locus-tag class description TspCOW1_00010 PF05362 Lon protease (S16) C-terminal proteolytic domain TspCOW1_00010 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_00010 PF02190 ATP-dependent protease La (LON) substrate-binding domain TspCOW1_00020 PF03453 MoeA N-terminal region (domain I and II) TspCOW1_00020 PF03454 MoeA C-terminal region (domain IV) TspCOW1_00020 PF00994 Probable molybdopterin binding domain TspCOW1_00030 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TspCOW1_00040 PF12804 MobA-like NTP transferase domain TspCOW1_00060 PF00313 'Cold-shock' DNA-binding domain TspCOW1_00080 PF14535 AMP-binding enzyme C-terminal domain TspCOW1_00080 PF00501 AMP-binding enzyme TspCOW1_00090 PF00589 Phage integrase family TspCOW1_00090 PF02899 Phage integrase, N-terminal SAM-like domain TspCOW1_00100 PF10411 Disulfide bond isomerase protein N-terminus TspCOW1_00100 PF13098 Thioredoxin-like domain TspCOW1_00110 PF00085 Thioredoxin TspCOW1_00120 PF12705 PD-(D/E)XK nuclease superfamily TspCOW1_00120 PF00580 UvrD/REP helicase N-terminal domain TspCOW1_00120 PF13361 UvrD-like helicase C-terminal domain TspCOW1_00150 PF11953 Domain of unknown function (DUF3470) TspCOW1_00150 PF00037 4Fe-4S binding domain TspCOW1_00160 PF00360 Phytochrome region TspCOW1_00160 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_00160 PF01590 GAF domain TspCOW1_00160 PF00563 EAL domain TspCOW1_00170 PF00072 Response regulator receiver domain TspCOW1_00170 PF01339 CheB methylesterase TspCOW1_00180 PF01584 CheW-like domain TspCOW1_00180 PF00072 Response regulator receiver domain TspCOW1_00180 PF01627 Hpt domain TspCOW1_00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_00200 PF01739 CheR methyltransferase, SAM binding domain TspCOW1_00220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_00230 PF01624 MutS domain I TspCOW1_00230 PF05188 MutS domain II TspCOW1_00230 PF05192 MutS domain III TspCOW1_00230 PF05190 MutS family domain IV TspCOW1_00230 PF00488 MutS domain V TspCOW1_00280 PF01695 IstB-like ATP binding protein TspCOW1_00290 PF00665 Integrase core domain TspCOW1_00310 PF00440 Bacterial regulatory proteins, tetR family TspCOW1_00330 PF03109 ABC1 family TspCOW1_00340 PF01734 Patatin-like phospholipase TspCOW1_00370 PF00873 AcrB/AcrD/AcrF family TspCOW1_00390 PF13533 Biotin-lipoyl like TspCOW1_00400 PF00005 ABC transporter TspCOW1_00410 PF00005 ABC transporter TspCOW1_00450 PF07690 Major Facilitator Superfamily TspCOW1_00460 PF00529 HlyD membrane-fusion protein of T1SS TspCOW1_00460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_00490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TspCOW1_00500 PF00043 Glutathione S-transferase, C-terminal domain TspCOW1_00500 PF02798 Glutathione S-transferase, N-terminal domain TspCOW1_00510 PF01638 HxlR-like helix-turn-helix TspCOW1_00610 PF03852 DNA mismatch endonuclease Vsr TspCOW1_00620 PF00145 C-5 cytosine-specific DNA methylase TspCOW1_00660 PF12161 HsdM N-terminal domain TspCOW1_00660 PF02384 N-6 DNA Methylase TspCOW1_00700 PF06114 IrrE N-terminal-like domain TspCOW1_00730 PF06122 Conjugative relaxosome accessory transposon protein TspCOW1_00750 PF06986 Type-1V conjugative transfer system mating pair stabilisation TspCOW1_00780 PF06834 TraU protein TspCOW1_00900 PF01389 OmpA-like transmembrane domain TspCOW1_00900 PF00691 OmpA family TspCOW1_00910 PF01464 Transglycosylase SLT domain TspCOW1_00920 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_00920 PF00593 TonB dependent receptor TspCOW1_00950 PF12801 4Fe-4S binding domain TspCOW1_00960 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TspCOW1_00970 PF01869 BadF/BadG/BcrA/BcrD ATPase family TspCOW1_01000 PF05598 Transposase domain (DUF772) TspCOW1_01000 PF01609 Transposase DDE domain TspCOW1_01060 PF04002 RadC-like JAB domain TspCOW1_01150 PF02195 ParB-like nuclease domain TspCOW1_01150 PF17762 HTH domain found in ParB protein TspCOW1_01160 PF01751 Toprim domain TspCOW1_01160 PF01131 DNA topoisomerase TspCOW1_01240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TspCOW1_01390 PF02464 Competence-damaged protein TspCOW1_01400 PF02834 LigT like Phosphoesterase TspCOW1_01410 PF00154 recA bacterial DNA recombination protein TspCOW1_01420 PF02631 RecX family TspCOW1_01430 PF02272 DHHA1 domain TspCOW1_01430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TspCOW1_01430 PF01411 tRNA synthetases class II (A) TspCOW1_01440 PF00696 Amino acid kinase family TspCOW1_01440 PF13840 ACT domain TspCOW1_01440 PF01842 ACT domain TspCOW1_01450 PF02599 Global regulator protein family TspCOW1_01500 PF17287 POTRA domain TspCOW1_01500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB TspCOW1_01500 PF08479 POTRA domain, ShlB-type TspCOW1_01530 PF05860 haemagglutination activity domain TspCOW1_01540 PF01618 MotA/TolQ/ExbB proton channel family TspCOW1_01550 PF02472 Biopolymer transport protein ExbD/TolR TspCOW1_01630 PF07669 Eco57I restriction-modification methylase TspCOW1_01780 PF00239 Resolvase, N terminal domain TspCOW1_01780 PF02796 Helix-turn-helix domain of resolvase TspCOW1_01900 PF00271 Helicase conserved C-terminal domain TspCOW1_01900 PF04851 Type III restriction enzyme, res subunit TspCOW1_01970 PF02195 ParB-like nuclease domain TspCOW1_02060 PF01343 Peptidase family S49 TspCOW1_02310 PF03852 DNA mismatch endonuclease Vsr TspCOW1_02360 PF00176 SNF2 family N-terminal domain TspCOW1_02360 PF00271 Helicase conserved C-terminal domain TspCOW1_02380 PF00271 Helicase conserved C-terminal domain TspCOW1_02380 PF12137 RNA polymerase recycling family C-terminal TspCOW1_02380 PF00176 SNF2 family N-terminal domain TspCOW1_02380 PF18339 RapA N-terminal Tudor like domain 1 TspCOW1_02380 PF18337 RapA N-terminal Tudor like domain TspCOW1_02390 PF00145 C-5 cytosine-specific DNA methylase TspCOW1_02430 PF13784 Fic/DOC family N-terminal TspCOW1_02430 PF02661 Fic/DOC family TspCOW1_02440 PF01555 DNA methylase TspCOW1_02440 PF18273 Type III R-M EcoP15I C-terminal domain TspCOW1_02450 PF01527 Transposase TspCOW1_02460 PF13276 HTH-like domain TspCOW1_02460 PF00665 Integrase core domain TspCOW1_02460 PF13333 Integrase core domain TspCOW1_02480 PF00378 Enoyl-CoA hydratase/isomerase TspCOW1_02490 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_02490 PF01627 Hpt domain TspCOW1_02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_02490 PF00072 Response regulator receiver domain TspCOW1_02500 PF00072 Response regulator receiver domain TspCOW1_02530 PF03150 Di-haem cytochrome c peroxidase TspCOW1_02530 PF00034 Cytochrome c TspCOW1_02550 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TspCOW1_02550 PF00361 Proton-conducting membrane transporter TspCOW1_02560 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) TspCOW1_02580 PF13439 Glycosyltransferase Family 4 TspCOW1_02580 PF00534 Glycosyl transferases group 1 TspCOW1_02600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_02600 PF03466 LysR substrate binding domain TspCOW1_02610 PF02525 Flavodoxin-like fold TspCOW1_02620 PF02678 Pirin TspCOW1_02620 PF05726 Pirin C-terminal cupin domain TspCOW1_02640 PF02773 S-adenosylmethionine synthetase, C-terminal domain TspCOW1_02640 PF00438 S-adenosylmethionine synthetase, N-terminal domain TspCOW1_02640 PF02772 S-adenosylmethionine synthetase, central domain TspCOW1_02650 PF08241 Methyltransferase domain TspCOW1_02660 PF13649 Methyltransferase domain TspCOW1_02680 PF12169 DNA polymerase III subunits gamma and tau domain III TspCOW1_02680 PF12170 DNA polymerase III tau subunit V interacting with alpha TspCOW1_02680 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TspCOW1_02690 PF02575 YbaB/EbfC DNA-binding family TspCOW1_02700 PF13662 Toprim domain TspCOW1_02700 PF02132 RecR protein TspCOW1_02730 PF01230 HIT domain TspCOW1_02740 PF03193 RsgA GTPase TspCOW1_02750 PF01329 Pterin 4 alpha carbinolamine dehydratase TspCOW1_02770 PF01435 Peptidase family M48 TspCOW1_02780 PF00929 Exonuclease TspCOW1_02790 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TspCOW1_02790 PF02896 PEP-utilising enzyme, TIM barrel domain TspCOW1_02790 PF00391 PEP-utilising enzyme, mobile domain TspCOW1_02800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TspCOW1_02800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TspCOW1_02810 PF03618 Kinase/pyrophosphorylase TspCOW1_02820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TspCOW1_02820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TspCOW1_02820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TspCOW1_02820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TspCOW1_02840 PF02082 Transcriptional regulator TspCOW1_02860 PF00465 Iron-containing alcohol dehydrogenase TspCOW1_02870 PF03992 Antibiotic biosynthesis monooxygenase TspCOW1_02890 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_02890 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_02890 PF00563 EAL domain TspCOW1_02900 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_02900 PF00563 EAL domain TspCOW1_02900 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_02910 PF00929 Exonuclease TspCOW1_02930 PF00474 Sodium:solute symporter family TspCOW1_03000 PF00343 Carbohydrate phosphorylase TspCOW1_03010 PF01230 HIT domain TspCOW1_03040 PF01464 Transglycosylase SLT domain TspCOW1_03040 PF00497 Bacterial extracellular solute-binding proteins, family 3 TspCOW1_03060 PF00111 2Fe-2S iron-sulfur cluster binding domain TspCOW1_03060 PF01799 [2Fe-2S] binding domain TspCOW1_03080 PF02625 XdhC and CoxI family TspCOW1_03080 PF13478 XdhC Rossmann domain TspCOW1_03090 PF12804 MobA-like NTP transferase domain TspCOW1_03110 PF01476 LysM domain TspCOW1_03110 PF01464 Transglycosylase SLT domain TspCOW1_03130 PF00075 RNase H TspCOW1_03140 PF00929 Exonuclease TspCOW1_03150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TspCOW1_03150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TspCOW1_03150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TspCOW1_03160 PF01370 NAD dependent epimerase/dehydratase family TspCOW1_03170 PF00027 Cyclic nucleotide-binding domain TspCOW1_03170 PF13545 Crp-like helix-turn-helix domain TspCOW1_03180 PF02397 Bacterial sugar transferase TspCOW1_03200 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_03210 PF00158 Sigma-54 interaction domain TspCOW1_03210 PF00072 Response regulator receiver domain TspCOW1_03210 PF02954 Bacterial regulatory protein, Fis family TspCOW1_03240 PF13847 Methyltransferase domain TspCOW1_03240 PF03551 Transcriptional regulator PadR-like family TspCOW1_03260 PF00899 ThiF family TspCOW1_03280 PF10531 SLBB domain TspCOW1_03280 PF02563 Polysaccharide biosynthesis/export protein TspCOW1_03300 PF13614 AAA domain TspCOW1_03320 PF13401 AAA domain TspCOW1_03320 PF01471 Putative peptidoglycan binding domain TspCOW1_03330 PF02350 UDP-N-acetylglucosamine 2-epimerase TspCOW1_03340 PF01522 Polysaccharide deacetylase TspCOW1_03380 PF13439 Glycosyltransferase Family 4 TspCOW1_03380 PF00534 Glycosyl transferases group 1 TspCOW1_03390 PF13537 Glutamine amidotransferase domain TspCOW1_03390 PF00733 Asparagine synthase TspCOW1_03400 PF00534 Glycosyl transferases group 1 TspCOW1_03410 PF00534 Glycosyl transferases group 1 TspCOW1_03410 PF13439 Glycosyltransferase Family 4 TspCOW1_03480 PF00534 Glycosyl transferases group 1 TspCOW1_03480 PF13439 Glycosyltransferase Family 4 TspCOW1_03500 PF02657 Fe-S metabolism associated domain TspCOW1_03510 PF01521 Iron-sulphur cluster biosynthesis TspCOW1_03520 PF01883 Iron-sulfur cluster assembly protein TspCOW1_03530 PF01458 Uncharacterized protein family (UPF0051) TspCOW1_03540 PF00005 ABC transporter TspCOW1_03550 PF01458 Uncharacterized protein family (UPF0051) TspCOW1_03570 PF00884 Sulfatase TspCOW1_03580 PF13181 Tetratricopeptide repeat TspCOW1_03610 PF13180 PDZ domain TspCOW1_03640 PF07475 HPr Serine kinase C-terminal domain TspCOW1_03640 PF02603 HPr Serine kinase N terminus TspCOW1_03660 PF01370 NAD dependent epimerase/dehydratase family TspCOW1_03690 PF01924 Hydrogenase formation hypA family TspCOW1_03700 PF02492 CobW/HypB/UreG, nucleotide-binding domain TspCOW1_03710 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TspCOW1_03720 PF01455 HupF/HypC family TspCOW1_03760 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TspCOW1_03760 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TspCOW1_03790 PF00374 Nickel-dependent hydrogenase TspCOW1_03810 PF17179 4Fe-4S dicluster domain TspCOW1_03820 PF00175 Oxidoreductase NAD-binding domain TspCOW1_03820 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TspCOW1_03820 PF00970 Oxidoreductase FAD-binding domain TspCOW1_03850 PF01734 Patatin-like phospholipase TspCOW1_03880 PF00550 Phosphopantetheine attachment site TspCOW1_03880 PF01370 NAD dependent epimerase/dehydratase family TspCOW1_03880 PF00501 AMP-binding enzyme TspCOW1_03890 PF02769 AIR synthase related protein, C-terminal domain TspCOW1_03890 PF00586 AIR synthase related protein, N-terminal domain TspCOW1_03900 PF00708 Acylphosphatase TspCOW1_03900 PF01300 Telomere recombination TspCOW1_03900 PF07503 HypF finger TspCOW1_03900 PF17788 HypF Kae1-like domain TspCOW1_03920 PF00578 AhpC/TSA family TspCOW1_03980 PF06167 Glucose-regulated metallo-peptidase M90 TspCOW1_04000 PF02028 BCCT, betaine/carnitine/choline family transporter TspCOW1_04030 PF00749 tRNA synthetases class I (E and Q), catalytic domain TspCOW1_04050 PF01116 Fructose-bisphosphate aldolase class-II TspCOW1_04060 PF02811 PHP domain TspCOW1_04060 PF14716 Helix-hairpin-helix domain TspCOW1_04060 PF14791 DNA polymerase beta thumb TspCOW1_04070 PF01139 tRNA-splicing ligase RtcB TspCOW1_04100 PF05362 Lon protease (S16) C-terminal proteolytic domain TspCOW1_04100 PF13654 AAA domain TspCOW1_04150 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system TspCOW1_04160 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA TspCOW1_04170 PF09957 Bacterial antitoxin of type II TA system, VapB TspCOW1_04200 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_04200 PF08448 PAS fold TspCOW1_04200 PF00072 Response regulator receiver domain TspCOW1_04200 PF13188 PAS domain TspCOW1_04210 PF00158 Sigma-54 interaction domain TspCOW1_04210 PF02954 Bacterial regulatory protein, Fis family TspCOW1_04210 PF00072 Response regulator receiver domain TspCOW1_04220 PF00582 Universal stress protein family TspCOW1_04250 PF05166 YcgL domain TspCOW1_04250 PF05116 Sucrose-6F-phosphate phosphohydrolase TspCOW1_04260 PF01026 TatD related DNase TspCOW1_04280 PF00085 Thioredoxin TspCOW1_04290 PF10609 NUBPL iron-transfer P-loop NTPase TspCOW1_04320 PF03795 YCII-related domain TspCOW1_04330 PF04279 Intracellular septation protein A TspCOW1_04340 PF02811 PHP domain TspCOW1_04350 PF01300 Telomere recombination TspCOW1_04360 PF02163 Peptidase family M50 TspCOW1_04370 PF00579 tRNA synthetases class I (W and Y) TspCOW1_04380 PF02616 Segregation and condensation protein ScpA TspCOW1_04390 PF04079 Segregation and condensation complex subunit ScpB TspCOW1_04400 PF00849 RNA pseudouridylate synthase TspCOW1_04400 PF01479 S4 domain TspCOW1_04420 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_04420 PF08448 PAS fold TspCOW1_04440 PF00106 short chain dehydrogenase TspCOW1_04450 PF01593 Flavin containing amine oxidoreductase TspCOW1_04480 PF02646 RmuC family TspCOW1_04490 PF13419 Haloacid dehalogenase-like hydrolase TspCOW1_04510 PF01979 Amidohydrolase family TspCOW1_04520 PF00924 Mechanosensitive ion channel TspCOW1_04520 PF05552 Conserved TM helix TspCOW1_04530 PF05736 OprF membrane domain TspCOW1_04530 PF00691 OmpA family TspCOW1_04540 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_04540 PF00072 Response regulator receiver domain TspCOW1_04550 PF01008 Initiation factor 2 subunit family TspCOW1_04560 PF00521 DNA gyrase/topoisomerase IV, subunit A TspCOW1_04560 PF03989 DNA gyrase C-terminal domain, beta-propeller TspCOW1_04570 PF00266 Aminotransferase class-V TspCOW1_04580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TspCOW1_04580 PF01842 ACT domain TspCOW1_04580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TspCOW1_04590 PF00800 Prephenate dehydratase TspCOW1_04590 PF01817 Chorismate mutase type II TspCOW1_04590 PF01842 ACT domain TspCOW1_04600 PF00155 Aminotransferase class I and II TspCOW1_04610 PF02153 Prephenate dehydrogenase TspCOW1_04620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TspCOW1_04630 PF02224 Cytidylate kinase TspCOW1_04640 PF00575 S1 RNA binding domain TspCOW1_04650 PF00216 Bacterial DNA-binding protein TspCOW1_04670 PF18073 Rubredoxin metal binding domain TspCOW1_04680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TspCOW1_04700 PF01050 Mannose-6-phosphate isomerase TspCOW1_04700 PF00483 Nucleotidyl transferase TspCOW1_04770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TspCOW1_04780 PF02397 Bacterial sugar transferase TspCOW1_04790 PF01209 ubiE/COQ5 methyltransferase family TspCOW1_04840 PF00535 Glycosyl transferase family 2 TspCOW1_04860 PF02719 Polysaccharide biosynthesis protein TspCOW1_04870 PF00483 Nucleotidyl transferase TspCOW1_04880 PF00155 Aminotransferase class I and II TspCOW1_04890 PF17757 UvrB interaction domain TspCOW1_04890 PF02151 UvrB/uvrC motif TspCOW1_04890 PF04851 Type III restriction enzyme, res subunit TspCOW1_04890 PF00271 Helicase conserved C-terminal domain TspCOW1_04890 PF12344 Ultra-violet resistance protein B TspCOW1_04910 PF00149 Calcineurin-like phosphoesterase TspCOW1_04920 PF00034 Cytochrome c TspCOW1_04920 PF03150 Di-haem cytochrome c peroxidase TspCOW1_04930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TspCOW1_04930 PF02824 TGS domain TspCOW1_04930 PF03129 Anticodon binding domain TspCOW1_04930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TspCOW1_04940 PF05198 Translation initiation factor IF-3, N-terminal domain TspCOW1_04940 PF00707 Translation initiation factor IF-3, C-terminal domain TspCOW1_04950 PF01632 Ribosomal protein L35 TspCOW1_04960 PF00453 Ribosomal protein L20 TspCOW1_04970 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TspCOW1_04970 PF01409 tRNA synthetases class II core domain (F) TspCOW1_04980 PF03483 B3/4 domain TspCOW1_04980 PF03484 tRNA synthetase B5 domain TspCOW1_04980 PF03147 Ferredoxin-fold anticodon binding domain TspCOW1_04980 PF01588 Putative tRNA binding domain TspCOW1_04980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TspCOW1_04990 PF00216 Bacterial DNA-binding protein TspCOW1_05000 PF13411 MerR HTH family regulatory protein TspCOW1_05030 PF00793 DAHP synthetase I family TspCOW1_05040 PF00472 RF-1 domain TspCOW1_05040 PF03462 PCRF domain TspCOW1_05050 PF01336 OB-fold nucleic acid binding domain TspCOW1_05050 PF00152 tRNA synthetases class II (D, K and N) TspCOW1_05060 PF00563 EAL domain TspCOW1_05060 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_05060 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_05090 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TspCOW1_05100 PF02910 Fumarate reductase flavoprotein C-term TspCOW1_05100 PF00890 FAD binding domain TspCOW1_05110 PF13085 2Fe-2S iron-sulfur cluster binding domain TspCOW1_05120 PF03937 Flavinator of succinate dehydrogenase TspCOW1_05130 PF01928 CYTH domain TspCOW1_05160 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_05170 PF12911 N-terminal TM domain of oligopeptide transport permease C TspCOW1_05170 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_05180 PF00933 Glycosyl hydrolase family 3 N terminal domain TspCOW1_05190 PF00924 Mechanosensitive ion channel TspCOW1_05200 PF01734 Patatin-like phospholipase TspCOW1_05210 PF00156 Phosphoribosyl transferase domain TspCOW1_05220 PF01048 Phosphorylase superfamily TspCOW1_05230 PF00578 AhpC/TSA family TspCOW1_05240 PF00795 Carbon-nitrogen hydrolase TspCOW1_05240 PF00583 Acetyltransferase (GNAT) family TspCOW1_05290 PF13333 Integrase core domain TspCOW1_05290 PF13276 HTH-like domain TspCOW1_05290 PF00665 Integrase core domain TspCOW1_05350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TspCOW1_05370 PF00270 DEAD/DEAH box helicase TspCOW1_05370 PF03461 TRCF domain TspCOW1_05370 PF02559 CarD-like/TRCF domain TspCOW1_05370 PF17757 UvrB interaction domain TspCOW1_05370 PF00271 Helicase conserved C-terminal domain TspCOW1_05380 PF08003 Protein of unknown function (DUF1698) TspCOW1_05390 PF13649 Methyltransferase domain TspCOW1_05400 PF03692 Putative zinc- or iron-chelating domain TspCOW1_05420 PF01903 CbiX TspCOW1_05430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TspCOW1_05470 PF01546 Peptidase family M20/M25/M40 TspCOW1_05470 PF07687 Peptidase dimerisation domain TspCOW1_05480 PF03960 ArsC family TspCOW1_05490 PF00563 EAL domain TspCOW1_05490 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_05490 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_05500 PF01022 Bacterial regulatory protein, arsR family TspCOW1_05510 PF01451 Low molecular weight phosphotyrosine protein phosphatase TspCOW1_05520 PF01758 Sodium Bile acid symporter family TspCOW1_05550 PF07995 Glucose / Sorbosone dehydrogenase TspCOW1_05560 PF00027 Cyclic nucleotide-binding domain TspCOW1_05560 PF07885 Ion channel TspCOW1_05600 PF03334 Na+/H+ antiporter subunit TspCOW1_05610 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TspCOW1_05630 PF00361 Proton-conducting membrane transporter TspCOW1_05640 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TspCOW1_05650 PF00361 Proton-conducting membrane transporter TspCOW1_05650 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TspCOW1_05650 PF13244 Domain of unknown function (DUF4040) TspCOW1_05650 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TspCOW1_05660 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TspCOW1_05660 PF14602 Hexapeptide repeat of succinyl-transferase TspCOW1_05660 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_05670 PF00155 Aminotransferase class I and II TspCOW1_05710 PF04358 DsrC like protein TspCOW1_05720 PF01909 Nucleotidyltransferase domain TspCOW1_05720 PF01966 HD domain TspCOW1_05720 PF01842 ACT domain TspCOW1_05720 PF08335 GlnD PII-uridylyltransferase TspCOW1_05730 PF00557 Metallopeptidase family M24 TspCOW1_05740 PF00318 Ribosomal protein S2 TspCOW1_05750 PF00889 Elongation factor TS TspCOW1_05760 PF00696 Amino acid kinase family TspCOW1_05770 PF01765 Ribosome recycling factor TspCOW1_05780 PF01255 Putative undecaprenyl diphosphate synthase TspCOW1_05800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TspCOW1_05800 PF13288 DXP reductoisomerase C-terminal domain TspCOW1_05800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TspCOW1_05810 PF13180 PDZ domain TspCOW1_05810 PF17820 PDZ domain TspCOW1_05810 PF02163 Peptidase family M50 TspCOW1_05820 PF01103 Surface antigen TspCOW1_05820 PF07244 Surface antigen variable number repeat TspCOW1_05840 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_05840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TspCOW1_05850 PF07977 FabA-like domain TspCOW1_05860 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TspCOW1_05860 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_05870 PF02684 Lipid-A-disaccharide synthetase TspCOW1_05880 PF01351 Ribonuclease HII TspCOW1_05890 PF02321 Outer membrane efflux protein TspCOW1_05900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_05910 PF12704 MacB-like periplasmic core domain TspCOW1_05910 PF02687 FtsX-like permease family TspCOW1_05910 PF00005 ABC transporter TspCOW1_05920 PF02687 FtsX-like permease family TspCOW1_05920 PF12704 MacB-like periplasmic core domain TspCOW1_05920 PF00005 ABC transporter TspCOW1_05930 PF02811 PHP domain TspCOW1_05930 PF07733 Bacterial DNA polymerase III alpha NTPase domain TspCOW1_05930 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TspCOW1_05930 PF14579 Helix-hairpin-helix motif TspCOW1_05930 PF01336 OB-fold nucleic acid binding domain TspCOW1_05940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TspCOW1_05950 PF09179 TilS substrate binding domain TspCOW1_05950 PF01171 PP-loop family TspCOW1_05950 PF11734 TilS substrate C-terminal domain TspCOW1_05960 PF06418 CTP synthase N-terminus TspCOW1_05960 PF00117 Glutamine amidotransferase class-I TspCOW1_05970 PF00793 DAHP synthetase I family TspCOW1_05980 PF03952 Enolase, N-terminal domain TspCOW1_05980 PF00113 Enolase, C-terminal TIM barrel domain TspCOW1_05990 PF04977 Septum formation initiator TspCOW1_06000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TspCOW1_06010 PF02542 YgbB family TspCOW1_06020 PF12161 HsdM N-terminal domain TspCOW1_06020 PF02384 N-6 DNA Methylase TspCOW1_06030 PF01420 Type I restriction modification DNA specificity domain TspCOW1_06050 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TspCOW1_06050 PF08463 EcoEI R protein C-terminal TspCOW1_06050 PF04851 Type III restriction enzyme, res subunit TspCOW1_06050 PF00271 Helicase conserved C-terminal domain TspCOW1_06110 PF01142 tRNA pseudouridine synthase D (TruD) TspCOW1_06120 PF00488 MutS domain V TspCOW1_06120 PF01713 Smr domain TspCOW1_06130 PF01975 Survival protein SurE TspCOW1_06150 PF09335 SNARE associated Golgi protein TspCOW1_06160 PF01476 LysM domain TspCOW1_06160 PF01551 Peptidase family M23 TspCOW1_06170 PF04542 Sigma-70 region 2 TspCOW1_06170 PF04539 Sigma-70 region 3 TspCOW1_06170 PF00140 Sigma-70 factor, region 1.2 TspCOW1_06170 PF04545 Sigma-70, region 4 TspCOW1_06190 PF00155 Aminotransferase class I and II TspCOW1_06200 PF03447 Homoserine dehydrogenase, NAD binding domain TspCOW1_06200 PF01842 ACT domain TspCOW1_06200 PF00742 Homoserine dehydrogenase TspCOW1_06210 PF00291 Pyridoxal-phosphate dependent enzyme TspCOW1_06230 PF17768 RecJ OB domain TspCOW1_06230 PF02272 DHHA1 domain TspCOW1_06230 PF01368 DHH family TspCOW1_06250 PF05951 Bacterial protein of unknown function (DUF882) TspCOW1_06270 PF00999 Sodium/hydrogen exchanger family TspCOW1_06270 PF03471 Transporter associated domain TspCOW1_06270 PF02080 TrkA-C domain TspCOW1_06320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_06320 PF02874 ATP synthase alpha/beta family, beta-barrel domain TspCOW1_06330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_06330 PF02874 ATP synthase alpha/beta family, beta-barrel domain TspCOW1_06330 PF16886 ATPsynthase alpha/beta subunit N-term extension TspCOW1_06360 PF00137 ATP synthase subunit C TspCOW1_06370 PF01496 V-type ATPase 116kDa subunit family TspCOW1_06410 PF00582 Universal stress protein family TspCOW1_06440 PF03448 MgtE intracellular N domain TspCOW1_06440 PF00571 CBS domain TspCOW1_06440 PF01769 Divalent cation transporter TspCOW1_06490 PF10011 Predicted membrane protein (DUF2254) TspCOW1_06510 PF01292 Prokaryotic cytochrome b561 TspCOW1_06540 PF00107 Zinc-binding dehydrogenase TspCOW1_06540 PF08240 Alcohol dehydrogenase GroES-like domain TspCOW1_06550 PF00756 Putative esterase TspCOW1_06580 PF00206 Lyase TspCOW1_06580 PF08328 Adenylosuccinate lyase C-terminal TspCOW1_06590 PF00694 Aconitase C-terminal domain TspCOW1_06590 PF00330 Aconitase family (aconitate hydratase) TspCOW1_06600 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_06610 PF04356 Protein of unknown function (DUF489) TspCOW1_06630 PF00293 NUDIX domain TspCOW1_06630 PF13344 Haloacid dehalogenase-like hydrolase TspCOW1_06650 PF00180 Isocitrate/isopropylmalate dehydrogenase TspCOW1_06660 PF00313 'Cold-shock' DNA-binding domain TspCOW1_06670 PF02617 ATP-dependent Clp protease adaptor protein ClpS TspCOW1_06680 PF17871 AAA lid domain TspCOW1_06680 PF02861 Clp amino terminal domain, pathogenicity island component TspCOW1_06680 PF07724 AAA domain (Cdc48 subfamily) TspCOW1_06680 PF10431 C-terminal, D2-small domain, of ClpB protein TspCOW1_06680 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_06690 PF01176 Translation initiation factor 1A / IF-1 TspCOW1_06700 PF04376 Arginine-tRNA-protein transferase, N terminus TspCOW1_06700 PF04377 Arginine-tRNA-protein transferase, C terminus TspCOW1_06710 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TspCOW1_06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_06740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TspCOW1_06740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TspCOW1_06750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TspCOW1_06750 PF17854 FtsK alpha domain TspCOW1_06750 PF09397 Ftsk gamma domain TspCOW1_06750 PF01580 FtsK/SpoIIIE family TspCOW1_06760 PF03548 Outer membrane lipoprotein carrier protein LolA TspCOW1_06780 PF16193 AAA C-terminal domain TspCOW1_06780 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_06780 PF12002 MgsA AAA+ ATPase C terminal TspCOW1_06790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TspCOW1_06810 PF02403 Seryl-tRNA synthetase N-terminal domain TspCOW1_06810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TspCOW1_06830 PF07694 5TMR of 5TMR-LYT TspCOW1_06830 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_06860 PF04358 DsrC like protein TspCOW1_06870 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TspCOW1_06870 PF11940 Domain of unknown function (DUF3458) Ig-like fold TspCOW1_06870 PF01433 Peptidase family M1 domain TspCOW1_06890 PF10414 Sirohaem synthase dimerisation region TspCOW1_06890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TspCOW1_06890 PF14824 Sirohaem biosynthesis protein central TspCOW1_06900 PF01381 Helix-turn-helix TspCOW1_06900 PF00717 Peptidase S24-like TspCOW1_06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_06930 PF00128 Alpha amylase, catalytic domain TspCOW1_06950 PF00072 Response regulator receiver domain TspCOW1_06950 PF00196 Bacterial regulatory proteins, luxR family TspCOW1_06960 PF07730 Histidine kinase TspCOW1_06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_06960 PF00672 HAMP domain TspCOW1_06960 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TspCOW1_06980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TspCOW1_06980 PF07685 CobB/CobQ-like glutamine amidotransferase domain TspCOW1_07000 PF13247 4Fe-4S dicluster domain TspCOW1_07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_07020 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TspCOW1_07050 PF04358 DsrC like protein TspCOW1_07070 PF02635 DsrE/DsrF-like family TspCOW1_07080 PF02635 DsrE/DsrF-like family TspCOW1_07090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TspCOW1_07090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TspCOW1_07100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TspCOW1_07100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TspCOW1_07160 PF13640 2OG-Fe(II) oxygenase superfamily TspCOW1_07160 PF18331 PKHD-type hydroxylase C-terminal domain TspCOW1_07190 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_07200 PF01925 Sulfite exporter TauE/SafE TspCOW1_07210 PF00583 Acetyltransferase (GNAT) family TspCOW1_07210 PF09500 Putative thioesterase (yiiD_Cterm) TspCOW1_07260 PF00082 Subtilase family TspCOW1_07260 PF05922 Peptidase inhibitor I9 TspCOW1_07330 PF01027 Inhibitor of apoptosis-promoting Bax1 TspCOW1_07360 PF00574 Clp protease TspCOW1_07470 PF00072 Response regulator receiver domain TspCOW1_07470 PF00158 Sigma-54 interaction domain TspCOW1_07470 PF02954 Bacterial regulatory protein, Fis family TspCOW1_07540 PF00072 Response regulator receiver domain TspCOW1_07540 PF00196 Bacterial regulatory proteins, luxR family TspCOW1_07550 PF03167 Uracil DNA glycosylase superfamily TspCOW1_07560 PF01541 GIY-YIG catalytic domain TspCOW1_07560 PF02151 UvrB/uvrC motif TspCOW1_07560 PF08459 UvrC Helix-hairpin-helix N-terminal TspCOW1_07570 PF01066 CDP-alcohol phosphatidyltransferase TspCOW1_07590 PF00274 Fructose-bisphosphate aldolase class-I TspCOW1_07620 PF01145 SPFH domain / Band 7 family TspCOW1_07630 PF07298 NnrU protein TspCOW1_07640 PF02445 Quinolinate synthetase A protein TspCOW1_07670 PF00924 Mechanosensitive ion channel TspCOW1_07690 PF00676 Dehydrogenase E1 component TspCOW1_07690 PF02779 Transketolase, pyrimidine binding domain TspCOW1_07690 PF16078 2-oxoglutarate dehydrogenase N-terminus TspCOW1_07690 PF16870 2-oxoglutarate dehydrogenase C-terminal TspCOW1_07700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TspCOW1_07700 PF02817 e3 binding domain TspCOW1_07700 PF00364 Biotin-requiring enzyme TspCOW1_07710 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_07710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TspCOW1_07720 PF13194 Domain of unknown function (DUF4010) TspCOW1_07740 PF14306 PUA-like domain TspCOW1_07740 PF01747 ATP-sulfurylase TspCOW1_07780 PF18030 RimK PreATP-grasp domain TspCOW1_07780 PF08443 RimK-like ATP-grasp domain TspCOW1_07790 PF08443 RimK-like ATP-grasp domain TspCOW1_07790 PF18030 RimK PreATP-grasp domain TspCOW1_07800 PF04264 YceI-like domain TspCOW1_07810 PF01292 Prokaryotic cytochrome b561 TspCOW1_07830 PF01661 Macro domain TspCOW1_07890 PF03600 Citrate transporter TspCOW1_07910 PF00916 Sulfate permease family TspCOW1_07910 PF01740 STAS domain TspCOW1_07920 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_07920 PF08521 Two-component sensor kinase N-terminal TspCOW1_07930 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_07930 PF00072 Response regulator receiver domain TspCOW1_07940 PF00266 Aminotransferase class-V TspCOW1_07960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TspCOW1_07960 PF02770 Acyl-CoA dehydrogenase, middle domain TspCOW1_07960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TspCOW1_07960 PF09317 Domain of unknown function (DUF1974) TspCOW1_07970 PF00108 Thiolase, N-terminal domain TspCOW1_07970 PF02803 Thiolase, C-terminal domain TspCOW1_07980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TspCOW1_07980 PF00378 Enoyl-CoA hydratase/isomerase TspCOW1_07980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TspCOW1_07990 PF00501 AMP-binding enzyme TspCOW1_08000 PF03061 Thioesterase superfamily TspCOW1_08020 PF01026 TatD related DNase TspCOW1_08040 PF09115 DNA polymerase III, delta subunit, C terminal TspCOW1_08050 PF02223 Thymidylate kinase TspCOW1_08060 PF00849 RNA pseudouridylate synthase TspCOW1_08070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_08090 PF00285 Citrate synthase, C-terminal domain TspCOW1_08110 PF02618 YceG-like family TspCOW1_08120 PF01063 Amino-transferase class IV TspCOW1_08130 PF04715 Anthranilate synthase component I, N terminal region TspCOW1_08130 PF00425 chorismate binding enzyme TspCOW1_08140 PF02801 Beta-ketoacyl synthase, C-terminal domain TspCOW1_08140 PF00109 Beta-ketoacyl synthase, N-terminal domain TspCOW1_08150 PF00550 Phosphopantetheine attachment site TspCOW1_08170 PF00698 Acyl transferase domain TspCOW1_08180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TspCOW1_08180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TspCOW1_08190 PF02504 Fatty acid synthesis protein TspCOW1_08200 PF01783 Ribosomal L32p protein family TspCOW1_08220 PF00289 Biotin carboxylase, N-terminal domain TspCOW1_08220 PF02785 Biotin carboxylase C-terminal domain TspCOW1_08220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TspCOW1_08240 PF00682 HMGL-like TspCOW1_08240 PF00364 Biotin-requiring enzyme TspCOW1_08240 PF02436 Conserved carboxylase domain TspCOW1_08250 PF02545 Maf-like protein TspCOW1_08270 PF01343 Peptidase family S49 TspCOW1_08270 PF06965 Na+/H+ antiporter 1 TspCOW1_08280 PF13419 Haloacid dehalogenase-like hydrolase TspCOW1_08290 PF00849 RNA pseudouridylate synthase TspCOW1_08290 PF01479 S4 domain TspCOW1_08300 PF10150 Ribonuclease E/G family TspCOW1_08300 PF12111 Polyribonucleotide phosphorylase C terminal TspCOW1_08300 PF00575 S1 RNA binding domain TspCOW1_08310 PF01451 Low molecular weight phosphotyrosine protein phosphatase TspCOW1_08340 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_08340 PF00360 Phytochrome region TspCOW1_08340 PF00563 EAL domain TspCOW1_08340 PF01590 GAF domain TspCOW1_08400 PF02348 Cytidylyltransferase TspCOW1_08410 PF03966 Trm112p-like protein TspCOW1_08420 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TspCOW1_08430 PF00005 ABC transporter TspCOW1_08430 PF00664 ABC transporter transmembrane region TspCOW1_08440 PF02472 Biopolymer transport protein ExbD/TolR TspCOW1_08450 PF01618 MotA/TolQ/ExbB proton channel family TspCOW1_08460 PF00753 Metallo-beta-lactamase superfamily TspCOW1_08460 PF03772 Competence protein TspCOW1_08460 PF13567 Domain of unknown function (DUF4131) TspCOW1_08480 PF00005 ABC transporter TspCOW1_08490 PF02687 FtsX-like permease family TspCOW1_08490 PF12704 MacB-like periplasmic core domain TspCOW1_08520 PF04371 Porphyromonas-type peptidyl-arginine deiminase TspCOW1_08530 PF00795 Carbon-nitrogen hydrolase TspCOW1_08540 PF04055 Radical SAM superfamily TspCOW1_08540 PF06968 Biotin and Thiamin Synthesis associated domain TspCOW1_08540 PF00202 Aminotransferase class-III TspCOW1_08550 PF00793 DAHP synthetase I family TspCOW1_08550 PF18152 DAHP synthase ferredoxin-like domain TspCOW1_08580 PF02954 Bacterial regulatory protein, Fis family TspCOW1_08580 PF00158 Sigma-54 interaction domain TspCOW1_08580 PF01590 GAF domain TspCOW1_08590 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_08610 PF16925 Tetracyclin repressor-like, C-terminal domain TspCOW1_08610 PF00440 Bacterial regulatory proteins, tetR family TspCOW1_08630 PF13686 DsrE/DsrF/DrsH-like family TspCOW1_08670 PF00814 Glycoprotease family TspCOW1_08680 PF04851 Type III restriction enzyme, res subunit TspCOW1_08680 PF13307 Helicase C-terminal domain TspCOW1_08710 PF00905 Penicillin binding protein transpeptidase domain TspCOW1_08710 PF14814 Bifunctional transglycosylase second domain TspCOW1_08710 PF00912 Transglycosylase TspCOW1_08740 PF05724 Thiopurine S-methyltransferase (TPMT) TspCOW1_08750 PF02913 FAD linked oxidases, C-terminal domain TspCOW1_08750 PF01565 FAD binding domain TspCOW1_08760 PF01565 FAD binding domain TspCOW1_08770 PF13183 4Fe-4S dicluster domain TspCOW1_08770 PF02754 Cysteine-rich domain TspCOW1_08780 PF00872 Transposase, Mutator family TspCOW1_08790 PF13183 4Fe-4S dicluster domain TspCOW1_08790 PF02754 Cysteine-rich domain TspCOW1_08870 PF06039 Malate:quinone oxidoreductase (Mqo) TspCOW1_08900 PF03734 L,D-transpeptidase catalytic domain TspCOW1_08900 PF17969 L,D-transpeptidase C-terminal domain TspCOW1_08930 PF00533 BRCA1 C Terminus (BRCT) domain TspCOW1_08930 PF01653 NAD-dependent DNA ligase adenylation domain TspCOW1_08930 PF03120 NAD-dependent DNA ligase OB-fold domain TspCOW1_08930 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TspCOW1_08930 PF12826 Helix-hairpin-helix motif TspCOW1_08940 PF04354 ZipA, C-terminal FtsZ-binding domain TspCOW1_08950 PF02463 RecF/RecN/SMC N terminal domain TspCOW1_08960 PF14489 QueF-like protein TspCOW1_08970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TspCOW1_08990 PF00155 Aminotransferase class I and II TspCOW1_09000 PF13419 Haloacid dehalogenase-like hydrolase TspCOW1_09010 PF01258 Prokaryotic dksA/traR C4-type zinc finger TspCOW1_09020 PF00749 tRNA synthetases class I (E and Q), catalytic domain TspCOW1_09040 PF16177 Acetyl-coenzyme A synthetase N-terminus TspCOW1_09040 PF00501 AMP-binding enzyme TspCOW1_09040 PF13193 AMP-binding enzyme C-terminal domain TspCOW1_09050 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_09050 PF00072 Response regulator receiver domain TspCOW1_09080 PF00575 S1 RNA binding domain TspCOW1_09080 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TspCOW1_09080 PF01138 3' exoribonuclease family, domain 1 TspCOW1_09080 PF03725 3' exoribonuclease family, domain 2 TspCOW1_09080 PF00013 KH domain TspCOW1_09090 PF00312 Ribosomal protein S15 TspCOW1_09100 PF16198 tRNA pseudouridylate synthase B C-terminal domain TspCOW1_09100 PF09157 Pseudouridine synthase II TruB, C-terminal TspCOW1_09100 PF01509 TruB family pseudouridylate synthase (N terminal domain) TspCOW1_09110 PF02033 Ribosome-binding factor A TspCOW1_09120 PF04760 Translation initiation factor IF-2, N-terminal region TspCOW1_09120 PF08364 Bacterial translation initiation factor IF-2 associated region TspCOW1_09120 PF11987 Translation-initiation factor 2 TspCOW1_09120 PF00009 Elongation factor Tu GTP binding domain TspCOW1_09130 PF08529 NusA N-terminal domain TspCOW1_09130 PF13184 NusA-like KH domain TspCOW1_09140 PF17384 RimP C-terminal SH3 domain TspCOW1_09140 PF02576 RimP N-terminal domain TspCOW1_09160 PF00873 AcrB/AcrD/AcrF family TspCOW1_09170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_09180 PF00440 Bacterial regulatory proteins, tetR family TspCOW1_09190 PF02080 TrkA-C domain TspCOW1_09190 PF03600 Citrate transporter TspCOW1_09220 PF00106 short chain dehydrogenase TspCOW1_09230 PF13411 MerR HTH family regulatory protein TspCOW1_09240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase TspCOW1_09240 PF01266 FAD dependent oxidoreductase TspCOW1_09300 PF04357 TamB, inner membrane protein subunit of TAM complex TspCOW1_09310 PF07244 Surface antigen variable number repeat TspCOW1_09310 PF17243 POTRA domain TamA domain 1 TspCOW1_09310 PF01103 Surface antigen TspCOW1_09320 PF05191 Adenylate kinase, active site lid TspCOW1_09340 PF00689 Cation transporting ATPase, C-terminus TspCOW1_09340 PF00690 Cation transporter/ATPase, N-terminus TspCOW1_09350 PF00871 Acetokinase family TspCOW1_09360 PF09364 XFP N-terminal domain TspCOW1_09360 PF09363 XFP C-terminal domain TspCOW1_09360 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase TspCOW1_09400 PF00361 Proton-conducting membrane transporter TspCOW1_09410 PF00361 Proton-conducting membrane transporter TspCOW1_09410 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TspCOW1_09420 PF00361 Proton-conducting membrane transporter TspCOW1_09420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TspCOW1_09430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TspCOW1_09440 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TspCOW1_09450 PF12838 4Fe-4S dicluster domain TspCOW1_09460 PF00146 NADH dehydrogenase TspCOW1_09470 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TspCOW1_09470 PF00384 Molybdopterin oxidoreductase TspCOW1_09470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TspCOW1_09480 PF10531 SLBB domain TspCOW1_09480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TspCOW1_09480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TspCOW1_09500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TspCOW1_09510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TspCOW1_09520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TspCOW1_09530 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TspCOW1_09540 PF03840 Preprotein translocase SecG subunit TspCOW1_09550 PF00121 Triosephosphate isomerase TspCOW1_09560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TspCOW1_09560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TspCOW1_09560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TspCOW1_09560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TspCOW1_09570 PF00809 Pterin binding enzyme TspCOW1_09580 PF17862 AAA+ lid domain TspCOW1_09580 PF06480 FtsH Extracellular TspCOW1_09580 PF01434 Peptidase family M41 TspCOW1_09580 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_09590 PF01728 FtsJ-like methyltransferase TspCOW1_09620 PF03449 Transcription elongation factor, N-terminal TspCOW1_09620 PF01272 Transcription elongation factor, GreA/GreB, C-term TspCOW1_09630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TspCOW1_09630 PF02142 MGS-like domain TspCOW1_09630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TspCOW1_09640 PF00117 Glutamine amidotransferase class-I TspCOW1_09640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TspCOW1_09650 PF01113 Dihydrodipicolinate reductase, N-terminus TspCOW1_09650 PF05173 Dihydrodipicolinate reductase, C-terminus TspCOW1_09660 PF00684 DnaJ central domain TspCOW1_09660 PF01556 DnaJ C terminal domain TspCOW1_09660 PF00226 DnaJ domain TspCOW1_09670 PF00012 Hsp70 protein TspCOW1_09680 PF01025 GrpE TspCOW1_09690 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding TspCOW1_09690 PF01628 HrcA protein C terminal domain TspCOW1_09700 PF01513 ATP-NAD kinase TspCOW1_09710 PF02463 RecF/RecN/SMC N terminal domain TspCOW1_09720 PF01475 Ferric uptake regulator family TspCOW1_09730 PF04355 SmpA / OmlA family TspCOW1_09740 PF03658 RnfH family Ubiquitin TspCOW1_09750 PF03364 Polyketide cyclase / dehydrase and lipid transport TspCOW1_09760 PF00209 Sodium:neurotransmitter symporter family TspCOW1_09770 PF01668 SmpB protein TspCOW1_09790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TspCOW1_09810 PF00890 FAD binding domain TspCOW1_09820 PF13187 4Fe-4S dicluster domain TspCOW1_09820 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit TspCOW1_09840 PF08411 Exonuclease C-terminal TspCOW1_09840 PF00929 Exonuclease TspCOW1_09870 PF08411 Exonuclease C-terminal TspCOW1_09870 PF00929 Exonuclease TspCOW1_09880 PF08448 PAS fold TspCOW1_09880 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_09910 PF03971 Monomeric isocitrate dehydrogenase TspCOW1_09920 PF01699 Sodium/calcium exchanger protein TspCOW1_09960 PF10417 C-terminal domain of 1-Cys peroxiredoxin TspCOW1_09960 PF00578 AhpC/TSA family TspCOW1_10000 PF01384 Phosphate transporter family TspCOW1_10010 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_10010 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_10010 PF00563 EAL domain TspCOW1_10020 PF00085 Thioredoxin TspCOW1_10030 PF13847 Methyltransferase domain TspCOW1_10050 PF00535 Glycosyl transferase family 2 TspCOW1_10070 PF09335 SNARE associated Golgi protein TspCOW1_10160 PF00141 Peroxidase TspCOW1_10200 PF17755 UvrA DNA-binding domain TspCOW1_10200 PF17760 UvrA interaction domain TspCOW1_10200 PF00005 ABC transporter TspCOW1_10250 PF08241 Methyltransferase domain TspCOW1_10260 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TspCOW1_10260 PF05221 S-adenosyl-L-homocysteine hydrolase TspCOW1_10290 PF00535 Glycosyl transferase family 2 TspCOW1_10320 PF00034 Cytochrome c TspCOW1_10330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_10350 PF00271 Helicase conserved C-terminal domain TspCOW1_10350 PF16124 RecQ zinc-binding TspCOW1_10350 PF09382 RQC domain TspCOW1_10350 PF00570 HRDC domain TspCOW1_10350 PF00270 DEAD/DEAH box helicase TspCOW1_10360 PF10017 Histidine-specific methyltransferase, SAM-dependent TspCOW1_10370 PF12867 DinB superfamily TspCOW1_10370 PF03781 Sulfatase-modifying factor enzyme 1 TspCOW1_10380 PF00472 RF-1 domain TspCOW1_10410 PF00313 'Cold-shock' DNA-binding domain TspCOW1_10460 PF00561 alpha/beta hydrolase fold TspCOW1_10480 PF00266 Aminotransferase class-V TspCOW1_10490 PF00082 Subtilase family TspCOW1_10490 PF04151 Bacterial pre-peptidase C-terminal domain TspCOW1_10500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TspCOW1_10500 PF00005 ABC transporter TspCOW1_10510 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_10510 PF12911 N-terminal TM domain of oligopeptide transport permease C TspCOW1_10520 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_10550 PF00375 Sodium:dicarboxylate symporter family TspCOW1_10560 PF13145 PPIC-type PPIASE domain TspCOW1_10570 PF00216 Bacterial DNA-binding protein TspCOW1_10580 PF05362 Lon protease (S16) C-terminal proteolytic domain TspCOW1_10580 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_10580 PF02190 ATP-dependent protease La (LON) substrate-binding domain TspCOW1_10590 PF07724 AAA domain (Cdc48 subfamily) TspCOW1_10590 PF10431 C-terminal, D2-small domain, of ClpB protein TspCOW1_10590 PF06689 ClpX C4-type zinc finger TspCOW1_10600 PF00574 Clp protease TspCOW1_10610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TspCOW1_10610 PF05697 Bacterial trigger factor protein (TF) TspCOW1_10610 PF05698 Bacterial trigger factor protein (TF) C-terminus TspCOW1_10620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TspCOW1_10620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TspCOW1_10630 PF08448 PAS fold TspCOW1_10630 PF00563 EAL domain TspCOW1_10630 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_10650 PF01406 tRNA synthetases class I (C) catalytic domain TspCOW1_10650 PF09190 DALR domain TspCOW1_10660 PF00749 tRNA synthetases class I (E and Q), catalytic domain TspCOW1_10680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TspCOW1_10690 PF00149 Calcineurin-like phosphoesterase TspCOW1_10720 PF04305 Protein of unknown function (DUF455) TspCOW1_10730 PF05161 MOFRL family TspCOW1_10730 PF13660 Domain of unknown function (DUF4147) TspCOW1_10750 PF01053 Cys/Met metabolism PLP-dependent enzyme TspCOW1_10760 PF00156 Phosphoribosyl transferase domain TspCOW1_10790 PF08245 Mur ligase middle domain TspCOW1_10790 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_10800 PF01039 Carboxyl transferase domain TspCOW1_10800 PF17848 Acetyl-coA carboxylase zinc finger domain TspCOW1_10810 PF00290 Tryptophan synthase alpha chain TspCOW1_10820 PF00291 Pyridoxal-phosphate dependent enzyme TspCOW1_10830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TspCOW1_10840 PF01416 tRNA pseudouridine synthase TspCOW1_10900 PF02774 Semialdehyde dehydrogenase, dimerisation domain TspCOW1_10900 PF01118 Semialdehyde dehydrogenase, NAD binding domain TspCOW1_10910 PF00180 Isocitrate/isopropylmalate dehydrogenase TspCOW1_10920 PF00694 Aconitase C-terminal domain TspCOW1_10930 PF00330 Aconitase family (aconitate hydratase) TspCOW1_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_10960 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_10960 PF00563 EAL domain TspCOW1_10960 PF08448 PAS fold TspCOW1_10970 PF01791 DeoC/LacD family aldolase TspCOW1_10990 PF00072 Response regulator receiver domain TspCOW1_11000 PF01264 Chorismate synthase TspCOW1_11020 PF04055 Radical SAM superfamily TspCOW1_11020 PF06969 HemN C-terminal domain TspCOW1_11030 PF05175 Methyltransferase small domain TspCOW1_11040 PF02630 SCO1/SenC TspCOW1_11060 PF02666 Phosphatidylserine decarboxylase TspCOW1_11070 PF00459 Inositol monophosphatase family TspCOW1_11110 PF07549 SecD/SecF GG Motif TspCOW1_11110 PF02355 Protein export membrane protein TspCOW1_11120 PF02355 Protein export membrane protein TspCOW1_11120 PF07549 SecD/SecF GG Motif TspCOW1_11120 PF13721 SecD export protein N-terminal TM region TspCOW1_11130 PF02699 Preprotein translocase subunit TspCOW1_11140 PF01702 Queuine tRNA-ribosyltransferase TspCOW1_11150 PF02547 Queuosine biosynthesis protein TspCOW1_11160 PF00343 Carbohydrate phosphorylase TspCOW1_11160 PF11897 Protein of unknown function (DUF3417) TspCOW1_11170 PF02446 4-alpha-glucanotransferase TspCOW1_11190 PF00483 Nucleotidyl transferase TspCOW1_11200 PF00128 Alpha amylase, catalytic domain TspCOW1_11200 PF02806 Alpha amylase, C-terminal all-beta domain TspCOW1_11200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TspCOW1_11230 PF04055 Radical SAM superfamily TspCOW1_11240 PF01875 Memo-like protein TspCOW1_11250 PF01871 AMMECR1 TspCOW1_11250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TspCOW1_11310 PF01312 FlhB HrpN YscU SpaS Family TspCOW1_11350 PF01584 CheW-like domain TspCOW1_11380 PF13614 AAA domain TspCOW1_11390 PF00072 Response regulator receiver domain TspCOW1_11390 PF01339 CheB methylesterase TspCOW1_11400 PF01627 Hpt domain TspCOW1_11400 PF02895 Signal transducing histidine kinase, homodimeric domain TspCOW1_11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_11400 PF01584 CheW-like domain TspCOW1_11400 PF00072 Response regulator receiver domain TspCOW1_11410 PF04344 Chemotaxis phosphatase, CheZ TspCOW1_11420 PF00072 Response regulator receiver domain TspCOW1_11430 PF04542 Sigma-70 region 2 TspCOW1_11430 PF04539 Sigma-70 region 3 TspCOW1_11430 PF04545 Sigma-70, region 4 TspCOW1_11440 PF10609 NUBPL iron-transfer P-loop NTPase TspCOW1_11450 PF00448 SRP54-type protein, GTPase domain TspCOW1_11460 PF00771 FHIPEP family TspCOW1_11470 PF01312 FlhB HrpN YscU SpaS Family TspCOW1_11480 PF01311 Bacterial export proteins, family 1 TspCOW1_11490 PF01313 Bacterial export proteins, family 3 TspCOW1_11500 PF00813 FliP family TspCOW1_11510 PF04347 Flagellar biosynthesis protein, FliO TspCOW1_11520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TspCOW1_11530 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TspCOW1_11530 PF02154 Flagellar motor switch protein FliM TspCOW1_11550 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) TspCOW1_11570 PF00270 DEAD/DEAH box helicase TspCOW1_11570 PF00271 Helicase conserved C-terminal domain TspCOW1_11580 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TspCOW1_11650 PF02899 Phage integrase, N-terminal SAM-like domain TspCOW1_11650 PF00589 Phage integrase family TspCOW1_11680 PF00563 EAL domain TspCOW1_11680 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_11680 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_11710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_11710 PF18269 T3SS EscN ATPase C-terminal domain TspCOW1_11720 PF02108 Flagellar assembly protein FliH TspCOW1_11730 PF14841 FliG middle domain TspCOW1_11730 PF14842 FliG N-terminal domain TspCOW1_11730 PF01706 FliG C-terminal domain TspCOW1_11740 PF08345 Flagellar M-ring protein C-terminal TspCOW1_11740 PF01514 Secretory protein of YscJ/FliF family TspCOW1_11750 PF02049 Flagellar hook-basal body complex protein FliE TspCOW1_11760 PF00158 Sigma-54 interaction domain TspCOW1_11760 PF02954 Bacterial regulatory protein, Fis family TspCOW1_11760 PF00072 Response regulator receiver domain TspCOW1_11770 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_11770 PF13188 PAS domain TspCOW1_11780 PF02954 Bacterial regulatory protein, Fis family TspCOW1_11780 PF00158 Sigma-54 interaction domain TspCOW1_11780 PF06490 Flagellar regulatory protein FleQ TspCOW1_11810 PF02561 Flagellar protein FliS TspCOW1_11820 PF07195 Flagellar hook-associated protein 2 C-terminus TspCOW1_11820 PF02465 Flagellar hook-associated protein 2 N-terminus TspCOW1_11850 PF00669 Bacterial flagellin N-terminal helical region TspCOW1_11850 PF07196 Flagellin hook IN motif TspCOW1_11850 PF00700 Bacterial flagellin C-terminal helical region TspCOW1_11860 PF00563 EAL domain TspCOW1_11860 PF08448 PAS fold TspCOW1_11860 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_11880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TspCOW1_11880 PF00460 Flagella basal body rod protein TspCOW1_11890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TspCOW1_11890 PF10135 Rod binding protein TspCOW1_11900 PF02119 Flagellar P-ring protein TspCOW1_11910 PF02107 Flagellar L-ring protein TspCOW1_11920 PF00460 Flagella basal body rod protein TspCOW1_11920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TspCOW1_11930 PF00460 Flagella basal body rod protein TspCOW1_11930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TspCOW1_11940 PF07559 Flagellar basal body protein FlaE TspCOW1_11940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TspCOW1_11940 PF00460 Flagella basal body rod protein TspCOW1_11950 PF13860 FlgD Ig-like domain TspCOW1_11950 PF13861 FlgD Tudor-like domain TspCOW1_11950 PF03963 Flagellar hook capping protein - N-terminal region TspCOW1_11960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TspCOW1_11960 PF00460 Flagella basal body rod protein TspCOW1_11970 PF00460 Flagella basal body rod protein TspCOW1_11980 PF03705 CheR methyltransferase, all-alpha domain TspCOW1_11980 PF01739 CheR methyltransferase, SAM binding domain TspCOW1_11990 PF01584 CheW-like domain TspCOW1_11990 PF00072 Response regulator receiver domain TspCOW1_12000 PF13144 Chaperone for flagella basal body P-ring formation TspCOW1_12040 PF00654 Voltage gated chloride channel TspCOW1_12050 PF00072 Response regulator receiver domain TspCOW1_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_12060 PF00672 HAMP domain TspCOW1_12060 PF17149 Periplasmic sensor domain found in signal transduction proteins TspCOW1_12060 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_12060 PF00072 Response regulator receiver domain TspCOW1_12060 PF01627 Hpt domain TspCOW1_12080 PF02824 TGS domain TspCOW1_12080 PF04607 Region found in RelA / SpoT proteins TspCOW1_12080 PF13291 ACT domain TspCOW1_12120 PF00005 ABC transporter TspCOW1_12130 PF02405 Permease MlaE TspCOW1_12140 PF01740 STAS domain TspCOW1_12180 PF00149 Calcineurin-like phosphoesterase TspCOW1_12210 PF04055 Radical SAM superfamily TspCOW1_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_12220 PF01627 Hpt domain TspCOW1_12220 PF00072 Response regulator receiver domain TspCOW1_12220 PF00497 Bacterial extracellular solute-binding proteins, family 3 TspCOW1_12220 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_12270 PF01625 Peptide methionine sulfoxide reductase TspCOW1_12290 PF03441 FAD binding domain of DNA photolyase TspCOW1_12290 PF00875 DNA photolyase TspCOW1_12300 PF00970 Oxidoreductase FAD-binding domain TspCOW1_12300 PF00175 Oxidoreductase NAD-binding domain TspCOW1_12320 PF00899 ThiF family TspCOW1_12350 PF01137 RNA 3'-terminal phosphate cyclase TspCOW1_12350 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain TspCOW1_12360 PF03449 Transcription elongation factor, N-terminal TspCOW1_12360 PF01272 Transcription elongation factor, GreA/GreB, C-term TspCOW1_12380 PF00005 ABC transporter TspCOW1_12390 PF01061 ABC-2 type transporter TspCOW1_12400 PF00293 NUDIX domain TspCOW1_12420 PF14403 Circularly permuted ATP-grasp type 2 TspCOW1_12440 PF15887 Putative zinc-binding metallo-peptidase TspCOW1_12440 PF10005 zinc-ribbon domain TspCOW1_12600 PF01121 Dephospho-CoA kinase TspCOW1_12640 PF00872 Transposase, Mutator family TspCOW1_12670 PF00589 Phage integrase family TspCOW1_12670 PF02899 Phage integrase, N-terminal SAM-like domain TspCOW1_12870 PF00176 SNF2 family N-terminal domain TspCOW1_12870 PF00271 Helicase conserved C-terminal domain TspCOW1_12880 PF00580 UvrD/REP helicase N-terminal domain TspCOW1_12880 PF13361 UvrD-like helicase C-terminal domain TspCOW1_12890 PF00270 DEAD/DEAH box helicase TspCOW1_12890 PF09369 Domain of unknown function (DUF1998) TspCOW1_12890 PF00271 Helicase conserved C-terminal domain TspCOW1_12960 PF00271 Helicase conserved C-terminal domain TspCOW1_12960 PF00176 SNF2 family N-terminal domain TspCOW1_13030 PF03747 ADP-ribosylglycohydrolase TspCOW1_13130 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TspCOW1_13130 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TspCOW1_13140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TspCOW1_13140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TspCOW1_13150 PF00571 CBS domain TspCOW1_13150 PF01743 Poly A polymerase head domain TspCOW1_13170 PF00034 Cytochrome c TspCOW1_13180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_13190 PF13649 Methyltransferase domain TspCOW1_13260 PF01618 MotA/TolQ/ExbB proton channel family TspCOW1_13270 PF02472 Biopolymer transport protein ExbD/TolR TspCOW1_13340 PF00781 Diacylglycerol kinase catalytic domain TspCOW1_13420 PF03279 Bacterial lipid A biosynthesis acyltransferase TspCOW1_13460 PF00664 ABC transporter transmembrane region TspCOW1_13460 PF00005 ABC transporter TspCOW1_13500 PF00155 Aminotransferase class I and II TspCOW1_13510 PF00550 Phosphopantetheine attachment site TspCOW1_13530 PF00550 Phosphopantetheine attachment site TspCOW1_13530 PF02801 Beta-ketoacyl synthase, C-terminal domain TspCOW1_13530 PF00202 Aminotransferase class-III TspCOW1_13530 PF00501 AMP-binding enzyme TspCOW1_13530 PF00109 Beta-ketoacyl synthase, N-terminal domain TspCOW1_13530 PF00668 Condensation domain TspCOW1_13530 PF16197 Ketoacyl-synthetase C-terminal extension TspCOW1_13530 PF13193 AMP-binding enzyme C-terminal domain TspCOW1_13540 PF00082 Subtilase family TspCOW1_13560 PF03466 LysR substrate binding domain TspCOW1_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_13570 PF04358 DsrC like protein TspCOW1_13580 PF00571 CBS domain TspCOW1_13580 PF00478 IMP dehydrogenase / GMP reductase domain TspCOW1_13590 PF00497 Bacterial extracellular solute-binding proteins, family 3 TspCOW1_13590 PF01464 Transglycosylase SLT domain TspCOW1_13600 PF14437 MafB19-like deaminase TspCOW1_13630 PF00753 Metallo-beta-lactamase superfamily TspCOW1_13630 PF16123 Hydroxyacylglutathione hydrolase C-terminus TspCOW1_13650 PF00155 Aminotransferase class I and II TspCOW1_13660 PF08241 Methyltransferase domain TspCOW1_13690 PF02535 ZIP Zinc transporter TspCOW1_13700 PF02675 S-adenosylmethionine decarboxylase TspCOW1_13710 PF00403 Heavy-metal-associated domain TspCOW1_13770 PF00873 AcrB/AcrD/AcrF family TspCOW1_13810 PF07690 Major Facilitator Superfamily TspCOW1_13830 PF00005 ABC transporter TspCOW1_13840 PF00005 ABC transporter TspCOW1_13850 PF13533 Biotin-lipoyl like TspCOW1_13890 PF00873 AcrB/AcrD/AcrF family TspCOW1_13900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_13900 PF00529 HlyD membrane-fusion protein of T1SS TspCOW1_14000 PF00403 Heavy-metal-associated domain TspCOW1_14010 PF01022 Bacterial regulatory protein, arsR family TspCOW1_14130 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB TspCOW1_14140 PF00117 Glutamine amidotransferase class-I TspCOW1_14140 PF00958 GMP synthase C terminal domain TspCOW1_14140 PF02540 NAD synthase TspCOW1_14150 PF00571 CBS domain TspCOW1_14150 PF00478 IMP dehydrogenase / GMP reductase domain TspCOW1_14160 PF02601 Exonuclease VII, large subunit TspCOW1_14160 PF13742 OB-fold nucleic acid binding domain TspCOW1_14170 PF01476 LysM domain TspCOW1_14170 PF01551 Peptidase family M23 TspCOW1_14180 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_14180 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_14180 PF00563 EAL domain TspCOW1_14190 PF01180 Dihydroorotate dehydrogenase TspCOW1_14200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TspCOW1_14200 PF10371 Domain of unknown function TspCOW1_14200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TspCOW1_14200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TspCOW1_14200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TspCOW1_14210 PF13472 GDSL-like Lipase/Acylhydrolase family TspCOW1_14220 PF00005 ABC transporter TspCOW1_14240 PF00916 Sulfate permease family TspCOW1_14240 PF01740 STAS domain TspCOW1_14250 PF01926 50S ribosome-binding GTPase TspCOW1_14250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TspCOW1_14260 PF13360 PQQ-like domain TspCOW1_14280 PF13393 Histidyl-tRNA synthetase TspCOW1_14280 PF03129 Anticodon binding domain TspCOW1_14290 PF13464 Domain of unknown function (DUF4115) TspCOW1_14310 PF04055 Radical SAM superfamily TspCOW1_14320 PF00334 Nucleoside diphosphate kinase TspCOW1_14330 PF04384 Iron-sulphur cluster assembly TspCOW1_14340 PF02082 Transcriptional regulator TspCOW1_14350 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_14360 PF00588 SpoU rRNA Methylase family TspCOW1_14390 PF00005 ABC transporter TspCOW1_14400 PF02405 Permease MlaE TspCOW1_14410 PF00152 tRNA synthetases class II (D, K and N) TspCOW1_14420 PF08207 Elongation factor P (EF-P) KOW-like domain TspCOW1_14420 PF09285 Elongation factor P, C-terminal TspCOW1_14420 PF01132 Elongation factor P (EF-P) OB domain TspCOW1_14430 PF04055 Radical SAM superfamily TspCOW1_14460 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_14460 PF08448 PAS fold TspCOW1_14460 PF00563 EAL domain TspCOW1_14480 PF01435 Peptidase family M48 TspCOW1_14490 PF00211 Adenylate and Guanylate cyclase catalytic domain TspCOW1_14510 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_14510 PF00563 EAL domain TspCOW1_14510 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_14550 PF00521 DNA gyrase/topoisomerase IV, subunit A TspCOW1_14550 PF03989 DNA gyrase C-terminal domain, beta-propeller TspCOW1_14560 PF00986 DNA gyrase B subunit, carboxyl terminus TspCOW1_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_14560 PF01751 Toprim domain TspCOW1_14560 PF00204 DNA gyrase B TspCOW1_14600 PF02915 Rubrerythrin TspCOW1_14610 PF00141 Peroxidase TspCOW1_14620 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) TspCOW1_14620 PF06594 Haemolysin-type calcium binding protein related domain TspCOW1_14650 PF00664 ABC transporter transmembrane region TspCOW1_14650 PF03412 Peptidase C39 family TspCOW1_14650 PF00005 ABC transporter TspCOW1_14670 PF02609 Exonuclease VII small subunit TspCOW1_14680 PF00348 Polyprenyl synthetase TspCOW1_14690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TspCOW1_14690 PF02779 Transketolase, pyrimidine binding domain TspCOW1_14690 PF02780 Transketolase, C-terminal domain TspCOW1_14700 PF01242 6-pyruvoyl tetrahydropterin synthase TspCOW1_14710 PF02649 Type I GTP cyclohydrolase folE2 TspCOW1_14730 PF04608 Phosphatidylglycerophosphatase A TspCOW1_14740 PF02769 AIR synthase related protein, C-terminal domain TspCOW1_14740 PF00586 AIR synthase related protein, N-terminal domain TspCOW1_14750 PF01029 NusB family TspCOW1_14760 PF00885 6,7-dimethyl-8-ribityllumazine synthase TspCOW1_14770 PF00925 GTP cyclohydrolase II TspCOW1_14770 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TspCOW1_14780 PF00677 Lumazine binding domain TspCOW1_14790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TspCOW1_14790 PF01872 RibD C-terminal domain TspCOW1_14800 PF03477 ATP cone domain TspCOW1_14810 PF00464 Serine hydroxymethyltransferase TspCOW1_14830 PF12848 ABC transporter TspCOW1_14830 PF00005 ABC transporter TspCOW1_14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_14840 PF03466 LysR substrate binding domain TspCOW1_14860 PF01794 Ferric reductase like transmembrane component TspCOW1_14880 PF00174 Oxidoreductase molybdopterin binding domain TspCOW1_14890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TspCOW1_14890 PF02769 AIR synthase related protein, C-terminal domain TspCOW1_14890 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal TspCOW1_14900 PF00753 Metallo-beta-lactamase superfamily TspCOW1_14910 PF06804 NlpB/DapX lipoprotein TspCOW1_14920 PF00701 Dihydrodipicolinate synthetase family TspCOW1_14940 PF01842 ACT domain TspCOW1_14950 PF00578 AhpC/TSA family TspCOW1_14960 PF13638 PIN domain TspCOW1_14960 PF02562 PhoH-like protein TspCOW1_14970 PF01594 AI-2E family transporter TspCOW1_14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_14990 PF03466 LysR substrate binding domain TspCOW1_15000 PF00873 AcrB/AcrD/AcrF family TspCOW1_15010 PF13533 Biotin-lipoyl like TspCOW1_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_15020 PF16591 Helical bimodular sensor domain TspCOW1_15020 PF00672 HAMP domain TspCOW1_15030 PF12729 Four helix bundle sensory module for signal transduction TspCOW1_15030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_15030 PF00672 HAMP domain TspCOW1_15060 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TspCOW1_15070 PF01206 Sulfurtransferase TusA TspCOW1_15080 PF00581 Rhodanese-like domain TspCOW1_15090 PF13181 Tetratricopeptide repeat TspCOW1_15090 PF01435 Peptidase family M48 TspCOW1_15140 PF02872 5'-nucleotidase, C-terminal domain TspCOW1_15140 PF00149 Calcineurin-like phosphoesterase TspCOW1_15150 PF00753 Metallo-beta-lactamase superfamily TspCOW1_15170 PF00593 TonB dependent receptor TspCOW1_15170 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_15210 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_15210 PF07660 Secretin and TonB N terminus short domain TspCOW1_15210 PF00593 TonB dependent receptor TspCOW1_15240 PF01717 Cobalamin-independent synthase, Catalytic domain TspCOW1_15240 PF08267 Cobalamin-independent synthase, N-terminal domain TspCOW1_15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_15250 PF03466 LysR substrate binding domain TspCOW1_15260 PF02867 Ribonucleotide reductase, barrel domain TspCOW1_15260 PF03477 ATP cone domain TspCOW1_15260 PF00317 Ribonucleotide reductase, all-alpha domain TspCOW1_15270 PF00268 Ribonucleotide reductase, small chain TspCOW1_15280 PF00664 ABC transporter transmembrane region TspCOW1_15280 PF00005 ABC transporter TspCOW1_15300 PF00005 ABC transporter TspCOW1_15310 PF01032 FecCD transport family TspCOW1_15320 PF01497 Periplasmic binding protein TspCOW1_15330 PF01243 Pyridoxamine 5'-phosphate oxidase TspCOW1_15350 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_15350 PF00593 TonB dependent receptor TspCOW1_15360 PF18496 Collagenase G catalytic helper subdomain TspCOW1_15360 PF01752 Collagenase TspCOW1_15360 PF08453 Peptidase family M9 N-terminal TspCOW1_15410 PF00210 Ferritin-like domain TspCOW1_15420 PF00300 Histidine phosphatase superfamily (branch 1) TspCOW1_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_15430 PF03466 LysR substrate binding domain TspCOW1_15520 PF02322 Cytochrome bd terminal oxidase subunit II TspCOW1_15530 PF01654 Cytochrome bd terminal oxidase subunit I TspCOW1_15570 PF16123 Hydroxyacylglutathione hydrolase C-terminus TspCOW1_15570 PF00753 Metallo-beta-lactamase superfamily TspCOW1_15580 PF00072 Response regulator receiver domain TspCOW1_15580 PF00158 Sigma-54 interaction domain TspCOW1_15580 PF02954 Bacterial regulatory protein, Fis family TspCOW1_15600 PF06508 Queuosine biosynthesis protein QueC TspCOW1_15610 PF04055 Radical SAM superfamily TspCOW1_15620 PF16331 TolA binding protein trimerisation TspCOW1_15630 PF00691 OmpA family TspCOW1_15640 PF04052 TolB amino-terminal domain TspCOW1_15640 PF07676 WD40-like Beta Propeller Repeat TspCOW1_15660 PF02472 Biopolymer transport protein ExbD/TolR TspCOW1_15670 PF01618 MotA/TolQ/ExbB proton channel family TspCOW1_15680 PF03061 Thioesterase superfamily TspCOW1_15690 PF05496 Holliday junction DNA helicase RuvB P-loop domain TspCOW1_15690 PF05491 RuvB C-terminal winged helix domain TspCOW1_15690 PF17864 RuvB AAA lid domain TspCOW1_15700 PF07499 RuvA, C-terminal domain TspCOW1_15700 PF01330 RuvA N terminal domain TspCOW1_15710 PF02075 Crossover junction endodeoxyribonuclease RuvC TspCOW1_15720 PF01709 Transcriptional regulator TspCOW1_15740 PF00293 NUDIX domain TspCOW1_15750 PF01551 Peptidase family M23 TspCOW1_15750 PF10145 Phage-related minor tail protein TspCOW1_15750 PF01464 Transglycosylase SLT domain TspCOW1_15760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TspCOW1_15760 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus TspCOW1_15760 PF00361 Proton-conducting membrane transporter TspCOW1_15780 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) TspCOW1_15800 PF01938 TRAM domain TspCOW1_15800 PF05958 tRNA (Uracil-5-)-methyltransferase TspCOW1_15840 PF00291 Pyridoxal-phosphate dependent enzyme TspCOW1_15850 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_15850 PF00593 TonB dependent receptor TspCOW1_15870 PF00672 HAMP domain TspCOW1_15870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_15870 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_15870 PF01627 Hpt domain TspCOW1_15870 PF00072 Response regulator receiver domain TspCOW1_15870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TspCOW1_15880 PF01648 4'-phosphopantetheinyl transferase superfamily TspCOW1_15890 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TspCOW1_15900 PF02565 Recombination protein O C terminal TspCOW1_15900 PF11967 Recombination protein O N terminal TspCOW1_15910 PF01926 50S ribosome-binding GTPase TspCOW1_15910 PF07650 KH domain TspCOW1_15920 PF00035 Double-stranded RNA binding motif TspCOW1_15920 PF14622 Ribonuclease-III-like TspCOW1_15940 PF10502 Signal peptidase, peptidase S26 TspCOW1_15950 PF06421 GTP-binding protein LepA C-terminus TspCOW1_15950 PF00009 Elongation factor Tu GTP binding domain TspCOW1_15950 PF00679 Elongation factor G C-terminus TspCOW1_15970 PF13180 PDZ domain TspCOW1_15990 PF03888 MucB/RseB N-terminal domain TspCOW1_15990 PF17188 MucB/RseB C-terminal domain TspCOW1_16010 PF08281 Sigma-70, region 4 TspCOW1_16010 PF04542 Sigma-70 region 2 TspCOW1_16020 PF02910 Fumarate reductase flavoprotein C-term TspCOW1_16020 PF00890 FAD binding domain TspCOW1_16030 PF00708 Acylphosphatase TspCOW1_16040 PF13533 Biotin-lipoyl like TspCOW1_16070 PF00578 AhpC/TSA family TspCOW1_16110 PF03960 ArsC family TspCOW1_16120 PF03358 NADPH-dependent FMN reductase TspCOW1_16140 PF00308 Bacterial dnaA protein TspCOW1_16150 PF01594 AI-2E family transporter TspCOW1_16160 PF01066 CDP-alcohol phosphatidyltransferase TspCOW1_16180 PF02769 AIR synthase related protein, C-terminal domain TspCOW1_16180 PF00586 AIR synthase related protein, N-terminal domain TspCOW1_16190 PF00551 Formyl transferase TspCOW1_16210 PF00155 Aminotransferase class I and II TspCOW1_16220 PF00815 Histidinol dehydrogenase TspCOW1_16230 PF01634 ATP phosphoribosyltransferase TspCOW1_16240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TspCOW1_16250 PF01722 BolA-like protein TspCOW1_16260 PF13466 STAS domain TspCOW1_16270 PF02470 MlaD protein TspCOW1_16280 PF02405 Permease MlaE TspCOW1_16290 PF00005 ABC transporter TspCOW1_16310 PF01699 Sodium/calcium exchanger protein TspCOW1_16330 PF01380 SIS domain TspCOW1_16330 PF00571 CBS domain TspCOW1_16360 PF03968 OstA-like protein TspCOW1_16370 PF12399 Branched-chain amino acid ATP-binding cassette transporter TspCOW1_16370 PF00005 ABC transporter TspCOW1_16380 PF04552 Sigma-54, DNA binding domain TspCOW1_16380 PF00309 Sigma-54 factor, Activator interacting domain (AID) TspCOW1_16380 PF04963 Sigma-54 factor, core binding domain TspCOW1_16390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TspCOW1_16400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TspCOW1_16410 PF07475 HPr Serine kinase C-terminal domain TspCOW1_16410 PF02603 HPr Serine kinase N terminus TspCOW1_16420 PF03668 P-loop ATPase protein family TspCOW1_16440 PF00381 PTS HPr component phosphorylation site TspCOW1_16450 PF00391 PEP-utilising enzyme, mobile domain TspCOW1_16450 PF05524 PEP-utilising enzyme, N-terminal TspCOW1_16450 PF02896 PEP-utilising enzyme, TIM barrel domain TspCOW1_16460 PF03448 MgtE intracellular N domain TspCOW1_16460 PF01769 Divalent cation transporter TspCOW1_16460 PF00571 CBS domain TspCOW1_16480 PF00753 Metallo-beta-lactamase superfamily TspCOW1_16480 PF16123 Hydroxyacylglutathione hydrolase C-terminus TspCOW1_16490 PF00291 Pyridoxal-phosphate dependent enzyme TspCOW1_16510 PF01523 Putative modulator of DNA gyrase TspCOW1_16530 PF04751 Protein of unknown function (DUF615) TspCOW1_16550 PF00689 Cation transporting ATPase, C-terminus TspCOW1_16550 PF00690 Cation transporter/ATPase, N-terminus TspCOW1_16590 PF00893 Small Multidrug Resistance protein TspCOW1_16600 PF01523 Putative modulator of DNA gyrase TspCOW1_16610 PF00795 Carbon-nitrogen hydrolase TspCOW1_16630 PF13116 Protein of unknown function TspCOW1_16630 PF13502 AsmA-like C-terminal region TspCOW1_16640 PF10150 Ribonuclease E/G family TspCOW1_16640 PF00575 S1 RNA binding domain TspCOW1_16650 PF02545 Maf-like protein TspCOW1_16660 PF02590 Predicted SPOUT methyltransferase TspCOW1_16680 PF00171 Aldehyde dehydrogenase family TspCOW1_16690 PF14840 Processivity clamp loader gamma complex DNA pol III C-term TspCOW1_16690 PF06144 DNA polymerase III, delta subunit TspCOW1_16710 PF13603 Leucyl-tRNA synthetase, Domain 2 TspCOW1_16710 PF00133 tRNA synthetases class I (I, L, M and V) TspCOW1_16710 PF08264 Anticodon-binding domain of tRNA TspCOW1_16740 PF00795 Carbon-nitrogen hydrolase TspCOW1_16750 PF03471 Transporter associated domain TspCOW1_16750 PF00571 CBS domain TspCOW1_16760 PF02130 Uncharacterized protein family UPF0054 TspCOW1_16770 PF02562 PhoH-like protein TspCOW1_16780 PF01938 TRAM domain TspCOW1_16780 PF00919 Uncharacterized protein family UPF0004 TspCOW1_16780 PF04055 Radical SAM superfamily TspCOW1_16800 PF00342 Phosphoglucose isomerase TspCOW1_16810 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TspCOW1_16810 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TspCOW1_16820 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TspCOW1_16820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TspCOW1_16830 PF08323 Starch synthase catalytic domain TspCOW1_16830 PF00534 Glycosyl transferases group 1 TspCOW1_16840 PF00311 Phosphoenolpyruvate carboxylase TspCOW1_16860 PF00692 dUTPase TspCOW1_16870 PF10609 NUBPL iron-transfer P-loop NTPase TspCOW1_16880 PF09334 tRNA synthetases class I (M) TspCOW1_16880 PF01588 Putative tRNA binding domain TspCOW1_16890 PF02508 Rnf-Nqr subunit, membrane protein TspCOW1_16900 PF04060 Putative Fe-S cluster TspCOW1_16910 PF12838 4Fe-4S dicluster domain TspCOW1_16910 PF10531 SLBB domain TspCOW1_16910 PF13375 RnfC Barrel sandwich hybrid domain TspCOW1_16910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TspCOW1_16920 PF03116 NQR2, RnfD, RnfE family TspCOW1_16930 PF04205 FMN-binding domain TspCOW1_16940 PF02508 Rnf-Nqr subunit, membrane protein TspCOW1_16950 PF08448 PAS fold TspCOW1_16950 PF00563 EAL domain TspCOW1_16950 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_16960 PF00730 HhH-GPD superfamily base excision DNA repair protein TspCOW1_16960 PF00633 Helix-hairpin-helix motif TspCOW1_16960 PF10576 Iron-sulfur binding domain of endonuclease III TspCOW1_16980 PF05114 Protein of unknown function (DUF692) TspCOW1_17000 PF07681 DoxX TspCOW1_17010 PF02541 Ppx/GppA phosphatase family TspCOW1_17030 PF12849 PBP superfamily domain TspCOW1_17040 PF00989 PAS fold TspCOW1_17040 PF11808 Phosphate regulon sensor protein PhoR TspCOW1_17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_17040 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_17050 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_17050 PF00072 Response regulator receiver domain TspCOW1_17080 PF07556 Protein of unknown function (DUF1538) TspCOW1_17090 PF07556 Protein of unknown function (DUF1538) TspCOW1_17110 PF01235 Sodium:alanine symporter family TspCOW1_17120 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TspCOW1_17120 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TspCOW1_17130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TspCOW1_17130 PF00753 Metallo-beta-lactamase superfamily TspCOW1_17130 PF10996 Beta-Casp domain TspCOW1_17150 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_17150 PF00072 Response regulator receiver domain TspCOW1_17170 PF00873 AcrB/AcrD/AcrF family TspCOW1_17190 PF00158 Sigma-54 interaction domain TspCOW1_17190 PF02954 Bacterial regulatory protein, Fis family TspCOW1_17190 PF01590 GAF domain TspCOW1_17200 PF00484 Carbonic anhydrase TspCOW1_17220 PF02560 Cyanate lyase C-terminal domain TspCOW1_17230 PF00005 ABC transporter TspCOW1_17240 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_17260 PF01590 GAF domain TspCOW1_17260 PF00158 Sigma-54 interaction domain TspCOW1_17280 PF07411 Domain of unknown function (DUF1508) TspCOW1_17300 PF00733 Asparagine synthase TspCOW1_17300 PF13537 Glutamine amidotransferase domain TspCOW1_17310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TspCOW1_17310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TspCOW1_17320 PF00474 Sodium:solute symporter family TspCOW1_17330 PF00857 Isochorismatase family TspCOW1_17340 PF01546 Peptidase family M20/M25/M40 TspCOW1_17360 PF01475 Ferric uptake regulator family TspCOW1_17370 PF01266 FAD dependent oxidoreductase TspCOW1_17380 PF08334 Type II secretion system (T2SS), protein G TspCOW1_17380 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_17470 PF05567 Neisseria PilC beta-propeller domain TspCOW1_17490 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor TspCOW1_17490 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_17500 PF02401 LytB protein TspCOW1_17520 PF01252 Signal peptidase (SPase) II TspCOW1_17530 PF06827 Zinc finger found in FPG and IleRS TspCOW1_17530 PF08264 Anticodon-binding domain of tRNA TspCOW1_17530 PF00133 tRNA synthetases class I (I, L, M and V) TspCOW1_17540 PF01687 Riboflavin kinase TspCOW1_17540 PF06574 FAD synthetase TspCOW1_17550 PF03023 Lipid II flippase MurJ TspCOW1_17560 PF01649 Ribosomal protein S20 TspCOW1_17570 PF00696 Amino acid kinase family TspCOW1_17570 PF01472 PUA domain TspCOW1_17580 PF01926 50S ribosome-binding GTPase TspCOW1_17580 PF01018 GTP1/OBG TspCOW1_17590 PF01016 Ribosomal L27 protein TspCOW1_17600 PF00829 Ribosomal prokaryotic L21 protein TspCOW1_17610 PF00348 Polyprenyl synthetase TspCOW1_17620 PF11798 IMS family HHH motif TspCOW1_17620 PF11799 impB/mucB/samB family C-terminal domain TspCOW1_17620 PF00817 impB/mucB/samB family TspCOW1_17630 PF00717 Peptidase S24-like TspCOW1_17630 PF01726 LexA DNA binding domain TspCOW1_17670 PF03527 RHS protein TspCOW1_17680 PF03527 RHS protein TspCOW1_17700 PF03527 RHS protein TspCOW1_17720 PF03527 RHS protein TspCOW1_17740 PF03527 RHS protein TspCOW1_17750 PF03527 RHS protein TspCOW1_17790 PF04011 LemA family TspCOW1_17810 PF00581 Rhodanese-like domain TspCOW1_17820 PF04358 DsrC like protein TspCOW1_17830 PF02082 Transcriptional regulator TspCOW1_17840 PF04551 GcpE protein TspCOW1_17850 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TspCOW1_17850 PF05221 S-adenosyl-L-homocysteine hydrolase TspCOW1_17910 PF00226 DnaJ domain TspCOW1_17910 PF00684 DnaJ central domain TspCOW1_17910 PF01556 DnaJ C terminal domain TspCOW1_17950 PF00581 Rhodanese-like domain TspCOW1_17970 PF04055 Radical SAM superfamily TspCOW1_17970 PF11842 Domain of unknown function (DUF3362) TspCOW1_17970 PF08497 Radical SAM N-terminal TspCOW1_18000 PF00970 Oxidoreductase FAD-binding domain TspCOW1_18000 PF00111 2Fe-2S iron-sulfur cluster binding domain TspCOW1_18000 PF00175 Oxidoreductase NAD-binding domain TspCOW1_18050 PF01641 SelR domain TspCOW1_18060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TspCOW1_18070 PF08402 TOBE domain TspCOW1_18070 PF00005 ABC transporter TspCOW1_18080 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_18090 PF13416 Bacterial extracellular solute-binding protein TspCOW1_18100 PF02696 Uncharacterized ACR, YdiU/UPF0061 family TspCOW1_18110 PF00459 Inositol monophosphatase family TspCOW1_18170 PF03969 AFG1-like ATPase TspCOW1_18180 PF00753 Metallo-beta-lactamase superfamily TspCOW1_18180 PF16123 Hydroxyacylglutathione hydrolase C-terminus TspCOW1_18200 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain TspCOW1_18210 PF07298 NnrU protein TspCOW1_18230 PF02082 Transcriptional regulator TspCOW1_18260 PF00293 NUDIX domain TspCOW1_18300 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_18300 PF00593 TonB dependent receptor TspCOW1_18310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_18310 PF13426 PAS domain TspCOW1_18310 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_18310 PF08448 PAS fold TspCOW1_18310 PF00072 Response regulator receiver domain TspCOW1_18320 PF00072 Response regulator receiver domain TspCOW1_18330 PF00672 HAMP domain TspCOW1_18330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_18340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TspCOW1_18340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TspCOW1_18360 PF00588 SpoU rRNA Methylase family TspCOW1_18360 PF12105 SpoU, rRNA methylase, C-terminal TspCOW1_18420 PF03372 Endonuclease/Exonuclease/phosphatase family TspCOW1_18440 PF00300 Histidine phosphatase superfamily (branch 1) TspCOW1_18450 PF17113 Regulatory signalling modulator protein AmpE TspCOW1_18450 PF03186 CobD/Cbib protein TspCOW1_18460 PF01510 N-acetylmuramoyl-L-alanine amidase TspCOW1_18480 PF00920 Dehydratase family TspCOW1_18490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_18490 PF08447 PAS fold TspCOW1_18500 PF18030 RimK PreATP-grasp domain TspCOW1_18500 PF08443 RimK-like ATP-grasp domain TspCOW1_18510 PF00583 Acetyltransferase (GNAT) family TspCOW1_18520 PF01546 Peptidase family M20/M25/M40 TspCOW1_18520 PF07687 Peptidase dimerisation domain TspCOW1_18530 PF00583 Acetyltransferase (GNAT) family TspCOW1_18530 PF00696 Amino acid kinase family TspCOW1_18540 PF00149 Calcineurin-like phosphoesterase TspCOW1_18550 PF00206 Lyase TspCOW1_18550 PF10415 Fumarase C C-terminus TspCOW1_18580 PF00482 Type II secretion system (T2SS), protein F TspCOW1_18590 PF00437 Type II/IV secretion system protein TspCOW1_18600 PF03958 Bacterial type II/III secretion system short domain TspCOW1_18600 PF00263 Bacterial type II and III secretion system protein TspCOW1_18610 PF11356 Type II secretion system protein C TspCOW1_18620 PF00271 Helicase conserved C-terminal domain TspCOW1_18620 PF00270 DEAD/DEAH box helicase TspCOW1_18630 PF00085 Thioredoxin TspCOW1_18640 PF07497 Rho termination factor, RNA-binding domain TspCOW1_18640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_18640 PF07498 Rho termination factor, N-terminal domain TspCOW1_18650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TspCOW1_18650 PF02844 Phosphoribosylglycinamide synthetase, N domain TspCOW1_18650 PF02843 Phosphoribosylglycinamide synthetase, C domain TspCOW1_18660 PF02142 MGS-like domain TspCOW1_18660 PF01808 AICARFT/IMPCHase bienzyme TspCOW1_18670 PF02954 Bacterial regulatory protein, Fis family TspCOW1_18680 PF01207 Dihydrouridine synthase (Dus) TspCOW1_18710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TspCOW1_18710 PF00289 Biotin carboxylase, N-terminal domain TspCOW1_18710 PF02785 Biotin carboxylase C-terminal domain TspCOW1_18730 PF00364 Biotin-requiring enzyme TspCOW1_18740 PF01220 Dehydroquinase class II TspCOW1_18820 PF00437 Type II/IV secretion system protein TspCOW1_18840 PF04972 BON domain TspCOW1_18840 PF13629 Pilus formation protein N terminal region TspCOW1_18840 PF00263 Bacterial type II and III secretion system protein TspCOW1_18890 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_18890 PF01590 GAF domain TspCOW1_18890 PF00563 EAL domain TspCOW1_18890 PF00360 Phytochrome region TspCOW1_18900 PF17200 Single Cache domain 2 TspCOW1_18900 PF07730 Histidine kinase TspCOW1_18910 PF00196 Bacterial regulatory proteins, luxR family TspCOW1_18910 PF00072 Response regulator receiver domain TspCOW1_19050 PF13614 AAA domain TspCOW1_19060 PF01471 Putative peptidoglycan binding domain TspCOW1_19060 PF13401 AAA domain TspCOW1_19080 PF00459 Inositol monophosphatase family TspCOW1_19090 PF00293 NUDIX domain TspCOW1_19100 PF13419 Haloacid dehalogenase-like hydrolase TspCOW1_19140 PF05134 Type II secretion system (T2SS), protein L TspCOW1_19140 PF12693 GspL periplasmic domain TspCOW1_19150 PF03934 Type II secretion system (T2SS), protein K TspCOW1_19160 PF11612 Type II secretion system (T2SS), protein J TspCOW1_19160 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_19180 PF12019 Type II transport protein GspH TspCOW1_19180 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_19190 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_19190 PF08334 Type II secretion system (T2SS), protein G TspCOW1_19210 PF08543 Phosphomethylpyrimidine kinase TspCOW1_19220 PF02581 Thiamine monophosphate synthase TspCOW1_19230 PF00202 Aminotransferase class-III TspCOW1_19240 PF09335 SNARE associated Golgi protein TspCOW1_19260 PF02441 Flavoprotein TspCOW1_19270 PF01225 Mur ligase family, catalytic domain TspCOW1_19270 PF08245 Mur ligase middle domain TspCOW1_19270 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_19290 PF13091 PLD-like domain TspCOW1_19300 PF05191 Adenylate kinase, active site lid TspCOW1_19310 PF00365 Phosphofructokinase TspCOW1_19320 PF03030 Inorganic H+ pyrophosphatase TspCOW1_19330 PF00719 Inorganic pyrophosphatase TspCOW1_19340 PF02391 MoaE protein TspCOW1_19350 PF02597 ThiS family TspCOW1_19360 PF01967 MoaC family TspCOW1_19420 PF08668 HDOD domain TspCOW1_19480 PF04204 Homoserine O-succinyltransferase TspCOW1_19490 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_19510 PF01479 S4 domain TspCOW1_19510 PF00849 RNA pseudouridylate synthase TspCOW1_19530 PF00149 Calcineurin-like phosphoesterase TspCOW1_19580 PF16326 ABC transporter C-terminal domain TspCOW1_19580 PF12848 ABC transporter TspCOW1_19580 PF00005 ABC transporter TspCOW1_19600 PF01844 HNH endonuclease TspCOW1_19610 PF07311 Dodecin TspCOW1_19620 PF06150 ChaB TspCOW1_19630 PF10518 TAT (twin-arginine translocation) pathway signal sequence TspCOW1_19630 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_19630 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding TspCOW1_19670 PF03466 LysR substrate binding domain TspCOW1_19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_19680 PF00916 Sulfate permease family TspCOW1_19680 PF01740 STAS domain TspCOW1_19700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TspCOW1_19720 PF00210 Ferritin-like domain TspCOW1_19730 PF00936 BMC domain TspCOW1_19740 PF00936 BMC domain TspCOW1_19750 PF00936 BMC domain TspCOW1_19760 PF03319 Ethanolamine utilisation protein EutN/carboxysome TspCOW1_19800 PF00101 Ribulose bisphosphate carboxylase, small chain TspCOW1_19810 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TspCOW1_19810 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TspCOW1_19820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_19830 PF00270 DEAD/DEAH box helicase TspCOW1_19830 PF00271 Helicase conserved C-terminal domain TspCOW1_19850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_19870 PF02687 FtsX-like permease family TspCOW1_19870 PF12704 MacB-like periplasmic core domain TspCOW1_19870 PF00005 ABC transporter TspCOW1_19880 PF00360 Phytochrome region TspCOW1_19880 PF00563 EAL domain TspCOW1_19880 PF01590 GAF domain TspCOW1_19880 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_19890 PF00873 AcrB/AcrD/AcrF family TspCOW1_19920 PF06826 Predicted Permease Membrane Region TspCOW1_19920 PF02080 TrkA-C domain TspCOW1_19930 PF00205 Thiamine pyrophosphate enzyme, central domain TspCOW1_19930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TspCOW1_19930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TspCOW1_19960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TspCOW1_20000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TspCOW1_20010 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_20020 PF00005 ABC transporter TspCOW1_20020 PF00571 CBS domain TspCOW1_20040 PF00578 AhpC/TSA family TspCOW1_20150 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_20160 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_20160 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_20160 PF00563 EAL domain TspCOW1_20170 PF08447 PAS fold TspCOW1_20170 PF08448 PAS fold TspCOW1_20170 PF00563 EAL domain TspCOW1_20170 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_20180 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_20180 PF00563 EAL domain TspCOW1_20180 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_20260 PF05872 Bacterial protein of unknown function (DUF853) TspCOW1_20270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_20310 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TspCOW1_20310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TspCOW1_20320 PF05524 PEP-utilising enzyme, N-terminal TspCOW1_20320 PF02896 PEP-utilising enzyme, TIM barrel domain TspCOW1_20320 PF00391 PEP-utilising enzyme, mobile domain TspCOW1_20380 PF03992 Antibiotic biosynthesis monooxygenase TspCOW1_20390 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_20390 PF00563 EAL domain TspCOW1_20390 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_20430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_20430 PF08447 PAS fold TspCOW1_20430 PF13426 PAS domain TspCOW1_20480 PF01758 Sodium Bile acid symporter family TspCOW1_20500 PF01741 Large-conductance mechanosensitive channel, MscL TspCOW1_20530 PF01206 Sulfurtransferase TusA TspCOW1_20580 PF14855 Pilus-assembly fibrillin subunit, chaperone TspCOW1_20590 PF01272 Transcription elongation factor, GreA/GreB, C-term TspCOW1_20590 PF03449 Transcription elongation factor, N-terminal TspCOW1_20610 PF14760 Rnk N-terminus TspCOW1_20610 PF01272 Transcription elongation factor, GreA/GreB, C-term TspCOW1_20620 PF00665 Integrase core domain TspCOW1_20620 PF13333 Integrase core domain TspCOW1_20620 PF13276 HTH-like domain TspCOW1_20630 PF01527 Transposase TspCOW1_20660 PF13667 ThiC-associated domain TspCOW1_20660 PF01964 Radical SAM ThiC family TspCOW1_20690 PF00581 Rhodanese-like domain TspCOW1_20700 PF02321 Outer membrane efflux protein TspCOW1_20720 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TspCOW1_20730 PF03279 Bacterial lipid A biosynthesis acyltransferase TspCOW1_20820 PF01063 Amino-transferase class IV TspCOW1_20830 PF03710 Glutamate-ammonia ligase adenylyltransferase TspCOW1_20830 PF08335 GlnD PII-uridylyltransferase TspCOW1_20850 PF00437 Type II/IV secretion system protein TspCOW1_20860 PF04542 Sigma-70 region 2 TspCOW1_20860 PF08281 Sigma-70, region 4 TspCOW1_20880 PF00118 TCP-1/cpn60 chaperonin family TspCOW1_20890 PF00166 Chaperonin 10 Kd subunit TspCOW1_20900 PF04186 FxsA cytoplasmic membrane protein TspCOW1_20910 PF03091 CutA1 divalent ion tolerance protein TspCOW1_20920 PF11412 Disulphide bond corrector protein DsbC TspCOW1_20920 PF02683 Cytochrome C biogenesis protein transmembrane region TspCOW1_20930 PF01541 GIY-YIG catalytic domain TspCOW1_20940 PF00072 Response regulator receiver domain TspCOW1_20940 PF02954 Bacterial regulatory protein, Fis family TspCOW1_20940 PF00158 Sigma-54 interaction domain TspCOW1_20950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_20950 PF00072 Response regulator receiver domain TspCOW1_20950 PF00672 HAMP domain TspCOW1_20950 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_20950 PF01627 Hpt domain TspCOW1_20970 PF01370 NAD dependent epimerase/dehydratase family TspCOW1_20980 PF16363 GDP-mannose 4,6 dehydratase TspCOW1_20990 PF00953 Glycosyl transferase family 4 TspCOW1_21000 PF09721 Transmembrane exosortase (Exosortase_EpsH) TspCOW1_21090 PF00534 Glycosyl transferases group 1 TspCOW1_21090 PF13439 Glycosyltransferase Family 4 TspCOW1_21100 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_21200 PF16363 GDP-mannose 4,6 dehydratase TspCOW1_21210 PF04321 RmlD substrate binding domain TspCOW1_21220 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TspCOW1_21230 PF00483 Nucleotidyl transferase TspCOW1_21290 PF01747 ATP-sulfurylase TspCOW1_21290 PF14306 PUA-like domain TspCOW1_21340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TspCOW1_21340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TspCOW1_21340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TspCOW1_21340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TspCOW1_21390 PF01555 DNA methylase TspCOW1_21440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TspCOW1_21630 PF09722 Protein of unknown function (DUF2384) TspCOW1_21670 PF01883 Iron-sulfur cluster assembly protein TspCOW1_21670 PF10609 NUBPL iron-transfer P-loop NTPase TspCOW1_21740 PF00589 Phage integrase family TspCOW1_21750 PF04362 Bacterial Fe(2+) trafficking TspCOW1_21760 PF14815 NUDIX domain TspCOW1_21760 PF00730 HhH-GPD superfamily base excision DNA repair protein TspCOW1_21760 PF00633 Helix-hairpin-helix motif TspCOW1_21760 PF10576 Iron-sulfur binding domain of endonuclease III TspCOW1_21770 PF05170 AsmA family TspCOW1_21790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TspCOW1_21790 PF00437 Type II/IV secretion system protein TspCOW1_21830 PF00501 AMP-binding enzyme TspCOW1_21850 PF05690 Thiazole biosynthesis protein ThiG TspCOW1_21860 PF01544 CorA-like Mg2+ transporter protein TspCOW1_21870 PF12794 Mechanosensitive ion channel inner membrane domain 1 TspCOW1_21870 PF00924 Mechanosensitive ion channel TspCOW1_21870 PF12795 Mechanosensitive ion channel porin domain TspCOW1_21880 PF02390 Putative methyltransferase TspCOW1_21890 PF00485 Phosphoribulokinase / Uridine kinase family TspCOW1_21910 PF00248 Aldo/keto reductase family TspCOW1_21930 PF02628 Cytochrome oxidase assembly protein TspCOW1_22000 PF00072 Response regulator receiver domain TspCOW1_22000 PF00158 Sigma-54 interaction domain TspCOW1_22000 PF02954 Bacterial regulatory protein, Fis family TspCOW1_22010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_22010 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_22010 PF00989 PAS fold TspCOW1_22020 PF00873 AcrB/AcrD/AcrF family TspCOW1_22080 PF00403 Heavy-metal-associated domain TspCOW1_22090 PF03475 3-alpha domain TspCOW1_22090 PF03473 MOSC domain TspCOW1_22110 PF00571 CBS domain TspCOW1_22110 PF00478 IMP dehydrogenase / GMP reductase domain TspCOW1_22150 PF05275 Copper resistance protein B precursor (CopB) TspCOW1_22160 PF07732 Multicopper oxidase TspCOW1_22160 PF00394 Multicopper oxidase TspCOW1_22160 PF07731 Multicopper oxidase TspCOW1_22170 PF01545 Cation efflux family TspCOW1_22170 PF16916 Dimerisation domain of Zinc Transporter TspCOW1_22220 PF00892 EamA-like transporter family TspCOW1_22290 PF00873 AcrB/AcrD/AcrF family TspCOW1_22300 PF00529 HlyD membrane-fusion protein of T1SS TspCOW1_22300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TspCOW1_22330 PF01259 SAICAR synthetase TspCOW1_22340 PF00731 AIR carboxylase TspCOW1_22350 PF02222 ATP-grasp domain TspCOW1_22350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TspCOW1_22360 PF00462 Glutaredoxin TspCOW1_22360 PF08534 Redoxin TspCOW1_22370 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_22370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TspCOW1_22380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_22380 PF03466 LysR substrate binding domain TspCOW1_22390 PF00563 EAL domain TspCOW1_22390 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_22390 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_22400 PF05175 Methyltransferase small domain TspCOW1_22420 PF07728 AAA domain (dynein-related subfamily) TspCOW1_22420 PF08406 CbbQ/NirQ/NorQ C-terminal TspCOW1_22430 PF00101 Ribulose bisphosphate carboxylase, small chain TspCOW1_22440 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TspCOW1_22440 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TspCOW1_22450 PF12849 PBP superfamily domain TspCOW1_22460 PF01568 Molydopterin dinucleotide binding domain TspCOW1_22460 PF00384 Molybdopterin oxidoreductase TspCOW1_22460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TspCOW1_22470 PF12800 4Fe-4S binding domain TspCOW1_22470 PF13247 4Fe-4S dicluster domain TspCOW1_22480 PF04976 DMSO reductase anchor subunit (DmsC) TspCOW1_22490 PF04055 Radical SAM superfamily TspCOW1_22490 PF06463 Molybdenum Cofactor Synthesis C TspCOW1_22500 PF01680 SOR/SNZ family TspCOW1_22510 PF01174 SNO glutamine amidotransferase family TspCOW1_22520 PF02036 SCP-2 sterol transfer family TspCOW1_22560 PF01136 Peptidase family U32 TspCOW1_22570 PF01136 Peptidase family U32 TspCOW1_22580 PF16199 Radical_SAM C-terminal domain TspCOW1_22580 PF04055 Radical SAM superfamily TspCOW1_22600 PF00092 von Willebrand factor type A domain TspCOW1_22630 PF07728 AAA domain (dynein-related subfamily) TspCOW1_22630 PF08406 CbbQ/NirQ/NorQ C-terminal TspCOW1_22650 PF00510 Cytochrome c oxidase subunit III TspCOW1_22660 PF00115 Cytochrome C and Quinol oxidase polypeptide I TspCOW1_22670 PF00034 Cytochrome c TspCOW1_22680 PF00027 Cyclic nucleotide-binding domain TspCOW1_22680 PF13545 Crp-like helix-turn-helix domain TspCOW1_22690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TspCOW1_22690 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TspCOW1_22690 PF02142 MGS-like domain TspCOW1_22710 PF04055 Radical SAM superfamily TspCOW1_22710 PF13186 Iron-sulfur cluster-binding domain TspCOW1_22720 PF17805 AsnC-like ligand binding domain TspCOW1_22730 PF13404 AsnC-type helix-turn-helix domain TspCOW1_22730 PF17805 AsnC-like ligand binding domain TspCOW1_22740 PF17805 AsnC-like ligand binding domain TspCOW1_22750 PF13404 AsnC-type helix-turn-helix domain TspCOW1_22750 PF17805 AsnC-like ligand binding domain TspCOW1_22770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_22780 PF10414 Sirohaem synthase dimerisation region TspCOW1_22780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TspCOW1_22790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_22800 PF01925 Sulfite exporter TauE/SafE TspCOW1_22810 PF00171 Aldehyde dehydrogenase family TspCOW1_22820 PF01551 Peptidase family M23 TspCOW1_22820 PF01464 Transglycosylase SLT domain TspCOW1_22820 PF10145 Phage-related minor tail protein TspCOW1_22850 PF03334 Na+/H+ antiporter subunit TspCOW1_22880 PF00361 Proton-conducting membrane transporter TspCOW1_22890 PF00361 Proton-conducting membrane transporter TspCOW1_22900 PF00361 Proton-conducting membrane transporter TspCOW1_22920 PF01966 HD domain TspCOW1_22920 PF01743 Poly A polymerase head domain TspCOW1_22920 PF12627 Probable RNA and SrmB- binding site of polymerase A TspCOW1_22940 PF02673 Bacitracin resistance protein BacA TspCOW1_22960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TspCOW1_22970 PF02152 Dihydroneopterin aldolase TspCOW1_22980 PF02660 Glycerol-3-phosphate acyltransferase TspCOW1_22990 PF00814 Glycoprotease family TspCOW1_23000 PF01165 Ribosomal protein S21 TspCOW1_23010 PF09424 Yqey-like protein TspCOW1_23020 PF10410 DnaB-helicase binding domain of primase TspCOW1_23020 PF08278 DNA primase DnaG DnaB-binding TspCOW1_23020 PF08275 DNA primase catalytic core, N-terminal domain TspCOW1_23020 PF01807 CHC2 zinc finger TspCOW1_23020 PF13662 Toprim domain TspCOW1_23030 PF03979 Sigma-70 factor, region 1.1 TspCOW1_23030 PF00140 Sigma-70 factor, region 1.2 TspCOW1_23030 PF04542 Sigma-70 region 2 TspCOW1_23030 PF04545 Sigma-70, region 4 TspCOW1_23030 PF04539 Sigma-70 region 3 TspCOW1_23030 PF04546 Sigma-70, non-essential region TspCOW1_23040 PF01810 LysE type translocator TspCOW1_23060 PF09722 Protein of unknown function (DUF2384) TspCOW1_23070 PF02600 Disulfide bond formation protein DsbB TspCOW1_23080 PF05573 NosL TspCOW1_23100 PF12679 ABC-2 family transporter protein TspCOW1_23110 PF00005 ABC transporter TspCOW1_23120 PF05048 Periplasmic copper-binding protein (NosD) TspCOW1_23130 PF18764 Nitrous oxide reductase propeller repeat TspCOW1_23130 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TspCOW1_23130 PF18793 Nitrous oxide reductase propeller repeat 2 TspCOW1_23140 PF12801 4Fe-4S binding domain TspCOW1_23140 PF04205 FMN-binding domain TspCOW1_23150 PF02607 B12 binding domain TspCOW1_23150 PF00809 Pterin binding enzyme TspCOW1_23150 PF02965 Vitamin B12 dependent methionine synthase, activation domain TspCOW1_23150 PF02310 B12 binding domain TspCOW1_23150 PF02574 Homocysteine S-methyltransferase TspCOW1_23190 PF00313 'Cold-shock' DNA-binding domain TspCOW1_23220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TspCOW1_23220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TspCOW1_23230 PF01389 OmpA-like transmembrane domain TspCOW1_23230 PF00691 OmpA family TspCOW1_23240 PF01541 GIY-YIG catalytic domain TspCOW1_23260 PF00072 Response regulator receiver domain TspCOW1_23270 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_23270 PF05230 MASE2 domain TspCOW1_23320 PF08443 RimK-like ATP-grasp domain TspCOW1_23320 PF18030 RimK PreATP-grasp domain TspCOW1_23350 PF00994 Probable molybdopterin binding domain TspCOW1_23370 PF00072 Response regulator receiver domain TspCOW1_23380 PF00581 Rhodanese-like domain TspCOW1_23410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_23420 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_23420 PF00072 Response regulator receiver domain TspCOW1_23440 PF00005 ABC transporter TspCOW1_23450 PF01061 ABC-2 type transporter TspCOW1_23490 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TspCOW1_23490 PF12801 4Fe-4S binding domain TspCOW1_23490 PF13746 4Fe-4S dicluster domain TspCOW1_23500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_23500 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TspCOW1_23530 PF00115 Cytochrome C and Quinol oxidase polypeptide I TspCOW1_23540 PF00027 Cyclic nucleotide-binding domain TspCOW1_23540 PF13545 Crp-like helix-turn-helix domain TspCOW1_23550 PF00475 Imidazoleglycerol-phosphate dehydratase TspCOW1_23560 PF00117 Glutamine amidotransferase class-I TspCOW1_23570 PF00977 Histidine biosynthesis protein TspCOW1_23580 PF00977 Histidine biosynthesis protein TspCOW1_23590 PF01502 Phosphoribosyl-AMP cyclohydrolase TspCOW1_23600 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TspCOW1_23610 PF02416 mttA/Hcf106 family TspCOW1_23620 PF02416 mttA/Hcf106 family TspCOW1_23630 PF00902 Sec-independent protein translocase protein (TatC) TspCOW1_23660 PF13409 Glutathione S-transferase, N-terminal domain TspCOW1_23670 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_23690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TspCOW1_23690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TspCOW1_23690 PF00205 Thiamine pyrophosphate enzyme, central domain TspCOW1_23700 PF01323 DSBA-like thioredoxin domain TspCOW1_23710 PF01578 Cytochrome C assembly protein TspCOW1_23720 PF05140 ResB-like family TspCOW1_23730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_23740 PF01926 50S ribosome-binding GTPase TspCOW1_23750 PF01612 3'-5' exonuclease TspCOW1_23750 PF00476 DNA polymerase family A TspCOW1_23750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TspCOW1_23750 PF01367 5'-3' exonuclease, C-terminal SAM fold TspCOW1_23760 PF03641 Possible lysine decarboxylase TspCOW1_23790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TspCOW1_23800 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_23800 PF00563 EAL domain TspCOW1_23800 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_23810 PF01131 DNA topoisomerase TspCOW1_23810 PF01751 Toprim domain TspCOW1_23810 PF13368 Topoisomerase C-terminal repeat TspCOW1_23820 PF04361 Protein of unknown function (DUF494) TspCOW1_23830 PF02481 DNA recombination-mediator protein A TspCOW1_23830 PF17782 DprA winged helix domain TspCOW1_23850 PF01327 Polypeptide deformylase TspCOW1_23860 PF00551 Formyl transferase TspCOW1_23860 PF02911 Formyl transferase, C-terminal domain TspCOW1_23870 PF01029 NusB family TspCOW1_23870 PF01189 16S rRNA methyltransferase RsmB/F TspCOW1_23890 PF00989 PAS fold TspCOW1_23890 PF00672 HAMP domain TspCOW1_23890 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_23890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_23900 PF00072 Response regulator receiver domain TspCOW1_23900 PF00158 Sigma-54 interaction domain TspCOW1_23900 PF02954 Bacterial regulatory protein, Fis family TspCOW1_23910 PF02254 TrkA-N domain TspCOW1_23910 PF02080 TrkA-C domain TspCOW1_23920 PF02386 Cation transport protein TspCOW1_23940 PF07690 Major Facilitator Superfamily TspCOW1_23950 PF03471 Transporter associated domain TspCOW1_23950 PF00999 Sodium/hydrogen exchanger family TspCOW1_23950 PF02080 TrkA-C domain TspCOW1_23980 PF04343 Protein of unknown function, DUF488 TspCOW1_24000 PF01171 PP-loop family TspCOW1_24020 PF13686 DsrE/DsrF/DrsH-like family TspCOW1_24030 PF00561 alpha/beta hydrolase fold TspCOW1_24040 PF02580 D-Tyr-tRNA(Tyr) deacylase TspCOW1_24050 PF00570 HRDC domain TspCOW1_24050 PF01612 3'-5' exonuclease TspCOW1_24060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TspCOW1_24060 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_24070 PF01432 Peptidase family M3 TspCOW1_24090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TspCOW1_24110 PF00175 Oxidoreductase NAD-binding domain TspCOW1_24110 PF00111 2Fe-2S iron-sulfur cluster binding domain TspCOW1_24110 PF00970 Oxidoreductase FAD-binding domain TspCOW1_24140 PF02602 Uroporphyrinogen-III synthase HemD TspCOW1_24150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TspCOW1_24150 PF03900 Porphobilinogen deaminase, C-terminal domain TspCOW1_24170 PF04397 LytTr DNA-binding domain TspCOW1_24170 PF00072 Response regulator receiver domain TspCOW1_24180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_24180 PF06580 Histidine kinase TspCOW1_24190 PF14698 Argininosuccinate lyase C-terminal TspCOW1_24190 PF00206 Lyase TspCOW1_24200 PF00563 EAL domain TspCOW1_24200 PF08448 PAS fold TspCOW1_24200 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_24240 PF01295 Adenylate cyclase, class-I TspCOW1_24240 PF12633 Adenylate cyclase NT domain TspCOW1_24290 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TspCOW1_24290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_24320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TspCOW1_24320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TspCOW1_24330 PF08448 PAS fold TspCOW1_24330 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_24340 PF01678 Diaminopimelate epimerase TspCOW1_24360 PF00589 Phage integrase family TspCOW1_24360 PF02899 Phage integrase, N-terminal SAM-like domain TspCOW1_24370 PF00227 Proteasome subunit TspCOW1_24380 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_24380 PF07724 AAA domain (Cdc48 subfamily) TspCOW1_24380 PF10431 C-terminal, D2-small domain, of ClpB protein TspCOW1_24400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TspCOW1_24400 PF03466 LysR substrate binding domain TspCOW1_24420 PF01925 Sulfite exporter TauE/SafE TspCOW1_24430 PF01209 ubiE/COQ5 methyltransferase family TspCOW1_24460 PF03109 ABC1 family TspCOW1_24470 PF01965 DJ-1/PfpI family TspCOW1_24480 PF04748 Divergent polysaccharide deacetylase TspCOW1_24490 PF03572 Peptidase family S41 TspCOW1_24490 PF13180 PDZ domain TspCOW1_24500 PF01551 Peptidase family M23 TspCOW1_24510 PF01676 Metalloenzyme superfamily TspCOW1_24510 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TspCOW1_24540 PF00581 Rhodanese-like domain TspCOW1_24550 PF00462 Glutaredoxin TspCOW1_24560 PF02556 Preprotein translocase subunit SecB TspCOW1_24570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TspCOW1_24570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TspCOW1_24590 PF01078 Magnesium chelatase, subunit ChlI TspCOW1_24590 PF13335 Magnesium chelatase, subunit ChlI C-terminal TspCOW1_24600 PF04380 Membrane fusogenic activity TspCOW1_24610 PF00543 Nitrogen regulatory protein P-II TspCOW1_24620 PF00909 Ammonium Transporter Family TspCOW1_24640 PF01300 Telomere recombination TspCOW1_24650 PF08448 PAS fold TspCOW1_24650 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_24660 PF01218 Coproporphyrinogen III oxidase TspCOW1_24670 PF00301 Rubredoxin TspCOW1_24710 PF00490 Delta-aminolevulinic acid dehydratase TspCOW1_24720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TspCOW1_24720 PF08501 Shikimate dehydrogenase substrate binding domain TspCOW1_24720 PF01488 Shikimate / quinate 5-dehydrogenase TspCOW1_24750 PF00593 TonB dependent receptor TspCOW1_24750 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_24770 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_24780 PF00005 ABC transporter TspCOW1_24780 PF12848 ABC transporter TspCOW1_24830 PF00862 Sucrose synthase TspCOW1_24830 PF00534 Glycosyl transferases group 1 TspCOW1_24840 PF00862 Sucrose synthase TspCOW1_24840 PF00534 Glycosyl transferases group 1 TspCOW1_24850 PF00294 pfkB family carbohydrate kinase TspCOW1_24880 PF01047 MarR family TspCOW1_24940 PF01380 SIS domain TspCOW1_24970 PF01380 SIS domain TspCOW1_24980 PF00132 Bacterial transferase hexapeptide (six repeats) TspCOW1_24980 PF12804 MobA-like NTP transferase domain TspCOW1_24990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TspCOW1_25000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TspCOW1_25000 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TspCOW1_25010 PF02874 ATP synthase alpha/beta family, beta-barrel domain TspCOW1_25010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_25020 PF00231 ATP synthase TspCOW1_25030 PF02874 ATP synthase alpha/beta family, beta-barrel domain TspCOW1_25030 PF00306 ATP synthase alpha/beta chain, C terminal domain TspCOW1_25030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TspCOW1_25040 PF00213 ATP synthase delta (OSCP) subunit TspCOW1_25050 PF00430 ATP synthase B/B' CF(0) TspCOW1_25060 PF00137 ATP synthase subunit C TspCOW1_25070 PF00119 ATP synthase A chain TspCOW1_25090 PF17762 HTH domain found in ParB protein TspCOW1_25090 PF02195 ParB-like nuclease domain TspCOW1_25100 PF13614 AAA domain TspCOW1_25110 PF02527 rRNA small subunit methyltransferase G TspCOW1_25120 PF01134 Glucose inhibited division protein A TspCOW1_25120 PF13932 GidA associated domain TspCOW1_25130 PF02311 AraC-like ligand binding domain TspCOW1_25130 PF12833 Helix-turn-helix domain TspCOW1_25150 PF17863 AAA lid domain TspCOW1_25150 PF07726 ATPase family associated with various cellular activities (AAA) TspCOW1_25170 PF01841 Transglutaminase-like superfamily TspCOW1_25170 PF11992 Domain of unknown function (DUF3488) TspCOW1_25170 PF13559 Domain of unknown function (DUF4129) TspCOW1_25180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TspCOW1_25210 PF01926 50S ribosome-binding GTPase TspCOW1_25210 PF12631 MnmE helical domain TspCOW1_25210 PF10396 GTP-binding protein TrmE N-terminus TspCOW1_25220 PF02096 60Kd inner membrane protein TspCOW1_25220 PF14849 YidC periplasmic domain TspCOW1_25230 PF01809 Putative membrane protein insertion efficiency factor TspCOW1_25240 PF00825 Ribonuclease P TspCOW1_25250 PF00468 Ribosomal protein L34 TspCOW1_25260 PF00308 Bacterial dnaA protein TspCOW1_25260 PF08299 Bacterial dnaA protein helix-turn-helix TspCOW1_25260 PF11638 DnaA N-terminal domain TspCOW1_25270 PF02768 DNA polymerase III beta subunit, C-terminal domain TspCOW1_25270 PF02767 DNA polymerase III beta subunit, central domain TspCOW1_25270 PF00712 DNA polymerase III beta subunit, N-terminal domain TspCOW1_25280 PF02463 RecF/RecN/SMC N terminal domain TspCOW1_25290 PF18053 DNA gyrase B subunit insert domain TspCOW1_25290 PF00204 DNA gyrase B TspCOW1_25290 PF01751 Toprim domain TspCOW1_25290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_25290 PF00986 DNA gyrase B subunit, carboxyl terminus TspCOW1_25330 PF05746 DALR anticodon binding domain TspCOW1_25330 PF02092 Glycyl-tRNA synthetase beta subunit TspCOW1_25340 PF02091 Glycyl-tRNA synthetase alpha subunit TspCOW1_25380 PF01545 Cation efflux family TspCOW1_25380 PF16916 Dimerisation domain of Zinc Transporter TspCOW1_25390 PF00120 Glutamine synthetase, catalytic domain TspCOW1_25390 PF03951 Glutamine synthetase, beta-Grasp domain TspCOW1_25420 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_25420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_25420 PF00989 PAS fold TspCOW1_25430 PF00158 Sigma-54 interaction domain TspCOW1_25430 PF00072 Response regulator receiver domain TspCOW1_25430 PF02954 Bacterial regulatory protein, Fis family TspCOW1_25490 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_25500 PF00482 Type II secretion system (T2SS), protein F TspCOW1_25510 PF00437 Type II/IV secretion system protein TspCOW1_25510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TspCOW1_25540 PF03958 Bacterial type II/III secretion system short domain TspCOW1_25540 PF00263 Bacterial type II and III secretion system protein TspCOW1_25580 PF01180 Dihydroorotate dehydrogenase TspCOW1_25590 PF00588 SpoU rRNA Methylase family TspCOW1_25610 PF17283 SprT-like zinc ribbon domain TspCOW1_25610 PF10263 SprT-like family TspCOW1_25630 PF13361 UvrD-like helicase C-terminal domain TspCOW1_25630 PF00580 UvrD/REP helicase N-terminal domain TspCOW1_25640 PF01209 ubiE/COQ5 methyltransferase family TspCOW1_25650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_25680 PF00873 AcrB/AcrD/AcrF family TspCOW1_25690 PF13533 Biotin-lipoyl like TspCOW1_25700 PF05433 Glycine zipper 2TM domain TspCOW1_25700 PF16998 17 kDa outer membrane surface antigen TspCOW1_25720 PF00072 Response regulator receiver domain TspCOW1_25720 PF00158 Sigma-54 interaction domain TspCOW1_25720 PF02954 Bacterial regulatory protein, Fis family TspCOW1_25730 PF04247 Invasion gene expression up-regulator, SirB TspCOW1_25760 PF00111 2Fe-2S iron-sulfur cluster binding domain TspCOW1_25760 PF00970 Oxidoreductase FAD-binding domain TspCOW1_25760 PF00175 Oxidoreductase NAD-binding domain TspCOW1_25780 PF03239 Iron permease FTR1 family TspCOW1_25800 PF00850 Histone deacetylase domain TspCOW1_25810 PF13607 Succinyl-CoA ligase like flavodoxin domain TspCOW1_25810 PF00583 Acetyltransferase (GNAT) family TspCOW1_25810 PF13380 CoA binding domain TspCOW1_25840 PF00571 CBS domain TspCOW1_25840 PF00005 ABC transporter TspCOW1_25850 PF00877 NlpC/P60 family TspCOW1_25860 PF01470 Pyroglutamyl peptidase TspCOW1_25880 PF01814 Hemerythrin HHE cation binding domain TspCOW1_25900 PF00535 Glycosyl transferase family 2 TspCOW1_25920 PF04349 Periplasmic glucan biosynthesis protein, MdoG TspCOW1_25960 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TspCOW1_25990 PF14760 Rnk N-terminus TspCOW1_25990 PF01272 Transcription elongation factor, GreA/GreB, C-term TspCOW1_26000 PF03073 TspO/MBR family TspCOW1_26010 PF13187 4Fe-4S dicluster domain TspCOW1_26010 PF01645 Conserved region in glutamate synthase TspCOW1_26020 PF00583 Acetyltransferase (GNAT) family TspCOW1_26030 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TspCOW1_26050 PF13276 HTH-like domain TspCOW1_26050 PF13683 Integrase core domain TspCOW1_26060 PF13533 Biotin-lipoyl like TspCOW1_26070 PF00005 ABC transporter TspCOW1_26100 PF13361 UvrD-like helicase C-terminal domain TspCOW1_26100 PF00580 UvrD/REP helicase N-terminal domain TspCOW1_26120 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_26120 PF00563 EAL domain TspCOW1_26120 PF08448 PAS fold TspCOW1_26130 PF03480 Bacterial extracellular solute-binding protein, family 7 TspCOW1_26140 PF00005 ABC transporter TspCOW1_26150 PF03649 Uncharacterised protein family (UPF0014) TspCOW1_26160 PF17284 Spermidine synthase tetramerisation domain TspCOW1_26170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TspCOW1_26170 PF17944 Arginine decarboxylase C-terminal helical extension TspCOW1_26170 PF17810 Arginine decarboxylase helical bundle domain TspCOW1_26180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TspCOW1_26180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TspCOW1_26210 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_26210 PF00593 TonB dependent receptor TspCOW1_26230 PF00750 tRNA synthetases class I (R) TspCOW1_26230 PF03485 Arginyl tRNA synthetase N terminal domain TspCOW1_26230 PF05746 DALR anticodon binding domain TspCOW1_26240 PF18074 Primosomal protein N C-terminal domain TspCOW1_26240 PF17764 3′ DNA-binding domain (3′BD) TspCOW1_26240 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TspCOW1_26240 PF00271 Helicase conserved C-terminal domain TspCOW1_26240 PF00270 DEAD/DEAH box helicase TspCOW1_26250 PF02253 Phospholipase A1 TspCOW1_26260 PF02233 NAD(P) transhydrogenase beta subunit TspCOW1_26270 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TspCOW1_26280 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TspCOW1_26280 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TspCOW1_26300 PF03881 Fructosamine kinase TspCOW1_26320 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_26320 PF00563 EAL domain TspCOW1_26320 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_26330 PF01208 Uroporphyrinogen decarboxylase (URO-D) TspCOW1_26340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TspCOW1_26340 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_26350 PF01645 Conserved region in glutamate synthase TspCOW1_26350 PF00310 Glutamine amidotransferases class-II TspCOW1_26350 PF01493 GXGXG motif TspCOW1_26350 PF04898 Glutamate synthase central domain TspCOW1_26380 PF01966 HD domain TspCOW1_26380 PF13286 Phosphohydrolase-associated domain TspCOW1_26390 PF01761 3-dehydroquinate synthase TspCOW1_26400 PF01202 Shikimate kinase TspCOW1_26410 PF11741 AMIN domain TspCOW1_26410 PF00263 Bacterial type II and III secretion system protein TspCOW1_26410 PF03958 Bacterial type II/III secretion system short domain TspCOW1_26410 PF07660 Secretin and TonB N terminus short domain TspCOW1_26420 PF04351 Pilus assembly protein, PilP TspCOW1_26440 PF05137 Fimbrial assembly protein (PilN) TspCOW1_26450 PF11104 Type IV pilus assembly protein PilM; TspCOW1_26460 PF00912 Transglycosylase TspCOW1_26460 PF17092 Penicillin-binding protein OB-like domain TspCOW1_26460 PF00905 Penicillin binding protein transpeptidase domain TspCOW1_26480 PF00390 Malic enzyme, N-terminal domain TspCOW1_26480 PF03949 Malic enzyme, NAD binding domain TspCOW1_26510 PF01197 Ribosomal protein L31 TspCOW1_26530 PF00919 Uncharacterized protein family UPF0004 TspCOW1_26530 PF18693 TRAM domain TspCOW1_26530 PF04055 Radical SAM superfamily TspCOW1_26560 PF06969 HemN C-terminal domain TspCOW1_26560 PF04055 Radical SAM superfamily TspCOW1_26570 PF01725 Ham1 family TspCOW1_26580 PF01138 3' exoribonuclease family, domain 1 TspCOW1_26580 PF03725 3' exoribonuclease family, domain 2 TspCOW1_26600 PF00069 Protein kinase domain TspCOW1_26600 PF03793 PASTA domain TspCOW1_26610 PF03755 YicC-like family, N-terminal region TspCOW1_26610 PF08340 Domain of unknown function (DUF1732) TspCOW1_26620 PF00625 Guanylate kinase TspCOW1_26630 PF01192 RNA polymerase Rpb6 TspCOW1_26640 PF04607 Region found in RelA / SpoT proteins TspCOW1_26640 PF13291 ACT domain TspCOW1_26640 PF02824 TGS domain TspCOW1_26650 PF01042 Endoribonuclease L-PSP TspCOW1_26660 PF00270 DEAD/DEAH box helicase TspCOW1_26660 PF17191 RecG wedge domain TspCOW1_26660 PF00271 Helicase conserved C-terminal domain TspCOW1_26670 PF04345 Chorismate lyase TspCOW1_26680 PF01040 UbiA prenyltransferase family TspCOW1_26720 PF00156 Phosphoribosyl transferase domain TspCOW1_26740 PF04055 Radical SAM superfamily TspCOW1_26740 PF06968 Biotin and Thiamin Synthesis associated domain TspCOW1_26750 PF00155 Aminotransferase class I and II TspCOW1_26760 PF12697 Alpha/beta hydrolase family TspCOW1_26770 PF08241 Methyltransferase domain TspCOW1_26800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TspCOW1_26800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TspCOW1_26810 PF00115 Cytochrome C and Quinol oxidase polypeptide I TspCOW1_26830 PF00510 Cytochrome c oxidase subunit III TspCOW1_26850 PF02104 SURF1 family TspCOW1_26870 PF01040 UbiA prenyltransferase family TspCOW1_26880 PF00115 Cytochrome C and Quinol oxidase polypeptide I TspCOW1_26910 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TspCOW1_26910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TspCOW1_26920 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TspCOW1_26920 PF12801 4Fe-4S binding domain TspCOW1_26920 PF13746 4Fe-4S dicluster domain TspCOW1_26940 PF00403 Heavy-metal-associated domain TspCOW1_27070 PF13333 Integrase core domain TspCOW1_27070 PF13276 HTH-like domain TspCOW1_27070 PF00665 Integrase core domain TspCOW1_27110 PF10417 C-terminal domain of 1-Cys peroxiredoxin TspCOW1_27110 PF00578 AhpC/TSA family TspCOW1_27120 PF01206 Sulfurtransferase TusA TspCOW1_27130 PF04143 Sulphur transport TspCOW1_27240 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_27240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_27240 PF00989 PAS fold TspCOW1_27250 PF02954 Bacterial regulatory protein, Fis family TspCOW1_27250 PF00158 Sigma-54 interaction domain TspCOW1_27250 PF00072 Response regulator receiver domain TspCOW1_27280 PF00484 Carbonic anhydrase TspCOW1_27290 PF00313 'Cold-shock' DNA-binding domain TspCOW1_27300 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TspCOW1_27340 PF01625 Peptide methionine sulfoxide reductase TspCOW1_27360 PF03597 Cytochrome oxidase maturation protein cbb3-type TspCOW1_27370 PF00140 Sigma-70 factor, region 1.2 TspCOW1_27370 PF04542 Sigma-70 region 2 TspCOW1_27370 PF04545 Sigma-70, region 4 TspCOW1_27380 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_27380 PF00072 Response regulator receiver domain TspCOW1_27390 PF18075 FtsX extracellular domain TspCOW1_27400 PF00005 ABC transporter TspCOW1_27410 PF00448 SRP54-type protein, GTPase domain TspCOW1_27410 PF02881 SRP54-type protein, helical bundle domain TspCOW1_27420 PF00675 Insulinase (Peptidase family M16) TspCOW1_27420 PF05193 Peptidase M16 inactive domain TspCOW1_27430 PF00675 Insulinase (Peptidase family M16) TspCOW1_27430 PF05193 Peptidase M16 inactive domain TspCOW1_27460 PF01467 Cytidylyltransferase-like TspCOW1_27470 PF00037 4Fe-4S binding domain TspCOW1_27500 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TspCOW1_27500 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TspCOW1_27500 PF06827 Zinc finger found in FPG and IleRS TspCOW1_27510 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_27510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TspCOW1_27550 PF13732 Domain of unknown function (DUF4162) TspCOW1_27550 PF00005 ABC transporter TspCOW1_27560 PF01968 Hydantoinase/oxoprolinase TspCOW1_27560 PF05378 Hydantoinase/oxoprolinase N-terminal region TspCOW1_27570 PF00563 EAL domain TspCOW1_27570 PF08668 HDOD domain TspCOW1_27590 PF00471 Ribosomal protein L33 TspCOW1_27600 PF00830 Ribosomal L28 family TspCOW1_27610 PF04002 RadC-like JAB domain TspCOW1_27620 PF02441 Flavoprotein TspCOW1_27620 PF04127 DNA / pantothenate metabolism flavoprotein TspCOW1_27630 PF00692 dUTPase TspCOW1_27640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TspCOW1_27640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TspCOW1_27640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TspCOW1_27640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TspCOW1_27650 PF00696 Amino acid kinase family TspCOW1_27680 PF00156 Phosphoribosyl transferase domain TspCOW1_27690 PF03372 Endonuclease/Exonuclease/phosphatase family TspCOW1_27730 PF02594 Uncharacterised ACR, YggU family COG1872 TspCOW1_27740 PF02325 YGGT family TspCOW1_27750 PF14748 Pyrroline-5-carboxylate reductase dimerisation TspCOW1_27750 PF03807 NADP oxidoreductase coenzyme F420-dependent TspCOW1_27760 PF01168 Alanine racemase, N-terminal domain TspCOW1_27770 PF00437 Type II/IV secretion system protein TspCOW1_27780 PF00437 Type II/IV secretion system protein TspCOW1_27800 PF00970 Oxidoreductase FAD-binding domain TspCOW1_27800 PF00175 Oxidoreductase NAD-binding domain TspCOW1_27800 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TspCOW1_27810 PF01979 Amidohydrolase family TspCOW1_27820 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TspCOW1_27820 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TspCOW1_27830 PF00156 Phosphoribosyl transferase domain TspCOW1_27840 PF03652 Holliday junction resolvase TspCOW1_27850 PF02622 Uncharacterized ACR, COG1678 TspCOW1_27890 PF02424 ApbE family TspCOW1_27900 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TspCOW1_27900 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TspCOW1_27920 PF00072 Response regulator receiver domain TspCOW1_27930 PF00072 Response regulator receiver domain TspCOW1_27940 PF01584 CheW-like domain TspCOW1_27950 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TspCOW1_27950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TspCOW1_27960 PF03705 CheR methyltransferase, all-alpha domain TspCOW1_27960 PF01739 CheR methyltransferase, SAM binding domain TspCOW1_27970 PF01584 CheW-like domain TspCOW1_27970 PF00072 Response regulator receiver domain TspCOW1_27970 PF02895 Signal transducing histidine kinase, homodimeric domain TspCOW1_27970 PF01627 Hpt domain TspCOW1_27970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_27980 PF00072 Response regulator receiver domain TspCOW1_27980 PF01339 CheB methylesterase TspCOW1_28000 PF00939 Sodium:sulfate symporter transmembrane region TspCOW1_28020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_28020 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_28020 PF08448 PAS fold TspCOW1_28020 PF00072 Response regulator receiver domain TspCOW1_28020 PF13188 PAS domain TspCOW1_28030 PF00072 Response regulator receiver domain TspCOW1_28030 PF02954 Bacterial regulatory protein, Fis family TspCOW1_28030 PF00158 Sigma-54 interaction domain TspCOW1_28050 PF04452 RNA methyltransferase TspCOW1_28060 PF02219 Methylenetetrahydrofolate reductase TspCOW1_28070 PF05221 S-adenosyl-L-homocysteine hydrolase TspCOW1_28070 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TspCOW1_28080 PF02772 S-adenosylmethionine synthetase, central domain TspCOW1_28080 PF02773 S-adenosylmethionine synthetase, C-terminal domain TspCOW1_28080 PF00438 S-adenosylmethionine synthetase, N-terminal domain TspCOW1_28110 PF02780 Transketolase, C-terminal domain TspCOW1_28110 PF02779 Transketolase, pyrimidine binding domain TspCOW1_28110 PF00456 Transketolase, thiamine diphosphate binding domain TspCOW1_28120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TspCOW1_28120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TspCOW1_28130 PF00162 Phosphoglycerate kinase TspCOW1_28140 PF02887 Pyruvate kinase, alpha/beta domain TspCOW1_28140 PF00224 Pyruvate kinase, barrel domain TspCOW1_28150 PF01116 Fructose-bisphosphate aldolase class-II TspCOW1_28180 PF00999 Sodium/hydrogen exchanger family TspCOW1_28200 PF01636 Phosphotransferase enzyme family TspCOW1_28210 PF03459 TOBE domain TspCOW1_28210 PF00005 ABC transporter TspCOW1_28220 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_28250 PF01740 STAS domain TspCOW1_28250 PF00916 Sulfate permease family TspCOW1_28270 PF01966 HD domain TspCOW1_28270 PF11871 Domain of unknown function (DUF3391) TspCOW1_28310 PF00011 Hsp20/alpha crystallin family TspCOW1_28330 PF00226 DnaJ domain TspCOW1_28330 PF01556 DnaJ C terminal domain TspCOW1_28340 PF00011 Hsp20/alpha crystallin family TspCOW1_28360 PF00317 Ribonucleotide reductase, all-alpha domain TspCOW1_28360 PF02867 Ribonucleotide reductase, barrel domain TspCOW1_28360 PF03477 ATP cone domain TspCOW1_28410 PF01471 Putative peptidoglycan binding domain TspCOW1_28410 PF13401 AAA domain TspCOW1_28460 PF00294 pfkB family carbohydrate kinase TspCOW1_28490 PF04493 Endonuclease V TspCOW1_28510 PF05099 Tellurite resistance protein TerB TspCOW1_28510 PF00226 DnaJ domain TspCOW1_28540 PF00834 Ribulose-phosphate 3 epimerase family TspCOW1_28550 PF13419 Haloacid dehalogenase-like hydrolase TspCOW1_28560 PF04715 Anthranilate synthase component I, N terminal region TspCOW1_28560 PF00425 chorismate binding enzyme TspCOW1_28570 PF00117 Glutamine amidotransferase class-I TspCOW1_28580 PF02885 Glycosyl transferase family, helical bundle domain TspCOW1_28580 PF00591 Glycosyl transferase family, a/b domain TspCOW1_28590 PF00218 Indole-3-glycerol phosphate synthase TspCOW1_28600 PF00027 Cyclic nucleotide-binding domain TspCOW1_28600 PF13545 Crp-like helix-turn-helix domain TspCOW1_28610 PF02566 OsmC-like protein TspCOW1_28630 PF02675 S-adenosylmethionine decarboxylase TspCOW1_28640 PF03232 Ubiquinone biosynthesis protein COQ7 TspCOW1_28660 PF00572 Ribosomal protein L13 TspCOW1_28670 PF00380 Ribosomal protein S9/S16 TspCOW1_28680 PF03922 OmpW family TspCOW1_28690 PF13609 Gram-negative porin TspCOW1_28700 PF02754 Cysteine-rich domain TspCOW1_28700 PF13183 4Fe-4S dicluster domain TspCOW1_28710 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TspCOW1_28720 PF00585 C-terminal regulatory domain of Threonine dehydratase TspCOW1_28720 PF00291 Pyridoxal-phosphate dependent enzyme TspCOW1_28750 PF01812 5-formyltetrahydrofolate cyclo-ligase family TspCOW1_28760 PF05164 Cell division protein ZapA TspCOW1_28780 PF03695 Uncharacterised protein family (UPF0149) TspCOW1_28790 PF05195 Aminopeptidase P, N-terminal domain TspCOW1_28790 PF00557 Metallopeptidase family M24 TspCOW1_28800 PF01494 FAD binding domain TspCOW1_28810 PF01494 FAD binding domain TspCOW1_28830 PF08669 Glycine cleavage T-protein C-terminal barrel domain TspCOW1_28830 PF01571 Aminomethyltransferase folate-binding domain TspCOW1_28840 PF01597 Glycine cleavage H-protein TspCOW1_28850 PF02347 Glycine cleavage system P-protein TspCOW1_28860 PF08534 Redoxin TspCOW1_28870 PF02347 Glycine cleavage system P-protein TspCOW1_28880 PF01219 Prokaryotic diacylglycerol kinase TspCOW1_28890 PF00294 pfkB family carbohydrate kinase TspCOW1_28900 PF00563 EAL domain TspCOW1_28900 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_28900 PF03707 Bacterial signalling protein N terminal repeat TspCOW1_28920 PF13977 BetI-type transcriptional repressor, C-terminal TspCOW1_28920 PF00440 Bacterial regulatory proteins, tetR family TspCOW1_28930 PF01206 Sulfurtransferase TusA TspCOW1_28940 PF08274 PhnA Zinc-Ribbon TspCOW1_28940 PF03831 PhnA domain TspCOW1_28950 PF03190 Protein of unknown function, DUF255 TspCOW1_28960 PF00535 Glycosyl transferase family 2 TspCOW1_28980 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase TspCOW1_29000 PF17785 PUA-like domain TspCOW1_29000 PF10672 S-adenosylmethionine-dependent methyltransferase TspCOW1_29010 PF01790 Prolipoprotein diacylglyceryl transferase TspCOW1_29020 PF00303 Thymidylate synthase TspCOW1_29030 PF00186 Dihydrofolate reductase TspCOW1_29050 PF00149 Calcineurin-like phosphoesterase TspCOW1_29060 PF04379 ApaG domain TspCOW1_29070 PF02685 Glucokinase TspCOW1_29080 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TspCOW1_29110 PF00582 Universal stress protein family TspCOW1_29130 PF00398 Ribosomal RNA adenine dimethylase TspCOW1_29140 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TspCOW1_29150 PF09312 SurA N-terminal domain TspCOW1_29150 PF00639 PPIC-type PPIASE domain TspCOW1_29160 PF03968 OstA-like protein TspCOW1_29160 PF04453 LPS transport system D TspCOW1_29180 PF00873 AcrB/AcrD/AcrF family TspCOW1_29190 PF01636 Phosphotransferase enzyme family TspCOW1_29200 PF00483 Nucleotidyl transferase TspCOW1_29250 PF00873 AcrB/AcrD/AcrF family TspCOW1_29260 PF13533 Biotin-lipoyl like TspCOW1_29310 PF04055 Radical SAM superfamily TspCOW1_29320 PF03099 Biotin/lipoate A/B protein ligase family TspCOW1_29330 PF04359 Protein of unknown function (DUF493) TspCOW1_29370 PF00873 AcrB/AcrD/AcrF family TspCOW1_29380 PF01063 Amino-transferase class IV TspCOW1_29390 PF07943 Penicillin-binding protein 5, C-terminal domain TspCOW1_29390 PF00768 D-alanyl-D-alanine carboxypeptidase TspCOW1_29400 PF03330 Lytic transglycolase TspCOW1_29400 PF05036 Sporulation related domain TspCOW1_29410 PF13406 Transglycosylase SLT domain TspCOW1_29420 PF01098 Cell cycle protein TspCOW1_29430 PF03717 Penicillin-binding Protein dimerisation domain TspCOW1_29430 PF00905 Penicillin binding protein transpeptidase domain TspCOW1_29440 PF04093 rod shape-determining protein MreD TspCOW1_29450 PF04085 rod shape-determining protein MreC TspCOW1_29470 PF02686 Glu-tRNAGln amidotransferase C subunit TspCOW1_29480 PF01425 Amidase TspCOW1_29490 PF02637 GatB domain TspCOW1_29490 PF02934 GatB/GatE catalytic domain TspCOW1_29510 PF05166 YcgL domain TspCOW1_29510 PF05116 Sucrose-6F-phosphate phosphohydrolase TspCOW1_29520 PF09997 Predicted membrane protein (DUF2238) TspCOW1_29540 PF00899 ThiF family TspCOW1_29560 PF17827 PrmC N-terminal domain TspCOW1_29560 PF13847 Methyltransferase domain TspCOW1_29570 PF00472 RF-1 domain TspCOW1_29570 PF03462 PCRF domain TspCOW1_29580 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TspCOW1_29580 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TspCOW1_29580 PF01488 Shikimate / quinate 5-dehydrogenase TspCOW1_29600 PF03550 Outer membrane lipoprotein LolB TspCOW1_29610 PF00288 GHMP kinases N terminal domain TspCOW1_29610 PF08544 GHMP kinases C terminal TspCOW1_29620 PF14572 Phosphoribosyl synthetase-associated domain TspCOW1_29620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TspCOW1_29630 PF01386 Ribosomal L25p family TspCOW1_29630 PF14693 Ribosomal protein TL5, C-terminal domain TspCOW1_29640 PF01195 Peptidyl-tRNA hydrolase TspCOW1_29650 PF01926 50S ribosome-binding GTPase TspCOW1_29650 PF06071 Protein of unknown function (DUF933) TspCOW1_29860 PF13356 Arm DNA-binding domain TspCOW1_29860 PF00589 Phage integrase family TspCOW1_29870 PF00266 Aminotransferase class-V TspCOW1_29890 PF08241 Methyltransferase domain TspCOW1_29910 PF00873 AcrB/AcrD/AcrF family TspCOW1_29920 PF02028 BCCT, betaine/carnitine/choline family transporter TspCOW1_29930 PF13344 Haloacid dehalogenase-like hydrolase TspCOW1_30030 PF01867 CRISPR associated protein Cas1 TspCOW1_30030 PF01930 Domain of unknown function DUF83 TspCOW1_30040 PF09827 CRISPR associated protein Cas2 TspCOW1_30050 PF00072 Response regulator receiver domain TspCOW1_30050 PF02954 Bacterial regulatory protein, Fis family TspCOW1_30050 PF00158 Sigma-54 interaction domain TspCOW1_30070 PF00115 Cytochrome C and Quinol oxidase polypeptide I TspCOW1_30120 PF03190 Protein of unknown function, DUF255 TspCOW1_30150 PF17176 tRNA-binding domain TspCOW1_30150 PF05127 Helicase TspCOW1_30150 PF13718 GNAT acetyltransferase 2 TspCOW1_30150 PF08351 Domain of unknown function (DUF1726) TspCOW1_30180 PF11700 Vacuole effluxer Atg22 like TspCOW1_30200 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TspCOW1_30200 PF00270 DEAD/DEAH box helicase TspCOW1_30200 PF00271 Helicase conserved C-terminal domain TspCOW1_30200 PF11898 Domain of unknown function (DUF3418) TspCOW1_30200 PF04408 Helicase associated domain (HA2) TspCOW1_30230 PF00109 Beta-ketoacyl synthase, N-terminal domain TspCOW1_30230 PF02801 Beta-ketoacyl synthase, C-terminal domain TspCOW1_30240 PF07977 FabA-like domain TspCOW1_30250 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_30250 PF00072 Response regulator receiver domain TspCOW1_30260 PF00535 Glycosyl transferase family 2 TspCOW1_30300 PF03631 Virulence factor BrkB TspCOW1_30330 PF00578 AhpC/TSA family TspCOW1_30350 PF00679 Elongation factor G C-terminus TspCOW1_30350 PF03144 Elongation factor Tu domain 2 TspCOW1_30350 PF00009 Elongation factor Tu GTP binding domain TspCOW1_30360 PF01894 Uncharacterised protein family UPF0047 TspCOW1_30370 PF07685 CobB/CobQ-like glutamine amidotransferase domain TspCOW1_30370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TspCOW1_30380 PF01497 Periplasmic binding protein TspCOW1_30390 PF01923 Cobalamin adenosyltransferase TspCOW1_30400 PF03544 Gram-negative bacterial TonB protein C-terminal TspCOW1_30410 PF07715 TonB-dependent Receptor Plug Domain TspCOW1_30410 PF00593 TonB dependent receptor TspCOW1_30440 PF00005 ABC transporter TspCOW1_30450 PF01032 FecCD transport family TspCOW1_30470 PF00293 NUDIX domain TspCOW1_30480 PF02896 PEP-utilising enzyme, TIM barrel domain TspCOW1_30480 PF00391 PEP-utilising enzyme, mobile domain TspCOW1_30480 PF05524 PEP-utilising enzyme, N-terminal TspCOW1_30480 PF01590 GAF domain TspCOW1_30500 PF00210 Ferritin-like domain TspCOW1_30520 PF03653 Uncharacterised protein family (UPF0093) TspCOW1_30530 PF00578 AhpC/TSA family TspCOW1_30550 PF00654 Voltage gated chloride channel TspCOW1_30560 PF01118 Semialdehyde dehydrogenase, NAD binding domain TspCOW1_30560 PF02774 Semialdehyde dehydrogenase, dimerisation domain TspCOW1_30590 PF01521 Iron-sulphur cluster biosynthesis TspCOW1_30600 PF00285 Citrate synthase, C-terminal domain TspCOW1_30610 PF03702 Anhydro-N-acetylmuramic acid kinase TspCOW1_30620 PF04225 Opacity-associated protein A LysM-like domain TspCOW1_30620 PF01551 Peptidase family M23 TspCOW1_30630 PF01479 S4 domain TspCOW1_30630 PF00579 tRNA synthetases class I (W and Y) TspCOW1_30660 PF02237 Biotin protein ligase C terminal domain TspCOW1_30660 PF03099 Biotin/lipoate A/B protein ligase family TspCOW1_30660 PF08279 HTH domain TspCOW1_30670 PF03309 Type III pantothenate kinase TspCOW1_30700 PF17131 Outer membrane lipoprotein-sorting protein TspCOW1_30710 PF00717 Peptidase S24-like TspCOW1_30710 PF01726 LexA DNA binding domain TspCOW1_30740 PF00909 Ammonium Transporter Family TspCOW1_30750 PF00892 EamA-like transporter family TspCOW1_30770 PF00550 Phosphopantetheine attachment site TspCOW1_30770 PF00109 Beta-ketoacyl synthase, N-terminal domain TspCOW1_30770 PF14765 Polyketide synthase dehydratase TspCOW1_30770 PF02801 Beta-ketoacyl synthase, C-terminal domain TspCOW1_30770 PF08659 KR domain TspCOW1_30770 PF00698 Acyl transferase domain TspCOW1_30770 PF08240 Alcohol dehydrogenase GroES-like domain TspCOW1_30770 PF00107 Zinc-binding dehydrogenase TspCOW1_30770 PF16197 Ketoacyl-synthetase C-terminal extension TspCOW1_30780 PF04298 Putative neutral zinc metallopeptidase TspCOW1_30790 PF00293 NUDIX domain TspCOW1_30790 PF09297 NADH pyrophosphatase zinc ribbon domain TspCOW1_30810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TspCOW1_30810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TspCOW1_30810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TspCOW1_30820 PF00009 Elongation factor Tu GTP binding domain TspCOW1_30820 PF03144 Elongation factor Tu domain 2 TspCOW1_30820 PF03143 Elongation factor Tu C-terminal domain TspCOW1_30830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TspCOW1_30840 PF02357 Transcription termination factor nusG TspCOW1_30840 PF00467 KOW motif TspCOW1_30850 PF03946 Ribosomal protein L11, N-terminal domain TspCOW1_30850 PF00298 Ribosomal protein L11, RNA binding domain TspCOW1_30860 PF00687 Ribosomal protein L1p/L10e family TspCOW1_30870 PF00466 Ribosomal protein L10 TspCOW1_30880 PF16320 Ribosomal protein L7/L12 dimerisation domain TspCOW1_30880 PF00542 Ribosomal protein L7/L12 C-terminal domain TspCOW1_30890 PF04561 RNA polymerase Rpb2, domain 2 TspCOW1_30890 PF04560 RNA polymerase Rpb2, domain 7 TspCOW1_30890 PF00562 RNA polymerase Rpb2, domain 6 TspCOW1_30890 PF04565 RNA polymerase Rpb2, domain 3 TspCOW1_30890 PF10385 RNA polymerase beta subunit external 1 domain TspCOW1_30890 PF04563 RNA polymerase beta subunit TspCOW1_30900 PF04997 RNA polymerase Rpb1, domain 1 TspCOW1_30900 PF04983 RNA polymerase Rpb1, domain 3 TspCOW1_30900 PF05000 RNA polymerase Rpb1, domain 4 TspCOW1_30900 PF04998 RNA polymerase Rpb1, domain 5 TspCOW1_30900 PF00623 RNA polymerase Rpb1, domain 2 TspCOW1_30910 PF00164 Ribosomal protein S12/S23 TspCOW1_30920 PF00177 Ribosomal protein S7p/S5e TspCOW1_30930 PF00009 Elongation factor Tu GTP binding domain TspCOW1_30930 PF03144 Elongation factor Tu domain 2 TspCOW1_30930 PF00679 Elongation factor G C-terminus TspCOW1_30930 PF14492 Elongation Factor G, domain II TspCOW1_30930 PF03764 Elongation factor G, domain IV TspCOW1_30940 PF03144 Elongation factor Tu domain 2 TspCOW1_30940 PF03143 Elongation factor Tu C-terminal domain TspCOW1_30940 PF00009 Elongation factor Tu GTP binding domain TspCOW1_30950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TspCOW1_30960 PF00467 KOW motif TspCOW1_30960 PF02357 Transcription termination factor nusG TspCOW1_30970 PF03946 Ribosomal protein L11, N-terminal domain TspCOW1_30970 PF00298 Ribosomal protein L11, RNA binding domain TspCOW1_30980 PF00687 Ribosomal protein L1p/L10e family TspCOW1_30990 PF00466 Ribosomal protein L10 TspCOW1_31000 PF16320 Ribosomal protein L7/L12 dimerisation domain TspCOW1_31000 PF00542 Ribosomal protein L7/L12 C-terminal domain TspCOW1_31010 PF04563 RNA polymerase beta subunit TspCOW1_31010 PF04561 RNA polymerase Rpb2, domain 2 TspCOW1_31010 PF04565 RNA polymerase Rpb2, domain 3 TspCOW1_31010 PF10385 RNA polymerase beta subunit external 1 domain TspCOW1_31010 PF00562 RNA polymerase Rpb2, domain 6 TspCOW1_31010 PF04560 RNA polymerase Rpb2, domain 7 TspCOW1_31020 PF04997 RNA polymerase Rpb1, domain 1 TspCOW1_31020 PF00623 RNA polymerase Rpb1, domain 2 TspCOW1_31020 PF04983 RNA polymerase Rpb1, domain 3 TspCOW1_31020 PF05000 RNA polymerase Rpb1, domain 4 TspCOW1_31020 PF04998 RNA polymerase Rpb1, domain 5 TspCOW1_31030 PF00164 Ribosomal protein S12/S23 TspCOW1_31040 PF00177 Ribosomal protein S7p/S5e TspCOW1_31050 PF00009 Elongation factor Tu GTP binding domain TspCOW1_31050 PF00679 Elongation factor G C-terminus TspCOW1_31050 PF03764 Elongation factor G, domain IV TspCOW1_31050 PF03144 Elongation factor Tu domain 2 TspCOW1_31050 PF14492 Elongation Factor G, domain II TspCOW1_31060 PF00009 Elongation factor Tu GTP binding domain TspCOW1_31060 PF03144 Elongation factor Tu domain 2 TspCOW1_31060 PF03143 Elongation factor Tu C-terminal domain TspCOW1_31070 PF00338 Ribosomal protein S10p/S20e TspCOW1_31080 PF00297 Ribosomal protein L3 TspCOW1_31090 PF00573 Ribosomal protein L4/L1 family TspCOW1_31100 PF00276 Ribosomal protein L23 TspCOW1_31110 PF03947 Ribosomal Proteins L2, C-terminal domain TspCOW1_31110 PF00181 Ribosomal Proteins L2, RNA binding domain TspCOW1_31120 PF00203 Ribosomal protein S19 TspCOW1_31130 PF00237 Ribosomal protein L22p/L17e TspCOW1_31140 PF00189 Ribosomal protein S3, C-terminal domain TspCOW1_31140 PF07650 KH domain TspCOW1_31150 PF00252 Ribosomal protein L16p/L10e TspCOW1_31160 PF00831 Ribosomal L29 protein TspCOW1_31170 PF00366 Ribosomal protein S17 TspCOW1_31180 PF00238 Ribosomal protein L14p/L23e TspCOW1_31190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TspCOW1_31190 PF00467 KOW motif TspCOW1_31200 PF00673 ribosomal L5P family C-terminus TspCOW1_31200 PF00281 Ribosomal protein L5 TspCOW1_31210 PF00253 Ribosomal protein S14p/S29e TspCOW1_31220 PF00410 Ribosomal protein S8 TspCOW1_31230 PF00347 Ribosomal protein L6 TspCOW1_31240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TspCOW1_31250 PF00333 Ribosomal protein S5, N-terminal domain TspCOW1_31250 PF03719 Ribosomal protein S5, C-terminal domain TspCOW1_31260 PF00327 Ribosomal protein L30p/L7e TspCOW1_31270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TspCOW1_31280 PF00344 SecY translocase TspCOW1_31290 PF00416 Ribosomal protein S13/S18 TspCOW1_31300 PF00411 Ribosomal protein S11 TspCOW1_31310 PF00163 Ribosomal protein S4/S9 N-terminal domain TspCOW1_31310 PF01479 S4 domain TspCOW1_31320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TspCOW1_31320 PF01000 RNA polymerase Rpb3/RpoA insert domain TspCOW1_31320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TspCOW1_31330 PF01196 Ribosomal protein L17 TspCOW1_31350 PF17755 UvrA DNA-binding domain TspCOW1_31350 PF17760 UvrA interaction domain TspCOW1_31350 PF00005 ABC transporter TspCOW1_31360 PF07690 Major Facilitator Superfamily TspCOW1_31370 PF00436 Single-strand binding protein family TspCOW1_31390 PF02381 MraZ protein, putative antitoxin-like TspCOW1_31400 PF01795 MraW methylase family TspCOW1_31410 PF04999 Cell division protein FtsL TspCOW1_31420 PF00905 Penicillin binding protein transpeptidase domain TspCOW1_31420 PF03717 Penicillin-binding Protein dimerisation domain TspCOW1_31430 PF01225 Mur ligase family, catalytic domain TspCOW1_31430 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_31430 PF08245 Mur ligase middle domain TspCOW1_31440 PF08245 Mur ligase middle domain TspCOW1_31440 PF01225 Mur ligase family, catalytic domain TspCOW1_31440 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_31450 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TspCOW1_31450 PF00953 Glycosyl transferase family 4 TspCOW1_31460 PF08245 Mur ligase middle domain TspCOW1_31460 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_31470 PF01098 Cell cycle protein TspCOW1_31480 PF03033 Glycosyltransferase family 28 N-terminal domain TspCOW1_31480 PF04101 Glycosyltransferase family 28 C-terminal domain TspCOW1_31490 PF08245 Mur ligase middle domain TspCOW1_31490 PF01225 Mur ligase family, catalytic domain TspCOW1_31490 PF02875 Mur ligase family, glutamate ligase domain TspCOW1_31510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TspCOW1_31510 PF01565 FAD binding domain TspCOW1_31520 PF01820 D-ala D-ala ligase N-terminus TspCOW1_31520 PF07478 D-ala D-ala ligase C-terminus TspCOW1_31530 PF03799 Cell division protein FtsQ TspCOW1_31530 PF08478 POTRA domain, FtsQ-type TspCOW1_31540 PF02491 SHS2 domain inserted in FTSA TspCOW1_31550 PF12327 FtsZ family, C-terminal domain TspCOW1_31550 PF00091 Tubulin/FtsZ family, GTPase domain TspCOW1_31560 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TspCOW1_31580 PF01551 Peptidase family M23 TspCOW1_31580 PF08525 Opacity-associated protein A N-terminal motif TspCOW1_31580 PF01476 LysM domain TspCOW1_31590 PF07516 SecA Wing and Scaffold domain TspCOW1_31590 PF01043 SecA preprotein cross-linking domain TspCOW1_31590 PF07517 SecA DEAD-like domain TspCOW1_31590 PF02810 SEC-C motif TspCOW1_31600 PF01960 ArgJ family TspCOW1_31610 PF00293 NUDIX domain TspCOW1_31630 PF03884 DNA gyrase inhibitor YacG TspCOW1_31640 PF07072 Cell division protein TspCOW1_31650 PF01121 Dephospho-CoA kinase TspCOW1_31660 PF06750 Bacterial Peptidase A24 N-terminal domain TspCOW1_31660 PF01478 Type IV leader peptidase family TspCOW1_31670 PF00482 Type II secretion system (T2SS), protein F TspCOW1_31680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TspCOW1_31680 PF00437 Type II/IV secretion system protein TspCOW1_31710 PF13439 Glycosyltransferase Family 4 TspCOW1_31710 PF00534 Glycosyl transferases group 1 TspCOW1_31760 PF00114 Pilin (bacterial filament) TspCOW1_31760 PF07963 Prokaryotic N-terminal methylation motif TspCOW1_31770 PF02954 Bacterial regulatory protein, Fis family TspCOW1_31770 PF00072 Response regulator receiver domain TspCOW1_31770 PF00158 Sigma-54 interaction domain TspCOW1_31780 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_31780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_31800 PF08442 ATP-grasp domain TspCOW1_31800 PF00549 CoA-ligase TspCOW1_31810 PF02629 CoA binding domain TspCOW1_31810 PF00549 CoA-ligase TspCOW1_31820 PF00795 Carbon-nitrogen hydrolase TspCOW1_31820 PF02540 NAD synthase TspCOW1_31830 PF00543 Nitrogen regulatory protein P-II TspCOW1_31840 PF13525 Outer membrane lipoprotein TspCOW1_31850 PF01479 S4 domain TspCOW1_31850 PF00849 RNA pseudouridylate synthase TspCOW1_31860 PF02578 Multi-copper polyphenol oxidoreductase laccase TspCOW1_31890 PF01327 Polypeptide deformylase TspCOW1_31910 PF00004 ATPase family associated with various cellular activities (AAA) TspCOW1_31910 PF17871 AAA lid domain TspCOW1_31910 PF02861 Clp amino terminal domain, pathogenicity island component TspCOW1_31910 PF10431 C-terminal, D2-small domain, of ClpB protein TspCOW1_31910 PF07724 AAA domain (Cdc48 subfamily) TspCOW1_31940 PF00106 short chain dehydrogenase TspCOW1_31960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TspCOW1_31960 PF14572 Phosphoribosyl synthetase-associated domain TspCOW1_31970 PF02885 Glycosyl transferase family, helical bundle domain TspCOW1_31970 PF00591 Glycosyl transferase family, a/b domain TspCOW1_31970 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TspCOW1_31980 PF01618 MotA/TolQ/ExbB proton channel family TspCOW1_31990 PF13677 Membrane MotB of proton-channel complex MotA/MotB TspCOW1_31990 PF00691 OmpA family TspCOW1_32030 PF04542 Sigma-70 region 2 TspCOW1_32030 PF08281 Sigma-70, region 4 TspCOW1_32050 PF00005 ABC transporter TspCOW1_32050 PF00664 ABC transporter transmembrane region TspCOW1_32080 PF02938 GAD domain TspCOW1_32080 PF00152 tRNA synthetases class II (D, K and N) TspCOW1_32080 PF01336 OB-fold nucleic acid binding domain TspCOW1_32090 PF03129 Anticodon binding domain TspCOW1_32090 PF04073 Aminoacyl-tRNA editing domain TspCOW1_32090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TspCOW1_32110 PF00205 Thiamine pyrophosphate enzyme, central domain TspCOW1_32110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TspCOW1_32110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TspCOW1_32120 PF10369 Small subunit of acetolactate synthase TspCOW1_32130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TspCOW1_32130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TspCOW1_32150 PF02666 Phosphatidylserine decarboxylase TspCOW1_32160 PF01066 CDP-alcohol phosphatidyltransferase TspCOW1_32170 PF00072 Response regulator receiver domain TspCOW1_32220 PF00682 HMGL-like TspCOW1_32220 PF08502 LeuA allosteric (dimerisation) domain TspCOW1_32230 PF03167 Uracil DNA glycosylase superfamily TspCOW1_32250 PF16658 Class II release factor RF3, C-terminal domain TspCOW1_32250 PF00009 Elongation factor Tu GTP binding domain TspCOW1_32250 PF03144 Elongation factor Tu domain 2 TspCOW1_32260 PF00483 Nucleotidyl transferase TspCOW1_32310 PF00762 Ferrochelatase TspCOW1_32320 PF00072 Response regulator receiver domain TspCOW1_32330 PF08264 Anticodon-binding domain of tRNA TspCOW1_32330 PF10458 Valyl tRNA synthetase tRNA binding arm TspCOW1_32330 PF00133 tRNA synthetases class I (I, L, M and V) TspCOW1_32350 PF00883 Cytosol aminopeptidase family, catalytic domain TspCOW1_32350 PF02789 Cytosol aminopeptidase family, N-terminal domain TspCOW1_32360 PF03739 Lipopolysaccharide export system permease LptF/LptG TspCOW1_32370 PF03739 Lipopolysaccharide export system permease LptF/LptG TspCOW1_32380 PF06271 RDD family TspCOW1_32420 PF12627 Probable RNA and SrmB- binding site of polymerase A TspCOW1_32420 PF01743 Poly A polymerase head domain TspCOW1_32420 PF12626 Polymerase A arginine-rich C-terminus TspCOW1_32430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TspCOW1_32440 PF17864 RuvB AAA lid domain TspCOW1_32440 PF05491 RuvB C-terminal winged helix domain TspCOW1_32440 PF05496 Holliday junction DNA helicase RuvB P-loop domain TspCOW1_32450 PF02548 Ketopantoate hydroxymethyltransferase TspCOW1_32460 PF02569 Pantoate-beta-alanine ligase TspCOW1_32470 PF02261 Aspartate decarboxylase TspCOW1_32500 PF00072 Response regulator receiver domain TspCOW1_32500 PF00486 Transcriptional regulatory protein, C terminal TspCOW1_32510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_32530 PF00929 Exonuclease TspCOW1_32550 PF01979 Amidohydrolase family TspCOW1_32560 PF00676 Dehydrogenase E1 component TspCOW1_32570 PF02780 Transketolase, C-terminal domain TspCOW1_32570 PF02779 Transketolase, pyrimidine binding domain TspCOW1_32570 PF00364 Biotin-requiring enzyme TspCOW1_32580 PF07992 Pyridine nucleotide-disulphide oxidoreductase TspCOW1_32580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TspCOW1_32600 PF00764 Arginosuccinate synthase TspCOW1_32610 PF13090 Polyphosphate kinase C-terminal domain 2 TspCOW1_32610 PF02503 Polyphosphate kinase middle domain TspCOW1_32610 PF17941 Polyphosphate kinase C-terminal domain 1 TspCOW1_32610 PF13089 Polyphosphate kinase N-terminal domain TspCOW1_32620 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_32630 PF00528 Binding-protein-dependent transport system inner membrane component TspCOW1_32640 PF00005 ABC transporter TspCOW1_32650 PF01895 PhoU domain TspCOW1_32660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TspCOW1_32660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TspCOW1_32670 PF00202 Aminotransferase class-III TspCOW1_32710 PF13537 Glutamine amidotransferase domain TspCOW1_32710 PF00733 Asparagine synthase TspCOW1_32720 PF00462 Glutaredoxin TspCOW1_32730 PF17820 PDZ domain TspCOW1_32730 PF13180 PDZ domain TspCOW1_32740 PF01784 NIF3 (NGG1p interacting factor 3) TspCOW1_32750 PF00355 Rieske [2Fe-2S] domain TspCOW1_32750 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TspCOW1_32760 PF00032 Cytochrome b(C-terminal)/b6/petD TspCOW1_32760 PF00033 Cytochrome b/b6/petB TspCOW1_32770 PF02167 Cytochrome C1 family TspCOW1_32780 PF02798 Glutathione S-transferase, N-terminal domain TspCOW1_32780 PF00043 Glutathione S-transferase, C-terminal domain TspCOW1_32790 PF04386 Stringent starvation protein B TspCOW1_32800 PF13495 Phage integrase, N-terminal SAM-like domain TspCOW1_32800 PF00589 Phage integrase family TspCOW1_32860 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB TspCOW1_32870 PF01381 Helix-turn-helix TspCOW1_32880 PF00893 Small Multidrug Resistance protein TspCOW1_32920 PF01810 LysE type translocator TspCOW1_32960 PF00512 His Kinase A (phospho-acceptor) domain TspCOW1_32960 PF16736 Single Cache-like TspCOW1_32960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_32960 PF00989 PAS fold TspCOW1_32970 PF00563 EAL domain TspCOW1_32970 PF08495 FIST N domain TspCOW1_32970 PF10442 FIST C domain TspCOW1_32970 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_32990 PF04972 BON domain TspCOW1_33000 PF13580 SIS domain TspCOW1_33010 PF02021 Uncharacterised protein family UPF0102 TspCOW1_33030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TspCOW1_33040 PF01136 Peptidase family U32 TspCOW1_33040 PF16325 Peptidase family U32 C-terminal domain TspCOW1_33050 PF08331 Domain of unknown function (DUF1730) TspCOW1_33060 PF03853 YjeF-related protein N-terminus TspCOW1_33060 PF01256 Carbohydrate kinase TspCOW1_33070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TspCOW1_33080 PF01520 N-acetylmuramoyl-L-alanine amidase TspCOW1_33080 PF11741 AMIN domain TspCOW1_33090 PF01119 DNA mismatch repair protein, C-terminal domain TspCOW1_33090 PF08676 MutL C terminal dimerisation domain TspCOW1_33110 PF17209 Hfq protein TspCOW1_33120 PF13167 GTP-binding GTPase N-terminal TspCOW1_33120 PF16360 GTP-binding GTPase Middle Region TspCOW1_33120 PF01926 50S ribosome-binding GTPase TspCOW1_33130 PF01145 SPFH domain / