b5f6b7b3c8a28 261 Pfam PF09955 Predicted integral membrane protein (DUF2189) 70 194 9.5E-34 T 13-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Thivi_0788 ba6a311b3f20accc2efe35945797dcb1 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 15 104 2.0E-28 T 13-10-2018 IPR009241 Toxin HigB-like Thivi_1223 c50baf1d5b85ba8a0c896965550cfd28 167 SUPERFAMILY SSF50341 17 155 1.14E-38 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Thivi_1223 c50baf1d5b85ba8a0c896965550cfd28 167 SMART SM00260 14 151 1.6E-43 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1223 c50baf1d5b85ba8a0c896965550cfd28 167 Gene3D G3DSA:2.30.30.40 20 145 5.9E-41 T 13-10-2018 Thivi_1223 c50baf1d5b85ba8a0c896965550cfd28 167 Pfam PF01584 CheW-like domain 18 153 1.7E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Thivi_1223 c50baf1d5b85ba8a0c896965550cfd28 167 Gene3D G3DSA:2.40.50.180 37 146 5.9E-41 T 13-10-2018 Thivi_0030 e8a34278930335717b1457af812c2354 104 SUPERFAMILY SSF89360 1 94 9.81E-14 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_0030 e8a34278930335717b1457af812c2354 104 Gene3D G3DSA:2.60.300.12 1 102 7.1E-41 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Thivi_3163 b446984bf5b25d13852e368b494c93f1 153 Pfam PF01814 Hemerythrin HHE cation binding domain 5 136 7.0E-9 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Thivi_3163 b446984bf5b25d13852e368b494c93f1 153 Gene3D G3DSA:1.20.120.520 3 148 2.3E-5 T 13-10-2018 Thivi_1734 b8ad8a0a835d9a99d9013a0476582008 120 Gene3D G3DSA:3.30.2020.30 1 96 1.4E-28 T 13-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 Thivi_1734 b8ad8a0a835d9a99d9013a0476582008 120 Pfam PF06155 Protein of unknown function (DUF971) 8 91 1.7E-30 T 13-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 Thivi_2432 8ad0a9f586898e3c78c80ee5aaa14323 620 SUPERFAMILY SSF48452 467 609 1.33E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2432 8ad0a9f586898e3c78c80ee5aaa14323 620 Gene3D G3DSA:1.25.40.10 326 618 1.1E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Thivi_2066 3fb51d802baf441272c822d8a6b573fe 305 Pfam PF01882 Protein of unknown function DUF58 44 128 9.3E-22 T 13-10-2018 IPR002881 Domain of unknown function DUF58 Thivi_4404 133deb72b9db829258a754cd2f28bf6c 151 SUPERFAMILY SSF46689 63 135 1.68E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Thivi_4404 133deb72b9db829258a754cd2f28bf6c 151 Pfam PF08765 Mor transcription activator family 65 140 8.3E-14 T 13-10-2018 IPR014875 Mor transcription activator Thivi_0213 bacbf563b9d52c546912e230ebba7b7e 173 Pfam PF14316 Domain of unknown function (DUF4381) 8 161 1.9E-44 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 Thivi_3668 12f34dfea8efc68e116ad688266a8d48 397 Pfam PF01734 Patatin-like phospholipase 88 271 5.0E-16 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Thivi_3668 12f34dfea8efc68e116ad688266a8d48 397 Gene3D G3DSA:3.40.1090.10 65 182 3.4E-10 T 13-10-2018 Thivi_3668 12f34dfea8efc68e116ad688266a8d48 397 SUPERFAMILY SSF52151 84 387 1.07E-27 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thivi_1860 359b51b462e58285534f6ad39268f391 301 Pfam PF01963 TraB family 51 297 2.3E-53 T 13-10-2018 IPR002816 Pheromone shutdown, TraB Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 73 1.1E-26 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.4E-21 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 4.6E-36 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 4.6E-36 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 4.6E-36 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_3910 da7ef8efe6338f7fad831e07d6508ab7 172 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 4.6E-36 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Thivi_2439 2f67429624ca7a2c251e53a5b6a1b538 298 Pfam PF16537 Type II secretion system protein B 245 296 7.6E-14 T 13-10-2018 IPR032389 Type II secretion system protein B Thivi_1589 4e8ca129857b390a6346ea067dd1cbbc 136 Pfam PF11275 Protein of unknown function (DUF3077) 6 47 9.5E-6 T 13-10-2018 IPR021427 Protein of unknown function DUF3077 Thivi_2614 2b3a033e0e1e5f64a39d27e02108586e 303 Pfam PF03692 Putative zinc- or iron-chelating domain 29 143 2.3E-11 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Thivi_4255 1b75acebe94e36fbb11bae05c8b74617 484 TIGRFAM