Thimo_0001 IPR002696 Putative membrane protein insertion efficiency factor Thimo_0002 IPR000100 Ribonuclease P Thimo_0002 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_0002 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0003 IPR001957 Chromosomal replication control, initiator DnaA Thimo_0003 IPR003593 AAA+ ATPase domain Thimo_0003 IPR010921 Trp repressor/replication initiator Thimo_0003 IPR013159 Chromosomal replication initiator, DnaA C-terminal Thimo_0003 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) Thimo_0003 IPR018312 Chromosomal replication control, initiator DnaA, conserved site Thimo_0003 IPR020591 Chromosomal replication control, initiator DnaA-like Thimo_0003 IPR024633 DnaA N-terminal domain Thimo_0003 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0003 IPR038454 Thimo_0003 Thimo_0004 IPR001001 DNA polymerase III, beta chain Thimo_0004 IPR022634 DNA polymerase III, beta chain, N-terminal Thimo_0004 IPR022635 DNA polymerase III, beta chain, C-terminal Thimo_0004 IPR022637 DNA polymerase III, beta chain, central Thimo_0005 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0005 IPR007197 Radical SAM Thimo_0005 IPR013704 Uncharacterised protein family UPF0313, N-terminal Thimo_0005 IPR020612 Methylthiotransferase, conserved site Thimo_0005 IPR022946 Uncharacterised protein family UPF0313 Thimo_0005 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0005 IPR024560 Uncharacterised protein family UPF0313, C-terminal Thimo_0006 IPR005532 Formylglycine-generating sulphatase enzyme domain Thimo_0006 IPR016187 C-type lectin fold Thimo_0006 IPR017806 Ergothioneine biosynthesis protein EgtB Thimo_0006 IPR024775 DinB-like domain Thimo_0006 IPR034660 Thimo_0006 Thimo_0007 IPR017804 Methyltransferase EgtD-like Thimo_0007 IPR019257 Histidine-specific methyltransferase, SAM-dependent Thimo_0007 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0007 IPR035094 Thimo_0007 Thimo_0009 IPR004291 Transposase, IS66 Thimo_0009 IPR024463 Transposase TnpC, homeodomain Thimo_0009 IPR039552 Thimo_0009 Thimo_0010 IPR008878 Transposase IS66, Orf2 Thimo_0012 IPR024461 Protein of unknown function DUF1640 Thimo_0013 IPR001082 Fimbrial protein pilin Thimo_0013 IPR012902 Prokaryotic N-terminal methylation site Thimo_0014 IPR011990 Tetratricopeptide-like helical domain Thimo_0015 IPR001173 Glycosyltransferase 2-like Thimo_0015 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0017 IPR001296 Glycosyl transferase, family 1 Thimo_0017 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_0018 IPR013216 Methyltransferase type 11 Thimo_0018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0019 IPR001296 Glycosyl transferase, family 1 Thimo_0021 IPR002514 Transposase IS3/IS911family Thimo_0021 IPR009057 Homeodomain-like Thimo_0022 IPR001584 Integrase, catalytic core Thimo_0022 IPR009057 Homeodomain-like Thimo_0022 IPR012337 Ribonuclease H-like domain Thimo_0022 IPR036397 Thimo_0022 Thimo_0023 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0024 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_0025 IPR002716 PIN domain Thimo_0025 IPR029060 PIN domain-like Thimo_0026 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_0026 IPR036165 Thimo_0026 Thimo_0027 IPR016181 Acyl-CoA N-acyltransferase Thimo_0027 IPR038740 Thimo_0027 Thimo_0028 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Thimo_0028 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_0028 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_0028 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_0029 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0032 IPR002716 PIN domain Thimo_0032 IPR022907 VapC family Thimo_0032 IPR029060 PIN domain-like Thimo_0033 IPR007159 AbrB-like domain Thimo_0033 IPR037914 Thimo_0033 Thimo_0035 IPR001451 Bacterial transferase hexapeptide repeat Thimo_0035 IPR011004 Trimeric LpxA-like Thimo_0035 IPR018357 Hexapeptide transferase, conserved site Thimo_0036 IPR000683 Oxidoreductase, N-terminal Thimo_0036 IPR004104 Oxidoreductase, C-terminal Thimo_0036 IPR036291 Thimo_0036 Thimo_0038 IPR002716 PIN domain Thimo_0038 IPR006226 Ribonuclease VapC24/VapC25 Thimo_0038 IPR022907 VapC family Thimo_0038 IPR029060 PIN domain-like Thimo_0040 IPR001626 ABC-3 Thimo_0040 IPR037294 Thimo_0040 Thimo_0041 IPR003439 ABC transporter-like Thimo_0041 IPR003593 AAA+ ATPase domain Thimo_0041 IPR017871 ABC transporter, conserved site Thimo_0041 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0042 IPR006127 Periplasmic solute binding protein family Thimo_0043 IPR003755 HPr(Ser) kinase/phosphorylase Thimo_0043 IPR011104 HPr kinase/phosphorylase, C-terminal Thimo_0043 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal Thimo_0043 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like Thimo_0044 IPR001482 Type II secretion system protein E Thimo_0044 IPR003593 AAA+ ATPase domain Thimo_0044 IPR007831 General secretory system II, protein E, N-terminal Thimo_0044 IPR013369 Type II secretion system GspE Thimo_0044 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0044 IPR037257 Thimo_0044 Thimo_0045 IPR003004 GspF/PilC family Thimo_0045 IPR018076 Type II secretion system F domain Thimo_0046 IPR000983 Bacterial general secretion pathway protein G-type pilin Thimo_0046 IPR010054 General secretion pathway protein G Thimo_0046 IPR012902 Prokaryotic N-terminal methylation site Thimo_0046 IPR013545 Type II secretion system protein G Thimo_0047 IPR002416 Type II secretion system protein H Thimo_0047 IPR012902 Prokaryotic N-terminal methylation site Thimo_0047 IPR022346 General secretion pathway, GspH Thimo_0048 IPR012902 Prokaryotic N-terminal methylation site Thimo_0049 IPR012902 Prokaryotic N-terminal methylation site Thimo_0050 IPR005628 General secretion pathway protein K Thimo_0050 IPR038072 Thimo_0050 Thimo_0051 IPR005883 Type IV pilus assembly protein PilM Thimo_0051 IPR007813 Fimbrial assembly PilN Thimo_0052 IPR034756 Thimo_0052 Thimo_0054 IPR001775 GspD/PilQ family Thimo_0054 IPR004846 Type II/III secretion system Thimo_0054 IPR005644 NolW-like Thimo_0054 IPR013356 Type II secretion system GspD Thimo_0054 IPR038591 Thimo_0054 Thimo_0055 IPR004147 UbiB domain Thimo_0055 IPR010232 Probable protein kinase UbiB Thimo_0055 IPR011009 Protein kinase-like domain Thimo_0056 IPR003033 SCP2 sterol-binding domain Thimo_0056 IPR036527 Thimo_0056 Thimo_0057 IPR004033 UbiE/COQ5 methyltransferase Thimo_0057 IPR023576 UbiE/COQ5 methyltransferase, conserved site Thimo_0057 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0058 IPR003111 Peptidase S16, lon N-terminal Thimo_0058 IPR015947 PUA-like domain Thimo_0059 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Thimo_0059 IPR029052 Metallo-dependent phosphatase-like Thimo_0060 IPR003010 Carbon-nitrogen hydrolase Thimo_0060 IPR004563 Apolipoprotein N-acyltransferase Thimo_0060 IPR036526 Thimo_0060 Thimo_0061 IPR001584 Integrase, catalytic core Thimo_0061 IPR012337 Ribonuclease H-like domain Thimo_0063 IPR000713 Mur ligase, N-terminal Thimo_0063 IPR004101 Mur ligase, C-terminal Thimo_0063 IPR005757 Murein peptide ligase Thimo_0063 IPR013221 Mur ligase, central Thimo_0063 IPR036565 Thimo_0063 Thimo_0063 IPR036615 Thimo_0063 Thimo_0064 IPR003382 Flavoprotein Thimo_0064 IPR004507 Decarboxylase UbiX/Pad1 Thimo_0064 IPR036551 Thimo_0064 Thimo_0066 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Thimo_0066 IPR023346 Lysozyme-like domain Thimo_0066 IPR039561 Thimo_0066 Thimo_0068 IPR025902 LssY-like C-terminal domain Thimo_0068 IPR032816 Thimo_0068 Thimo_0068 IPR036938 Thimo_0068 Thimo_0069 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase Thimo_0069 IPR005814 Aminotransferase class-III Thimo_0069 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_0069 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_0069 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_0070 IPR013785 Aldolase-type TIM barrel Thimo_0070 IPR022998 Thiamin phosphate synthase superfamily Thimo_0070 IPR034291 Thimo_0070 Thimo_0070 IPR036206 Thimo_0070 Thimo_0071 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Thimo_0071 IPR029056 Ribokinase-like Thimo_0072 IPR018527 Rubredoxin, iron-binding site Thimo_0072 IPR024922 Rubredoxin Thimo_0072 IPR024935 Rubredoxin domain Thimo_0073 IPR032025 Thimo_0073 Thimo_0074 IPR000361 FeS cluster biogenesis Thimo_0074 IPR016092 FeS cluster insertion protein Thimo_0074 IPR035903 Thimo_0074 Thimo_0075 IPR000534 Semialdehyde dehydrogenase, NAD-binding Thimo_0075 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 Thimo_0075 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Thimo_0075 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site Thimo_0075 IPR036291 Thimo_0075 Thimo_0076 IPR013986 DExx box DNA helicase domain Thimo_0076 IPR014017 DNA helicase, UvrD-like, C-terminal Thimo_0076 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0076 IPR034739 Thimo_0076 Thimo_0077 IPR018389 Bacterial extracellular solute-binding protein, family 7 Thimo_0077 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Thimo_0077 IPR038404 Thimo_0077 Thimo_0078 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related Thimo_0078 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0078 IPR007197 Radical SAM Thimo_0078 IPR010723 HemN, C-terminal domain Thimo_0078 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0079 IPR002150 Ribosomal protein L31 Thimo_0079 IPR027491 Ribosomal protein L31 type A Thimo_0079 IPR034704 Thimo_0079 Thimo_0081 IPR002020 Citrate synthase-like Thimo_0081 IPR010953 Citrate synthase, type I Thimo_0081 IPR016142 Citrate synthase-like, large alpha subdomain Thimo_0081 IPR016143 Citrate synthase-like, small alpha subdomain Thimo_0081 IPR019810 Citrate synthase active site Thimo_0081 IPR024176 Citrate synthase, bacterial-type Thimo_0081 IPR036969 Thimo_0081 Thimo_0083 IPR003494 SHS2 domain inserted in FtsA Thimo_0083 IPR005883 Type IV pilus assembly protein PilM Thimo_0084 IPR007813 Fimbrial assembly PilN Thimo_0085 IPR007445 Pilus assembly protein, PilO Thimo_0085 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Thimo_0086 IPR007446 Pilus assembly protein PilP Thimo_0087 IPR001775 GspD/PilQ family Thimo_0087 IPR004845 Type II secretion system GspD, conserved site Thimo_0087 IPR004846 Type II/III secretion system Thimo_0087 IPR005644 NolW-like Thimo_0087 IPR011662 Secretin/TonB, short N-terminal Thimo_0087 IPR013355 Type IV pilus secretin PilQ Thimo_0087 IPR021731 AMIN domain Thimo_0087 IPR038591 Thimo_0087 Thimo_0088 IPR000623 Shikimate kinase/Threonine synthase-like 1 Thimo_0088 IPR023000 Shikimate kinase, conserved site Thimo_0088 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0088 IPR031322 Thimo_0088 Thimo_0089 IPR016037 3-dehydroquinate synthase AroB Thimo_0089 IPR030960 Thimo_0089 Thimo_0089 IPR030963 Thimo_0089 Thimo_0090 IPR002489 Glutamate synthase, alpha subunit, C-terminal Thimo_0090 IPR002932 Glutamate synthase domain Thimo_0090 IPR006982 Glutamate synthase, central-N Thimo_0090 IPR013785 Aldolase-type TIM barrel Thimo_0090 IPR017932 Glutamine amidotransferase type 2 domain Thimo_0090 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_0090 IPR036485 Thimo_0090 Thimo_0091 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Thimo_0091 IPR009051 Alpha-helical ferredoxin Thimo_0091 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_0091 IPR028261 Dihydroprymidine dehydrogenase domain II Thimo_0091 IPR036188 Thimo_0091 Thimo_0092 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thimo_0092 IPR024706 Peroxiredoxin, AhpC-type Thimo_0092 IPR036249 Thimo_0092 Thimo_0093 IPR001789 Signal transduction response regulator, receiver domain Thimo_0093 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0093 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0093 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0093 IPR011006 CheY-like superfamily Thimo_0093 IPR036097 Thimo_0093 Thimo_0093 IPR036890 Thimo_0093 Thimo_0094 IPR000014 PAS domain Thimo_0094 IPR001610 PAC motif Thimo_0094 IPR001789 Signal transduction response regulator, receiver domain Thimo_0094 IPR011006 CheY-like superfamily Thimo_0094 IPR035965 Thimo_0094 Thimo_0095 IPR001845 HTH ArsR-type DNA-binding domain Thimo_0095 IPR036388 Thimo_0095 Thimo_0095 IPR036390 Thimo_0095 Thimo_0096 IPR001045 Spermidine/spermine synthases family Thimo_0096 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0096 IPR030373 Thimo_0096 Thimo_0096 IPR035246 Thimo_0096 Thimo_0096 IPR037163 Thimo_0096 Thimo_0097 IPR001905 Ammonium transporter Thimo_0097 IPR018047 Ammonium transporter, conserved site Thimo_0097 IPR024041 Ammonium transporter AmtB-like domain Thimo_0097 IPR029020 Ammonium/urea transporter Thimo_0098 IPR002187 Nitrogen regulatory protein PII Thimo_0098 IPR002332 Nitrogen regulatory protein P-II, urydylation site Thimo_0098 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_0098 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_0098 IPR017918 Nitrogen regulatory protein PII, conserved site Thimo_0099 IPR010239 Conserved hypothetical protein CHP02001 Thimo_0099 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel Thimo_0100 IPR007475 Membrane fusogenic activity Thimo_0101 IPR000523 Magnesium chelatase, ChlI subunit Thimo_0101 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase Thimo_0101 IPR003593 AAA+ ATPase domain Thimo_0101 IPR004482 Mg chelatase-related protein Thimo_0101 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_0101 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0101 IPR025158 Mg chelatase-related protein, C-terminal domain Thimo_0101 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0102 IPR003439 ABC transporter-like Thimo_0102 IPR003593 AAA+ ATPase domain Thimo_0102 IPR017871 ABC transporter, conserved site Thimo_0102 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0102 IPR032781 Thimo_0102 Thimo_0103 IPR000811 Glycosyl transferase, family 35 Thimo_0103 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thimo_0103 IPR035090 Thimo_0103 Thimo_0104 IPR001801 Histone-like protein H-NS Thimo_0105 IPR001478 PDZ domain Thimo_0105 IPR007963 Peptidase M61, catalytic domain Thimo_0105 IPR024191 Peptidase M61 Thimo_0105 IPR036034 Thimo_0105 Thimo_0106 IPR003142 Biotin protein ligase, C-terminal Thimo_0106 IPR004143 Biotin/lipoate A/B protein ligase Thimo_0106 IPR004408 Biotin--acetyl-CoA-carboxylase ligase Thimo_0106 IPR008988 Transcriptional repressor, C-terminal Thimo_0106 IPR013196 Helix-turn-helix, type 11 Thimo_0106 IPR030855 Thimo_0106 Thimo_0106 IPR036388 Thimo_0106 Thimo_0106 IPR036390 Thimo_0106 Thimo_0107 IPR000014 PAS domain Thimo_0107 IPR000160 GGDEF domain Thimo_0107 IPR001633 EAL domain Thimo_0107 IPR029787 Nucleotide cyclase Thimo_0107 IPR035919 Thimo_0107 Thimo_0107 IPR035965 Thimo_0107 Thimo_0108 IPR007036 Succinylglutamate desuccinylase/aspartoacylase Thimo_0110 IPR001915 Peptidase M48 Thimo_0110 IPR011990 Tetratricopeptide-like helical domain Thimo_0110 IPR030873 Thimo_0110 Thimo_0111 IPR004960 Bacterial lipid A biosynthesis acyltransferase Thimo_0112 IPR001763 Rhodanese-like domain Thimo_0112 IPR036873 Thimo_0112 Thimo_0113 IPR000944 Transcription regulator Rrf2-like Thimo_0113 IPR036388 Thimo_0113 Thimo_0113 IPR036390 Thimo_0113 Thimo_0114 IPR002816 Pheromone shutdown, TraB Thimo_0114 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal Thimo_0116 IPR002549 Uncharacterised protein family UPF0118 Thimo_0117 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_0117 IPR036105 Thimo_0117 Thimo_0118 IPR008538 Domain of unknown function DUF820 Thimo_0118 IPR011335 Restriction endonuclease type II-like Thimo_0119 IPR002821 Hydantoinase/oxoprolinase Thimo_0119 IPR008040 Hydantoinaseoxoprolinase, N-terminal Thimo_0120 IPR006218 DAHP synthetase I/KDSA Thimo_0120 IPR006219 DHAP synthase, class 1 Thimo_0120 IPR013785 Aldolase-type TIM barrel Thimo_0121 IPR002177 DNA-binding protein Dps Thimo_0121 IPR008331 Ferritin/DPS protein domain Thimo_0121 IPR009078 Ferritin-like superfamily Thimo_0121 IPR012347 Ferritin-related Thimo_0121 IPR023188 DNA-binding protein Dps, conserved site Thimo_0122 IPR001453 Molybdopterin binding domain Thimo_0122 IPR036425 Thimo_0122 Thimo_0123 IPR000889 Glutathione peroxidase Thimo_0123 IPR029759 Glutathione peroxidase active site Thimo_0123 IPR036249 Thimo_0123 Thimo_0124 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thimo_0124 IPR017938 Riboflavin synthase-like beta-barrel Thimo_0124 IPR039261 Thimo_0124 Thimo_0125 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thimo_0125 IPR036938 Thimo_0125 Thimo_0126 IPR038731 Thimo_0126 Thimo_0127 IPR001173 Glycosyltransferase 2-like Thimo_0127 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0128 IPR002068 Alpha crystallin/Hsp20 domain Thimo_0128 IPR008978 HSP20-like chaperone Thimo_0129 IPR001478 PDZ domain Thimo_0129 IPR001940 Peptidase S1C Thimo_0129 IPR009003 Trypsin-like cysteine/serine peptidase domain Thimo_0129 IPR011782 Peptidase S1C, Do Thimo_0129 IPR036034 Thimo_0129 Thimo_0130 IPR007462 Protein of unknown function DUF502 Thimo_0131 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Thimo_0132 IPR005746 Thioredoxin Thimo_0132 IPR013766 Thioredoxin domain Thimo_0132 IPR017937 Thioredoxin, conserved site Thimo_0132 IPR036249 Thimo_0132 Thimo_0133 IPR001731 Porphobilinogen synthase Thimo_0133 IPR013785 Aldolase-type TIM barrel Thimo_0133 IPR030656 Thimo_0133 Thimo_0134 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thimo_0134 IPR011342 Shikimate dehydrogenase Thimo_0134 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal Thimo_0134 IPR022893 Shikimate, quinate/shikimate dehydrogenase Thimo_0134 IPR036291 Thimo_0134 Thimo_0135 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thimo_0135 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_0135 IPR013328 Dehydrogenase, multihelical Thimo_0135 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type Thimo_0135 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain Thimo_0135 IPR036291 Thimo_0135 Thimo_0137 IPR002510 TldD/PmbA Thimo_0137 IPR035068 Thimo_0137 Thimo_0137 IPR036059 Thimo_0137 Thimo_0138 IPR002510 TldD/PmbA Thimo_0138 IPR036059 Thimo_0138 Thimo_0139 IPR014174 CRISPR-associated protein, Cas6-related Thimo_0142 IPR003819 Taurine catabolism dioxygenase TauD/TfdA Thimo_0143 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Thimo_0143 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Thimo_0143 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit Thimo_0143 IPR036136 Thimo_0143 Thimo_0144 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain Thimo_0144 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain Thimo_0144 IPR011808 Sulphite reductase, dissimilatory-type beta subunit Thimo_0144 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0144 IPR036136 Thimo_0144 Thimo_0145 IPR003787 Sulphur relay, DsrE/F-like protein Thimo_0145 IPR017463 Sulphur relay, TusD/DsrE Thimo_0145 IPR027396 DsrEFH-like Thimo_0146 IPR003787 Sulphur relay, DsrE/F-like protein Thimo_0146 IPR017462 Sulphur relay, TusC/DsrF Thimo_0146 IPR027396 DsrEFH-like Thimo_0147 IPR007215 Sulphur relay, TusB/DsrH Thimo_0147 IPR027396 DsrEFH-like Thimo_0148 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_0148 IPR025526 DsrC-like domain Thimo_0149 IPR023234 NarG-like domain Thimo_0149 IPR036197 Thimo_0149 Thimo_0150 IPR004017 Cysteine-rich domain Thimo_0150 IPR009051 Alpha-helical ferredoxin Thimo_0150 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0150 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0151 IPR009051 Alpha-helical ferredoxin Thimo_0151 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0151 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0151 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_0151 IPR028261 Dihydroprymidine dehydrogenase domain II Thimo_0151 IPR036188 Thimo_0151 Thimo_0152 IPR036280 Thimo_0152 Thimo_0153 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0153 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0154 IPR005614 NrfD family Thimo_0155 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0155 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Thimo_0155 IPR011698 CobB/CobQ-like glutamine amidotransferase Thimo_0155 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0155 IPR029062 Class I glutamine amidotransferase-like Thimo_0156 IPR000361 FeS cluster biogenesis Thimo_0156 IPR035903 Thimo_0156 Thimo_0157 IPR036188 Thimo_0157 Thimo_0158 IPR002347 Glucose/ribitol dehydrogenase Thimo_0158 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_0158 IPR036291 Thimo_0158 Thimo_0159 IPR002763 Protein of unknown function DUF72 Thimo_0159 IPR036520 Thimo_0159 Thimo_0160 IPR001279 Beta-lactamase-like Thimo_0160 IPR001763 Rhodanese-like domain Thimo_0160 IPR036866 Thimo_0160 Thimo_0160 IPR036873 Thimo_0160 Thimo_0163 IPR010279 Protein of unknown function DUF883, ElaB Thimo_0164 IPR025990 Cysteine-rich CPXCG protein Thimo_0165 IPR011704 ATPase, dynein-related, AAA domain Thimo_0165 IPR013615 CbbQ/NirQ/NorQ, C-terminal Thimo_0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0166 IPR026350 GxxExxY protein Thimo_0167 IPR002035 von Willebrand factor, type A Thimo_0167 IPR036465 Thimo_0167 Thimo_0168 IPR002686 Transposase IS200-like Thimo_0168 IPR036515 Thimo_0168 Thimo_0169 IPR004881 Ribosome biogenesis GTPase RsgA, putative Thimo_0169 IPR010914 EngC GTPase Thimo_0169 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0170 IPR025517 Domain of unknown function DUF4405 Thimo_0171 IPR006357 HAD-superfamily hydrolase, subfamily IIA Thimo_0171 IPR023214 HAD-like domain Thimo_0171 IPR036412 Thimo_0171 Thimo_0175 IPR001844 Chaperonin Cpn60 Thimo_0175 IPR002423 Chaperonin Cpn60/TCP-1 Thimo_0175 IPR018370 Chaperonin Cpn60, conserved site Thimo_0175 IPR027409 GroEL-like apical domain Thimo_0175 IPR027410 TCP-1-like chaperonin intermediate domain Thimo_0175 IPR027413 GroEL-like equatorial domain Thimo_0176 IPR011032 GroES (chaperonin 10)-like Thimo_0176 IPR018369 Chaperonin Cpn10, conserved site Thimo_0176 IPR020818 Chaperonin Cpn10 Thimo_0176 IPR037124 Thimo_0176 Thimo_0177 IPR007313 FxsA cytoplasmic membrane protein Thimo_0178 IPR004323 Divalent ion tolerance protein, CutA Thimo_0178 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_0178 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_0179 IPR003834 Cytochrome c assembly protein, transmembrane domain Thimo_0179 IPR022910 Thiol:disulphide interchange protein DsbD Thimo_0179 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Thimo_0179 IPR036249 Thimo_0179 Thimo_0179 IPR036929 Thimo_0179 Thimo_0180 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thimo_0180 IPR036249 Thimo_0180 Thimo_0181 IPR001874 Dehydroquinase, class II Thimo_0181 IPR018509 Dehydroquinase, class II, conserved site Thimo_0181 IPR036441 Thimo_0181 Thimo_0182 IPR000089 Biotin/lipoyl attachment Thimo_0182 IPR001249 Acetyl-CoA biotin carboxyl carrier Thimo_0182 IPR011053 Single hybrid motif Thimo_0183 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase Thimo_0183 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thimo_0183 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Thimo_0183 IPR005482 Biotin carboxylase, C-terminal Thimo_0183 IPR011054 Rudiment single hybrid motif Thimo_0183 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0183 IPR016185 Pre-ATP-grasp domain Thimo_0184 IPR004498 Ribosomal protein L11 methyltransferase Thimo_0184 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0185 IPR001269 tRNA-dihydrouridine synthase Thimo_0185 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 Thimo_0185 IPR013785 Aldolase-type TIM barrel Thimo_0185 IPR018517 tRNA-dihydrouridine synthase, conserved site Thimo_0185 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal Thimo_0185 IPR032887 Thimo_0185 Thimo_0186 IPR002197 DNA binding HTH domain, Fis-type Thimo_0186 IPR005412 DNA-binding protein Fis Thimo_0186 IPR009057 Homeodomain-like Thimo_0187 IPR002695 AICARFT/IMPCHase bienzyme Thimo_0187 IPR011607 Methylglyoxal synthase-like domain Thimo_0187 IPR016193 Cytidine deaminase-like Thimo_0187 IPR024051 AICAR transformylase domain Thimo_0187 IPR036914 Thimo_0187 Thimo_0188 IPR001451 Bacterial transferase hexapeptide repeat Thimo_0188 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Thimo_0188 IPR011004 Trimeric LpxA-like Thimo_0188 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal Thimo_0188 IPR037157 Thimo_0188 Thimo_0189 IPR000115 Phosphoribosylglycinamide synthetase Thimo_0189 IPR011054 Rudiment single hybrid motif Thimo_0189 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0189 IPR016185 Pre-ATP-grasp domain Thimo_0189 IPR020559 Phosphoribosylglycinamide synthetase, conserved site Thimo_0189 IPR020560 Phosphoribosylglycinamide synthetase, C-domain Thimo_0189 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Thimo_0189 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal Thimo_0189 IPR037123 Thimo_0189 Thimo_0190 IPR002142 Peptidase S49 Thimo_0190 IPR013703 Peptidase S49, N-terminal proteobacteria Thimo_0190 IPR029045 ClpP/crotonase-like domain Thimo_0191 IPR001279 Beta-lactamase-like Thimo_0191 IPR004477 ComEC/Rec2-related protein Thimo_0191 IPR004797 Competence protein ComEC/Rec2 Thimo_0191 IPR025405 Domain of unknown function DUF4131 Thimo_0191 IPR036866 Thimo_0191 Thimo_0192 IPR018639 Domain of unknown function DUF2062 Thimo_0193 IPR003439 ABC transporter-like Thimo_0193 IPR003593 AAA+ ATPase domain Thimo_0193 IPR011924 Lipoprotein releasing system, ATP-binding protein Thimo_0193 IPR017871 ABC transporter, conserved site Thimo_0193 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0194 IPR003838 Permease FtsX-like Thimo_0194 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family Thimo_0194 IPR025857 MacB-like periplasmic core domain Thimo_0195 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type Thimo_0196 IPR019587 Polyketide cyclase/dehydrase Thimo_0196 IPR023393 START-like domain Thimo_0197 IPR001991 Sodium:dicarboxylate symporter Thimo_0197 IPR036458 Thimo_0197 Thimo_0198 IPR010645 Domain of unknown function DUF1228 Thimo_0198 IPR036259 Thimo_0198 Thimo_0199 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_0199 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_0199 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thimo_0204 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_0204 IPR035897 Thimo_0204 Thimo_0207 IPR025738 Aerotolerance-related protein BatD Thimo_0208 IPR007686 YutG/PgpA domain Thimo_0208 IPR026037 Phosphatidylglycerophosphatase A Thimo_0208 IPR036681 Thimo_0208 Thimo_0209 IPR006283 Thiamine-monophosphate kinase Thimo_0209 IPR010918 AIR synthase-related protein, C-terminal domain Thimo_0209 IPR016188 PurM, N-terminal-like Thimo_0209 IPR036676 Thimo_0209 Thimo_0209 IPR036921 Thimo_0209 Thimo_0210 IPR006027 NusB/RsmB/TIM44 Thimo_0210 IPR011605 NusB antitermination factor Thimo_0210 IPR035926 Thimo_0210 Thimo_0211 IPR002180 6,7-dimethyl-8-ribityllumazine synthase Thimo_0211 IPR034964 Thimo_0211 Thimo_0211 IPR036467 Thimo_0211 Thimo_0212 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB Thimo_0212 IPR017945 DHBP synthase RibB-like alpha/beta domain Thimo_0212 IPR032677 Thimo_0212 Thimo_0212 IPR036144 Thimo_0212 Thimo_0213 IPR001783 Lumazine-binding protein Thimo_0213 IPR017938 Riboflavin synthase-like beta-barrel Thimo_0213 IPR023366 ATP synthase subunit alpha-like domain Thimo_0213 IPR026017 Lumazine-binding domain Thimo_0215 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_0215 IPR036165 Thimo_0215 Thimo_0216 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_0216 IPR001646 Pentapeptide repeat Thimo_0216 IPR001680 WD40 repeat Thimo_0216 IPR007111 NACHT nucleoside triphosphatase Thimo_0216 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Thimo_0216 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_0216 IPR019775 WD40 repeat, conserved site Thimo_0216 IPR020472 G-protein beta WD-40 repeat Thimo_0216 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0216 IPR035897 Thimo_0216 Thimo_0216 IPR036322 Thimo_0216 Thimo_0217 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_0217 IPR035897 Thimo_0217 Thimo_0218 IPR001789 Signal transduction response regulator, receiver domain Thimo_0218 IPR001867 Signal transduction response regulator, C-terminal Thimo_0218 IPR011006 CheY-like superfamily Thimo_0218 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_0218 IPR036388 Thimo_0218 Thimo_0219 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0219 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0219 IPR036097 Thimo_0219 Thimo_0219 IPR036890 Thimo_0219 Thimo_0222 IPR002110 Ankyrin repeat Thimo_0222 IPR020683 Ankyrin repeat-containing domain Thimo_0222 IPR036770 Thimo_0222 Thimo_0223 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Thimo_0223 IPR010047 Ni-containing CO dehydrogenase Thimo_0223 IPR011254 Prismane-like Thimo_0223 IPR016099 Prismane-like, alpha/beta-sandwich Thimo_0223 IPR016101 CO dehydrogenase, alpha-bundle Thimo_0224 IPR001638 Extracellular solute-binding protein, family 3 Thimo_0224 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates Thimo_0225 IPR000515 MetI-like domain Thimo_0225 IPR035906 Thimo_0225 Thimo_0226 IPR003439 ABC transporter-like Thimo_0226 IPR003593 AAA+ ATPase domain Thimo_0226 IPR017871 ABC transporter, conserved site Thimo_0226 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0227 IPR011852 TRAP transporter solute receptor, TAXI family Thimo_0228 IPR013651 ATP-grasp fold, RimK-type Thimo_0228 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0229 IPR007202 4Fe-4S domain Thimo_0229 IPR010207 Electron transport complex, RnfB Thimo_0229 IPR011005 Dihydropteroate synthase-like Thimo_0229 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0229 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0230 IPR003667 Electron transport complex, Rnf/Nqr Thimo_0231 IPR003667 Electron transport complex, Rnf/Nqr Thimo_0232 IPR007329 FMN-binding Thimo_0232 IPR010209 Electron transport complex, RnfG Thimo_0233 IPR004338 NADH-quinone reductase NQR2/RnfD Thimo_0233 IPR011303 Electron transport complex, RnfD Thimo_0234 IPR009051 Alpha-helical ferredoxin Thimo_0234 IPR010208 Electron transport complex protein RnfC Thimo_0234 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Thimo_0234 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0234 IPR019554 Soluble ligand binding domain Thimo_0234 IPR026902 RnfC Barrel sandwich hybrid domain Thimo_0234 IPR037225 Thimo_0234 Thimo_0235 IPR003781 CoA-binding Thimo_0235 IPR016102 Succinyl-CoA synthetase-like Thimo_0235 IPR032875 Thimo_0235 Thimo_0235 IPR036291 Thimo_0235 Thimo_0235 IPR036969 Thimo_0235 Thimo_0236 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type Thimo_0236 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0236 IPR016102 Succinyl-CoA synthetase-like Thimo_0236 IPR032263 Thimo_0236 Thimo_0237 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Thimo_0237 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Thimo_0237 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 Thimo_0237 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 Thimo_0237 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal Thimo_0237 IPR026255 NAD(P) transhydrogenase, alpha subunit Thimo_0237 IPR036291 Thimo_0237 Thimo_0238 IPR012136 NADP transhydrogenase, beta subunit Thimo_0238 IPR029035 DHS-like NAD/FAD-binding domain Thimo_0238 IPR034300 Thimo_0238 Thimo_0239 IPR001236 Lactate/malate dehydrogenase, N-terminal Thimo_0239 IPR001557 L-lactate/malate dehydrogenase Thimo_0239 IPR010945 Malate dehydrogenase, type 2 Thimo_0239 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal Thimo_0239 IPR022383 Lactate/malate dehydrogenase, C-terminal Thimo_0239 IPR036291 Thimo_0239 Thimo_0240 IPR005000 HpcH/HpaI aldolase/citrate lyase domain Thimo_0240 IPR011206 Citrate lyase beta subunit-like Thimo_0240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_0241 IPR005809 Succinyl-CoA synthetase, beta subunit Thimo_0241 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Thimo_0241 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type Thimo_0241 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0241 IPR016102 Succinyl-CoA synthetase-like Thimo_0241 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site Thimo_0242 IPR003781 CoA-binding Thimo_0242 IPR005810 Succinyl-CoA ligase, alpha subunit Thimo_0242 IPR005811 ATP-citrate lyase/succinyl-CoA ligase Thimo_0242 IPR016102 Succinyl-CoA synthetase-like Thimo_0242 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Thimo_0242 IPR033847 Thimo_0242 Thimo_0242 IPR036291 Thimo_0242 Thimo_0243 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Thimo_0243 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Thimo_0243 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Thimo_0243 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Thimo_0243 IPR018136 Aconitase family, 4Fe-4S cluster binding site Thimo_0243 IPR036008 Thimo_0243 Thimo_0244 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric Thimo_0245 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thimo_0245 IPR009051 Alpha-helical ferredoxin Thimo_0245 IPR012675 Beta-grasp domain Thimo_0245 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0245 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0245 IPR036010 Thimo_0245 Thimo_0246 IPR003953 FAD binding domain Thimo_0246 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Thimo_0246 IPR036188 Thimo_0246 Thimo_0247 IPR009051 Alpha-helical ferredoxin Thimo_0247 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0247 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0248 IPR004017 Cysteine-rich domain Thimo_0249 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0249 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0250 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Thimo_0250 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_0250 IPR029061 Thiamin diphosphate-binding fold Thimo_0250 IPR033412 Thimo_0250 Thimo_0251 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thimo_0251 IPR029061 Thiamin diphosphate-binding fold Thimo_0252 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Thimo_0252 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Thimo_0253 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0253 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0253 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_0253 IPR036188 Thimo_0253 Thimo_0254 IPR003813 Methyl-viologen-reducing hydrogenase, delta subunit Thimo_0255 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Thimo_0255 IPR009051 Alpha-helical ferredoxin Thimo_0255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0256 IPR009051 Alpha-helical ferredoxin Thimo_0256 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0256 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0257 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thimo_0257 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase Thimo_0257 IPR001834 NADH:cytochrome b5 reductase (CBR) Thimo_0257 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Thimo_0257 IPR017938 Riboflavin synthase-like beta-barrel Thimo_0257 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Thimo_0257 IPR039261 Thimo_0257 Thimo_0258 IPR003251 Rubrerythrin Thimo_0258 IPR009078 Ferritin-like superfamily Thimo_0258 IPR012347 Ferritin-related Thimo_0259 IPR009078 Ferritin-like superfamily Thimo_0259 IPR012347 Ferritin-related Thimo_0261 IPR003713 Flagellar protein FliS Thimo_0261 IPR036584 Thimo_0261 Thimo_0262 IPR008622 Flagellar protein FliT Thimo_0263 IPR001029 Flagellin, D0/D1 domain Thimo_0263 IPR001492 Flagellin Thimo_0263 IPR010810 Flagellin hook, IN motif Thimo_0264 IPR005186 Flagellar protein FlaG protein Thimo_0264 IPR035924 Thimo_0264 Thimo_0265 IPR003481 Flagellar hook-associated protein 2, N-terminal Thimo_0265 IPR010809 Flagellar hook-associated 2, C-terminal Thimo_0267 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_0267 IPR002197 DNA binding HTH domain, Fis-type Thimo_0267 IPR003593 AAA+ ATPase domain Thimo_0267 IPR009057 Homeodomain-like Thimo_0267 IPR010518 Flagellar regulatory FleQ Thimo_0267 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_0267 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_0267 IPR025944 Sigma-54 interaction domain, conserved site Thimo_0267 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0268 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_0268 IPR002197 DNA binding HTH domain, Fis-type Thimo_0268 IPR003593 AAA+ ATPase domain Thimo_0268 IPR009057 Homeodomain-like Thimo_0268 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_0268 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_0268 IPR025944 Sigma-54 interaction domain, conserved site Thimo_0268 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0269 IPR001624 Flagellar hook-basal body complex protein FliE Thimo_0270 IPR000067 Flagellar M-ring protein FliF Thimo_0270 IPR006182 Secretory protein YscJ/FliF Thimo_0270 IPR013556 Flagellar M-ring C-terminal Thimo_0271 IPR000090 Flagellar motor switch protein FliG Thimo_0271 IPR011002 Flagellar motor switch protein FliG, alpha-helical Thimo_0271 IPR023087 Thimo_0271 Thimo_0271 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Thimo_0271 IPR032779 Thimo_0271 Thimo_0272 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Thimo_0273 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_0273 IPR003593 AAA+ ATPase domain Thimo_0273 IPR005714 ATPase, type III secretion system, FliI/YscN Thimo_0273 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_0273 IPR020005 Flagellar export ATPase FliI, clade 1 Thimo_0273 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0274 IPR012823 Flagellar export FliJ Thimo_0275 IPR021136 Flagellar hook-length control protein-like, C-terminal Thimo_0275 IPR038610 Thimo_0275 Thimo_0276 IPR005503 Flagellar basal body-associated protein FliL Thimo_0277 IPR001543 Surface presentation of antigen (SpoA) Thimo_0277 IPR001689 Flagellar motor switch protein FliM Thimo_0277 IPR028976 CheC-like domain Thimo_0277 IPR036429 Thimo_0277 Thimo_0278 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb Thimo_0278 IPR001543 Surface presentation of antigen (SpoA) Thimo_0278 IPR012826 Flagellar motor switch FliN Thimo_0278 IPR036429 Thimo_0278 Thimo_0279 IPR022781 Flagellar biosynthesis protein, FliO Thimo_0280 IPR005837 Flagellar transport protein FliP Thimo_0280 IPR005838 Type III secretion system inner membrane P protein Thimo_0281 IPR002191 Bacterial export protein family 3 Thimo_0281 IPR006305 Flagellar biosynthesis protein FliQ Thimo_0282 IPR002010 Type III secretion system inner membrane R protein Thimo_0282 IPR006303 Flagellar biosynthesis protein FliR Thimo_0283 IPR006135 Type III secretion system substrate exporter Thimo_0283 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB Thimo_0283 IPR029025 Type III secretion system substrate exporter, C-terminal Thimo_0284 IPR001712 Type III secretion system FHIPEP Thimo_0284 IPR006301 Flagellar biosynthesis protein FlhA Thimo_0285 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thimo_0285 IPR003593 AAA+ ATPase domain Thimo_0285 IPR020006 Signal-recognition particle (SRP)-type GTPase Thimo_0285 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0286 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0286 IPR025501 ATP binding protein MinD Thimo_0286 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0287 IPR000943 RNA polymerase sigma-70 Thimo_0287 IPR007627 RNA polymerase sigma-70 region 2 Thimo_0287 IPR007630 RNA polymerase sigma-70 region 4 Thimo_0287 IPR012845 RNA polymerase sigma factor, FliA/WhiG Thimo_0287 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_0287 IPR013325 RNA polymerase sigma factor, region 2 Thimo_0287 IPR014284 RNA polymerase sigma-70 like domain Thimo_0287 IPR028617 RNA polymerase sigma factor FliA Thimo_0288 IPR007730 Sporulation-related domain Thimo_0288 IPR036680 Thimo_0288 Thimo_0289 IPR007809 FlgN-like domain Thimo_0289 IPR036679 Thimo_0289 Thimo_0290 IPR007412 Anti-sigma-28 factor, FlgM Thimo_0290 IPR031316 Thimo_0290 Thimo_0290 IPR035890 Thimo_0290 Thimo_0291 IPR013974 SAF domain Thimo_0291 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Thimo_0293 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_0293 IPR025713 Motility protein B, N-terminal domain Thimo_0293 IPR036737 Thimo_0293 Thimo_0294 IPR000540 Flagellar motor protein MotA, conserved site Thimo_0294 IPR002898 MotA/TolQ/ExbB proton channel Thimo_0295 IPR024402 Domain of unknown function DUF2726 Thimo_0296 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal Thimo_0296 IPR006359 Transcription elongation factor GreA Thimo_0296 IPR018151 Transcription elongation factor, GreA/GreB, conserved site Thimo_0296 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal Thimo_0296 IPR023459 Transcription elongation factor GreA/GreB family Thimo_0296 IPR028624 Transcription elongation factor GreA/GreB Thimo_0296 IPR036805 Thimo_0296 Thimo_0296 IPR036953 Thimo_0296 Thimo_0297 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thimo_0297 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain Thimo_0297 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain Thimo_0297 IPR006275 Carbamoyl-phosphate synthase, large subunit Thimo_0297 IPR011607 Methylglyoxal synthase-like domain Thimo_0297 IPR016185 Pre-ATP-grasp domain Thimo_0297 IPR036897 Thimo_0297 Thimo_0297 IPR036914 Thimo_0297 Thimo_0298 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain Thimo_0298 IPR006274 Carbamoyl-phosphate synthase, small subunit Thimo_0298 IPR017926 Glutamine amidotransferase Thimo_0298 IPR029062 Class I glutamine amidotransferase-like Thimo_0298 IPR036480 Thimo_0298 Thimo_0299 IPR010791 Hydroxyneurosporene synthase Thimo_0299 IPR023374 AttH-like domain Thimo_0300 IPR003838 Permease FtsX-like Thimo_0300 IPR025857 MacB-like periplasmic core domain Thimo_0301 IPR003439 ABC transporter-like Thimo_0301 IPR003593 AAA+ ATPase domain Thimo_0301 IPR017871 ABC transporter, conserved site Thimo_0301 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0302 IPR019239 Protein of unknown function DUF2191 Thimo_0303 IPR002716 PIN domain Thimo_0303 IPR022907 VapC family Thimo_0303 IPR029060 PIN domain-like Thimo_0304 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thimo_0304 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Thimo_0304 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thimo_0304 IPR036291 Thimo_0304 Thimo_0305 IPR019267 CRISPR-associated protein Cas6 domain Thimo_0306 IPR008538 Domain of unknown function DUF820 Thimo_0306 IPR011335 Restriction endonuclease type II-like Thimo_0308 IPR002716 PIN domain Thimo_0308 IPR022907 VapC family Thimo_0308 IPR029060 PIN domain-like Thimo_0309 IPR007159 AbrB-like domain Thimo_0309 IPR037914 Thimo_0309 Thimo_0312 IPR003593 AAA+ ATPase domain Thimo_0312 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0313 IPR039444 Thimo_0313 Thimo_0314 IPR005537 Protein of unknown function, RAMP Thimo_0314 IPR010172 CRISPR-associated protein, TM1791 Thimo_0315 IPR010160 CRISPR-associated protein, Cmr5 Thimo_0315 IPR023101 AF1862-like domain Thimo_0316 IPR005537 Protein of unknown function, RAMP Thimo_0316 IPR013410 CRISPR-associated RAMP Cmr4 Thimo_0317 IPR019117 CRISPR-associated protein, Cmr3 Thimo_0318 IPR013407 CRISPR-associated protein Crm2 Thimo_0318 IPR024615 CRISPR-associated protein Crm2, N-terminal Thimo_0318 IPR038242 Thimo_0318 Thimo_0319 IPR007522 CRISPR-associated protein TM1795 Thimo_0320 IPR019092 CRISPR-assoc protein, NE0113/Csx13 Thimo_0324 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Thimo_0324 IPR021127 CRISPR associated protein Cas2 Thimo_0325 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Thimo_0325 IPR021127 CRISPR associated protein Cas2 Thimo_0326 IPR002729 CRISPR-associated protein Cas1 Thimo_0327 IPR000477 Reverse transcriptase domain Thimo_0328 IPR002686 Transposase IS200-like Thimo_0328 IPR036515 Thimo_0328 Thimo_0329 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_0329 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0329 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR Thimo_0329 IPR015803 Cysteine-tRNA ligase Thimo_0329 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase Thimo_0329 IPR032678 Thimo_0329 Thimo_0330 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Thimo_0330 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Thimo_0330 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Thimo_0330 IPR029000 Cyclophilin-like domain Thimo_0331 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Thimo_0331 IPR010138 UDP-2,3-diacylglucosamine hydrolase Thimo_0332 IPR001173 Glycosyltransferase 2-like Thimo_0332 IPR007267 GtrA-like protein Thimo_0332 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0333 IPR038731 Thimo_0333 Thimo_0334 IPR001650 Helicase, C-terminal Thimo_0334 IPR004589 DNA helicase, ATP-dependent, RecQ type Thimo_0334 IPR011545 DEAD/DEAH box helicase domain Thimo_0334 IPR012337 Ribonuclease H-like domain Thimo_0334 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_0334 IPR014017 DNA helicase, UvrD-like, C-terminal Thimo_0334 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0334 IPR036397 Thimo_0334 Thimo_0337 IPR021446 Thermoproteus tenax spherical virus 1, Orf18 Thimo_0338 IPR008278 4'-phosphopantetheinyl transferase superfamily Thimo_0338 IPR037143 Thimo_0338 Thimo_0339 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_0339 IPR006641 YqgF/RNase H-like domain Thimo_0339 IPR010994 RuvA domain 2-like Thimo_0339 IPR012337 Ribonuclease H-like domain Thimo_0339 IPR012340 Nucleic acid-binding, OB-fold Thimo_0339 IPR018974 Tex-like protein, N-terminal Thimo_0339 IPR022967 RNA-binding domain, S1 Thimo_0339 IPR023319 Tex-like protein, HTH domain Thimo_0339 IPR023323 Tex-like domain Thimo_0339 IPR032639 Thimo_0339 Thimo_0339 IPR037027 Thimo_0339 Thimo_0340 IPR021284 Protein of unknown function DUF2750 Thimo_0342 IPR001085 Serine hydroxymethyltransferase Thimo_0342 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_0342 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_0342 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_0342 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site Thimo_0342 IPR039429 Thimo_0342 Thimo_0343 IPR003796 Ribonucleotide reductase regulator NrdR-like Thimo_0343 IPR005144 ATP-cone Thimo_0344 IPR002125 CMP/dCMP deaminase, zinc-binding Thimo_0344 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Thimo_0344 IPR004794 Riboflavin biosynthesis protein RibD Thimo_0344 IPR011549 Riboflavin-specific deaminase, C-terminal Thimo_0344 IPR016192 APOBEC/CMP deaminase, zinc-binding Thimo_0344 IPR016193 Cytidine deaminase-like Thimo_0344 IPR024072 Dihydrofolate reductase-like domain Thimo_0345 IPR027379 Cardiolipin synthase N-terminal Thimo_0346 IPR001206 Diacylglycerol kinase, catalytic domain Thimo_0346 IPR016064 ATP-NAD kinase-like domain Thimo_0346 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Thimo_0347 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Thimo_0347 IPR029052 Metallo-dependent phosphatase-like Thimo_0350 IPR011033 PRC-barrel-like Thimo_0350 IPR027275 PRC-barrel domain Thimo_0352 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Thimo_0352 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0352 IPR007197 Radical SAM Thimo_0352 IPR010505 Molybdenum cofactor synthesis C-terminal Thimo_0352 IPR013483 Molybdenum cofactor biosynthesis protein A Thimo_0352 IPR013785 Aldolase-type TIM barrel Thimo_0353 IPR004147 UbiB domain Thimo_0353 IPR011009 Protein kinase-like domain Thimo_0355 IPR002585 Cytochrome d ubiquinol oxidase, subunit I Thimo_0356 IPR003317 Cytochrome d ubiquinol oxidase, subunit II Thimo_0358 IPR003439 ABC transporter-like Thimo_0358 IPR003593 AAA+ ATPase domain Thimo_0358 IPR011527 ABC transporter type 1, transmembrane domain Thimo_0358 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD Thimo_0358 IPR017871 ABC transporter, conserved site Thimo_0358 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0358 IPR036640 Thimo_0358 Thimo_0359 IPR003439 ABC transporter-like Thimo_0359 IPR003593 AAA+ ATPase domain Thimo_0359 IPR011527 ABC transporter type 1, transmembrane domain Thimo_0359 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC Thimo_0359 IPR017871 ABC transporter, conserved site Thimo_0359 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0359 IPR036640 Thimo_0359 Thimo_0360 IPR014966 FRG domain Thimo_0364 IPR000073 Alpha/beta hydrolase fold-1 Thimo_0364 IPR022742 Putative lysophospholipase Thimo_0364 IPR029058 Alpha/Beta hydrolase fold Thimo_0365 IPR000073 Alpha/beta hydrolase fold-1 Thimo_0365 IPR000639 Epoxide hydrolase-like Thimo_0365 IPR029058 Alpha/Beta hydrolase fold Thimo_0366 IPR001123 Lysine-type exporter protein (LYSE/YGGA) Thimo_0368 IPR001584 Integrase, catalytic core Thimo_0368 IPR009057 Homeodomain-like Thimo_0368 IPR012337 Ribonuclease H-like domain Thimo_0368 IPR036397 Thimo_0368 Thimo_0369 IPR002514 Transposase IS3/IS911family Thimo_0369 IPR009057 Homeodomain-like Thimo_0371 IPR002514 Transposase IS3/IS911family Thimo_0371 IPR009057 Homeodomain-like Thimo_0372 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Thimo_0372 IPR013651 ATP-grasp fold, RimK-type Thimo_0372 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0372 IPR023533 Ribosomal S6 modification enzyme RimK Thimo_0373 IPR000726 Glycoside hydrolase, family 19, catalytic Thimo_0373 IPR023346 Lysozyme-like domain Thimo_0374 IPR000014 PAS domain Thimo_0374 IPR001610 PAC motif Thimo_0374 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0374 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thimo_0374 IPR013656 PAS fold-4 Thimo_0374 IPR013767 PAS fold Thimo_0374 IPR035965 Thimo_0374 Thimo_0374 IPR036890 Thimo_0374 Thimo_0376 IPR011051 RmlC-like cupin domain Thimo_0376 IPR013096 Cupin 2, conserved barrel Thimo_0376 IPR014710 RmlC-like jelly roll fold Thimo_0377 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_0377 IPR003018 GAF domain Thimo_0377 IPR003593 AAA+ ATPase domain Thimo_0377 IPR009057 Homeodomain-like Thimo_0377 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_0377 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_0377 IPR025944 Sigma-54 interaction domain, conserved site Thimo_0377 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0377 IPR029016 GAF domain-like Thimo_0378 IPR002781 Transmembrane protein TauE like Thimo_0379 IPR003333 Mycolic acid cyclopropane synthase Thimo_0379 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0380 IPR002579 Peptide methionine sulphoxide reductase MrsB Thimo_0380 IPR011057 Mss4-like Thimo_0381 IPR001320 Ionotropic glutamate receptor Thimo_0381 IPR001638 Extracellular solute-binding protein, family 3 Thimo_0381 IPR013099 Two pore domain potassium channel domain Thimo_0381 IPR028325 Voltage-gated potassium channel Thimo_0382 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thimo_0382 IPR012000 Thiamine pyrophosphate enzyme, central domain Thimo_0382 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thimo_0382 IPR012846 Acetolactate synthase, large subunit, biosynthetic Thimo_0382 IPR029035 DHS-like NAD/FAD-binding domain Thimo_0382 IPR029061 Thiamin diphosphate-binding fold Thimo_0383 IPR004789 Acetolactate synthase, small subunit Thimo_0383 IPR019455 Acetolactate synthase, small subunit, C-terminal Thimo_0383 IPR027271 Thimo_0383 Thimo_0384 IPR000506 Acetohydroxy acid isomeroreductase C-terminal Thimo_0384 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_0384 IPR013023 Acetohydroxy acid isomeroreductase Thimo_0384 IPR013116 Acetohydroxy acid isomeroreductase, catalytic Thimo_0384 IPR014359 Ketol-acid reductoisomerase, gammaproteobacteria Thimo_0384 IPR036291 Thimo_0384 Thimo_0385 IPR005490 L,D-transpeptidase catalytic domain Thimo_0385 IPR038063 Thimo_0385 Thimo_0386 IPR022061 Protein of unknown function DUF3617 Thimo_0389 IPR000771 Ketose-bisphosphate aldolase, class-II Thimo_0389 IPR011008 Dimeric alpha-beta barrel Thimo_0389 IPR013097 Stress responsive alpha-beta barrel Thimo_0389 IPR013785 Aldolase-type TIM barrel Thimo_0390 IPR006439 HAD hydrolase, subfamily IA Thimo_0390 IPR023198 Phosphoglycolate phosphatase, domain 2 Thimo_0390 IPR023214 HAD-like domain Thimo_0390 IPR036412 Thimo_0390 Thimo_0391 IPR029151 Periplasmic sensor domain-like Thimo_0392 IPR002347 Glucose/ribitol dehydrogenase Thimo_0392 IPR036291 Thimo_0392 Thimo_0393 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_0393 IPR036165 Thimo_0393 Thimo_0394 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thimo_0394 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 Thimo_0394 IPR035093 Thimo_0394 Thimo_0395 IPR000182 GNAT domain Thimo_0395 IPR016181 Acyl-CoA N-acyltransferase Thimo_0400 IPR016181 Acyl-CoA N-acyltransferase Thimo_0402 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Thimo_0402 IPR013785 Aldolase-type TIM barrel Thimo_0403 IPR015102 Transcriptional regulator HTH-type, FeoC Thimo_0403 IPR036249 Thimo_0403 Thimo_0404 IPR000847 Transcription regulator HTH, LysR Thimo_0404 IPR005119 LysR, substrate-binding Thimo_0404 IPR036388 Thimo_0404 Thimo_0404 IPR036390 Thimo_0404 Thimo_0406 IPR011660 Rv0623-like transcription factor Thimo_0407 IPR002716 PIN domain Thimo_0407 IPR022907 VapC family Thimo_0407 IPR029060 PIN domain-like Thimo_0409 IPR000182 GNAT domain Thimo_0409 IPR016181 Acyl-CoA N-acyltransferase Thimo_0410 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Thimo_0411 IPR004960 Bacterial lipid A biosynthesis acyltransferase Thimo_0412 IPR007452 Protein of unknown function DUF490 Thimo_0413 IPR000184 Bacterial surface antigen (D15) Thimo_0413 IPR010827 Surface antigen variable number Thimo_0413 IPR035243 Thimo_0413 Thimo_0414 IPR006121 Heavy metal-associated domain, HMA Thimo_0414 IPR017969 Heavy-metal-associated, conserved site Thimo_0414 IPR036163 Thimo_0414 Thimo_0415 IPR003836 Glucokinase Thimo_0417 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_0417 IPR025526 DsrC-like domain Thimo_0418 IPR005900 6-phosphogluconolactonase, DevB-type Thimo_0418 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase Thimo_0418 IPR037171 Thimo_0418 Thimo_0419 IPR013482 Molybdenum cofactor guanylyltransferase Thimo_0419 IPR025877 MobA-like NTP transferase domain Thimo_0419 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0420 IPR000073 Alpha/beta hydrolase fold-1 Thimo_0420 IPR029058 Alpha/Beta hydrolase fold Thimo_0422 IPR011639 Restriction modification methylase Eco57I Thimo_0422 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0423 IPR000944 Transcription regulator Rrf2-like Thimo_0423 IPR036388 Thimo_0423 Thimo_0423 IPR036390 Thimo_0423 Thimo_0424 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_0424 IPR004556 Modification methylase HemK Thimo_0424 IPR007848 Methyltransferase small domain Thimo_0424 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase Thimo_0424 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0426 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN Thimo_0426 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0426 IPR007197 Radical SAM Thimo_0426 IPR010723 HemN, C-terminal domain Thimo_0426 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0427 IPR000873 AMP-dependent synthetase/ligase Thimo_0427 IPR020845 AMP-binding, conserved site Thimo_0427 IPR025110 AMP-binding enzyme C-terminal domain Thimo_0429 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Thimo_0429 IPR005215 Trigger factor Thimo_0429 IPR008880 Trigger factor, C-terminal domain Thimo_0429 IPR008881 Trigger factor, ribosome-binding, bacterial Thimo_0429 IPR027304 Trigger factor/SurA domain Thimo_0429 IPR036611 Thimo_0429 Thimo_0429 IPR037041 Thimo_0429 Thimo_0430 IPR001907 ATP-dependent Clp protease proteolytic subunit Thimo_0430 IPR018215 ClpP, active site Thimo_0430 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Thimo_0430 IPR029045 ClpP/crotonase-like domain Thimo_0430 IPR033135 Thimo_0430 Thimo_0431 IPR003593 AAA+ ATPase domain Thimo_0431 IPR003959 ATPase, AAA-type, core Thimo_0431 IPR004487 Clp protease, ATP-binding subunit ClpX Thimo_0431 IPR010603 Zinc finger, ClpX C4-type Thimo_0431 IPR019489 Clp ATPase, C-terminal Thimo_0431 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0431 IPR038366 Thimo_0431 Thimo_0432 IPR003111 Peptidase S16, lon N-terminal Thimo_0432 IPR003593 AAA+ ATPase domain Thimo_0432 IPR003959 ATPase, AAA-type, core Thimo_0432 IPR004815 Lon protease, bacterial/eukaryotic-type Thimo_0432 IPR008268 Peptidase S16, active site Thimo_0432 IPR008269 Peptidase S16, Lon C-terminal Thimo_0432 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_0432 IPR015947 PUA-like domain Thimo_0432 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0432 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0432 IPR027543 Lon protease, bacterial Thimo_0433 IPR000119 Histone-like bacterial DNA-binding protein Thimo_0433 IPR010992 Integration host factor (IHF)-like DNA-binding domain Thimo_0433 IPR020816 Histone-like DNA-binding protein, conserved site Thimo_0436 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thimo_0436 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thimo_0436 IPR027304 Trigger factor/SurA domain Thimo_0437 IPR002347 Glucose/ribitol dehydrogenase Thimo_0437 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Thimo_0437 IPR036291 Thimo_0437 Thimo_0438 IPR006089 Acyl-CoA dehydrogenase, conserved site Thimo_0438 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain Thimo_0438 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal Thimo_0438 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain Thimo_0438 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal Thimo_0438 IPR020964 Acyl-CoA dehydrogenase, C-terminal Thimo_0438 IPR036250 Thimo_0438 Thimo_0438 IPR036797 Thimo_0438 Thimo_0438 IPR037069 Thimo_0438 Thimo_0439 IPR001308 Electron transfer flavoprotein, alpha subunit Thimo_0439 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0439 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Thimo_0439 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Thimo_0439 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site Thimo_0439 IPR029035 DHS-like NAD/FAD-binding domain Thimo_0440 IPR012255 Electron transfer flavoprotein, beta subunit Thimo_0440 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Thimo_0441 IPR001969 Aspartic peptidase, active site Thimo_0441 IPR021109 Aspartic peptidase domain Thimo_0442 IPR010384 MtfA family Thimo_0442 IPR024079 Metallopeptidase, catalytic domain Thimo_0443 IPR003782 Copper chaperone SCO1/SenC Thimo_0443 IPR036249 Thimo_0443 Thimo_0444 IPR009056 Cytochrome c-like domain Thimo_0444 IPR024167 Cytochrome c4 Thimo_0444 IPR036909 Thimo_0444 Thimo_0445 IPR005135 Endonuclease/exonuclease/phosphatase Thimo_0445 IPR036691 Thimo_0445 Thimo_0447 IPR009495 Protein of unknown function DUF1109 Thimo_0448 IPR007627 RNA polymerase sigma-70 region 2 Thimo_0448 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Thimo_0448 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_0448 IPR013325 RNA polymerase sigma factor, region 2 Thimo_0448 IPR014284 RNA polymerase sigma-70 like domain Thimo_0448 IPR036388 Thimo_0448 Thimo_0450 IPR002569 Peptide methionine sulphoxide reductase MsrA Thimo_0450 IPR036509 Thimo_0450 Thimo_0451 IPR011460 Protein of unknown function DUF1566 Thimo_0452 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Thimo_0452 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative Thimo_0452 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain Thimo_0452 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Thimo_0452 IPR013760 DNA topoisomerase, type IIA-like domain Thimo_0452 IPR035516 Thimo_0452 Thimo_0453 IPR001602 Uncharacterised protein family UPF0047 Thimo_0453 IPR035917 Thimo_0453 Thimo_0455 IPR001667 DDH domain Thimo_0455 IPR003156 DHHA1 domain Thimo_0455 IPR004610 Bacterial RecJ exonuclease Thimo_0455 IPR038763 Thimo_0455 Thimo_0457 IPR025427 Protein of unknown function DUF4160 Thimo_0458 IPR018841 Protein of unknown function DUF2442 Thimo_0458 IPR036782 Thimo_0458 Thimo_0459 IPR000477 Reverse transcriptase domain Thimo_0459 IPR030931 Thimo_0459 Thimo_0460 IPR009056 Cytochrome c-like domain Thimo_0460 IPR036909 Thimo_0460 Thimo_0462 IPR008538 Domain of unknown function DUF820 Thimo_0462 IPR011335 Restriction endonuclease type II-like Thimo_0463 IPR006839 Ribosome-associated, YjgA Thimo_0463 IPR023153 PSPTO4464-like domain Thimo_0464 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Thimo_0464 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit Thimo_0464 IPR034804 Thimo_0464 Thimo_0465 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit Thimo_0465 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor Thimo_0465 IPR034804 Thimo_0465 Thimo_0466 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site Thimo_0466 IPR003953 FAD binding domain Thimo_0466 IPR011281 Succinate dehydrogenase, flavoprotein subunit Thimo_0466 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Thimo_0466 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thimo_0466 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Thimo_0466 IPR036188 Thimo_0466 Thimo_0466 IPR037099 Thimo_0466 Thimo_0467 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein Thimo_0467 IPR009051 Alpha-helical ferredoxin Thimo_0467 IPR012675 Beta-grasp domain Thimo_0467 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0467 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal Thimo_0467 IPR036010 Thimo_0467 Thimo_0468 IPR005631 Flavinator of succinate dehydrogenase Thimo_0468 IPR036714 Thimo_0468 Thimo_0469 IPR000551 MerR-type HTH domain Thimo_0469 IPR009061 DNA binding domain, putative Thimo_0471 IPR012830 Citrate utilization protein B Thimo_0471 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0471 IPR036197 Thimo_0471 Thimo_0472 IPR003953 FAD binding domain Thimo_0472 IPR012831 Precorrin 3B synthase CobZ Thimo_0472 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Thimo_0472 IPR036188 Thimo_0472 Thimo_0473 IPR004459 Cobyric acid synthase CobQ Thimo_0473 IPR011698 CobB/CobQ-like glutamine amidotransferase Thimo_0473 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0473 IPR029062 Class I glutamine amidotransferase-like Thimo_0477 IPR001584 Integrase, catalytic core Thimo_0477 IPR012337 Ribonuclease H-like domain Thimo_0477 IPR025948 HTH-like domain Thimo_0477 IPR036397 Thimo_0477 Thimo_0478 IPR010921 Trp repressor/replication initiator Thimo_0479 IPR002935 O-methyltransferase, family 3 Thimo_0479 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0481 IPR018170 Aldo/keto reductase, conserved site Thimo_0481 IPR020471 Aldo/keto reductase subgroup Thimo_0481 IPR023210 NADP-dependent oxidoreductase domain Thimo_0481 IPR036812 Thimo_0481 Thimo_0484 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0484 IPR004459 Cobyric acid synthase CobQ Thimo_0484 IPR011698 CobB/CobQ-like glutamine amidotransferase Thimo_0484 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0484 IPR029062 Class I glutamine amidotransferase-like Thimo_0485 IPR000835 MarR-type HTH domain Thimo_0485 IPR036388 Thimo_0485 Thimo_0485 IPR036390 Thimo_0485 Thimo_0486 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein Thimo_0487 IPR012451 Protein of unknown function DUF1656 Thimo_0488 IPR006143 RND efflux pump, membrane fusion protein Thimo_0488 IPR039562 Thimo_0488 Thimo_0490 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Thimo_0490 IPR004361 Glyoxalase I Thimo_0490 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thimo_0492 IPR003689 Zinc/iron permease Thimo_0493 IPR006158 Cobalamin (vitamin B12)-binding domain Thimo_0493 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0493 IPR007197 Radical SAM Thimo_0493 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0494 IPR007212 Cysteine-rich small domain Thimo_0495 IPR000489 Pterin-binding Thimo_0495 IPR003726 Homocysteine S-methyltransferase Thimo_0495 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Thimo_0495 IPR004223 Vitamin B12-dependent methionine synthase, activation domain Thimo_0495 IPR006158 Cobalamin (vitamin B12)-binding domain Thimo_0495 IPR011005 Dihydropteroate synthase-like Thimo_0495 IPR011822 Cobalamin-dependent methionine synthase Thimo_0495 IPR036589 Thimo_0495 Thimo_0495 IPR036594 Thimo_0495 Thimo_0495 IPR036724 Thimo_0495 Thimo_0495 IPR037010 Thimo_0495 Thimo_0498 IPR011717 Tetratricopeptide TPR-4 Thimo_0498 IPR011990 Tetratricopeptide-like helical domain Thimo_0498 IPR019734 Tetratricopeptide repeat Thimo_0499 IPR008538 Domain of unknown function DUF820 Thimo_0499 IPR011335 Restriction endonuclease type II-like Thimo_0500 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0500 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA Thimo_0500 IPR011698 CobB/CobQ-like glutamine amidotransferase Thimo_0500 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0500 IPR029062 Class I glutamine amidotransferase-like Thimo_0501 IPR004485 Cobalamin biosynthesis CobD/CbiB Thimo_0502 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase Thimo_0502 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0503 IPR000878 Tetrapyrrole methylase Thimo_0503 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase Thimo_0503 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_0503 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_0503 IPR035996 Thimo_0503 Thimo_0504 IPR005495 Permease YjgP/YjgQ, predicted Thimo_0504 IPR030922 Thimo_0504 Thimo_0507 IPR005240 Protein of unknown function DUF389 Thimo_0508 IPR016195 Polymerase/histidinol phosphatase-like Thimo_0509 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thimo_0509 IPR036641 Thimo_0509 Thimo_0510 IPR001789 Signal transduction response regulator, receiver domain Thimo_0510 IPR011006 CheY-like superfamily Thimo_0511 IPR002575 Aminoglycoside phosphotransferase Thimo_0511 IPR011009 Protein kinase-like domain Thimo_0512 IPR002541 Cytochrome c assembly protein Thimo_0513 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thimo_0513 IPR003593 AAA+ ATPase domain Thimo_0513 IPR004125 Signal recognition particle, SRP54 subunit, M-domain Thimo_0513 IPR004780 Signal recognition particle protein Ffh Thimo_0513 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle Thimo_0513 IPR022941 Signal recognition particle, SRP54 subunit Thimo_0513 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0513 IPR036891 Thimo_0513 Thimo_0515 IPR000160 GGDEF domain Thimo_0515 IPR000644 CBS domain Thimo_0515 IPR001633 EAL domain Thimo_0515 IPR029787 Nucleotide cyclase Thimo_0515 IPR035919 Thimo_0515 Thimo_0517 IPR004821 Cytidyltransferase-like domain Thimo_0517 IPR011611 Carbohydrate kinase PfkB Thimo_0517 IPR011913 RfaE bifunctional protein, domain I Thimo_0517 IPR011914 RfaE bifunctional protein, domain II Thimo_0517 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0517 IPR023030 Bifunctional protein HldE Thimo_0517 IPR029056 Ribokinase-like Thimo_0518 IPR001347 Sugar isomerase (SIS) Thimo_0518 IPR004515 Phosphoheptose isomerase Thimo_0522 IPR025427 Protein of unknown function DUF4160 Thimo_0523 IPR018841 Protein of unknown function DUF2442 Thimo_0523 IPR036782 Thimo_0523 Thimo_0526 IPR006158 Cobalamin (vitamin B12)-binding domain Thimo_0526 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0526 IPR007197 Radical SAM Thimo_0526 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0526 IPR036724 Thimo_0526 Thimo_0527 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0527 IPR007197 Radical SAM Thimo_0527 IPR013785 Aldolase-type TIM barrel Thimo_0527 IPR023885 4Fe4S-binding SPASM domain Thimo_0529 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0530 IPR017867 Protein-tyrosine phosphatase, low molecular weight Thimo_0530 IPR023485 Phosphotyrosine protein phosphatase I superfamily Thimo_0530 IPR036196 Thimo_0530 Thimo_0531 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_0531 IPR004659 Ribonuclease E/G Thimo_0531 IPR012340 Nucleic acid-binding, OB-fold Thimo_0531 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Thimo_0531 IPR022967 RNA-binding domain, S1 Thimo_0531 IPR028878 Ribonuclease E Thimo_0532 IPR002942 RNA-binding S4 domain Thimo_0532 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Thimo_0532 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Thimo_0532 IPR006225 Pseudouridine synthase, RluC/RluD Thimo_0532 IPR020103 Pseudouridine synthase, catalytic domain Thimo_0532 IPR036986 Thimo_0532 Thimo_0533 IPR006439 HAD hydrolase, subfamily IA Thimo_0533 IPR023198 Phosphoglycolate phosphatase, domain 2 Thimo_0533 IPR023214 HAD-like domain Thimo_0533 IPR036412 Thimo_0533 Thimo_0534 IPR002142 Peptidase S49 Thimo_0534 IPR029045 ClpP/crotonase-like domain Thimo_0535 IPR008258 Lytic transglycosylase-like SLT domain Thimo_0535 IPR018392 LysM domain Thimo_0535 IPR023346 Lysozyme-like domain Thimo_0535 IPR036779 Thimo_0535 Thimo_0536 IPR003697 Maf-like protein Thimo_0536 IPR029001 Inosine triphosphate pyrophosphatase-like Thimo_0537 IPR023198 Phosphoglycolate phosphatase, domain 2 Thimo_0537 IPR023214 HAD-like domain Thimo_0537 IPR036412 Thimo_0537 Thimo_0538 IPR039562 Thimo_0538 Thimo_0539 IPR001036 Acriflavin resistance protein Thimo_0539 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_0540 IPR001789 Signal transduction response regulator, receiver domain Thimo_0540 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0540 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0540 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0540 IPR011006 CheY-like superfamily Thimo_0540 IPR036097 Thimo_0540 Thimo_0540 IPR036890 Thimo_0540 Thimo_0541 IPR007296 Domain of unknown function DUF403 Thimo_0542 IPR016450 Uncharacterised conserved protein UCP005522 Thimo_0542 IPR025841 Circularly permuted ATP-grasp type 2 Thimo_0543 IPR002931 Transglutaminase-like Thimo_0543 IPR013589 Bacterial transglutaminase-like, N-terminal Thimo_0543 IPR018667 Domain of unknown function DUF2126 Thimo_0543 IPR038765 Thimo_0543 Thimo_0544 IPR000962 Zinc finger, DksA/TraR C4-type Thimo_0544 IPR012784 RNA polymerase-binding transcription factor DksA Thimo_0544 IPR037187 Thimo_0544 Thimo_0545 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_0545 IPR025526 DsrC-like domain Thimo_0547 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_0547 IPR036165 Thimo_0547 Thimo_0548 IPR002716 PIN domain Thimo_0548 IPR029060 PIN domain-like Thimo_0552 IPR000943 RNA polymerase sigma-70 Thimo_0552 IPR007127 RNA polymerase sigma factor 70, region 1.1 Thimo_0552 IPR007624 RNA polymerase sigma-70 region 3 Thimo_0552 IPR007627 RNA polymerase sigma-70 region 2 Thimo_0552 IPR007630 RNA polymerase sigma-70 region 4 Thimo_0552 IPR007631 RNA polymerase sigma factor 70, non-essential domain Thimo_0552 IPR009042 RNA polymerase sigma-70 region 1.2 Thimo_0552 IPR012760 RNA polymerase sigma factor RpoD, C-terminal Thimo_0552 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_0552 IPR013325 RNA polymerase sigma factor, region 2 Thimo_0552 IPR014284 RNA polymerase sigma-70 like domain Thimo_0552 IPR028630 RNA polymerase sigma factor RpoD Thimo_0552 IPR036388 Thimo_0552 Thimo_0553 IPR002694 Zinc finger, CHC2-type Thimo_0553 IPR006171 Toprim domain Thimo_0553 IPR006295 DNA primase, DnaG Thimo_0553 IPR013173 DNA primase DnaG, DnaB-binding domain Thimo_0553 IPR013264 DNA primase, catalytic core, N-terminal Thimo_0553 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thimo_0553 IPR019475 DNA primase, DnaB-helicase binding domain Thimo_0553 IPR030846 Thimo_0553 Thimo_0553 IPR036977 Thimo_0553 Thimo_0553 IPR037068 Thimo_0553 Thimo_0554 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related Thimo_0554 IPR019004 Uncharacterised domain YOR215C, mitochondrial Thimo_0554 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Thimo_0555 IPR001911 Ribosomal protein S21 Thimo_0555 IPR038380 Thimo_0555 Thimo_0556 IPR001584 Integrase, catalytic core Thimo_0556 IPR012337 Ribonuclease H-like domain Thimo_0557 IPR000905 Gcp-like domain Thimo_0557 IPR017860 Peptidase M22, conserved site Thimo_0557 IPR017861 Kae1/YgjD family Thimo_0557 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD Thimo_0558 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY Thimo_0559 IPR006156 Dihydroneopterin aldolase Thimo_0559 IPR006157 Dihydroneopterin aldolase/epimerase domain Thimo_0560 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Thimo_0560 IPR035907 Thimo_0560 Thimo_0561 IPR019534 Protein of unknown function DUF2452 Thimo_0562 IPR002347 Glucose/ribitol dehydrogenase Thimo_0562 IPR036291 Thimo_0562 Thimo_0563 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Thimo_0563 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0563 IPR038375 Thimo_0563 Thimo_0565 IPR001584 Integrase, catalytic core Thimo_0565 IPR012337 Ribonuclease H-like domain Thimo_0566 IPR002781 Transmembrane protein TauE like Thimo_0569 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_0569 IPR036188 Thimo_0569 Thimo_0570 IPR006683 Thioesterase superfamily Thimo_0570 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family Thimo_0570 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase Thimo_0570 IPR029069 HotDog domain Thimo_0571 IPR002898 MotA/TolQ/ExbB proton channel Thimo_0571 IPR014163 Tol-Pal system, TolQ Thimo_0572 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_0572 IPR014168 Biopolymer transport, TolR Thimo_0573 IPR006260 TonB, C-terminal Thimo_0573 IPR014161 Tol-Pal system, TolA Thimo_0574 IPR007195 TolB, N-terminal Thimo_0574 IPR011042 Six-bladed beta-propeller, TolB-like Thimo_0574 IPR011659 WD40-like Beta Propeller Thimo_0574 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB Thimo_0574 IPR036752 Thimo_0574 Thimo_0575 IPR006664 Outer membrane protein, bacterial Thimo_0575 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_0575 IPR014169 Peptidoglycan-associated lipoprotein Thimo_0575 IPR036737 Thimo_0575 Thimo_0575 IPR039001 Thimo_0575 Thimo_0576 IPR011990 Tetratricopeptide-like helical domain Thimo_0576 IPR014162 Tol-Pal system, YbgF Thimo_0576 IPR032519 Thimo_0576 Thimo_0576 IPR034706 Thimo_0576 Thimo_0576 IPR039565 Thimo_0576 Thimo_0577 IPR007197 Radical SAM Thimo_0577 IPR013785 Aldolase-type TIM barrel Thimo_0577 IPR024924 7-carboxy-7-deazaguanine synthase-like Thimo_0577 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE Thimo_0578 IPR007361 Protein of unknown function DUF427 Thimo_0579 IPR010342 Protein of unknown function DUF938 Thimo_0579 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0581 IPR000037 SsrA-binding protein Thimo_0581 IPR020081 SsrA-binding protein, conserved site Thimo_0581 IPR023620 Small protein B Thimo_0582 IPR000652 Triosephosphate isomerase Thimo_0582 IPR013785 Aldolase-type TIM barrel Thimo_0582 IPR020861 Triosephosphate isomerase, active site Thimo_0582 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic Thimo_0582 IPR035990 Thimo_0582 Thimo_0583 IPR004692 Preprotein translocase SecG subunit Thimo_0585 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Thimo_0585 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid Thimo_0585 IPR038430 Thimo_0585 Thimo_0586 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_0586 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thimo_0587 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thimo_0587 IPR010218 NADH dehydrogenase, subunit C Thimo_0587 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site Thimo_0587 IPR037232 Thimo_0587 Thimo_0588 IPR001135 NADH-quinone oxidoreductase, subunit D Thimo_0588 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thimo_0588 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H Thimo_0588 IPR029014 NiFe hydrogenase-like Thimo_0588 IPR038290 Thimo_0588 Thimo_0589 IPR002023 NADH-quinone oxidoreductase subunit E-like Thimo_0589 IPR036249 Thimo_0589 Thimo_0590 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Thimo_0590 IPR011537 NADH ubiquinone oxidoreductase, F subunit Thimo_0590 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Thimo_0590 IPR019554 Soluble ligand binding domain Thimo_0590 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding Thimo_0590 IPR037207 Thimo_0590 Thimo_0590 IPR037225 Thimo_0590 Thimo_0591 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Thimo_0591 IPR006656 Molybdopterin oxidoreductase Thimo_0591 IPR006657 Molydopterin dinucleotide-binding domain Thimo_0591 IPR009010 Aspartate decarboxylase-like domain Thimo_0591 IPR010228 NADH:ubiquinone oxidoreductase, subunit G Thimo_0591 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Thimo_0591 IPR036010 Thimo_0591 Thimo_0592 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thimo_0592 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site Thimo_0593 IPR010226 NADH-quinone oxidoreductase, chain I Thimo_0593 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0593 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0594 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 Thimo_0595 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K Thimo_0595 IPR039428 Thimo_0595 Thimo_0596 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Thimo_0596 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_0596 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 Thimo_0596 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup Thimo_0597 IPR000260 NADH:ubiquinone oxidoreductase, chain 4, N-terminal Thimo_0597 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_0597 IPR003918 NADH:ubiquinone oxidoreductase Thimo_0597 IPR010227 NADH-quinone oxidoreductase, chain M/4 Thimo_0598 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_0598 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 Thimo_0599 IPR008538 Domain of unknown function DUF820 Thimo_0599 IPR011335 Restriction endonuclease type II-like Thimo_0600 IPR011635 APHP Thimo_0601 IPR002636 Ralstonia phage RSS1, Orf11 Thimo_0602 IPR005654 ATPase, AFG1-like Thimo_0602 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0604 IPR009057 Homeodomain-like Thimo_0604 IPR018060 DNA binding HTH domain, AraC-type Thimo_0604 IPR018062 HTH domain AraC-type, conserved site Thimo_0604 IPR032687 Thimo_0604 Thimo_0605 IPR006558 LamG-like jellyroll fold Thimo_0605 IPR013320 Concanavalin A-like lectin/glucanase, subgroup Thimo_0605 IPR013783 Immunoglobulin-like fold Thimo_0605 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_0605 IPR022409 PKD/Chitinase domain Thimo_0605 IPR032109 Thimo_0605 Thimo_0605 IPR035986 Thimo_0605 Thimo_0607 IPR011460 Protein of unknown function DUF1566 Thimo_0608 IPR036457 Thimo_0608 Thimo_0609 IPR002035 von Willebrand factor, type A Thimo_0609 IPR036465 Thimo_0609 Thimo_0610 IPR000719 Protein kinase domain Thimo_0610 IPR011009 Protein kinase-like domain Thimo_0611 IPR008538 Domain of unknown function DUF820 Thimo_0611 IPR011335 Restriction endonuclease type II-like Thimo_0612 IPR003753 Exonuclease VII, large subunit Thimo_0612 IPR020579 Exonuclease VII, large subunit, C-terminal Thimo_0612 IPR025824 OB-fold nucleic acid binding domain Thimo_0613 IPR000847 Transcription regulator HTH, LysR Thimo_0613 IPR004606 Molybdenum-pterin binding Thimo_0613 IPR005116 Transport-associated OB, type 1 Thimo_0613 IPR008995 Molybdate/tungstate binding, C-terminal Thimo_0613 IPR016462 Molybdate-dependent transcriptional regulator, ModE Thimo_0613 IPR036388 Thimo_0613 Thimo_0613 IPR036390 Thimo_0613 Thimo_0614 IPR005950 Molybdenum ABC transporter, periplasmic binding protein Thimo_0615 IPR000515 MetI-like domain Thimo_0615 IPR011867 Molybdate ABC transporter, permease protein Thimo_0615 IPR035906 Thimo_0615 Thimo_0616 IPR003439 ABC transporter-like Thimo_0616 IPR003593 AAA+ ATPase domain Thimo_0616 IPR005116 Transport-associated OB, type 1 Thimo_0616 IPR008995 Molybdate/tungstate binding, C-terminal Thimo_0616 IPR011868 Molybdate ABC transporter, ATP-binding protein Thimo_0616 IPR017871 ABC transporter, conserved site Thimo_0616 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0617 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Thimo_0617 IPR006242 Putative pyrophosphorylase ModD Thimo_0617 IPR013785 Aldolase-type TIM barrel Thimo_0617 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Thimo_0617 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Thimo_0617 IPR036068 Thimo_0617 Thimo_0617 IPR037128 Thimo_0617 Thimo_0618 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase Thimo_0618 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Thimo_0618 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Thimo_0618 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site Thimo_0618 IPR036291 Thimo_0618 Thimo_0623 IPR001633 EAL domain Thimo_0623 IPR001789 Signal transduction response regulator, receiver domain Thimo_0623 IPR011006 CheY-like superfamily Thimo_0623 IPR035919 Thimo_0623 Thimo_0624 IPR000014 PAS domain Thimo_0624 IPR001610 PAC motif Thimo_0624 IPR001789 Signal transduction response regulator, receiver domain Thimo_0624 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0624 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0624 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0624 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thimo_0624 IPR011006 CheY-like superfamily Thimo_0624 IPR013656 PAS fold-4 Thimo_0624 IPR013767 PAS fold Thimo_0624 IPR035965 Thimo_0624 Thimo_0624 IPR036097 Thimo_0624 Thimo_0624 IPR036641 Thimo_0624 Thimo_0624 IPR036890 Thimo_0624 Thimo_0625 IPR000160 GGDEF domain Thimo_0625 IPR029787 Nucleotide cyclase Thimo_0626 IPR005490 L,D-transpeptidase catalytic domain Thimo_0626 IPR038063 Thimo_0626 Thimo_0627 IPR023346 Lysozyme-like domain Thimo_0630 IPR009875 PilZ domain Thimo_0631 IPR004681 TRAP transporter permease protein Thimo_0631 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Thimo_0632 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component Thimo_0633 IPR021357 Protein of unknown function DUF2782 Thimo_0634 IPR003838 Permease FtsX-like Thimo_0635 IPR003838 Permease FtsX-like Thimo_0636 IPR003439 ABC transporter-like Thimo_0636 IPR003593 AAA+ ATPase domain Thimo_0636 IPR017871 ABC transporter, conserved site Thimo_0636 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0637 IPR006143 RND efflux pump, membrane fusion protein Thimo_0637 IPR032317 Thimo_0637 Thimo_0642 IPR012902 Prokaryotic N-terminal methylation site Thimo_0643 IPR012902 Prokaryotic N-terminal methylation site Thimo_0645 IPR012902 Prokaryotic N-terminal methylation site Thimo_0648 IPR001482 Type II secretion system protein E Thimo_0648 IPR003593 AAA+ ATPase domain Thimo_0648 IPR006321 Pilus retraction protein PilT Thimo_0648 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0649 IPR001482 Type II secretion system protein E Thimo_0649 IPR003593 AAA+ ATPase domain Thimo_0649 IPR007831 General secretory system II, protein E, N-terminal Thimo_0649 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0649 IPR037257 Thimo_0649 Thimo_0650 IPR001992 Type II secretion system conserved site Thimo_0650 IPR003004 GspF/PilC family Thimo_0650 IPR018076 Type II secretion system F domain Thimo_0652 IPR001775 GspD/PilQ family Thimo_0652 IPR004846 Type II/III secretion system Thimo_0652 IPR021844 Integrating conjugative element protein, PFL4704 Thimo_0654 IPR000189 Prokaryotic transglycosylase, active site Thimo_0654 IPR006597 Sel1-like Thimo_0654 IPR008258 Lytic transglycosylase-like SLT domain Thimo_0654 IPR011990 Tetratricopeptide-like helical domain Thimo_0654 IPR023346 Lysozyme-like domain Thimo_0655 IPR007329 FMN-binding Thimo_0655 IPR010209 Electron transport complex, RnfG Thimo_0656 IPR018976 Thimo_0656 Thimo_0656 IPR038352 Thimo_0656 Thimo_0657 IPR004923 Iron permease FTR1/Fip1/EfeU Thimo_0658 IPR002931 Transglutaminase-like Thimo_0658 IPR021878 Protein of unknown function DUF3488 Thimo_0658 IPR025403 Domain of unknown function DUF4129 Thimo_0658 IPR038765 Thimo_0658 Thimo_0659 IPR002881 Domain of unknown function DUF58 Thimo_0660 IPR011703 ATPase, AAA-3 Thimo_0660 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0661 IPR010538 Protein of unknown function DUF1111 Thimo_0661 IPR036909 Thimo_0661 Thimo_0662 IPR018976 Thimo_0662 Thimo_0662 IPR038352 Thimo_0662 Thimo_0664 IPR006175 YjgF/Yer057p/UK114 family Thimo_0664 IPR035959 Thimo_0664 Thimo_0665 IPR001789 Signal transduction response regulator, receiver domain Thimo_0665 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0665 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0665 IPR011006 CheY-like superfamily Thimo_0665 IPR036097 Thimo_0665 Thimo_0665 IPR036890 Thimo_0665 Thimo_0666 IPR006082 Phosphoribulokinase Thimo_0666 IPR006083 Phosphoribulokinase/uridine kinase Thimo_0666 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0667 IPR000644 CBS domain Thimo_0667 IPR005170 Transporter-associated domain Thimo_0667 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_0667 IPR036318 Thimo_0667 Thimo_0668 IPR002036 Endoribonuclease YbeY Thimo_0668 IPR020549 Endoribonuclease YbeY, conserved site Thimo_0668 IPR023091 Metalloprotease catalytic domain, predicted Thimo_0669 IPR003714 PhoH-like protein Thimo_0669 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0670 IPR002792 TRAM domain Thimo_0670 IPR005839 Methylthiotransferase Thimo_0670 IPR006463 tRNA-i(6)A37 modification enzyme MiaB Thimo_0670 IPR006638 Elongator protein 3/MiaB/NifB Thimo_0670 IPR007197 Radical SAM Thimo_0670 IPR013848 Methylthiotransferase, N-terminal Thimo_0670 IPR020612 Methylthiotransferase, conserved site Thimo_0670 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_0670 IPR038135 Thimo_0670 Thimo_0673 IPR017926 Glutamine amidotransferase Thimo_0673 IPR029062 Class I glutamine amidotransferase-like Thimo_0674 IPR000565 DNA topoisomerase, type IIA, subunit B Thimo_0674 IPR001241 DNA topoisomerase, type IIA Thimo_0674 IPR002288 DNA gyrase B subunit, C-terminal Thimo_0674 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0674 IPR006171 Toprim domain Thimo_0674 IPR011557 DNA gyrase, subunit B Thimo_0674 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Thimo_0674 IPR013759 DNA topoisomerase, type IIA, central domain Thimo_0674 IPR013760 DNA topoisomerase, type IIA-like domain Thimo_0674 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_0674 IPR018522 DNA topoisomerase, type IIA, conserved site Thimo_0674 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0674 IPR036890 Thimo_0674 Thimo_0675 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0675 IPR033186 Thimo_0675 Thimo_0677 IPR001650 Helicase, C-terminal Thimo_0677 IPR011545 DEAD/DEAH box helicase domain Thimo_0677 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_0677 IPR018973 DEAD/DEAH-box helicase, putative Thimo_0677 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0678 IPR012337 Ribonuclease H-like domain Thimo_0678 IPR038720 Thimo_0678 Thimo_0680 IPR001017 Dehydrogenase, E1 component Thimo_0680 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_0680 IPR011603 2-oxoglutarate dehydrogenase E1 component Thimo_0680 IPR029061 Thiamin diphosphate-binding fold Thimo_0680 IPR031717 Thimo_0680 Thimo_0680 IPR032106 Thimo_0680 Thimo_0681 IPR000089 Biotin/lipoyl attachment Thimo_0681 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Thimo_0681 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thimo_0681 IPR004167 E3 binding Thimo_0681 IPR006255 Dihydrolipoamide succinyltransferase Thimo_0681 IPR011053 Single hybrid motif Thimo_0681 IPR023213 Chloramphenicol acetyltransferase-like domain Thimo_0681 IPR036625 Thimo_0681 Thimo_0684 IPR003033 SCP2 sterol-binding domain Thimo_0684 IPR036527 Thimo_0684 Thimo_0685 IPR003695 Ppx/GppA phosphatase Thimo_0685 IPR030673 Thimo_0685 Thimo_0687 IPR002838 Mitochondrial biogenesis protein AIM24 Thimo_0687 IPR003325 TerD domain Thimo_0687 IPR016031 Tryptophan RNA-binding attenuator protein-like domain Thimo_0687 IPR036983 Thimo_0687 Thimo_0688 IPR002838 Mitochondrial biogenesis protein AIM24 Thimo_0688 IPR016031 Tryptophan RNA-binding attenuator protein-like domain Thimo_0688 IPR036983 Thimo_0688 Thimo_0689 IPR001482 Type II secretion system protein E Thimo_0689 IPR003593 AAA+ ATPase domain Thimo_0689 IPR006321 Pilus retraction protein PilT Thimo_0689 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0690 IPR001482 Type II secretion system protein E Thimo_0690 IPR003593 AAA+ ATPase domain Thimo_0690 IPR006321 Pilus retraction protein PilT Thimo_0690 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0691 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain Thimo_0691 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE Thimo_0691 IPR033747 Thimo_0691 Thimo_0691 IPR035893 Thimo_0691 Thimo_0692 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Thimo_0692 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit Thimo_0692 IPR011054 Rudiment single hybrid motif Thimo_0692 IPR013815 ATP-grasp fold, subdomain 1 Thimo_0692 IPR016185 Pre-ATP-grasp domain Thimo_0693 IPR001082 Fimbrial protein pilin Thimo_0693 IPR012902 Prokaryotic N-terminal methylation site Thimo_0694 IPR002035 von Willebrand factor, type A Thimo_0694 IPR011392 Tellurite resistance, TerY Thimo_0694 IPR036465 Thimo_0694 Thimo_0695 IPR002035 von Willebrand factor, type A Thimo_0695 IPR011392 Tellurite resistance, TerY Thimo_0695 IPR036465 Thimo_0695 Thimo_0696 IPR001757 Cation-transporting P-type ATPase Thimo_0696 IPR004014 Cation-transporting P-type ATPase, N-terminal Thimo_0696 IPR006068 Cation-transporting P-type ATPase, C-terminal Thimo_0696 IPR006408 Calcium-transporting P-type ATPase, subfamily IIB Thimo_0696 IPR008250 P-type ATPase, A domain Thimo_0696 IPR018303 P-type ATPase, phosphorylation site Thimo_0696 IPR023214 HAD-like domain Thimo_0696 IPR023298 P-type ATPase, transmembrane domain Thimo_0696 IPR023299 P-type ATPase, cytoplasmic domain N Thimo_0696 IPR036412 Thimo_0696 Thimo_0697 IPR007296 Domain of unknown function DUF403 Thimo_0698 IPR016450 Uncharacterised conserved protein UCP005522 Thimo_0698 IPR025841 Circularly permuted ATP-grasp type 2 Thimo_0699 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 Thimo_0699 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_0700 IPR006640 Domain of unknown function SprT-like Thimo_0701 IPR003728 Ribosome maturation factor RimP Thimo_0701 IPR028989 Ribosome maturation factor RimP, N-terminal Thimo_0701 IPR028998 Ribosome maturation factor RimP, C-terminal Thimo_0701 IPR035956 Thimo_0701 Thimo_0701 IPR036847 Thimo_0701 Thimo_0702 IPR004087 K Homology domain Thimo_0702 IPR009019 K homology domain, prokaryotic type Thimo_0702 IPR010213 Transcription termination factor NusA Thimo_0702 IPR010214 Transcription termination factor NusA, C-terminal duplication Thimo_0702 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical Thimo_0702 IPR012340 Nucleic acid-binding, OB-fold Thimo_0702 IPR013735 Transcription factor NusA, N-terminal Thimo_0702 IPR015946 K homology domain-like, alpha/beta Thimo_0702 IPR022967 RNA-binding domain, S1 Thimo_0702 IPR025249 KH domain, NusA-like Thimo_0702 IPR030842 Thimo_0702 Thimo_0702 IPR036555 Thimo_0702 Thimo_0703 IPR000178 Translation initiation factor aIF-2, bacterial-like Thimo_0703 IPR000795 Elongation factor, GTP-binding domain Thimo_0703 IPR005225 Small GTP-binding protein domain Thimo_0703 IPR006847 Translation initiation factor IF-2, N-terminal Thimo_0703 IPR009000 Translation protein, beta-barrel domain Thimo_0703 IPR009061 DNA binding domain, putative Thimo_0703 IPR013575 Initiation factor 2 associated domain, bacterial Thimo_0703 IPR023115 Translation initiation factor IF- 2, domain 3 Thimo_0703 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0703 IPR036925 Thimo_0703 Thimo_0704 IPR000238 Ribosome-binding factor A Thimo_0704 IPR015946 K homology domain-like, alpha/beta Thimo_0704 IPR020053 Ribosome-binding factor A, conserved site Thimo_0704 IPR023799 Ribosome-binding factor A domain Thimo_0705 IPR002501 Pseudouridine synthase II Thimo_0705 IPR014780 tRNA pseudouridine synthase II, TruB Thimo_0705 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal Thimo_0705 IPR015947 PUA-like domain Thimo_0705 IPR020103 Pseudouridine synthase, catalytic domain Thimo_0705 IPR032819 Thimo_0705 Thimo_0705 IPR036974 Thimo_0705 Thimo_0706 IPR000589 Ribosomal protein S15 Thimo_0706 IPR005290 Ribosomal protein S15, bacterial-type Thimo_0706 IPR009068 S15/NS1, RNA-binding Thimo_0707 IPR001247 Exoribonuclease, phosphorolytic domain 1 Thimo_0707 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_0707 IPR004087 K Homology domain Thimo_0707 IPR004088 K Homology domain, type 1 Thimo_0707 IPR012162 Polyribonucleotide nucleotidyltransferase Thimo_0707 IPR012340 Nucleic acid-binding, OB-fold Thimo_0707 IPR015847 Exoribonuclease, phosphorolytic domain 2 Thimo_0707 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain Thimo_0707 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0707 IPR022967 RNA-binding domain, S1 Thimo_0707 IPR027408 PNPase/RNase PH domain Thimo_0707 IPR036345 Thimo_0707 Thimo_0707 IPR036456 Thimo_0707 Thimo_0707 IPR036612 Thimo_0707 Thimo_0708 IPR006685 Mechanosensitive ion channel MscS Thimo_0708 IPR010920 Like-Sm (LSM) domain Thimo_0708 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Thimo_0708 IPR011066 Mechanosensitive ion channel MscS, C-terminal Thimo_0708 IPR023408 Thimo_0708 Thimo_0708 IPR024393 Mechanosensitive ion channel MscS, porin domain Thimo_0708 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Thimo_0709 IPR000485 AsnC-type HTH domain Thimo_0709 IPR011008 Dimeric alpha-beta barrel Thimo_0709 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Thimo_0709 IPR019887 Transcription regulator AsnC-type, C-terminal Thimo_0709 IPR019888 Transcription regulator AsnC-type Thimo_0709 IPR036388 Thimo_0709 Thimo_0709 IPR036390 Thimo_0709 Thimo_0710 IPR000891 Pyruvate carboxyltransferase Thimo_0710 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thimo_0710 IPR005668 2-isopropylmalate synthase Thimo_0710 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thimo_0710 IPR013785 Aldolase-type TIM barrel Thimo_0710 IPR036230 Thimo_0710 Thimo_0711 IPR001705 Ribosomal protein L33 Thimo_0711 IPR011332 Zinc-binding ribosomal protein Thimo_0711 IPR018264 Ribosomal protein L33, conserved site Thimo_0711 IPR038584 Thimo_0711 Thimo_0712 IPR001383 Ribosomal protein L28 Thimo_0712 IPR026569 Ribosomal protein L28/L24 Thimo_0712 IPR034704 Thimo_0712 Thimo_0712 IPR037147 Thimo_0712 Thimo_0713 IPR000241 Putative RNA methylase domain Thimo_0713 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_0713 IPR004114 THUMP Thimo_0713 IPR017244 Ribosomal RNA large subunit methyltransferase K/L Thimo_0713 IPR019614 S-adenosylmethionine-dependent methyltransferase Thimo_0713 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0714 IPR001765 Carbonic anhydrase Thimo_0714 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site Thimo_0714 IPR036874 Thimo_0714 Thimo_0715 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_0715 IPR036105 Thimo_0715 Thimo_0717 IPR002934 Nucleotidyl transferase domain Thimo_0717 IPR003607 HD/PDEase domain Thimo_0717 IPR006674 HD domain Thimo_0717 IPR010043 Protein-PII uridylyltransferase Thimo_0717 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Thimo_0718 IPR000994 Peptidase M24, structural domain Thimo_0718 IPR001714 Peptidase M24, methionine aminopeptidase Thimo_0718 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 Thimo_0718 IPR036005 Thimo_0718 Thimo_0719 IPR001865 Ribosomal protein S2 Thimo_0719 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid Thimo_0719 IPR018130 Ribosomal protein S2, conserved site Thimo_0719 IPR023591 Ribosomal protein S2, flavodoxin-like domain Thimo_0720 IPR001816 Translation elongation factor EFTs/EF1B Thimo_0720 IPR009060 UBA-like Thimo_0720 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation Thimo_0720 IPR018101 Translation elongation factor Ts, conserved site Thimo_0720 IPR036402 Thimo_0720 Thimo_0721 IPR001048 Aspartate/glutamate/uridylate kinase Thimo_0721 IPR011817 Uridylate kinase Thimo_0721 IPR015963 Uridylate kinase, bacteria Thimo_0721 IPR036393 Thimo_0721 Thimo_0722 IPR002661 Ribosome recycling factor Thimo_0722 IPR023584 Ribosome recycling factor domain Thimo_0722 IPR036191 Thimo_0722 Thimo_0723 IPR001441 Decaprenyl diphosphate synthase-like Thimo_0723 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site Thimo_0723 IPR036424 Thimo_0723 Thimo_0724 IPR000374 Phosphatidate cytidylyltransferase Thimo_0725 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase Thimo_0725 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal Thimo_0725 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal Thimo_0725 IPR026877 DXP reductoisomerase C-terminal domain Thimo_0725 IPR036169 Thimo_0725 Thimo_0725 IPR036291 Thimo_0725 Thimo_0726 IPR001478 PDZ domain Thimo_0726 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase Thimo_0726 IPR008915 Peptidase M50 Thimo_0726 IPR036034 Thimo_0726 Thimo_0727 IPR000184 Bacterial surface antigen (D15) Thimo_0727 IPR010827 Surface antigen variable number Thimo_0727 IPR023707 Outer membrane protein assembly factor BamA Thimo_0728 IPR005632 Chaperone protein Skp Thimo_0728 IPR024930 Skp domain Thimo_0729 IPR001451 Bacterial transferase hexapeptide repeat Thimo_0729 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Thimo_0729 IPR011004 Trimeric LpxA-like Thimo_0729 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region Thimo_0730 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Thimo_0730 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Thimo_0730 IPR029069 HotDog domain Thimo_0731 IPR001451 Bacterial transferase hexapeptide repeat Thimo_0731 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Thimo_0731 IPR011004 Trimeric LpxA-like Thimo_0731 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal Thimo_0731 IPR037157 Thimo_0731 Thimo_0732 IPR003835 Glycosyl transferase, family 19 Thimo_0733 IPR012337 Ribonuclease H-like domain Thimo_0733 IPR022898 Ribonuclease HII Thimo_0733 IPR024567 Ribonuclease HII/HIII domain Thimo_0733 IPR036397 Thimo_0733 Thimo_0734 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type Thimo_0734 IPR011005 Dihydropteroate synthase-like Thimo_0734 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial Thimo_0735 IPR000086 NUDIX hydrolase domain Thimo_0735 IPR015797 NUDIX hydrolase domain-like Thimo_0735 IPR031804 Thimo_0735 Thimo_0736 IPR001602 Uncharacterised protein family UPF0047 Thimo_0736 IPR035917 Thimo_0736 Thimo_0737 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Thimo_0737 IPR011551 NTP pyrophosphohydrolase MazG, bacterial Thimo_0738 IPR001405 RadC protein Thimo_0738 IPR010994 RuvA domain 2-like Thimo_0738 IPR020891 Uncharacterised protein family UPF0758, conserved site Thimo_0738 IPR025657 RadC-like JAB domain Thimo_0739 IPR003382 Flavoprotein Thimo_0739 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC Thimo_0739 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal Thimo_0739 IPR035929 Thimo_0739 Thimo_0739 IPR036551 Thimo_0739 Thimo_0740 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase Thimo_0740 IPR029054 dUTPase-like Thimo_0740 IPR036157 Thimo_0740 Thimo_0741 IPR005841 Alpha-D-phosphohexomutase superfamily Thimo_0741 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thimo_0741 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thimo_0741 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thimo_0741 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thimo_0741 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thimo_0741 IPR036900 Thimo_0741 Thimo_0742 IPR001048 Aspartate/glutamate/uridylate kinase Thimo_0742 IPR001057 Glutamate/acetylglutamate kinase Thimo_0742 IPR004662 Acetylglutamate kinase Thimo_0742 IPR036393 Thimo_0742 Thimo_0742 IPR037528 Thimo_0742 Thimo_0743 IPR025392 Domain of unknown function DUF4124 Thimo_0744 IPR000836 Phosphoribosyltransferase domain Thimo_0744 IPR004467 Orotate phosphoribosyl transferase domain Thimo_0744 IPR023031 Orotate phosphoribosyltransferase Thimo_0744 IPR029057 Phosphoribosyltransferase-like Thimo_0745 IPR039447 Thimo_0745 Thimo_0747 IPR003746 Protein of unknown function DUF167 Thimo_0747 IPR005228 Conserved hypothetical protein CHP00251 Thimo_0747 IPR036591 Thimo_0747 Thimo_0748 IPR003425 Uncharacterised protein family Ycf19 Thimo_0749 IPR000304 Pyrroline-5-carboxylate reductase Thimo_0749 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_0749 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Thimo_0749 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain Thimo_0749 IPR036291 Thimo_0749 Thimo_0750 IPR001608 Alanine racemase, N-terminal Thimo_0750 IPR011078 Uncharacterised protein family UPF0001 Thimo_0750 IPR029066 PLP-binding barrel Thimo_0751 IPR002637 Ham1-like protein Thimo_0751 IPR020922 Non-canonical purine NTP pyrophosphatase Thimo_0751 IPR029001 Inosine triphosphate pyrophosphatase-like Thimo_0752 IPR001247 Exoribonuclease, phosphorolytic domain 1 Thimo_0752 IPR002381 Ribonuclease phosphorolytic, bacterial-type Thimo_0752 IPR015847 Exoribonuclease, phosphorolytic domain 2 Thimo_0752 IPR018336 Ribonuclease PH, conserved site Thimo_0752 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_0752 IPR027408 PNPase/RNase PH domain Thimo_0752 IPR036345 Thimo_0752 Thimo_0753 IPR000719 Protein kinase domain Thimo_0753 IPR011009 Protein kinase-like domain Thimo_0753 IPR017441 Protein kinase, ATP binding site Thimo_0754 IPR005229 Conserved hypothetical protein CHP00255 Thimo_0754 IPR013527 YicC-like, N-terminal Thimo_0754 IPR013551 Domain of unknown function DUF1732 Thimo_0755 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Thimo_0755 IPR017665 Guanylate kinase Thimo_0755 IPR020590 Guanylate kinase, conserved site Thimo_0755 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0756 IPR003716 DNA-directed RNA polymerase, omega subunit Thimo_0756 IPR006110 RNA polymerase, subunit omega/K/RPB6 Thimo_0756 IPR012293 RNA polymerase subunit, RPB6/omega Thimo_0756 IPR036161 Thimo_0756 Thimo_0757 IPR002912 ACT domain Thimo_0757 IPR003607 HD/PDEase domain Thimo_0757 IPR004095 TGS Thimo_0757 IPR004811 RelA/SpoT family Thimo_0757 IPR007685 RelA/SpoT Thimo_0757 IPR012675 Beta-grasp domain Thimo_0757 IPR012676 TGS-like Thimo_0758 IPR025737 MetA-pathway of phenol degradation, putative Thimo_0759 IPR006056 Enamine/imine deaminase YjgF-like Thimo_0759 IPR006175 YjgF/Yer057p/UK114 family Thimo_0759 IPR019897 YjgF-like protein, conserved site Thimo_0759 IPR035959 Thimo_0759 Thimo_0760 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase Thimo_0760 IPR018236 SAICAR synthetase, conserved site Thimo_0760 IPR028923 SAICAR synthetase/ADE2, N-terminal Thimo_0761 IPR000014 PAS domain Thimo_0761 IPR000160 GGDEF domain Thimo_0761 IPR001610 PAC motif Thimo_0761 IPR001633 EAL domain Thimo_0761 IPR003018 GAF domain Thimo_0761 IPR013656 PAS fold-4 Thimo_0761 IPR013767 PAS fold Thimo_0761 IPR029016 GAF domain-like Thimo_0761 IPR029787 Nucleotide cyclase Thimo_0761 IPR035919 Thimo_0761 Thimo_0761 IPR035965 Thimo_0761 Thimo_0762 IPR001279 Beta-lactamase-like Thimo_0762 IPR017782 Hydroxyacylglutathione hydrolase Thimo_0762 IPR032282 Thimo_0762 Thimo_0762 IPR036866 Thimo_0762 Thimo_0763 IPR005474 Transketolase, N-terminal Thimo_0763 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_0763 IPR005477 Deoxyxylulose-5-phosphate synthase Thimo_0763 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_0763 IPR020826 Transketolase binding site Thimo_0763 IPR029061 Thiamin diphosphate-binding fold Thimo_0763 IPR033248 Thimo_0763 Thimo_0764 IPR000847 Transcription regulator HTH, LysR Thimo_0764 IPR005119 LysR, substrate-binding Thimo_0764 IPR036388 Thimo_0764 Thimo_0764 IPR036390 Thimo_0764 Thimo_0765 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thimo_0765 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thimo_0765 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site Thimo_0765 IPR020888 Ribulose bisphosphate carboxylase, large subunit Thimo_0765 IPR036376 Thimo_0765 Thimo_0765 IPR036422 Thimo_0765 Thimo_0766 IPR000894 Ribulose bisphosphate carboxylase small chain, domain Thimo_0766 IPR036385 Thimo_0766 Thimo_0767 IPR000014 PAS domain Thimo_0767 IPR000160 GGDEF domain Thimo_0767 IPR001610 PAC motif Thimo_0767 IPR013656 PAS fold-4 Thimo_0767 IPR029787 Nucleotide cyclase Thimo_0767 IPR035965 Thimo_0767 Thimo_0768 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_0768 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_0768 IPR029061 Thiamin diphosphate-binding fold Thimo_0768 IPR033248 Thimo_0768 Thimo_0769 IPR005474 Transketolase, N-terminal Thimo_0769 IPR029061 Thiamin diphosphate-binding fold Thimo_0774 IPR001821 [NiFe]-hydrogenase, small subunit Thimo_0774 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_0774 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thimo_0774 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thimo_0774 IPR037024 Thimo_0774 Thimo_0774 IPR037148 Thimo_0774 Thimo_0775 IPR036197 Thimo_0775 Thimo_0776 IPR004017 Cysteine-rich domain Thimo_0776 IPR009051 Alpha-helical ferredoxin Thimo_0776 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0776 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0777 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_0777 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thimo_0777 IPR029014 NiFe hydrogenase-like Thimo_0779 IPR020287 Tail sheath protein, C-terminal domain Thimo_0779 IPR035089 Thimo_0779 Thimo_0780 IPR010667 Bacteriophage T4, Gp19, tail tube Thimo_0780 IPR011747 Conserved hypothetical protein CHP02241 Thimo_0783 IPR025351 Protein of unknown function DUF4255 Thimo_0784 IPR003593 AAA+ ATPase domain Thimo_0784 IPR003959 ATPase, AAA-type, core Thimo_0784 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0786 IPR025295 Domain of unknown function DUF4157 Thimo_0790 IPR037026 Thimo_0790 Thimo_0792 IPR007048 GpW/Gp25/anti-adapter protein IraD Thimo_0793 IPR006949 Baseplate assembly protein J-like, predicted Thimo_0793 IPR011749 Conserved hypothetical protein CHP02243 Thimo_0794 IPR006949 Baseplate assembly protein J-like, predicted Thimo_0794 IPR011749 Conserved hypothetical protein CHP02243 Thimo_0798 IPR007460 Burkholderia phage Bups phi1, Orf7.3 Thimo_0798 IPR038573 Thimo_0798 Thimo_0799 IPR025528 Protein of unknown function DUF4415 Thimo_0801 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_0801 IPR035897 Thimo_0801 Thimo_0802 IPR002686 Transposase IS200-like Thimo_0802 IPR036515 Thimo_0802 Thimo_0804 IPR010921 Trp repressor/replication initiator Thimo_0805 IPR001584 Integrase, catalytic core Thimo_0805 IPR012337 Ribonuclease H-like domain Thimo_0805 IPR025948 HTH-like domain Thimo_0805 IPR036397 Thimo_0805 Thimo_0807 IPR000983 Bacterial general secretion pathway protein G-type pilin Thimo_0807 IPR012902 Prokaryotic N-terminal methylation site Thimo_0807 IPR031982 Thimo_0807 Thimo_0808 IPR012902 Prokaryotic N-terminal methylation site Thimo_0813 IPR005533 AMOP Thimo_0813 IPR025295 Domain of unknown function DUF4157 Thimo_0817 IPR021440 Protein of unknown function DUF3089 Thimo_0817 IPR029058 Alpha/Beta hydrolase fold Thimo_0819 IPR000182 GNAT domain Thimo_0819 IPR016181 Acyl-CoA N-acyltransferase Thimo_0820 IPR006747 Protein of unknown function DUF599 Thimo_0821 IPR006597 Sel1-like Thimo_0821 IPR011990 Tetratricopeptide-like helical domain Thimo_0822 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0822 IPR003660 HAMP linker domain Thimo_0822 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0822 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0822 IPR036097 Thimo_0822 Thimo_0822 IPR036890 Thimo_0822 Thimo_0823 IPR001789 Signal transduction response regulator, receiver domain Thimo_0823 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_0823 IPR002197 DNA binding HTH domain, Fis-type Thimo_0823 IPR003593 AAA+ ATPase domain Thimo_0823 IPR009057 Homeodomain-like Thimo_0823 IPR011006 CheY-like superfamily Thimo_0823 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_0823 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_0823 IPR025944 Sigma-54 interaction domain, conserved site Thimo_0823 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0826 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V Thimo_0826 IPR011057 Mss4-like Thimo_0828 IPR007300 CidB/LrgB family Thimo_0829 IPR005538 LrgA/CidA family Thimo_0830 IPR029058 Alpha/Beta hydrolase fold Thimo_0831 IPR010693 Divergent 4Fe-4S mono-cluster Thimo_0831 IPR018967 Iron sulphur-containing domain, CDGSH-type Thimo_0834 IPR000014 PAS domain Thimo_0834 IPR001789 Signal transduction response regulator, receiver domain Thimo_0834 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_0834 IPR003660 HAMP linker domain Thimo_0834 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_0834 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_0834 IPR011006 CheY-like superfamily Thimo_0834 IPR035965 Thimo_0834 Thimo_0834 IPR036097 Thimo_0834 Thimo_0834 IPR036890 Thimo_0834 Thimo_0835 IPR001199 Cytochrome b5-like heme/steroid binding domain Thimo_0835 IPR036400 Thimo_0835 Thimo_0836 IPR001260 Coproporphyrinogen III oxidase, aerobic Thimo_0836 IPR018375 Coproporphyrinogen III oxidase, conserved site Thimo_0836 IPR036406 Thimo_0836 Thimo_0838 IPR000644 CBS domain Thimo_0840 IPR002852 Uncharacterised protein family UPF0251 Thimo_0840 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_0840 IPR036105 Thimo_0840 Thimo_0841 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0841 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0841 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0841 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0842 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_0842 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0842 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0843 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_0843 IPR036105 Thimo_0843 Thimo_0844 IPR000850 Adenylate kinase/UMP-CMP kinase Thimo_0844 IPR006259 Adenylate kinase subfamily Thimo_0844 IPR007862 Adenylate kinase, active site lid domain Thimo_0844 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0844 IPR033690 Thimo_0844 Thimo_0845 IPR005746 Thioredoxin Thimo_0845 IPR013766 Thioredoxin domain Thimo_0845 IPR017937 Thioredoxin, conserved site Thimo_0845 IPR036249 Thimo_0845 Thimo_0846 IPR009659 Protein of unknown function DUF1249 Thimo_0848 IPR001647 DNA-binding HTH domain, TetR-type Thimo_0848 IPR009057 Homeodomain-like Thimo_0848 IPR036271 Thimo_0848 Thimo_0848 IPR039538 Thimo_0848 Thimo_0849 IPR006143 RND efflux pump, membrane fusion protein Thimo_0849 IPR032317 Thimo_0849 Thimo_0850 IPR001036 Acriflavin resistance protein Thimo_0850 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thimo_0850 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_0851 IPR008854 TPMT family Thimo_0851 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification Thimo_0851 IPR025835 Thiopurine S-methyltransferase Thimo_0851 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0853 IPR000160 GGDEF domain Thimo_0853 IPR029151 Periplasmic sensor domain-like Thimo_0853 IPR029787 Nucleotide cyclase Thimo_0854 IPR000160 GGDEF domain Thimo_0854 IPR029151 Periplasmic sensor domain-like Thimo_0854 IPR029787 Nucleotide cyclase Thimo_0855 IPR005325 Protein of unknown function DUF308, membrane Thimo_0856 IPR038731 Thimo_0856 Thimo_0857 IPR000917 Sulfatase Thimo_0857 IPR012549 Domain of unknown function DUF1705 Thimo_0857 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Thimo_0857 IPR017850 Alkaline-phosphatase-like, core domain Thimo_0859 IPR001173 Glycosyltransferase 2-like Thimo_0859 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0860 IPR006694 Fatty acid hydroxylase Thimo_0862 IPR007197 Radical SAM Thimo_0862 IPR013785 Aldolase-type TIM barrel Thimo_0862 IPR024521 Domain of unknown function DUF3641 Thimo_0862 IPR026351 Radical SAM/Cys-rich domain protein Thimo_0863 IPR018641 Transferase 1, rSAM/selenodomain-associated Thimo_0863 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0866 IPR000836 Phosphoribosyltransferase domain Thimo_0866 IPR029057 Phosphoribosyltransferase-like Thimo_0867 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0867 IPR031314 Thimo_0867 Thimo_0868 IPR003018 GAF domain Thimo_0868 IPR029016 GAF domain-like Thimo_0869 IPR003477 mRNA interferase PemK-like protein Thimo_0869 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Thimo_0870 IPR018739 Domain of unknown function DUF2281 Thimo_0871 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_0871 IPR036165 Thimo_0871 Thimo_0873 IPR000014 PAS domain Thimo_0873 IPR001610 PAC motif Thimo_0873 IPR035965 Thimo_0873 Thimo_0874 IPR019587 Polyketide cyclase/dehydrase Thimo_0874 IPR023393 START-like domain Thimo_0875 IPR036412 Thimo_0875 Thimo_0876 IPR001852 Pyridoxine biosynthesis protein Thimo_0876 IPR011060 Ribulose-phosphate binding barrel Thimo_0876 IPR013785 Aldolase-type TIM barrel Thimo_0876 IPR033755 Thimo_0876 Thimo_0877 IPR002161 PdxT/SNO family Thimo_0877 IPR029062 Class I glutamine amidotransferase-like Thimo_0878 IPR035437 Thimo_0878 Thimo_0879 IPR000073 Alpha/beta hydrolase fold-1 Thimo_0879 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase Thimo_0879 IPR029058 Alpha/Beta hydrolase fold Thimo_0880 IPR006073 GTP binding domain Thimo_0880 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0881 IPR006073 GTP binding domain Thimo_0881 IPR021147 Protein of unknown function DUF697 Thimo_0881 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0882 IPR022742 Putative lysophospholipase Thimo_0882 IPR029058 Alpha/Beta hydrolase fold Thimo_0883 IPR000873 AMP-dependent synthetase/ligase Thimo_0883 IPR025110 AMP-binding enzyme C-terminal domain Thimo_0884 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thimo_0884 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thimo_0884 IPR036376 Thimo_0884 Thimo_0884 IPR036422 Thimo_0884 Thimo_0885 IPR001602 Uncharacterised protein family UPF0047 Thimo_0885 IPR035917 Thimo_0885 Thimo_0887 IPR000086 NUDIX hydrolase domain Thimo_0887 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 Thimo_0887 IPR015797 NUDIX hydrolase domain-like Thimo_0889 IPR010260 Bacteriophage P4, Orf88 Thimo_0892 IPR002611 IstB-like ATP-binding protein Thimo_0892 IPR003593 AAA+ ATPase domain Thimo_0892 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0893 IPR014111 Type IV conjugative transfer system protein TraF Thimo_0893 IPR036249 Thimo_0893 Thimo_0893 IPR039555 Thimo_0893 Thimo_0894 IPR010927 Type IV conjugative transfer system protein TraH Thimo_0895 IPR012931 TraG-like, N-terminal Thimo_0895 IPR023346 Lysozyme-like domain Thimo_0896 IPR002765 Uncharacterised protein family UPF0145 Thimo_0896 IPR035439 Thimo_0896 Thimo_0898 IPR007421 ATPase, AAA-4 Thimo_0898 IPR038461 Thimo_0898 Thimo_0901 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_0901 IPR002197 DNA binding HTH domain, Fis-type Thimo_0901 IPR003593 AAA+ ATPase domain Thimo_0901 IPR009057 Homeodomain-like Thimo_0901 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_0901 IPR025944 Sigma-54 interaction domain, conserved site Thimo_0901 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0902 IPR025354 Protein of unknown function DUF4258 Thimo_0903 IPR002035 von Willebrand factor, type A Thimo_0903 IPR036465 Thimo_0903 Thimo_0904 IPR036457 Thimo_0904 Thimo_0905 IPR000719 Protein kinase domain Thimo_0905 IPR011009 Protein kinase-like domain Thimo_0906 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0908 IPR011704 ATPase, dynein-related, AAA domain Thimo_0908 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0911 IPR010921 Trp repressor/replication initiator Thimo_0912 IPR001584 Integrase, catalytic core Thimo_0912 IPR012337 Ribonuclease H-like domain Thimo_0912 IPR025948 HTH-like domain Thimo_0912 IPR036397 Thimo_0912 Thimo_0914 IPR003607 HD/PDEase domain Thimo_0915 IPR003395 RecF/RecN/SMC, N-terminal Thimo_0915 IPR011890 Structural maintenance of chromosomes protein, prokaryotic Thimo_0915 IPR024704 Structural maintenance of chromosomes protein Thimo_0915 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0915 IPR036277 Thimo_0915 Thimo_0916 IPR007449 ZipA, C-terminal FtsZ-binding domain Thimo_0916 IPR011919 Cell division protein ZipA Thimo_0916 IPR036765 Thimo_0916 Thimo_0917 IPR001357 BRCT domain Thimo_0917 IPR001679 NAD-dependent DNA ligase Thimo_0917 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thimo_0917 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type Thimo_0917 IPR004150 NAD-dependent DNA ligase, OB-fold Thimo_0917 IPR010994 RuvA domain 2-like Thimo_0917 IPR012340 Nucleic acid-binding, OB-fold Thimo_0917 IPR013839 NAD-dependent DNA ligase, adenylation Thimo_0917 IPR013840 NAD-dependent DNA ligase, N-terminal Thimo_0917 IPR018239 NAD-dependent DNA ligase, active site Thimo_0917 IPR033136 Thimo_0917 Thimo_0917 IPR036420 Thimo_0917 Thimo_0919 IPR001148 Alpha carbonic anhydrase Thimo_0919 IPR036398 Thimo_0919 Thimo_0920 IPR004193 Glycoside hydrolase, family 13, N-terminal Thimo_0920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_0920 IPR011837 Glycogen debranching enzyme, GlgX type Thimo_0920 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_0920 IPR013783 Immunoglobulin-like fold Thimo_0920 IPR014756 Immunoglobulin E-set Thimo_0920 IPR017853 Glycoside hydrolase, superfamily Thimo_0921 IPR000537 UbiA prenyltransferase family Thimo_0921 IPR006372 Bacteriochlorophyll/chlorophyll synthetase Thimo_0922 IPR002938 Monooxygenase, FAD-binding Thimo_0922 IPR010253 Geranylgeranyl reductase, plant/prokaryotic Thimo_0922 IPR011777 Geranylgeranyl reductase family Thimo_0922 IPR036188 Thimo_0922 Thimo_0923 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Thimo_0923 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_0923 IPR005856 Cysteine synthase K/M Thimo_0923 IPR005859 Cysteine synthase A Thimo_0923 IPR036052 Thimo_0923 Thimo_0924 IPR010662 Putative hydrolase RBBP9/YdeN Thimo_0924 IPR029058 Alpha/Beta hydrolase fold Thimo_0925 IPR001633 EAL domain Thimo_0925 IPR035919 Thimo_0925 Thimo_0926 IPR025392 Domain of unknown function DUF4124 Thimo_0927 IPR000847 Transcription regulator HTH, LysR Thimo_0927 IPR005119 LysR, substrate-binding Thimo_0927 IPR036388 Thimo_0927 Thimo_0927 IPR036390 Thimo_0927 Thimo_0928 IPR003439 ABC transporter-like Thimo_0928 IPR003593 AAA+ ATPase domain Thimo_0928 IPR017871 ABC transporter, conserved site Thimo_0928 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0929 IPR003339 ABC/ECF transporter, transmembrane component Thimo_0929 IPR012809 ECF transporter, transmembrane component CbiQ/NikQ Thimo_0931 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family Thimo_0932 IPR019613 Protein of unknown function DUF4198 Thimo_0933 IPR007404 Protein of unknown function DUF457 Thimo_0934 IPR001095 Acetyl-CoA carboxylase, alpha subunit Thimo_0934 IPR029045 ClpP/crotonase-like domain Thimo_0935 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase Thimo_0935 IPR012094 Lysidine-tRNA(Ile) synthetase Thimo_0935 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal Thimo_0935 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal Thimo_0935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0935 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain Thimo_0936 IPR018687 Protein of unknown function DUF2177, membrane Thimo_0937 IPR003333 Mycolic acid cyclopropane synthase Thimo_0937 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0938 IPR010775 Protein of unknown function DUF1365 Thimo_0939 IPR002937 Amine oxidase Thimo_0939 IPR036188 Thimo_0939 Thimo_0942 IPR000515 MetI-like domain Thimo_0942 IPR035906 Thimo_0942 Thimo_0943 IPR000515 MetI-like domain Thimo_0943 IPR035906 Thimo_0943 Thimo_0944 IPR003439 ABC transporter-like Thimo_0944 IPR003593 AAA+ ATPase domain Thimo_0944 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit Thimo_0944 IPR008995 Molybdate/tungstate binding, C-terminal Thimo_0944 IPR013611 Transport-associated OB, type 2 Thimo_0944 IPR017871 ABC transporter, conserved site Thimo_0944 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0945 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein Thimo_0945 IPR006059 Bacterial extracellular solute-binding, family 1 Thimo_0946 IPR002668 Concentrative nucleoside transporter N-terminal domain Thimo_0946 IPR011642 Nucleoside recognition Gate Thimo_0946 IPR011657 Concentrative nucleoside transporter C-terminal domain Thimo_0947 IPR000397 Heat shock protein Hsp33 Thimo_0947 IPR016153 Heat shock protein Hsp33, N-terminal Thimo_0947 IPR016154 Heat shock protein Hsp33, C-terminal Thimo_0947 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain Thimo_0948 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE Thimo_0948 IPR038530 Thimo_0948 Thimo_0949 IPR036411 Thimo_0949 Thimo_0951 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0953 IPR000014 PAS domain Thimo_0953 IPR000160 GGDEF domain Thimo_0953 IPR001610 PAC motif Thimo_0953 IPR001633 EAL domain Thimo_0953 IPR012226 Oxygen sensor diguanylate cyclase/c-di-GMP phosphodiesterase Thimo_0953 IPR013767 PAS fold Thimo_0953 IPR029787 Nucleotide cyclase Thimo_0953 IPR035919 Thimo_0953 Thimo_0953 IPR035965 Thimo_0953 Thimo_0954 IPR011649 KaiB domain Thimo_0954 IPR036249 Thimo_0954 Thimo_0955 IPR003593 AAA+ ATPase domain Thimo_0955 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA Thimo_0955 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0955 IPR030665 Thimo_0955 Thimo_0956 IPR001753 Crotonase superfamily Thimo_0956 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Thimo_0956 IPR029045 ClpP/crotonase-like domain Thimo_0957 IPR002686 Transposase IS200-like Thimo_0957 IPR036515 Thimo_0957 Thimo_0958 IPR000808 Mrp, conserved site Thimo_0958 IPR002744 Domain of unknown function DUF59 Thimo_0958 IPR019591 Mrp/NBP35 ATP-binding protein Thimo_0958 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0958 IPR033756 Thimo_0958 Thimo_0958 IPR034904 Thimo_0958 Thimo_0959 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_0959 IPR002547 tRNA-binding domain Thimo_0959 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal Thimo_0959 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_0959 IPR012340 Nucleic acid-binding, OB-fold Thimo_0959 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0959 IPR014758 Methionyl-tRNA synthetase Thimo_0959 IPR015413 Methionyl/Leucyl tRNA synthetase Thimo_0959 IPR023458 Methionine-tRNA ligase, type 1 Thimo_0959 IPR029038 Methionyl-tRNA synthetase, Zn-domain Thimo_0959 IPR033911 Thimo_0959 Thimo_0960 IPR003667 Electron transport complex, Rnf/Nqr Thimo_0960 IPR011293 Electron transport complex, RnfA Thimo_0961 IPR007202 4Fe-4S domain Thimo_0961 IPR010207 Electron transport complex, RnfB Thimo_0961 IPR016463 Electron transport complex, RnfB, Proteobacteria Thimo_0961 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0962 IPR009051 Alpha-helical ferredoxin Thimo_0962 IPR010208 Electron transport complex protein RnfC Thimo_0962 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Thimo_0962 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_0962 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_0962 IPR019554 Soluble ligand binding domain Thimo_0962 IPR026902 RnfC Barrel sandwich hybrid domain Thimo_0962 IPR037225 Thimo_0962 Thimo_0963 IPR004338 NADH-quinone reductase NQR2/RnfD Thimo_0963 IPR011303 Electron transport complex, RnfD Thimo_0964 IPR007329 FMN-binding Thimo_0964 IPR010209 Electron transport complex, RnfG Thimo_0965 IPR003667 Electron transport complex, Rnf/Nqr Thimo_0965 IPR010968 Electron transport complex, RnfE Thimo_0966 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Thimo_0967 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thimo_0967 IPR027304 Trigger factor/SurA domain Thimo_0968 IPR005545 YCII-related Thimo_0968 IPR011008 Dimeric alpha-beta barrel Thimo_0969 IPR006008 Intracellular septation protein A Thimo_0970 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thimo_0970 IPR004013 PHP, C-terminal Thimo_0970 IPR016195 Polymerase/histidinol phosphatase-like Thimo_0971 IPR006070 YrdC-like domain Thimo_0971 IPR017945 DHBP synthase RibB-like alpha/beta domain Thimo_0973 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_0973 IPR002305 Aminoacyl-tRNA synthetase, class Ic Thimo_0973 IPR002306 Tryptophan-tRNA ligase Thimo_0973 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_0973 IPR024109 Tryptophan-tRNA ligase, bacterial-type Thimo_0974 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA Thimo_0975 IPR005234 Chromosome segregation/condensation protein ScpB Thimo_0975 IPR036388 Thimo_0975 Thimo_0975 IPR036390 Thimo_0975 Thimo_0976 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal Thimo_0976 IPR005835 Nucleotidyl transferase Thimo_0976 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Thimo_0976 IPR011051 RmlC-like cupin domain Thimo_0976 IPR014710 RmlC-like jelly roll fold Thimo_0976 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_0977 IPR005841 Alpha-D-phosphohexomutase superfamily Thimo_0977 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thimo_0977 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thimo_0977 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thimo_0977 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thimo_0977 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thimo_0977 IPR016066 Alpha-D-phosphohexomutase, conserved site Thimo_0977 IPR036900 Thimo_0977 Thimo_0978 IPR026433 EPS-associated transcriptional regulator, MarR family Thimo_0978 IPR036388 Thimo_0978 Thimo_0978 IPR036390 Thimo_0978 Thimo_0980 IPR003715 Polysaccharide export protein Thimo_0980 IPR019554 Soluble ligand binding domain Thimo_0982 IPR002797 Polysaccharide biosynthesis protein Thimo_0987 IPR006842 Transposase (putative), YhgA-like Thimo_0989 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Thimo_0990 IPR006342 Methyltransferase FkbM Thimo_0990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0991 IPR000863 Sulfotransferase domain Thimo_0991 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0992 IPR001962 Asparagine synthase Thimo_0992 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thimo_0992 IPR017932 Glutamine amidotransferase type 2 domain Thimo_0992 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_0993 IPR013216 Methyltransferase type 11 Thimo_0993 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_0996 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_0999 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1000 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 Thimo_1000 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Thimo_1000 IPR032877 Thimo_1000 Thimo_1003 IPR001296 Glycosyl transferase, family 1 Thimo_1003 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1004 IPR001296 Glycosyl transferase, family 1 Thimo_1004 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1005 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1006 IPR001173 Glycosyltransferase 2-like Thimo_1006 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_1007 IPR013216 Methyltransferase type 11 Thimo_1007 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1008 IPR008929 Chondroitin AC/alginate lyase Thimo_1012 IPR001584 Integrase, catalytic core Thimo_1012 IPR012337 Ribonuclease H-like domain Thimo_1012 IPR025948 HTH-like domain Thimo_1012 IPR036397 Thimo_1012 Thimo_1013 IPR000683 Oxidoreductase, N-terminal Thimo_1013 IPR011032 GroES (chaperonin 10)-like Thimo_1013 IPR013149 Alcohol dehydrogenase, C-terminal Thimo_1013 IPR020843 Polyketide synthase, enoylreductase Thimo_1013 IPR036291 Thimo_1013 Thimo_1018 IPR008929 Chondroitin AC/alginate lyase Thimo_1018 IPR012480 Heparinase II/III-like Thimo_1018 IPR031680 Thimo_1018 Thimo_1019 IPR003331 UDP-N-acetylglucosamine 2-epimerase Thimo_1019 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type Thimo_1021 IPR014942 Protein of unknown function DUF1814 Thimo_1024 IPR022148 Protein of unknown function DUF3680 Thimo_1027 IPR001296 Glycosyl transferase, family 1 Thimo_1027 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1028 IPR002514 Transposase IS3/IS911family Thimo_1028 IPR009057 Homeodomain-like Thimo_1028 IPR036388 Thimo_1028 Thimo_1029 IPR001584 Integrase, catalytic core Thimo_1029 IPR012337 Ribonuclease H-like domain Thimo_1029 IPR025948 HTH-like domain Thimo_1029 IPR036397 Thimo_1029 Thimo_1032 IPR000361 FeS cluster biogenesis Thimo_1032 IPR016092 FeS cluster insertion protein Thimo_1032 IPR017870 FeS cluster insertion, C-terminal, conserved site Thimo_1032 IPR023063 Iron-sulfur cluster insertion protein ErpA Thimo_1032 IPR035903 Thimo_1032 Thimo_1034 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_1034 IPR002305 Aminoacyl-tRNA synthetase, class Ic Thimo_1034 IPR002307 Tyrosine-tRNA ligase Thimo_1034 IPR002942 RNA-binding S4 domain Thimo_1034 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1034 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 Thimo_1034 IPR036986 Thimo_1034 Thimo_1040 IPR016195 Polymerase/histidinol phosphatase-like Thimo_1040 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC Thimo_1041 IPR001100 Thimo_1041 Thimo_1041 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thimo_1041 IPR006322 Glutathione reductase, eukaryote/bacterial Thimo_1041 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Thimo_1041 IPR016156 FAD/NAD-linked reductase, dimerisation domain Thimo_1041 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1041 IPR036188 Thimo_1041 Thimo_1042 IPR002109 Glutaredoxin Thimo_1042 IPR011767 Glutaredoxin active site Thimo_1042 IPR011906 Glutaredoxin domain Thimo_1042 IPR013740 Redoxin Thimo_1042 IPR014025 Glutaredoxin subgroup Thimo_1042 IPR036249 Thimo_1042 Thimo_1043 IPR011757 Lytic transglycosylase MltB Thimo_1043 IPR023346 Lysozyme-like domain Thimo_1043 IPR031304 Thimo_1043 Thimo_1044 IPR001650 Helicase, C-terminal Thimo_1044 IPR004609 ATP-dependent DNA helicase RecG Thimo_1044 IPR011545 DEAD/DEAH box helicase domain Thimo_1044 IPR012340 Nucleic acid-binding, OB-fold Thimo_1044 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1044 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1044 IPR033454 Thimo_1044 Thimo_1045 IPR000537 UbiA prenyltransferase family Thimo_1045 IPR006370 4-hydroxybenzoate polyprenyl transferase Thimo_1045 IPR030470 Thimo_1045 Thimo_1047 IPR001977 Dephospho-CoA kinase Thimo_1047 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1048 IPR000045 Prepilin type IV endopeptidase, peptidase domain Thimo_1048 IPR010627 Peptidase A24A, N-terminal Thimo_1048 IPR014032 Peptidase A24A, prepilin type IV, bacterial Thimo_1049 IPR003004 GspF/PilC family Thimo_1049 IPR018076 Type II secretion system F domain Thimo_1050 IPR001482 Type II secretion system protein E Thimo_1050 IPR007831 General secretory system II, protein E, N-terminal Thimo_1050 IPR013374 ATPase, type IV, pilus assembly, PilB Thimo_1050 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1050 IPR037257 Thimo_1050 Thimo_1051 IPR021139 NYN domain, limkain-b1-type Thimo_1052 IPR000873 AMP-dependent synthetase/ligase Thimo_1052 IPR011904 Acetate-CoA ligase Thimo_1052 IPR020845 AMP-binding, conserved site Thimo_1052 IPR025110 AMP-binding enzyme C-terminal domain Thimo_1052 IPR032387 Thimo_1052 Thimo_1053 IPR004879 Domain of unknown function DUF255 Thimo_1053 IPR008928 Six-hairpin glycosidase-like Thimo_1053 IPR024705 Spermatogenesis-associated protein 20 Thimo_1053 IPR036249 Thimo_1053 Thimo_1054 IPR001465 Malate synthase Thimo_1054 IPR006253 Malate synthase G Thimo_1054 IPR011076 Malate synthase-like Thimo_1054 IPR023310 Malate synthase G, beta sub-domain Thimo_1055 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Thimo_1055 IPR031100 Thimo_1055 Thimo_1057 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA Thimo_1057 IPR036100 Thimo_1057 Thimo_1058 IPR002569 Peptide methionine sulphoxide reductase MsrA Thimo_1058 IPR036509 Thimo_1058 Thimo_1059 IPR006439 HAD hydrolase, subfamily IA Thimo_1059 IPR023214 HAD-like domain Thimo_1059 IPR036412 Thimo_1059 Thimo_1060 IPR002616 tRNA-guanine(15) transglycosylase-like Thimo_1060 IPR004803 Queuine tRNA-ribosyltransferase Thimo_1060 IPR036511 Thimo_1060 Thimo_1061 IPR003849 Preprotein translocase YajC Thimo_1062 IPR001036 Acriflavin resistance protein Thimo_1062 IPR005791 Protein translocase subunit SecD Thimo_1062 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thimo_1062 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thimo_1062 IPR027398 SecD export protein N-terminal TM domain Thimo_1063 IPR005665 Protein-export membrane protein SecF, bacterial Thimo_1063 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Thimo_1063 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Thimo_1063 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Thimo_1064 IPR000760 Inositol monophosphatase Thimo_1064 IPR020550 Inositol monophosphatase, conserved site Thimo_1064 IPR020583 Inositol monophosphatase, metal-binding site Thimo_1064 IPR022337 Inositol monophosphatase, SuhB Thimo_1065 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thimo_1065 IPR004384 RNA methyltransferase TrmH, group 1 Thimo_1065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_1065 IPR029028 Alpha/beta knot methyltransferases Thimo_1066 IPR001451 Bacterial transferase hexapeptide repeat Thimo_1066 IPR005881 Serine O-acetyltransferase Thimo_1066 IPR010493 Serine acetyltransferase, N-terminal Thimo_1066 IPR011004 Trimeric LpxA-like Thimo_1066 IPR018357 Hexapeptide transferase, conserved site Thimo_1067 IPR014991 Protein of unknown function DUF1840 Thimo_1068 IPR006700 Ribosomal RNA small subunit methyltransferase E Thimo_1068 IPR015947 PUA-like domain Thimo_1068 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_1068 IPR029028 Alpha/beta knot methyltransferases Thimo_1069 IPR006696 Protein of unknown function DUF423 Thimo_1071 IPR000362 Fumarate lyase family Thimo_1071 IPR008948 L-Aspartase-like Thimo_1071 IPR009049 Argininosuccinate lyase Thimo_1071 IPR020557 Fumarate lyase, conserved site Thimo_1071 IPR022761 Fumarate lyase, N-terminal Thimo_1071 IPR024083 Fumarase/histidase, N-terminal Thimo_1071 IPR029419 Argininosuccinate lyase, C-terminal Thimo_1072 IPR003718 OsmC/Ohr family Thimo_1072 IPR015946 K homology domain-like, alpha/beta Thimo_1072 IPR036102 Thimo_1072 Thimo_1073 IPR021830 Protein of unknown function DUF3422 Thimo_1074 IPR006680 Amidohydrolase 1 Thimo_1074 IPR032466 Thimo_1074 Thimo_1075 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C Thimo_1075 IPR012338 Beta-lactamase/transpeptidase-like Thimo_1076 IPR001940 Peptidase S1C Thimo_1076 IPR009003 Trypsin-like cysteine/serine peptidase domain Thimo_1077 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain Thimo_1078 IPR001796 Dihydrofolate reductase domain Thimo_1078 IPR012259 Dihydrofolate reductase Thimo_1078 IPR017925 Dihydrofolate reductase conserved site Thimo_1078 IPR024072 Dihydrofolate reductase-like domain Thimo_1079 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Thimo_1080 IPR004821 Cytidyltransferase-like domain Thimo_1080 IPR005248 Probable nicotinate-nucleotide adenylyltransferase Thimo_1080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1081 IPR000965 Gamma-glutamyl phosphate reductase GPR Thimo_1081 IPR012134 Glutamate-5-semialdehyde dehydrogenase Thimo_1081 IPR015590 Aldehyde dehydrogenase domain Thimo_1081 IPR016161 Aldehyde/histidinol dehydrogenase Thimo_1081 IPR016162 Aldehyde dehydrogenase, N-terminal Thimo_1081 IPR016163 Aldehyde dehydrogenase, C-terminal Thimo_1081 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site Thimo_1082 IPR005790 DNA polymerase III, delta subunit Thimo_1082 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Thimo_1082 IPR010372 DNA polymerase III, delta Thimo_1082 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1082 IPR032780 Thimo_1082 Thimo_1083 IPR007485 Lipopolysaccharide assembly, LptE Thimo_1084 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_1084 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thimo_1084 IPR002302 Leucine-tRNA ligase Thimo_1084 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thimo_1084 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_1084 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thimo_1084 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1084 IPR015413 Methionyl/Leucyl tRNA synthetase Thimo_1084 IPR025709 Leucyl-tRNA synthetase, editing domain Thimo_1085 IPR000089 Biotin/lipoyl attachment Thimo_1085 IPR001100 Thimo_1085 Thimo_1085 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thimo_1085 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thimo_1085 IPR006258 Dihydrolipoamide dehydrogenase Thimo_1085 IPR011053 Single hybrid motif Thimo_1085 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site Thimo_1085 IPR016156 FAD/NAD-linked reductase, dimerisation domain Thimo_1085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1085 IPR036188 Thimo_1085 Thimo_1086 IPR000089 Biotin/lipoyl attachment Thimo_1086 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain Thimo_1086 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thimo_1086 IPR004167 E3 binding Thimo_1086 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex Thimo_1086 IPR011053 Single hybrid motif Thimo_1086 IPR023213 Chloramphenicol acetyltransferase-like domain Thimo_1086 IPR036625 Thimo_1086 Thimo_1087 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type Thimo_1087 IPR005474 Transketolase, N-terminal Thimo_1087 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_1087 IPR029061 Thiamin diphosphate-binding fold Thimo_1095 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 Thimo_1095 IPR036748 Thimo_1095 Thimo_1096 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thimo_1096 IPR004839 Aminotransferase, class I/classII Thimo_1096 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1096 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1096 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1097 IPR001342 Homoserine dehydrogenase, catalytic Thimo_1097 IPR002912 ACT domain Thimo_1097 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding Thimo_1097 IPR016204 Homoserine dehydrogenase Thimo_1097 IPR019811 Homoserine dehydrogenase, conserved site Thimo_1097 IPR036291 Thimo_1097 Thimo_1099 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1099 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site Thimo_1099 IPR012020 AB-hydrolase YheT, putative Thimo_1099 IPR029058 Alpha/Beta hydrolase fold Thimo_1100 IPR003423 Outer membrane efflux protein Thimo_1100 IPR010130 Type I secretion outer membrane protein, TolC Thimo_1101 IPR000453 Chorismate synthase Thimo_1101 IPR020541 Chorismate synthase, conserved site Thimo_1101 IPR035904 Thimo_1101 Thimo_1102 IPR024989 Major facilitator superfamily associated domain Thimo_1102 IPR026032 Phenylproprionate/maltose permease Thimo_1102 IPR036259 Thimo_1102 Thimo_1103 IPR004193 Glycoside hydrolase, family 13, N-terminal Thimo_1103 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_1103 IPR011837 Glycogen debranching enzyme, GlgX type Thimo_1103 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_1103 IPR013783 Immunoglobulin-like fold Thimo_1103 IPR014756 Immunoglobulin E-set Thimo_1103 IPR017853 Glycoside hydrolase, superfamily Thimo_1106 IPR003439 ABC transporter-like Thimo_1106 IPR003593 AAA+ ATPase domain Thimo_1106 IPR017871 ABC transporter, conserved site Thimo_1106 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1107 IPR003453 Permease domain Thimo_1107 IPR030802 Thimo_1107 Thimo_1107 IPR036513 Thimo_1107 Thimo_1108 IPR009009 RlpA-like double-psi beta-barrel domain Thimo_1108 IPR012997 Rare lipoprotein A, bacterial Thimo_1108 IPR034718 Thimo_1108 Thimo_1108 IPR036908 Thimo_1108 Thimo_1109 IPR012507 YibE/F-like Thimo_1110 IPR001952 Alkaline phosphatase Thimo_1110 IPR017850 Alkaline-phosphatase-like, core domain Thimo_1111 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1111 IPR000639 Epoxide hydrolase-like Thimo_1111 IPR029058 Alpha/Beta hydrolase fold Thimo_1112 IPR025738 Aerotolerance-related protein BatD Thimo_1113 IPR011990 Tetratricopeptide-like helical domain Thimo_1113 IPR019734 Tetratricopeptide repeat Thimo_1114 IPR002035 von Willebrand factor, type A Thimo_1114 IPR036465 Thimo_1114 Thimo_1115 IPR002035 von Willebrand factor, type A Thimo_1115 IPR036465 Thimo_1115 Thimo_1116 IPR025489 Protein of unknown function (DUF4381 Thimo_1117 IPR002881 Domain of unknown function DUF58 Thimo_1117 IPR036465 Thimo_1117 Thimo_1118 IPR011703 ATPase, AAA-3 Thimo_1118 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1119 IPR000640 Translation elongation factor EFG, V domain Thimo_1119 IPR000795 Elongation factor, GTP-binding domain Thimo_1119 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Thimo_1119 IPR005225 Small GTP-binding protein domain Thimo_1119 IPR006298 GTP-binding protein TypA Thimo_1119 IPR009000 Translation protein, beta-barrel domain Thimo_1119 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1119 IPR031157 Thimo_1119 Thimo_1119 IPR035647 Thimo_1119 Thimo_1120 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_1120 IPR025875 Leucine rich repeat 4 Thimo_1120 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1120 IPR032171 Thimo_1120 Thimo_1120 IPR032675 Thimo_1120 Thimo_1120 IPR035897 Thimo_1120 Thimo_1122 IPR010921 Trp repressor/replication initiator Thimo_1123 IPR012337 Ribonuclease H-like domain Thimo_1123 IPR025948 HTH-like domain Thimo_1125 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thimo_1125 IPR036922 Thimo_1125 Thimo_1126 IPR001539 Peptidase U32 Thimo_1127 IPR001539 Peptidase U32 Thimo_1128 IPR005911 Conserved hypothetical protein CHP01212 Thimo_1128 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1128 IPR007197 Radical SAM Thimo_1128 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_1128 IPR032432 Thimo_1128 Thimo_1129 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1129 IPR000639 Epoxide hydrolase-like Thimo_1129 IPR017497 Putative magnesium chelatase accessory protein Thimo_1129 IPR029058 Alpha/Beta hydrolase fold Thimo_1130 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thimo_1130 IPR011611 Carbohydrate kinase PfkB Thimo_1130 IPR029056 Ribokinase-like Thimo_1131 IPR006379 HAD-superfamily hydrolase, subfamily IIB Thimo_1131 IPR006380 Sucrose-phosphate synthase Thimo_1131 IPR023214 HAD-like domain Thimo_1131 IPR036412 Thimo_1131 Thimo_1132 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain Thimo_1132 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site Thimo_1132 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase Thimo_1132 IPR029000 Cyclophilin-like domain Thimo_1133 IPR010126 Esterase, PHB depolymerase Thimo_1133 IPR029058 Alpha/Beta hydrolase fold Thimo_1134 IPR004776 Auxin efflux carrier Thimo_1135 IPR000847 Transcription regulator HTH, LysR Thimo_1135 IPR005119 LysR, substrate-binding Thimo_1135 IPR036388 Thimo_1135 Thimo_1135 IPR036390 Thimo_1135 Thimo_1136 IPR007036 Succinylglutamate desuccinylase/aspartoacylase Thimo_1137 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX Thimo_1137 IPR013651 ATP-grasp fold, RimK-type Thimo_1137 IPR013815 ATP-grasp fold, subdomain 1 Thimo_1137 IPR023533 Ribosomal S6 modification enzyme RimK Thimo_1138 IPR001872 Peptidase A8, signal peptidase II Thimo_1139 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_1139 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thimo_1139 IPR002301 Isoleucine-tRNA ligase Thimo_1139 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thimo_1139 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_1139 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase Thimo_1139 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thimo_1139 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1139 IPR023585 Isoleucine-tRNA ligase, type 1 Thimo_1140 IPR002606 Riboflavin kinase, bacterial Thimo_1140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1140 IPR015864 FAD synthetase Thimo_1140 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic Thimo_1140 IPR023465 Riboflavin kinase domain Thimo_1141 IPR004268 Flagellin assembly, membrane protein MviN Thimo_1142 IPR001296 Glycosyl transferase, family 1 Thimo_1142 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1143 IPR000160 GGDEF domain Thimo_1143 IPR001633 EAL domain Thimo_1143 IPR029787 Nucleotide cyclase Thimo_1143 IPR035919 Thimo_1143 Thimo_1144 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain Thimo_1144 IPR023614 Porin domain Thimo_1146 IPR016181 Acyl-CoA N-acyltransferase Thimo_1146 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted Thimo_1150 IPR004680 Citrate transporter-like domain Thimo_1150 IPR006037 Regulator of K+ conductance, C-terminal Thimo_1150 IPR031312 Thimo_1150 Thimo_1150 IPR036721 Thimo_1150 Thimo_1151 IPR013830 Thimo_1151 Thimo_1151 IPR036514 Thimo_1151 Thimo_1152 IPR005673 ABC transporter, phosphate-binding protein PstS Thimo_1152 IPR024370 PBP domain Thimo_1153 IPR000515 MetI-like domain Thimo_1153 IPR011864 Phosphate ABC transporter, permease protein PstC Thimo_1153 IPR035906 Thimo_1153 Thimo_1154 IPR000515 MetI-like domain Thimo_1154 IPR005672 Phosphate transport system permease protein PstA Thimo_1154 IPR035906 Thimo_1154 Thimo_1155 IPR003439 ABC transporter-like Thimo_1155 IPR003593 AAA+ ATPase domain Thimo_1155 IPR005670 Phosphate transport system permease protein 1 Thimo_1155 IPR017871 ABC transporter, conserved site Thimo_1155 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1156 IPR005673 ABC transporter, phosphate-binding protein PstS Thimo_1156 IPR024370 PBP domain Thimo_1157 IPR036597 Thimo_1157 Thimo_1158 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB Thimo_1158 IPR004488 Magnesium/cobalt transport protein CorA Thimo_1159 IPR003593 AAA+ ATPase domain Thimo_1159 IPR011703 ATPase, AAA-3 Thimo_1159 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1160 IPR002218 Glucose-inhibited division protein A-related Thimo_1160 IPR004416 Glucose-inhibited division protein A Thimo_1160 IPR020595 Glucose-inhibited division protein A-related, conserved site Thimo_1160 IPR026904 GidA associated domain 3 Thimo_1160 IPR036188 Thimo_1160 Thimo_1161 IPR003682 rRNA small subunit methyltransferase G Thimo_1161 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1162 IPR025669 AAA domain Thimo_1162 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1163 IPR003115 ParB/Sulfiredoxin Thimo_1163 IPR004437 ParB/RepB/Spo0J partition protein family Thimo_1163 IPR036086 Thimo_1163 Thimo_1164 IPR005598 ATP synthase protein I Thimo_1165 IPR000568 ATPase, F0 complex, subunit A Thimo_1165 IPR023011 ATPase, F0 complex, subunit A, active site Thimo_1165 IPR035908 Thimo_1165 Thimo_1166 IPR000454 ATPase, F0 complex, subunit C Thimo_1166 IPR002379 V-ATPase proteolipid subunit C-like domain Thimo_1166 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast Thimo_1166 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Thimo_1166 IPR035921 Thimo_1166 Thimo_1166 IPR038662 Thimo_1166 Thimo_1167 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast Thimo_1167 IPR005864 ATPase, F0 complex, subunit B, bacterial Thimo_1167 IPR028987 F-type ATP synthase subunit B-like, membrane domain Thimo_1168 IPR000711 ATPase, OSCP/delta subunit Thimo_1168 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Thimo_1169 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_1169 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal Thimo_1169 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Thimo_1169 IPR005294 ATPase, F1 complex, alpha subunit Thimo_1169 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_1169 IPR023366 ATP synthase subunit alpha-like domain Thimo_1169 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1169 IPR036121 Thimo_1169 Thimo_1169 IPR038376 Thimo_1169 Thimo_1170 IPR000131 ATPase, F1 complex, gamma subunit Thimo_1170 IPR023632 ATPase, F1 complex, gamma subunit conserved site Thimo_1170 IPR035968 Thimo_1170 Thimo_1171 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_1171 IPR003593 AAA+ ATPase domain Thimo_1171 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Thimo_1171 IPR005722 ATPase, F1 complex, beta subunit Thimo_1171 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_1171 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal Thimo_1171 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1171 IPR036121 Thimo_1171 Thimo_1172 IPR001469 ATPase, F1 complex, delta/epsilon subunit Thimo_1172 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal Thimo_1172 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain Thimo_1172 IPR036771 Thimo_1172 Thimo_1172 IPR036794 Thimo_1172 Thimo_1173 IPR001451 Bacterial transferase hexapeptide repeat Thimo_1173 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase Thimo_1173 IPR011004 Trimeric LpxA-like Thimo_1173 IPR025877 MobA-like NTP transferase domain Thimo_1173 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_1174 IPR001347 Sugar isomerase (SIS) Thimo_1174 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising Thimo_1174 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_1175 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain Thimo_1175 IPR017926 Glutamine amidotransferase Thimo_1175 IPR029062 Class I glutamine amidotransferase-like Thimo_1176 IPR000312 Glycosyl transferase, family 3 Thimo_1176 IPR005940 Anthranilate phosphoribosyl transferase Thimo_1176 IPR017459 Glycosyl transferase family 3, N-terminal domain Thimo_1176 IPR035902 Thimo_1176 Thimo_1176 IPR036320 Thimo_1176 Thimo_1177 IPR001468 Indole-3-glycerol phosphate synthase, conserved site Thimo_1177 IPR011060 Ribulose-phosphate binding barrel Thimo_1177 IPR013785 Aldolase-type TIM barrel Thimo_1177 IPR013798 Indole-3-glycerol phosphate synthase Thimo_1178 IPR000595 Cyclic nucleotide-binding domain Thimo_1178 IPR012318 Helix-turn-helix motif, Crp-type Thimo_1178 IPR014710 RmlC-like jelly roll fold Thimo_1178 IPR018335 Transcription regulator HTH, Crp-type, conserved site Thimo_1178 IPR018490 Cyclic nucleotide-binding-like Thimo_1178 IPR036388 Thimo_1178 Thimo_1178 IPR036390 Thimo_1178 Thimo_1179 IPR003718 OsmC/Ohr family Thimo_1179 IPR015946 K homology domain-like, alpha/beta Thimo_1179 IPR036102 Thimo_1179 Thimo_1180 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic Thimo_1180 IPR009165 S-adenosylmethionine decarboxylase, bacterial Thimo_1180 IPR016067 S-adenosylmethionine decarboxylase, core Thimo_1181 IPR009078 Ferritin-like superfamily Thimo_1181 IPR011566 Ubiquinone biosynthesis protein Coq7 Thimo_1182 IPR004017 Cysteine-rich domain Thimo_1182 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1182 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1183 IPR005822 Ribosomal protein L13 Thimo_1183 IPR005823 Ribosomal protein L13, bacterial-type Thimo_1183 IPR023563 Ribosomal protein L13, conserved site Thimo_1183 IPR036899 Thimo_1183 Thimo_1184 IPR000754 Ribosomal protein S9 Thimo_1184 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_1184 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_1184 IPR020574 Ribosomal protein S9, conserved site Thimo_1184 IPR023035 Ribosomal protein S9, bacterial/plastid Thimo_1186 IPR001702 Porin, Gram-negative type Thimo_1186 IPR002299 Porin, Neisseria sp. type Thimo_1187 IPR004788 Ribose 5-phosphate isomerase, type A Thimo_1187 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup Thimo_1187 IPR037171 Thimo_1187 Thimo_1188 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Thimo_1188 IPR001721 ACT-like domain Thimo_1188 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_1188 IPR005787 Threonine dehydratase, biosynthetic Thimo_1188 IPR036052 Thimo_1188 Thimo_1188 IPR038110 Thimo_1188 Thimo_1190 IPR002698 5-formyltetrahydrofolate cyclo-ligase Thimo_1190 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain Thimo_1190 IPR037171 Thimo_1190 Thimo_1192 IPR007838 Cell division protein ZapA-like Thimo_1192 IPR036192 Thimo_1192 Thimo_1193 IPR012662 Conserved hypothetical protein CHP02449 Thimo_1194 IPR011978 Uncharacterised protein family UPF0149 Thimo_1194 IPR036255 Thimo_1194 Thimo_1195 IPR000994 Peptidase M24, structural domain Thimo_1195 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Thimo_1195 IPR007865 Aminopeptidase P, N-terminal Thimo_1195 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Thimo_1195 IPR036005 Thimo_1195 Thimo_1196 IPR002938 Monooxygenase, FAD-binding Thimo_1196 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 Thimo_1196 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase Thimo_1196 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Thimo_1196 IPR036188 Thimo_1196 Thimo_1197 IPR002938 Monooxygenase, FAD-binding Thimo_1197 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 Thimo_1197 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site Thimo_1197 IPR036188 Thimo_1197 Thimo_1198 IPR000023 Phosphofructokinase domain Thimo_1198 IPR011404 Phosphofructokinase, XF0274 Thimo_1198 IPR022953 Phosphofructokinase Thimo_1198 IPR035966 Thimo_1198 Thimo_1199 IPR004131 Pyrophosphate-energised proton pump Thimo_1200 IPR008162 Inorganic pyrophosphatase Thimo_1200 IPR036649 Thimo_1200 Thimo_1201 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain Thimo_1201 IPR023045 Molybdenum cofactor biosynthesis C Thimo_1201 IPR036522 Thimo_1201 Thimo_1202 IPR020948 Phosphate-starvation-induced PsiE-like Thimo_1203 IPR006073 GTP binding domain Thimo_1203 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC Thimo_1203 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1205 IPR002891 Adenylylsulphate kinase Thimo_1205 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1206 IPR001451 Bacterial transferase hexapeptide repeat Thimo_1206 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family Thimo_1206 IPR011004 Trimeric LpxA-like Thimo_1206 IPR018357 Hexapeptide transferase, conserved site Thimo_1206 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 Thimo_1206 IPR037133 Thimo_1206 Thimo_1207 IPR004839 Aminotransferase, class I/classII Thimo_1207 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1207 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1207 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1207 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria Thimo_1208 IPR002818 ThiJ/PfpI Thimo_1208 IPR006286 Peptidase C56, PfpI Thimo_1208 IPR029062 Class I glutamine amidotransferase-like Thimo_1209 IPR009288 AIG2-like Thimo_1209 IPR036568 Thimo_1209 Thimo_1210 IPR003718 OsmC/Ohr family Thimo_1210 IPR015946 K homology domain-like, alpha/beta Thimo_1210 IPR036102 Thimo_1210 Thimo_1211 IPR006218 DAHP synthetase I/KDSA Thimo_1211 IPR006219 DHAP synthase, class 1 Thimo_1211 IPR013785 Aldolase-type TIM barrel Thimo_1212 IPR009056 Cytochrome c-like domain Thimo_1212 IPR024167 Cytochrome c4 Thimo_1212 IPR036909 Thimo_1212 Thimo_1213 IPR000788 Ribonucleotide reductase large subunit, C-terminal Thimo_1213 IPR005144 ATP-cone Thimo_1213 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal Thimo_1213 IPR013346 Ribonucleotide reductase, class I , alpha subunit Thimo_1213 IPR013509 Ribonucleotide reductase large subunit, N-terminal Thimo_1216 IPR001310 Histidine triad (HIT) protein Thimo_1216 IPR019808 Histidine triad, conserved site Thimo_1216 IPR036265 Thimo_1216 Thimo_1219 IPR003953 FAD binding domain Thimo_1219 IPR011803 Adenylylsulphate reductase, alpha subunit Thimo_1219 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thimo_1219 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Thimo_1219 IPR036188 Thimo_1219 Thimo_1219 IPR037099 Thimo_1219 Thimo_1220 IPR011802 Adenylylsulphate reductase, beta subunit Thimo_1220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1220 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal Thimo_1220 IPR038465 Thimo_1220 Thimo_1221 IPR036197 Thimo_1221 Thimo_1223 IPR000891 Pyruvate carboxyltransferase Thimo_1223 IPR013785 Aldolase-type TIM barrel Thimo_1224 IPR003807 Domain of unknown function DUF202 Thimo_1225 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Thimo_1225 IPR036754 Thimo_1225 Thimo_1226 IPR015590 Aldehyde dehydrogenase domain Thimo_1226 IPR016161 Aldehyde/histidinol dehydrogenase Thimo_1226 IPR016162 Aldehyde dehydrogenase, N-terminal Thimo_1227 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase Thimo_1227 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1227 IPR035107 Thimo_1227 Thimo_1228 IPR001036 Acriflavin resistance protein Thimo_1228 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_1229 IPR006143 RND efflux pump, membrane fusion protein Thimo_1229 IPR032317 Thimo_1229 Thimo_1230 IPR006597 Sel1-like Thimo_1230 IPR011990 Tetratricopeptide-like helical domain Thimo_1231 IPR000160 GGDEF domain Thimo_1231 IPR029151 Periplasmic sensor domain-like Thimo_1231 IPR029787 Nucleotide cyclase Thimo_1234 IPR015590 Aldehyde dehydrogenase domain Thimo_1234 IPR016160 Aldehyde dehydrogenase, cysteine active site Thimo_1234 IPR016161 Aldehyde/histidinol dehydrogenase Thimo_1234 IPR016162 Aldehyde dehydrogenase, N-terminal Thimo_1234 IPR016163 Aldehyde dehydrogenase, C-terminal Thimo_1235 IPR000362 Fumarate lyase family Thimo_1235 IPR008948 L-Aspartase-like Thimo_1235 IPR018951 Fumarase C, C-terminal Thimo_1235 IPR020557 Fumarate lyase, conserved site Thimo_1235 IPR022761 Fumarate lyase, N-terminal Thimo_1235 IPR024083 Fumarase/histidase, N-terminal Thimo_1236 IPR021738 Protein of unknown function DUF3309 Thimo_1238 IPR009875 PilZ domain Thimo_1240 IPR003445 Cation transporter Thimo_1240 IPR004772 Potassium uptake protein TrkH family Thimo_1241 IPR003148 Regulator of K+ conductance, N-terminal Thimo_1241 IPR006036 Potassium uptake protein TrkA Thimo_1241 IPR006037 Regulator of K+ conductance, C-terminal Thimo_1241 IPR036291 Thimo_1241 Thimo_1241 IPR036721 Thimo_1241 Thimo_1242 IPR000641 CbxX/CfqX Thimo_1242 IPR001789 Signal transduction response regulator, receiver domain Thimo_1242 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_1242 IPR002197 DNA binding HTH domain, Fis-type Thimo_1242 IPR003593 AAA+ ATPase domain Thimo_1242 IPR009057 Homeodomain-like Thimo_1242 IPR011006 CheY-like superfamily Thimo_1242 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_1242 IPR025944 Sigma-54 interaction domain, conserved site Thimo_1242 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1243 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1243 IPR003660 HAMP linker domain Thimo_1243 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_1243 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_1243 IPR013656 PAS fold-4 Thimo_1243 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator Thimo_1243 IPR035965 Thimo_1243 Thimo_1243 IPR036097 Thimo_1243 Thimo_1243 IPR036890 Thimo_1243 Thimo_1244 IPR025500 Protein of unknown function DUF4390 Thimo_1245 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p Thimo_1245 IPR004573 rRNA small subunit methyltransferase B Thimo_1245 IPR006027 NusB/RsmB/TIM44 Thimo_1245 IPR023267 RNA (C5-cytosine) methyltransferase Thimo_1245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1245 IPR035926 Thimo_1245 Thimo_1246 IPR002376 Formyl transferase, N-terminal Thimo_1246 IPR005793 Formyl transferase, C-terminal Thimo_1246 IPR005794 Methionyl-tRNA formyltransferase Thimo_1246 IPR011034 Formyl transferase, C-terminal-like Thimo_1246 IPR036477 Thimo_1246 Thimo_1246 IPR037022 Thimo_1246 Thimo_1247 IPR023635 Peptide deformylase Thimo_1247 IPR036821 Thimo_1247 Thimo_1248 IPR018392 LysM domain Thimo_1248 IPR036779 Thimo_1248 Thimo_1249 IPR003488 DNA recombination-mediator protein A Thimo_1249 IPR010994 RuvA domain 2-like Thimo_1249 IPR036388 Thimo_1249 Thimo_1250 IPR007456 Protein of unknown function DUF494 Thimo_1251 IPR002059 Cold-shock protein, DNA-binding Thimo_1251 IPR008613 Excalibur calcium-binding domain Thimo_1251 IPR011129 Cold shock protein Thimo_1251 IPR012340 Nucleic acid-binding, OB-fold Thimo_1252 IPR001626 ABC-3 Thimo_1252 IPR037294 Thimo_1252 Thimo_1253 IPR001626 ABC-3 Thimo_1253 IPR037294 Thimo_1253 Thimo_1254 IPR003439 ABC transporter-like Thimo_1254 IPR003593 AAA+ ATPase domain Thimo_1254 IPR017871 ABC transporter, conserved site Thimo_1254 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1255 IPR006127 Periplasmic solute binding protein family Thimo_1255 IPR006128 Adhesion lipoprotein Thimo_1255 IPR006129 Adhesin B Thimo_1256 IPR003601 DNA topoisomerase, type IA, domain 2 Thimo_1256 IPR003602 DNA topoisomerase, type IA, DNA-binding domain Thimo_1256 IPR005733 DNA topoisomerase I, bacterial-type Thimo_1256 IPR006171 Toprim domain Thimo_1256 IPR013497 DNA topoisomerase, type IA, central Thimo_1256 IPR013498 DNA topoisomerase, type IA, zn finger Thimo_1256 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Thimo_1256 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Thimo_1256 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Thimo_1256 IPR023405 DNA topoisomerase, type IA, core domain Thimo_1256 IPR023406 DNA topoisomerase, type IA, active site Thimo_1256 IPR028612 DNA topoisomerase I, type IA Thimo_1257 IPR006070 YrdC-like domain Thimo_1257 IPR017945 DHBP synthase RibB-like alpha/beta domain Thimo_1257 IPR023535 Threonylcarbamoyl-AMP synthase Thimo_1259 IPR032690 Thimo_1259 Thimo_1260 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Thimo_1260 IPR029052 Metallo-dependent phosphatase-like Thimo_1261 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_1261 IPR013115 Histidine biosynthesis HisG, C-terminal Thimo_1261 IPR013820 ATP phosphoribosyltransferase, catalytic domain Thimo_1261 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_1261 IPR020621 ATP phosphoribosyltransferase HisG, long form Thimo_1263 IPR000189 Prokaryotic transglycosylase, active site Thimo_1263 IPR008258 Lytic transglycosylase-like SLT domain Thimo_1263 IPR023346 Lysozyme-like domain Thimo_1264 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_1264 IPR018129 Phosphoenolpyruvate carboxylase, active site Thimo_1264 IPR021135 Phosphoenolpyruvate carboxylase Thimo_1264 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type Thimo_1264 IPR033129 Thimo_1264 Thimo_1265 IPR003445 Cation transporter Thimo_1265 IPR004772 Potassium uptake protein TrkH family Thimo_1266 IPR005346 RnfH protein Thimo_1266 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thimo_1266 IPR037021 Thimo_1266 Thimo_1267 IPR003667 Electron transport complex, Rnf/Nqr Thimo_1267 IPR010968 Electron transport complex, RnfE Thimo_1268 IPR007329 FMN-binding Thimo_1268 IPR010209 Electron transport complex, RnfG Thimo_1269 IPR004338 NADH-quinone reductase NQR2/RnfD Thimo_1269 IPR011303 Electron transport complex, RnfD Thimo_1270 IPR009051 Alpha-helical ferredoxin Thimo_1270 IPR010208 Electron transport complex protein RnfC Thimo_1270 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Thimo_1270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1270 IPR019554 Soluble ligand binding domain Thimo_1270 IPR026902 RnfC Barrel sandwich hybrid domain Thimo_1270 IPR037225 Thimo_1270 Thimo_1271 IPR007202 4Fe-4S domain Thimo_1271 IPR010207 Electron transport complex, RnfB Thimo_1271 IPR016463 Electron transport complex, RnfB, Proteobacteria Thimo_1271 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1272 IPR003667 Electron transport complex, Rnf/Nqr Thimo_1272 IPR011293 Electron transport complex, RnfA Thimo_1273 IPR000014 PAS domain Thimo_1273 IPR001610 PAC motif Thimo_1273 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1273 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_1273 IPR013767 PAS fold Thimo_1273 IPR014285 Nitrogen fixation negative regulator NifL Thimo_1273 IPR035965 Thimo_1273 Thimo_1273 IPR036890 Thimo_1273 Thimo_1274 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_1274 IPR002197 DNA binding HTH domain, Fis-type Thimo_1274 IPR003018 GAF domain Thimo_1274 IPR003593 AAA+ ATPase domain Thimo_1274 IPR010113 Nif-specific regulatory protein Thimo_1274 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_1274 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_1274 IPR025944 Sigma-54 interaction domain, conserved site Thimo_1274 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1274 IPR029016 GAF domain-like Thimo_1275 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Thimo_1275 IPR021127 CRISPR associated protein Cas2 Thimo_1276 IPR002729 CRISPR-associated protein Cas1 Thimo_1276 IPR011604 Exonuclease, phage-type/RecB, C-terminal Thimo_1276 IPR013343 CRISPR-associated protein Cas4 Thimo_1276 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Thimo_1278 IPR006483 CRISPR-associated Cas3-HD domain Thimo_1278 IPR013444 Helicase Cas3, CRISPR-associated, Anaes-subtype Thimo_1278 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1278 IPR038257 Thimo_1278 Thimo_1279 IPR019089 CRISPR-associated protein, GSU0054 Thimo_1280 IPR013403 CRISPR-associated protein GSU0053 Thimo_1281 IPR013196 Helix-turn-helix, type 11 Thimo_1281 IPR026881 WYL domain Thimo_1281 IPR036388 Thimo_1281 Thimo_1282 IPR039567 Thimo_1282 Thimo_1283 IPR002716 PIN domain Thimo_1283 IPR029060 PIN domain-like Thimo_1284 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_1284 IPR036165 Thimo_1284 Thimo_1285 IPR021804 Protein of unknown function DUF3375 Thimo_1286 IPR025449 Protein of unknown function DUF4194 Thimo_1287 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1288 IPR014544 Uncharacterised conserved protein UCP028408 Thimo_1288 IPR024534 Domain of unknown function DUF2220 Thimo_1288 IPR024537 Domain of unknown function DUF3322 Thimo_1290 IPR000649 Initiation factor 2B-related Thimo_1290 IPR005251 Methylthioribose-1-phosphate isomerase Thimo_1290 IPR011559 Initiation factor 2B alpha/beta/delta Thimo_1290 IPR037171 Thimo_1290 Thimo_1291 IPR006680 Amidohydrolase 1 Thimo_1291 IPR011059 Metal-dependent hydrolase, composite domain Thimo_1291 IPR023512 5-methylthioadenosine/S-adenosylhomocysteine deaminase Thimo_1291 IPR032466 Thimo_1291 Thimo_1292 IPR012337 Ribonuclease H-like domain Thimo_1292 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_1292 IPR036397 Thimo_1292 Thimo_1293 IPR000644 CBS domain Thimo_1293 IPR005105 Protein-PII uridylyltransferase, N-terminal Thimo_1293 IPR014710 RmlC-like jelly roll fold Thimo_1293 IPR018490 Cyclic nucleotide-binding-like Thimo_1293 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Thimo_1294 IPR001734 Sodium/solute symporter Thimo_1294 IPR019899 Sodium/solute symporter, VC2705 subfamily Thimo_1294 IPR038377 Thimo_1294 Thimo_1295 IPR019886 Sodium symporter small subunit, predicted Thimo_1296 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site Thimo_1296 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_1296 IPR004450 Threonine synthase-like Thimo_1296 IPR029144 Threonine synthase, N-terminal Thimo_1296 IPR036052 Thimo_1296 Thimo_1296 IPR037158 Thimo_1296 Thimo_1297 IPR000891 Pyruvate carboxyltransferase Thimo_1297 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thimo_1297 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thimo_1297 IPR013785 Aldolase-type TIM barrel Thimo_1297 IPR036230 Thimo_1297 Thimo_1299 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Thimo_1299 IPR005743 DNA gyrase, subunit A Thimo_1299 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Thimo_1299 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain Thimo_1299 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta Thimo_1299 IPR013760 DNA topoisomerase, type IIA-like domain Thimo_1299 IPR035516 Thimo_1299 Thimo_1300 IPR000192 Aminotransferase class V domain Thimo_1300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1300 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1300 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1300 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Thimo_1300 IPR022278 Phosphoserine aminotransferase Thimo_1301 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thimo_1301 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain Thimo_1301 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Thimo_1301 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Thimo_1301 IPR036291 Thimo_1301 Thimo_1302 IPR001086 Prephenate dehydratase Thimo_1302 IPR002701 Chorismate mutase Thimo_1302 IPR002912 ACT domain Thimo_1302 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase Thimo_1302 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain Thimo_1302 IPR018528 Prephenate dehydratase, conserved site Thimo_1302 IPR036263 Thimo_1302 Thimo_1302 IPR036979 Thimo_1302 Thimo_1303 IPR004839 Aminotransferase, class I/classII Thimo_1303 IPR005861 Histidinol-phosphate aminotransferase family Thimo_1303 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1303 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1303 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1304 IPR003099 Prephenate dehydrogenase Thimo_1304 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_1304 IPR036291 Thimo_1304 Thimo_1305 IPR004680 Citrate transporter-like domain Thimo_1307 IPR001584 Integrase, catalytic core Thimo_1307 IPR002514 Transposase IS3/IS911family Thimo_1307 IPR009057 Homeodomain-like Thimo_1309 IPR004680 Citrate transporter-like domain Thimo_1309 IPR006037 Regulator of K+ conductance, C-terminal Thimo_1309 IPR036721 Thimo_1309 Thimo_1310 IPR006016 UspA Thimo_1310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1311 IPR006015 Universal stress protein A Thimo_1311 IPR006016 UspA Thimo_1311 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1313 IPR000092 Polyprenyl synthetase Thimo_1313 IPR008949 Terpenoid synthase Thimo_1314 IPR001787 Ribosomal protein L21 Thimo_1314 IPR018258 Ribosomal protein L21, conserved site Thimo_1314 IPR028909 Ribosomal protein L21-like Thimo_1314 IPR036164 Thimo_1314 Thimo_1315 IPR001684 Ribosomal protein L27 Thimo_1315 IPR018261 Ribosomal protein L27, conserved site Thimo_1316 IPR006073 GTP binding domain Thimo_1316 IPR006074 GTP1/OBG, conserved site Thimo_1316 IPR006169 GTP1/OBG domain Thimo_1316 IPR014100 GTP-binding protein Obg/CgtA Thimo_1316 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1316 IPR035101 Thimo_1316 Thimo_1316 IPR036726 Thimo_1316 Thimo_1317 IPR001048 Aspartate/glutamate/uridylate kinase Thimo_1317 IPR001057 Glutamate/acetylglutamate kinase Thimo_1317 IPR002478 PUA domain Thimo_1317 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase Thimo_1317 IPR011529 Glutamate 5-kinase Thimo_1317 IPR015947 PUA-like domain Thimo_1317 IPR019797 Glutamate 5-kinase, conserved site Thimo_1317 IPR036393 Thimo_1317 Thimo_1317 IPR036974 Thimo_1317 Thimo_1318 IPR006054 DNA polymerase III, epsilon subunit Thimo_1318 IPR006309 DNA polymerase 3, epsilon subunit Thimo_1318 IPR012337 Ribonuclease H-like domain Thimo_1318 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_1318 IPR036397 Thimo_1318 Thimo_1319 IPR000595 Cyclic nucleotide-binding domain Thimo_1319 IPR012318 Helix-turn-helix motif, Crp-type Thimo_1319 IPR014710 RmlC-like jelly roll fold Thimo_1319 IPR018335 Transcription regulator HTH, Crp-type, conserved site Thimo_1319 IPR018490 Cyclic nucleotide-binding-like Thimo_1319 IPR036388 Thimo_1319 Thimo_1319 IPR036390 Thimo_1319 Thimo_1320 IPR035173 Thimo_1320 Thimo_1321 IPR004468 CTP synthase Thimo_1321 IPR017456 CTP synthase, N-terminal Thimo_1321 IPR017926 Glutamine amidotransferase Thimo_1321 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1321 IPR029062 Class I glutamine amidotransferase-like Thimo_1322 IPR006218 DAHP synthetase I/KDSA Thimo_1322 IPR006269 3-deoxy-8-phosphooctulonate synthase Thimo_1322 IPR013785 Aldolase-type TIM barrel Thimo_1323 IPR000941 Enolase Thimo_1323 IPR020809 Enolase, conserved site Thimo_1323 IPR020810 Enolase, C-terminal Thimo_1323 IPR020811 Enolase, N-terminal Thimo_1323 IPR029017 Enolase N-terminal domain-like Thimo_1323 IPR036849 Thimo_1323 Thimo_1324 IPR007060 Septum formation initiator FtsL/DivIC Thimo_1324 IPR023081 Cell division protein FtsB Thimo_1325 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Thimo_1325 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site Thimo_1325 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_1325 IPR034683 Thimo_1325 Thimo_1326 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Thimo_1326 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site Thimo_1326 IPR036571 Thimo_1326 Thimo_1327 IPR001656 Pseudouridine synthase, TruD Thimo_1327 IPR020103 Pseudouridine synthase, catalytic domain Thimo_1327 IPR020119 Pseudouridine synthase TruD, conserved site Thimo_1328 IPR002625 Smr protein/MutS2 C-terminal Thimo_1328 IPR036063 Thimo_1328 Thimo_1329 IPR002828 Survival protein SurE-like phosphatase/nucleotidase Thimo_1329 IPR030048 Thimo_1329 Thimo_1329 IPR036523 Thimo_1329 Thimo_1330 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Thimo_1330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1331 IPR032816 Thimo_1331 Thimo_1332 IPR011055 Duplicated hybrid motif Thimo_1332 IPR016047 Peptidase M23 Thimo_1332 IPR018392 LysM domain Thimo_1332 IPR036779 Thimo_1332 Thimo_1333 IPR000943 RNA polymerase sigma-70 Thimo_1333 IPR007624 RNA polymerase sigma-70 region 3 Thimo_1333 IPR007627 RNA polymerase sigma-70 region 2 Thimo_1333 IPR007630 RNA polymerase sigma-70 region 4 Thimo_1333 IPR009042 RNA polymerase sigma-70 region 1.2 Thimo_1333 IPR012761 RNA polymerase sigma factor RpoS Thimo_1333 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_1333 IPR013325 RNA polymerase sigma factor, region 2 Thimo_1333 IPR014284 RNA polymerase sigma-70 like domain Thimo_1333 IPR036388 Thimo_1333 Thimo_1335 IPR002934 Nucleotidyl transferase domain Thimo_1337 IPR011990 Tetratricopeptide-like helical domain Thimo_1337 IPR013568 SEFIR Thimo_1337 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1337 IPR035897 Thimo_1337 Thimo_1338 IPR000883 Cytochrome c oxidase subunit I Thimo_1338 IPR004677 Cytochrome c oxidase cbb3-type, subunit I Thimo_1338 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site Thimo_1338 IPR036927 Thimo_1338 Thimo_1339 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Thimo_1339 IPR036909 Thimo_1339 Thimo_1340 IPR008621 Cbb3-type cytochrome oxidase component Thimo_1341 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Thimo_1341 IPR008168 Cytochrome c, class IC Thimo_1341 IPR009056 Cytochrome c-like domain Thimo_1341 IPR032858 Thimo_1341 Thimo_1341 IPR036909 Thimo_1341 Thimo_1341 IPR038414 Thimo_1341 Thimo_1342 IPR013783 Immunoglobulin-like fold Thimo_1342 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG Thimo_1342 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1342 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1342 IPR032879 Thimo_1342 Thimo_1343 IPR008620 FixH Thimo_1344 IPR001757 Cation-transporting P-type ATPase Thimo_1344 IPR006121 Heavy metal-associated domain, HMA Thimo_1344 IPR008250 P-type ATPase, A domain Thimo_1344 IPR017969 Heavy-metal-associated, conserved site Thimo_1344 IPR018303 P-type ATPase, phosphorylation site Thimo_1344 IPR021993 Putative metal-binding domain of cation transport ATPase Thimo_1344 IPR023214 HAD-like domain Thimo_1344 IPR023298 P-type ATPase, transmembrane domain Thimo_1344 IPR023299 P-type ATPase, cytoplasmic domain N Thimo_1344 IPR027256 Cation-transporting P-type ATPase, subfamily IB Thimo_1344 IPR036163 Thimo_1344 Thimo_1344 IPR036412 Thimo_1344 Thimo_1345 IPR004714 Cytochrome oxidase maturation protein cbb3-type Thimo_1346 IPR003698 Lipoyl synthase Thimo_1346 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1346 IPR007197 Radical SAM Thimo_1346 IPR013785 Aldolase-type TIM barrel Thimo_1346 IPR031691 Thimo_1346 Thimo_1347 IPR004619 Type III pantothenate kinase Thimo_1348 IPR001296 Glycosyl transferase, family 1 Thimo_1348 IPR006380 Sucrose-phosphate synthase Thimo_1348 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain Thimo_1348 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain Thimo_1348 IPR023214 HAD-like domain Thimo_1348 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1348 IPR036412 Thimo_1348 Thimo_1349 IPR005247 YbhB/YbcL Thimo_1349 IPR008914 Phosphatidylethanolamine-binding protein PEBP Thimo_1349 IPR036610 Thimo_1349 Thimo_1350 IPR011990 Tetratricopeptide-like helical domain Thimo_1350 IPR013105 Tetratricopeptide TPR2 Thimo_1350 IPR017560 Cytochrome c-type biogenesis protein CcmI Thimo_1350 IPR019734 Tetratricopeptide repeat Thimo_1351 IPR005616 Cytochrome C biogenesis protein CcmH Thimo_1351 IPR038297 Thimo_1351 Thimo_1352 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE Thimo_1352 IPR013740 Redoxin Thimo_1352 IPR017937 Thioredoxin, conserved site Thimo_1352 IPR036249 Thimo_1352 Thimo_1353 IPR002541 Cytochrome c assembly protein Thimo_1353 IPR003567 Cytochrome c-type biogenesis protein Thimo_1353 IPR003568 Cytochrome c-type biogenesis protein CcmF Thimo_1353 IPR032523 Thimo_1353 Thimo_1354 IPR004329 CcmE/CycJ protein Thimo_1354 IPR036127 Thimo_1354 Thimo_1355 IPR007078 Haem exporter protein D (CcmD) Thimo_1356 IPR002541 Cytochrome c assembly protein Thimo_1356 IPR003557 Cytochrome c-type biogenesis protein CcmC Thimo_1357 IPR003544 Cytochrome c-type biogenesis protein CcmB Thimo_1357 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Thimo_1358 IPR003439 ABC transporter-like Thimo_1358 IPR003593 AAA+ ATPase domain Thimo_1358 IPR005895 ABC transporter, haem export, CcmA Thimo_1358 IPR017871 ABC transporter, conserved site Thimo_1358 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1359 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase Thimo_1359 IPR022417 Porphobilinogen deaminase, N-terminal Thimo_1359 IPR022418 Porphobilinogen deaminase, C-terminal Thimo_1359 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site Thimo_1359 IPR036803 Thimo_1359 Thimo_1360 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase Thimo_1360 IPR036108 Thimo_1360 Thimo_1361 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Thimo_1361 IPR036291 Thimo_1361 Thimo_1363 IPR039567 Thimo_1363 Thimo_1364 IPR039567 Thimo_1364 Thimo_1365 IPR002830 UbiD decarboxylyase family Thimo_1365 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Thimo_1366 IPR001567 Peptidase M3A/M3B Thimo_1366 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Thimo_1367 IPR014861 Uncharacterised domain CNP1 Thimo_1368 IPR001451 Bacterial transferase hexapeptide repeat Thimo_1368 IPR011004 Trimeric LpxA-like Thimo_1369 IPR003399 Mammalian cell entry-related Thimo_1371 IPR005219 Conserved hypothetical protein CHP00155 Thimo_1371 IPR007498 Paraquat-inducible protein A Thimo_1372 IPR002579 Peptide methionine sulphoxide reductase MrsB Thimo_1372 IPR011057 Mss4-like Thimo_1373 IPR010634 Protein of unknown function DUF1223 Thimo_1373 IPR036249 Thimo_1373 Thimo_1374 IPR001533 Transcriptional coactivator/pterin dehydratase Thimo_1374 IPR036428 Thimo_1374 Thimo_1375 IPR005126 NapC/NirT cytochrome c, N-terminal Thimo_1375 IPR024717 Denitrification system component NapC/NirT/NrfH Thimo_1375 IPR036280 Thimo_1375 Thimo_1375 IPR038266 Thimo_1375 Thimo_1376 IPR023155 Cytochrome c-552/4 Thimo_1376 IPR036280 Thimo_1376 Thimo_1378 IPR003000 Sirtuin family Thimo_1378 IPR026591 Sirtuin family, catalytic core small domain Thimo_1378 IPR027546 Sirtuin, class III Thimo_1378 IPR029035 DHS-like NAD/FAD-binding domain Thimo_1380 IPR004386 Toxin-antitoxin system, YafQ-like toxin Thimo_1380 IPR035093 Thimo_1380 Thimo_1381 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_1381 IPR036165 Thimo_1381 Thimo_1382 IPR009317 ChaB Thimo_1382 IPR037205 Thimo_1382 Thimo_1383 IPR005025 NADPH-dependent FMN reductase-like Thimo_1383 IPR010089 Flavoprotein WrbA Thimo_1383 IPR029039 Flavoprotein-like Thimo_1383 IPR037513 Thimo_1383 Thimo_1385 IPR007899 CHAD Thimo_1385 IPR038186 Thimo_1385 Thimo_1386 IPR001789 Signal transduction response regulator, receiver domain Thimo_1386 IPR011006 CheY-like superfamily Thimo_1387 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1387 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_1387 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_1387 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain Thimo_1387 IPR036097 Thimo_1387 Thimo_1387 IPR036890 Thimo_1387 Thimo_1388 IPR002008 DNA polymerase family X, beta-like Thimo_1388 IPR002054 DNA-directed DNA polymerase X Thimo_1388 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thimo_1388 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thimo_1388 IPR010996 DNA polymerase beta-like, N-terminal domain Thimo_1388 IPR016195 Polymerase/histidinol phosphatase-like Thimo_1388 IPR022311 Uncharacterised conserved protein UCP005047, YshC Thimo_1388 IPR027421 DNA polymerase family X lyase domain Thimo_1388 IPR028207 DNA polymerase beta, palm domain Thimo_1388 IPR029398 DNA polymerase beta, thumb domain Thimo_1388 IPR037160 Thimo_1388 Thimo_1389 IPR005952 Phosphoglycerate mutase 1 Thimo_1389 IPR013078 Histidine phosphatase superfamily, clade-1 Thimo_1389 IPR029033 Histidine phosphatase superfamily Thimo_1390 IPR009078 Ferritin-like superfamily Thimo_1390 IPR030907 Thimo_1390 Thimo_1391 IPR007544 Peptidase U56 family Thimo_1392 IPR025509 Domain of unknown function DUF4396 Thimo_1393 IPR006037 Regulator of K+ conductance, C-terminal Thimo_1393 IPR036721 Thimo_1393 Thimo_1394 IPR003416 MgtC/SapB/SrpB transporter Thimo_1394 IPR025105 Domain of unknown function DUF4010 Thimo_1395 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_1395 IPR025526 DsrC-like domain Thimo_1396 IPR004837 Sodium/calcium exchanger membrane region Thimo_1397 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 Thimo_1397 IPR009051 Alpha-helical ferredoxin Thimo_1397 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1397 IPR028261 Dihydroprymidine dehydrogenase domain II Thimo_1397 IPR036188 Thimo_1397 Thimo_1398 IPR011990 Tetratricopeptide-like helical domain Thimo_1398 IPR024983 CHAT domain Thimo_1398 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1399 IPR001789 Signal transduction response regulator, receiver domain Thimo_1399 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_1399 IPR002197 DNA binding HTH domain, Fis-type Thimo_1399 IPR003593 AAA+ ATPase domain Thimo_1399 IPR009057 Homeodomain-like Thimo_1399 IPR011006 CheY-like superfamily Thimo_1399 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_1399 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_1399 IPR025944 Sigma-54 interaction domain, conserved site Thimo_1399 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1400 IPR000644 CBS domain Thimo_1402 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_1402 IPR036097 Thimo_1402 Thimo_1403 IPR005720 Dihydroorotate dehydrogenase domain Thimo_1403 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Thimo_1403 IPR013785 Aldolase-type TIM barrel Thimo_1404 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain Thimo_1404 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal Thimo_1404 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_1404 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thimo_1404 IPR011895 Pyruvate-flavodoxin oxidoreductase Thimo_1404 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1404 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain Thimo_1404 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain Thimo_1404 IPR029061 Thiamin diphosphate-binding fold Thimo_1404 IPR033412 Thimo_1404 Thimo_1405 IPR002129 Pyridoxal phosphate-dependent decarboxylase Thimo_1405 IPR010107 Glutamate decarboxylase Thimo_1405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1405 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1406 IPR000182 GNAT domain Thimo_1406 IPR006464 Ribosomal-protein-alanine acetyltransferase Thimo_1406 IPR016181 Acyl-CoA N-acyltransferase Thimo_1407 IPR018698 VWA-like domain Thimo_1407 IPR025154 Putative metallopeptidase domain Thimo_1408 IPR003593 AAA+ ATPase domain Thimo_1408 IPR003959 ATPase, AAA-type, core Thimo_1408 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1412 IPR022254 Protein of unknown function DUF3775 Thimo_1413 IPR001915 Peptidase M48 Thimo_1414 IPR001296 Glycosyl transferase, family 1 Thimo_1414 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1415 IPR001296 Glycosyl transferase, family 1 Thimo_1415 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1416 IPR001296 Glycosyl transferase, family 1 Thimo_1416 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1417 IPR001296 Glycosyl transferase, family 1 Thimo_1417 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1420 IPR002514 Transposase IS3/IS911family Thimo_1420 IPR009057 Homeodomain-like Thimo_1421 IPR001584 Integrase, catalytic core Thimo_1421 IPR009057 Homeodomain-like Thimo_1421 IPR012337 Ribonuclease H-like domain Thimo_1421 IPR036397 Thimo_1421 Thimo_1422 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 Thimo_1422 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Thimo_1422 IPR032877 Thimo_1422 Thimo_1423 IPR000863 Sulfotransferase domain Thimo_1423 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1424 IPR009057 Homeodomain-like Thimo_1429 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_1429 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_1430 IPR003838 Permease FtsX-like Thimo_1430 IPR025857 MacB-like periplasmic core domain Thimo_1431 IPR003838 Permease FtsX-like Thimo_1431 IPR025857 MacB-like periplasmic core domain Thimo_1432 IPR003439 ABC transporter-like Thimo_1432 IPR003593 AAA+ ATPase domain Thimo_1432 IPR017871 ABC transporter, conserved site Thimo_1432 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1433 IPR006143 RND efflux pump, membrane fusion protein Thimo_1433 IPR032317 Thimo_1433 Thimo_1436 IPR001227 Acyl transferase domain Thimo_1436 IPR004136 2-nitropropane dioxygenase, NPD Thimo_1436 IPR009081 Acyl carrier protein-like Thimo_1436 IPR013785 Aldolase-type TIM barrel Thimo_1436 IPR013968 Polyketide synthase, KR Thimo_1436 IPR014030 Beta-ketoacyl synthase, N-terminal Thimo_1436 IPR014031 Beta-ketoacyl synthase, C-terminal Thimo_1436 IPR014043 Acyl transferase Thimo_1436 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_1436 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Thimo_1436 IPR016039 Thiolase-like Thimo_1436 IPR018201 Beta-ketoacyl synthase, active site Thimo_1436 IPR020801 Polyketide synthase, acyl transferase domain Thimo_1436 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thimo_1436 IPR036291 Thimo_1436 Thimo_1436 IPR036736 Thimo_1436 Thimo_1437 IPR001227 Acyl transferase domain Thimo_1437 IPR004568 Phosphopantethiene-protein transferase domain Thimo_1437 IPR008278 4'-phosphopantetheinyl transferase superfamily Thimo_1437 IPR014030 Beta-ketoacyl synthase, N-terminal Thimo_1437 IPR014031 Beta-ketoacyl synthase, C-terminal Thimo_1437 IPR014043 Acyl transferase Thimo_1437 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_1437 IPR016039 Thiolase-like Thimo_1437 IPR018201 Beta-ketoacyl synthase, active site Thimo_1437 IPR020801 Polyketide synthase, acyl transferase domain Thimo_1437 IPR020807 Polyketide synthase, dehydratase domain Thimo_1437 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thimo_1437 IPR037143 Thimo_1437 Thimo_1438 IPR036736 Thimo_1438 Thimo_1439 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase Thimo_1439 IPR006326 UDP-glycosyltransferase, MGT Thimo_1439 IPR022357 Major intrinsic protein, conserved site Thimo_1440 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1441 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1441 IPR029058 Alpha/Beta hydrolase fold Thimo_1442 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1442 IPR029058 Alpha/Beta hydrolase fold Thimo_1444 IPR000531 TonB-dependent receptor, beta-barrel Thimo_1444 IPR010101 TonB-dependent vitamin B12 transporter BtuB Thimo_1444 IPR012910 TonB-dependent receptor, plug Thimo_1444 IPR036942 Thimo_1444 Thimo_1444 IPR037066 Thimo_1444 Thimo_1446 IPR032816 Thimo_1446 Thimo_1447 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_1447 IPR018763 Protein of unknown function DUF2334 Thimo_1448 IPR001296 Glycosyl transferase, family 1 Thimo_1448 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1449 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1450 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1450 IPR007197 Radical SAM Thimo_1450 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_1451 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1451 IPR007197 Radical SAM Thimo_1451 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_1454 IPR000847 Transcription regulator HTH, LysR Thimo_1454 IPR005119 LysR, substrate-binding Thimo_1454 IPR036388 Thimo_1454 Thimo_1454 IPR036390 Thimo_1454 Thimo_1455 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal Thimo_1455 IPR006276 Cobalamin-independent methionine synthase Thimo_1455 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal Thimo_1455 IPR038071 Thimo_1455 Thimo_1456 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Thimo_1456 IPR035907 Thimo_1456 Thimo_1457 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thimo_1457 IPR036938 Thimo_1457 Thimo_1458 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1459 IPR002123 Phospholipid/glycerol acyltransferase Thimo_1460 IPR016181 Acyl-CoA N-acyltransferase Thimo_1461 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial Thimo_1461 IPR023214 HAD-like domain Thimo_1461 IPR036412 Thimo_1461 Thimo_1462 IPR000086 NUDIX hydrolase domain Thimo_1462 IPR015797 NUDIX hydrolase domain-like Thimo_1462 IPR020084 NUDIX hydrolase, conserved site Thimo_1462 IPR022927 RNA pyrophosphohydrolase RppH Thimo_1463 IPR000121 PEP-utilising enzyme, C-terminal Thimo_1463 IPR003018 GAF domain Thimo_1463 IPR006318 Phosphoenolpyruvate-utilising enzyme Thimo_1463 IPR008279 PEP-utilising enzyme, mobile domain Thimo_1463 IPR008731 Phosphotransferase system, enzyme I N-terminal Thimo_1463 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_1463 IPR023151 PEP-utilising enzyme, conserved site Thimo_1463 IPR029016 GAF domain-like Thimo_1463 IPR036618 Thimo_1463 Thimo_1463 IPR036637 Thimo_1463 Thimo_1464 IPR004113 FAD-linked oxidase, C-terminal Thimo_1464 IPR006094 FAD linked oxidase, N-terminal Thimo_1464 IPR016164 FAD-linked oxidase-like, C-terminal Thimo_1464 IPR016167 FAD-binding, type 2, subdomain 1 Thimo_1464 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_1464 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thimo_1464 IPR036318 Thimo_1464 Thimo_1465 IPR007055 BON domain Thimo_1466 IPR003509 Uncharacterised protein family UPF0102 Thimo_1466 IPR011335 Restriction endonuclease type II-like Thimo_1466 IPR011856 tRNA endonuclease-like domain Thimo_1467 IPR000878 Tetrapyrrole methylase Thimo_1467 IPR008189 rRNA small subunit methyltransferase I Thimo_1467 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_1467 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_1467 IPR018063 SAM-dependent methyltransferase RsmI, conserved site Thimo_1467 IPR035996 Thimo_1467 Thimo_1468 IPR000362 Fumarate lyase family Thimo_1468 IPR004769 Adenylosuccinate lyase Thimo_1468 IPR008948 L-Aspartase-like Thimo_1468 IPR013539 Adenylosuccinate lyase PurB, C-terminal Thimo_1468 IPR020557 Fumarate lyase, conserved site Thimo_1468 IPR022761 Fumarate lyase, N-terminal Thimo_1468 IPR024083 Fumarase/histidase, N-terminal Thimo_1469 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Thimo_1469 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Thimo_1469 IPR006249 Aconitate/iron regulatory protein 2 Thimo_1469 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Thimo_1469 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Thimo_1469 IPR018136 Aconitase family, 4Fe-4S cluster binding site Thimo_1469 IPR036008 Thimo_1469 Thimo_1470 IPR001463 Sodium:alanine symporter Thimo_1471 IPR002634 BolA protein Thimo_1471 IPR036065 Thimo_1471 Thimo_1472 IPR002110 Ankyrin repeat Thimo_1472 IPR020683 Ankyrin repeat-containing domain Thimo_1472 IPR036770 Thimo_1472 Thimo_1473 IPR014949 Protein of unknown function DUF1820 Thimo_1476 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal Thimo_1477 IPR001478 PDZ domain Thimo_1477 IPR007314 Domain of unknown function DUF399 Thimo_1477 IPR036034 Thimo_1477 Thimo_1478 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site Thimo_1478 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding Thimo_1478 IPR036217 Thimo_1478 Thimo_1478 IPR036388 Thimo_1478 Thimo_1478 IPR036631 Thimo_1478 Thimo_1479 IPR002104 Integrase, catalytic Thimo_1479 IPR004107 Integrase, SAM-like, N-terminal Thimo_1479 IPR010998 Integrase, Lambda-type, N-terminal Thimo_1479 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_1479 IPR011932 Tyrosine recombinase XerD Thimo_1479 IPR013762 Integrase-like, catalytic core Thimo_1479 IPR023009 Tyrosine recombinase XerC/XerD Thimo_1480 IPR007551 Protein of unknown function DUF520 Thimo_1480 IPR035570 Thimo_1480 Thimo_1480 IPR035571 Thimo_1480 Thimo_1480 IPR036183 Thimo_1480 Thimo_1481 IPR009094 Disulphide bond isomerase, DsbC, N-terminal Thimo_1481 IPR012336 Thioredoxin-like fold Thimo_1481 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Thimo_1481 IPR036249 Thimo_1481 Thimo_1482 IPR001932 Protein phosphatase 2C (PP2C)-like domain Thimo_1482 IPR036457 Thimo_1482 Thimo_1484 IPR009057 Homeodomain-like Thimo_1484 IPR012337 Ribonuclease H-like domain Thimo_1484 IPR025959 Winged helix-turn helix domain Thimo_1484 IPR038717 Thimo_1484 Thimo_1485 IPR002699 ATPase, V1 complex, subunit D Thimo_1486 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_1486 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_1486 IPR022879 V-type ATP synthase regulatory subunit B/beta Thimo_1486 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1487 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_1487 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Thimo_1487 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_1487 IPR022878 V-type ATP synthase catalytic alpha chain Thimo_1487 IPR023366 ATP synthase subunit alpha-like domain Thimo_1487 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal Thimo_1487 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1487 IPR031686 Thimo_1487 Thimo_1487 IPR036121 Thimo_1487 Thimo_1488 IPR002842 ATPase, V1/A1 complex, subunit E Thimo_1488 IPR038495 Thimo_1488 Thimo_1489 IPR036906 Thimo_1489 Thimo_1490 IPR000454 ATPase, F0 complex, subunit C Thimo_1490 IPR002379 V-ATPase proteolipid subunit C-like domain Thimo_1490 IPR035921 Thimo_1490 Thimo_1491 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family Thimo_1492 IPR002843 ATPase, V0 complex, c/d subunit Thimo_1492 IPR035067 Thimo_1492 Thimo_1492 IPR036079 Thimo_1492 Thimo_1500 IPR024899 Nitrogen fixation-sustaining protein CowN Thimo_1501 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_1502 IPR002837 Protein of unknown function DUF123 Thimo_1506 IPR001890 RNA-binding, CRM domain Thimo_1506 IPR035920 Thimo_1506 Thimo_1507 IPR016084 Haem oxygenase-like, multi-helical Thimo_1507 IPR024423 Protein of unknown function DUF3050 Thimo_1508 IPR001584 Integrase, catalytic core Thimo_1508 IPR012337 Ribonuclease H-like domain Thimo_1509 IPR000529 Ribosomal protein S6 Thimo_1509 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Thimo_1509 IPR020814 Ribosomal protein S6, plastid/chloroplast Thimo_1509 IPR035980 Thimo_1509 Thimo_1510 IPR001648 Ribosomal protein S18 Thimo_1510 IPR018275 Ribosomal protein S18, conserved site Thimo_1510 IPR036870 Thimo_1510 Thimo_1512 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Thimo_1512 IPR020069 Ribosomal protein L9, C-terminal Thimo_1512 IPR020070 Ribosomal protein L9, N-terminal Thimo_1512 IPR020594 Ribosomal protein L9, bacteria/chloroplast Thimo_1512 IPR036791 Thimo_1512 Thimo_1512 IPR036935 Thimo_1512 Thimo_1513 IPR003593 AAA+ ATPase domain Thimo_1513 IPR007692 DNA helicase, DnaB type Thimo_1513 IPR007693 DNA helicase, DnaB-like, N-terminal Thimo_1513 IPR007694 DNA helicase, DnaB-like, C-terminal Thimo_1513 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Thimo_1513 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1513 IPR036185 Thimo_1513 Thimo_1514 IPR000821 Alanine racemase Thimo_1514 IPR001608 Alanine racemase, N-terminal Thimo_1514 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thimo_1514 IPR011079 Alanine racemase, C-terminal Thimo_1514 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site Thimo_1514 IPR029066 PLP-binding barrel Thimo_1515 IPR003593 AAA+ ATPase domain Thimo_1515 IPR004504 DNA repair protein RadA Thimo_1515 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_1515 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_1515 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1516 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1519 IPR001736 Phospholipase D/Transphosphatidylase Thimo_1519 IPR025202 Phospholipase D-like domain Thimo_1519 IPR032816 Thimo_1519 Thimo_1521 IPR008462 CsbD-like Thimo_1521 IPR026042 Stress response protein YjbJ Thimo_1521 IPR036629 Thimo_1521 Thimo_1522 IPR000612 Proteolipid membrane potential modulator Thimo_1523 IPR002549 Uncharacterised protein family UPF0118 Thimo_1524 IPR019831 Manganese/iron superoxide dismutase, N-terminal Thimo_1524 IPR019832 Manganese/iron superoxide dismutase, C-terminal Thimo_1524 IPR036314 Thimo_1524 Thimo_1524 IPR036324 Thimo_1524 Thimo_1525 IPR001424 Superoxide dismutase, copper/zinc binding domain Thimo_1525 IPR036423 Thimo_1525 Thimo_1526 IPR021446 Thermoproteus tenax spherical virus 1, Orf18 Thimo_1527 IPR012556 Entericidin EcnAB Thimo_1528 IPR002931 Transglutaminase-like Thimo_1528 IPR013589 Bacterial transglutaminase-like, N-terminal Thimo_1528 IPR038765 Thimo_1528 Thimo_1530 IPR000504 RNA recognition motif domain Thimo_1530 IPR012677 Nucleotide-binding, alpha-beta plait Thimo_1530 IPR035979 Thimo_1530 Thimo_1531 IPR035173 Thimo_1531 Thimo_1532 IPR019410 Nicotinamide N-methyltransferase-like Thimo_1532 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1533 IPR000504 RNA recognition motif domain Thimo_1533 IPR012677 Nucleotide-binding, alpha-beta plait Thimo_1533 IPR035979 Thimo_1533 Thimo_1536 IPR003439 ABC transporter-like Thimo_1536 IPR003593 AAA+ ATPase domain Thimo_1536 IPR017871 ABC transporter, conserved site Thimo_1536 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1536 IPR030679 Thimo_1536 Thimo_1537 IPR000253 Forkhead-associated (FHA) domain Thimo_1537 IPR003439 ABC transporter-like Thimo_1537 IPR003593 AAA+ ATPase domain Thimo_1537 IPR008984 SMAD/FHA domain Thimo_1537 IPR013525 ABC-2 type transporter Thimo_1537 IPR017871 ABC transporter, conserved site Thimo_1537 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1538 IPR000719 Protein kinase domain Thimo_1538 IPR008271 Serine/threonine-protein kinase, active site Thimo_1538 IPR011009 Protein kinase-like domain Thimo_1538 IPR017441 Protein kinase, ATP binding site Thimo_1539 IPR002035 von Willebrand factor, type A Thimo_1539 IPR036465 Thimo_1539 Thimo_1542 IPR000515 MetI-like domain Thimo_1542 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Thimo_1542 IPR035906 Thimo_1542 Thimo_1543 IPR000515 MetI-like domain Thimo_1543 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family Thimo_1543 IPR035906 Thimo_1543 Thimo_1544 IPR001638 Extracellular solute-binding protein, family 3 Thimo_1544 IPR018313 Extracellular solute-binding protein, family 3, conserved site Thimo_1546 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Thimo_1546 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_1546 IPR027372 Phytase-like domain Thimo_1547 IPR001585 Transaldolase Thimo_1547 IPR004732 Transaldolase type 2 Thimo_1547 IPR005474 Transketolase, N-terminal Thimo_1547 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_1547 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_1547 IPR013785 Aldolase-type TIM barrel Thimo_1547 IPR018225 Transaldolase, active site Thimo_1547 IPR020826 Transketolase binding site Thimo_1547 IPR029061 Thiamin diphosphate-binding fold Thimo_1547 IPR033248 Thimo_1547 Thimo_1549 IPR006153 Cation/H+ exchanger Thimo_1549 IPR038770 Thimo_1549 Thimo_1550 IPR003445 Cation transporter Thimo_1551 IPR003148 Regulator of K+ conductance, N-terminal Thimo_1551 IPR006037 Regulator of K+ conductance, C-terminal Thimo_1551 IPR036291 Thimo_1551 Thimo_1551 IPR036721 Thimo_1551 Thimo_1552 IPR009760 Protein of unknown function DUF1328 Thimo_1555 IPR005135 Endonuclease/exonuclease/phosphatase Thimo_1555 IPR036691 Thimo_1555 Thimo_1556 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_1556 IPR025526 DsrC-like domain Thimo_1559 IPR017039 Virulence factor BrkB Thimo_1560 IPR010305 Protein of unknown function DUF903 Thimo_1560 IPR010920 Like-Sm (LSM) domain Thimo_1561 IPR002912 ACT domain Thimo_1561 IPR003607 HD/PDEase domain Thimo_1561 IPR004095 TGS Thimo_1561 IPR004811 RelA/SpoT family Thimo_1561 IPR007685 RelA/SpoT Thimo_1561 IPR012675 Beta-grasp domain Thimo_1561 IPR012676 TGS-like Thimo_1562 IPR008323 Uncharacterised conserved protein UCP033563 Thimo_1563 IPR001584 Integrase, catalytic core Thimo_1563 IPR012337 Ribonuclease H-like domain Thimo_1565 IPR003439 ABC transporter-like Thimo_1565 IPR003593 AAA+ ATPase domain Thimo_1565 IPR017871 ABC transporter, conserved site Thimo_1565 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1566 IPR008265 Lipase, GDSL, active site Thimo_1566 IPR013830 Thimo_1566 Thimo_1566 IPR036514 Thimo_1566 Thimo_1567 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1567 IPR036188 Thimo_1567 Thimo_1568 IPR003399 Mammalian cell entry-related Thimo_1569 IPR020358 Uncharacterised protein family Y4oB Thimo_1569 IPR024467 Domain of unknown function DUF2384 Thimo_1570 IPR000014 PAS domain Thimo_1570 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thimo_1570 IPR000780 MCP methyltransferase, CheR-type Thimo_1570 IPR001610 PAC motif Thimo_1570 IPR001789 Signal transduction response regulator, receiver domain Thimo_1570 IPR003018 GAF domain Thimo_1570 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1570 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_1570 IPR011006 CheY-like superfamily Thimo_1570 IPR013655 PAS fold-3 Thimo_1570 IPR013656 PAS fold-4 Thimo_1570 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Thimo_1570 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thimo_1570 IPR029016 GAF domain-like Thimo_1570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1570 IPR035909 Thimo_1570 Thimo_1570 IPR035965 Thimo_1570 Thimo_1570 IPR036097 Thimo_1570 Thimo_1570 IPR036890 Thimo_1570 Thimo_1571 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thimo_1571 IPR011247 Chemotaxis protein-glutamate methylesterase Thimo_1571 IPR035909 Thimo_1571 Thimo_1572 IPR021767 Protein of unknown function DUF3330 Thimo_1573 IPR005372 Uncharacterised protein family UPF0182 Thimo_1574 IPR003779 Carboxymuconolactone decarboxylase-like Thimo_1574 IPR004675 Alkylhydroperoxidase AhpD core Thimo_1574 IPR029032 AhpD-like Thimo_1576 IPR002514 Transposase IS3/IS911family Thimo_1576 IPR009057 Homeodomain-like Thimo_1576 IPR036388 Thimo_1576 Thimo_1577 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1578 IPR029062 Class I glutamine amidotransferase-like Thimo_1578 IPR033752 Thimo_1578 Thimo_1580 IPR006656 Molybdopterin oxidoreductase Thimo_1580 IPR006657 Molydopterin dinucleotide-binding domain Thimo_1580 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thimo_1580 IPR009010 Aspartate decarboxylase-like domain Thimo_1581 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1581 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1582 IPR007059 DMSO reductase anchor subunit (DmsC) Thimo_1583 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thimo_1583 IPR036761 Thimo_1583 Thimo_1584 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_1584 IPR016174 Di-haem cytochrome, transmembrane Thimo_1585 IPR011758 Alpha-L-glutamate ligase-related protein Thimo_1585 IPR039523 Thimo_1585 Thimo_1586 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices Thimo_1586 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase Thimo_1587 IPR021109 Aspartic peptidase domain Thimo_1588 IPR001763 Rhodanese-like domain Thimo_1588 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thimo_1588 IPR016156 FAD/NAD-linked reductase, dimerisation domain Thimo_1588 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1588 IPR036188 Thimo_1588 Thimo_1588 IPR036873 Thimo_1588 Thimo_1589 IPR006004 Glutamate synthase (NADPH), homotetrameric Thimo_1589 IPR009051 Alpha-helical ferredoxin Thimo_1589 IPR009078 Ferritin-like superfamily Thimo_1589 IPR012347 Ferritin-related Thimo_1589 IPR017938 Riboflavin synthase-like beta-barrel Thimo_1589 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Thimo_1589 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_1589 IPR028261 Dihydroprymidine dehydrogenase domain II Thimo_1589 IPR036188 Thimo_1589 Thimo_1589 IPR039261 Thimo_1589 Thimo_1590 IPR005134 Uncharacterised protein family UPF0114 Thimo_1590 IPR020761 Uncharacterised protein family UPF0114, bacteria Thimo_1591 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase Thimo_1591 IPR010979 Ribosomal protein S13-like, H2TH Thimo_1591 IPR012319 DNA glycosylase/AP lyase, catalytic domain Thimo_1591 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding Thimo_1591 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site Thimo_1591 IPR035937 Thimo_1591 Thimo_1592 IPR001650 Helicase, C-terminal Thimo_1592 IPR003593 AAA+ ATPase domain Thimo_1592 IPR011545 DEAD/DEAH box helicase domain Thimo_1592 IPR013701 DEAD/H associated Thimo_1592 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1592 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1594 IPR007111 NACHT nucleoside triphosphatase Thimo_1594 IPR011989 Armadillo-like helical Thimo_1594 IPR016024 Armadillo-type fold Thimo_1594 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1597 IPR022488 Polyphosphate kinase-2-related Thimo_1597 IPR022489 Polyphosphate:AMP phosphotransferase Thimo_1597 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1598 IPR006683 Thioesterase superfamily Thimo_1598 IPR029069 HotDog domain Thimo_1601 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_1602 IPR001036 Acriflavin resistance protein Thimo_1602 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_1603 IPR006143 RND efflux pump, membrane fusion protein Thimo_1604 IPR001264 Glycosyl transferase, family 51 Thimo_1604 IPR001460 Penicillin-binding protein, transpeptidase Thimo_1604 IPR012338 Beta-lactamase/transpeptidase-like Thimo_1604 IPR023346 Lysozyme-like domain Thimo_1604 IPR031376 Thimo_1604 Thimo_1604 IPR036950 Thimo_1604 Thimo_1605 IPR001650 Helicase, C-terminal Thimo_1605 IPR007502 Helicase-associated domain Thimo_1605 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type Thimo_1605 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal Thimo_1605 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1605 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1607 IPR000160 GGDEF domain Thimo_1607 IPR001789 Signal transduction response regulator, receiver domain Thimo_1607 IPR011006 CheY-like superfamily Thimo_1607 IPR029787 Nucleotide cyclase Thimo_1608 IPR024755 Molybdenum cofactor carrier, putative Thimo_1609 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 Thimo_1609 IPR006073 GTP binding domain Thimo_1609 IPR012675 Beta-grasp domain Thimo_1609 IPR012676 TGS-like Thimo_1609 IPR013029 Domain of unknown function DUF933 Thimo_1609 IPR023192 TGS-like domain Thimo_1609 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1610 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein Thimo_1610 IPR036567 Thimo_1610 Thimo_1613 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase Thimo_1613 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Thimo_1615 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Thimo_1615 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_1615 IPR005856 Cysteine synthase K/M Thimo_1615 IPR005858 Cysteine synthase B Thimo_1615 IPR036052 Thimo_1615 Thimo_1616 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Thimo_1616 IPR010280 (Uracil-5)-methyltransferase family Thimo_1616 IPR012340 Nucleic acid-binding, OB-fold Thimo_1616 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1616 IPR030390 Thimo_1616 Thimo_1616 IPR030391 Thimo_1616 Thimo_1617 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain Thimo_1617 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1619 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thimo_1619 IPR004013 PHP, C-terminal Thimo_1619 IPR004805 DNA polymerase III, alpha subunit Thimo_1619 IPR011708 Bacterial DNA polymerase III, alpha subunit Thimo_1619 IPR016195 Polymerase/histidinol phosphatase-like Thimo_1619 IPR023073 DNA polymerase, error-prone Thimo_1619 IPR029460 DNA polymerase, helix-hairpin-helix motif Thimo_1620 IPR001126 DNA-repair protein, UmuC-like Thimo_1621 IPR013765 DNA recombination and repair protein RecA Thimo_1621 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1622 IPR006197 Peptidase S24, LexA-like Thimo_1622 IPR006199 LexA repressor, DNA-binding domain Thimo_1622 IPR006200 LexA repressor Thimo_1622 IPR015927 Peptidase S24/S26A/S26B/S26C Thimo_1622 IPR036286 Thimo_1622 Thimo_1622 IPR036388 Thimo_1622 Thimo_1622 IPR036390 Thimo_1622 Thimo_1623 IPR001920 Asp/Glu racemase Thimo_1623 IPR004391 Glutamate racemase Thimo_1623 IPR015942 Asp/Glu/hydantoin racemase Thimo_1623 IPR033134 Thimo_1623 Thimo_1624 IPR002686 Transposase IS200-like Thimo_1624 IPR036515 Thimo_1624 Thimo_1625 IPR011051 RmlC-like cupin domain Thimo_1625 IPR013096 Cupin 2, conserved barrel Thimo_1625 IPR014710 RmlC-like jelly roll fold Thimo_1626 IPR013433 Putative polyhydroxyalkanoic acid system protein Thimo_1627 IPR007899 CHAD Thimo_1627 IPR038186 Thimo_1627 Thimo_1628 IPR001585 Transaldolase Thimo_1628 IPR004730 Transaldolase type 1 Thimo_1628 IPR013785 Aldolase-type TIM barrel Thimo_1628 IPR018225 Transaldolase, active site Thimo_1629 IPR016040 NAD(P)-binding domain Thimo_1629 IPR036291 Thimo_1629 Thimo_1630 IPR012312 Haemerythrin/HHE cation-binding motif Thimo_1630 IPR012827 Haemerythrin-like, metal-binding domain Thimo_1630 IPR016131 Haemerythrin, iron-binding site Thimo_1630 IPR035938 Thimo_1630 Thimo_1631 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1631 IPR029058 Alpha/Beta hydrolase fold Thimo_1632 IPR001555 Phosphoribosylglycinamide formyltransferase, active site Thimo_1632 IPR002376 Formyl transferase, N-terminal Thimo_1632 IPR004607 Phosphoribosylglycinamide formyltransferase Thimo_1632 IPR036477 Thimo_1632 Thimo_1633 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase Thimo_1633 IPR010918 AIR synthase-related protein, C-terminal domain Thimo_1633 IPR016188 PurM, N-terminal-like Thimo_1633 IPR036676 Thimo_1633 Thimo_1633 IPR036921 Thimo_1633 Thimo_1634 IPR000462 CDP-alcohol phosphatidyltransferase Thimo_1634 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Thimo_1635 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) Thimo_1635 IPR017788 DnaA regulatory inactivator Hda Thimo_1635 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1636 IPR001226 Flavodoxin, conserved site Thimo_1636 IPR005025 NADPH-dependent FMN reductase-like Thimo_1636 IPR010089 Flavoprotein WrbA Thimo_1636 IPR029039 Flavoprotein-like Thimo_1637 IPR001792 Acylphosphatase-like domain Thimo_1637 IPR017968 Acylphosphatase, conserved site Thimo_1637 IPR036046 Thimo_1637 Thimo_1638 IPR024671 Autophagy-related protein 22-like Thimo_1638 IPR036259 Thimo_1638 Thimo_1639 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1640 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1640 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit Thimo_1640 IPR029058 Alpha/Beta hydrolase fold Thimo_1641 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit Thimo_1642 IPR002155 Thiolase Thimo_1642 IPR016039 Thiolase-like Thimo_1642 IPR020610 Thiolase, active site Thimo_1642 IPR020613 Thiolase, conserved site Thimo_1642 IPR020615 Thiolase, acyl-enzyme intermediate active site Thimo_1642 IPR020616 Thiolase, N-terminal Thimo_1642 IPR020617 Thiolase, C-terminal Thimo_1643 IPR007897 PHB accumulation regulatory Thimo_1643 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR Thimo_1643 IPR012909 PHA accumulation regulator DNA-binding, N-terminal Thimo_1645 IPR018968 Phasin Thimo_1646 IPR002347 Glucose/ribitol dehydrogenase Thimo_1646 IPR011283 Acetoacetyl-CoA reductase Thimo_1646 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_1646 IPR036291 Thimo_1646 Thimo_1647 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Thimo_1647 IPR036069 Thimo_1647 Thimo_1648 IPR005805 Rieske iron-sulphur protein, C-terminal Thimo_1648 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Thimo_1648 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thimo_1648 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Thimo_1648 IPR036922 Thimo_1648 Thimo_1649 IPR005797 Cytochrome b/b6, N-terminal Thimo_1649 IPR005798 Cytochrome b/b6, C-terminal Thimo_1649 IPR016174 Di-haem cytochrome, transmembrane Thimo_1649 IPR027387 Cytochrome b/b6-like domain Thimo_1649 IPR030689 Thimo_1649 Thimo_1649 IPR036150 Thimo_1649 Thimo_1650 IPR002326 Cytochrome c1 Thimo_1650 IPR036909 Thimo_1650 Thimo_1651 IPR004045 Glutathione S-transferase, N-terminal Thimo_1651 IPR004046 Glutathione S-transferase, C-terminal Thimo_1651 IPR011767 Glutaredoxin active site Thimo_1651 IPR036249 Thimo_1651 Thimo_1651 IPR036282 Thimo_1651 Thimo_1652 IPR007481 Stringent starvation protein B Thimo_1652 IPR036760 Thimo_1652 Thimo_1653 IPR021732 Protein of unknown function DUF3301 Thimo_1654 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_1654 IPR016174 Di-haem cytochrome, transmembrane Thimo_1655 IPR022985 CysZ, gammaproteobacteria Thimo_1656 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Thimo_1656 IPR029052 Metallo-dependent phosphatase-like Thimo_1658 IPR002942 RNA-binding S4 domain Thimo_1658 IPR025708 Heat shock protein 15 Thimo_1658 IPR036986 Thimo_1658 Thimo_1659 IPR002109 Glutaredoxin Thimo_1659 IPR011767 Glutaredoxin active site Thimo_1659 IPR011900 Glutaredoxin, GrxC Thimo_1659 IPR014025 Glutaredoxin subgroup Thimo_1659 IPR036249 Thimo_1659 Thimo_1660 IPR012779 Peptidase M1, alanyl aminopeptidase Thimo_1660 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal Thimo_1660 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Thimo_1660 IPR027268 Thimo_1660 Thimo_1660 IPR035414 Thimo_1660 Thimo_1660 IPR037144 Thimo_1660 Thimo_1660 IPR038438 Thimo_1660 Thimo_1665 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal Thimo_1665 IPR003346 Transposase, IS116/IS110/IS902 Thimo_1670 IPR002514 Transposase IS3/IS911family Thimo_1670 IPR009057 Homeodomain-like Thimo_1672 IPR032317 Thimo_1672 Thimo_1673 IPR003439 ABC transporter-like Thimo_1673 IPR003593 AAA+ ATPase domain Thimo_1673 IPR017871 ABC transporter, conserved site Thimo_1673 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1676 IPR009912 Protein of unknown function DUF1451 Thimo_1677 IPR006222 Glycine cleavage T-protein, N-terminal Thimo_1677 IPR006223 Glycine cleavage system T protein Thimo_1677 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain Thimo_1677 IPR022903 Glycine cleavage system T protein, bacteria Thimo_1677 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Thimo_1677 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA Thimo_1677 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Thimo_1678 IPR002930 Glycine cleavage system H-protein Thimo_1678 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Thimo_1678 IPR011053 Single hybrid motif Thimo_1678 IPR017453 Glycine cleavage system H-protein, subgroup Thimo_1678 IPR033753 Thimo_1678 Thimo_1679 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1679 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1679 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1679 IPR020581 Glycine cleavage system P protein Thimo_1679 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 Thimo_1680 IPR002065 Putative thiol peroxidase Tpx Thimo_1680 IPR013740 Redoxin Thimo_1680 IPR018219 Thiol peroxidase conserved site Thimo_1680 IPR036249 Thimo_1680 Thimo_1681 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1681 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1681 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1681 IPR020581 Glycine cleavage system P protein Thimo_1681 IPR023012 Glycine cleavage system P protein, subunit 2, putative Thimo_1682 IPR000829 Diacylglycerol kinase, prokaryotic Thimo_1682 IPR036945 Thimo_1682 Thimo_1683 IPR001453 Molybdopterin binding domain Thimo_1683 IPR012245 Molybdenum cofactor biosynthesis protein MoaB Thimo_1683 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria Thimo_1683 IPR036425 Thimo_1683 Thimo_1684 IPR001453 Molybdopterin binding domain Thimo_1684 IPR005110 MoeA, N-terminal and linker domain Thimo_1684 IPR005111 MoeA, C-terminal, domain IV Thimo_1684 IPR008284 Molybdenum cofactor biosynthesis, conserved site Thimo_1684 IPR036135 Thimo_1684 Thimo_1684 IPR036425 Thimo_1684 Thimo_1684 IPR036688 Thimo_1684 Thimo_1685 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Thimo_1685 IPR012675 Beta-grasp domain Thimo_1685 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thimo_1686 IPR000640 Translation elongation factor EFG, V domain Thimo_1686 IPR000795 Elongation factor, GTP-binding domain Thimo_1686 IPR005225 Small GTP-binding protein domain Thimo_1686 IPR005517 Translation elongation factor EFG/EF2, domain IV Thimo_1686 IPR009000 Translation protein, beta-barrel domain Thimo_1686 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_1686 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_1686 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1686 IPR035647 Thimo_1686 Thimo_1687 IPR005490 L,D-transpeptidase catalytic domain Thimo_1687 IPR038063 Thimo_1687 Thimo_1688 IPR021793 Protein of unknown function DUF3359 Thimo_1689 IPR002800 Protein of unknown function DUF98 Thimo_1689 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain Thimo_1690 IPR001789 Signal transduction response regulator, receiver domain Thimo_1690 IPR003607 HD/PDEase domain Thimo_1690 IPR006674 HD domain Thimo_1690 IPR011006 CheY-like superfamily Thimo_1691 IPR001789 Signal transduction response regulator, receiver domain Thimo_1691 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1691 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_1691 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_1691 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thimo_1691 IPR011006 CheY-like superfamily Thimo_1691 IPR036097 Thimo_1691 Thimo_1691 IPR036641 Thimo_1691 Thimo_1691 IPR036890 Thimo_1691 Thimo_1692 IPR002508 Cell wall hydrolase/autolysin, catalytic Thimo_1692 IPR018392 LysM domain Thimo_1692 IPR021731 AMIN domain Thimo_1692 IPR036779 Thimo_1692 Thimo_1693 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE Thimo_1693 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1694 IPR000631 YjeF C-terminal domain Thimo_1694 IPR004443 YjeF N-terminal domain Thimo_1694 IPR017953 Carbohydrate kinase, predicted, conserved site Thimo_1694 IPR029056 Ribokinase-like Thimo_1694 IPR030677 Thimo_1694 Thimo_1694 IPR036652 Thimo_1694 Thimo_1695 IPR001518 Argininosuccinate synthase Thimo_1695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1695 IPR018223 Argininosuccinate synthase, conserved site Thimo_1695 IPR023434 Argininosuccinate synthase, type 1 subfamily Thimo_1695 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body Thimo_1696 IPR012042 Uncharacterised conserved protein UCP016487, CYTH-type Thimo_1696 IPR023577 CYTH-like domain Thimo_1696 IPR033469 Thimo_1696 Thimo_1697 IPR000914 Bacterial extracellular solute-binding protein, family 5 Thimo_1697 IPR030678 Thimo_1697 Thimo_1698 IPR000358 Ribonucleotide reductase small subunit Thimo_1698 IPR009078 Ferritin-like superfamily Thimo_1698 IPR012348 Ribonucleotide reductase-related Thimo_1699 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_1699 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_1699 IPR029061 Thiamin diphosphate-binding fold Thimo_1699 IPR033248 Thimo_1699 Thimo_1700 IPR001017 Dehydrogenase, E1 component Thimo_1700 IPR029061 Thiamin diphosphate-binding fold Thimo_1701 IPR000847 Transcription regulator HTH, LysR Thimo_1701 IPR005119 LysR, substrate-binding Thimo_1701 IPR036388 Thimo_1701 Thimo_1701 IPR036390 Thimo_1701 Thimo_1702 IPR019401 Zinc finger, CHCC-type Thimo_1703 IPR001544 Aminotransferase, class IV Thimo_1703 IPR005785 Branched-chain amino acid aminotransferase I Thimo_1703 IPR018300 Aminotransferase, class IV, conserved site Thimo_1703 IPR036038 Thimo_1703 Thimo_1704 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain Thimo_1704 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase Thimo_1704 IPR023057 Glutamate-ammonia-ligase adenylyltransferase Thimo_1705 IPR037291 Thimo_1705 Thimo_1706 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thimo_1706 IPR019812 Hydrogenase assembly chaperone, conserved site Thimo_1706 IPR037254 Thimo_1706 Thimo_1708 IPR005177 Bifunctional kinase-pyrophosphorylase Thimo_1708 IPR026530 Phosphoenolpyruvate synthase regulatory protein Thimo_1711 IPR011990 Tetratricopeptide-like helical domain Thimo_1711 IPR019734 Tetratricopeptide repeat Thimo_1711 IPR030865 Thimo_1711 Thimo_1712 IPR001754 Orotidine 5'-phosphate decarboxylase domain Thimo_1712 IPR011060 Ribulose-phosphate binding barrel Thimo_1712 IPR013785 Aldolase-type TIM barrel Thimo_1712 IPR014732 Orotidine 5'-phosphate decarboxylase Thimo_1712 IPR018089 Orotidine 5'-phosphate decarboxylase, active site Thimo_1713 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type Thimo_1713 IPR005835 Nucleotidyl transferase Thimo_1713 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_1714 IPR026022 PhoU domain Thimo_1714 IPR028366 Phosphate transport system protein PhoU Thimo_1714 IPR038078 Thimo_1714 Thimo_1716 IPR002636 Ralstonia phage RSS1, Orf11 Thimo_1718 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_1718 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_1718 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thimo_1719 IPR007711 Plasmid maintenance system killer Thimo_1719 IPR035093 Thimo_1719 Thimo_1721 IPR004017 Cysteine-rich domain Thimo_1721 IPR004113 FAD-linked oxidase, C-terminal Thimo_1721 IPR006094 FAD linked oxidase, N-terminal Thimo_1721 IPR009051 Alpha-helical ferredoxin Thimo_1721 IPR016164 FAD-linked oxidase-like, C-terminal Thimo_1721 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1721 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1721 IPR021817 Protein of unknown function DUF3400 Thimo_1721 IPR022153 Protein of unknown function DUF3683 Thimo_1721 IPR036318 Thimo_1721 Thimo_1722 IPR004193 Glycoside hydrolase, family 13, N-terminal Thimo_1722 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_1722 IPR011837 Glycogen debranching enzyme, GlgX type Thimo_1722 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_1722 IPR013783 Immunoglobulin-like fold Thimo_1722 IPR014756 Immunoglobulin E-set Thimo_1722 IPR017853 Glycoside hydrolase, superfamily Thimo_1723 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1723 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_1723 IPR036097 Thimo_1723 Thimo_1723 IPR036890 Thimo_1723 Thimo_1724 IPR001789 Signal transduction response regulator, receiver domain Thimo_1724 IPR001867 Signal transduction response regulator, C-terminal Thimo_1724 IPR011006 CheY-like superfamily Thimo_1724 IPR036388 Thimo_1724 Thimo_1725 IPR025711 PepSY domain Thimo_1726 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_1726 IPR016174 Di-haem cytochrome, transmembrane Thimo_1727 IPR015170 Protein of unknown function DUF1924 Thimo_1727 IPR036909 Thimo_1727 Thimo_1728 IPR018588 Dihaem cytochrome c Thimo_1729 IPR002048 EF-hand domain Thimo_1729 IPR011992 EF-hand domain pair Thimo_1729 IPR018247 EF-Hand 1, calcium-binding site Thimo_1730 IPR002151 Kinesin light chain Thimo_1730 IPR011990 Tetratricopeptide-like helical domain Thimo_1730 IPR019734 Tetratricopeptide repeat Thimo_1731 IPR000595 Cyclic nucleotide-binding domain Thimo_1731 IPR012318 Helix-turn-helix motif, Crp-type Thimo_1731 IPR014710 RmlC-like jelly roll fold Thimo_1731 IPR018490 Cyclic nucleotide-binding-like Thimo_1731 IPR036388 Thimo_1731 Thimo_1731 IPR036390 Thimo_1731 Thimo_1733 IPR003848 Domain of unknown function DUF218 Thimo_1733 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1734 IPR002817 Thiamine biosynthesis protein ThiC Thimo_1734 IPR025747 ThiC-associated domain Thimo_1734 IPR037509 Thimo_1734 Thimo_1734 IPR038521 Thimo_1734 Thimo_1735 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal Thimo_1735 IPR004393 Nicotinate-nucleotide pyrophosphorylase Thimo_1735 IPR013785 Aldolase-type TIM barrel Thimo_1735 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal Thimo_1735 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Thimo_1735 IPR036068 Thimo_1735 Thimo_1735 IPR037128 Thimo_1735 Thimo_1736 IPR012434 Protein of unknown function DUF1631 Thimo_1737 IPR002502 N-acetylmuramoyl-L-alanine amidase domain Thimo_1737 IPR036505 Thimo_1737 Thimo_1738 IPR011088 Bacteriophage phiNM3, A0EWY4 Thimo_1739 IPR007730 Sporulation-related domain Thimo_1739 IPR036680 Thimo_1739 Thimo_1740 IPR001278 Arginine-tRNA ligase Thimo_1740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_1740 IPR005148 Arginyl tRNA synthetase N-terminal domain Thimo_1740 IPR008909 DALR anticodon binding Thimo_1740 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_1740 IPR035684 Thimo_1740 Thimo_1740 IPR036695 Thimo_1740 Thimo_1741 IPR000182 GNAT domain Thimo_1741 IPR003010 Carbon-nitrogen hydrolase Thimo_1741 IPR016181 Acyl-CoA N-acyltransferase Thimo_1741 IPR036526 Thimo_1741 Thimo_1742 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site Thimo_1742 IPR011032 GroES (chaperonin 10)-like Thimo_1742 IPR013154 Alcohol dehydrogenase GroES-like Thimo_1742 IPR020843 Polyketide synthase, enoylreductase Thimo_1742 IPR036291 Thimo_1742 Thimo_1743 IPR000979 Phosphodiesterase MJ0936/Vps29 Thimo_1743 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Thimo_1743 IPR029052 Metallo-dependent phosphatase-like Thimo_1744 IPR002068 Alpha crystallin/Hsp20 domain Thimo_1744 IPR008978 HSP20-like chaperone Thimo_1745 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase Thimo_1745 IPR011042 Six-bladed beta-propeller, TolB-like Thimo_1745 IPR012938 Glucose/Sorbosone dehydrogenase Thimo_1747 IPR003593 AAA+ ATPase domain Thimo_1747 IPR011704 ATPase, dynein-related, AAA domain Thimo_1747 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1748 IPR018698 VWA-like domain Thimo_1748 IPR025154 Putative metallopeptidase domain Thimo_1748 IPR036465 Thimo_1748 Thimo_1752 IPR000421 Coagulation factor 5/8 C-terminal type domain Thimo_1752 IPR000601 PKD domain Thimo_1752 IPR008979 Galactose-binding domain-like Thimo_1752 IPR013783 Immunoglobulin-like fold Thimo_1752 IPR022409 PKD/Chitinase domain Thimo_1752 IPR025965 FlgD Ig-like domain Thimo_1752 IPR035986 Thimo_1752 Thimo_1753 IPR001826 RHS protein Thimo_1753 IPR006530 YD repeat Thimo_1753 IPR022385 Rhs repeat-associated core Thimo_1753 IPR031325 Thimo_1753 Thimo_1756 IPR011467 Protein of unknown function DUF1573 Thimo_1756 IPR013783 Immunoglobulin-like fold Thimo_1757 IPR011042 Six-bladed beta-propeller, TolB-like Thimo_1757 IPR011659 WD40-like Beta Propeller Thimo_1758 IPR025965 FlgD Ig-like domain Thimo_1760 IPR006061 Bacterial extracellular solute-binding family 1, conserved site Thimo_1760 IPR026045 Ferric binding protein Thimo_1761 IPR000515 MetI-like domain Thimo_1761 IPR035906 Thimo_1761 Thimo_1762 IPR003439 ABC transporter-like Thimo_1762 IPR003593 AAA+ ATPase domain Thimo_1762 IPR017871 ABC transporter, conserved site Thimo_1762 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1763 IPR018634 Chromate resistance exported protein Thimo_1767 IPR002104 Integrase, catalytic Thimo_1767 IPR010998 Integrase, Lambda-type, N-terminal Thimo_1767 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_1767 IPR025166 Domain of unknown function DUF4102 Thimo_1767 IPR038488 Thimo_1767 Thimo_1769 IPR009061 DNA binding domain, putative Thimo_1770 IPR014819 Primase, C-terminal 2 Thimo_1770 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1777 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_1777 IPR036737 Thimo_1777 Thimo_1778 IPR028943 EH signature domain Thimo_1779 IPR000330 SNF2-related Thimo_1779 IPR001650 Helicase, C-terminal Thimo_1779 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1779 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1779 IPR038718 Thimo_1779 Thimo_1783 IPR003801 GTP cyclohydrolase FolE2/MptA Thimo_1783 IPR022838 GTP cyclohydrolase FolE2 Thimo_1784 IPR000092 Polyprenyl synthetase Thimo_1784 IPR008949 Terpenoid synthase Thimo_1784 IPR033749 Thimo_1784 Thimo_1785 IPR003761 Exonuclease VII, small subunit Thimo_1785 IPR037004 Thimo_1785 Thimo_1786 IPR001241 DNA topoisomerase, type IIA Thimo_1786 IPR002288 DNA gyrase B subunit, C-terminal Thimo_1786 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_1786 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative Thimo_1786 IPR006171 Toprim domain Thimo_1786 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 Thimo_1786 IPR013759 DNA topoisomerase, type IIA, central domain Thimo_1786 IPR013760 DNA topoisomerase, type IIA-like domain Thimo_1786 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_1786 IPR018522 DNA topoisomerase, type IIA, conserved site Thimo_1786 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_1786 IPR036890 Thimo_1786 Thimo_1787 IPR005133 Na+/H+ antiporter subunit G Thimo_1788 IPR007208 Na(+)/H(+) antiporter subunit F-like Thimo_1789 IPR002758 Na+/H+ antiporter subunit E Thimo_1790 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_1790 IPR003918 NADH:ubiquinone oxidoreductase Thimo_1791 IPR039428 Thimo_1791 Thimo_1792 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Thimo_1792 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_1792 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thimo_1792 IPR025383 Domain of unknown function DUF4040 Thimo_1793 IPR002524 Cation efflux protein Thimo_1793 IPR027469 Cation efflux protein transmembrane domain Thimo_1794 IPR015102 Transcriptional regulator HTH-type, FeoC Thimo_1794 IPR036390 Thimo_1794 Thimo_1795 IPR003373 Ferrous iron transport protein B Thimo_1795 IPR005225 Small GTP-binding protein domain Thimo_1795 IPR006073 GTP binding domain Thimo_1795 IPR011640 Ferrous iron transport protein B, C-terminal Thimo_1795 IPR011642 Nucleoside recognition Gate Thimo_1795 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1795 IPR030389 Thimo_1795 Thimo_1796 IPR007167 Ferrous iron transporter FeoA domain Thimo_1796 IPR008988 Transcriptional repressor, C-terminal Thimo_1796 IPR038157 Thimo_1796 Thimo_1797 IPR007167 Ferrous iron transporter FeoA domain Thimo_1797 IPR008988 Transcriptional repressor, C-terminal Thimo_1797 IPR038157 Thimo_1797 Thimo_1798 IPR014369 Glycine/Sarcosine N-methyltransferase Thimo_1798 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1799 IPR013216 Methyltransferase type 11 Thimo_1799 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1800 IPR001474 GTP cyclohydrolase I Thimo_1800 IPR018234 GTP cyclohydrolase I, conserved site Thimo_1800 IPR020602 GTP cyclohydrolase I domain Thimo_1801 IPR001962 Asparagine synthase Thimo_1801 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thimo_1801 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1801 IPR017535 Asparagine synthase family amidotransferase Thimo_1801 IPR017932 Glutamine amidotransferase type 2 domain Thimo_1801 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_1802 IPR000182 GNAT domain Thimo_1802 IPR013651 ATP-grasp fold, RimK-type Thimo_1802 IPR013815 ATP-grasp fold, subdomain 1 Thimo_1802 IPR016181 Acyl-CoA N-acyltransferase Thimo_1802 IPR017534 GNAT-acetyltransferase Thimo_1803 IPR008007 Peptidase M42 Thimo_1803 IPR017537 Peptidase M42, hydrolase Thimo_1803 IPR023367 Peptidase M42, domain 2 Thimo_1804 IPR004881 Ribosome biogenesis GTPase RsgA, putative Thimo_1804 IPR010914 EngC GTPase Thimo_1804 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1805 IPR012337 Ribonuclease H-like domain Thimo_1805 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_1805 IPR022894 Oligoribonuclease Thimo_1805 IPR036397 Thimo_1805 Thimo_1806 IPR004453 Epoxyqueuosine reductase QueG Thimo_1806 IPR009051 Alpha-helical ferredoxin Thimo_1806 IPR013542 Domain of unknown function DUF1730 Thimo_1806 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1807 IPR019291 Host attachment protein Thimo_1808 IPR000445 Helix-hairpin-helix motif Thimo_1808 IPR003265 HhH-GPD domain Thimo_1808 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif Thimo_1808 IPR004035 Endonuclease III, iron-sulphur binding site Thimo_1808 IPR004036 Endonuclease III-like, conserved site-2 Thimo_1808 IPR005759 Endonuclease III Thimo_1808 IPR011257 DNA glycosylase Thimo_1808 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Thimo_1809 IPR000286 Histone deacetylase superfamily Thimo_1809 IPR023696 Ureohydrolase domain Thimo_1809 IPR023801 Histone deacetylase domain Thimo_1809 IPR037138 Thimo_1809 Thimo_1810 IPR000182 GNAT domain Thimo_1810 IPR003781 CoA-binding Thimo_1810 IPR013815 ATP-grasp fold, subdomain 1 Thimo_1810 IPR016102 Succinyl-CoA synthetase-like Thimo_1810 IPR016181 Acyl-CoA N-acyltransferase Thimo_1810 IPR032875 Thimo_1810 Thimo_1810 IPR036291 Thimo_1810 Thimo_1811 IPR000322 Glycoside hydrolase, family 31 Thimo_1811 IPR011013 Galactose mutarotase-like domain Thimo_1811 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_1811 IPR017853 Glycoside hydrolase, superfamily Thimo_1811 IPR025887 Glycoside hydrolase family 31, N-terminal domain Thimo_1811 IPR030458 Thimo_1811 Thimo_1811 IPR033403 Thimo_1811 Thimo_1812 IPR001845 HTH ArsR-type DNA-binding domain Thimo_1812 IPR036388 Thimo_1812 Thimo_1812 IPR036390 Thimo_1812 Thimo_1813 IPR023485 Phosphotyrosine protein phosphatase I superfamily Thimo_1813 IPR036196 Thimo_1813 Thimo_1814 IPR002657 Bile acid:sodium symporter Thimo_1814 IPR004706 Arsenical-resistance protein ACR3 Thimo_1814 IPR038770 Thimo_1814 Thimo_1815 IPR005524 Protein of unknown function DUF318, transmembrane Thimo_1816 IPR005243 Redox-active disulphide protein 2 Thimo_1816 IPR012336 Thioredoxin-like fold Thimo_1816 IPR036249 Thimo_1816 Thimo_1818 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thimo_1818 IPR004839 Aminotransferase, class I/classII Thimo_1818 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1818 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1818 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1819 IPR001650 Helicase, C-terminal Thimo_1819 IPR001943 UVR domain Thimo_1819 IPR004807 UvrABC system, subunit B Thimo_1819 IPR006935 Helicase/UvrB domain Thimo_1819 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1819 IPR024759 UvrB, YAD/RRR-motif-containing domain Thimo_1819 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1819 IPR036876 Thimo_1819 Thimo_1820 IPR009875 PilZ domain Thimo_1822 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Thimo_1822 IPR007627 RNA polymerase sigma-70 region 2 Thimo_1822 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Thimo_1822 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_1822 IPR013325 RNA polymerase sigma factor, region 2 Thimo_1822 IPR014284 RNA polymerase sigma-70 like domain Thimo_1822 IPR014286 RNA polymerase sigma-70 RpoE type Thimo_1822 IPR036388 Thimo_1822 Thimo_1823 IPR005572 Anti sigma-E protein RseA, N-terminal Thimo_1823 IPR036147 Thimo_1823 Thimo_1824 IPR005588 MucB/RseB Thimo_1824 IPR033434 Thimo_1824 Thimo_1824 IPR033436 Thimo_1824 Thimo_1824 IPR038484 Thimo_1824 Thimo_1825 IPR026268 Protein RseC Thimo_1826 IPR001478 PDZ domain Thimo_1826 IPR001940 Peptidase S1C Thimo_1826 IPR009003 Trypsin-like cysteine/serine peptidase domain Thimo_1826 IPR011782 Peptidase S1C, Do Thimo_1826 IPR036034 Thimo_1826 Thimo_1827 IPR000640 Translation elongation factor EFG, V domain Thimo_1827 IPR000795 Elongation factor, GTP-binding domain Thimo_1827 IPR005225 Small GTP-binding protein domain Thimo_1827 IPR006297 Elongation factor 4 Thimo_1827 IPR013842 GTP-binding protein LepA, C-terminal Thimo_1827 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1827 IPR031157 Thimo_1827 Thimo_1827 IPR035647 Thimo_1827 Thimo_1827 IPR038363 Thimo_1827 Thimo_1828 IPR000223 Peptidase S26A, signal peptidase I Thimo_1828 IPR015927 Peptidase S24/S26A/S26B/S26C Thimo_1828 IPR019756 Peptidase S26A, signal peptidase I, serine active site Thimo_1828 IPR019757 Peptidase S26A, signal peptidase I, lysine active site Thimo_1828 IPR036286 Thimo_1828 Thimo_1829 IPR032314 Thimo_1829 Thimo_1830 IPR000999 Ribonuclease III domain Thimo_1830 IPR011907 Ribonuclease III Thimo_1830 IPR014720 Double-stranded RNA-binding domain Thimo_1830 IPR036389 Thimo_1830 Thimo_1831 IPR004044 K Homology domain, type 2 Thimo_1831 IPR005225 Small GTP-binding protein domain Thimo_1831 IPR005662 GTP-binding protein Era Thimo_1831 IPR006073 GTP binding domain Thimo_1831 IPR009019 K homology domain, prokaryotic type Thimo_1831 IPR015946 K homology domain-like, alpha/beta Thimo_1831 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1832 IPR003717 Recombination protein O, RecO Thimo_1832 IPR012340 Nucleic acid-binding, OB-fold Thimo_1832 IPR022572 DNA replication/recombination mediator RecO, N-terminal Thimo_1832 IPR037278 Thimo_1832 Thimo_1833 IPR005835 Nucleotidyl transferase Thimo_1833 IPR011004 Trimeric LpxA-like Thimo_1833 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_1834 IPR003265 HhH-GPD domain Thimo_1834 IPR011257 DNA glycosylase Thimo_1834 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Thimo_1835 IPR036249 Thimo_1835 Thimo_1836 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1836 IPR007197 Radical SAM Thimo_1836 IPR013785 Aldolase-type TIM barrel Thimo_1837 IPR004680 Citrate transporter-like domain Thimo_1838 IPR010376 Domain of unknown function, DUF971 Thimo_1838 IPR038492 Thimo_1838 Thimo_1839 IPR001015 Ferrochelatase Thimo_1839 IPR019772 Ferrochelatase, active site Thimo_1840 IPR012312 Haemerythrin/HHE cation-binding motif Thimo_1841 IPR003148 Regulator of K+ conductance, N-terminal Thimo_1841 IPR013099 Two pore domain potassium channel domain Thimo_1841 IPR036291 Thimo_1841 Thimo_1843 IPR001757 Cation-transporting P-type ATPase Thimo_1843 IPR004014 Cation-transporting P-type ATPase, N-terminal Thimo_1843 IPR006068 Cation-transporting P-type ATPase, C-terminal Thimo_1843 IPR008250 P-type ATPase, A domain Thimo_1843 IPR018303 P-type ATPase, phosphorylation site Thimo_1843 IPR023214 HAD-like domain Thimo_1843 IPR023298 P-type ATPase, transmembrane domain Thimo_1843 IPR023299 P-type ATPase, cytoplasmic domain N Thimo_1843 IPR036412 Thimo_1843 Thimo_1844 IPR000073 Alpha/beta hydrolase fold-1 Thimo_1844 IPR002410 Peptidase S33 Thimo_1844 IPR005944 Proline iminopeptidase Thimo_1844 IPR029058 Alpha/Beta hydrolase fold Thimo_1845 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase Thimo_1845 IPR023509 D-Tyr tRNAtyr deacylase-like domain Thimo_1846 IPR000807 Imidazoleglycerol-phosphate dehydratase Thimo_1846 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site Thimo_1846 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_1846 IPR038494 Thimo_1846 Thimo_1847 IPR006062 Histidine biosynthesis Thimo_1847 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA Thimo_1847 IPR011060 Ribulose-phosphate binding barrel Thimo_1847 IPR013785 Aldolase-type TIM barrel Thimo_1847 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Thimo_1848 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain Thimo_1848 IPR026660 Phosphoribosyl-AMP cyclohydrolase Thimo_1848 IPR038019 Thimo_1848 Thimo_1849 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase Thimo_1849 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like Thimo_1850 IPR003369 Sec-independent protein translocase protein TatA/B/E Thimo_1850 IPR006312 Sec-independent protein translocase protein TatA/E Thimo_1851 IPR003369 Sec-independent protein translocase protein TatA/B/E Thimo_1851 IPR018448 Twin-arginine translocation protein TatB Thimo_1852 IPR002033 Sec-independent periplasmic protein translocase TatC Thimo_1852 IPR019820 Sec-independent periplasmic protein translocase, conserved site Thimo_1853 IPR000847 Transcription regulator HTH, LysR Thimo_1853 IPR005119 LysR, substrate-binding Thimo_1853 IPR036388 Thimo_1853 Thimo_1853 IPR036390 Thimo_1853 Thimo_1854 IPR006153 Cation/H+ exchanger Thimo_1854 IPR038770 Thimo_1854 Thimo_1855 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_1855 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_1856 IPR008302 Uncharacterised conserved protein UCP016719 Thimo_1857 IPR004651 Histidine biosynthesis, HisF Thimo_1857 IPR006062 Histidine biosynthesis Thimo_1857 IPR010139 Imidazole glycerol phosphate synthase, subunit H Thimo_1857 IPR011060 Ribulose-phosphate binding barrel Thimo_1857 IPR013785 Aldolase-type TIM barrel Thimo_1857 IPR014640 Imidazole glycerol phosphate synthase HisHF Thimo_1857 IPR017926 Glutamine amidotransferase Thimo_1857 IPR029062 Class I glutamine amidotransferase-like Thimo_1859 IPR000644 CBS domain Thimo_1859 IPR008915 Peptidase M50 Thimo_1859 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS Thimo_1860 IPR000951 Phthalate dioxygenase reductase Thimo_1860 IPR001433 Oxidoreductase FAD/NAD(P)-binding Thimo_1860 IPR017938 Riboflavin synthase-like beta-barrel Thimo_1860 IPR039261 Thimo_1860 Thimo_1861 IPR002818 ThiJ/PfpI Thimo_1861 IPR006286 Peptidase C56, PfpI Thimo_1861 IPR029062 Class I glutamine amidotransferase-like Thimo_1862 IPR036895 Thimo_1862 Thimo_1864 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Thimo_1864 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1864 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1864 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1865 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase Thimo_1865 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Thimo_1868 IPR001036 Acriflavin resistance protein Thimo_1868 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_1869 IPR006143 RND efflux pump, membrane fusion protein Thimo_1869 IPR032317 Thimo_1869 Thimo_1870 IPR002641 Patatin/Phospholipase A2-related Thimo_1870 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_1871 IPR011990 Tetratricopeptide-like helical domain Thimo_1872 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1873 IPR010177 Doubled CXXCH motif Thimo_1873 IPR029467 Cytochrome c3/c7 Thimo_1873 IPR036280 Thimo_1873 Thimo_1874 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit Thimo_1874 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_1874 IPR016174 Di-haem cytochrome, transmembrane Thimo_1875 IPR036280 Thimo_1875 Thimo_1876 IPR001986 Enolpyruvate transferase domain Thimo_1876 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Thimo_1876 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Thimo_1876 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site Thimo_1876 IPR036968 Thimo_1876 Thimo_1877 IPR003136 Cytidylate kinase Thimo_1877 IPR011994 Cytidylate kinase domain Thimo_1877 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1878 IPR000110 Ribosomal protein S1 Thimo_1878 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_1878 IPR012340 Nucleic acid-binding, OB-fold Thimo_1878 IPR022967 RNA-binding domain, S1 Thimo_1879 IPR000119 Histone-like bacterial DNA-binding protein Thimo_1879 IPR005685 Integration host factor, beta subunit Thimo_1879 IPR010992 Integration host factor (IHF)-like DNA-binding domain Thimo_1879 IPR020816 Histone-like DNA-binding protein, conserved site Thimo_1880 IPR001398 Macrophage migration inhibitory factor Thimo_1880 IPR014347 Tautomerase/MIF superfamily Thimo_1881 IPR007410 DR1885-like metal-binding protein Thimo_1881 IPR036182 Thimo_1881 Thimo_1883 IPR000551 MerR-type HTH domain Thimo_1883 IPR009061 DNA binding domain, putative Thimo_1885 IPR000415 Nitroreductase-like Thimo_1885 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE Thimo_1885 IPR029479 Nitroreductase Thimo_1886 IPR001845 HTH ArsR-type DNA-binding domain Thimo_1886 IPR036388 Thimo_1886 Thimo_1886 IPR036390 Thimo_1886 Thimo_1887 IPR005225 Small GTP-binding protein domain Thimo_1887 IPR006073 GTP binding domain Thimo_1887 IPR015946 K homology domain-like, alpha/beta Thimo_1887 IPR016484 GTP-binding protein EngA Thimo_1887 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1887 IPR032859 Thimo_1887 Thimo_1888 IPR002372 Pyrrolo-quinoline quinone repeat Thimo_1888 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily Thimo_1888 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_1888 IPR017687 Outer membrane protein assembly factor BamB Thimo_1888 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Thimo_1889 IPR011990 Tetratricopeptide-like helical domain Thimo_1889 IPR018704 Domain of unknown function DUF09976 Thimo_1889 IPR026039 Uncharacterised protein family UPF0070 Thimo_1890 IPR004154 Anticodon-binding Thimo_1890 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Thimo_1890 IPR015807 Histidine-tRNA ligase Thimo_1890 IPR036621 Thimo_1890 Thimo_1891 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_1891 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_1891 IPR025194 Domain of unknown function DUF4115 Thimo_1892 IPR011990 Tetratricopeptide-like helical domain Thimo_1892 IPR013360 Pilus biogenesis/stability type IV, PilW Thimo_1892 IPR019734 Tetratricopeptide repeat Thimo_1893 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr Thimo_1893 IPR007197 Radical SAM Thimo_1893 IPR013785 Aldolase-type TIM barrel Thimo_1893 IPR027492 Dual-specificity RNA methyltransferase RlmN Thimo_1894 IPR001564 Nucleoside diphosphate kinase Thimo_1894 IPR023005 Nucleoside diphosphate kinase, active site Thimo_1894 IPR034907 Thimo_1894 Thimo_1894 IPR036850 Thimo_1894 Thimo_1895 IPR005490 L,D-transpeptidase catalytic domain Thimo_1895 IPR038063 Thimo_1895 Thimo_1896 IPR015947 PUA-like domain Thimo_1896 IPR019614 S-adenosylmethionine-dependent methyltransferase Thimo_1896 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1896 IPR036974 Thimo_1896 Thimo_1899 IPR000845 Nucleoside phosphorylase domain Thimo_1899 IPR010044 Methylthioadenosine phosphorylase (MTAP) Thimo_1899 IPR035994 Thimo_1899 Thimo_1900 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Thimo_1900 IPR027016 Uncharacterised protein with YceI domain Thimo_1900 IPR036761 Thimo_1900 Thimo_1901 IPR001952 Alkaline phosphatase Thimo_1901 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Thimo_1901 IPR017850 Alkaline-phosphatase-like, core domain Thimo_1902 IPR008928 Six-hairpin glycosidase-like Thimo_1906 IPR008557 Protein of unknown function DUF839 Thimo_1908 IPR010985 Ribbon-helix-helix Thimo_1909 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_1909 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thimo_1910 IPR002145 Ribbon-helix-helix protein, copG Thimo_1910 IPR010985 Ribbon-helix-helix Thimo_1914 IPR000595 Cyclic nucleotide-binding domain Thimo_1914 IPR006685 Mechanosensitive ion channel MscS Thimo_1914 IPR010920 Like-Sm (LSM) domain Thimo_1914 IPR011066 Mechanosensitive ion channel MscS, C-terminal Thimo_1914 IPR014710 RmlC-like jelly roll fold Thimo_1914 IPR018490 Cyclic nucleotide-binding-like Thimo_1914 IPR023408 Thimo_1914 Thimo_1916 IPR000811 Glycosyl transferase, family 35 Thimo_1916 IPR011833 Glycogen/starch/alpha-glucan phosphorylase Thimo_1916 IPR035090 Thimo_1916 Thimo_1917 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase Thimo_1917 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_1917 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal Thimo_1917 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal Thimo_1917 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site Thimo_1917 IPR023962 Probable phosphoketolase Thimo_1917 IPR029061 Thiamin diphosphate-binding fold Thimo_1918 IPR000962 Zinc finger, DksA/TraR C4-type Thimo_1918 IPR012783 Zinc finger, C4 DksA/TraR-type Thimo_1919 IPR004113 FAD-linked oxidase, C-terminal Thimo_1919 IPR006094 FAD linked oxidase, N-terminal Thimo_1919 IPR016164 FAD-linked oxidase-like, C-terminal Thimo_1919 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thimo_1919 IPR036318 Thimo_1919 Thimo_1920 IPR004113 FAD-linked oxidase, C-terminal Thimo_1920 IPR006094 FAD linked oxidase, N-terminal Thimo_1920 IPR016164 FAD-linked oxidase-like, C-terminal Thimo_1920 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_1920 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thimo_1920 IPR036318 Thimo_1920 Thimo_1921 IPR004017 Cysteine-rich domain Thimo_1921 IPR009051 Alpha-helical ferredoxin Thimo_1921 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_1921 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_1922 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Thimo_1922 IPR001650 Helicase, C-terminal Thimo_1922 IPR011545 DEAD/DEAH box helicase domain Thimo_1922 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1922 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1923 IPR000504 RNA recognition motif domain Thimo_1923 IPR012677 Nucleotide-binding, alpha-beta plait Thimo_1923 IPR035979 Thimo_1923 Thimo_1924 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Thimo_1924 IPR002316 Proline-tRNA ligase, class IIa Thimo_1924 IPR004154 Anticodon-binding Thimo_1924 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type Thimo_1924 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Thimo_1924 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 Thimo_1924 IPR036621 Thimo_1924 Thimo_1924 IPR036754 Thimo_1924 Thimo_1925 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA Thimo_1925 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Thimo_1925 IPR029069 HotDog domain Thimo_1926 IPR000644 CBS domain Thimo_1926 IPR002550 Domain of unknown function DUF21 Thimo_1926 IPR005170 Transporter-associated domain Thimo_1926 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_1926 IPR036318 Thimo_1926 Thimo_1927 IPR006638 Elongator protein 3/MiaB/NifB Thimo_1927 IPR007197 Radical SAM Thimo_1928 IPR001763 Rhodanese-like domain Thimo_1928 IPR036873 Thimo_1928 Thimo_1929 IPR008526 Inner membrane protein YedI Thimo_1930 IPR001905 Ammonium transporter Thimo_1930 IPR018047 Ammonium transporter, conserved site Thimo_1930 IPR024041 Ammonium transporter AmtB-like domain Thimo_1930 IPR029020 Ammonium/urea transporter Thimo_1931 IPR001036 Acriflavin resistance protein Thimo_1931 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_1932 IPR006143 RND efflux pump, membrane fusion protein Thimo_1932 IPR032317 Thimo_1932 Thimo_1933 IPR002505 Phosphate acetyl/butaryl transferase Thimo_1933 IPR004614 Phosphate acetyltransferase Thimo_1933 IPR010766 DRTGG Thimo_1933 IPR016475 Phosphate acetyltransferase, bacteria Thimo_1933 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1933 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like Thimo_1934 IPR000890 Aliphatic acid kinase, short-chain Thimo_1934 IPR004372 Acetate/Proprionate kinase Thimo_1934 IPR023865 Aliphatic acid kinase, short-chain, conserved site Thimo_1935 IPR009875 PilZ domain Thimo_1936 IPR000192 Aminotransferase class V domain Thimo_1936 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_1936 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_1936 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_1937 IPR004010 Cache domain Thimo_1937 IPR033480 Thimo_1937 Thimo_1939 IPR001296 Glycosyl transferase, family 1 Thimo_1939 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1941 IPR001623 DnaJ domain Thimo_1941 IPR002939 Chaperone DnaJ, C-terminal Thimo_1941 IPR008971 HSP40/DnaJ peptide-binding Thimo_1941 IPR018253 DnaJ domain, conserved site Thimo_1941 IPR036869 Thimo_1941 Thimo_1942 IPR003593 AAA+ ATPase domain Thimo_1942 IPR003959 ATPase, AAA-type, core Thimo_1942 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1943 IPR003675 CAAX amino terminal protease Thimo_1944 IPR002201 Glycosyl transferase, family 9 Thimo_1945 IPR001296 Glycosyl transferase, family 1 Thimo_1945 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1946 IPR001296 Glycosyl transferase, family 1 Thimo_1946 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal Thimo_1946 IPR038107 Thimo_1946 Thimo_1947 IPR001646 Pentapeptide repeat Thimo_1948 IPR002650 Sulphate adenylyltransferase Thimo_1948 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1948 IPR015947 PUA-like domain Thimo_1948 IPR020792 Sulphate adenylyltransferase, subgroup Thimo_1948 IPR024951 Sulphate adenylyltransferase catalytic domain Thimo_1948 IPR025980 ATP-sulfurylase PUA-like domain Thimo_1950 IPR012434 Protein of unknown function DUF1631 Thimo_1951 IPR000189 Prokaryotic transglycosylase, active site Thimo_1951 IPR008258 Lytic transglycosylase-like SLT domain Thimo_1951 IPR023346 Lysozyme-like domain Thimo_1951 IPR025392 Domain of unknown function DUF4124 Thimo_1952 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Thimo_1952 IPR010275 Protein of unknown function DUF882 Thimo_1953 IPR001900 Thimo_1953 Thimo_1953 IPR012340 Nucleic acid-binding, OB-fold Thimo_1953 IPR036388 Thimo_1953 Thimo_1954 IPR006222 Glycine cleavage T-protein, N-terminal Thimo_1954 IPR017703 YgfZ/GcvT conserved site Thimo_1954 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA Thimo_1954 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain Thimo_1955 IPR002313 Lysine-tRNA ligase, class II Thimo_1955 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thimo_1955 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thimo_1955 IPR012340 Nucleic acid-binding, OB-fold Thimo_1955 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Thimo_1957 IPR001792 Acylphosphatase-like domain Thimo_1957 IPR004421 Carbamoyltransferase, HypF-type Thimo_1957 IPR006070 YrdC-like domain Thimo_1957 IPR011125 Zinc finger, HypF-type Thimo_1957 IPR017945 DHBP synthase RibB-like alpha/beta domain Thimo_1957 IPR017968 Acylphosphatase, conserved site Thimo_1957 IPR036046 Thimo_1957 Thimo_1958 IPR000594 UBA/THIF-type NAD/FAD binding fold Thimo_1958 IPR035985 Thimo_1958 Thimo_1959 IPR001130 TatD family Thimo_1959 IPR018228 Deoxyribonuclease, TatD-related, conserved site Thimo_1959 IPR032466 Thimo_1959 Thimo_1960 IPR021139 NYN domain, limkain-b1-type Thimo_1960 IPR025605 OST-HTH/LOTUS domain Thimo_1961 IPR018636 Protein of unknown function DUF2058 Thimo_1962 IPR005632 Chaperone protein Skp Thimo_1962 IPR024930 Skp domain Thimo_1963 IPR007420 Protein of unknown function DUF465 Thimo_1964 IPR001279 Beta-lactamase-like Thimo_1964 IPR036866 Thimo_1964 Thimo_1965 IPR007139 Protein of unknown function DUF349 Thimo_1966 IPR006015 Universal stress protein A Thimo_1966 IPR006016 UspA Thimo_1966 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_1967 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain Thimo_1967 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal Thimo_1967 IPR005482 Biotin carboxylase, C-terminal Thimo_1967 IPR011054 Rudiment single hybrid motif Thimo_1967 IPR016185 Pre-ATP-grasp domain Thimo_1968 IPR000089 Biotin/lipoyl attachment Thimo_1968 IPR000891 Pyruvate carboxyltransferase Thimo_1968 IPR003379 Carboxylase, conserved domain Thimo_1968 IPR005776 Oxaloacetate decarboxylase, alpha subunit Thimo_1968 IPR011053 Single hybrid motif Thimo_1968 IPR013785 Aldolase-type TIM barrel Thimo_1970 IPR001763 Rhodanese-like domain Thimo_1970 IPR036873 Thimo_1970 Thimo_1971 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thimo_1971 IPR036249 Thimo_1971 Thimo_1972 IPR003010 Carbon-nitrogen hydrolase Thimo_1972 IPR036526 Thimo_1972 Thimo_1973 IPR003752 Disulphide bond formation protein DsbB/BdbC Thimo_1973 IPR023380 Disulphide bond formation protein DsbB-like domain Thimo_1974 IPR000189 Prokaryotic transglycosylase, active site Thimo_1974 IPR006597 Sel1-like Thimo_1974 IPR008258 Lytic transglycosylase-like SLT domain Thimo_1974 IPR011990 Tetratricopeptide-like helical domain Thimo_1974 IPR023346 Lysozyme-like domain Thimo_1975 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating Thimo_1975 IPR006114 6-phosphogluconate dehydrogenase, C-terminal Thimo_1975 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thimo_1975 IPR006183 Thimo_1975 Thimo_1975 IPR006184 6-phosphogluconate-binding site Thimo_1975 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_1975 IPR013328 Dehydrogenase, multihelical Thimo_1975 IPR036291 Thimo_1975 Thimo_1976 IPR001296 Glycosyl transferase, family 1 Thimo_1976 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_1979 IPR001036 Acriflavin resistance protein Thimo_1979 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thimo_1979 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_1980 IPR006143 RND efflux pump, membrane fusion protein Thimo_1981 IPR002509 Polysaccharide deacetylase Thimo_1981 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_1982 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_1982 IPR036165 Thimo_1982 Thimo_1984 IPR006935 Helicase/UvrB domain Thimo_1984 IPR013670 EcoEI R protein C-terminal domain Thimo_1984 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_1984 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1984 IPR029464 Type I restriction enzyme R protein, N-terminal domain Thimo_1985 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_1985 IPR003356 DNA methylase, adenine-specific Thimo_1985 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thimo_1985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_1985 IPR038333 Thimo_1985 Thimo_1986 IPR007460 Burkholderia phage Bups phi1, Orf7.3 Thimo_1988 IPR002934 Nucleotidyl transferase domain Thimo_1989 IPR008201 Protein of unknown function DUF86 Thimo_1990 IPR000055 Restriction endonuclease, type I, HsdS Thimo_1991 IPR007367 Protein of unknown function DUF433 Thimo_1991 IPR009057 Homeodomain-like Thimo_1991 IPR036388 Thimo_1991 Thimo_1995 IPR003439 ABC transporter-like Thimo_1995 IPR003593 AAA+ ATPase domain Thimo_1995 IPR017871 ABC transporter, conserved site Thimo_1995 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1996 IPR003495 CobW/HypB/UreG domain Thimo_1996 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase Thimo_1996 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_1999 IPR005527 Septum formation topological specificity factor MinE Thimo_1999 IPR036707 Thimo_1999 Thimo_2000 IPR010223 ATP binding protein MinD, bacterial-type Thimo_2000 IPR025501 ATP binding protein MinD Thimo_2000 IPR025669 AAA domain Thimo_2000 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2001 IPR005526 Septum formation inhibitor MinC, C-terminal Thimo_2001 IPR007874 Septum formation inhibitor MinC, N-terminal Thimo_2001 IPR013033 Septum formation inhibitor MinC Thimo_2001 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal Thimo_2001 IPR036145 Thimo_2001 Thimo_2001 IPR038061 Thimo_2001 Thimo_2002 IPR001310 Histidine triad (HIT) protein Thimo_2002 IPR019808 Histidine triad, conserved site Thimo_2002 IPR036265 Thimo_2002 Thimo_2003 IPR000093 DNA recombination protein RecR Thimo_2003 IPR006171 Toprim domain Thimo_2003 IPR015967 Recombination protein RecR, conserved site Thimo_2003 IPR023627 Recombination protein RecR Thimo_2003 IPR023628 Recombination protein RecR, C4-type zinc finger Thimo_2004 IPR004401 Nucleoid-associated protein YbaB Thimo_2004 IPR036894 Thimo_2004 Thimo_2006 IPR003953 FAD binding domain Thimo_2006 IPR005288 L-aspartate oxidase Thimo_2006 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal Thimo_2006 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Thimo_2006 IPR036188 Thimo_2006 Thimo_2006 IPR037099 Thimo_2006 Thimo_2007 IPR003439 ABC transporter-like Thimo_2007 IPR003593 AAA+ ATPase domain Thimo_2007 IPR017871 ABC transporter, conserved site Thimo_2007 IPR022374 ABC transporter, ATP-binding protein, ChvD Thimo_2007 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2007 IPR032781 Thimo_2007 Thimo_2008 IPR000014 PAS domain Thimo_2008 IPR000160 GGDEF domain Thimo_2008 IPR001633 EAL domain Thimo_2008 IPR013767 PAS fold Thimo_2008 IPR029787 Nucleotide cyclase Thimo_2008 IPR035919 Thimo_2008 Thimo_2008 IPR035965 Thimo_2008 Thimo_2009 IPR008533 Domain of unknown function DUF815 Thimo_2009 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2010 IPR032389 Thimo_2010 Thimo_2011 IPR002477 Peptidoglycan binding-like Thimo_2011 IPR003593 AAA+ ATPase domain Thimo_2011 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2011 IPR036365 Thimo_2011 Thimo_2011 IPR036366 Thimo_2011 Thimo_2012 IPR007835 MOFRL domain Thimo_2012 IPR025286 MOFRL-associated domain Thimo_2012 IPR037035 Thimo_2012 Thimo_2012 IPR038614 Thimo_2012 Thimo_2013 IPR008928 Six-hairpin glycosidase-like Thimo_2013 IPR024746 Glycosyl hydrolase family 100 Thimo_2013 IPR032790 Thimo_2013 Thimo_2015 IPR002549 Uncharacterised protein family UPF0118 Thimo_2016 IPR000160 GGDEF domain Thimo_2016 IPR001633 EAL domain Thimo_2016 IPR012434 Protein of unknown function DUF1631 Thimo_2016 IPR029787 Nucleotide cyclase Thimo_2016 IPR035919 Thimo_2016 Thimo_2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Thimo_2017 IPR002933 Peptidase M20 Thimo_2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria Thimo_2017 IPR011650 Peptidase M20, dimerisation domain Thimo_2017 IPR036264 Thimo_2017 Thimo_2018 IPR007527 Zinc finger, SWIM-type Thimo_2019 IPR000330 SNF2-related Thimo_2019 IPR001650 Helicase, C-terminal Thimo_2019 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2019 IPR022138 Helicase SWF/SNF-related Thimo_2019 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2019 IPR038718 Thimo_2019 Thimo_2020 IPR036365 Thimo_2020 Thimo_2023 IPR002559 Transposase, IS4-like Thimo_2023 IPR008490 Transposase InsH, N-terminal Thimo_2024 IPR000192 Aminotransferase class V domain Thimo_2024 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2024 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2024 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2024 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Thimo_2025 IPR011635 APHP Thimo_2026 IPR000524 Transcription regulator HTH, GntR Thimo_2026 IPR004839 Aminotransferase, class I/classII Thimo_2026 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2026 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2026 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2026 IPR036388 Thimo_2026 Thimo_2026 IPR036390 Thimo_2026 Thimo_2027 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2028 IPR001584 Integrase, catalytic core Thimo_2028 IPR012337 Ribonuclease H-like domain Thimo_2028 IPR025948 HTH-like domain Thimo_2028 IPR036397 Thimo_2028 Thimo_2029 IPR002514 Transposase IS3/IS911family Thimo_2029 IPR009057 Homeodomain-like Thimo_2029 IPR036388 Thimo_2029 Thimo_2034 IPR011518 Transposase, Rhodopirellula-type Thimo_2036 IPR007457 Fe(II) trafficking protein YggX Thimo_2036 IPR036766 Thimo_2036 Thimo_2037 IPR000445 Helix-hairpin-helix motif Thimo_2037 IPR003265 HhH-GPD domain Thimo_2037 IPR004036 Endonuclease III-like, conserved site-2 Thimo_2037 IPR005760 A/G-specific adenine glycosylase MutY Thimo_2037 IPR011257 DNA glycosylase Thimo_2037 IPR015797 NUDIX hydrolase domain-like Thimo_2037 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Thimo_2037 IPR029119 MutY, C-terminal Thimo_2038 IPR007844 AsmA Thimo_2040 IPR000873 AMP-dependent synthetase/ligase Thimo_2040 IPR020459 AMP-binding Thimo_2040 IPR020845 AMP-binding, conserved site Thimo_2041 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Thimo_2041 IPR010035 ThiS, thiamine-biosynthesis Thimo_2041 IPR012675 Beta-grasp domain Thimo_2041 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thimo_2042 IPR008867 Thiazole biosynthesis Thimo_2042 IPR013785 Aldolase-type TIM barrel Thimo_2042 IPR033983 Thimo_2042 Thimo_2043 IPR003358 tRNA (guanine-N-7) methyltransferase Thimo_2043 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2044 IPR003439 ABC transporter-like Thimo_2044 IPR003593 AAA+ ATPase domain Thimo_2044 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2045 IPR005226 UPF0014 family Thimo_2046 IPR002575 Aminoglycoside phosphotransferase Thimo_2046 IPR011009 Protein kinase-like domain Thimo_2046 IPR032882 Thimo_2046 Thimo_2047 IPR019600 Hemin uptake protein HemP Thimo_2049 IPR002024 Bacterioferritin Thimo_2049 IPR008331 Ferritin/DPS protein domain Thimo_2049 IPR009078 Ferritin-like superfamily Thimo_2049 IPR012347 Ferritin-related Thimo_2050 IPR002024 Bacterioferritin Thimo_2050 IPR008331 Ferritin/DPS protein domain Thimo_2050 IPR009078 Ferritin-like superfamily Thimo_2050 IPR012347 Ferritin-related Thimo_2051 IPR007419 BFD-like [2Fe-2S]-binding domain Thimo_2054 IPR016772 Uncharacterised conserved protein UCP020408 Thimo_2055 IPR000014 PAS domain Thimo_2055 IPR000160 GGDEF domain Thimo_2055 IPR001610 PAC motif Thimo_2055 IPR001633 EAL domain Thimo_2055 IPR003018 GAF domain Thimo_2055 IPR013655 PAS fold-3 Thimo_2055 IPR029016 GAF domain-like Thimo_2055 IPR029787 Nucleotide cyclase Thimo_2055 IPR035919 Thimo_2055 Thimo_2055 IPR035965 Thimo_2055 Thimo_2056 IPR006143 RND efflux pump, membrane fusion protein Thimo_2056 IPR032317 Thimo_2056 Thimo_2057 IPR001036 Acriflavin resistance protein Thimo_2057 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_2058 IPR001736 Phospholipase D/Transphosphatidylase Thimo_2058 IPR022924 Cardiolipin synthase Thimo_2058 IPR025202 Phospholipase D-like domain Thimo_2058 IPR027379 Cardiolipin synthase N-terminal Thimo_2059 IPR001100 Thimo_2059 Thimo_2059 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thimo_2059 IPR016156 FAD/NAD-linked reductase, dimerisation domain Thimo_2059 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_2059 IPR036188 Thimo_2059 Thimo_2062 IPR001789 Signal transduction response regulator, receiver domain Thimo_2062 IPR001867 Signal transduction response regulator, C-terminal Thimo_2062 IPR011006 CheY-like superfamily Thimo_2062 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2062 IPR036388 Thimo_2062 Thimo_2063 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2063 IPR003660 HAMP linker domain Thimo_2063 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2063 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2063 IPR029151 Periplasmic sensor domain-like Thimo_2063 IPR033463 Thimo_2063 Thimo_2063 IPR036097 Thimo_2063 Thimo_2063 IPR036890 Thimo_2063 Thimo_2064 IPR010364 Uncharacterised protein family, inner membrane CreD Thimo_2065 IPR032720 Thimo_2065 Thimo_2068 IPR012654 Conserved hypothetical protein CHP02391 Thimo_2069 IPR005490 L,D-transpeptidase catalytic domain Thimo_2069 IPR038063 Thimo_2069 Thimo_2070 IPR000515 MetI-like domain Thimo_2070 IPR035906 Thimo_2070 Thimo_2071 IPR000515 MetI-like domain Thimo_2071 IPR035906 Thimo_2071 Thimo_2072 IPR001764 Glycoside hydrolase, family 3, N-terminal Thimo_2072 IPR017853 Glycoside hydrolase, superfamily Thimo_2072 IPR019800 Glycoside hydrolase, family 3, active site Thimo_2072 IPR022956 Beta-hexosaminidase, bacterial Thimo_2072 IPR036962 Thimo_2072 Thimo_2073 IPR000836 Phosphoribosyltransferase domain Thimo_2073 IPR029057 Phosphoribosyltransferase-like Thimo_2074 IPR012312 Haemerythrin/HHE cation-binding motif Thimo_2075 IPR000415 Nitroreductase-like Thimo_2075 IPR029479 Nitroreductase Thimo_2076 IPR003374 ApbE-like domain Thimo_2076 IPR024932 Flavin transferase ApbE Thimo_2077 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Thimo_2077 IPR002942 RNA-binding S4 domain Thimo_2077 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Thimo_2077 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Thimo_2077 IPR020103 Pseudouridine synthase, catalytic domain Thimo_2077 IPR036986 Thimo_2077 Thimo_2078 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Thimo_2078 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_2078 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial Thimo_2078 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding Thimo_2078 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2078 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thimo_2078 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 Thimo_2080 IPR002934 Nucleotidyl transferase domain Thimo_2081 IPR000924 Glutamyl/glutaminyl-tRNA synthetase Thimo_2081 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_2081 IPR004514 Glutamine-tRNA synthetase Thimo_2081 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Thimo_2081 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2081 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Thimo_2081 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thimo_2081 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain Thimo_2081 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain Thimo_2081 IPR022861 Glutamine-tRNA ligase, bacterial Thimo_2082 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_2082 IPR003593 AAA+ ATPase domain Thimo_2082 IPR004665 Transcription termination factor Rho Thimo_2082 IPR011112 Rho termination factor, N-terminal Thimo_2082 IPR011113 Rho termination factor, RNA-binding Thimo_2082 IPR011129 Cold shock protein Thimo_2082 IPR012340 Nucleic acid-binding, OB-fold Thimo_2082 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2082 IPR036269 Thimo_2082 Thimo_2083 IPR005746 Thioredoxin Thimo_2083 IPR013766 Thioredoxin domain Thimo_2083 IPR017937 Thioredoxin, conserved site Thimo_2083 IPR036249 Thimo_2083 Thimo_2084 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Thimo_2084 IPR001650 Helicase, C-terminal Thimo_2084 IPR011545 DEAD/DEAH box helicase domain Thimo_2084 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2084 IPR023554 RNA helicase, ATP-dependent, RhlB-type Thimo_2084 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2085 IPR006439 HAD hydrolase, subfamily IA Thimo_2085 IPR023214 HAD-like domain Thimo_2085 IPR036412 Thimo_2085 Thimo_2086 IPR000086 NUDIX hydrolase domain Thimo_2086 IPR015797 NUDIX hydrolase domain-like Thimo_2086 IPR020084 NUDIX hydrolase, conserved site Thimo_2087 IPR001807 Chloride channel, voltage gated Thimo_2087 IPR014743 Chloride channel, core Thimo_2088 IPR004776 Auxin efflux carrier Thimo_2089 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal Thimo_2089 IPR013785 Aldolase-type TIM barrel Thimo_2090 IPR016024 Armadillo-type fold Thimo_2091 IPR004368 Translation initiation factor IF-1 Thimo_2091 IPR006196 RNA-binding domain, S1, IF1 type Thimo_2091 IPR012340 Nucleic acid-binding, OB-fold Thimo_2091 IPR022967 RNA-binding domain, S1 Thimo_2092 IPR001270 ClpA/B family Thimo_2092 IPR003593 AAA+ ATPase domain Thimo_2092 IPR003959 ATPase, AAA-type, core Thimo_2092 IPR004176 Clp, N-terminal Thimo_2092 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA Thimo_2092 IPR018368 ClpA/B, conserved site 1 Thimo_2092 IPR019489 Clp ATPase, C-terminal Thimo_2092 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2092 IPR028299 ClpA/B, conserved site 2 Thimo_2092 IPR036628 Thimo_2092 Thimo_2093 IPR003769 Adaptor protein ClpS, core Thimo_2093 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thimo_2093 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Thimo_2094 IPR002059 Cold-shock protein, DNA-binding Thimo_2094 IPR011129 Cold shock protein Thimo_2094 IPR012156 Cold shock, CspA Thimo_2094 IPR012340 Nucleic acid-binding, OB-fold Thimo_2094 IPR012751 CspD, cold shock Thimo_2095 IPR004506 tRNA-specific 2-thiouridylase Thimo_2095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2095 IPR023382 Adenine nucleotide alpha hydrolase-like domains Thimo_2096 IPR007451 Uncharacterised protein family UPF0274 Thimo_2096 IPR035932 Thimo_2096 Thimo_2098 IPR000905 Gcp-like domain Thimo_2098 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ Thimo_2099 IPR006555 ATP-dependent helicase, C-terminal Thimo_2099 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2099 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2100 IPR011990 Tetratricopeptide-like helical domain Thimo_2101 IPR001264 Glycosyl transferase, family 51 Thimo_2101 IPR001460 Penicillin-binding protein, transpeptidase Thimo_2101 IPR011813 Penicillin-binding protein 1B Thimo_2101 IPR012338 Beta-lactamase/transpeptidase-like Thimo_2101 IPR023346 Lysozyme-like domain Thimo_2101 IPR028166 Bifunctional transglycosylase second domain Thimo_2101 IPR036950 Thimo_2101 Thimo_2102 IPR000412 ABC-2 transporter Thimo_2102 IPR013525 ABC-2 type transporter Thimo_2103 IPR003439 ABC transporter-like Thimo_2103 IPR003593 AAA+ ATPase domain Thimo_2103 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2105 IPR007332 Protein of unknown function DUF411 Thimo_2105 IPR036249 Thimo_2105 Thimo_2106 IPR021866 SpoIIAA-like Thimo_2106 IPR036513 Thimo_2106 Thimo_2106 IPR038396 Thimo_2106 Thimo_2109 IPR000432 DNA mismatch repair protein MutS, C-terminal Thimo_2109 IPR005748 DNA mismatch repair protein MutS, type 1 Thimo_2109 IPR007695 DNA mismatch repair protein MutS-like, N-terminal Thimo_2109 IPR007696 DNA mismatch repair protein MutS, core Thimo_2109 IPR007860 DNA mismatch repair protein MutS, connector domain Thimo_2109 IPR007861 DNA mismatch repair protein MutS, clamp Thimo_2109 IPR016151 DNA mismatch repair protein MutS, N-terminal Thimo_2109 IPR017261 DNA mismatch repair protein Msh6 Thimo_2109 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2109 IPR036187 Thimo_2109 Thimo_2109 IPR036678 Thimo_2109 Thimo_2110 IPR012908 GPI inositol-deacylase PGAP1-like Thimo_2110 IPR029058 Alpha/Beta hydrolase fold Thimo_2111 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_2111 IPR006316 Tryptophan synthase, beta chain-like Thimo_2111 IPR006653 Tryptophan synthase, beta chain, conserved site Thimo_2111 IPR023026 Tryptophan synthase beta chain/beta chain-like Thimo_2111 IPR036052 Thimo_2111 Thimo_2112 IPR000121 PEP-utilising enzyme, C-terminal Thimo_2112 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Thimo_2112 IPR006319 Phosphoenolpyruvate synthase Thimo_2112 IPR008279 PEP-utilising enzyme, mobile domain Thimo_2112 IPR013815 ATP-grasp fold, subdomain 1 Thimo_2112 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_2112 IPR018274 PEP-utilising enzyme, active site Thimo_2112 IPR023151 PEP-utilising enzyme, conserved site Thimo_2112 IPR036637 Thimo_2112 Thimo_2113 IPR011226 ATP-grasp family Thimo_2113 IPR013815 ATP-grasp fold, subdomain 1 Thimo_2115 IPR001789 Signal transduction response regulator, receiver domain Thimo_2115 IPR001867 Signal transduction response regulator, C-terminal Thimo_2115 IPR011006 CheY-like superfamily Thimo_2115 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2115 IPR036388 Thimo_2115 Thimo_2116 IPR001206 Diacylglycerol kinase, catalytic domain Thimo_2116 IPR005218 Diacylglycerol/lipid kinase Thimo_2116 IPR016064 ATP-NAD kinase-like domain Thimo_2116 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Thimo_2119 IPR011737 Conserved hypothetical protein CHP02206, TP0381 Thimo_2120 IPR018692 Protein of unknown function DUF2189 Thimo_2121 IPR021796 Protein of unknown function DUF3365 Thimo_2123 IPR002937 Amine oxidase Thimo_2123 IPR036188 Thimo_2123 Thimo_2124 IPR010292 Uncharacterised protein family CreA Thimo_2126 IPR002110 Ankyrin repeat Thimo_2126 IPR020683 Ankyrin repeat-containing domain Thimo_2126 IPR036770 Thimo_2126 Thimo_2128 IPR012337 Ribonuclease H-like domain Thimo_2128 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_2128 IPR013620 Exonuclease C-terminal Thimo_2128 IPR023607 Exodeoxyribonuclease I Thimo_2128 IPR036397 Thimo_2128 Thimo_2128 IPR038649 Thimo_2128 Thimo_2129 IPR001857 Ribosomal protein L19 Thimo_2129 IPR008991 Translation protein SH3-like domain Thimo_2129 IPR018257 Ribosomal protein L19, conserved site Thimo_2129 IPR038657 Thimo_2129 Thimo_2130 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria Thimo_2130 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain Thimo_2130 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal Thimo_2130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_2130 IPR029028 Alpha/beta knot methyltransferases Thimo_2131 IPR002676 RimM protein Thimo_2131 IPR009000 Translation protein, beta-barrel domain Thimo_2131 IPR011033 PRC-barrel-like Thimo_2131 IPR011961 16S rRNA processing protein RimM Thimo_2131 IPR036976 Thimo_2131 Thimo_2132 IPR000307 Ribosomal protein S16 Thimo_2132 IPR020592 Ribosomal protein S16, conserved site Thimo_2132 IPR023803 Ribosomal protein S16 domain Thimo_2133 IPR000644 CBS domain Thimo_2133 IPR006667 SLC41 divalent cation transporters, integral membrane domain Thimo_2133 IPR006668 Magnesium transporter, MgtE intracellular domain Thimo_2133 IPR006669 Magnesium transporter MgtE Thimo_2133 IPR036739 Thimo_2133 Thimo_2133 IPR038048 Thimo_2133 Thimo_2133 IPR038076 Thimo_2133 Thimo_2134 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site Thimo_2134 IPR001650 Helicase, C-terminal Thimo_2134 IPR005580 DbpA, RNA-binding Thimo_2134 IPR011545 DEAD/DEAH box helicase domain Thimo_2134 IPR012677 Nucleotide-binding, alpha-beta plait Thimo_2134 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2134 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2134 IPR028618 ATP-dependent RNA helicase DeaD Thimo_2135 IPR003791 Protein of unknown function UPF0178 Thimo_2136 IPR000170 High potential iron-sulphur protein Thimo_2136 IPR036369 Thimo_2136 Thimo_2137 IPR000064 Endopeptidase, NLPC/P60 domain Thimo_2137 IPR038765 Thimo_2137 Thimo_2138 IPR005586 Protein of unknown function DUF330 Thimo_2140 IPR005182 Domain of unknown function DUF304 Thimo_2141 IPR011051 RmlC-like cupin domain Thimo_2141 IPR013096 Cupin 2, conserved barrel Thimo_2141 IPR014710 RmlC-like jelly roll fold Thimo_2142 IPR003593 AAA+ ATPase domain Thimo_2142 IPR004602 UvrABC system subunit A Thimo_2142 IPR017871 ABC transporter, conserved site Thimo_2142 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2144 IPR007263 Protein of unknown function DUF393 Thimo_2144 IPR036249 Thimo_2144 Thimo_2145 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2145 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2145 IPR036097 Thimo_2145 Thimo_2145 IPR036890 Thimo_2145 Thimo_2146 IPR001789 Signal transduction response regulator, receiver domain Thimo_2146 IPR001867 Signal transduction response regulator, C-terminal Thimo_2146 IPR011006 CheY-like superfamily Thimo_2146 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2146 IPR036388 Thimo_2146 Thimo_2149 IPR002035 von Willebrand factor, type A Thimo_2149 IPR036465 Thimo_2149 Thimo_2151 IPR009057 Homeodomain-like Thimo_2151 IPR012337 Ribonuclease H-like domain Thimo_2151 IPR025959 Winged helix-turn helix domain Thimo_2151 IPR038717 Thimo_2151 Thimo_2153 IPR025295 Domain of unknown function DUF4157 Thimo_2155 IPR003439 ABC transporter-like Thimo_2155 IPR003593 AAA+ ATPase domain Thimo_2155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Thimo_2155 IPR017871 ABC transporter, conserved site Thimo_2155 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2156 IPR003439 ABC transporter-like Thimo_2156 IPR003593 AAA+ ATPase domain Thimo_2156 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Thimo_2156 IPR017871 ABC transporter, conserved site Thimo_2156 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2157 IPR000515 MetI-like domain Thimo_2157 IPR035906 Thimo_2157 Thimo_2158 IPR000515 MetI-like domain Thimo_2158 IPR035906 Thimo_2158 Thimo_2159 IPR000914 Bacterial extracellular solute-binding protein, family 5 Thimo_2160 IPR001902 Sulphate anion transporter Thimo_2160 IPR002645 STAS domain Thimo_2160 IPR011547 Sulphate transporter Thimo_2160 IPR036513 Thimo_2160 Thimo_2161 IPR006664 Outer membrane protein, bacterial Thimo_2161 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_2161 IPR036737 Thimo_2161 Thimo_2162 IPR000788 Ribonucleotide reductase large subunit, C-terminal Thimo_2162 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent Thimo_2164 IPR001734 Sodium/solute symporter Thimo_2164 IPR011851 Sodium/proline symporter Thimo_2164 IPR018212 Sodium/solute symporter, conserved site Thimo_2164 IPR038377 Thimo_2164 Thimo_2165 IPR001789 Signal transduction response regulator, receiver domain Thimo_2165 IPR011006 CheY-like superfamily Thimo_2166 IPR003439 ABC transporter-like Thimo_2166 IPR003593 AAA+ ATPase domain Thimo_2166 IPR011527 ABC transporter type 1, transmembrane domain Thimo_2166 IPR017871 ABC transporter, conserved site Thimo_2166 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2166 IPR036640 Thimo_2166 Thimo_2167 IPR000977 DNA ligase, ATP-dependent Thimo_2167 IPR012308 DNA ligase, ATP-dependent, N-terminal Thimo_2167 IPR012309 DNA ligase, ATP-dependent, C-terminal Thimo_2167 IPR012310 DNA ligase, ATP-dependent, central Thimo_2167 IPR012340 Nucleic acid-binding, OB-fold Thimo_2167 IPR016059 DNA ligase, ATP-dependent, conserved site Thimo_2167 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal Thimo_2167 IPR036599 Thimo_2167 Thimo_2168 IPR003718 OsmC/Ohr family Thimo_2168 IPR015946 K homology domain-like, alpha/beta Thimo_2168 IPR036102 Thimo_2168 Thimo_2169 IPR011033 PRC-barrel-like Thimo_2169 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal Thimo_2170 IPR000192 Aminotransferase class V domain Thimo_2170 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site Thimo_2170 IPR006656 Molybdopterin oxidoreductase Thimo_2170 IPR006657 Molydopterin dinucleotide-binding domain Thimo_2170 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thimo_2170 IPR009010 Aspartate decarboxylase-like domain Thimo_2170 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2170 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2170 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2171 IPR000595 Cyclic nucleotide-binding domain Thimo_2171 IPR014710 RmlC-like jelly roll fold Thimo_2171 IPR018490 Cyclic nucleotide-binding-like Thimo_2172 IPR000771 Ketose-bisphosphate aldolase, class-II Thimo_2172 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype Thimo_2172 IPR013785 Aldolase-type TIM barrel Thimo_2173 IPR001697 Pyruvate kinase Thimo_2173 IPR011037 Pyruvate kinase-like, insert domain Thimo_2173 IPR015793 Pyruvate kinase, barrel Thimo_2173 IPR015795 Pyruvate kinase, C-terminal Thimo_2173 IPR015806 Pyruvate kinase, beta-barrel insert domain Thimo_2173 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_2173 IPR036918 Thimo_2173 Thimo_2174 IPR001576 Phosphoglycerate kinase Thimo_2174 IPR015824 Phosphoglycerate kinase, N-terminal Thimo_2174 IPR015911 Phosphoglycerate kinase, conserved site Thimo_2174 IPR036043 Thimo_2174 Thimo_2175 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I Thimo_2175 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain Thimo_2175 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain Thimo_2175 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site Thimo_2175 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family Thimo_2175 IPR036291 Thimo_2175 Thimo_2176 IPR005474 Transketolase, N-terminal Thimo_2176 IPR005475 Transketolase-like, pyrimidine-binding domain Thimo_2176 IPR005478 Transketolase, bacterial-like Thimo_2176 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II Thimo_2176 IPR020826 Transketolase binding site Thimo_2176 IPR029061 Thiamin diphosphate-binding fold Thimo_2176 IPR033248 Thimo_2176 Thimo_2177 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thimo_2177 IPR036249 Thimo_2177 Thimo_2178 IPR002133 S-adenosylmethionine synthetase Thimo_2178 IPR022628 S-adenosylmethionine synthetase, N-terminal Thimo_2178 IPR022629 S-adenosylmethionine synthetase, central domain Thimo_2178 IPR022630 S-adenosylmethionine synthetase, C-terminal Thimo_2178 IPR022631 S-adenosylmethionine synthetase, conserved site Thimo_2178 IPR022636 S-adenosylmethionine synthetase superfamily Thimo_2179 IPR000043 Adenosylhomocysteinase Thimo_2179 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Thimo_2179 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site Thimo_2179 IPR034373 Thimo_2179 Thimo_2179 IPR036291 Thimo_2179 Thimo_2180 IPR003171 Methylenetetrahydrofolate reductase Thimo_2180 IPR004620 5,10-methylenetetrahydrofolate reductase Thimo_2180 IPR029041 FAD-linked oxidoreductase-like Thimo_2181 IPR006334 Glutamate--cysteine ligase, monofunctional Thimo_2181 IPR007370 Glutamate--cysteine ligase Thimo_2181 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thimo_2182 IPR001478 PDZ domain Thimo_2182 IPR004447 C-terminal-processing peptidase S41A Thimo_2182 IPR005151 Tail specific protease Thimo_2182 IPR020992 Tail specific protease, C-terminal Thimo_2182 IPR029045 ClpP/crotonase-like domain Thimo_2182 IPR036034 Thimo_2182 Thimo_2183 IPR023635 Peptide deformylase Thimo_2183 IPR036821 Thimo_2183 Thimo_2185 IPR003730 Multi-copper polyphenol oxidoreductase, laccase Thimo_2185 IPR011324 Cytotoxic necrotizing factor-like, catalytic Thimo_2185 IPR038371 Thimo_2185 Thimo_2186 IPR002942 RNA-binding S4 domain Thimo_2186 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Thimo_2186 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site Thimo_2186 IPR006225 Pseudouridine synthase, RluC/RluD Thimo_2186 IPR020103 Pseudouridine synthase, catalytic domain Thimo_2186 IPR036986 Thimo_2186 Thimo_2187 IPR011990 Tetratricopeptide-like helical domain Thimo_2187 IPR017689 Outer membrane protein assembly factor BamD Thimo_2187 IPR039565 Thimo_2187 Thimo_2188 IPR002187 Nitrogen regulatory protein PII Thimo_2188 IPR002332 Nitrogen regulatory protein P-II, urydylation site Thimo_2188 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_2188 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_2188 IPR017918 Nitrogen regulatory protein PII, conserved site Thimo_2189 IPR003010 Carbon-nitrogen hydrolase Thimo_2189 IPR003694 NAD(+) synthetase Thimo_2189 IPR014445 Glutamine-dependent NAD(+) synthetase Thimo_2189 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2189 IPR022310 NAD/GMP synthase Thimo_2189 IPR036526 Thimo_2189 Thimo_2190 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2190 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2190 IPR036097 Thimo_2190 Thimo_2190 IPR036890 Thimo_2190 Thimo_2191 IPR001789 Signal transduction response regulator, receiver domain Thimo_2191 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_2191 IPR002197 DNA binding HTH domain, Fis-type Thimo_2191 IPR003593 AAA+ ATPase domain Thimo_2191 IPR009057 Homeodomain-like Thimo_2191 IPR011006 CheY-like superfamily Thimo_2191 IPR025944 Sigma-54 interaction domain, conserved site Thimo_2191 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2192 IPR000182 GNAT domain Thimo_2192 IPR001048 Aspartate/glutamate/uridylate kinase Thimo_2192 IPR010167 Amino-acid N-acetyltransferase (ArgA) Thimo_2192 IPR016181 Acyl-CoA N-acyltransferase Thimo_2192 IPR036393 Thimo_2192 Thimo_2193 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thimo_2193 IPR035093 Thimo_2193 Thimo_2194 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_2194 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_2196 IPR000182 GNAT domain Thimo_2196 IPR016181 Acyl-CoA N-acyltransferase Thimo_2197 IPR001584 Integrase, catalytic core Thimo_2197 IPR009057 Homeodomain-like Thimo_2197 IPR012337 Ribonuclease H-like domain Thimo_2197 IPR036397 Thimo_2197 Thimo_2198 IPR002514 Transposase IS3/IS911family Thimo_2198 IPR009057 Homeodomain-like Thimo_2201 IPR009614 Toxin YoeB Thimo_2201 IPR035093 Thimo_2201 Thimo_2202 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_2202 IPR036165 Thimo_2202 Thimo_2203 IPR008949 Terpenoid synthase Thimo_2204 IPR001269 tRNA-dihydrouridine synthase Thimo_2204 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN Thimo_2204 IPR013785 Aldolase-type TIM barrel Thimo_2204 IPR018517 tRNA-dihydrouridine synthase, conserved site Thimo_2205 IPR000620 Drug/metabolite transporter Thimo_2207 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thimo_2207 IPR011611 Carbohydrate kinase PfkB Thimo_2207 IPR029056 Ribokinase-like Thimo_2208 IPR011435 Protein of unknown function DUF1538 Thimo_2209 IPR002187 Nitrogen regulatory protein PII Thimo_2209 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_2209 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_2210 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_2211 IPR006379 HAD-superfamily hydrolase, subfamily IIB Thimo_2211 IPR006380 Sucrose-phosphate synthase Thimo_2211 IPR023214 HAD-like domain Thimo_2211 IPR036412 Thimo_2211 Thimo_2212 IPR017853 Glycoside hydrolase, superfamily Thimo_2213 IPR002744 Domain of unknown function DUF59 Thimo_2213 IPR014291 SUF system FeS cluster assembly associated Thimo_2213 IPR034904 Thimo_2213 Thimo_2214 IPR000825 SUF system FeS cluster assembly, SufBD Thimo_2214 IPR011542 SUF system FeS cluster assembly, SufD Thimo_2214 IPR037284 Thimo_2214 Thimo_2215 IPR003439 ABC transporter-like Thimo_2215 IPR003593 AAA+ ATPase domain Thimo_2215 IPR010230 FeS cluster assembly SUF system, ATPase SufC Thimo_2215 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2216 IPR000825 SUF system FeS cluster assembly, SufBD Thimo_2216 IPR010231 SUF system FeS cluster assembly, SufB Thimo_2216 IPR037284 Thimo_2216 Thimo_2217 IPR021327 Protein of unknown function DUF2934 Thimo_2218 IPR000192 Aminotransferase class V domain Thimo_2218 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2218 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2218 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2218 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Thimo_2218 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase Thimo_2220 IPR003817 Phosphatidylserine decarboxylase-related Thimo_2220 IPR033177 Thimo_2220 Thimo_2220 IPR033178 Thimo_2220 Thimo_2221 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thimo_2221 IPR004525 Elongation factor P--(R)-beta-lysine ligase Thimo_2221 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal Thimo_2222 IPR001059 Translation elongation factor P/YeiP, central Thimo_2222 IPR008991 Translation protein SH3-like domain Thimo_2222 IPR011768 Translation elongation factor P Thimo_2222 IPR012340 Nucleic acid-binding, OB-fold Thimo_2222 IPR013185 Translation elongation factor, KOW-like Thimo_2222 IPR013852 Translation elongation factor P/YeiP, conserved site Thimo_2222 IPR014722 Ribosomal protein L2 domain 2 Thimo_2222 IPR015365 Elongation factor P, C-terminal Thimo_2222 IPR020599 Translation elongation factor P/YeiP Thimo_2223 IPR003739 Lysine-2,3-aminomutase family Thimo_2223 IPR007197 Radical SAM Thimo_2223 IPR013785 Aldolase-type TIM barrel Thimo_2223 IPR022462 Lysine-2,3-aminomutase-like Thimo_2224 IPR000160 GGDEF domain Thimo_2224 IPR001633 EAL domain Thimo_2224 IPR029787 Nucleotide cyclase Thimo_2224 IPR035919 Thimo_2224 Thimo_2224 IPR035965 Thimo_2224 Thimo_2225 IPR010394 5-nucleotidase Thimo_2227 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_2227 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2230 IPR001036 Acriflavin resistance protein Thimo_2230 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_2231 IPR006143 RND efflux pump, membrane fusion protein Thimo_2231 IPR032317 Thimo_2231 Thimo_2232 IPR022812 Dynamin superfamily Thimo_2232 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2233 IPR000086 NUDIX hydrolase domain Thimo_2233 IPR015797 NUDIX hydrolase domain-like Thimo_2233 IPR020084 NUDIX hydrolase, conserved site Thimo_2233 IPR020476 NUDIX hydrolase Thimo_2233 IPR036388 Thimo_2233 Thimo_2233 IPR036390 Thimo_2233 Thimo_2234 IPR003473 Quinolinate synthetase A Thimo_2234 IPR036094 Thimo_2234 Thimo_2235 IPR009056 Cytochrome c-like domain Thimo_2235 IPR024167 Cytochrome c4 Thimo_2235 IPR036909 Thimo_2235 Thimo_2236 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thimo_2236 IPR016156 FAD/NAD-linked reductase, dimerisation domain Thimo_2236 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_2236 IPR036188 Thimo_2236 Thimo_2236 IPR037092 Thimo_2236 Thimo_2237 IPR010266 NnrS Thimo_2238 IPR018692 Protein of unknown function DUF2189 Thimo_2240 IPR011635 APHP Thimo_2240 IPR013783 Immunoglobulin-like fold Thimo_2242 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2245 IPR001478 PDZ domain Thimo_2245 IPR005151 Tail specific protease Thimo_2245 IPR028204 Tricorn protease C1 domain Thimo_2245 IPR029045 ClpP/crotonase-like domain Thimo_2245 IPR036034 Thimo_2245 Thimo_2246 IPR002514 Transposase IS3/IS911family Thimo_2246 IPR009057 Homeodomain-like Thimo_2247 IPR001584 Integrase, catalytic core Thimo_2247 IPR009057 Homeodomain-like Thimo_2247 IPR012337 Ribonuclease H-like domain Thimo_2247 IPR036397 Thimo_2247 Thimo_2248 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Thimo_2248 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Thimo_2252 IPR001584 Integrase, catalytic core Thimo_2252 IPR012337 Ribonuclease H-like domain Thimo_2252 IPR025948 HTH-like domain Thimo_2252 IPR036397 Thimo_2252 Thimo_2253 IPR002514 Transposase IS3/IS911family Thimo_2253 IPR009057 Homeodomain-like Thimo_2253 IPR036388 Thimo_2253 Thimo_2255 IPR001270 ClpA/B family Thimo_2255 IPR003593 AAA+ ATPase domain Thimo_2255 IPR003959 ATPase, AAA-type, core Thimo_2255 IPR004176 Clp, N-terminal Thimo_2255 IPR017730 Chaperonin ClpB Thimo_2255 IPR018368 ClpA/B, conserved site 1 Thimo_2255 IPR019489 Clp ATPase, C-terminal Thimo_2255 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2255 IPR028299 ClpA/B, conserved site 2 Thimo_2255 IPR036628 Thimo_2255 Thimo_2256 IPR025714 Methyltransferase domain Thimo_2256 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2257 IPR011528 Nuclease-related domain, NERD Thimo_2258 IPR035959 Thimo_2258 Thimo_2259 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Thimo_2259 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_2260 IPR006656 Molybdopterin oxidoreductase Thimo_2260 IPR006657 Molydopterin dinucleotide-binding domain Thimo_2260 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain Thimo_2260 IPR009010 Aspartate decarboxylase-like domain Thimo_2262 IPR002699 ATPase, V1 complex, subunit D Thimo_2263 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_2263 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Thimo_2263 IPR022879 V-type ATP synthase regulatory subunit B/beta Thimo_2263 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2264 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain Thimo_2264 IPR003593 AAA+ ATPase domain Thimo_2264 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain Thimo_2264 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site Thimo_2264 IPR022878 V-type ATP synthase catalytic alpha chain Thimo_2264 IPR023366 ATP synthase subunit alpha-like domain Thimo_2264 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal Thimo_2264 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2264 IPR031686 Thimo_2264 Thimo_2264 IPR036121 Thimo_2264 Thimo_2266 IPR008218 ATPase, V1 complex, subunit F Thimo_2266 IPR036906 Thimo_2266 Thimo_2267 IPR000245 V-ATPase proteolipid subunit Thimo_2267 IPR002379 V-ATPase proteolipid subunit C-like domain Thimo_2267 IPR035921 Thimo_2267 Thimo_2277 IPR000209 Peptidase S8/S53 domain Thimo_2277 IPR013783 Immunoglobulin-like fold Thimo_2277 IPR015500 Peptidase S8, subtilisin-related Thimo_2277 IPR022398 Peptidase S8, subtilisin, His-active site Thimo_2277 IPR023827 Peptidase S8, subtilisin, Asp-active site Thimo_2277 IPR023828 Peptidase S8, subtilisin, Ser-active site Thimo_2277 IPR036116 Thimo_2277 Thimo_2277 IPR036852 Thimo_2277 Thimo_2281 IPR002195 Dihydroorotase, conserved site Thimo_2281 IPR004721 Dihydroorotase homodimeric type Thimo_2281 IPR006680 Amidohydrolase 1 Thimo_2281 IPR032466 Thimo_2281 Thimo_2282 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising Thimo_2282 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal Thimo_2282 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal Thimo_2282 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site Thimo_2283 IPR010233 Ubiquinone biosynthesis O-methyltransferase Thimo_2283 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2284 IPR008949 Terpenoid synthase Thimo_2285 IPR002347 Glucose/ribitol dehydrogenase Thimo_2285 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_2285 IPR036291 Thimo_2285 Thimo_2286 IPR005805 Rieske iron-sulphur protein, C-terminal Thimo_2286 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit Thimo_2286 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thimo_2286 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal Thimo_2286 IPR036922 Thimo_2286 Thimo_2287 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2287 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain Thimo_2287 IPR022380 Glutamyl-Q tRNA(Asp) synthetase Thimo_2288 IPR000962 Zinc finger, DksA/TraR C4-type Thimo_2288 IPR012784 RNA polymerase-binding transcription factor DksA Thimo_2288 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Thimo_2288 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Thimo_2288 IPR037187 Thimo_2288 Thimo_2289 IPR003141 Polymerase/histidinol phosphatase, N-terminal Thimo_2289 IPR004013 PHP, C-terminal Thimo_2289 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thimo_2289 IPR004805 DNA polymerase III, alpha subunit Thimo_2289 IPR011708 Bacterial DNA polymerase III, alpha subunit Thimo_2289 IPR016195 Polymerase/histidinol phosphatase-like Thimo_2289 IPR029460 DNA polymerase, helix-hairpin-helix motif Thimo_2292 IPR003607 HD/PDEase domain Thimo_2292 IPR006674 HD domain Thimo_2292 IPR006675 Uncharacterised domain HDIG Thimo_2294 IPR001082 Fimbrial protein pilin Thimo_2294 IPR012902 Prokaryotic N-terminal methylation site Thimo_2297 IPR000644 CBS domain Thimo_2299 IPR002347 Glucose/ribitol dehydrogenase Thimo_2299 IPR011283 Acetoacetyl-CoA reductase Thimo_2299 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_2299 IPR036291 Thimo_2299 Thimo_2300 IPR005569 Arc-like DNA binding Thimo_2300 IPR010985 Ribbon-helix-helix Thimo_2300 IPR013321 Arc-type ribbon-helix-helix Thimo_2301 IPR002716 PIN domain Thimo_2301 IPR029060 PIN domain-like Thimo_2302 IPR008228 Uncharacterised conserved protein UCP006173 Thimo_2303 IPR036390 Thimo_2303 Thimo_2305 IPR000719 Protein kinase domain Thimo_2305 IPR011009 Protein kinase-like domain Thimo_2310 IPR007685 RelA/SpoT Thimo_2313 IPR001584 Integrase, catalytic core Thimo_2313 IPR009057 Homeodomain-like Thimo_2313 IPR012337 Ribonuclease H-like domain Thimo_2313 IPR036397 Thimo_2313 Thimo_2314 IPR002514 Transposase IS3/IS911family Thimo_2314 IPR009057 Homeodomain-like Thimo_2315 IPR006344 Exodeoxyribonuclease V, alpha subunit Thimo_2315 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2315 IPR027785 UvrD-like helicase C-terminal domain Thimo_2316 IPR004586 Exodeoxyribonuclease V, beta subunit Thimo_2316 IPR011335 Restriction endonuclease type II-like Thimo_2316 IPR011604 Exonuclease, phage-type/RecB, C-terminal Thimo_2316 IPR014017 DNA helicase, UvrD-like, C-terminal Thimo_2316 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2316 IPR034739 Thimo_2316 Thimo_2316 IPR038726 Thimo_2316 Thimo_2317 IPR006697 Exodeoxyribonuclease V, gamma subunit Thimo_2317 IPR011335 Restriction endonuclease type II-like Thimo_2317 IPR013986 DExx box DNA helicase domain Thimo_2317 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2318 IPR003251 Rubrerythrin Thimo_2318 IPR009078 Ferritin-like superfamily Thimo_2318 IPR012347 Ferritin-related Thimo_2319 IPR007459 DNA polymerase III chi subunit, HolC Thimo_2319 IPR036768 Thimo_2319 Thimo_2320 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal Thimo_2320 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal Thimo_2320 IPR011356 Leucine aminopeptidase/peptidase B Thimo_2320 IPR023042 Peptidase M17, leucine aminopeptidase Thimo_2321 IPR005495 Permease YjgP/YjgQ, predicted Thimo_2321 IPR030923 Thimo_2321 Thimo_2322 IPR010432 RDD Thimo_2323 IPR000014 PAS domain Thimo_2323 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2323 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2323 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2323 IPR035965 Thimo_2323 Thimo_2323 IPR036097 Thimo_2323 Thimo_2323 IPR036890 Thimo_2323 Thimo_2324 IPR000792 Transcription regulator LuxR, C-terminal Thimo_2324 IPR001789 Signal transduction response regulator, receiver domain Thimo_2324 IPR011006 CheY-like superfamily Thimo_2324 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2324 IPR036388 Thimo_2324 Thimo_2325 IPR007829 TM2 domain Thimo_2326 IPR000182 GNAT domain Thimo_2326 IPR007807 Helicase domain Thimo_2326 IPR013562 Domain of unknown function DUF1726 Thimo_2326 IPR016181 Acyl-CoA N-acyltransferase Thimo_2326 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA Thimo_2326 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2328 IPR006214 Bax inhibitor 1-related Thimo_2330 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Thimo_2330 IPR002317 Serine-tRNA ligase, type1 Thimo_2330 IPR010978 tRNA-binding arm Thimo_2330 IPR015866 Serine-tRNA synthetase, type1, N-terminal Thimo_2331 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thimo_2331 IPR004441 RNA methyltransferase TrmH family Thimo_2331 IPR013123 RNA 2-O ribose methyltransferase, substrate binding Thimo_2331 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Thimo_2331 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_2331 IPR029028 Alpha/beta knot methyltransferases Thimo_2331 IPR029064 50S ribosomal protein L30e-like Thimo_2332 IPR001900 Thimo_2332 Thimo_2332 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_2332 IPR004476 Ribonuclease II/ribonuclease R Thimo_2332 IPR011129 Cold shock protein Thimo_2332 IPR011805 Ribonuclease R Thimo_2332 IPR012340 Nucleic acid-binding, OB-fold Thimo_2332 IPR013223 Ribonuclease B, N-terminal OB domain Thimo_2332 IPR022966 Ribonuclease II/R, conserved site Thimo_2332 IPR022967 RNA-binding domain, S1 Thimo_2334 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2334 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thimo_2334 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing Thimo_2334 IPR029016 GAF domain-like Thimo_2334 IPR036890 Thimo_2334 Thimo_2335 IPR000792 Transcription regulator LuxR, C-terminal Thimo_2335 IPR001789 Signal transduction response regulator, receiver domain Thimo_2335 IPR011006 CheY-like superfamily Thimo_2335 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2336 IPR001763 Rhodanese-like domain Thimo_2336 IPR036873 Thimo_2336 Thimo_2338 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain Thimo_2339 IPR006355 HAD-superfamily hydrolase, subfamily IIA, hypothetical 2 Thimo_2339 IPR006357 HAD-superfamily hydrolase, subfamily IIA Thimo_2339 IPR023214 HAD-like domain Thimo_2339 IPR036412 Thimo_2339 Thimo_2340 IPR007296 Domain of unknown function DUF403 Thimo_2340 IPR025841 Circularly permuted ATP-grasp type 2 Thimo_2341 IPR002931 Transglutaminase-like Thimo_2341 IPR013589 Bacterial transglutaminase-like, N-terminal Thimo_2341 IPR038765 Thimo_2341 Thimo_2342 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_2342 IPR025526 DsrC-like domain Thimo_2343 IPR004193 Glycoside hydrolase, family 13, N-terminal Thimo_2343 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_2343 IPR012768 Malto-oligosyltrehalose trehalohydrolase Thimo_2343 IPR013783 Immunoglobulin-like fold Thimo_2343 IPR014756 Immunoglobulin E-set Thimo_2343 IPR017853 Glycoside hydrolase, superfamily Thimo_2343 IPR022567 Domain of unknown function DUF3459 Thimo_2344 IPR005746 Thioredoxin Thimo_2344 IPR013766 Thioredoxin domain Thimo_2344 IPR017937 Thioredoxin, conserved site Thimo_2344 IPR036249 Thimo_2344 Thimo_2345 IPR005746 Thioredoxin Thimo_2345 IPR011990 Tetratricopeptide-like helical domain Thimo_2345 IPR013766 Thioredoxin domain Thimo_2345 IPR017937 Thioredoxin, conserved site Thimo_2345 IPR036249 Thimo_2345 Thimo_2346 IPR003793 Domain of unknown function DUF190 Thimo_2346 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_2346 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_2347 IPR003691 Putative fluoride ion transporter CrcB Thimo_2348 IPR000352 Peptide chain release factor class I/class II Thimo_2349 IPR000462 CDP-alcohol phosphatidyltransferase Thimo_2349 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase Thimo_2350 IPR002023 NADH-quinone oxidoreductase subunit E-like Thimo_2350 IPR036249 Thimo_2350 Thimo_2351 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site Thimo_2351 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit Thimo_2351 IPR019554 Soluble ligand binding domain Thimo_2351 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding Thimo_2351 IPR036249 Thimo_2351 Thimo_2351 IPR037207 Thimo_2351 Thimo_2351 IPR037225 Thimo_2351 Thimo_2352 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site Thimo_2352 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit Thimo_2352 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_2352 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_2352 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding Thimo_2352 IPR036010 Thimo_2352 Thimo_2353 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_2353 IPR037024 Thimo_2353 Thimo_2354 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_2354 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thimo_2354 IPR029014 NiFe hydrogenase-like Thimo_2355 IPR000671 Peptidase A31 family Thimo_2355 IPR023430 Peptidase HybD-like domain Thimo_2358 IPR003738 Protein of unknown function DUF159 Thimo_2358 IPR036590 Thimo_2358 Thimo_2360 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2360 IPR003660 HAMP linker domain Thimo_2360 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2360 IPR036097 Thimo_2360 Thimo_2360 IPR036890 Thimo_2360 Thimo_2361 IPR001789 Signal transduction response regulator, receiver domain Thimo_2361 IPR001867 Signal transduction response regulator, C-terminal Thimo_2361 IPR011006 CheY-like superfamily Thimo_2361 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2361 IPR036388 Thimo_2361 Thimo_2362 IPR025517 Domain of unknown function DUF4405 Thimo_2363 IPR001126 DNA-repair protein, UmuC-like Thimo_2363 IPR017961 DNA polymerase, Y-family, little finger domain Thimo_2363 IPR022880 DNA polymerase IV Thimo_2363 IPR036775 Thimo_2363 Thimo_2365 IPR001650 Helicase, C-terminal Thimo_2365 IPR003711 CarD-like/TRCF domain Thimo_2365 IPR004576 Transcription-repair coupling factor Thimo_2365 IPR005118 Transcription-repair-coupling factor, C-terminal domain Thimo_2365 IPR011545 DEAD/DEAH box helicase domain Thimo_2365 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2365 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2365 IPR036101 Thimo_2365 Thimo_2365 IPR037235 Thimo_2365 Thimo_2366 IPR000868 Isochorismatase-like Thimo_2366 IPR036380 Thimo_2366 Thimo_2367 IPR001763 Rhodanese-like domain Thimo_2367 IPR036873 Thimo_2367 Thimo_2368 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2369 IPR002156 Ribonuclease H domain Thimo_2369 IPR012337 Ribonuclease H-like domain Thimo_2369 IPR022892 Ribonuclease H Thimo_2369 IPR036397 Thimo_2369 Thimo_2370 IPR013216 Methyltransferase type 11 Thimo_2370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2371 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase Thimo_2371 IPR004404 Dihydroxy-acid dehydratase Thimo_2371 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site Thimo_2371 IPR037237 Thimo_2371 Thimo_2372 IPR001130 TatD family Thimo_2372 IPR015991 Uncharacterised deoxyribonuclease TatD-type Thimo_2372 IPR018228 Deoxyribonuclease, TatD-related, conserved site Thimo_2372 IPR032466 Thimo_2372 Thimo_2373 IPR009875 PilZ domain Thimo_2374 IPR004622 DNA polymerase III, delta prime subunit Thimo_2374 IPR015199 DNA polymerase III, delta subunit, C-terminal Thimo_2374 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2375 IPR018094 Thymidylate kinase Thimo_2375 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2375 IPR039430 Thimo_2375 Thimo_2376 IPR003770 Uncharacterised protein family UPF0755, YceG-like Thimo_2377 IPR001544 Aminotransferase, class IV Thimo_2377 IPR017824 Aminodeoxychorismate lyase, class IV Thimo_2377 IPR036038 Thimo_2377 Thimo_2378 IPR014030 Beta-ketoacyl synthase, N-terminal Thimo_2378 IPR014031 Beta-ketoacyl synthase, C-terminal Thimo_2378 IPR016039 Thiolase-like Thimo_2378 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 Thimo_2378 IPR018201 Beta-ketoacyl synthase, active site Thimo_2378 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Thimo_2379 IPR003231 Acyl carrier protein (ACP) Thimo_2379 IPR006162 Phosphopantetheine attachment site Thimo_2379 IPR009081 Acyl carrier protein-like Thimo_2379 IPR020806 Polyketide synthase, phosphopantetheine-binding domain Thimo_2379 IPR036736 Thimo_2379 Thimo_2380 IPR002347 Glucose/ribitol dehydrogenase Thimo_2380 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase Thimo_2380 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_2380 IPR036291 Thimo_2380 Thimo_2381 IPR001227 Acyl transferase domain Thimo_2381 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type Thimo_2381 IPR014043 Acyl transferase Thimo_2381 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_2381 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Thimo_2381 IPR020801 Polyketide synthase, acyl transferase domain Thimo_2381 IPR024925 Malonyl CoA-acyl carrier protein transacylase Thimo_2382 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 Thimo_2382 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal Thimo_2382 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thimo_2382 IPR016039 Thiolase-like Thimo_2383 IPR003664 Fatty acid synthesis PlsX protein Thimo_2383 IPR012281 Phospholipid biosynthesis protein, PlsX-like Thimo_2384 IPR002677 Ribosomal protein L32p Thimo_2384 IPR011332 Zinc-binding ribosomal protein Thimo_2385 IPR003772 Protein of unknown function DUF177 Thimo_2386 IPR001114 Adenylosuccinate synthetase Thimo_2386 IPR018220 Adenylosuccinate synthase, active site Thimo_2386 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2386 IPR033128 Thimo_2386 Thimo_2387 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit Thimo_2387 IPR004517 ATP phosphoribosyltransferase regulatory subunit Thimo_2388 IPR019201 Protein of unknown function DUF2065 Thimo_2389 IPR001107 Band 7 protein Thimo_2389 IPR001972 Stomatin family Thimo_2389 IPR010200 HflC Thimo_2389 IPR036013 Thimo_2389 Thimo_2390 IPR001107 Band 7 protein Thimo_2390 IPR010201 HflK Thimo_2390 IPR020980 Menbrane protein HflK, N-terminal Thimo_2390 IPR036013 Thimo_2390 Thimo_2391 IPR006073 GTP binding domain Thimo_2391 IPR016496 GTPase HflX Thimo_2391 IPR025121 GTPase HflX N-terminal domain Thimo_2391 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2391 IPR032305 Thimo_2391 Thimo_2392 IPR005001 Host factor Hfq Thimo_2392 IPR010920 Like-Sm (LSM) domain Thimo_2393 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase Thimo_2393 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2394 IPR002099 DNA mismatch repair protein family Thimo_2394 IPR013507 DNA mismatch repair protein, C-terminal Thimo_2394 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_2394 IPR014762 DNA mismatch repair, conserved site Thimo_2394 IPR014790 MutL, C-terminal, dimerisation Thimo_2394 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_2394 IPR020667 DNA mismatch repair protein, MutL Thimo_2394 IPR036890 Thimo_2394 Thimo_2394 IPR037198 Thimo_2394 Thimo_2395 IPR017853 Glycoside hydrolase, superfamily Thimo_2397 IPR001650 Helicase, C-terminal Thimo_2397 IPR005259 Primosomal protein n Thimo_2397 IPR011545 DEAD/DEAH box helicase domain Thimo_2397 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2397 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2398 IPR003615 HNH nuclease Thimo_2398 IPR029471 HNH endonuclease 5 Thimo_2399 IPR011009 Protein kinase-like domain Thimo_2399 IPR016477 Fructosamine/Ketosamine-3-kinase Thimo_2400 IPR013078 Histidine phosphatase superfamily, clade-1 Thimo_2400 IPR029033 Histidine phosphatase superfamily Thimo_2401 IPR003646 SH3-like domain, bacterial-type Thimo_2401 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_2401 IPR036259 Thimo_2401 Thimo_2401 IPR036737 Thimo_2401 Thimo_2402 IPR007208 Na(+)/H(+) antiporter subunit F-like Thimo_2403 IPR005133 Na+/H+ antiporter subunit G Thimo_2404 IPR025383 Domain of unknown function DUF4040 Thimo_2405 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Thimo_2406 IPR039428 Thimo_2406 Thimo_2407 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_2408 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_2408 IPR003918 NADH:ubiquinone oxidoreductase Thimo_2409 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thimo_2410 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_2410 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit Thimo_2411 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thimo_2411 IPR037232 Thimo_2411 Thimo_2412 IPR001135 NADH-quinone oxidoreductase, subunit D Thimo_2412 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site Thimo_2412 IPR029014 NiFe hydrogenase-like Thimo_2412 IPR038290 Thimo_2412 Thimo_2413 IPR009051 Alpha-helical ferredoxin Thimo_2413 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_2414 IPR002758 Na+/H+ antiporter subunit E Thimo_2415 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Thimo_2416 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2416 IPR038734 Thimo_2416 Thimo_2417 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Thimo_2417 IPR014576 Predicted phosphoesterase, YhaO type Thimo_2417 IPR029052 Metallo-dependent phosphatase-like Thimo_2418 IPR010721 Protein of unknown function DUF1295 Thimo_2419 IPR021306 Protein of unknown function DUF2878 Thimo_2421 IPR002509 Polysaccharide deacetylase Thimo_2421 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_2422 IPR000182 GNAT domain Thimo_2422 IPR016181 Acyl-CoA N-acyltransferase Thimo_2424 IPR000192 Aminotransferase class V domain Thimo_2424 IPR003808 Fe-S metabolism associated domain, SufE-like Thimo_2424 IPR010970 Cysteine desulfurase, SufS Thimo_2424 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2424 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2424 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2426 IPR003751 Carbon storage regulator Thimo_2426 IPR036107 Thimo_2426 Thimo_2427 IPR001048 Aspartate/glutamate/uridylate kinase Thimo_2427 IPR001341 Aspartate kinase domain Thimo_2427 IPR002912 ACT domain Thimo_2427 IPR005260 Aspartate kinase, monofunctional class Thimo_2427 IPR018042 Aspartate kinase, conserved site Thimo_2427 IPR027795 GATS-like ACT domain Thimo_2427 IPR036393 Thimo_2427 Thimo_2428 IPR002318 Alanine-tRNA ligase, class IIc Thimo_2428 IPR003156 DHHA1 domain Thimo_2428 IPR009000 Translation protein, beta-barrel domain Thimo_2428 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Thimo_2428 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain Thimo_2428 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain Thimo_2428 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal Thimo_2428 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria Thimo_2429 IPR003783 Regulatory protein RecX Thimo_2429 IPR036388 Thimo_2429 Thimo_2430 IPR003593 AAA+ ATPase domain Thimo_2430 IPR013765 DNA recombination and repair protein RecA Thimo_2430 IPR020584 DNA recombination/repair protein RecA, conserved site Thimo_2430 IPR023400 DNA recombination and repair protein RecA, C-terminal Thimo_2430 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2431 IPR004175 2',5' RNA ligase Thimo_2431 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase Thimo_2432 IPR008136 CinA, C-terminal Thimo_2432 IPR036653 Thimo_2432 Thimo_2433 IPR008579 Domain of unknown function DUF861, cupin-3 Thimo_2433 IPR011051 RmlC-like cupin domain Thimo_2433 IPR014710 RmlC-like jelly roll fold Thimo_2434 IPR001041 2Fe-2S ferredoxin-type domain Thimo_2434 IPR001221 Phenol hydroxylase reductase Thimo_2434 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thimo_2434 IPR012675 Beta-grasp domain Thimo_2434 IPR017938 Riboflavin synthase-like beta-barrel Thimo_2434 IPR036010 Thimo_2434 Thimo_2434 IPR039261 Thimo_2434 Thimo_2435 IPR002925 Dienelactone hydrolase Thimo_2435 IPR029058 Alpha/Beta hydrolase fold Thimo_2436 IPR002081 Cryptochrome/DNA photolyase, class 1 Thimo_2436 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal Thimo_2436 IPR006050 DNA photolyase, N-terminal Thimo_2436 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2436 IPR036134 Thimo_2436 Thimo_2436 IPR036155 Thimo_2436 Thimo_2437 IPR023368 Uncharacterised protein family UPF0066, conserved site Thimo_2437 IPR023370 TsaA-like domain Thimo_2437 IPR036413 Thimo_2437 Thimo_2437 IPR036414 Thimo_2437 Thimo_2438 IPR000671 Peptidase A31 family Thimo_2438 IPR023430 Peptidase HybD-like domain Thimo_2442 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Thimo_2442 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain Thimo_2442 IPR036754 Thimo_2442 Thimo_2443 IPR005325 Protein of unknown function DUF308, membrane Thimo_2444 IPR003593 AAA+ ATPase domain Thimo_2444 IPR003959 ATPase, AAA-type, core Thimo_2444 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal Thimo_2444 IPR021886 MgsA AAA+ ATPase C-terminal Thimo_2444 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2444 IPR032423 Thimo_2444 Thimo_2445 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Thimo_2445 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria Thimo_2445 IPR029046 Lipoprotein localisation LolA/LolB/LppX Thimo_2446 IPR002543 FtsK domain Thimo_2446 IPR003593 AAA+ ATPase domain Thimo_2446 IPR018541 FtsK gamma domain Thimo_2446 IPR025199 Domain of unknown function DUF4117 Thimo_2446 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2446 IPR036388 Thimo_2446 Thimo_2446 IPR036390 Thimo_2446 Thimo_2447 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II Thimo_2447 IPR005982 Thioredoxin reductase Thimo_2447 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site Thimo_2447 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain Thimo_2447 IPR036188 Thimo_2447 Thimo_2448 IPR007434 Protein of unknown function DUF482 Thimo_2448 IPR016181 Acyl-CoA N-acyltransferase Thimo_2449 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase Thimo_2449 IPR016181 Acyl-CoA N-acyltransferase Thimo_2450 IPR007471 Arginine-tRNA-protein transferase, N-terminal Thimo_2450 IPR007472 Arginine-tRNA-protein transferase, C-terminal Thimo_2450 IPR016181 Acyl-CoA N-acyltransferase Thimo_2450 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic Thimo_2451 IPR001640 Prolipoprotein diacylglyceryl transferase Thimo_2452 IPR010073 Phosphoribosylformylglycinamidine synthase Thimo_2452 IPR010918 AIR synthase-related protein, C-terminal domain Thimo_2452 IPR029062 Class I glutamine amidotransferase-like Thimo_2452 IPR036604 Thimo_2452 Thimo_2452 IPR036676 Thimo_2452 Thimo_2452 IPR036921 Thimo_2452 Thimo_2454 IPR004864 Late embryogenesis abundant protein, LEA-14 Thimo_2454 IPR013990 Water stress and hypersensitive response domain Thimo_2457 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site Thimo_2457 IPR007627 RNA polymerase sigma-70 region 2 Thimo_2457 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 Thimo_2457 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_2457 IPR013325 RNA polymerase sigma factor, region 2 Thimo_2457 IPR014284 RNA polymerase sigma-70 like domain Thimo_2457 IPR036388 Thimo_2457 Thimo_2458 IPR027383 Putative zinc-finger Thimo_2459 IPR002575 Aminoglycoside phosphotransferase Thimo_2459 IPR011009 Protein kinase-like domain Thimo_2459 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2460 IPR021309 Protein of unknown function DUF2892 Thimo_2461 IPR005839 Methylthiotransferase Thimo_2461 IPR005840 Ribosomal protein S12 methylthiotransferase RimO Thimo_2461 IPR006638 Elongator protein 3/MiaB/NifB Thimo_2461 IPR007197 Radical SAM Thimo_2461 IPR013848 Methylthiotransferase, N-terminal Thimo_2461 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_2461 IPR038135 Thimo_2461 Thimo_2462 IPR000014 PAS domain Thimo_2462 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thimo_2462 IPR000780 MCP methyltransferase, CheR-type Thimo_2462 IPR013767 PAS fold Thimo_2462 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Thimo_2462 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thimo_2462 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2462 IPR035909 Thimo_2462 Thimo_2462 IPR035965 Thimo_2462 Thimo_2464 IPR000014 PAS domain Thimo_2464 IPR013656 PAS fold-4 Thimo_2464 IPR035965 Thimo_2464 Thimo_2465 IPR000014 PAS domain Thimo_2465 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_2465 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_2465 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_2465 IPR013656 PAS fold-4 Thimo_2465 IPR013767 PAS fold Thimo_2465 IPR029016 GAF domain-like Thimo_2465 IPR035965 Thimo_2465 Thimo_2465 IPR036097 Thimo_2465 Thimo_2465 IPR036890 Thimo_2465 Thimo_2466 IPR000792 Transcription regulator LuxR, C-terminal Thimo_2466 IPR001789 Signal transduction response regulator, receiver domain Thimo_2466 IPR011006 CheY-like superfamily Thimo_2466 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2466 IPR036388 Thimo_2466 Thimo_2467 IPR006685 Mechanosensitive ion channel MscS Thimo_2467 IPR007055 BON domain Thimo_2467 IPR010920 Like-Sm (LSM) domain Thimo_2467 IPR011066 Mechanosensitive ion channel MscS, C-terminal Thimo_2467 IPR023408 Thimo_2467 Thimo_2468 IPR000595 Cyclic nucleotide-binding domain Thimo_2468 IPR012318 Helix-turn-helix motif, Crp-type Thimo_2468 IPR014710 RmlC-like jelly roll fold Thimo_2468 IPR018490 Cyclic nucleotide-binding-like Thimo_2468 IPR036388 Thimo_2468 Thimo_2468 IPR036390 Thimo_2468 Thimo_2469 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 Thimo_2469 IPR005804 Fatty acid desaturase, type 1 Thimo_2470 IPR018723 Protein of unknown function DUF2254, membrane Thimo_2472 IPR007461 Ysc84 actin-binding domain Thimo_2473 IPR002549 Uncharacterised protein family UPF0118 Thimo_2476 IPR021309 Protein of unknown function DUF2892 Thimo_2477 IPR012556 Entericidin EcnAB Thimo_2481 IPR016936 Uncharacterised conserved protein UCP029693 Thimo_2482 IPR007055 BON domain Thimo_2482 IPR014004 Transport-associated and nodulation domain, bacteria Thimo_2483 IPR021738 Protein of unknown function DUF3309 Thimo_2485 IPR008462 CsbD-like Thimo_2485 IPR026042 Stress response protein YjbJ Thimo_2485 IPR036629 Thimo_2485 Thimo_2488 IPR005194 Glycoside hydrolase, family 65, C-terminal Thimo_2488 IPR008928 Six-hairpin glycosidase-like Thimo_2488 IPR009342 Putative carbohydrate binding domain Thimo_2488 IPR010383 Glycosyltransferase 36 Thimo_2488 IPR011013 Galactose mutarotase-like domain Thimo_2488 IPR012341 Six-hairpin glycosidase Thimo_2488 IPR019282 Domain of unknown function DUF2329 Thimo_2488 IPR033432 Thimo_2488 Thimo_2488 IPR037018 Thimo_2488 Thimo_2489 IPR000014 PAS domain Thimo_2489 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thimo_2489 IPR000780 MCP methyltransferase, CheR-type Thimo_2489 IPR013656 PAS fold-4 Thimo_2489 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Thimo_2489 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thimo_2489 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2489 IPR035909 Thimo_2489 Thimo_2489 IPR035965 Thimo_2489 Thimo_2490 IPR000014 PAS domain Thimo_2490 IPR000160 GGDEF domain Thimo_2490 IPR001610 PAC motif Thimo_2490 IPR001633 EAL domain Thimo_2490 IPR013655 PAS fold-3 Thimo_2490 IPR013767 PAS fold Thimo_2490 IPR029787 Nucleotide cyclase Thimo_2490 IPR035919 Thimo_2490 Thimo_2490 IPR035965 Thimo_2490 Thimo_2491 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Thimo_2492 IPR006076 FAD dependent oxidoreductase Thimo_2492 IPR012727 Glycine oxidase ThiO Thimo_2492 IPR036188 Thimo_2492 Thimo_2495 IPR021727 Protein of unknown function DUF3299 Thimo_2496 IPR003538 Gram-negative bacterial TonB protein Thimo_2496 IPR006260 TonB, C-terminal Thimo_2496 IPR037682 Thimo_2496 Thimo_2497 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_2498 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_2499 IPR002898 MotA/TolQ/ExbB proton channel Thimo_2500 IPR000531 TonB-dependent receptor, beta-barrel Thimo_2500 IPR012910 TonB-dependent receptor, plug Thimo_2500 IPR036942 Thimo_2500 Thimo_2500 IPR037066 Thimo_2500 Thimo_2501 IPR003495 CobW/HypB/UreG domain Thimo_2501 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Thimo_2501 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2501 IPR036627 Thimo_2501 Thimo_2506 IPR003838 Permease FtsX-like Thimo_2506 IPR025857 MacB-like periplasmic core domain Thimo_2507 IPR003439 ABC transporter-like Thimo_2507 IPR003593 AAA+ ATPase domain Thimo_2507 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2508 IPR021253 Protein of unknown function DUF2796 Thimo_2509 IPR002481 Ferric-uptake regulator Thimo_2509 IPR036388 Thimo_2509 Thimo_2509 IPR036390 Thimo_2509 Thimo_2510 IPR001626 ABC-3 Thimo_2510 IPR037294 Thimo_2510 Thimo_2511 IPR003439 ABC transporter-like Thimo_2511 IPR003593 AAA+ ATPase domain Thimo_2511 IPR017871 ABC transporter, conserved site Thimo_2511 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2512 IPR006127 Periplasmic solute binding protein family Thimo_2512 IPR006128 Adhesion lipoprotein Thimo_2513 IPR000962 Zinc finger, DksA/TraR C4-type Thimo_2513 IPR012784 RNA polymerase-binding transcription factor DksA Thimo_2513 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Thimo_2513 IPR037187 Thimo_2513 Thimo_2515 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Thimo_2516 IPR014955 Protein of unknown function DUF1826 Thimo_2517 IPR014955 Protein of unknown function DUF1826 Thimo_2518 IPR033399 Thimo_2518 Thimo_2519 IPR003838 Permease FtsX-like Thimo_2520 IPR003838 Permease FtsX-like Thimo_2520 IPR025857 MacB-like periplasmic core domain Thimo_2521 IPR003439 ABC transporter-like Thimo_2521 IPR003593 AAA+ ATPase domain Thimo_2521 IPR017871 ABC transporter, conserved site Thimo_2521 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2523 IPR025424 YrhK domain Thimo_2525 IPR026022 PhoU domain Thimo_2525 IPR028366 Phosphate transport system protein PhoU Thimo_2525 IPR038078 Thimo_2525 Thimo_2526 IPR003439 ABC transporter-like Thimo_2526 IPR003593 AAA+ ATPase domain Thimo_2526 IPR005670 Phosphate transport system permease protein 1 Thimo_2526 IPR017871 ABC transporter, conserved site Thimo_2526 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2527 IPR000515 MetI-like domain Thimo_2527 IPR005672 Phosphate transport system permease protein PstA Thimo_2527 IPR024573 Domain of unknown function DUF3333 Thimo_2527 IPR035906 Thimo_2527 Thimo_2528 IPR000515 MetI-like domain Thimo_2528 IPR011864 Phosphate ABC transporter, permease protein PstC Thimo_2528 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain Thimo_2528 IPR035906 Thimo_2528 Thimo_2529 IPR024370 PBP domain Thimo_2530 IPR000644 CBS domain Thimo_2530 IPR006667 SLC41 divalent cation transporters, integral membrane domain Thimo_2530 IPR006668 Magnesium transporter, MgtE intracellular domain Thimo_2530 IPR006669 Magnesium transporter MgtE Thimo_2530 IPR036739 Thimo_2530 Thimo_2530 IPR038048 Thimo_2530 Thimo_2530 IPR038076 Thimo_2530 Thimo_2531 IPR004681 TRAP transporter permease protein Thimo_2531 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Thimo_2532 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component Thimo_2533 IPR004682 TRAP dicarboxylate transporter Thimo_2533 IPR018389 Bacterial extracellular solute-binding protein, family 7 Thimo_2533 IPR038404 Thimo_2533 Thimo_2534 IPR000846 Dihydrodipicolinate reductase, N-terminal Thimo_2534 IPR022663 Dihydrodipicolinate reductase, C-terminal Thimo_2534 IPR022664 Dihydrodipicolinate reductase, conserved site Thimo_2534 IPR023940 Dihydrodipicolinate reductase, bacterial Thimo_2534 IPR036291 Thimo_2534 Thimo_2535 IPR001305 Heat shock protein DnaJ, cysteine-rich domain Thimo_2535 IPR001623 DnaJ domain Thimo_2535 IPR002939 Chaperone DnaJ, C-terminal Thimo_2535 IPR008971 HSP40/DnaJ peptide-binding Thimo_2535 IPR012724 Chaperone DnaJ Thimo_2535 IPR018253 DnaJ domain, conserved site Thimo_2535 IPR036410 Thimo_2535 Thimo_2535 IPR036869 Thimo_2535 Thimo_2536 IPR012725 Chaperone DnaK Thimo_2536 IPR013126 Heat shock protein 70 family Thimo_2536 IPR018181 Heat shock protein 70, conserved site Thimo_2536 IPR029047 Heat shock protein 70kD, peptide-binding domain Thimo_2536 IPR029048 Heat shock protein 70kD, C-terminal domain Thimo_2537 IPR000740 GrpE nucleotide exchange factor Thimo_2537 IPR009012 GrpE nucleotide exchange factor, head Thimo_2537 IPR013805 GrpE nucleotide exchange factor, coiled-coil Thimo_2538 IPR002571 Heat-inducible transcription repressor HrcA Thimo_2538 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain Thimo_2538 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal Thimo_2538 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain Thimo_2538 IPR029016 GAF domain-like Thimo_2538 IPR036388 Thimo_2538 Thimo_2538 IPR036390 Thimo_2538 Thimo_2539 IPR002504 Inorganic polyphosphate/ATP-NAD kinase Thimo_2539 IPR016064 ATP-NAD kinase-like domain Thimo_2539 IPR017437 ATP-NAD kinase, PpnK-type, all-beta Thimo_2539 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 Thimo_2540 IPR003395 RecF/RecN/SMC, N-terminal Thimo_2540 IPR004604 DNA recombination/repair protein RecN Thimo_2540 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2541 IPR002481 Ferric-uptake regulator Thimo_2541 IPR036388 Thimo_2541 Thimo_2541 IPR036390 Thimo_2541 Thimo_2542 IPR007450 Lipoprotein SmpA/OmlA Thimo_2542 IPR026592 Outer membrane protein assembly factor BamE Thimo_2542 IPR037873 Thimo_2542 Thimo_2543 IPR005346 RnfH protein Thimo_2543 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Thimo_2543 IPR037021 Thimo_2543 Thimo_2544 IPR005031 Streptomyces cyclase/dehydrase Thimo_2544 IPR023393 START-like domain Thimo_2545 IPR000175 Sodium:neurotransmitter symporter Thimo_2545 IPR037272 Thimo_2545 Thimo_2546 IPR005841 Alpha-D-phosphohexomutase superfamily Thimo_2546 IPR005843 Alpha-D-phosphohexomutase, C-terminal Thimo_2546 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thimo_2546 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thimo_2546 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thimo_2546 IPR006352 Phosphoglucosamine mutase Thimo_2546 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thimo_2546 IPR016066 Alpha-D-phosphohexomutase, conserved site Thimo_2546 IPR036900 Thimo_2546 Thimo_2547 IPR000489 Pterin-binding Thimo_2547 IPR006390 Dihydropteroate synthase Thimo_2547 IPR011005 Dihydropteroate synthase-like Thimo_2548 IPR000642 Peptidase M41 Thimo_2548 IPR003593 AAA+ ATPase domain Thimo_2548 IPR003959 ATPase, AAA-type, core Thimo_2548 IPR003960 ATPase, AAA-type, conserved site Thimo_2548 IPR005936 Peptidase, FtsH Thimo_2548 IPR011546 Peptidase M41, FtsH extracellular Thimo_2548 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2548 IPR037219 Thimo_2548 Thimo_2549 IPR002877 Ribosomal RNA methyltransferase FtsJ domain Thimo_2549 IPR015507 Ribosomal RNA large subunit methyltransferase E Thimo_2549 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2550 IPR004215 Prokaryotic glutathione synthetase, N-terminal Thimo_2550 IPR004218 Prokaryotic glutathione synthetase, ATP-binding Thimo_2550 IPR006284 Glutathione synthetase, prokaryotic Thimo_2550 IPR013815 ATP-grasp fold, subdomain 1 Thimo_2550 IPR016185 Pre-ATP-grasp domain Thimo_2551 IPR003374 ApbE-like domain Thimo_2551 IPR024932 Flavin transferase ApbE Thimo_2552 IPR006260 TonB, C-terminal Thimo_2552 IPR037682 Thimo_2552 Thimo_2553 IPR003774 Protein of unknown function UPF0301 Thimo_2554 IPR005227 Resolvase, holliday junction-type, YqgF-like Thimo_2554 IPR006641 YqgF/RNase H-like domain Thimo_2554 IPR012337 Ribonuclease H-like domain Thimo_2554 IPR037027 Thimo_2554 Thimo_2555 IPR000836 Phosphoribosyltransferase domain Thimo_2555 IPR029057 Phosphoribosyltransferase-like Thimo_2556 IPR002082 Aspartate carbamoyltransferase Thimo_2556 IPR006130 Aspartate/ornithine carbamoyltransferase Thimo_2556 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Thimo_2556 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Thimo_2556 IPR036901 Thimo_2556 Thimo_2557 IPR006680 Amidohydrolase 1 Thimo_2557 IPR011059 Metal-dependent hydrolase, composite domain Thimo_2557 IPR032466 Thimo_2557 Thimo_2558 IPR008333 Oxidoreductase, FAD-binding domain Thimo_2558 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit Thimo_2558 IPR017938 Riboflavin synthase-like beta-barrel Thimo_2558 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Thimo_2558 IPR037117 Thimo_2558 Thimo_2558 IPR039261 Thimo_2558 Thimo_2559 IPR001623 DnaJ domain Thimo_2559 IPR036869 Thimo_2559 Thimo_2560 IPR036465 Thimo_2560 Thimo_2562 IPR022742 Putative lysophospholipase Thimo_2562 IPR029058 Alpha/Beta hydrolase fold Thimo_2563 IPR000183 Ornithine/DAP/Arg decarboxylase Thimo_2563 IPR002985 Arginine decarboxylase Thimo_2563 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thimo_2563 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Thimo_2563 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thimo_2563 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Thimo_2563 IPR029066 PLP-binding barrel Thimo_2564 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF Thimo_2564 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site Thimo_2565 IPR003495 CobW/HypB/UreG domain Thimo_2565 IPR004392 Hydrogenase accessory protein HypB Thimo_2565 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase Thimo_2565 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2567 IPR005325 Protein of unknown function DUF308, membrane Thimo_2569 IPR002634 BolA protein Thimo_2569 IPR036065 Thimo_2569 Thimo_2570 IPR002104 Integrase, catalytic Thimo_2570 IPR004107 Integrase, SAM-like, N-terminal Thimo_2570 IPR010998 Integrase, Lambda-type, N-terminal Thimo_2570 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_2570 IPR011946 Integrase, integron-type Thimo_2570 IPR013762 Integrase-like, catalytic core Thimo_2572 IPR005182 Domain of unknown function DUF304 Thimo_2574 IPR002686 Transposase IS200-like Thimo_2574 IPR036515 Thimo_2574 Thimo_2576 IPR031807 Thimo_2576 Thimo_2576 IPR035069 Thimo_2576 Thimo_2577 IPR012933 HicA mRNA interferase family Thimo_2577 IPR038570 Thimo_2577 Thimo_2579 IPR000795 Elongation factor, GTP-binding domain Thimo_2579 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Thimo_2579 IPR004548 Peptide chain release factor 3 Thimo_2579 IPR005225 Small GTP-binding protein domain Thimo_2579 IPR009000 Translation protein, beta-barrel domain Thimo_2579 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2579 IPR031157 Thimo_2579 Thimo_2579 IPR032090 Thimo_2579 Thimo_2579 IPR035647 Thimo_2579 Thimo_2579 IPR038467 Thimo_2579 Thimo_2580 IPR000101 Gamma-glutamyltranspeptidase Thimo_2580 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_2582 IPR003439 ABC transporter-like Thimo_2582 IPR003593 AAA+ ATPase domain Thimo_2582 IPR017871 ABC transporter, conserved site Thimo_2582 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2582 IPR032524 Thimo_2582 Thimo_2582 IPR032781 Thimo_2582 Thimo_2582 IPR037118 Thimo_2582 Thimo_2583 IPR006685 Mechanosensitive ion channel MscS Thimo_2583 IPR010920 Like-Sm (LSM) domain Thimo_2583 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 Thimo_2583 IPR011066 Mechanosensitive ion channel MscS, C-terminal Thimo_2583 IPR023408 Thimo_2583 Thimo_2584 IPR003439 ABC transporter-like Thimo_2584 IPR004602 UvrABC system subunit A Thimo_2584 IPR017871 ABC transporter, conserved site Thimo_2584 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2585 IPR004113 FAD-linked oxidase, C-terminal Thimo_2585 IPR006094 FAD linked oxidase, N-terminal Thimo_2585 IPR016164 FAD-linked oxidase-like, C-terminal Thimo_2585 IPR016167 FAD-binding, type 2, subdomain 1 Thimo_2585 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_2585 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain Thimo_2585 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Thimo_2585 IPR036318 Thimo_2585 Thimo_2587 IPR009056 Cytochrome c-like domain Thimo_2587 IPR036909 Thimo_2587 Thimo_2588 IPR009056 Cytochrome c-like domain Thimo_2588 IPR036909 Thimo_2588 Thimo_2589 IPR015590 Aldehyde dehydrogenase domain Thimo_2589 IPR016161 Aldehyde/histidinol dehydrogenase Thimo_2589 IPR016162 Aldehyde dehydrogenase, N-terminal Thimo_2589 IPR016163 Aldehyde dehydrogenase, C-terminal Thimo_2589 IPR029510 Aldehyde dehydrogenase, glutamic acid active site Thimo_2590 IPR025737 MetA-pathway of phenol degradation, putative Thimo_2591 IPR009057 Homeodomain-like Thimo_2591 IPR018060 DNA binding HTH domain, AraC-type Thimo_2591 IPR020449 Transcription regulator HTH, AraC- type Thimo_2591 IPR035418 Thimo_2591 Thimo_2592 IPR001098 DNA-directed DNA polymerase, family A, palm domain Thimo_2592 IPR002298 DNA polymerase A Thimo_2592 IPR002421 5'-3' exonuclease, N-terminal Thimo_2592 IPR002562 3'-5' exonuclease domain Thimo_2592 IPR008918 Helix-hairpin-helix motif, class 2 Thimo_2592 IPR012337 Ribonuclease H-like domain Thimo_2592 IPR018320 DNA polymerase 1 Thimo_2592 IPR019760 DNA-directed DNA polymerase, family A, conserved site Thimo_2592 IPR020045 5'-3' exonuclease, C-terminal domain Thimo_2592 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal Thimo_2592 IPR029060 PIN domain-like Thimo_2592 IPR036279 Thimo_2592 Thimo_2592 IPR036397 Thimo_2592 Thimo_2593 IPR000792 Transcription regulator LuxR, C-terminal Thimo_2593 IPR001789 Signal transduction response regulator, receiver domain Thimo_2593 IPR011006 CheY-like superfamily Thimo_2593 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2595 IPR000014 PAS domain Thimo_2595 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain Thimo_2595 IPR013655 PAS fold-3 Thimo_2595 IPR013656 PAS fold-4 Thimo_2595 IPR035965 Thimo_2595 Thimo_2595 IPR036890 Thimo_2595 Thimo_2596 IPR001087 Lipase, GDSL Thimo_2597 IPR002559 Transposase, IS4-like Thimo_2597 IPR032806 Thimo_2597 Thimo_2598 IPR003742 SPOUT methyltransferase, predicted Thimo_2598 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_2598 IPR029028 Alpha/beta knot methyltransferases Thimo_2599 IPR003697 Maf-like protein Thimo_2599 IPR029001 Inosine triphosphate pyrophosphatase-like Thimo_2600 IPR003029 Ribosomal protein S1, RNA-binding domain Thimo_2600 IPR004659 Ribonuclease E/G Thimo_2600 IPR012340 Nucleic acid-binding, OB-fold Thimo_2600 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G Thimo_2600 IPR022967 RNA-binding domain, S1 Thimo_2601 IPR011836 Conserved hypothetical protein CHP02099 Thimo_2601 IPR025263 Domain of unknown function DUF3971 Thimo_2601 IPR032712 Thimo_2601 Thimo_2603 IPR001110 Uncharacterised protein family UPF0012, conserved site Thimo_2603 IPR003010 Carbon-nitrogen hydrolase Thimo_2603 IPR036526 Thimo_2603 Thimo_2604 IPR002510 TldD/PmbA Thimo_2604 IPR025502 TldD Thimo_2604 IPR035068 Thimo_2604 Thimo_2604 IPR036059 Thimo_2604 Thimo_2605 IPR002510 TldD/PmbA Thimo_2605 IPR035068 Thimo_2605 Thimo_2605 IPR036059 Thimo_2605 Thimo_2606 IPR011322 Nitrogen regulatory PII-like, alpha/beta Thimo_2606 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Thimo_2607 IPR003251 Rubrerythrin Thimo_2607 IPR009078 Ferritin-like superfamily Thimo_2607 IPR012347 Ferritin-related Thimo_2608 IPR002589 Macro domain Thimo_2609 IPR002321 Cytochrome c, class II Thimo_2609 IPR010980 Cytochrome c/b562 Thimo_2609 IPR012127 Cytochrome c prime Thimo_2609 IPR015984 Cytochrome c prime, subgroup Thimo_2610 IPR000595 Cyclic nucleotide-binding domain Thimo_2610 IPR012318 Helix-turn-helix motif, Crp-type Thimo_2610 IPR014710 RmlC-like jelly roll fold Thimo_2610 IPR018490 Cyclic nucleotide-binding-like Thimo_2610 IPR036388 Thimo_2610 Thimo_2610 IPR036390 Thimo_2610 Thimo_2611 IPR004695 Voltage-dependent anion channel Thimo_2611 IPR038665 Thimo_2611 Thimo_2613 IPR002139 Ribokinase Thimo_2613 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site Thimo_2613 IPR011611 Carbohydrate kinase PfkB Thimo_2613 IPR029056 Ribokinase-like Thimo_2616 IPR000462 CDP-alcohol phosphatidyltransferase Thimo_2616 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Thimo_2617 IPR000305 GIY-YIG nuclease superfamily Thimo_2617 IPR001162 UvrC family homology region Thimo_2617 IPR001943 UVR domain Thimo_2617 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thimo_2617 IPR004791 UvrABC system, subunit C Thimo_2617 IPR010994 RuvA domain 2-like Thimo_2617 IPR035901 Thimo_2617 Thimo_2617 IPR036876 Thimo_2617 Thimo_2617 IPR038476 Thimo_2617 Thimo_2618 IPR000792 Transcription regulator LuxR, C-terminal Thimo_2618 IPR001789 Signal transduction response regulator, receiver domain Thimo_2618 IPR011006 CheY-like superfamily Thimo_2618 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_2622 IPR009057 Homeodomain-like Thimo_2622 IPR012337 Ribonuclease H-like domain Thimo_2622 IPR025959 Winged helix-turn helix domain Thimo_2622 IPR038717 Thimo_2622 Thimo_2623 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_2623 IPR011990 Tetratricopeptide-like helical domain Thimo_2623 IPR035897 Thimo_2623 Thimo_2624 IPR011990 Tetratricopeptide-like helical domain Thimo_2629 IPR011962 Deoxycytidine triphosphate deaminase Thimo_2629 IPR029054 dUTPase-like Thimo_2629 IPR036157 Thimo_2629 Thimo_2630 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase Thimo_2630 IPR020548 Fructose-1,6-bisphosphatase, active site Thimo_2630 IPR028343 Fructose-1,6-bisphosphatase Thimo_2630 IPR033391 Thimo_2630 Thimo_2633 IPR002549 Uncharacterised protein family UPF0118 Thimo_2635 IPR000847 Transcription regulator HTH, LysR Thimo_2635 IPR005119 LysR, substrate-binding Thimo_2635 IPR036388 Thimo_2635 Thimo_2635 IPR036390 Thimo_2635 Thimo_2636 IPR005017 Membrane protein, aromatic hydrocarbon degradation Thimo_2637 IPR027396 DsrEFH-like Thimo_2637 IPR032836 Thimo_2637 Thimo_2638 IPR001455 TusA-like domain Thimo_2638 IPR036868 Thimo_2638 Thimo_2639 IPR001763 Rhodanese-like domain Thimo_2639 IPR036873 Thimo_2639 Thimo_2640 IPR000878 Tetrapyrrole methylase Thimo_2640 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Thimo_2640 IPR006366 Uroporphyrin-III C-methyltransferase Thimo_2640 IPR006367 Sirohaem synthase, N-terminal Thimo_2640 IPR012409 Sirohaem synthase Thimo_2640 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_2640 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_2640 IPR019478 Sirohaem synthase, dimerisation domain Thimo_2640 IPR035996 Thimo_2640 Thimo_2640 IPR036291 Thimo_2640 Thimo_2640 IPR037115 Thimo_2640 Thimo_2641 IPR003824 Undecaprenyl-diphosphatase UppP Thimo_2642 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Thimo_2642 IPR006234 O-succinylhomoserine sulfhydrylase Thimo_2642 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2642 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2642 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2643 IPR000836 Phosphoribosyltransferase domain Thimo_2643 IPR005854 Amidophosphoribosyl transferase Thimo_2643 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_2643 IPR029057 Phosphoribosyltransferase-like Thimo_2644 IPR003825 Colicin V production, CvpA Thimo_2645 IPR007730 Sporulation-related domain Thimo_2645 IPR036680 Thimo_2645 Thimo_2646 IPR001645 Folylpolyglutamate synthetase Thimo_2646 IPR013221 Mur ligase, central Thimo_2646 IPR036565 Thimo_2646 Thimo_2646 IPR036615 Thimo_2646 Thimo_2647 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit Thimo_2647 IPR029045 ClpP/crotonase-like domain Thimo_2647 IPR034733 Thimo_2647 Thimo_2648 IPR002028 Tryptophan synthase, alpha chain Thimo_2648 IPR011060 Ribulose-phosphate binding barrel Thimo_2648 IPR013785 Aldolase-type TIM barrel Thimo_2648 IPR018204 Tryptophan synthase, alpha chain, active site Thimo_2649 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_2649 IPR006653 Tryptophan synthase, beta chain, conserved site Thimo_2649 IPR006654 Tryptophan synthase, beta chain Thimo_2649 IPR023026 Tryptophan synthase beta chain/beta chain-like Thimo_2649 IPR036052 Thimo_2649 Thimo_2650 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain Thimo_2650 IPR011060 Ribulose-phosphate binding barrel Thimo_2650 IPR013785 Aldolase-type TIM barrel Thimo_2651 IPR001406 Pseudouridine synthase I, TruA Thimo_2651 IPR020095 Pseudouridine synthase I, TruA, C-terminal Thimo_2651 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain Thimo_2651 IPR020103 Pseudouridine synthase, catalytic domain Thimo_2652 IPR011990 Tetratricopeptide-like helical domain Thimo_2652 IPR020011 Motility protein FimV, C-terminal Thimo_2652 IPR038440 Thimo_2652 Thimo_2653 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site Thimo_2653 IPR000534 Semialdehyde dehydrogenase, NAD-binding Thimo_2653 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type Thimo_2653 IPR012080 Aspartate-semialdehyde dehydrogenase Thimo_2653 IPR012280 Semialdehyde dehydrogenase, dimerisation domain Thimo_2653 IPR036291 Thimo_2653 Thimo_2654 IPR004429 Isopropylmalate dehydrogenase Thimo_2654 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site Thimo_2654 IPR024084 Isopropylmalate dehydrogenase-like domain Thimo_2655 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel Thimo_2655 IPR004431 3-isopropylmalate dehydratase, small subunit Thimo_2655 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel Thimo_2656 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha Thimo_2656 IPR004430 3-isopropylmalate dehydratase, large subunit Thimo_2656 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 Thimo_2656 IPR018136 Aconitase family, 4Fe-4S cluster binding site Thimo_2656 IPR036008 Thimo_2656 Thimo_2657 IPR002583 Ribosomal protein S20 Thimo_2657 IPR036510 Thimo_2657 Thimo_2659 IPR002686 Transposase IS200-like Thimo_2659 IPR036515 Thimo_2659 Thimo_2661 IPR008979 Galactose-binding domain-like Thimo_2661 IPR011990 Tetratricopeptide-like helical domain Thimo_2663 IPR001623 DnaJ domain Thimo_2663 IPR032710 Thimo_2663 Thimo_2663 IPR036869 Thimo_2663 Thimo_2665 IPR003856 Lipopolysaccharide biosynthesis Thimo_2665 IPR005702 Exopolysaccharide synthesis protein Thimo_2665 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2665 IPR032807 Thimo_2665 Thimo_2665 IPR033756 Thimo_2665 Thimo_2676 IPR000715 Glycosyl transferase, family 4 Thimo_2677 IPR005656 MmgE/PrpD Thimo_2677 IPR012705 2-methylcitrate dehydratase PrpD Thimo_2677 IPR036148 Thimo_2677 Thimo_2678 IPR002020 Citrate synthase-like Thimo_2678 IPR011278 2-methylcitrate synthase/citrate synthase type I Thimo_2678 IPR016142 Citrate synthase-like, large alpha subdomain Thimo_2678 IPR016143 Citrate synthase-like, small alpha subdomain Thimo_2678 IPR019810 Citrate synthase active site Thimo_2678 IPR024176 Citrate synthase, bacterial-type Thimo_2678 IPR036969 Thimo_2678 Thimo_2679 IPR012695 Methylisocitrate lyase Thimo_2679 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_2679 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site Thimo_2680 IPR000524 Transcription regulator HTH, GntR Thimo_2680 IPR008920 Transcription regulator FadR/GntR, C-terminal Thimo_2680 IPR011711 GntR, C-terminal Thimo_2680 IPR036388 Thimo_2680 Thimo_2680 IPR036390 Thimo_2680 Thimo_2681 IPR000873 AMP-dependent synthetase/ligase Thimo_2681 IPR020845 AMP-binding, conserved site Thimo_2681 IPR025110 AMP-binding enzyme C-terminal domain Thimo_2681 IPR032387 Thimo_2681 Thimo_2682 IPR038763 Thimo_2682 Thimo_2686 IPR024534 Domain of unknown function DUF2220 Thimo_2686 IPR036078 Thimo_2686 Thimo_2687 IPR007406 MukB, N-terminal domain Thimo_2687 IPR032520 Thimo_2687 Thimo_2688 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE Thimo_2689 IPR033439 Thimo_2689 Thimo_2689 IPR033440 Thimo_2689 Thimo_2689 IPR036141 Thimo_2689 Thimo_2689 IPR036390 Thimo_2689 Thimo_2690 IPR014942 Protein of unknown function DUF1814 Thimo_2691 IPR025159 Domain of unknown function DUF4095 Thimo_2693 IPR000160 GGDEF domain Thimo_2693 IPR029151 Periplasmic sensor domain-like Thimo_2693 IPR029787 Nucleotide cyclase Thimo_2693 IPR033479 Thimo_2693 Thimo_2694 IPR005502 ADP-ribosylation/Crystallin J1 Thimo_2694 IPR036705 Thimo_2694 Thimo_2695 IPR000189 Prokaryotic transglycosylase, active site Thimo_2695 IPR008258 Lytic transglycosylase-like SLT domain Thimo_2695 IPR008939 Lytic transglycosylase, superhelical U-shaped Thimo_2695 IPR012289 Lytic transglycosylase, superhelical linker Thimo_2695 IPR023346 Lysozyme-like domain Thimo_2695 IPR037061 Thimo_2695 Thimo_2697 IPR002881 Domain of unknown function DUF58 Thimo_2698 IPR002931 Transglutaminase-like Thimo_2698 IPR021878 Protein of unknown function DUF3488 Thimo_2698 IPR025403 Domain of unknown function DUF4129 Thimo_2698 IPR038765 Thimo_2698 Thimo_2699 IPR002797 Polysaccharide biosynthesis protein Thimo_2699 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Thimo_2700 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_2700 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_2700 IPR017853 Glycoside hydrolase, superfamily Thimo_2701 IPR002711 HNH endonuclease Thimo_2701 IPR003615 HNH nuclease Thimo_2702 IPR004852 Di-haem cytochrome c peroxidase Thimo_2702 IPR009056 Cytochrome c-like domain Thimo_2702 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase Thimo_2702 IPR036909 Thimo_2702 Thimo_2704 IPR000312 Glycosyl transferase, family 3 Thimo_2704 IPR017459 Glycosyl transferase family 3, N-terminal domain Thimo_2704 IPR035902 Thimo_2704 Thimo_2704 IPR036320 Thimo_2704 Thimo_2705 IPR017941 Rieske [2Fe-2S] iron-sulphur domain Thimo_2705 IPR036922 Thimo_2705 Thimo_2706 IPR004813 Oligopeptide transporter, OPT superfamily Thimo_2708 IPR012312 Haemerythrin/HHE cation-binding motif Thimo_2708 IPR012827 Haemerythrin-like, metal-binding domain Thimo_2708 IPR016131 Haemerythrin, iron-binding site Thimo_2708 IPR035938 Thimo_2708 Thimo_2709 IPR012338 Beta-lactamase/transpeptidase-like Thimo_2710 IPR000192 Aminotransferase class V domain Thimo_2710 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2710 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2710 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2710 IPR016454 Cysteine desulfurase, NifS Thimo_2710 IPR017644 Cysteine desulfurase, DndA Thimo_2710 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Thimo_2711 IPR017601 DGQHR-containing domain Thimo_2711 IPR017642 DNA sulphur modification protein DndB Thimo_2712 IPR002500 Phosphoadenosine phosphosulphate reductase Thimo_2712 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2712 IPR017598 Sulphur transferase DndC, putative Thimo_2713 IPR017599 DNA sulphur modification protein DndD Thimo_2713 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2713 IPR038729 Thimo_2713 Thimo_2714 IPR014969 DNA sulphur modification protein DndE Thimo_2714 IPR038472 Thimo_2714 Thimo_2715 IPR011396 Uncharacterised conserved protein UCP030850 Thimo_2716 IPR023983 DNA sulphur modification system-associated protein 4 Thimo_2717 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2717 IPR038729 Thimo_2717 Thimo_2719 IPR017642 DNA sulphur modification protein DndB Thimo_2721 IPR001650 Helicase, C-terminal Thimo_2721 IPR006935 Helicase/UvrB domain Thimo_2721 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_2721 IPR025202 Phospholipase D-like domain Thimo_2721 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2722 IPR002716 PIN domain Thimo_2722 IPR002850 PIN family, putative toxin-antitoxin system toxin component Thimo_2722 IPR029060 PIN domain-like Thimo_2725 IPR002934 Nucleotidyl transferase domain Thimo_2726 IPR002716 PIN domain Thimo_2726 IPR029060 PIN domain-like Thimo_2727 IPR002145 Ribbon-helix-helix protein, copG Thimo_2727 IPR013321 Arc-type ribbon-helix-helix Thimo_2729 IPR003251 Rubrerythrin Thimo_2729 IPR009078 Ferritin-like superfamily Thimo_2729 IPR012347 Ferritin-related Thimo_2732 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Thimo_2732 IPR024019 Conserved hypothetical protein CHP04096 Thimo_2733 IPR018658 Protein of unknown function DUF2089 Thimo_2734 IPR007156 LemA Thimo_2734 IPR023353 LemA-like domain Thimo_2735 IPR001478 PDZ domain Thimo_2735 IPR007621 TPM domain Thimo_2735 IPR036034 Thimo_2735 Thimo_2736 IPR003593 AAA+ ATPase domain Thimo_2736 IPR004605 DNA helicase, Holliday junction RuvB type Thimo_2736 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal Thimo_2736 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal Thimo_2736 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2736 IPR036388 Thimo_2736 Thimo_2736 IPR036390 Thimo_2736 Thimo_2737 IPR006917 SOUL haem-binding protein Thimo_2737 IPR011256 Regulatory factor, effector binding domain Thimo_2738 IPR002657 Bile acid:sodium symporter Thimo_2738 IPR038770 Thimo_2738 Thimo_2739 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme Thimo_2739 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase Thimo_2739 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2739 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2739 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2740 IPR016040 NAD(P)-binding domain Thimo_2740 IPR036291 Thimo_2740 Thimo_2744 IPR011152 Phosphoesterase MJ0912 Thimo_2744 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Thimo_2744 IPR029052 Metallo-dependent phosphatase-like Thimo_2746 IPR030826 Thimo_2746 Thimo_2747 IPR004839 Aminotransferase, class I/classII Thimo_2747 IPR005861 Histidinol-phosphate aminotransferase family Thimo_2747 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2747 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2747 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2748 IPR001692 Histidinol dehydrogenase, conserved site Thimo_2748 IPR012131 Histidinol dehydrogenase Thimo_2748 IPR016161 Aldehyde/histidinol dehydrogenase Thimo_2748 IPR022695 Histidinol dehydrogenase, monofunctional Thimo_2749 IPR013820 ATP phosphoribosyltransferase, catalytic domain Thimo_2749 IPR018198 ATP phosphoribosyltransferase, conserved site Thimo_2749 IPR024893 ATP phosphoribosyltransferase HisG, short form Thimo_2750 IPR001986 Enolpyruvate transferase domain Thimo_2750 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase Thimo_2750 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Thimo_2750 IPR036968 Thimo_2750 Thimo_2751 IPR002645 STAS domain Thimo_2751 IPR036513 Thimo_2751 Thimo_2752 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Thimo_2753 IPR003399 Mammalian cell entry-related Thimo_2753 IPR030970 Thimo_2753 Thimo_2754 IPR003453 Permease domain Thimo_2754 IPR030802 Thimo_2754 Thimo_2755 IPR003439 ABC transporter-like Thimo_2755 IPR003593 AAA+ ATPase domain Thimo_2755 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2756 IPR000644 CBS domain Thimo_2756 IPR001347 Sugar isomerase (SIS) Thimo_2756 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type Thimo_2757 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Thimo_2757 IPR023214 HAD-like domain Thimo_2757 IPR036412 Thimo_2757 Thimo_2758 IPR010664 Lipopolysaccharide assembly, LptC-related Thimo_2758 IPR026265 Lipopolysaccharide export system protein LptC Thimo_2759 IPR005653 Organic solvent tolerance-like, N-terminal Thimo_2759 IPR014340 Lipopolysaccharide assembly, LptA Thimo_2760 IPR003439 ABC transporter-like Thimo_2760 IPR003593 AAA+ ATPase domain Thimo_2760 IPR017871 ABC transporter, conserved site Thimo_2760 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2760 IPR030921 Thimo_2760 Thimo_2760 IPR032823 Thimo_2760 Thimo_2761 IPR000394 RNA polymerase sigma factor 54 Thimo_2761 IPR007046 RNA polymerase sigma factor 54, core-binding Thimo_2761 IPR007634 RNA polymerase sigma factor 54, DNA-binding Thimo_2761 IPR038709 Thimo_2761 Thimo_2762 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein Thimo_2762 IPR036567 Thimo_2762 Thimo_2763 IPR002178 PTS EIIA type-2 domain Thimo_2763 IPR016152 Phosphotransferase/anion transporter Thimo_2765 IPR005337 ATPase, P-loop-containing Thimo_2765 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2766 IPR004701 Phosphotransferase system, mannose-type IIA component Thimo_2766 IPR036662 Thimo_2766 Thimo_2767 IPR000032 Phosphocarrier HPr protein-like Thimo_2767 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Thimo_2767 IPR002114 Phosphotransferase system, HPr serine phosphorylation site Thimo_2767 IPR035895 Thimo_2767 Thimo_2768 IPR000121 PEP-utilising enzyme, C-terminal Thimo_2768 IPR006318 Phosphoenolpyruvate-utilising enzyme Thimo_2768 IPR008279 PEP-utilising enzyme, mobile domain Thimo_2768 IPR008731 Phosphotransferase system, enzyme I N-terminal Thimo_2768 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_2768 IPR023151 PEP-utilising enzyme, conserved site Thimo_2768 IPR024692 Phosphotransferase system, enzyme I Thimo_2768 IPR036618 Thimo_2768 Thimo_2768 IPR036637 Thimo_2768 Thimo_2770 IPR000014 PAS domain Thimo_2770 IPR002197 DNA binding HTH domain, Fis-type Thimo_2770 IPR009057 Homeodomain-like Thimo_2770 IPR011785 Transcription regulator PpsR Thimo_2770 IPR035965 Thimo_2770 Thimo_2772 IPR003672 CobN/magnesium chelatase Thimo_2772 IPR011771 Magnesium-chelatase, subunit H Thimo_2772 IPR022571 Magnesium chelatase, subunit H, N-terminal Thimo_2774 IPR005652 Photosynthetic reaction centre, H subunit Thimo_2774 IPR011033 PRC-barrel-like Thimo_2774 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal Thimo_2774 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal Thimo_2774 IPR027275 PRC-barrel domain Thimo_2774 IPR037097 Thimo_2774 Thimo_2775 IPR003033 SCP2 sterol-binding domain Thimo_2775 IPR036527 Thimo_2775 Thimo_2776 IPR000544 Octanoyltransferase Thimo_2776 IPR004143 Biotin/lipoate A/B protein ligase Thimo_2777 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal Thimo_2777 IPR012338 Beta-lactamase/transpeptidase-like Thimo_2777 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal Thimo_2777 IPR015956 Penicillin-binding protein-associated Thimo_2777 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A Thimo_2777 IPR037167 Thimo_2777 Thimo_2778 IPR007730 Sporulation-related domain Thimo_2778 IPR009009 RlpA-like double-psi beta-barrel domain Thimo_2778 IPR012997 Rare lipoprotein A, bacterial Thimo_2778 IPR034718 Thimo_2778 Thimo_2778 IPR036680 Thimo_2778 Thimo_2778 IPR036908 Thimo_2778 Thimo_2779 IPR011757 Lytic transglycosylase MltB Thimo_2779 IPR023346 Lysozyme-like domain Thimo_2779 IPR031304 Thimo_2779 Thimo_2780 IPR001182 Cell cycle protein FtsW/RodA Thimo_2780 IPR011923 Rod shape-determining protein RodA Thimo_2780 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site Thimo_2781 IPR001460 Penicillin-binding protein, transpeptidase Thimo_2781 IPR005311 Penicillin-binding protein, dimerisation domain Thimo_2781 IPR012338 Beta-lactamase/transpeptidase-like Thimo_2781 IPR017790 Penicillin-binding protein 2 Thimo_2781 IPR036138 Thimo_2781 Thimo_2782 IPR007227 Cell shape-determining protein MreD Thimo_2782 IPR026034 Cell shape-determining protein MreD, proteobacterial type Thimo_2783 IPR007221 Rod shape-determining protein MreC Thimo_2784 IPR004753 Cell shape determining protein MreB/Mrl Thimo_2785 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit Thimo_2785 IPR036113 Thimo_2785 Thimo_2786 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit Thimo_2786 IPR020556 Amidase, conserved site Thimo_2786 IPR023631 Amidase signature domain Thimo_2786 IPR036928 Thimo_2786 Thimo_2787 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related Thimo_2787 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit Thimo_2787 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic Thimo_2787 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thimo_2787 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site Thimo_2787 IPR018027 Asn/Gln amidotransferase Thimo_2787 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Thimo_2790 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN Thimo_2790 IPR006638 Elongator protein 3/MiaB/NifB Thimo_2790 IPR007197 Radical SAM Thimo_2790 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_2791 IPR004096 4-vinyl reductase, 4VR Thimo_2791 IPR010249 Bacteriochlorophyll 4-vinyl reductase Thimo_2791 IPR024096 NO signalling/Golgi transport ligand-binding domain Thimo_2792 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p Thimo_2792 IPR023267 RNA (C5-cytosine) methyltransferase Thimo_2792 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2793 IPR003806 ATP-grasp fold, DUF201-type Thimo_2793 IPR013815 ATP-grasp fold, subdomain 1 Thimo_2793 IPR025839 RimK-like ATPgrasp N-terminal domain Thimo_2794 IPR000182 GNAT domain Thimo_2794 IPR016181 Acyl-CoA N-acyltransferase Thimo_2794 IPR021770 Protein of unknown function DUF3335 Thimo_2795 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site Thimo_2795 IPR002933 Peptidase M20 Thimo_2795 IPR010169 Acetylornithine deacetylase (ArgE) Thimo_2795 IPR011650 Peptidase M20, dimerisation domain Thimo_2795 IPR036264 Thimo_2795 Thimo_2796 IPR000640 Translation elongation factor EFG, V domain Thimo_2796 IPR000795 Elongation factor, GTP-binding domain Thimo_2796 IPR005225 Small GTP-binding protein domain Thimo_2796 IPR005517 Translation elongation factor EFG/EF2, domain IV Thimo_2796 IPR009000 Translation protein, beta-barrel domain Thimo_2796 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_2796 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_2796 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2796 IPR035647 Thimo_2796 Thimo_2798 IPR000835 MarR-type HTH domain Thimo_2798 IPR023187 Transcriptional regulator MarR-type, conserved site Thimo_2798 IPR036388 Thimo_2798 Thimo_2798 IPR036390 Thimo_2798 Thimo_2800 IPR002898 MotA/TolQ/ExbB proton channel Thimo_2801 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_2802 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_2803 IPR003538 Gram-negative bacterial TonB protein Thimo_2803 IPR006260 TonB, C-terminal Thimo_2803 IPR037682 Thimo_2803 Thimo_2804 IPR002491 ABC transporter periplasmic binding domain Thimo_2805 IPR000522 ABC transporter, permease protein Thimo_2805 IPR037294 Thimo_2805 Thimo_2806 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_2806 IPR025526 DsrC-like domain Thimo_2807 IPR003439 ABC transporter-like Thimo_2807 IPR003593 AAA+ ATPase domain Thimo_2807 IPR017871 ABC transporter, conserved site Thimo_2807 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2808 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thimo_2808 IPR036376 Thimo_2808 Thimo_2808 IPR036422 Thimo_2808 Thimo_2809 IPR009056 Cytochrome c-like domain Thimo_2809 IPR036909 Thimo_2809 Thimo_2810 IPR009056 Cytochrome c-like domain Thimo_2810 IPR024167 Cytochrome c4 Thimo_2810 IPR036909 Thimo_2810 Thimo_2811 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB Thimo_2812 IPR010177 Doubled CXXCH motif Thimo_2812 IPR020015 Decaheme cytochrome, c-type, DmsE Thimo_2812 IPR036280 Thimo_2812 Thimo_2813 IPR009057 Homeodomain-like Thimo_2813 IPR018060 DNA binding HTH domain, AraC-type Thimo_2813 IPR020449 Transcription regulator HTH, AraC- type Thimo_2813 IPR035418 Thimo_2813 Thimo_2814 IPR002145 Ribbon-helix-helix protein, copG Thimo_2814 IPR010985 Ribbon-helix-helix Thimo_2814 IPR013321 Arc-type ribbon-helix-helix Thimo_2814 IPR014864 Transcription factor, NikR, nickel binding C-terminal Thimo_2814 IPR022988 Nickel-responsive transcriptional regulator NikR Thimo_2814 IPR027271 Thimo_2814 Thimo_2815 IPR000014 PAS domain Thimo_2815 IPR000160 GGDEF domain Thimo_2815 IPR001610 PAC motif Thimo_2815 IPR001633 EAL domain Thimo_2815 IPR013655 PAS fold-3 Thimo_2815 IPR029787 Nucleotide cyclase Thimo_2815 IPR035919 Thimo_2815 Thimo_2815 IPR035965 Thimo_2815 Thimo_2816 IPR000014 PAS domain Thimo_2816 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase Thimo_2816 IPR000780 MCP methyltransferase, CheR-type Thimo_2816 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal Thimo_2816 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Thimo_2816 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2816 IPR035909 Thimo_2816 Thimo_2816 IPR035965 Thimo_2816 Thimo_2817 IPR000160 GGDEF domain Thimo_2817 IPR029787 Nucleotide cyclase Thimo_2818 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Thimo_2818 IPR006158 Cobalamin (vitamin B12)-binding domain Thimo_2818 IPR036594 Thimo_2818 Thimo_2818 IPR036724 Thimo_2818 Thimo_2819 IPR006664 Outer membrane protein, bacterial Thimo_2819 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_2819 IPR006690 Outer membrane protein, OmpA-like, conserved site Thimo_2819 IPR036737 Thimo_2819 Thimo_2819 IPR039567 Thimo_2819 Thimo_2820 IPR003439 ABC transporter-like Thimo_2820 IPR003593 AAA+ ATPase domain Thimo_2820 IPR011527 ABC transporter type 1, transmembrane domain Thimo_2820 IPR011918 ABC transporter, ATP-binding/permease protein Thimo_2820 IPR017871 ABC transporter, conserved site Thimo_2820 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2820 IPR036640 Thimo_2820 Thimo_2821 IPR000551 MerR-type HTH domain Thimo_2821 IPR009061 DNA binding domain, putative Thimo_2822 IPR000119 Histone-like bacterial DNA-binding protein Thimo_2822 IPR005684 Integration host factor, alpha subunit Thimo_2822 IPR010992 Integration host factor (IHF)-like DNA-binding domain Thimo_2822 IPR020816 Histone-like DNA-binding protein, conserved site Thimo_2823 IPR002547 tRNA-binding domain Thimo_2823 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit Thimo_2823 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding Thimo_2823 IPR005146 B3/B4 tRNA-binding domain Thimo_2823 IPR005147 tRNA synthetase, B5-domain Thimo_2823 IPR009061 DNA binding domain, putative Thimo_2823 IPR012340 Nucleic acid-binding, OB-fold Thimo_2823 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Thimo_2823 IPR036690 Thimo_2823 Thimo_2824 IPR002319 Phenylalanyl-tRNA synthetase Thimo_2824 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal Thimo_2824 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit Thimo_2824 IPR010978 tRNA-binding arm Thimo_2824 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial Thimo_2825 IPR005813 Ribosomal protein L20 Thimo_2825 IPR035566 Thimo_2825 Thimo_2826 IPR001706 Ribosomal protein L35, non-mitochondrial Thimo_2826 IPR018265 Ribosomal protein L35, conserved site Thimo_2826 IPR021137 Ribosomal protein L35 Thimo_2826 IPR037229 Thimo_2826 Thimo_2827 IPR001288 Translation initiation factor 3 Thimo_2827 IPR019813 Translation initiation factor 3, conserved site Thimo_2827 IPR019814 Translation initiation factor 3, N-terminal Thimo_2827 IPR019815 Translation initiation factor 3, C-terminal Thimo_2827 IPR036787 Thimo_2827 Thimo_2827 IPR036788 Thimo_2827 Thimo_2828 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain Thimo_2828 IPR002320 Threonine-tRNA ligase, class IIa Thimo_2828 IPR004095 TGS Thimo_2828 IPR004154 Anticodon-binding Thimo_2828 IPR012675 Beta-grasp domain Thimo_2828 IPR012676 TGS-like Thimo_2828 IPR012947 Threonyl/alanyl tRNA synthetase, SAD Thimo_2828 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain Thimo_2828 IPR036621 Thimo_2828 Thimo_2830 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain Thimo_2830 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain Thimo_2830 IPR011167 Iron-dependent fumarate hydratase Thimo_2830 IPR036660 Thimo_2830 Thimo_2831 IPR011032 GroES (chaperonin 10)-like Thimo_2831 IPR013149 Alcohol dehydrogenase, C-terminal Thimo_2831 IPR014188 Acrylyl-CoA reductase AcuI Thimo_2831 IPR020843 Polyketide synthase, enoylreductase Thimo_2831 IPR036291 Thimo_2831 Thimo_2832 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase Thimo_2832 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal Thimo_2832 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal Thimo_2833 IPR000456 Ribosomal protein L17 Thimo_2833 IPR036373 Thimo_2833 Thimo_2834 IPR011260 RNA polymerase, alpha subunit, C-terminal Thimo_2834 IPR011262 DNA-directed RNA polymerase, insert domain Thimo_2834 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type Thimo_2834 IPR011773 DNA-directed RNA polymerase, alpha subunit Thimo_2834 IPR036603 Thimo_2834 Thimo_2834 IPR036643 Thimo_2834 Thimo_2835 IPR001912 Ribosomal protein S4/S9, N-terminal Thimo_2835 IPR002942 RNA-binding S4 domain Thimo_2835 IPR005709 Ribosomal protein S4, bacterial-type Thimo_2835 IPR018079 Ribosomal protein S4, conserved site Thimo_2835 IPR036986 Thimo_2835 Thimo_2836 IPR001971 Ribosomal protein S11 Thimo_2836 IPR018102 Ribosomal S11, conserved site Thimo_2836 IPR019981 Ribosomal protein S11, bacterial-type Thimo_2836 IPR036967 Thimo_2836 Thimo_2837 IPR001892 Ribosomal protein S13 Thimo_2837 IPR010979 Ribosomal protein S13-like, H2TH Thimo_2837 IPR018269 Ribosomal protein S13, conserved site Thimo_2837 IPR019980 Ribosomal protein S13, bacterial-type Thimo_2837 IPR027437 30s ribosomal protein S13, C-terminal Thimo_2839 IPR000473 Ribosomal protein L36 Thimo_2839 IPR035977 Thimo_2839 Thimo_2840 IPR002208 SecY/SEC61-alpha family Thimo_2840 IPR023201 SecY subunit domain Thimo_2840 IPR026593 Protein translocase subunit SecY Thimo_2840 IPR030659 Thimo_2840 Thimo_2841 IPR001196 Ribosomal protein L15, conserved site Thimo_2841 IPR005749 Ribosomal protein L15, bacterial-type Thimo_2841 IPR021131 Ribosomal protein L18e/L15P Thimo_2841 IPR030878 Thimo_2841 Thimo_2841 IPR036227 Thimo_2841 Thimo_2842 IPR005996 Ribosomal protein L30, bacterial-type Thimo_2842 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Thimo_2842 IPR036919 Thimo_2842 Thimo_2843 IPR005324 Ribosomal protein S5, C-terminal Thimo_2843 IPR005712 Ribosomal protein S5, bacterial-type Thimo_2843 IPR013810 Ribosomal protein S5, N-terminal Thimo_2843 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_2843 IPR018192 Ribosomal protein S5, N-terminal, conserved site Thimo_2843 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_2844 IPR004389 Ribosomal protein L18, bacterial-type Thimo_2844 IPR005484 Ribosomal protein L18/L5 Thimo_2845 IPR000702 Ribosomal protein L6 Thimo_2845 IPR002358 Ribosomal protein L6, conserved site Thimo_2845 IPR019906 Ribosomal protein L6, bacterial-type Thimo_2845 IPR020040 Ribosomal protein L6, alpha-beta domain Thimo_2845 IPR036789 Thimo_2845 Thimo_2846 IPR000630 Ribosomal protein S8 Thimo_2846 IPR035987 Thimo_2846 Thimo_2847 IPR001209 Ribosomal protein S14 Thimo_2847 IPR023036 Ribosomal protein S14, bacterial/plastid Thimo_2848 IPR002132 Ribosomal protein L5 Thimo_2848 IPR020929 Ribosomal protein L5, conserved site Thimo_2848 IPR020930 Ribosomal protein L5, bacterial-type Thimo_2848 IPR022803 Ribosomal protein L5 domain Thimo_2848 IPR031309 Thimo_2848 Thimo_2848 IPR031310 Thimo_2848 Thimo_2849 IPR003256 Ribosomal protein L24 Thimo_2849 IPR005824 KOW Thimo_2849 IPR005825 Ribosomal protein L24/L26, conserved site Thimo_2849 IPR008991 Translation protein SH3-like domain Thimo_2849 IPR014722 Ribosomal protein L2 domain 2 Thimo_2850 IPR000218 Ribosomal protein L14b/L23e Thimo_2850 IPR005745 Ribosomal protein L14, bacterial-type Thimo_2850 IPR019972 Ribosomal protein L14 conserved site Thimo_2850 IPR036853 Thimo_2850 Thimo_2851 IPR000266 Ribosomal protein S17 Thimo_2851 IPR012340 Nucleic acid-binding, OB-fold Thimo_2851 IPR019979 Ribosomal protein S17, conserved site Thimo_2851 IPR019984 Ribosomal protein S17, bacterial-type Thimo_2852 IPR001854 Ribosomal protein L29 Thimo_2852 IPR036049 Thimo_2852 Thimo_2853 IPR000114 Ribosomal protein L16 Thimo_2853 IPR016180 Ribosomal protein L10e/L16 Thimo_2853 IPR020798 Ribosomal protein L16, conserved site Thimo_2853 IPR036920 Thimo_2853 Thimo_2854 IPR001351 Ribosomal protein S3, C-terminal Thimo_2854 IPR004044 K Homology domain, type 2 Thimo_2854 IPR004087 K Homology domain Thimo_2854 IPR005704 Ribosomal protein S3, bacterial Thimo_2854 IPR009019 K homology domain, prokaryotic type Thimo_2854 IPR015946 K homology domain-like, alpha/beta Thimo_2854 IPR018280 Ribosomal protein S3, conserved site Thimo_2854 IPR036419 Thimo_2854 Thimo_2855 IPR001063 Ribosomal protein L22/L17 Thimo_2855 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type Thimo_2855 IPR018260 Ribosomal protein L22/L17, conserved site Thimo_2855 IPR036394 Thimo_2855 Thimo_2856 IPR002222 Ribosomal protein S19/S15 Thimo_2856 IPR005732 Ribosomal protein S19, bacterial-type Thimo_2856 IPR020934 Ribosomal protein S19 conserved site Thimo_2856 IPR023575 Ribosomal protein S19, superfamily Thimo_2857 IPR002171 Ribosomal protein L2 Thimo_2857 IPR005880 Ribosomal protein L2, bacterial/organellar-type Thimo_2857 IPR008991 Translation protein SH3-like domain Thimo_2857 IPR012340 Nucleic acid-binding, OB-fold Thimo_2857 IPR014722 Ribosomal protein L2 domain 2 Thimo_2857 IPR014726 Ribosomal protein L2, domain 3 Thimo_2857 IPR022666 Ribosomal Proteins L2, RNA binding domain Thimo_2857 IPR022669 Ribosomal protein L2, C-terminal Thimo_2857 IPR022671 Ribosomal protein L2, conserved site Thimo_2858 IPR012677 Nucleotide-binding, alpha-beta plait Thimo_2858 IPR012678 Ribosomal protein L23/L15e core domain Thimo_2858 IPR013025 Ribosomal protein L25/L23 Thimo_2859 IPR002136 Ribosomal protein L4/L1e Thimo_2859 IPR013005 Ribosomal protein L4/L1e, bacterial-type Thimo_2859 IPR023574 Ribosomal protein L4 domain Thimo_2860 IPR000597 Ribosomal protein L3 Thimo_2860 IPR009000 Translation protein, beta-barrel domain Thimo_2860 IPR019926 Ribosomal protein L3, conserved site Thimo_2860 IPR019927 Ribosomal protein L3, bacterial/organelle-type Thimo_2861 IPR001848 Ribosomal protein S10 Thimo_2861 IPR027486 Ribosomal protein S10 domain Thimo_2861 IPR036838 Thimo_2861 Thimo_2862 IPR000795 Elongation factor, GTP-binding domain Thimo_2862 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thimo_2862 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Thimo_2862 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Thimo_2862 IPR005225 Small GTP-binding protein domain Thimo_2862 IPR009000 Translation protein, beta-barrel domain Thimo_2862 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thimo_2862 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2862 IPR031157 Thimo_2862 Thimo_2863 IPR000640 Translation elongation factor EFG, V domain Thimo_2863 IPR000795 Elongation factor, GTP-binding domain Thimo_2863 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Thimo_2863 IPR004540 Translation elongation factor EFG/EF2 Thimo_2863 IPR005225 Small GTP-binding protein domain Thimo_2863 IPR005517 Translation elongation factor EFG/EF2, domain IV Thimo_2863 IPR009000 Translation protein, beta-barrel domain Thimo_2863 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_2863 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_2863 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2863 IPR031157 Thimo_2863 Thimo_2863 IPR035647 Thimo_2863 Thimo_2864 IPR000235 Ribosomal protein S5/S7 Thimo_2864 IPR005717 Ribosomal protein S7, bacterial/organellar-type Thimo_2864 IPR020606 Ribosomal protein S7, conserved site Thimo_2864 IPR023798 Ribosomal protein S7 domain Thimo_2864 IPR036823 Thimo_2864 Thimo_2865 IPR005679 Ribosomal protein S12, bacteria Thimo_2865 IPR006032 Ribosomal protein S12/S23 Thimo_2865 IPR012340 Nucleic acid-binding, OB-fold Thimo_2866 IPR000722 RNA polymerase, alpha subunit Thimo_2866 IPR006592 RNA polymerase, N-terminal Thimo_2866 IPR007066 RNA polymerase Rpb1, domain 3 Thimo_2866 IPR007080 RNA polymerase Rpb1, domain 1 Thimo_2866 IPR007081 RNA polymerase Rpb1, domain 5 Thimo_2866 IPR007083 RNA polymerase Rpb1, domain 4 Thimo_2866 IPR012754 DNA-directed RNA polymerase, subunit beta-prime Thimo_2866 IPR038120 Thimo_2866 Thimo_2867 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 Thimo_2867 IPR007121 RNA polymerase, beta subunit, conserved site Thimo_2867 IPR007641 RNA polymerase Rpb2, domain 7 Thimo_2867 IPR007642 RNA polymerase Rpb2, domain 2 Thimo_2867 IPR007644 RNA polymerase, beta subunit, protrusion Thimo_2867 IPR007645 RNA polymerase Rpb2, domain 3 Thimo_2867 IPR010243 DNA-directed RNA polymerase, beta subunit Thimo_2867 IPR014724 RNA polymerase Rpb2, OB-fold Thimo_2867 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain Thimo_2867 IPR037033 Thimo_2867 Thimo_2867 IPR037034 Thimo_2867 Thimo_2868 IPR000206 Ribosomal protein L7/L12 Thimo_2868 IPR008932 Ribosomal protein L7/L12, oligomerisation Thimo_2868 IPR013823 Ribosomal protein L7/L12, C-terminal Thimo_2868 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Thimo_2868 IPR036235 Thimo_2868 Thimo_2869 IPR001790 Ribosomal protein L10/acidic P0 Thimo_2869 IPR002363 Ribosomal protein L10, eubacterial, conserved site Thimo_2869 IPR022973 Ribosomal protein L10 Thimo_2870 IPR002143 Ribosomal protein L1 Thimo_2870 IPR005878 Ribosomal protein L1, bacterial-type Thimo_2870 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Thimo_2870 IPR023673 Ribosomal protein L1, conserved site Thimo_2870 IPR023674 Ribosomal protein L1-like Thimo_2870 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Thimo_2871 IPR000911 Ribosomal protein L11/L12 Thimo_2871 IPR006519 Ribosomal protein L11, bacterial-type Thimo_2871 IPR020783 Ribosomal protein L11, C-terminal Thimo_2871 IPR020784 Ribosomal protein L11, N-terminal Thimo_2871 IPR036769 Thimo_2871 Thimo_2871 IPR036796 Thimo_2871 Thimo_2872 IPR001062 Transcription antitermination protein, NusG Thimo_2872 IPR005824 KOW Thimo_2872 IPR006645 NusG, N-terminal Thimo_2872 IPR008991 Translation protein SH3-like domain Thimo_2872 IPR014722 Ribosomal protein L2 domain 2 Thimo_2872 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Thimo_2872 IPR036735 Thimo_2872 Thimo_2873 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit Thimo_2873 IPR005807 SecE subunit of protein translocation complex Thimo_2873 IPR038379 Thimo_2873 Thimo_2875 IPR000795 Elongation factor, GTP-binding domain Thimo_2875 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Thimo_2875 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 Thimo_2875 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle Thimo_2875 IPR005225 Small GTP-binding protein domain Thimo_2875 IPR009000 Translation protein, beta-barrel domain Thimo_2875 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Thimo_2875 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2875 IPR031157 Thimo_2875 Thimo_2879 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Thimo_2879 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_2879 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Thimo_2879 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Thimo_2879 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Thimo_2879 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type Thimo_2879 IPR036220 Thimo_2879 Thimo_2879 IPR036291 Thimo_2879 Thimo_2880 IPR005017 Membrane protein, aromatic hydrocarbon degradation Thimo_2883 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_2883 IPR005532 Formylglycine-generating sulphatase enzyme domain Thimo_2883 IPR016187 C-type lectin fold Thimo_2883 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2883 IPR035897 Thimo_2883 Thimo_2885 IPR002686 Transposase IS200-like Thimo_2885 IPR036515 Thimo_2885 Thimo_2887 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_2887 IPR005532 Formylglycine-generating sulphatase enzyme domain Thimo_2887 IPR016187 C-type lectin fold Thimo_2887 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2887 IPR035897 Thimo_2887 Thimo_2888 IPR001737 Ribosomal RNA adenine methylase transferase Thimo_2888 IPR011530 Ribosomal RNA adenine dimethylase Thimo_2888 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site Thimo_2888 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal Thimo_2888 IPR023165 rRNA adenine dimethylase-like Thimo_2888 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2889 IPR003111 Peptidase S16, lon N-terminal Thimo_2889 IPR003593 AAA+ ATPase domain Thimo_2889 IPR003959 ATPase, AAA-type, core Thimo_2889 IPR004815 Lon protease, bacterial/eukaryotic-type Thimo_2889 IPR008268 Peptidase S16, active site Thimo_2889 IPR008269 Peptidase S16, Lon C-terminal Thimo_2889 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_2889 IPR015947 PUA-like domain Thimo_2889 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_2889 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2889 IPR027543 Lon protease, bacterial Thimo_2890 IPR002563 Flavin reductase-like, FMN-binding Thimo_2890 IPR012349 FMN-binding split barrel Thimo_2891 IPR001697 Pyruvate kinase Thimo_2891 IPR011037 Pyruvate kinase-like, insert domain Thimo_2891 IPR015793 Pyruvate kinase, barrel Thimo_2891 IPR015795 Pyruvate kinase, C-terminal Thimo_2891 IPR015806 Pyruvate kinase, beta-barrel insert domain Thimo_2891 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_2891 IPR036918 Thimo_2891 Thimo_2892 IPR000073 Alpha/beta hydrolase fold-1 Thimo_2892 IPR029058 Alpha/Beta hydrolase fold Thimo_2900 IPR001757 Cation-transporting P-type ATPase Thimo_2900 IPR008250 P-type ATPase, A domain Thimo_2900 IPR018303 P-type ATPase, phosphorylation site Thimo_2900 IPR023214 HAD-like domain Thimo_2900 IPR023299 P-type ATPase, cytoplasmic domain N Thimo_2900 IPR027256 Cation-transporting P-type ATPase, subfamily IB Thimo_2900 IPR036412 Thimo_2900 Thimo_2902 IPR036163 Thimo_2902 Thimo_2903 IPR002686 Transposase IS200-like Thimo_2903 IPR036515 Thimo_2903 Thimo_2905 IPR000659 Pyridoxamine 5'-phosphate oxidase Thimo_2905 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain Thimo_2905 IPR012349 FMN-binding split barrel Thimo_2905 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal Thimo_2905 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site Thimo_2907 IPR001264 Glycosyl transferase, family 51 Thimo_2907 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase Thimo_2907 IPR023346 Lysozyme-like domain Thimo_2907 IPR036950 Thimo_2907 Thimo_2908 IPR002123 Phospholipid/glycerol acyltransferase Thimo_2909 IPR000182 GNAT domain Thimo_2909 IPR016181 Acyl-CoA N-acyltransferase Thimo_2911 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_2912 IPR004300 Glycoside hydrolase family 57, N-terminal domain Thimo_2912 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel Thimo_2914 IPR021327 Protein of unknown function DUF2934 Thimo_2915 IPR003414 Polyphosphate kinase Thimo_2915 IPR024953 Polyphosphate kinase middle domain Thimo_2915 IPR025198 Polyphosphate kinase N-terminal domain Thimo_2915 IPR025200 Polyphosphate kinase C-terminal domain Thimo_2915 IPR036830 Thimo_2915 Thimo_2915 IPR036832 Thimo_2915 Thimo_2916 IPR007432 Protein of unknown function DUF480 Thimo_2916 IPR036388 Thimo_2916 Thimo_2916 IPR036390 Thimo_2916 Thimo_2917 IPR003848 Domain of unknown function DUF218 Thimo_2918 IPR000073 Alpha/beta hydrolase fold-1 Thimo_2918 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Thimo_2918 IPR022742 Putative lysophospholipase Thimo_2918 IPR029058 Alpha/Beta hydrolase fold Thimo_2919 IPR000192 Aminotransferase class V domain Thimo_2919 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_2919 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_2919 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_2919 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site Thimo_2920 IPR001638 Extracellular solute-binding protein, family 3 Thimo_2921 IPR000014 PAS domain Thimo_2921 IPR000160 GGDEF domain Thimo_2921 IPR001633 EAL domain Thimo_2921 IPR013767 PAS fold Thimo_2921 IPR029787 Nucleotide cyclase Thimo_2921 IPR035919 Thimo_2921 Thimo_2921 IPR035965 Thimo_2921 Thimo_2929 IPR025738 Aerotolerance-related protein BatD Thimo_2930 IPR002035 von Willebrand factor, type A Thimo_2930 IPR011990 Tetratricopeptide-like helical domain Thimo_2930 IPR019734 Tetratricopeptide repeat Thimo_2930 IPR036465 Thimo_2930 Thimo_2931 IPR002035 von Willebrand factor, type A Thimo_2931 IPR036465 Thimo_2931 Thimo_2932 IPR025489 Protein of unknown function (DUF4381 Thimo_2933 IPR002881 Domain of unknown function DUF58 Thimo_2933 IPR036465 Thimo_2933 Thimo_2934 IPR011703 ATPase, AAA-3 Thimo_2934 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2935 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase Thimo_2935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_2939 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Thimo_2939 IPR015943 WD40/YVTN repeat-like-containing domain Thimo_2940 IPR006664 Outer membrane protein, bacterial Thimo_2940 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal Thimo_2940 IPR036737 Thimo_2940 Thimo_2942 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal Thimo_2942 IPR024072 Dihydrofolate reductase-like domain Thimo_2944 IPR000847 Transcription regulator HTH, LysR Thimo_2944 IPR005119 LysR, substrate-binding Thimo_2944 IPR036388 Thimo_2944 Thimo_2944 IPR036390 Thimo_2944 Thimo_2945 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Thimo_2945 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_2946 IPR018752 Uncharacterised protein family UPF0753 Thimo_2947 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thimo_2947 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thimo_2947 IPR020888 Ribulose bisphosphate carboxylase, large subunit Thimo_2947 IPR036376 Thimo_2947 Thimo_2947 IPR036422 Thimo_2947 Thimo_2948 IPR000894 Ribulose bisphosphate carboxylase small chain, domain Thimo_2948 IPR036385 Thimo_2948 Thimo_2949 IPR020990 Carboxysome shell protein Thimo_2950 IPR014074 Carboxysome shell carbonic anhydrase Thimo_2951 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Thimo_2951 IPR014076 Carboxysome peptide A Thimo_2951 IPR036677 Thimo_2951 Thimo_2952 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Thimo_2952 IPR014077 Carboxysome peptide B Thimo_2952 IPR036677 Thimo_2952 Thimo_2953 IPR000249 Microcompartment protein, bacteria Thimo_2953 IPR020808 Bacterial microcompartments protein, conserved site Thimo_2953 IPR037233 Thimo_2953 Thimo_2954 IPR000249 Microcompartment protein, bacteria Thimo_2954 IPR020808 Bacterial microcompartments protein, conserved site Thimo_2954 IPR037233 Thimo_2954 Thimo_2955 IPR002024 Bacterioferritin Thimo_2955 IPR008331 Ferritin/DPS protein domain Thimo_2955 IPR009078 Ferritin-like superfamily Thimo_2955 IPR012347 Ferritin-related Thimo_2956 IPR001533 Transcriptional coactivator/pterin dehydratase Thimo_2956 IPR036428 Thimo_2956 Thimo_2958 IPR000847 Transcription regulator HTH, LysR Thimo_2958 IPR005119 LysR, substrate-binding Thimo_2958 IPR036388 Thimo_2958 Thimo_2958 IPR036390 Thimo_2958 Thimo_2959 IPR000249 Microcompartment protein, bacteria Thimo_2959 IPR037233 Thimo_2959 Thimo_2960 IPR000086 NUDIX hydrolase domain Thimo_2960 IPR015797 NUDIX hydrolase domain-like Thimo_2961 IPR000182 GNAT domain Thimo_2961 IPR016181 Acyl-CoA N-acyltransferase Thimo_2962 IPR003439 ABC transporter-like Thimo_2962 IPR003593 AAA+ ATPase domain Thimo_2962 IPR011527 ABC transporter type 1, transmembrane domain Thimo_2962 IPR017871 ABC transporter, conserved site Thimo_2962 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2962 IPR036640 Thimo_2962 Thimo_2963 IPR015927 Peptidase S24/S26A/S26B/S26C Thimo_2963 IPR036286 Thimo_2963 Thimo_2964 IPR010653 Lipoprotein, NlpB Thimo_2965 IPR002220 DapA-like Thimo_2965 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA Thimo_2965 IPR013785 Aldolase-type TIM barrel Thimo_2965 IPR020624 Dihydrodipicolinate synthetase, conserved site Thimo_2965 IPR020625 Dihydrodipicolinate synthetase, active site Thimo_2966 IPR016867 Glycine cleavage repressor GcvR Thimo_2967 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant Thimo_2967 IPR024706 Peroxiredoxin, AhpC-type Thimo_2967 IPR036249 Thimo_2967 Thimo_2968 IPR002716 PIN domain Thimo_2968 IPR003714 PhoH-like protein Thimo_2968 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2968 IPR029060 PIN domain-like Thimo_2969 IPR001853 DSBA-like thioredoxin domain Thimo_2969 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Thimo_2969 IPR036249 Thimo_2969 Thimo_2970 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Thimo_2970 IPR038418 Thimo_2970 Thimo_2971 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_2971 IPR018317 Queuosine biosynthesis protein QueC Thimo_2972 IPR005913 dTDP-4-dehydrorhamnose reductase Thimo_2972 IPR029903 Thimo_2972 Thimo_2972 IPR036291 Thimo_2972 Thimo_2974 IPR000424 Primosome PriB/single-strand DNA-binding Thimo_2974 IPR011344 Single-stranded DNA-binding protein Thimo_2974 IPR012340 Nucleic acid-binding, OB-fold Thimo_2975 IPR011701 Major facilitator superfamily Thimo_2975 IPR036259 Thimo_2975 Thimo_2976 IPR002327 Cytochrome c, class IA/ IB Thimo_2976 IPR009056 Cytochrome c-like domain Thimo_2976 IPR036909 Thimo_2976 Thimo_2977 IPR000572 Oxidoreductase, molybdopterin-binding domain Thimo_2977 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation Thimo_2977 IPR008335 Eukaryotic molybdopterin oxidoreductase Thimo_2977 IPR014756 Immunoglobulin E-set Thimo_2977 IPR036374 Thimo_2977 Thimo_2978 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_2979 IPR009915 NnrU Thimo_2980 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase Thimo_2980 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Thimo_2980 IPR017850 Alkaline-phosphatase-like, core domain Thimo_2981 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Thimo_2981 IPR012674 Calycin Thimo_2981 IPR022271 Lipocalin, ApoD type Thimo_2981 IPR022272 Lipocalin family conserved site Thimo_2982 IPR002937 Amine oxidase Thimo_2982 IPR036188 Thimo_2982 Thimo_2985 IPR003439 ABC transporter-like Thimo_2985 IPR003593 AAA+ ATPase domain Thimo_2985 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal Thimo_2985 IPR017871 ABC transporter, conserved site Thimo_2985 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_2986 IPR011051 RmlC-like cupin domain Thimo_2986 IPR013096 Cupin 2, conserved barrel Thimo_2986 IPR014710 RmlC-like jelly roll fold Thimo_2987 IPR000066 Antenna complex, alpha/beta subunit Thimo_2987 IPR018332 Antenna complex, alpha subunit Thimo_2987 IPR035889 Thimo_2987 Thimo_2988 IPR000066 Antenna complex, alpha/beta subunit Thimo_2988 IPR002362 Antenna complex, beta subunit Thimo_2988 IPR035889 Thimo_2988 Thimo_2989 IPR000066 Antenna complex, alpha/beta subunit Thimo_2989 IPR002361 Antenna complex, alpha subunit conserved site Thimo_2989 IPR018332 Antenna complex, alpha subunit Thimo_2989 IPR035889 Thimo_2989 Thimo_2990 IPR000066 Antenna complex, alpha/beta subunit Thimo_2990 IPR002361 Antenna complex, alpha subunit conserved site Thimo_2990 IPR018332 Antenna complex, alpha subunit Thimo_2990 IPR035889 Thimo_2990 Thimo_2991 IPR000066 Antenna complex, alpha/beta subunit Thimo_2991 IPR002362 Antenna complex, beta subunit Thimo_2991 IPR035889 Thimo_2991 Thimo_2992 IPR000066 Antenna complex, alpha/beta subunit Thimo_2992 IPR018332 Antenna complex, alpha subunit Thimo_2992 IPR035889 Thimo_2992 Thimo_2993 IPR000066 Antenna complex, alpha/beta subunit Thimo_2993 IPR002362 Antenna complex, beta subunit Thimo_2993 IPR035889 Thimo_2993 Thimo_2994 IPR000066 Antenna complex, alpha/beta subunit Thimo_2994 IPR002361 Antenna complex, alpha subunit conserved site Thimo_2994 IPR018332 Antenna complex, alpha subunit Thimo_2994 IPR035889 Thimo_2994 Thimo_2995 IPR000066 Antenna complex, alpha/beta subunit Thimo_2995 IPR002362 Antenna complex, beta subunit Thimo_2995 IPR035889 Thimo_2995 Thimo_2996 IPR003158 Photosynthetic reaction centre, cytochrome c subunit Thimo_2996 IPR023119 Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like Thimo_2996 IPR036280 Thimo_2996 Thimo_2997 IPR000484 Photosynthetic reaction centre, L/M Thimo_2997 IPR005781 Photosynthetic reaction centre, M subunit Thimo_2997 IPR036854 Thimo_2997 Thimo_2998 IPR000484 Photosynthetic reaction centre, L/M Thimo_2998 IPR005871 Photosynthetic reaction centre, L subunit Thimo_2998 IPR036854 Thimo_2998 Thimo_2999 IPR000066 Antenna complex, alpha/beta subunit Thimo_2999 IPR018332 Antenna complex, alpha subunit Thimo_2999 IPR035889 Thimo_2999 Thimo_3000 IPR000066 Antenna complex, alpha/beta subunit Thimo_3000 IPR002362 Antenna complex, beta subunit Thimo_3000 IPR035889 Thimo_3000 Thimo_3001 IPR000066 Antenna complex, alpha/beta subunit Thimo_3001 IPR018332 Antenna complex, alpha subunit Thimo_3001 IPR035889 Thimo_3001 Thimo_3002 IPR000066 Antenna complex, alpha/beta subunit Thimo_3002 IPR002362 Antenna complex, beta subunit Thimo_3002 IPR035889 Thimo_3002 Thimo_3003 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3003 IPR010244 Chlorophyllide reductase subunit Z Thimo_3003 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Thimo_3003 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thimo_3004 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3004 IPR010245 Chlorophyllide reductase subunit Y Thimo_3004 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thimo_3005 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL Thimo_3005 IPR010246 Chlorophyllide reductase iron protein subunit X Thimo_3005 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3005 IPR030655 Thimo_3005 Thimo_3006 IPR005903 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase Thimo_3006 IPR011032 GroES (chaperonin 10)-like Thimo_3006 IPR013154 Alcohol dehydrogenase GroES-like Thimo_3006 IPR036291 Thimo_3006 Thimo_3007 IPR001077 O-methyltransferase, family 2 Thimo_3007 IPR016461 Caffeate O-methyltransferase (COMT) family Thimo_3007 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3007 IPR031725 Thimo_3007 Thimo_3007 IPR036390 Thimo_3007 Thimo_3008 IPR000092 Polyprenyl synthetase Thimo_3008 IPR008949 Terpenoid synthase Thimo_3008 IPR033749 Thimo_3008 Thimo_3009 IPR002937 Amine oxidase Thimo_3009 IPR014105 Phytoene desaturase CrtI family Thimo_3009 IPR036188 Thimo_3009 Thimo_3011 IPR008949 Terpenoid synthase Thimo_3011 IPR019845 Squalene/phytoene synthase, conserved site Thimo_3012 IPR002937 Amine oxidase Thimo_3012 IPR014105 Phytoene desaturase CrtI family Thimo_3012 IPR036188 Thimo_3012 Thimo_3013 IPR000073 Alpha/beta hydrolase fold-1 Thimo_3013 IPR000639 Epoxide hydrolase-like Thimo_3013 IPR017497 Putative magnesium chelatase accessory protein Thimo_3013 IPR029058 Alpha/Beta hydrolase fold Thimo_3014 IPR002035 von Willebrand factor, type A Thimo_3014 IPR011776 Magnesium chelatase, ATPase subunit D Thimo_3014 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3014 IPR036465 Thimo_3014 Thimo_3015 IPR000523 Magnesium chelatase, ChlI subunit Thimo_3015 IPR003593 AAA+ ATPase domain Thimo_3015 IPR011775 Magnesium chelatase, ATPase subunit I Thimo_3015 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3016 IPR017496 Photosynthetic complex assembly protein 2, putative Thimo_3018 IPR005182 Domain of unknown function DUF304 Thimo_3019 IPR005652 Photosynthetic reaction centre, H subunit Thimo_3019 IPR011033 PRC-barrel-like Thimo_3019 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal Thimo_3019 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal Thimo_3019 IPR027275 PRC-barrel domain Thimo_3019 IPR037097 Thimo_3019 Thimo_3020 IPR004896 PucC-related Thimo_3020 IPR026036 PucC protein Thimo_3020 IPR036259 Thimo_3020 Thimo_3021 IPR010251 Magnesium-protoporphyrin IX methyltransferase Thimo_3021 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal Thimo_3021 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3022 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL Thimo_3022 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein Thimo_3022 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3022 IPR030655 Thimo_3022 Thimo_3023 IPR003672 CobN/magnesium chelatase Thimo_3023 IPR011771 Magnesium-chelatase, subunit H Thimo_3023 IPR022571 Magnesium chelatase, subunit H, N-terminal Thimo_3024 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3024 IPR005969 Light-independent protochlorophyllide reductase, B subunit Thimo_3024 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal Thimo_3024 IPR016209 Protochlorophyllide reductase, ChlB, light independent Thimo_3025 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3025 IPR005970 Light-independent protochlorophyllide reductase, N subunit Thimo_3026 IPR009905 2-vinyl bacteriochlorophyllide hydratase Thimo_3027 IPR004472 Dethiobiotin synthase BioD Thimo_3027 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3028 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Thimo_3028 IPR013216 Methyltransferase type 11 Thimo_3028 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3029 IPR000073 Alpha/beta hydrolase fold-1 Thimo_3029 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase Thimo_3029 IPR029058 Alpha/Beta hydrolase fold Thimo_3030 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site Thimo_3030 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type Thimo_3030 IPR004839 Aminotransferase, class I/classII Thimo_3030 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_3030 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_3030 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_3030 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria Thimo_3031 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB Thimo_3031 IPR006638 Elongator protein 3/MiaB/NifB Thimo_3031 IPR007197 Radical SAM Thimo_3031 IPR010722 Biotin and thiamin synthesis-associated domain Thimo_3031 IPR013785 Aldolase-type TIM barrel Thimo_3031 IPR024177 Biotin synthase Thimo_3032 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F Thimo_3032 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F Thimo_3032 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site Thimo_3032 IPR020103 Pseudouridine synthase, catalytic domain Thimo_3034 IPR006199 LexA repressor, DNA-binding domain Thimo_3034 IPR036388 Thimo_3034 Thimo_3034 IPR036390 Thimo_3034 Thimo_3037 IPR000073 Alpha/beta hydrolase fold-1 Thimo_3037 IPR000639 Epoxide hydrolase-like Thimo_3037 IPR029058 Alpha/Beta hydrolase fold Thimo_3038 IPR001282 Glucose-6-phosphate dehydrogenase Thimo_3038 IPR019796 Glucose-6-phosphate dehydrogenase, active site Thimo_3038 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding Thimo_3038 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal Thimo_3038 IPR036291 Thimo_3038 Thimo_3039 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site Thimo_3039 IPR004849 6-phosphogluconate dehydrogenase-related protein Thimo_3039 IPR006114 6-phosphogluconate dehydrogenase, C-terminal Thimo_3039 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding Thimo_3039 IPR006183 Thimo_3039 Thimo_3039 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_3039 IPR013328 Dehydrogenase, multihelical Thimo_3039 IPR036291 Thimo_3039 Thimo_3040 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Thimo_3040 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Thimo_3040 IPR008141 Alanine dehydrogenase Thimo_3040 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 Thimo_3040 IPR036291 Thimo_3040 Thimo_3041 IPR001568 Ribonuclease T2-like Thimo_3041 IPR018188 Ribonuclease T2, active site Thimo_3041 IPR033130 Thimo_3041 Thimo_3041 IPR036430 Thimo_3041 Thimo_3042 IPR001404 Heat shock protein Hsp90 family Thimo_3042 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3042 IPR019805 Heat shock protein Hsp90, conserved site Thimo_3042 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_3042 IPR020575 Heat shock protein Hsp90, N-terminal Thimo_3042 IPR036890 Thimo_3042 Thimo_3042 IPR037196 Thimo_3042 Thimo_3043 IPR005841 Alpha-D-phosphohexomutase superfamily Thimo_3043 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Thimo_3043 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Thimo_3043 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Thimo_3043 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Thimo_3043 IPR016066 Alpha-D-phosphohexomutase, conserved site Thimo_3043 IPR036900 Thimo_3043 Thimo_3044 IPR000642 Peptidase M41 Thimo_3044 IPR003593 AAA+ ATPase domain Thimo_3044 IPR003959 ATPase, AAA-type, core Thimo_3044 IPR003960 ATPase, AAA-type, conserved site Thimo_3044 IPR005936 Peptidase, FtsH Thimo_3044 IPR011546 Peptidase M41, FtsH extracellular Thimo_3044 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3044 IPR037219 Thimo_3044 Thimo_3046 IPR000086 NUDIX hydrolase domain Thimo_3046 IPR003564 dATP pyrophosphohydrolase Thimo_3046 IPR015797 NUDIX hydrolase domain-like Thimo_3046 IPR020084 NUDIX hydrolase, conserved site Thimo_3047 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb Thimo_3047 IPR004115 GAD-like domain Thimo_3047 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) Thimo_3047 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Thimo_3047 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type Thimo_3047 IPR012340 Nucleic acid-binding, OB-fold Thimo_3047 IPR029351 GAD domain Thimo_3048 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Thimo_3049 IPR007197 Radical SAM Thimo_3049 IPR013785 Aldolase-type TIM barrel Thimo_3049 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Thimo_3049 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Thimo_3050 IPR002737 MEMO1 family Thimo_3051 IPR002733 AMMECR1 domain Thimo_3051 IPR023473 AMMECR1 Thimo_3051 IPR027485 AMMECR1, N-terminal Thimo_3051 IPR027623 AmmeMemoRadiSam system protein A Thimo_3051 IPR036071 Thimo_3051 Thimo_3053 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related Thimo_3053 IPR011051 RmlC-like cupin domain Thimo_3053 IPR014710 RmlC-like jelly roll fold Thimo_3054 IPR005835 Nucleotidyl transferase Thimo_3054 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form Thimo_3054 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3055 IPR005888 dTDP-glucose 4,6-dehydratase Thimo_3055 IPR016040 NAD(P)-binding domain Thimo_3055 IPR036291 Thimo_3055 Thimo_3057 IPR003362 Bacterial sugar transferase Thimo_3057 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ Thimo_3057 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Thimo_3059 IPR013969 Oligosaccharide biosynthesis protein Alg14-like Thimo_3061 IPR008878 Transposase IS66, Orf2 Thimo_3065 IPR002514 Transposase IS3/IS911family Thimo_3065 IPR009057 Homeodomain-like Thimo_3066 IPR001584 Integrase, catalytic core Thimo_3066 IPR009057 Homeodomain-like Thimo_3066 IPR012337 Ribonuclease H-like domain Thimo_3066 IPR036397 Thimo_3066 Thimo_3069 IPR001173 Glycosyltransferase 2-like Thimo_3069 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3070 IPR001296 Glycosyl transferase, family 1 Thimo_3071 IPR001173 Glycosyltransferase 2-like Thimo_3071 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3072 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal Thimo_3072 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Thimo_3073 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3074 IPR001296 Glycosyl transferase, family 1 Thimo_3074 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain Thimo_3075 IPR013216 Methyltransferase type 11 Thimo_3075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3076 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Thimo_3077 IPR007345 Polysaccharide pyruvyl transferase Thimo_3078 IPR013426 Exosortase, EpsH Thimo_3078 IPR014263 Methanolan biosynthesis EpsI Thimo_3078 IPR019127 Exosortase EpsH-related Thimo_3078 IPR026392 Exosortase/Archaeosortase domain Thimo_3078 IPR026491 Exosortase D, VPLPA-CTERM-specific Thimo_3079 IPR025669 AAA domain Thimo_3079 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3080 IPR003856 Lipopolysaccharide biosynthesis Thimo_3081 IPR023614 Porin domain Thimo_3081 IPR027385 Outer membrane protein beta-barrel Thimo_3082 IPR003715 Polysaccharide export protein Thimo_3082 IPR019554 Soluble ligand binding domain Thimo_3084 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_3084 IPR002197 DNA binding HTH domain, Fis-type Thimo_3084 IPR003593 AAA+ ATPase domain Thimo_3084 IPR009057 Homeodomain-like Thimo_3084 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_3084 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_3084 IPR025944 Sigma-54 interaction domain, conserved site Thimo_3084 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3085 IPR008258 Lytic transglycosylase-like SLT domain Thimo_3085 IPR023346 Lysozyme-like domain Thimo_3086 IPR022265 Conserved hypothetical protein CHP03790 Thimo_3087 IPR000601 PKD domain Thimo_3087 IPR013783 Immunoglobulin-like fold Thimo_3087 IPR022409 PKD/Chitinase domain Thimo_3087 IPR035986 Thimo_3087 Thimo_3087 IPR036116 Thimo_3087 Thimo_3089 IPR011990 Tetratricopeptide-like helical domain Thimo_3089 IPR019734 Tetratricopeptide repeat Thimo_3090 IPR025193 Domain of unknown function DUF4114 Thimo_3092 IPR011990 Tetratricopeptide-like helical domain Thimo_3092 IPR019734 Tetratricopeptide repeat Thimo_3094 IPR000601 PKD domain Thimo_3094 IPR013783 Immunoglobulin-like fold Thimo_3094 IPR022409 PKD/Chitinase domain Thimo_3094 IPR035986 Thimo_3094 Thimo_3094 IPR036116 Thimo_3094 Thimo_3097 IPR006218 DAHP synthetase I/KDSA Thimo_3097 IPR006219 DHAP synthase, class 1 Thimo_3097 IPR013785 Aldolase-type TIM barrel Thimo_3098 IPR001650 Helicase, C-terminal Thimo_3098 IPR002121 HRDC domain Thimo_3098 IPR004589 DNA helicase, ATP-dependent, RecQ type Thimo_3098 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial Thimo_3098 IPR010997 HRDC-like Thimo_3098 IPR011545 DEAD/DEAH box helicase domain Thimo_3098 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_3098 IPR018982 RQC domain Thimo_3098 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3098 IPR029491 Helicase Helix-turn-helix domain Thimo_3098 IPR032284 Thimo_3098 Thimo_3098 IPR036388 Thimo_3098 Thimo_3100 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_3100 IPR016174 Di-haem cytochrome, transmembrane Thimo_3101 IPR011701 Major facilitator superfamily Thimo_3101 IPR036259 Thimo_3101 Thimo_3102 IPR007476 Putative exonuclease, RdgC Thimo_3103 IPR007922 Protein of unknown function DUF721/UPF0232 Thimo_3104 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase Thimo_3104 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal Thimo_3104 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal Thimo_3104 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_3105 IPR000158 Cell division protein FtsZ Thimo_3105 IPR003008 Tubulin/FtsZ, GTPase domain Thimo_3105 IPR008280 Tubulin/FtsZ, C-terminal Thimo_3105 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Thimo_3105 IPR020805 Cell division protein FtsZ, conserved site Thimo_3105 IPR024757 Cell division protein FtsZ, C-terminal Thimo_3105 IPR036525 Thimo_3105 Thimo_3105 IPR037103 Thimo_3105 Thimo_3106 IPR003494 SHS2 domain inserted in FtsA Thimo_3106 IPR020823 Cell division protein FtsA Thimo_3107 IPR005548 Cell division protein FtsQ/DivIB Thimo_3107 IPR013685 Polypeptide-transport-associated, FtsQ-type Thimo_3107 IPR026579 Cell division protein FtsQ Thimo_3108 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site Thimo_3108 IPR005905 D-alanine--D-alanine ligase Thimo_3108 IPR011095 D-alanine--D-alanine ligase, C-terminal Thimo_3108 IPR011127 D-alanine--D-alanine ligase, N-terminal domain Thimo_3108 IPR013815 ATP-grasp fold, subdomain 1 Thimo_3108 IPR016185 Pre-ATP-grasp domain Thimo_3109 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase Thimo_3109 IPR006094 FAD linked oxidase, N-terminal Thimo_3109 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal Thimo_3109 IPR016167 FAD-binding, type 2, subdomain 1 Thimo_3109 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 Thimo_3109 IPR036318 Thimo_3109 Thimo_3109 IPR036635 Thimo_3109 Thimo_3110 IPR000713 Mur ligase, N-terminal Thimo_3110 IPR004101 Mur ligase, C-terminal Thimo_3110 IPR005758 UDP-N-acetylmuramate-alanine ligase Thimo_3110 IPR013221 Mur ligase, central Thimo_3110 IPR036565 Thimo_3110 Thimo_3110 IPR036615 Thimo_3110 Thimo_3111 IPR004276 Glycosyl transferase, family 28 Thimo_3111 IPR006009 N-acetylglucosaminyltransferase, MurG Thimo_3111 IPR007235 Glycosyl transferase, family 28, C-terminal Thimo_3112 IPR001182 Cell cycle protein FtsW/RodA Thimo_3112 IPR013437 Cell division protein FtsW Thimo_3113 IPR004101 Mur ligase, C-terminal Thimo_3113 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase Thimo_3113 IPR013221 Mur ligase, central Thimo_3113 IPR036565 Thimo_3113 Thimo_3113 IPR036615 Thimo_3113 Thimo_3114 IPR000715 Glycosyl transferase, family 4 Thimo_3114 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase Thimo_3114 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site Thimo_3115 IPR000713 Mur ligase, N-terminal Thimo_3115 IPR004101 Mur ligase, C-terminal Thimo_3115 IPR005863 UDP-MurNAc-pentapeptide synthetase Thimo_3115 IPR013221 Mur ligase, central Thimo_3115 IPR035911 Thimo_3115 Thimo_3115 IPR036565 Thimo_3115 Thimo_3115 IPR036615 Thimo_3115 Thimo_3116 IPR000713 Mur ligase, N-terminal Thimo_3116 IPR004101 Mur ligase, C-terminal Thimo_3116 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase Thimo_3116 IPR013221 Mur ligase, central Thimo_3116 IPR035911 Thimo_3116 Thimo_3116 IPR036565 Thimo_3116 Thimo_3116 IPR036615 Thimo_3116 Thimo_3117 IPR001460 Penicillin-binding protein, transpeptidase Thimo_3117 IPR005311 Penicillin-binding protein, dimerisation domain Thimo_3117 IPR012338 Beta-lactamase/transpeptidase-like Thimo_3117 IPR036138 Thimo_3117 Thimo_3117 IPR037532 Thimo_3117 Thimo_3118 IPR011922 Cell division protein FtsL Thimo_3119 IPR002903 Ribosomal RNA small subunit methyltransferase H Thimo_3119 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain Thimo_3119 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3120 IPR003444 MraZ Thimo_3120 IPR020603 MraZ domain Thimo_3120 IPR037914 Thimo_3120 Thimo_3120 IPR038619 Thimo_3120 Thimo_3122 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase Thimo_3123 IPR013078 Histidine phosphatase superfamily, clade-1 Thimo_3123 IPR029033 Histidine phosphatase superfamily Thimo_3124 IPR002539 MaoC-like domain Thimo_3124 IPR029069 HotDog domain Thimo_3125 IPR003439 ABC transporter-like Thimo_3125 IPR003593 AAA+ ATPase domain Thimo_3125 IPR017871 ABC transporter, conserved site Thimo_3125 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3126 IPR013525 ABC-2 type transporter Thimo_3127 IPR000594 UBA/THIF-type NAD/FAD binding fold Thimo_3127 IPR035985 Thimo_3127 Thimo_3129 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_3129 IPR004556 Modification methylase HemK Thimo_3129 IPR007848 Methyltransferase small domain Thimo_3129 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific Thimo_3129 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3130 IPR000352 Peptide chain release factor class I/class II Thimo_3130 IPR004373 Peptide chain release factor 1 Thimo_3130 IPR005139 Peptide chain release factor Thimo_3131 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase Thimo_3131 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Thimo_3131 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal Thimo_3131 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain Thimo_3131 IPR018214 Glutamyl-tRNA reductase, conserved site Thimo_3131 IPR036291 Thimo_3131 Thimo_3131 IPR036343 Thimo_3131 Thimo_3131 IPR036453 Thimo_3131 Thimo_3132 IPR011990 Tetratricopeptide-like helical domain Thimo_3132 IPR019734 Tetratricopeptide repeat Thimo_3133 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Thimo_3133 IPR006204 GHMP kinase N-terminal domain Thimo_3133 IPR013750 GHMP kinase, C-terminal domain Thimo_3133 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Thimo_3133 IPR020568 Ribosomal protein S5 domain 2-type fold Thimo_3133 IPR036554 Thimo_3133 Thimo_3135 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site Thimo_3135 IPR005946 Ribose-phosphate diphosphokinase Thimo_3135 IPR029057 Phosphoribosyltransferase-like Thimo_3135 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Thimo_3135 IPR037515 Thimo_3135 Thimo_3136 IPR001021 Ribosomal protein L25, long-form Thimo_3136 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain Thimo_3136 IPR020055 Ribosomal protein L25, short-form Thimo_3136 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Thimo_3136 IPR020057 Ribosomal protein L25, beta domain Thimo_3136 IPR029751 Ribosomal protein L25 Thimo_3136 IPR037121 Thimo_3136 Thimo_3137 IPR001328 Peptidyl-tRNA hydrolase Thimo_3137 IPR018171 Peptidyl-tRNA hydrolase, conserved site Thimo_3137 IPR036416 Thimo_3137 Thimo_3138 IPR005886 UDP-glucose 4-epimerase GalE Thimo_3138 IPR016040 NAD(P)-binding domain Thimo_3138 IPR036291 Thimo_3138 Thimo_3141 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3141 IPR003660 HAMP linker domain Thimo_3141 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3141 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3141 IPR036097 Thimo_3141 Thimo_3141 IPR036890 Thimo_3141 Thimo_3142 IPR001789 Signal transduction response regulator, receiver domain Thimo_3142 IPR001867 Signal transduction response regulator, C-terminal Thimo_3142 IPR011006 CheY-like superfamily Thimo_3142 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_3142 IPR036388 Thimo_3142 Thimo_3143 IPR006143 RND efflux pump, membrane fusion protein Thimo_3143 IPR032317 Thimo_3143 Thimo_3144 IPR001036 Acriflavin resistance protein Thimo_3144 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 Thimo_3144 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_3145 IPR003423 Outer membrane efflux protein Thimo_3145 IPR010131 RND efflux system, outer membrane lipoprotein, NodT Thimo_3146 IPR009057 Homeodomain-like Thimo_3146 IPR018060 DNA binding HTH domain, AraC-type Thimo_3146 IPR018062 HTH domain AraC-type, conserved site Thimo_3147 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_3147 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3148 IPR009241 Addiction module killer protein Thimo_3151 IPR005752 DNA helicase, ATP-dependent, RepA type Thimo_3151 IPR013986 DExx box DNA helicase domain Thimo_3151 IPR014017 DNA helicase, UvrD-like, C-terminal Thimo_3151 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3151 IPR034739 Thimo_3151 Thimo_3152 IPR018729 Protein of unknown function DUF2269, transmembrane Thimo_3154 IPR006073 GTP binding domain Thimo_3154 IPR021871 Protein of unknown function DUF3482 Thimo_3154 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3155 IPR021296 Protein of unknown function DUF2868 Thimo_3156 IPR004254 Hly-III-related Thimo_3156 IPR005744 HylII Thimo_3157 IPR003439 ABC transporter-like Thimo_3157 IPR003593 AAA+ ATPase domain Thimo_3157 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3158 IPR019196 ABC-type uncharacterised transport system Thimo_3158 IPR032688 Thimo_3158 Thimo_3159 IPR025641 Domain of unknown function DUF4340 Thimo_3160 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site Thimo_3160 IPR013078 Histidine phosphatase superfamily, clade-1 Thimo_3160 IPR029033 Histidine phosphatase superfamily Thimo_3161 IPR000160 GGDEF domain Thimo_3161 IPR029787 Nucleotide cyclase Thimo_3161 IPR033479 Thimo_3161 Thimo_3162 IPR005490 L,D-transpeptidase catalytic domain Thimo_3162 IPR038063 Thimo_3162 Thimo_3163 IPR000868 Isochorismatase-like Thimo_3163 IPR036380 Thimo_3163 Thimo_3164 IPR012902 Prokaryotic N-terminal methylation site Thimo_3164 IPR031982 Thimo_3164 Thimo_3165 IPR008707 PilC beta-propeller domain Thimo_3165 IPR018247 EF-Hand 1, calcium-binding site Thimo_3166 IPR025205 PilX/PilW C-terminal domain Thimo_3166 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain Thimo_3167 IPR012902 Prokaryotic N-terminal methylation site Thimo_3167 IPR032092 Thimo_3167 Thimo_3168 IPR012902 Prokaryotic N-terminal methylation site Thimo_3168 IPR013362 Pilus modification type IV, PilV Thimo_3169 IPR012902 Prokaryotic N-terminal methylation site Thimo_3169 IPR022346 General secretion pathway, GspH Thimo_3171 IPR001650 Helicase, C-terminal Thimo_3171 IPR003593 AAA+ ATPase domain Thimo_3171 IPR007502 Helicase-associated domain Thimo_3171 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type Thimo_3171 IPR011709 Domain of unknown function DUF1605 Thimo_3171 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_3171 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal Thimo_3171 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3172 IPR000177 Apple domain Thimo_3172 IPR001599 Alpha-2-macroglobulin Thimo_3172 IPR002890 Alpha-2-macroglobulin, N-terminal Thimo_3172 IPR003609 Apple-like Thimo_3172 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Thimo_3172 IPR011625 Alpha-2-macroglobulin, N-terminal 2 Thimo_3172 IPR011990 Tetratricopeptide-like helical domain Thimo_3172 IPR026284 Alpha-2-macroglobulin domain protein, bacteria Thimo_3173 IPR001264 Glycosyl transferase, family 51 Thimo_3173 IPR001460 Penicillin-binding protein, transpeptidase Thimo_3173 IPR004827 Basic-leucine zipper domain Thimo_3173 IPR009647 Penicillin-binding, C-terminal Thimo_3173 IPR011815 Penicillin-binding protein 1C Thimo_3173 IPR012338 Beta-lactamase/transpeptidase-like Thimo_3173 IPR023346 Lysozyme-like domain Thimo_3173 IPR036950 Thimo_3173 Thimo_3175 IPR002686 Transposase IS200-like Thimo_3175 IPR036515 Thimo_3175 Thimo_3178 IPR003787 Sulphur relay, DsrE/F-like protein Thimo_3178 IPR027396 DsrEFH-like Thimo_3180 IPR003439 ABC transporter-like Thimo_3180 IPR003593 AAA+ ATPase domain Thimo_3180 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3181 IPR000515 MetI-like domain Thimo_3181 IPR035906 Thimo_3181 Thimo_3182 IPR005950 Molybdenum ABC transporter, periplasmic binding protein Thimo_3183 IPR002491 ABC transporter periplasmic binding domain Thimo_3184 IPR000531 TonB-dependent receptor, beta-barrel Thimo_3184 IPR010916 TonB box, conserved site Thimo_3184 IPR036942 Thimo_3184 Thimo_3185 IPR006260 TonB, C-terminal Thimo_3185 IPR037682 Thimo_3185 Thimo_3186 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_3187 IPR002898 MotA/TolQ/ExbB proton channel Thimo_3188 IPR000572 Oxidoreductase, molybdopterin-binding domain Thimo_3188 IPR036374 Thimo_3188 Thimo_3189 IPR000531 TonB-dependent receptor, beta-barrel Thimo_3189 IPR012910 TonB-dependent receptor, plug Thimo_3189 IPR036942 Thimo_3189 Thimo_3189 IPR037066 Thimo_3189 Thimo_3191 IPR002915 DeoC/FbaB/ lacD aldolase Thimo_3191 IPR013785 Aldolase-type TIM barrel Thimo_3192 IPR002223 Proteinase inhibitor I2, Kunitz metazoa Thimo_3192 IPR036880 Thimo_3192 Thimo_3193 IPR002765 Uncharacterised protein family UPF0145 Thimo_3193 IPR035439 Thimo_3193 Thimo_3195 IPR023214 HAD-like domain Thimo_3195 IPR036412 Thimo_3195 Thimo_3196 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3196 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3196 IPR036097 Thimo_3196 Thimo_3196 IPR036890 Thimo_3196 Thimo_3197 IPR001789 Signal transduction response regulator, receiver domain Thimo_3197 IPR001867 Signal transduction response regulator, C-terminal Thimo_3197 IPR011006 CheY-like superfamily Thimo_3197 IPR036388 Thimo_3197 Thimo_3200 IPR011105 Cell wall hydrolase, SleB Thimo_3201 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Thimo_3201 IPR035437 Thimo_3201 Thimo_3202 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_3202 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3203 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_3203 IPR003918 NADH:ubiquinone oxidoreductase Thimo_3204 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thimo_3206 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_3206 IPR003918 NADH:ubiquinone oxidoreductase Thimo_3207 IPR001135 NADH-quinone oxidoreductase, subunit D Thimo_3207 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thimo_3207 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_3207 IPR029014 NiFe hydrogenase-like Thimo_3207 IPR037232 Thimo_3207 Thimo_3207 IPR038290 Thimo_3207 Thimo_3208 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_3209 IPR003795 Protein of unknown function DUF192 Thimo_3209 IPR038695 Thimo_3209 Thimo_3211 IPR002934 Nucleotidyl transferase domain Thimo_3212 IPR008201 Protein of unknown function DUF86 Thimo_3214 IPR021139 NYN domain, limkain-b1-type Thimo_3220 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_3220 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3221 IPR009387 Toxin HigB Thimo_3222 IPR002716 PIN domain Thimo_3222 IPR022907 VapC family Thimo_3222 IPR029060 PIN domain-like Thimo_3223 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Thimo_3223 IPR036165 Thimo_3223 Thimo_3224 IPR000330 SNF2-related Thimo_3224 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_3224 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3224 IPR038718 Thimo_3224 Thimo_3225 IPR007460 Burkholderia phage Bups phi1, Orf7.3 Thimo_3225 IPR038573 Thimo_3225 Thimo_3226 IPR025528 Protein of unknown function DUF4415 Thimo_3227 IPR002121 HRDC domain Thimo_3227 IPR003593 AAA+ ATPase domain Thimo_3227 IPR003840 DNA helicase Thimo_3227 IPR010285 DNA helicase Pif1 like Thimo_3227 IPR010997 HRDC-like Thimo_3227 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3227 IPR029491 Helicase Helix-turn-helix domain Thimo_3228 IPR002347 Glucose/ribitol dehydrogenase Thimo_3228 IPR036291 Thimo_3228 Thimo_3230 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thimo_3230 IPR014282 Nitrogen fixation protein NifM Thimo_3230 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thimo_3230 IPR027304 Trigger factor/SurA domain Thimo_3231 IPR007415 Nitrogenase MoFe maturation protein, NifZ Thimo_3232 IPR004893 Nitrogen fixation protein NifW Thimo_3233 IPR011990 Tetratricopeptide-like helical domain Thimo_3234 IPR000891 Pyruvate carboxyltransferase Thimo_3234 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thimo_3234 IPR013477 Homocitrate synthase NifV-type Thimo_3234 IPR013785 Aldolase-type TIM barrel Thimo_3235 IPR001821 [NiFe]-hydrogenase, small subunit Thimo_3235 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_3235 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thimo_3235 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thimo_3235 IPR037024 Thimo_3235 Thimo_3235 IPR037148 Thimo_3235 Thimo_3236 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_3236 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thimo_3236 IPR029014 NiFe hydrogenase-like Thimo_3237 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit Thimo_3237 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_3237 IPR016174 Di-haem cytochrome, transmembrane Thimo_3238 IPR000671 Peptidase A31 family Thimo_3238 IPR004419 Peptidase A31, hydrogenase expression/formation protein Thimo_3238 IPR023430 Peptidase HybD-like domain Thimo_3240 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_3240 IPR031763 Thimo_3240 Thimo_3240 IPR036105 Thimo_3240 Thimo_3240 IPR038127 Thimo_3240 Thimo_3241 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_3241 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3242 IPR009727 NifT/FixU Thimo_3242 IPR024044 NifT/FixU barrel-like domain Thimo_3243 IPR000318 Nitrogenase component 1, conserved site Thimo_3243 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3243 IPR005976 Nitrogenase molybdenum-iron protein beta chain Thimo_3243 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal Thimo_3244 IPR000318 Nitrogenase component 1, conserved site Thimo_3244 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3244 IPR005972 Nitrogenase molybdenum-iron protein alpha chain Thimo_3244 IPR010143 Nitrogenase component 1, alpha chain Thimo_3245 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL Thimo_3245 IPR005977 Nitrogenase iron protein NifH Thimo_3245 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3245 IPR030655 Thimo_3245 Thimo_3246 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase Thimo_3247 IPR005126 NapC/NirT cytochrome c, N-terminal Thimo_3247 IPR024717 Denitrification system component NapC/NirT/NrfH Thimo_3247 IPR036280 Thimo_3247 Thimo_3247 IPR038266 Thimo_3247 Thimo_3248 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site Thimo_3248 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_3248 IPR005980 Nitrogenase cofactor biosynthesis protein NifB Thimo_3248 IPR007197 Radical SAM Thimo_3248 IPR013055 Tachykinin/Neurokinin-like, conserved site Thimo_3248 IPR013785 Aldolase-type TIM barrel Thimo_3248 IPR036105 Thimo_3248 Thimo_3249 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3250 IPR001226 Flavodoxin, conserved site Thimo_3250 IPR001279 Beta-lactamase-like Thimo_3250 IPR008254 Flavodoxin/nitric oxide synthase Thimo_3250 IPR016440 Rubredoxin-oxygen oxidoreductase Thimo_3250 IPR029039 Flavoprotein-like Thimo_3250 IPR036866 Thimo_3250 Thimo_3251 IPR001041 2Fe-2S ferredoxin-type domain Thimo_3251 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site Thimo_3251 IPR012675 Beta-grasp domain Thimo_3251 IPR036010 Thimo_3251 Thimo_3252 IPR001041 2Fe-2S ferredoxin-type domain Thimo_3252 IPR012675 Beta-grasp domain Thimo_3252 IPR036010 Thimo_3252 Thimo_3253 IPR006975 NifQ Thimo_3254 IPR005502 ADP-ribosylation/Crystallin J1 Thimo_3254 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase Thimo_3254 IPR036705 Thimo_3254 Thimo_3255 IPR000014 PAS domain Thimo_3255 IPR000160 GGDEF domain Thimo_3255 IPR029787 Nucleotide cyclase Thimo_3255 IPR035965 Thimo_3255 Thimo_3257 IPR023614 Porin domain Thimo_3259 IPR002505 Phosphate acetyl/butaryl transferase Thimo_3259 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase Thimo_3259 IPR012301 Malic enzyme, N-terminal domain Thimo_3259 IPR012302 Malic enzyme, NAD-binding Thimo_3259 IPR036291 Thimo_3259 Thimo_3259 IPR037062 Thimo_3259 Thimo_3261 IPR010233 Ubiquinone biosynthesis O-methyltransferase Thimo_3261 IPR013216 Methyltransferase type 11 Thimo_3261 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3262 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Thimo_3262 IPR004843 Calcineurin-like phosphoesterase domain, apaH type Thimo_3262 IPR029052 Metallo-dependent phosphatase-like Thimo_3263 IPR007474 ApaG domain Thimo_3263 IPR023065 Uncharacterised protein family ApaG Thimo_3263 IPR036767 Thimo_3263 Thimo_3265 IPR000683 Oxidoreductase, N-terminal Thimo_3265 IPR036291 Thimo_3265 Thimo_3266 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type Thimo_3266 IPR015391 SurA N-terminal Thimo_3266 IPR023034 Peptidyl-prolyl isomerase SurA Thimo_3266 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Thimo_3266 IPR027304 Trigger factor/SurA domain Thimo_3267 IPR007543 Organic solvent tolerance protein, C-terminal Thimo_3267 IPR020889 Lipopolysaccharide assembly, LptD Thimo_3268 IPR010918 AIR synthase-related protein, C-terminal domain Thimo_3268 IPR011854 Hydrogenase expression/formation protein HypE Thimo_3268 IPR016188 PurM, N-terminal-like Thimo_3268 IPR036676 Thimo_3268 Thimo_3268 IPR036921 Thimo_3268 Thimo_3269 IPR002780 Hydrogenase formation HypD protein Thimo_3270 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Thimo_3270 IPR019812 Hydrogenase assembly chaperone, conserved site Thimo_3270 IPR037254 Thimo_3270 Thimo_3271 IPR029014 NiFe hydrogenase-like Thimo_3272 IPR007848 Methyltransferase small domain Thimo_3272 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3273 IPR011990 Tetratricopeptide-like helical domain Thimo_3273 IPR019734 Tetratricopeptide repeat Thimo_3274 IPR001653 Diaminopimelate epimerase, DapF Thimo_3274 IPR018510 Diaminopimelate epimerase, active site Thimo_3275 IPR007435 Protein of unknown function DUF484 Thimo_3275 IPR029016 GAF domain-like Thimo_3276 IPR002104 Integrase, catalytic Thimo_3276 IPR004107 Integrase, SAM-like, N-terminal Thimo_3276 IPR010998 Integrase, Lambda-type, N-terminal Thimo_3276 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_3276 IPR011931 Tyrosine recombinase XerC Thimo_3276 IPR013762 Integrase-like, catalytic core Thimo_3276 IPR023009 Tyrosine recombinase XerC/XerD Thimo_3277 IPR019286 Protein of unknown function DUF2339, transmembrane Thimo_3278 IPR001353 Proteasome, subunit alpha/beta Thimo_3278 IPR022281 ATP-dependent protease, HslV subunit Thimo_3278 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_3279 IPR003593 AAA+ ATPase domain Thimo_3279 IPR003959 ATPase, AAA-type, core Thimo_3279 IPR004491 Heat shock protein HslU Thimo_3279 IPR019489 Clp ATPase, C-terminal Thimo_3279 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3280 IPR013216 Methyltransferase type 11 Thimo_3280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3281 IPR010376 Domain of unknown function, DUF971 Thimo_3281 IPR038492 Thimo_3281 Thimo_3283 IPR004636 Acetylornithine/Succinylornithine transaminase family Thimo_3283 IPR005814 Aminotransferase class-III Thimo_3283 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_3283 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_3283 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_3284 IPR002292 Ornithine/putrescine carbamoyltransferase Thimo_3284 IPR006130 Aspartate/ornithine carbamoyltransferase Thimo_3284 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain Thimo_3284 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding Thimo_3284 IPR024904 Ornithine carbamoyltransferase Thimo_3284 IPR036901 Thimo_3284 Thimo_3285 IPR035173 Thimo_3285 Thimo_3286 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit Thimo_3286 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_3286 IPR016174 Di-haem cytochrome, transmembrane Thimo_3287 IPR024673 Octaheme c-type cytochrome Thimo_3287 IPR036280 Thimo_3287 Thimo_3288 IPR011701 Major facilitator superfamily Thimo_3288 IPR036259 Thimo_3288 Thimo_3289 IPR016040 NAD(P)-binding domain Thimo_3289 IPR021295 Protein of unknown function DUF2867 Thimo_3289 IPR023393 START-like domain Thimo_3289 IPR036291 Thimo_3289 Thimo_3290 IPR005122 Uracil-DNA glycosylase-like Thimo_3290 IPR026353 Hypoxanthine-DNA glycosylase Thimo_3290 IPR036895 Thimo_3290 Thimo_3291 IPR036680 Thimo_3291 Thimo_3292 IPR002347 Glucose/ribitol dehydrogenase Thimo_3292 IPR020904 Short-chain dehydrogenase/reductase, conserved site Thimo_3292 IPR036291 Thimo_3292 Thimo_3293 IPR011006 CheY-like superfamily Thimo_3295 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3295 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3295 IPR036097 Thimo_3295 Thimo_3295 IPR036890 Thimo_3295 Thimo_3296 IPR000014 PAS domain Thimo_3296 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3296 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3296 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3296 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR Thimo_3296 IPR021766 Protein of unknown function DUF3329 Thimo_3296 IPR035965 Thimo_3296 Thimo_3296 IPR036097 Thimo_3296 Thimo_3296 IPR036890 Thimo_3296 Thimo_3297 IPR001789 Signal transduction response regulator, receiver domain Thimo_3297 IPR001867 Signal transduction response regulator, C-terminal Thimo_3297 IPR011006 CheY-like superfamily Thimo_3297 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB Thimo_3297 IPR036388 Thimo_3297 Thimo_3298 IPR001279 Beta-lactamase-like Thimo_3298 IPR036866 Thimo_3298 Thimo_3299 IPR000086 NUDIX hydrolase domain Thimo_3299 IPR015797 NUDIX hydrolase domain-like Thimo_3299 IPR020084 NUDIX hydrolase, conserved site Thimo_3299 IPR020476 NUDIX hydrolase Thimo_3300 IPR003808 Fe-S metabolism associated domain, SufE-like Thimo_3301 IPR000361 FeS cluster biogenesis Thimo_3301 IPR016092 FeS cluster insertion protein Thimo_3301 IPR017870 FeS cluster insertion, C-terminal, conserved site Thimo_3301 IPR035903 Thimo_3301 Thimo_3302 IPR007156 LemA Thimo_3302 IPR023353 LemA-like domain Thimo_3303 IPR022170 Mitochondrial ubiquitin ligase activator of NFKB 1 Thimo_3304 IPR000014 PAS domain Thimo_3304 IPR000160 GGDEF domain Thimo_3304 IPR001610 PAC motif Thimo_3304 IPR013655 PAS fold-3 Thimo_3304 IPR029787 Nucleotide cyclase Thimo_3304 IPR035965 Thimo_3304 Thimo_3310 IPR000073 Alpha/beta hydrolase fold-1 Thimo_3310 IPR029058 Alpha/Beta hydrolase fold Thimo_3311 IPR004561 Isochorismate synthase Thimo_3311 IPR005801 ADC synthase Thimo_3311 IPR015890 Chorismate binding, C-terminal Thimo_3312 IPR004433 Menaquinone biosynthesis protein MenD Thimo_3312 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thimo_3312 IPR029035 DHS-like NAD/FAD-binding domain Thimo_3312 IPR029061 Thiamin diphosphate-binding fold Thimo_3312 IPR032264 Thimo_3312 Thimo_3313 IPR001753 Crotonase superfamily Thimo_3313 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase Thimo_3313 IPR014748 Crontonase, C-terminal Thimo_3313 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site Thimo_3313 IPR029045 ClpP/crotonase-like domain Thimo_3314 IPR000537 UbiA prenyltransferase family Thimo_3314 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase Thimo_3314 IPR026046 UbiA prenyltransferase domain containing protein 1 Thimo_3315 IPR010196 O-succinylbenzoic acid (OSB) synthetase Thimo_3315 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Thimo_3315 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Thimo_3315 IPR029017 Enolase N-terminal domain-like Thimo_3315 IPR029065 Enolase C-terminal domain-like Thimo_3315 IPR036849 Thimo_3315 Thimo_3316 IPR029069 HotDog domain Thimo_3317 IPR003385 Glycoside hydrolase, family 77 Thimo_3317 IPR017853 Glycoside hydrolase, superfamily Thimo_3318 IPR005835 Nucleotidyl transferase Thimo_3318 IPR005836 ADP-glucose pyrophosphorylase, conserved site Thimo_3318 IPR011004 Trimeric LpxA-like Thimo_3318 IPR011831 Glucose-1-phosphate adenylyltransferase Thimo_3318 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Thimo_3318 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3319 IPR004193 Glycoside hydrolase, family 13, N-terminal Thimo_3319 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_3319 IPR006048 Alpha-amylase, C-terminal all beta Thimo_3319 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB Thimo_3319 IPR013780 Glycosyl hydrolase, family 13, all-beta Thimo_3319 IPR013783 Immunoglobulin-like fold Thimo_3319 IPR014756 Immunoglobulin E-set Thimo_3319 IPR017853 Glycoside hydrolase, superfamily Thimo_3319 IPR037439 Thimo_3319 Thimo_3320 IPR002059 Cold-shock protein, DNA-binding Thimo_3320 IPR011129 Cold shock protein Thimo_3320 IPR012156 Cold shock, CspA Thimo_3320 IPR012340 Nucleic acid-binding, OB-fold Thimo_3320 IPR019844 Cold-shock conserved site Thimo_3321 IPR001107 Band 7 protein Thimo_3321 IPR001972 Stomatin family Thimo_3321 IPR036013 Thimo_3321 Thimo_3322 IPR002810 NfeD-like, C-terminal domain Thimo_3322 IPR029045 ClpP/crotonase-like domain Thimo_3323 IPR003448 Molybdopterin biosynthesis MoaE Thimo_3323 IPR036563 Thimo_3323 Thimo_3324 IPR005801 ADC synthase Thimo_3324 IPR005802 Para-aminobenzoate synthase, component I Thimo_3324 IPR006805 Anthranilate synthase component I, N-terminal Thimo_3324 IPR015890 Chorismate binding, C-terminal Thimo_3324 IPR019999 Anthranilate synthase component I - like Thimo_3326 IPR000121 PEP-utilising enzyme, C-terminal Thimo_3326 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding Thimo_3326 IPR008279 PEP-utilising enzyme, mobile domain Thimo_3326 IPR010121 Pyruvate, phosphate dikinase Thimo_3326 IPR013815 ATP-grasp fold, subdomain 1 Thimo_3326 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_3326 IPR018274 PEP-utilising enzyme, active site Thimo_3326 IPR036637 Thimo_3326 Thimo_3328 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Thimo_3328 IPR002300 Aminoacyl-tRNA synthetase, class Ia Thimo_3328 IPR002303 Valine-tRNA ligase Thimo_3328 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain Thimo_3328 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding Thimo_3328 IPR010978 tRNA-binding arm Thimo_3328 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding Thimo_3328 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3328 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm Thimo_3328 IPR037118 Thimo_3328 Thimo_3329 IPR000595 Cyclic nucleotide-binding domain Thimo_3329 IPR012318 Helix-turn-helix motif, Crp-type Thimo_3329 IPR014710 RmlC-like jelly roll fold Thimo_3329 IPR018490 Cyclic nucleotide-binding-like Thimo_3329 IPR036388 Thimo_3329 Thimo_3329 IPR036390 Thimo_3329 Thimo_3330 IPR021309 Protein of unknown function DUF2892 Thimo_3331 IPR007428 VacJ-like lipoprotein Thimo_3332 IPR005987 Ribonuclease T Thimo_3332 IPR012337 Ribonuclease H-like domain Thimo_3332 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_3332 IPR036397 Thimo_3332 Thimo_3333 IPR002109 Glutaredoxin Thimo_3333 IPR004480 Monothiol glutaredoxin-related Thimo_3333 IPR014434 Monothiol glutaredoxin Thimo_3333 IPR036249 Thimo_3333 Thimo_3334 IPR001962 Asparagine synthase Thimo_3334 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thimo_3334 IPR017535 Asparagine synthase family amidotransferase Thimo_3334 IPR017932 Glutamine amidotransferase type 2 domain Thimo_3334 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_3336 IPR003692 Hydantoinase B/oxoprolinase Thimo_3337 IPR001189 Manganese/iron superoxide dismutase Thimo_3337 IPR019831 Manganese/iron superoxide dismutase, N-terminal Thimo_3337 IPR019832 Manganese/iron superoxide dismutase, C-terminal Thimo_3337 IPR019833 Manganese/iron superoxide dismutase, binding site Thimo_3337 IPR036314 Thimo_3337 Thimo_3337 IPR036324 Thimo_3337 Thimo_3338 IPR010290 Transmembrane secretion effector Thimo_3338 IPR036259 Thimo_3338 Thimo_3339 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal Thimo_3339 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal Thimo_3339 IPR020871 Ribulose bisphosphate carboxylase Thimo_3339 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site Thimo_3339 IPR036376 Thimo_3339 Thimo_3339 IPR036422 Thimo_3339 Thimo_3340 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_3340 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thimo_3340 IPR029014 NiFe hydrogenase-like Thimo_3341 IPR004017 Cysteine-rich domain Thimo_3341 IPR009051 Alpha-helical ferredoxin Thimo_3341 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_3341 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3342 IPR036197 Thimo_3342 Thimo_3343 IPR001821 [NiFe]-hydrogenase, small subunit Thimo_3343 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_3343 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Thimo_3343 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Thimo_3343 IPR037024 Thimo_3343 Thimo_3343 IPR037148 Thimo_3343 Thimo_3344 IPR006894 HupH hydrogenase expression protein, C-terminal Thimo_3344 IPR038527 Thimo_3344 Thimo_3345 IPR018551 Domain of unknown function DUF2007 Thimo_3346 IPR002035 von Willebrand factor, type A Thimo_3346 IPR028274 TerY-C metal binding domain Thimo_3346 IPR036465 Thimo_3346 Thimo_3348 IPR013216 Methyltransferase type 11 Thimo_3348 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3351 IPR002559 Transposase, IS4-like Thimo_3351 IPR012337 Ribonuclease H-like domain Thimo_3352 IPR009057 Homeodomain-like Thimo_3352 IPR012337 Ribonuclease H-like domain Thimo_3352 IPR025959 Winged helix-turn helix domain Thimo_3352 IPR038717 Thimo_3352 Thimo_3356 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_3356 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3357 IPR001135 NADH-quinone oxidoreductase, subunit D Thimo_3357 IPR001501 Nickel-dependent hydrogenase, large subunit Thimo_3357 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site Thimo_3357 IPR029014 NiFe hydrogenase-like Thimo_3357 IPR038290 Thimo_3357 Thimo_3358 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit Thimo_3358 IPR037232 Thimo_3358 Thimo_3359 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit Thimo_3360 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Thimo_3361 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal Thimo_3361 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase Thimo_3362 IPR005122 Uracil-DNA glycosylase-like Thimo_3362 IPR005273 Uracil-DNA glycosylase, family 4 domain Thimo_3362 IPR036895 Thimo_3362 Thimo_3363 IPR000891 Pyruvate carboxyltransferase Thimo_3363 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site Thimo_3363 IPR005671 2-isopropylmalate synthase, bacterial-type Thimo_3363 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain Thimo_3363 IPR013785 Aldolase-type TIM barrel Thimo_3363 IPR036230 Thimo_3363 Thimo_3364 IPR000847 Transcription regulator HTH, LysR Thimo_3364 IPR005119 LysR, substrate-binding Thimo_3364 IPR036388 Thimo_3364 Thimo_3364 IPR036390 Thimo_3364 Thimo_3365 IPR007453 Sulphur transfer protein DsrC/TusE Thimo_3365 IPR025526 DsrC-like domain Thimo_3366 IPR000644 CBS domain Thimo_3367 IPR007065 HPP Thimo_3368 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase Thimo_3368 IPR010048 Hydroxylamine reductase Thimo_3368 IPR011254 Prismane-like Thimo_3368 IPR016099 Prismane-like, alpha/beta-sandwich Thimo_3368 IPR016100 Prismane, alpha-bundle Thimo_3369 IPR000595 Cyclic nucleotide-binding domain Thimo_3369 IPR012318 Helix-turn-helix motif, Crp-type Thimo_3369 IPR014710 RmlC-like jelly roll fold Thimo_3369 IPR018490 Cyclic nucleotide-binding-like Thimo_3369 IPR036388 Thimo_3369 Thimo_3369 IPR036390 Thimo_3369 Thimo_3370 IPR001633 EAL domain Thimo_3370 IPR035919 Thimo_3370 Thimo_3372 IPR002740 EVE domain Thimo_3372 IPR015947 PUA-like domain Thimo_3373 IPR005835 Nucleotidyl transferase Thimo_3373 IPR005836 ADP-glucose pyrophosphorylase, conserved site Thimo_3373 IPR011004 Trimeric LpxA-like Thimo_3373 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial Thimo_3373 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3374 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Thimo_3374 IPR006124 Metalloenzyme Thimo_3374 IPR011258 BPG-independent PGAM, N-terminal Thimo_3374 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha Thimo_3374 IPR017850 Alkaline-phosphatase-like, core domain Thimo_3374 IPR036646 Thimo_3374 Thimo_3375 IPR000398 Thymidylate synthase Thimo_3375 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain Thimo_3375 IPR036926 Thimo_3375 Thimo_3376 IPR002898 MotA/TolQ/ExbB proton channel Thimo_3377 IPR003400 Biopolymer transport protein ExbD/TolR Thimo_3378 IPR003439 ABC transporter-like Thimo_3378 IPR003593 AAA+ ATPase domain Thimo_3378 IPR011527 ABC transporter type 1, transmembrane domain Thimo_3378 IPR011917 ABC transporter, lipid A export, MsbA Thimo_3378 IPR017871 ABC transporter, conserved site Thimo_3378 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3378 IPR036640 Thimo_3378 Thimo_3379 IPR003758 Tetraacyldisaccharide 4'-kinase Thimo_3379 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3380 IPR005651 Uncharacterised protein family UPF0434/Trm112 Thimo_3380 IPR038053 Thimo_3380 Thimo_3381 IPR003329 Acylneuraminate cytidylyltransferase Thimo_3381 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase Thimo_3381 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3383 IPR006153 Cation/H+ exchanger Thimo_3384 IPR003684 Porin, alpha proteobacteria type Thimo_3391 IPR000551 MerR-type HTH domain Thimo_3391 IPR009061 DNA binding domain, putative Thimo_3391 IPR015358 Transcription regulator MerR, DNA binding Thimo_3392 IPR001757 Cation-transporting P-type ATPase Thimo_3392 IPR006121 Heavy metal-associated domain, HMA Thimo_3392 IPR006122 Heavy metal-associated domain, copper ion-binding Thimo_3392 IPR008250 P-type ATPase, A domain Thimo_3392 IPR017969 Heavy-metal-associated, conserved site Thimo_3392 IPR018303 P-type ATPase, phosphorylation site Thimo_3392 IPR023214 HAD-like domain Thimo_3392 IPR023298 P-type ATPase, transmembrane domain Thimo_3392 IPR023299 P-type ATPase, cytoplasmic domain N Thimo_3392 IPR027256 Cation-transporting P-type ATPase, subfamily IB Thimo_3392 IPR036163 Thimo_3392 Thimo_3392 IPR036412 Thimo_3392 Thimo_3393 IPR006121 Heavy metal-associated domain, HMA Thimo_3393 IPR017969 Heavy-metal-associated, conserved site Thimo_3393 IPR036163 Thimo_3393 Thimo_3395 IPR012899 LTXXQ motif family protein Thimo_3397 IPR001204 Phosphate transporter Thimo_3398 IPR002646 Poly A polymerase, head domain Thimo_3398 IPR003607 HD/PDEase domain Thimo_3398 IPR006674 HD domain Thimo_3398 IPR012006 tRNA nucleotidyltransferase, proteobacteria Thimo_3398 IPR032828 Thimo_3398 Thimo_3399 IPR025196 Domain of unknown function DUF4126 Thimo_3400 IPR021330 Protein of unknown function DUF2939 Thimo_3401 IPR011051 RmlC-like cupin domain Thimo_3401 IPR013096 Cupin 2, conserved barrel Thimo_3401 IPR014710 RmlC-like jelly roll fold Thimo_3402 IPR000014 PAS domain Thimo_3402 IPR001610 PAC motif Thimo_3402 IPR001789 Signal transduction response regulator, receiver domain Thimo_3402 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3402 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3402 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3402 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain Thimo_3402 IPR011006 CheY-like superfamily Thimo_3402 IPR013656 PAS fold-4 Thimo_3402 IPR013767 PAS fold Thimo_3402 IPR035965 Thimo_3402 Thimo_3402 IPR036097 Thimo_3402 Thimo_3402 IPR036641 Thimo_3402 Thimo_3402 IPR036890 Thimo_3402 Thimo_3403 IPR000160 GGDEF domain Thimo_3403 IPR029787 Nucleotide cyclase Thimo_3404 IPR008325 Uncharacterised conserved protein UCP033924 Thimo_3405 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site Thimo_3405 IPR004839 Aminotransferase, class I/classII Thimo_3405 IPR005860 L-threonine-O-3-phosphate decarboxylase Thimo_3405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_3405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_3405 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_3406 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_3406 IPR004459 Cobyric acid synthase CobQ Thimo_3406 IPR011698 CobB/CobQ-like glutamine amidotransferase Thimo_3406 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3406 IPR029062 Class I glutamine amidotransferase-like Thimo_3407 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like Thimo_3407 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic Thimo_3407 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal Thimo_3407 IPR036087 Thimo_3407 Thimo_3409 IPR006935 Helicase/UvrB domain Thimo_3409 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3410 IPR019239 Protein of unknown function DUF2191 Thimo_3411 IPR010985 Ribbon-helix-helix Thimo_3412 IPR002716 PIN domain Thimo_3412 IPR022907 VapC family Thimo_3412 IPR029060 PIN domain-like Thimo_3413 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class Thimo_3413 IPR002941 DNA methylase N-4/N-6 Thimo_3413 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3414 IPR002934 Nucleotidyl transferase domain Thimo_3415 IPR007842 HEPN Thimo_3416 IPR014017 DNA helicase, UvrD-like, C-terminal Thimo_3416 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3416 IPR035093 Thimo_3416 Thimo_3420 IPR001915 Peptidase M48 Thimo_3420 IPR022919 Peptidase M48, protease HtpX, putative Thimo_3421 IPR036909 Thimo_3421 Thimo_3422 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal Thimo_3422 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal Thimo_3422 IPR012132 Glucose-methanol-choline oxidoreductase Thimo_3422 IPR036188 Thimo_3422 Thimo_3423 IPR036909 Thimo_3423 Thimo_3424 IPR002641 Patatin/Phospholipase A2-related Thimo_3424 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_3426 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3426 IPR003660 HAMP linker domain Thimo_3426 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3426 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3426 IPR036097 Thimo_3426 Thimo_3426 IPR036890 Thimo_3426 Thimo_3427 IPR001789 Signal transduction response regulator, receiver domain Thimo_3427 IPR001867 Signal transduction response regulator, C-terminal Thimo_3427 IPR011006 CheY-like superfamily Thimo_3427 IPR016032 Signal transduction response regulator, C-terminal effector Thimo_3427 IPR036388 Thimo_3427 Thimo_3430 IPR003439 ABC transporter-like Thimo_3430 IPR003593 AAA+ ATPase domain Thimo_3430 IPR008995 Molybdate/tungstate binding, C-terminal Thimo_3430 IPR013611 Transport-associated OB, type 2 Thimo_3430 IPR017871 ABC transporter, conserved site Thimo_3430 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3431 IPR000515 MetI-like domain Thimo_3431 IPR035906 Thimo_3431 Thimo_3432 IPR000515 MetI-like domain Thimo_3432 IPR035906 Thimo_3432 Thimo_3433 IPR006059 Bacterial extracellular solute-binding, family 1 Thimo_3434 IPR011990 Tetratricopeptide-like helical domain Thimo_3436 IPR005814 Aminotransferase class-III Thimo_3436 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA Thimo_3436 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_3436 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_3436 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_3437 IPR001296 Glycosyl transferase, family 1 Thimo_3437 IPR011835 Glycogen/starch synthase, ADP-glucose type Thimo_3437 IPR013534 Starch synthase, catalytic domain Thimo_3438 IPR006047 Glycosyl hydrolase, family 13, catalytic domain Thimo_3438 IPR017853 Glycoside hydrolase, superfamily Thimo_3438 IPR032792 Thimo_3438 Thimo_3440 IPR000183 Ornithine/DAP/Arg decarboxylase Thimo_3440 IPR002986 Diaminopimelate decarboxylase, LysA Thimo_3440 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Thimo_3440 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal Thimo_3440 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Thimo_3440 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Thimo_3440 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Thimo_3440 IPR029066 PLP-binding barrel Thimo_3441 IPR013217 Methyltransferase type 12 Thimo_3441 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3442 IPR004808 AP endonuclease 1 Thimo_3442 IPR005135 Endonuclease/exonuclease/phosphatase Thimo_3442 IPR020847 AP endonuclease 1, binding site Thimo_3442 IPR036691 Thimo_3442 Thimo_3443 IPR005839 Methylthiotransferase Thimo_3443 IPR006467 MiaB-like tRNA modifying enzyme Thimo_3443 IPR006638 Elongator protein 3/MiaB/NifB Thimo_3443 IPR007197 Radical SAM Thimo_3443 IPR013848 Methylthiotransferase, N-terminal Thimo_3443 IPR020612 Methylthiotransferase, conserved site Thimo_3443 IPR023404 Radical SAM, alpha/beta horseshoe Thimo_3443 IPR038135 Thimo_3443 Thimo_3444 IPR008978 HSP20-like chaperone Thimo_3445 IPR000845 Nucleoside phosphorylase domain Thimo_3445 IPR035994 Thimo_3445 Thimo_3446 IPR020358 Uncharacterised protein family Y4oB Thimo_3446 IPR024467 Domain of unknown function DUF2384 Thimo_3447 IPR014914 RES Thimo_3449 IPR010985 Ribbon-helix-helix Thimo_3449 IPR014795 Vibrio phage ICP1, Orf50 Thimo_3450 IPR000182 GNAT domain Thimo_3450 IPR016181 Acyl-CoA N-acyltransferase Thimo_3451 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_3451 IPR003356 DNA methylase, adenine-specific Thimo_3451 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Thimo_3451 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3451 IPR038333 Thimo_3451 Thimo_3452 IPR000055 Restriction endonuclease, type I, HsdS Thimo_3454 IPR007711 Plasmid maintenance system killer Thimo_3454 IPR035093 Thimo_3454 Thimo_3455 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_3455 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3455 IPR013430 Toxin-antitoxin system, antidote protein, HigA Thimo_3456 IPR010359 Protein of unknown function DUF955 Thimo_3456 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3457 IPR016541 Uncharacterised conserved protein UCP008505 Thimo_3459 IPR001387 Cro/C1-type helix-turn-helix domain Thimo_3459 IPR010982 Lambda repressor-like, DNA-binding domain Thimo_3459 IPR014057 Addiction module antidote protein, HI1420 Thimo_3461 IPR006935 Helicase/UvrB domain Thimo_3461 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal Thimo_3461 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Thimo_3461 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3463 IPR016192 APOBEC/CMP deaminase, zinc-binding Thimo_3463 IPR016193 Cytidine deaminase-like Thimo_3463 IPR028883 tRNA-specific adenosine deaminase Thimo_3464 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Thimo_3464 IPR030395 Thimo_3464 Thimo_3465 IPR005144 ATP-cone Thimo_3465 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic Thimo_3466 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic Thimo_3468 IPR007197 Radical SAM Thimo_3468 IPR012840 Ribonucleoside-triphosphate reductase, anaerobic-like Thimo_3468 IPR013785 Aldolase-type TIM barrel Thimo_3469 IPR004276 Glycosyl transferase, family 28 Thimo_3471 IPR011990 Tetratricopeptide-like helical domain Thimo_3471 IPR019734 Tetratricopeptide repeat Thimo_3472 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3473 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_3473 IPR003356 DNA methylase, adenine-specific Thimo_3473 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3475 IPR014914 RES Thimo_3476 IPR024467 Domain of unknown function DUF2384 Thimo_3477 IPR007421 ATPase, AAA-4 Thimo_3477 IPR038461 Thimo_3477 Thimo_3479 IPR003423 Outer membrane efflux protein Thimo_3480 IPR006143 RND efflux pump, membrane fusion protein Thimo_3481 IPR001036 Acriflavin resistance protein Thimo_3481 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Thimo_3482 IPR008309 Uncharacterised conserved protein UCP025560 Thimo_3483 IPR025985 YnbE-like lipoprotein Thimo_3484 IPR021730 Dicarboxylate transport Thimo_3486 IPR013216 Methyltransferase type 11 Thimo_3486 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3487 IPR001173 Glycosyltransferase 2-like Thimo_3487 IPR007267 GtrA-like protein Thimo_3487 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3488 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3489 IPR013216 Methyltransferase type 11 Thimo_3489 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3490 IPR002293 Amino acid/polyamine transporter I Thimo_3491 IPR003646 SH3-like domain, bacterial-type Thimo_3491 IPR016476 SH3 domain protein Thimo_3492 IPR001029 Flagellin, D0/D1 domain Thimo_3492 IPR013384 Flagellar hook-associated protein 3 Thimo_3493 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3493 IPR002371 Flagellar hook-associated protein, FlgK Thimo_3493 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thimo_3494 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain Thimo_3494 IPR013377 Flagellar rod assembly protein/muramidase FlgJ Thimo_3494 IPR019301 Flagellar protein FlgJ, N-terminal Thimo_3495 IPR001782 Flagellar P-ring protein Thimo_3496 IPR000527 Flagellar L-ring protein Thimo_3497 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3497 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thimo_3497 IPR012834 Flagellar basal-body rod FlgG Thimo_3497 IPR019776 Flagellar basal body rod protein, conserved site Thimo_3497 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Thimo_3497 IPR037925 Thimo_3497 Thimo_3498 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3498 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thimo_3498 IPR012836 Flagellar basal-body rod FlgF Thimo_3498 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Thimo_3498 IPR037925 Thimo_3498 Thimo_3499 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3499 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thimo_3499 IPR011491 Flagellar basal body FlaE Thimo_3499 IPR020013 Fagellar hook-basal body protein, FlgE/F/G Thimo_3499 IPR037058 Thimo_3499 Thimo_3499 IPR037925 Thimo_3499 Thimo_3500 IPR005648 Flagellar hook capping protein Thimo_3500 IPR025963 FlgD Tudor-like domain Thimo_3500 IPR025965 FlgD Ig-like domain Thimo_3501 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3501 IPR006299 Flagellar basal-body rod protein FlgC Thimo_3501 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Thimo_3501 IPR019776 Flagellar basal body rod protein, conserved site Thimo_3502 IPR001444 Flagellar basal body rod protein, N-terminal Thimo_3502 IPR006300 Flagellar basal-body rod protein FlgB Thimo_3504 IPR032816 Thimo_3504 Thimo_3505 IPR011697 Peptidase C26 Thimo_3505 IPR029062 Class I glutamine amidotransferase-like Thimo_3506 IPR022025 Putative amidoligase enzyme Thimo_3510 IPR002646 Poly A polymerase, head domain Thimo_3510 IPR010206 Poly(A) polymerase I Thimo_3510 IPR025866 Polymerase A arginine-rich C-terminal domain Thimo_3510 IPR032828 Thimo_3510 Thimo_3511 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK Thimo_3511 IPR035907 Thimo_3511 Thimo_3512 IPR003700 Ketopantoate hydroxymethyltransferase Thimo_3512 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_3513 IPR003721 Pantoate-beta-alanine ligase Thimo_3513 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3514 IPR003190 Aspartate decarboxylase Thimo_3514 IPR009010 Aspartate decarboxylase-like domain Thimo_3515 IPR001296 Glycosyl transferase, family 1 Thimo_3515 IPR011835 Glycogen/starch synthase, ADP-glucose type Thimo_3515 IPR013534 Starch synthase, catalytic domain Thimo_3516 IPR001282 Glucose-6-phosphate dehydrogenase Thimo_3516 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding Thimo_3516 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal Thimo_3516 IPR036291 Thimo_3516 Thimo_3517 IPR001672 Phosphoglucose isomerase (PGI) Thimo_3517 IPR018189 Phosphoglucose isomerase, conserved site Thimo_3517 IPR023096 Phosphoglucose isomerase, C-terminal Thimo_3518 IPR010650 PrkA C-terminal domain Thimo_3518 IPR013153 PrkA AAA domain Thimo_3518 IPR016230 Serine-protein kinase, PrkA Thimo_3518 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3519 IPR006698 Thermus phage phiYS40, Orf56 Thimo_3519 IPR036465 Thimo_3519 Thimo_3520 IPR007390 Sporulation stage V, protein R Thimo_3521 IPR002477 Peptidoglycan binding-like Thimo_3521 IPR005490 L,D-transpeptidase catalytic domain Thimo_3521 IPR036365 Thimo_3521 Thimo_3521 IPR038063 Thimo_3521 Thimo_3522 IPR021109 Aspartic peptidase domain Thimo_3523 IPR003841 Sodium-dependent phosphate transport protein Thimo_3524 IPR002575 Aminoglycoside phosphotransferase Thimo_3524 IPR011009 Protein kinase-like domain Thimo_3525 IPR008538 Domain of unknown function DUF820 Thimo_3525 IPR011335 Restriction endonuclease type II-like Thimo_3526 IPR036568 Thimo_3526 Thimo_3527 IPR002104 Integrase, catalytic Thimo_3527 IPR004107 Integrase, SAM-like, N-terminal Thimo_3527 IPR010998 Integrase, Lambda-type, N-terminal Thimo_3527 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_3527 IPR011946 Integrase, integron-type Thimo_3527 IPR013762 Integrase-like, catalytic core Thimo_3528 IPR025285 Domain of unknown function DUF4145 Thimo_3530 IPR001584 Integrase, catalytic core Thimo_3530 IPR009057 Homeodomain-like Thimo_3530 IPR012337 Ribonuclease H-like domain Thimo_3530 IPR036397 Thimo_3530 Thimo_3531 IPR002514 Transposase IS3/IS911family Thimo_3531 IPR009057 Homeodomain-like Thimo_3539 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_3539 IPR016174 Di-haem cytochrome, transmembrane Thimo_3540 IPR018588 Dihaem cytochrome c Thimo_3541 IPR007774 Putative nitrogen fixation protein Thimo_3541 IPR029012 Helix hairpin bin domain Thimo_3542 IPR000644 CBS domain Thimo_3542 IPR002550 Domain of unknown function DUF21 Thimo_3543 IPR002791 Domain of unknown function DUF89 Thimo_3543 IPR014444 Uncharacterised conserved protein UCP006593 Thimo_3543 IPR036075 Thimo_3543 Thimo_3545 IPR000763 Catalase-peroxidase haem Thimo_3545 IPR002016 Haem peroxidase, plant/fungal/bacterial Thimo_3545 IPR010255 Haem peroxidase Thimo_3545 IPR019794 Peroxidase, active site Thimo_3546 IPR012312 Haemerythrin/HHE cation-binding motif Thimo_3546 IPR012827 Haemerythrin-like, metal-binding domain Thimo_3546 IPR016131 Haemerythrin, iron-binding site Thimo_3546 IPR035938 Thimo_3546 Thimo_3549 IPR002641 Patatin/Phospholipase A2-related Thimo_3549 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Thimo_3549 IPR024282 Domain of unknown function DUF3376 Thimo_3550 IPR000878 Tetrapyrrole methylase Thimo_3550 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site Thimo_3550 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase Thimo_3550 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_3550 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_3550 IPR035996 Thimo_3550 Thimo_3551 IPR002750 CobE/GbiG C-terminal domain Thimo_3551 IPR036518 Thimo_3551 Thimo_3552 IPR000878 Tetrapyrrole methylase Thimo_3552 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase Thimo_3552 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase Thimo_3552 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit Thimo_3552 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_3552 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3552 IPR035996 Thimo_3552 Thimo_3553 IPR003723 Precorrin-6x reductase Thimo_3554 IPR000878 Tetrapyrrole methylase Thimo_3554 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core Thimo_3554 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_3554 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_3554 IPR035996 Thimo_3554 Thimo_3555 IPR000878 Tetrapyrrole methylase Thimo_3555 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core Thimo_3555 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase Thimo_3555 IPR014776 Tetrapyrrole methylase, subdomain 2 Thimo_3555 IPR014777 Tetrapyrrole methylase, subdomain 1 Thimo_3555 IPR035996 Thimo_3555 Thimo_3556 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase Thimo_3556 IPR036588 Thimo_3556 Thimo_3557 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3557 IPR003660 HAMP linker domain Thimo_3557 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3557 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3557 IPR036097 Thimo_3557 Thimo_3557 IPR036890 Thimo_3557 Thimo_3558 IPR001789 Signal transduction response regulator, receiver domain Thimo_3558 IPR001867 Signal transduction response regulator, C-terminal Thimo_3558 IPR011006 CheY-like superfamily Thimo_3558 IPR036388 Thimo_3558 Thimo_3559 IPR021236 Uncharacterised protein family YfdX Thimo_3560 IPR013078 Histidine phosphatase superfamily, clade-1 Thimo_3560 IPR029033 Histidine phosphatase superfamily Thimo_3562 IPR000572 Oxidoreductase, molybdopterin-binding domain Thimo_3562 IPR036374 Thimo_3562 Thimo_3563 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase Thimo_3563 IPR016174 Di-haem cytochrome, transmembrane Thimo_3564 IPR003817 Phosphatidylserine decarboxylase-related Thimo_3565 IPR005490 L,D-transpeptidase catalytic domain Thimo_3565 IPR038063 Thimo_3565 Thimo_3566 IPR016181 Acyl-CoA N-acyltransferase Thimo_3566 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Thimo_3566 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 Thimo_3568 IPR000816 Peptidase C15, pyroglutamyl peptidase I Thimo_3568 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like Thimo_3568 IPR029762 Pyroglutamyl peptidase I, bacterial-type Thimo_3568 IPR033693 Thimo_3568 Thimo_3568 IPR036440 Thimo_3568 Thimo_3569 IPR039498 Thimo_3569 Thimo_3571 IPR032708 Thimo_3571 Thimo_3572 IPR008792 Coenzyme PQQ synthesis D Thimo_3573 IPR003439 ABC transporter-like Thimo_3573 IPR003593 AAA+ ATPase domain Thimo_3573 IPR017871 ABC transporter, conserved site Thimo_3573 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3573 IPR036640 Thimo_3573 Thimo_3574 IPR007803 Arginine/Asparagine/Proline hydroxylase Thimo_3574 IPR027443 Isopenicillin N synthase-like Thimo_3575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3576 IPR008775 Phytanoyl-CoA dioxygenase Thimo_3577 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3584 IPR011083 Phage tail collar domain Thimo_3584 IPR037053 Thimo_3584 Thimo_3585 IPR011083 Phage tail collar domain Thimo_3585 IPR037053 Thimo_3585 Thimo_3586 IPR011083 Phage tail collar domain Thimo_3586 IPR037053 Thimo_3586 Thimo_3587 IPR006638 Elongator protein 3/MiaB/NifB Thimo_3587 IPR007197 Radical SAM Thimo_3587 IPR013785 Aldolase-type TIM barrel Thimo_3587 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3589 IPR001962 Asparagine synthase Thimo_3589 IPR006426 Asparagine synthase, glutamine-hydrolyzing Thimo_3589 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3589 IPR017932 Glutamine amidotransferase type 2 domain Thimo_3589 IPR029055 Nucleophile aminohydrolases, N-terminal Thimo_3591 IPR000863 Sulfotransferase domain Thimo_3591 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3592 IPR000182 GNAT domain Thimo_3592 IPR016181 Acyl-CoA N-acyltransferase Thimo_3593 IPR008775 Phytanoyl-CoA dioxygenase Thimo_3596 IPR007024 BLUF domain Thimo_3596 IPR020948 Phosphate-starvation-induced PsiE-like Thimo_3596 IPR036046 Thimo_3596 Thimo_3597 IPR001279 Beta-lactamase-like Thimo_3597 IPR036866 Thimo_3597 Thimo_3598 IPR000644 CBS domain Thimo_3598 IPR001093 IMP dehydrogenase/GMP reductase Thimo_3598 IPR005990 Inosine-5'-monophosphate dehydrogenase Thimo_3598 IPR013785 Aldolase-type TIM barrel Thimo_3598 IPR015875 IMP dehydrogenase / GMP reductase, conserved site Thimo_3599 IPR001674 GMP synthase, C-terminal Thimo_3599 IPR004739 GMP synthase, N-terminal Thimo_3599 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3599 IPR017926 Glutamine amidotransferase Thimo_3599 IPR022310 NAD/GMP synthase Thimo_3599 IPR022955 GMP synthase Thimo_3599 IPR029062 Class I glutamine amidotransferase-like Thimo_3600 IPR023614 Porin domain Thimo_3601 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain Thimo_3601 IPR036291 Thimo_3601 Thimo_3602 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal Thimo_3602 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_3602 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation Thimo_3602 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal Thimo_3602 IPR017476 UDP-glucose/GDP-mannose dehydrogenase Thimo_3602 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase Thimo_3602 IPR036220 Thimo_3602 Thimo_3602 IPR036291 Thimo_3602 Thimo_3603 IPR000577 Thimo_3603 Thimo_3603 IPR018484 Carbohydrate kinase, FGGY, N-terminal Thimo_3603 IPR018485 Carbohydrate kinase, FGGY, C-terminal Thimo_3604 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 Thimo_3604 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF Thimo_3605 IPR005584 DNA gyrase inhibitor YacG Thimo_3605 IPR013088 Zinc finger, NHR/GATA-type Thimo_3606 IPR009777 Cell division protein ZapD Thimo_3606 IPR027462 Z ring-associated protein D, C-terminal domain Thimo_3606 IPR036268 Thimo_3606 Thimo_3607 IPR000053 Pyrimidine-nucleoside phosphorylase Thimo_3607 IPR000312 Glycosyl transferase, family 3 Thimo_3607 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal Thimo_3607 IPR013466 Thymidine phosphorylase/AMP phosphorylase Thimo_3607 IPR017459 Glycosyl transferase family 3, N-terminal domain Thimo_3607 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site Thimo_3607 IPR028579 Putative thymidine phosphorylase Thimo_3607 IPR035902 Thimo_3607 Thimo_3607 IPR036320 Thimo_3607 Thimo_3607 IPR036566 Thimo_3607 Thimo_3608 IPR000836 Phosphoribosyltransferase domain Thimo_3608 IPR005946 Ribose-phosphate diphosphokinase Thimo_3608 IPR029057 Phosphoribosyltransferase-like Thimo_3608 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain Thimo_3609 IPR002876 Transcriptional regulator TACO1-like Thimo_3609 IPR017856 Integrase, N-terminal zinc-binding domain-like Thimo_3609 IPR026564 Transcriptional regulator TACO1-like, domain 3 Thimo_3609 IPR029072 YebC-like Thimo_3610 IPR002176 Crossover junction endodeoxyribonuclease RuvC Thimo_3610 IPR012337 Ribonuclease H-like domain Thimo_3610 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site Thimo_3610 IPR036397 Thimo_3610 Thimo_3611 IPR000085 Bacterial DNA recombination protein RuvA Thimo_3611 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 Thimo_3611 IPR010994 RuvA domain 2-like Thimo_3611 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal Thimo_3611 IPR012340 Nucleic acid-binding, OB-fold Thimo_3611 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial Thimo_3611 IPR036267 Thimo_3611 Thimo_3612 IPR005532 Formylglycine-generating sulphatase enzyme domain Thimo_3612 IPR016187 C-type lectin fold Thimo_3613 IPR001969 Aspartic peptidase, active site Thimo_3613 IPR011969 Peptidase aspartic, CHP02281 Thimo_3613 IPR021109 Aspartic peptidase domain Thimo_3614 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding Thimo_3614 IPR012000 Thiamine pyrophosphate enzyme, central domain Thimo_3614 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain Thimo_3614 IPR012846 Acetolactate synthase, large subunit, biosynthetic Thimo_3614 IPR029035 DHS-like NAD/FAD-binding domain Thimo_3614 IPR029061 Thiamin diphosphate-binding fold Thimo_3615 IPR002068 Alpha crystallin/Hsp20 domain Thimo_3615 IPR008978 HSP20-like chaperone Thimo_3616 IPR002068 Alpha crystallin/Hsp20 domain Thimo_3616 IPR008978 HSP20-like chaperone Thimo_3617 IPR002068 Alpha crystallin/Hsp20 domain Thimo_3617 IPR008978 HSP20-like chaperone Thimo_3618 IPR000257 Uroporphyrinogen decarboxylase (URO-D) Thimo_3618 IPR006361 Uroporphyrinogen decarboxylase HemE Thimo_3618 IPR038071 Thimo_3618 Thimo_3619 IPR000943 RNA polymerase sigma-70 Thimo_3619 IPR007627 RNA polymerase sigma-70 region 2 Thimo_3619 IPR007630 RNA polymerase sigma-70 region 4 Thimo_3619 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria Thimo_3619 IPR013324 RNA polymerase sigma factor, region 3/4 Thimo_3619 IPR013325 RNA polymerase sigma factor, region 2 Thimo_3619 IPR014284 RNA polymerase sigma-70 like domain Thimo_3620 IPR004513 ABC transporter, cell division protein FtsX Thimo_3621 IPR003439 ABC transporter-like Thimo_3621 IPR003593 AAA+ ATPase domain Thimo_3621 IPR005286 Cell division protein FtsE, ATP-binding Thimo_3621 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3622 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain Thimo_3622 IPR003593 AAA+ ATPase domain Thimo_3622 IPR004390 Signal-recognition particle receptor FtsY Thimo_3622 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle Thimo_3622 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3622 IPR036225 Thimo_3622 Thimo_3623 IPR007863 Peptidase M16, C-terminal domain Thimo_3623 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Thimo_3623 IPR011765 Peptidase M16, N-terminal Thimo_3624 IPR007863 Peptidase M16, C-terminal domain Thimo_3624 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like Thimo_3624 IPR011765 Peptidase M16, N-terminal Thimo_3625 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_3625 IPR004398 RNA methyltransferase, RsmD Thimo_3625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3626 IPR001980 Coenzyme A biosynthesis protein Thimo_3626 IPR004821 Cytidyltransferase-like domain Thimo_3626 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3627 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Thimo_3627 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3628 IPR000150 Cof protein Thimo_3628 IPR006379 HAD-superfamily hydrolase, subfamily IIB Thimo_3628 IPR023214 HAD-like domain Thimo_3628 IPR036412 Thimo_3628 Thimo_3629 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase Thimo_3629 IPR010979 Ribosomal protein S13-like, H2TH Thimo_3629 IPR012319 DNA glycosylase/AP lyase, catalytic domain Thimo_3629 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding Thimo_3629 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site Thimo_3629 IPR020629 Formamidopyrimidine-DNA glycosylase Thimo_3629 IPR035937 Thimo_3629 Thimo_3630 IPR007318 Phospholipid methyltransferase Thimo_3631 IPR001279 Beta-lactamase-like Thimo_3631 IPR036866 Thimo_3631 Thimo_3632 IPR005331 Sulfotransferase Thimo_3632 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3634 IPR002347 Glucose/ribitol dehydrogenase Thimo_3634 IPR036291 Thimo_3634 Thimo_3635 IPR013216 Methyltransferase type 11 Thimo_3635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3636 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Thimo_3636 IPR036938 Thimo_3636 Thimo_3637 IPR004658 Outer membrane lipoprotein Slp Thimo_3638 IPR004658 Outer membrane lipoprotein Slp Thimo_3639 IPR023214 HAD-like domain Thimo_3639 IPR036412 Thimo_3639 Thimo_3640 IPR006645 NusG, N-terminal Thimo_3640 IPR008991 Translation protein SH3-like domain Thimo_3640 IPR010215 Transcription antitermination protein RfaH Thimo_3640 IPR036735 Thimo_3640 Thimo_3641 IPR011460 Protein of unknown function DUF1566 Thimo_3642 IPR005511 Senescence marker protein-30 (SMP-30) Thimo_3642 IPR011042 Six-bladed beta-propeller, TolB-like Thimo_3642 IPR013658 SMP-30/Gluconolactonase/LRE-like region Thimo_3642 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3642 IPR031322 Thimo_3642 Thimo_3643 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific Thimo_3643 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Thimo_3644 IPR004952 Uncharacterised protein family UPF0460 Thimo_3645 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Thimo_3645 IPR036105 Thimo_3645 Thimo_3646 IPR000318 Nitrogenase component 1, conserved site Thimo_3646 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3646 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein Thimo_3647 IPR000318 Nitrogenase component 1, conserved site Thimo_3647 IPR000510 Nitrogenase/oxidoreductase, component 1 Thimo_3647 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE Thimo_3649 IPR019012 RNA cap guanine-N2 methyltransferase Thimo_3649 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3650 IPR005256 Anthranilate synthase component I, PabB-like Thimo_3650 IPR005801 ADC synthase Thimo_3650 IPR006805 Anthranilate synthase component I, N-terminal Thimo_3650 IPR015890 Chorismate binding, C-terminal Thimo_3650 IPR019999 Anthranilate synthase component I - like Thimo_3651 IPR006346 2-phosphoglycolate phosphatase, prokaryotic Thimo_3651 IPR006439 HAD hydrolase, subfamily IA Thimo_3651 IPR023198 Phosphoglycolate phosphatase, domain 2 Thimo_3651 IPR023214 HAD-like domain Thimo_3651 IPR036412 Thimo_3651 Thimo_3651 IPR037512 Thimo_3651 Thimo_3652 IPR000056 Ribulose-phosphate 3-epimerase-like Thimo_3652 IPR011060 Ribulose-phosphate binding barrel Thimo_3652 IPR013785 Aldolase-type TIM barrel Thimo_3652 IPR026019 Ribulose-phosphate 3-epimerase Thimo_3653 IPR023210 NADP-dependent oxidoreductase domain Thimo_3653 IPR036812 Thimo_3653 Thimo_3654 IPR029057 Phosphoribosyltransferase-like Thimo_3656 IPR002048 EF-hand domain Thimo_3656 IPR011992 EF-hand domain pair Thimo_3656 IPR018247 EF-Hand 1, calcium-binding site Thimo_3657 IPR000644 CBS domain Thimo_3657 IPR003439 ABC transporter-like Thimo_3657 IPR003593 AAA+ ATPase domain Thimo_3657 IPR005892 Glycine betaine transport ATP-binding subunit Thimo_3657 IPR017871 ABC transporter, conserved site Thimo_3657 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3658 IPR000515 MetI-like domain Thimo_3658 IPR035906 Thimo_3658 Thimo_3659 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain Thimo_3660 IPR006015 Universal stress protein A Thimo_3660 IPR006016 UspA Thimo_3660 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Thimo_3661 IPR000060 BCCT transporter family Thimo_3662 IPR012337 Ribonuclease H-like domain Thimo_3662 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_3662 IPR036397 Thimo_3662 Thimo_3663 IPR000595 Cyclic nucleotide-binding domain Thimo_3663 IPR000644 CBS domain Thimo_3663 IPR005105 Protein-PII uridylyltransferase, N-terminal Thimo_3663 IPR014710 RmlC-like jelly roll fold Thimo_3663 IPR018490 Cyclic nucleotide-binding-like Thimo_3663 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Thimo_3665 IPR000185 Protein translocase subunit SecA Thimo_3665 IPR004027 SEC-C motif Thimo_3665 IPR011115 SecA DEAD-like, N-terminal Thimo_3665 IPR011116 SecA Wing/Scaffold Thimo_3665 IPR011130 SecA preprotein, cross-linking domain Thimo_3665 IPR020937 SecA conserved site Thimo_3665 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3665 IPR036266 Thimo_3665 Thimo_3665 IPR036670 Thimo_3665 Thimo_3666 IPR002813 Arginine biosynthesis protein ArgJ Thimo_3666 IPR016117 ArgJ-like domain Thimo_3667 IPR000086 NUDIX hydrolase domain Thimo_3667 IPR003561 Mutator MutT Thimo_3667 IPR013785 Aldolase-type TIM barrel Thimo_3667 IPR015797 NUDIX hydrolase domain-like Thimo_3667 IPR020084 NUDIX hydrolase, conserved site Thimo_3667 IPR020476 NUDIX hydrolase Thimo_3667 IPR022998 Thiamin phosphate synthase superfamily Thimo_3667 IPR036206 Thimo_3667 Thimo_3668 IPR002818 ThiJ/PfpI Thimo_3668 IPR006287 DJ-1 Thimo_3668 IPR029062 Class I glutamine amidotransferase-like Thimo_3669 IPR001478 PDZ domain Thimo_3669 IPR004447 C-terminal-processing peptidase S41A Thimo_3669 IPR005151 Tail specific protease Thimo_3669 IPR029045 ClpP/crotonase-like domain Thimo_3669 IPR036034 Thimo_3669 Thimo_3670 IPR011055 Duplicated hybrid motif Thimo_3670 IPR016047 Peptidase M23 Thimo_3671 IPR001845 HTH ArsR-type DNA-binding domain Thimo_3671 IPR036388 Thimo_3671 Thimo_3671 IPR036390 Thimo_3671 Thimo_3672 IPR001763 Rhodanese-like domain Thimo_3672 IPR036873 Thimo_3672 Thimo_3673 IPR003708 Bacterial protein export chaperone SecB Thimo_3673 IPR035958 Thimo_3673 Thimo_3674 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal Thimo_3674 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Thimo_3674 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Thimo_3674 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal Thimo_3674 IPR013328 Dehydrogenase, multihelical Thimo_3674 IPR036291 Thimo_3674 Thimo_3675 IPR001537 tRNA/rRNA methyltransferase, SpoU type Thimo_3675 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase Thimo_3675 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Thimo_3675 IPR029028 Alpha/beta knot methyltransferases Thimo_3676 IPR001295 Dihydroorotate dehydrogenase, conserved site Thimo_3676 IPR005720 Dihydroorotate dehydrogenase domain Thimo_3676 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 Thimo_3676 IPR013785 Aldolase-type TIM barrel Thimo_3676 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 Thimo_3676 IPR024920 Dihydroorotate dehydrogenase, class 1 Thimo_3679 IPR001789 Signal transduction response regulator, receiver domain Thimo_3679 IPR002078 RNA polymerase sigma factor 54 interaction domain Thimo_3679 IPR002197 DNA binding HTH domain, Fis-type Thimo_3679 IPR003593 AAA+ ATPase domain Thimo_3679 IPR009057 Homeodomain-like Thimo_3679 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) Thimo_3679 IPR011006 CheY-like superfamily Thimo_3679 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Thimo_3679 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Thimo_3679 IPR025944 Sigma-54 interaction domain, conserved site Thimo_3679 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3680 IPR003594 Histidine kinase-like ATPase, C-terminal domain Thimo_3680 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain Thimo_3680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal Thimo_3680 IPR013656 PAS fold-4 Thimo_3680 IPR035965 Thimo_3680 Thimo_3680 IPR036097 Thimo_3680 Thimo_3680 IPR036890 Thimo_3680 Thimo_3681 IPR025392 Domain of unknown function DUF4124 Thimo_3682 IPR001637 Glutamine synthetase class-I, adenylation site Thimo_3682 IPR004809 Glutamine synthetase type I Thimo_3682 IPR008146 Glutamine synthetase, catalytic domain Thimo_3682 IPR008147 Glutamine synthetase, beta-Grasp Thimo_3682 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thimo_3682 IPR027302 Glutamine synthetase, N-terminal conserved site Thimo_3682 IPR027303 Glutamine synthetase, glycine-rich site Thimo_3682 IPR036651 Thimo_3682 Thimo_3683 IPR002524 Cation efflux protein Thimo_3683 IPR027469 Cation efflux protein transmembrane domain Thimo_3683 IPR027470 Cation efflux protein cytoplasmic domain Thimo_3683 IPR036837 Thimo_3683 Thimo_3684 IPR002310 Glycine-tRNA ligase, alpha subunit Thimo_3685 IPR008909 DALR anticodon binding Thimo_3685 IPR015944 Glycine-tRNA ligase, beta subunit Thimo_3686 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase Thimo_3686 IPR006543 Histidinol-phosphate phosphatase Thimo_3686 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Thimo_3686 IPR023214 HAD-like domain Thimo_3686 IPR036412 Thimo_3686 Thimo_3687 IPR002123 Phospholipid/glycerol acyltransferase Thimo_3688 IPR036457 Thimo_3688 Thimo_3689 IPR000719 Protein kinase domain Thimo_3689 IPR011009 Protein kinase-like domain Thimo_3690 IPR003325 TerD domain Thimo_3691 IPR007791 Heat shock protein DnaJ-like protein DjlA Thimo_3691 IPR029024 TerB-like Thimo_3692 IPR003325 TerD domain Thimo_3693 IPR003325 TerD domain Thimo_3694 IPR003325 TerD domain Thimo_3694 IPR017115 Tellurite resistance, TerA Thimo_3695 IPR011214 Uncharacterised conserved protein UCP020967 Thimo_3695 IPR022537 TRSP domain Thimo_3695 IPR029057 Phosphoribosyltransferase-like Thimo_3696 IPR024197 Uncharacterised conserved protein UCP030802 Thimo_3696 IPR036412 Thimo_3696 Thimo_3697 IPR011215 Phosphoribosyl transferase Thimo_3697 IPR028157 PELOTA RNA-binding domain Thimo_3698 IPR011206 Citrate lyase beta subunit-like Thimo_3698 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain Thimo_3698 IPR039480 Thimo_3698 Thimo_3699 IPR005835 Nucleotidyl transferase Thimo_3699 IPR029044 Nucleotide-diphospho-sugar transferases Thimo_3700 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain Thimo_3700 IPR016602 Uncharacterised conserved protein UCP012666 Thimo_3701 IPR004520 tRNA modification GTPase MnmE Thimo_3701 IPR005225 Small GTP-binding protein domain Thimo_3701 IPR006073 GTP binding domain Thimo_3701 IPR018948 GTP-binding protein TrmE, N-terminal Thimo_3701 IPR025867 tRNA modification GTPase MnmE C-terminal domain Thimo_3701 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 Thimo_3701 IPR027368 tRNA modification GTPase MnmE domain 2 Thimo_3701 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3702 IPR001708 Membrane insertase OXA1/ALB3/YidC Thimo_3702 IPR019998 Membrane insertase YidC Thimo_3702 IPR028053 Membrane insertase YidC, N-terminal Thimo_3702 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Thimo_3702 IPR038210 Thimo_3702 Thimo_3702 IPR038221 Thimo_3702 Thimo_3704 IPR009061 DNA binding domain, putative Thimo_3704 IPR010093 Excisionase/Xis, DNA-binding Thimo_3705 IPR021104 KfrA, N-terminal DNA-binding domain Thimo_3706 IPR003812 Fido domain Thimo_3706 IPR036390 Thimo_3706 Thimo_3706 IPR036597 Thimo_3706 Thimo_3710 IPR003739 Lysine-2,3-aminomutase family Thimo_3710 IPR007197 Radical SAM Thimo_3710 IPR013785 Aldolase-type TIM barrel Thimo_3710 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Thimo_3711 IPR011095 D-alanine--D-alanine ligase, C-terminal Thimo_3711 IPR013815 ATP-grasp fold, subdomain 1 Thimo_3711 IPR016185 Pre-ATP-grasp domain Thimo_3712 IPR003462 Ornithine cyclodeaminase/mu-crystallin Thimo_3712 IPR023401 Ornithine cyclodeaminase, N-terminal Thimo_3712 IPR036291 Thimo_3712 Thimo_3713 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site Thimo_3713 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme Thimo_3713 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA Thimo_3713 IPR036052 Thimo_3713 Thimo_3714 IPR005814 Aminotransferase class-III Thimo_3714 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 Thimo_3714 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Thimo_3714 IPR015424 Pyridoxal phosphate-dependent transferase Thimo_3717 IPR008878 Transposase IS66, Orf2 Thimo_3718 IPR004291 Transposase, IS66 Thimo_3718 IPR024463 Transposase TnpC, homeodomain Thimo_3718 IPR039552 Thimo_3718 Thimo_3720 IPR026937 Strawberry notch, helicase C domain Thimo_3720 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3720 IPR039187 Thimo_3720 Thimo_3721 IPR013610 Domain of unknown function DUF1738 Thimo_3721 IPR017113 Antirestriction, ArdC Thimo_3724 IPR008687 Bacterial mobilisation Thimo_3726 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_3726 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3728 IPR010985 Ribbon-helix-helix Thimo_3728 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor Thimo_3728 IPR038296 Thimo_3728 Thimo_3729 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Thimo_3729 IPR035093 Thimo_3729 Thimo_3730 IPR004291 Transposase, IS66 Thimo_3730 IPR024463 Transposase TnpC, homeodomain Thimo_3730 IPR039552 Thimo_3730 Thimo_3731 IPR008878 Transposase IS66, Orf2 Thimo_3733 IPR025657 RadC-like JAB domain Thimo_3734 IPR011646 KAP P-loop Thimo_3734 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3735 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3736 IPR025054 Domain of unknown function DUF3991 Thimo_3738 IPR003115 ParB/Sulfiredoxin Thimo_3738 IPR004437 ParB/RepB/Spo0J partition protein family Thimo_3738 IPR013741 Transcriptional repressor protein KorB Thimo_3738 IPR036086 Thimo_3738 Thimo_3739 IPR025669 AAA domain Thimo_3739 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3740 IPR010985 Ribbon-helix-helix Thimo_3743 IPR001405 RadC protein Thimo_3743 IPR020891 Uncharacterised protein family UPF0758, conserved site Thimo_3743 IPR025657 RadC-like JAB domain Thimo_3744 IPR003593 AAA+ ATPase domain Thimo_3744 IPR025420 Domain of unknown function DUF4143 Thimo_3744 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3748 IPR000525 Initiator Rep protein Thimo_3748 IPR036388 Thimo_3748 Thimo_3748 IPR036390 Thimo_3748 Thimo_3749 IPR009057 Homeodomain-like Thimo_3749 IPR018060 DNA binding HTH domain, AraC-type Thimo_3749 IPR032687 Thimo_3749 Thimo_3750 IPR008258 Lytic transglycosylase-like SLT domain Thimo_3750 IPR023346 Lysozyme-like domain Thimo_3751 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 Thimo_3752 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB Thimo_3753 IPR004346 CagE, TrbE, VirB component of type IV transporter system Thimo_3753 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain Thimo_3753 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3754 IPR014158 Type IV secretion system, VirB5 Thimo_3754 IPR023220 Type IV secretion system, VirB5-domain Thimo_3756 IPR007688 Conjugal transfer, TrbL/VirB6 Thimo_3758 IPR007430 Bacterial virulence protein VirB8 Thimo_3758 IPR026264 Type IV secretion system protein VirB8/PtlE Thimo_3758 IPR032710 Thimo_3758 Thimo_3759 IPR010258 Conjugal transfer, TrbG/VirB9/CagX Thimo_3759 IPR038161 Thimo_3759 Thimo_3760 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI Thimo_3761 IPR001482 Type II secretion system protein E Thimo_3761 IPR014155 Type IV secretion system protein VirB11 Thimo_3761 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3762 IPR003688 Ti-type conjugative transfer system, TraG-like Thimo_3762 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3763 IPR009989 TrbM Thimo_3765 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain Thimo_3765 IPR000357 HEAT Thimo_3765 IPR004155 PBS lyase HEAT-like repeat Thimo_3765 IPR011989 Armadillo-like helical Thimo_3765 IPR016024 Armadillo-type fold Thimo_3765 IPR035897 Thimo_3765 Thimo_3766 IPR002104 Integrase, catalytic Thimo_3766 IPR004107 Integrase, SAM-like, N-terminal Thimo_3766 IPR010998 Integrase, Lambda-type, N-terminal Thimo_3766 IPR011010 DNA breaking-rejoining enzyme, catalytic core Thimo_3766 IPR013762 Integrase-like, catalytic core Thimo_3767 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Thimo_3767 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3768 IPR012337 Ribonuclease H-like domain Thimo_3768 IPR013520 Exonuclease, RNase T/DNA polymerase III Thimo_3768 IPR036397 Thimo_3768 Thimo_3769 IPR008893 WGR domain Thimo_3769 IPR036930 Thimo_3769 Thimo_3771 IPR004291 Transposase, IS66 Thimo_3771 IPR024463 Transposase TnpC, homeodomain Thimo_3771 IPR039552 Thimo_3771 Thimo_3772 IPR008878 Transposase IS66, Orf2 Thimo_3774 IPR000477 Reverse transcriptase domain Thimo_3774 IPR013597 Group II intron, maturase-specific Thimo_3777 IPR014061 Conserved hypothetical protein CHP02688 Thimo_3777 IPR032341 Thimo_3777 Thimo_3777 IPR038113 Thimo_3777 Thimo_3778 IPR013973 PglZ domain Thimo_3779 IPR021799 Protein of unknown function DUF3368 Thimo_3780 IPR005368 Uncharacterised protein family UPF0175 Thimo_3782 IPR018742 Protein of unknown function DUF2290 Thimo_3783 IPR027417 P-loop containing nucleoside triphosphate hydrolase Thimo_3783 IPR027785 UvrD-like helicase C-terminal domain Thimo_3784 IPR002052 DNA methylase, N-6 adenine-specific, conserved site Thimo_3784 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like Thimo_3786 IPR014858 Protein of unknown function DUF1788 Thimo_3787 IPR014948 Protein of unknown function DUF1819, putative inner membrane