TIGR03016 pepcterm_hypo_1: uncharacterized protein, PEP-CTERM system associated 32 481 7.0E-72 T 13-10-2018 IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM Thivi_3284 b69fbcff8d0955c3aa951f06e09e78dc 220 SUPERFAMILY SSF88697 16 205 4.72E-43 T 13-10-2018 IPR015947 PUA-like superfamily Thivi_3284 b69fbcff8d0955c3aa951f06e09e78dc 220 SMART SM00464 16 210 1.4E-9 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_3284 b69fbcff8d0955c3aa951f06e09e78dc 220 Gene3D G3DSA:2.30.130.40 9 122 2.8E-27 T 13-10-2018 Thivi_3284 b69fbcff8d0955c3aa951f06e09e78dc 220 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 205 3.4E-24 T 13-10-2018 IPR003111 Lon, substrate-binding domain Thivi_1316 63a41cb0b08160896aba84422c8d1bfb 183 Pfam PF13689 Domain of unknown function (DUF4154) 35 177 2.0E-44 T 13-10-2018 IPR025293 YfiR-like Thivi_4042 1e59335052b3746873369685e2ff512a 640 SUPERFAMILY SSF48239 239 315 1.49E-6 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Thivi_1244 700c6b36e67e54f8e8fa49769dd0db06 268 SUPERFAMILY SSF69349 107 198 3.06E-10 T 13-10-2018 Thivi_0526 82722698434527c293961744135e7264 305 Pfam PF13460 NAD(P)H-binding 7 162 1.4E-21 T 13-10-2018 IPR016040 NAD(P)-binding domain Thivi_0526 82722698434527c293961744135e7264 305 SUPERFAMILY SSF51735 1 275 3.25E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily Thivi_0526 82722698434527c293961744135e7264 305 Gene3D G3DSA:3.40.50.720 2 294 7.4E-49 T 13-10-2018 Thivi_4293 16fa237c5acd7145fa3123bdcaadb1d9 165 Pfam PF04319 NifZ domain 3 73 1.1E-31 T 13-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 Thivi_2520 6eb361dac9f86a07d4e71a298b953078 419 SUPERFAMILY SSF56935 88 419 1.78E-15 T 13-10-2018 Thivi_3265 1b50a761f60076a7de92d77a0a4d8549 219 Pfam PF10986 Protein of unknown function (DUF2796) 41 190 6.1E-29 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 Thivi_3646 9a276365f27addaaf4a95409b84aeddf 290 Pfam PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) 31 286 8.3E-105 T 13-10-2018 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase GO:0009399|GO:0030701 Thivi_2267 1f2ba820b957c30b846e7e2a6fbc3a84 158 Pfam PF01724 Domain of unknown function DUF29 6 151 8.2E-48 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_2267 1f2ba820b957c30b846e7e2a6fbc3a84 158 Gene3D G3DSA:1.20.1220.20 2 156 1.5E-28 T 13-10-2018 Thivi_2006 503563b0af92f4f259eecda1cb73d1c3 422 SUPERFAMILY SSF53098 28 364 2.81E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2006 503563b0af92f4f259eecda1cb73d1c3 422 Pfam PF13546 DDE superfamily endonuclease 9 259 3.9E-46 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_3359 15b6bc6a3ea5d6795a61f0b53f13268d 148 Gene3D G3DSA:1.20.1220.20 1 148 4.1E-30 T 13-10-2018 Thivi_3359 15b6bc6a3ea5d6795a61f0b53f13268d 148 Pfam PF01724 Domain of unknown function DUF29 6 144 3.3E-48 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_2218 0e12891776332cff0d1620b98db68861 313 Pfam PF04228 Putative neutral zinc metallopeptidase 1 308 5.2E-121 T 13-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative Thivi_2882 fc0a9ff9e6dbbb617e18db5810cbb324 396 Gene3D G3DSA:3.40.50.300 4 208 2.0E-24 T 13-10-2018 Thivi_2882 fc0a9ff9e6dbbb617e18db5810cbb324 396 SUPERFAMILY SSF52540 4 253 1.3E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_1050 f8d893ca099725fa4dd9cd6f8325e00e 84 Pfam PF13244 Domain of unknown function (DUF4040) 12 76 1.2E-15 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 Thivi_3557 74b9dcfb98af3cf0ad105067e53dfe2f 185 Pfam PF01292 Prokaryotic cytochrome b561 9 179 5.4E-23 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Thivi_3557 74b9dcfb98af3cf0ad105067e53dfe2f 185 SUPERFAMILY SSF81342 5 180 1.33E-29 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Thivi_4229 9bc7cdb7131728c318c2bcc21dde1f1f 256 Gene3D G3DSA:1.10.3680.10 133 253 2.1E-9 T 13-10-2018 IPR029024 TerB-like Thivi_4229 9bc7cdb7131728c318c2bcc21dde1f1f 256 SUPERFAMILY SSF158682 135 250 6.67E-18 T 13-10-2018 IPR029024 TerB-like Thivi_4229 9bc7cdb7131728c318c2bcc21dde1f1f 256 Pfam PF04391 Protein of unknown function (DUF533) 69 251 7.2E-46 T 13-10-2018 IPR007486 Inner membrane protein YebE Thivi_3060 8b8fb1f6986f224e48186fbedecbe370 110 Pfam PF10387 Protein of unknown function (DUF2442) 33 101 6.2E-15 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_3060 8b8fb1f6986f224e48186fbedecbe370 110 Gene3D G3DSA:3.30.2020.20 31 96 2.0E-18 T 13-10-2018 Thivi_1844 093ee601bd0bf7d8ddf2722fd439cb1c 419 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 232 323 7.5E-6 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Thivi_1844 093ee601bd0bf7d8ddf2722fd439cb1c 419 Gene3D G3DSA:2.60.60.30 15 171 2.8E-44 T 13-10-2018 Thivi_1844 093ee601bd0bf7d8ddf2722fd439cb1c 419 Pfam PF02342 TerD domain 1 171 5.6E-47 T 13-10-2018 IPR003325 TerD domain Thivi_1067 dbce6b84a7af0ed5a7c1ca0718d535b3 182 Pfam PF03843 Outer membrane lipoprotein Slp family 21 152 3.2E-30 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Thivi_4418 13b99ebbe3e2e3fb1d43f0eae126bdc9 167 Pfam PF08822 Protein of unknown function (DUF1804) 4 163 7.9E-60 T 13-10-2018 IPR014926 Bacteriophage D3112, Orf24 Thivi_1520 fa5f97381500e46294f072a0034a70a4 704 Gene3D G3DSA:1.10.3210.40 52 275 1.8E-23 T 13-10-2018 Thivi_1520 fa5f97381500e46294f072a0034a70a4 704 Pfam PF07514 Putative helicase 51 369 5.2E-91 T 13-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative Thivi_1520 fa5f97381500e46294f072a0034a70a4 704 SMART SM00471 110 279 7.7E-4 T 13-10-2018 IPR003607 HD/PDEase domain Thivi_0382 b78328c87a8f621de270006d78cdf3fe 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 216 1.2E-24 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_0154 b0483bc02c62bba0b2e559a47adec020 317 Pfam PF01882 Protein of unknown function DUF58 208 284 1.9E-13 T 13-10-2018 IPR002881 Domain of unknown function DUF58 Thivi_1304 f42677b759e9c46ff7e72df2a476451e 472 Pfam PF13183 4Fe-4S dicluster domain 59 144 2.2E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thivi_1304 f42677b759e9c46ff7e72df2a476451e 472 SUPERFAMILY SSF46548 46 159 6.63E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1304 f42677b759e9c46ff7e72df2a476451e 472 Gene3D G3DSA:1.10.1060.10 24 164 5.4E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Thivi_1304 f42677b759e9c46ff7e72df2a476451e 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thivi_1304 f42677b759e9c46ff7e72df2a476451e 472 Pfam PF02754 Cysteine-rich domain 335 423 6.8E-12 T 13-10-2018 IPR004017 Cysteine-rich domain Thivi_3728 ce3026095cfe54b127af1e474f4c8c32 68 Pfam PF14070 Putative motility protein 11 67 4.8E-18 T 13-10-2018 IPR025906 Putative motility protein Thivi_4066 a1ce7dffd00095565f9ac1d25235e6b3 211 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 186 209 1.2E-6 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_4066 a1ce7dffd00095565f9ac1d25235e6b3 211 Pfam PF07589 PEP-CTERM motif 185 207 2.3E-8 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_0764 574bb0fee93e18fe91469fd73c9243dc 226 SUPERFAMILY SSF53098 23 184 9.86E-14 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily Thivi_2750 00eddb86ee697309dd2617627282e5e3 283 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Thivi_2750 00eddb86ee697309dd2617627282e5e3 283 Pfam PF01148 Cytidylyltransferase family 18 278 6.3E-54 T 13-10-2018 Thivi_1509 f81ff908a8bf1eb8143a4278ffc090ea 205 Pfam PF05309 TraE protein 1 176 4.4E-28 T 13-10-2018 IPR007973 Pilus assembly TraE GO:0000746 Thivi_1951 99da63a0182c9d3e8d11e38d5d1c829e 82 Gene3D G3DSA:3.30.2020.20 6 67 8.8E-14 T 13-10-2018 Thivi_1951 99da63a0182c9d3e8d11e38d5d1c829e 82 Pfam PF10387 Protein of unknown function (DUF2442) 6 71 1.3E-20 T 13-10-2018 IPR018841 Protein of unknown function DUF2442 Thivi_3537 97627c1758901074453b22d7e02813de 187 Pfam PF14301 Domain of unknown function (DUF4376) 95 187 1.3E-8 T 13-10-2018 IPR025484 Domain of unknown function DUF4376 Thivi_1847 b47c844b9f02b6f44daa1771a464f8ad 421 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 88 162 1.4E-20 T 13-10-2018 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal Thivi_1847 b47c844b9f02b6f44daa1771a464f8ad 421 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 171 316 1.7E-34 T 13-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Thivi_4627 6e56df6845d5e146e80d227b61d10ea0 131 Pfam PF11042 Protein of unknown function (DUF2750) 22 123 1.2E-32 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 Thivi_3413 97187e562b68f5924de640631c360110 180 Pfam PF07209 Protein of unknown function (DUF1415) 6 174 2.1E-69 T 13-10-2018 IPR009858 Protein of unknown function DUF1415 Thivi_1690 4d17b6694892bb38dd98ac9d5be03f00 110 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 103 1.6E-26 T 13-10-2018 IPR009241 Toxin HigB-like Thivi_4433 0c704cd841e27e105b89791d1ce37f66 163 Pfam PF07030 Protein of unknown function (DUF1320) 4 146 7.6E-12 T 13-10-2018 IPR009752 Bacteriophage Mu, Gp36 Thivi_4092 07affd252ecf2a0b661e996addcedc19 138 SUPERFAMILY SSF55874 31 126 3.68E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4092 07affd252ecf2a0b661e996addcedc19 138 Gene3D G3DSA:3.30.565.10 2 137 3.0E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Thivi_4092 07affd252ecf2a0b661e996addcedc19 138 Pfam PF13581 Histidine kinase-like ATPase domain 12 131 4.6E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Thivi_0980 e31454ed053cbb8f46d9e45bcb56119b 330 Gene3D G3DSA:3.40.50.1820 18 318 3.2E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_0980 e31454ed053cbb8f46d9e45bcb56119b 330 Pfam PF07859 alpha/beta hydrolase fold 88 294 5.5E-47 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Thivi_0980 e31454ed053cbb8f46d9e45bcb56119b 330 SUPERFAMILY SSF53474 25 316 4.69E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold Thivi_3661 0c1b3815f100bf554429661c5ba14608 355 Pfam PF01594 AI-2E family transporter 19 345 5.8E-30 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like Thivi_3333 8ecc63d7a405eacdb7f4df3c9d36f9fc 229 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 222 2.2E-51 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Thivi_4410 c27426191c0b82e5ba77fe91974b9928 216 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 21 105 6.1E-24 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family Thivi_4410 c27426191c0b82e5ba77fe91974b9928 216 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 12 110 2.0E-27 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family Thivi_3183 d4c4d1ba9fea4bd91dd5339d94e42824 230 SMART SM00900 109 211 2.1E-13 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_3183 d4c4d1ba9fea4bd91dd5339d94e42824 230 Pfam PF04205 FMN-binding domain 109 208 1.7E-14 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Thivi_0825 27a260f34fed14d4d40a50d4aede4005 74 Pfam PF10047 Protein of unknown function (DUF2281) 7 41 8.5E-10 T 13-10-2018 IPR018739 Domain of unknown function DUF2281 Thivi_2135 b89cf5878330f51ffd48232301430eb9 287 Pfam PF14261 Domain of unknown function (DUF4351) 231 285 1.4E-10 T 13-10-2018 IPR025587 Domain of unknown function DUF4351 Thivi_2135 b89cf5878330f51ffd48232301430eb9 287 Pfam PF11103 Protein of unknown function (DUF2887) 3 201 3.2E-41 T 13-10-2018 IPR022573 Protein of unknown function DUF2887 Thivi_0478 11638ed40d0057d9f6eaa53821a0fa31 272 Pfam PF13612 Transposase DDE domain 99 235 2.8E-17 T 13-10-2018 IPR025668 Transposase DDE domain Thivi_0206 e5376f1e3a2c144c7333f941750b840f 150 Pfam PF11103 Protein of unknown function (DUF2887) 4 107 2.9E-19 T 13-10-2018 IPR022573 Protein of unknown function DUF2887 Thivi_4413 f612d5fa8d4def0ef05d3c9ddb5038a9 194 Gene3D G3DSA:1.10.530.10 43 170 1.5E-9 T 13-10-2018 Thivi_4413 f612d5fa8d4def0ef05d3c9ddb5038a9 194 SUPERFAMILY SSF53955 17 126 6.75E-7 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily Thivi_4070 a4955a883ff5e5ce57ffb6eb66ef8933 97 SUPERFAMILY SSF46626 8 90 2.19E-6 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Thivi_2487 bedd9e3f5fc73236e8a9d0372560f1d2 89 Pfam PF13711 Domain of unknown function (DUF4160) 9 73 1.5E-21 T 13-10-2018 IPR025427 Protein of unknown function DUF4160 Thivi_3978 b486fbbf70ee77b4aff69fe50fcc509e 222 Gene3D G3DSA:3.40.1550.10 5 176 2.9E-19 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_3978 b486fbbf70ee77b4aff69fe50fcc509e 222 SUPERFAMILY SSF103039 12 165 5.1E-20 T 13-10-2018 IPR028976 CheC-like superfamily Thivi_3978 b486fbbf70ee77b4aff69fe50fcc509e 222 Pfam PF11813 Protein of unknown function (DUF3334) 4 222 2.9E-110 T 13-10-2018 IPR024513 Protein of unknown function DUF3334 Thivi_1733 aa65e746317b40cedffdb5cd42a2c235 260 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 220 243 1.1E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_1733 aa65e746317b40cedffdb5cd42a2c235 260 Pfam PF07589 PEP-CTERM motif 219 243 1.5E-6 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain Thivi_2541 676eeba4abfee5c9bfc1aed981e6143b 484 PIRSF PIRSF006247 1 484 8.9E-164 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Thivi_2541 676eeba4abfee5c9bfc1aed981e6143b 484 Pfam PF02386 Cation transport protein 304 478 2.9E-24 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Thivi_2541 676eeba4abfee5c9bfc1aed981e6143b 484 Pfam PF02386 Cation transport protein 45 281 1.5E-43 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Thivi_4431 08249d75eee7146d0568915af317d783 75 Gene3D G3DSA:2.60.120.260 4 73 4.9E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_4431 08249d75eee7146d0568915af317d783 75 SUPERFAMILY SSF49785 6 68 1.56E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily Thivi_0842 5cee326ae152a1070b675623121a3366 250 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 164 3.1E-15 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Thivi_1922 7346ab622e301fcd2c7148d8b72bea3f 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 82 5.5E-23 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Thivi_1922 7346ab622e301fcd2c7148d8b72bea3f 142 SUPERFAMILY SSF54534 4 141 1.36E-40 T 13-10-2018 Thivi_1922 7346ab622e301fcd2c7148d8b72bea3f 142 Gene3D G3DSA:3.10.50.40 4 142 3.0E-46 T 13-10-2018 Thivi_0929 e7662f6d855e031bd1955e127d34df8c 401 Pfam PF12704 MacB-like periplasmic core domain 22 243 4.6E-32 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_0929 e7662f6d855e031bd1955e127d34df8c 401 Pfam PF02687 FtsX-like permease family 306 394 1.5E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_2875 d4a044e9d4a49975ba73f7adc24c968e 90 Gene3D G3DSA:1.20.5.780 1 88 2.2E-26 T 13-10-2018 Thivi_2875 d4a044e9d4a49975ba73f7adc24c968e 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 85 2.3E-23 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 Thivi_2875 d4a044e9d4a49975ba73f7adc24c968e 90 SUPERFAMILY SSF47598 6 81 3.34E-20 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Thivi_0725 c83e7f45e059919d0d9ce1215303bd24 416 Pfam PF02687 FtsX-like permease family 302 409 5.7E-13 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_0725 c83e7f45e059919d0d9ce1215303bd24 416 Pfam PF12704 MacB-like periplasmic core domain 28 241 4.5E-17 T 13-10-2018 IPR025857 MacB-like periplasmic core domain Thivi_0725 c83e7f45e059919d0d9ce1215303bd24 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 4.7E-151 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Thivi_3278 d2dd3dd64ca5ce87097bb115307907da 183 Pfam PF10816 Domain of unknown function (DUF2760) 60 182 1.9E-52 T 13-10-2018 IPR021212 Domain of unknown function DUF2760 Thivi_1448 e6470539af6cfb5d13c6b632830fc004 200 Pfam PF11198 Protein of unknown function (DUF2857) 3 161 1.4E-24 T 13-10-2018 IPR021364 Protein of unknown function DUF2857 Thivi_1267 a81a9f7e64ab653a2efd8046b80dbe03 320 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 2.6E-86 T 13-10-2018 IPR007296 Domain of unknown function DUF403 Thivi_3765 4e61725714f232acbc750b7215715409 324 Pfam PF13557 Putative MetA-pathway of phenol degradation 82 319 6.5E-60 T 13-10-2018 IPR025737 MetA-pathway of phenol degradation, putative Thivi_2479 931b62b657172f4f2481a73fcb4d059c 145 Pfam PF11026 Protein of unknown function (DUF2721) 17 142 3.2E-35 T 13-10-2018 IPR021279 Protein of unknown function DUF2721 Thivi_4162 6a0fd2f2a118c7ab1f9267561548f27d 471 SUPERFAMILY SSF56935 71 457 6.11E-18 T 13-10-2018 Thivi_3559 b32a18a39d1d32da656a8ac8ef4ac645 331 Pfam PF01757 Acyltransferase family 13 312 6.0E-23 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Thivi_1042 492918b04c42450ec003d7889675cbf8 169 Pfam PF05751 FixH 16 164 1.2E-29 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH Thivi_4126 55ec2981c3a2f0a195a17161fe491fe9 255 Pfam PF07103 Protein of unknown function (DUF1365) 9 249 8.2E-62 T 13-10-2018 IPR010775 Protein of unknown function DUF1365 Thivi_4072 a29e70f0b14784f4dc82180e86f7d235 137 Pfam PF07179 SseB protein N-terminal domain 11 128 3.1E-12 T 13-10-2018 IPR009839 SseB protein N-terminal domain Thivi_2833 e96c7f2c41c07d7de0c520a0ee9faa37 161 Pfam PF05981 CreA protein 22 153 5.9E-53 T 13-10-2018 IPR010292 Uncharacterised protein family CreA Thivi_2833 e96c7f2c41c07d7de0c520a0ee9faa37 161 PIRSF PIRSF003174 1 161 8.9E-60 T 13-10-2018 IPR010292 Uncharacterised protein family CreA Thivi_1551 ed61fd139807f41ccf09b05e98a2212c 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 50 4.4E-8 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Thivi_2783 8be0116e25883a6f65c52978b1695de6 371 Pfam PF00953 Glycosyl transferase family 4 82 233 5.9E-26 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Thivi_0049 81c6aa0ff7fc2e33159b59a7a4b9fc39 164 Pfam PF08909 Domain of unknown function (DUF1854) 34 162 3.1E-42 T 13-10-2018 IPR015005 Domain of unknown function DUF1854 Thivi_3499 08c9e4ea8fbe4eecc26109af9ad1ac08 413 Pfam PF14130 Domain of unknown function (DUF4297) 17 222 2.5E-52 T 13-10-2018 IPR025382 Domain of unknown function DUF4297 Thivi_1410 d51ed4d1ade2858559914fe0e2ddb9ff 197 Pfam PF12263 Protein of unknown function (DUF3611) 13 188 9.1E-38 T 13-10-2018 IPR022051 Protein of unknown function DUF3611 Thivi_1787 7f28d7ea3fcfb376a45ea8ab57cd8cfa 116 Pfam PF03692 Putative zinc- or iron-chelating domain 34 102 2.5E-9 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Thivi_0622 2ae712e1999bdb382f5b4bc4c5642f11 149 Pfam PF06853 Protein of unknown function (DUF1249) 14 127 9.2E-33 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 Thivi_3672 63292c11d7fb64ed8321b8526e9e9bca 466 Pfam PF07282 Putative transposase DNA-binding domain 346 409 2.3E-6 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Thivi_0834 9c15638fbe797295f40cabfbac7fd460 764 Pfam PF01471 Putative peptidoglycan binding domain 671 708 7.6E-6 T 13-10-2018 IPR002477 Peptidoglycan binding-like Thivi_0834 9c15638fbe797295f40cabfbac7fd460 764 SUPERFAMILY SSF47090 633 710 3.45E-6 T 13-10-2018 IPR036365 PGBD-like superfamily Thivi_3523 b82838a6f3027514febd31f1a3ed7537 44 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 8 40 8.8E-8 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Thivi_3532 742f3b8163552dda94b37b3d206cd8a1 146 Pfam PF07030 Protein of unknown function (DUF1320) 4 123 9.5E-20 T 13-10-2018 IPR009752 Bacteriophage Mu, Gp36 Thivi_3425 173a8a850e6a55eedcb75e72f31dad71 405 Pfam PF02687 FtsX-like permease family 304 398 1.5E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Thivi_3354 55e892f941a8712dd53847719fb818c6 264 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 122 252 3.9E-27 T 13-10-2018 IPR019262 Domain of unknown function DUF2272 Thivi_3273 ff99e51bc1914f49fe9b3ab10e155de8 317 SUPERFAMILY SSF64182 5 315 6.28E-42 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily Thivi_1187 a1adba501b05e437b10395e4edc8f5fe 66 Pfam PF11127 Protein of unknown function (DUF2892) 5 60 1.0E-14 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Thivi_1827 b252f43f4e0c481ea0247d58ae4566c8 66 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 3.2E-16 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 Thivi_0425 53d6936287911b3d547cee18b0addd43 84 SUPERFAMILY SSF143011 5 75 1.83E-9 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Thivi_1810 6b823cdf85b0fe87d6f256d8f08d7fa8 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 179 4.7E-64 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 Thivi_2483 41b94c9d565a9fe2217d50985e07bcb9 459 Pfam PF04932 O-Antigen ligase 223 385 2.1E-17 T 13-10-2018 IPR007016 O-antigen ligase-related Thivi_3263 bc9e5d59f51f3fc32326a1af7475a630 282 SUPERFAMILY SSF81345 10 262 1.57E-35 T 13-10-2018 IPR037294 ABC transporter, BtuC-like Thivi_3263 bc9e5d59f51f3fc32326a1af7475a630 282 Pfam PF00950 ABC 3 transport family 11 265 3.3E-72 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Thivi_3682 1ba04d4b6034c18db4024b29820a7964 780 Pfam PF04892 VanZ like family 178 294 3.6E-12 T 13-10-2018 IPR006976 VanZ-like Thivi_3682 1ba04d4b6034c18db4024b29820a7964 780 Pfam PF04892 VanZ like family 324 446 5.8E-10 T 13-10-2018 IPR006976 VanZ-like Thivi_3682 1ba04d4b6034c18db4024b29820a7964 780 Pfam PF04892 VanZ like family 30 149 4.0E-15 T 13-10-2018 IPR006976 VanZ-like Thivi_3331 fbf0cdb28c3300c5f84136a80efb4126 190 Pfam PF02325 YGGT family 16 82 2.2E-20 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Thivi_3331 fbf0cdb28c3300c5f84136a80efb4126 190 Pfam PF02325 YGGT family 109 178 2.6E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 Thivi_2231 91ec1df355b23f810b1e1df9b575a0ea 212 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 23 179 3.5E-28 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Thivi_2231 91ec1df355b23f810b1e1df9b575a0ea 212 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 19 181 8.1E-33 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Thivi_0846 28fbfd4c11b49b04e8e8ca755cbd83c7 144 Pfam PF10116 Protein required for attachment to host cells 4 140 5.3E-42 T 13-10-2018 IPR019291 Host attachment protein Thivi_3988 ff484e7a81ba7c655708dda33444ec81 601 Pfam PF01496 V-type ATPase 116kDa subunit family 511 595 7.9E-9 T 13-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_0790 9cc913e61b45f675fdf6ed99e837ec44 81 Gene3D G3DSA:1.10.1220.10 5 52 2.1E-19 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Thivi_0790 9cc913e61b45f675fdf6ed99e837ec44 81 Pfam PF16762 Ribbon-helix-helix domain 5 79 1.1E-29 T 13-10-2018 IPR031914 XACb0070, ribbon-helix-helix domain Thivi_1002 2dc2ac42aafa7e4226e323b3566bfacb 178 Pfam PF01724 Domain of unknown function DUF29 28 164 2.7E-47 T 13-10-2018 IPR002636 Protein from unkown function DUF29 Thivi_1002 2dc2ac42aafa7e4226e323b3566bfacb 178 Gene3D G3DSA:1.20.1220.20 20 171 1.4E-37 T 13-10-2018 Thivi_3741 a9b5d35438475f0618128dee5cb557a5 271 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 51 218 1.9E-25 T 13-10-2018 IPR003734 Domain of unknown function DUF155 Thivi_2397 e493a21792e7e817d2fc48858dcdb196 270 Pfam PF14371 Domain of unknown function (DUF4412) 69 250 1.5E-12 T 13-10-2018 IPR025524 Domain of unknown function DUF4412 Thivi_4400 734cde581e71b49780a32e7830768a1a 221 Pfam PF11363 Protein of unknown function (DUF3164) 12 203 2.9E-50 T 13-10-2018 IPR021505 Bacteriophage B3, Orf6 Thivi_2839 3054518c3b48258380c5f729224c6eac 199 Pfam PF11845 Protein of unknown function (DUF3365) 14 198 2.2E-28 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 Thivi_3387 5a81e5e9033617eb3badd21eab52a850 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 68 3.8E-20 T 13-10-2018 IPR012662 Conserved hypothetical protein CHP02449 Thivi_0171 eef9227f16a191728eddbe700d0c14c7 447 Gene3D G3DSA:3.30.70.1070 353 435 4.4E-12 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Thivi_0298 f644cea9ab4ce2f0b6f812e6b14b535a 421 Pfam PF01384 Phosphate transporter family 26 409 1.7E-116 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Thivi_0297 d1a18f122923e0ba6958e4ccc9f4e8aa 220 SUPERFAMILY SSF52540 35 187 2.27E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thivi_2658 d7c1893e1f6f77c56e75edd35f6d8f8c 119 Pfam PF13384 Homeodomain-like domain 86 116 1.3E-5 T 13-10-2018 Thivi_2658 d7c1893e1f6f77c56e75edd35f6d8f8c 119 Gene3D G3DSA:1.10.10.60 74 116 2.0E-5 T 13-10-2018 Thivi_1021 2e5da1c3cf17c13ff8e6bf557cadfb3c 222 SUPERFAMILY SSF56300 98 187 2.01E-8 T 13-10-2018 Thivi_3985 7a8d7b5996c696db211e853ff622f22a 231 Pfam PF10962 Protein of unknown function (DUF2764) 91 215 1.1E-4 T 13-10-2018 IPR024492 Protein of unknown function DUF2764 Thivi_3773 5b9d7dfc22722ad12a978df68ea2c0a0 133 Pfam PF17228 Sulphur globule protein 23 129 3.7E-21 T 13-10-2018 IPR035173 Sulphur globule protein Thivi_3371 29c93b6c33d145887aa51322d9e2da8a 143 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 6.2E-56 T 13-10-2018 IPR014993 Protein of unknown function DUF1841 Thivi_1473 d63f65c3ad80d9bc4257766be5c8d8de 960 Pfam PF08665 PglZ domain 487 532 1.2E-5 T 13-10-2018 IPR013973 PglZ domain Thivi_1775 88aa5c043e9f9fd1188724ad3a9ec365 631 Pfam PF01496 V-type ATPase 116kDa subunit family 216 384 8.0E-20 T 13-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_1775 88aa5c043e9f9fd1188724ad3a9ec365 631 Pfam PF01496 V-type ATPase 116kDa subunit family 522 622 1.6E-8 T 13-10-2018 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 Reactome: R-HSA-1222556|Reactome: R-HSA-77387|Reactome: R-HSA-917977|Reactome: R-HSA-983712 Thivi_4129 61e8002cf67931338fc97c068e83ee7f 192 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 77 82 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Thivi_1365 fcb0ddb61e9f8a60541246f2e2cd3fc8 144 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 3.8E-7 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Thivi_1365 fcb0ddb61e9f8a60541246f2e2cd3fc8 144 PIRSF PIRSF006173 1 143 5.7E-58 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Thivi_1365 fcb0ddb61e9f8a60541246f2e2cd3fc8 144 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 36.429 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Thivi_0555 80f52647bdfa0156f13796f64e3f01d5 416 Pfam PF03916 Polysulphide reductase, NrfD 43 333 3.5E-66 T 13-10-2018 IPR005614 NrfD family Thivi_1598 2cdf7a6544dabfcda2f9b8bd0cba1b7e 482 Pfam PF06122 Conjugative relaxosome accessory transposon protein 33 398 1.1E-97 T 13-10-2018 IPR010927 Type IV conjugative transfer system protein TraH Thivi_4600 e443e8ff406bb265ca6b41bfe30703c7 128 Pfam PF12616 Protein of unknown function (DUF3775) 54 124 6.1E-23 T 13-10-2018 IPR022254 Protein of unknown function DUF3775 Thivi_1745 6de3354067615d6e8a7d2de40bb81dab 526 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 57 215 6.4E-25 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Thivi_1048 8779a945e80d57f1a6feceb9f3302198 82 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 1.5E-17 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Thivi_2947 e24c620193a87970c38bb27ef1f7f946 428 Pfam PF13546 DDE superfamily endonuclease 33 218 3.1E-12 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain Thivi_2914 97c7da83e0f2e94202ce16dd3d5c2564 85 SUPERFAMILY SSF46785 3 48 9.59E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Thivi_4068 c520dd808eadec03697188040b5a3324 132 Gene3D G3DSA:3.90.20.10 36 116 1.4E-11 T 13-10-2018 Thivi_2385 42685280e85c1e8ec98218c847e07058 81 Pfam PF13627 Prokaryotic lipoprotein-attachment site 13 34 9.4E-10 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site Thivi_4420 d1d4e858455f60de9ab5494f2994baa8 522 Pfam PF06074 Protein of unknown function (DUF935) 66 518 5.4E-91 T 13-10-2018 IPR009279 Protein of unknown function DUF935 Thivi_3525 2fab303ffed5ce7ae929396c60bc50e7 417 Pfam PF04233 Phage Mu protein F like protein 52 174 9.8E-20 T 13-10-2018 IPR006528 Phage head morphogenesis domain Thivi_1075 4c17c1ca7a99afc4d3bec4fdcc3b3b53 238 Gene3D G3DSA:3.30.70.2660 1 200 4.2E-45 T 13-10-2018 Thivi_1075 4c17c1ca7a99afc4d3bec4fdcc3b3b53 238 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 4 228 9.6E-56 T 13-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 Thivi_1075 4c17c1ca7a99afc4d3bec4fdcc3b3b53 238 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 225 1.1E-29 T 13-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Thivi_1045 a0f7b4edd63fc16d4394ee9bf601bd2c 71 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 16 60 3.2E-8 T 13-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Thivi_0641 3efc0c8a047f032e8feb3d4b94a0080b 402 SUPERFAMILY SSF56059 180 362 3.3E-14 T 13-10-2018 Thivi_0028 411e0153d8189009eb43ba8ef64249ac 569 Pfam PF02470 MlaD protein 312 410 3.6E-10 T 13-10-2018 IPR003399 Mce/MlaD Thivi_0028 411e0153d8189009eb43ba8ef64249ac 569 Pfam PF02470 MlaD protein 59 149 1.3E-12 T 13-10-2018 IPR003399 Mce/MlaD Thivi_0028 411e0153d8189009eb43ba8ef64249ac 569 Pfam PF02470 MlaD protein 174 230 8.5E-7 T 13-10-2018 IPR003399 Mce/MlaD Thivi_3947 e8e71cd320664198f950719dba41e1d3 227 Gene3D G3DSA:1.20.1260.10 38 211 3.6E-62 T 13-10-2018 IPR012347 Ferritin-like Thivi_3947 e8e71cd320664198f950719dba41e1d3 227 Pfam PF09968 Uncharacterized protein domain (DUF2202) 43 202 1.5E-55 T 13-10-2018 IPR019243 Domain of unknown function DUF2202 Thivi_3947 e8e71cd320664198f950719dba41e1d3 227 SUPERFAMILY SSF47240 42 182 6.81E-10 T 13-10-2018 IPR009078 Ferritin-like superfamily Thivi_2553 2ac3f27dcc7a88a641f19cc0e6f02c52 48 Pfam PF08085 Entericidin EcnA/B family 21 41 4.9E-10 T 13-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 Thivi_3464 89604f6a36757aa4ade503a0f6a753b2 196 Pfam PF11159 Protein of unknown function (DUF2939) 51 138 8.2E-12 T 13-10-2018 IPR021330 Protein of unknown function DUF2939 Thivi_3628 04c434d48380cb37046fc728c17e6911 329 Pfam PF01882 Protein of unknown function DUF58 218 267 3.8E-13 T 13-10-2018 IPR002881 Domain of unknown function DUF58 Thivi_0417 9d229ea954ce51ae7d85ae22ff717ae6 192 Gene3D G3DSA:3.30.450.20 67 190 1.9E-5 T 13-10-2018 Thivi_3877 2529ff3b703e8e237140cb7d981ae955 256 Pfam PF01618 MotA/TolQ/ExbB proton channel family 150 239 1.4E-12 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Thivi_3749 0ab39577cf16d515c106e35be6e19925 104 Pfam PF11743 Protein of unknown function (DUF3301) 4 93 1.4E-27 T 13-10-2018 IPR021732 Protein of unknown function DUF3301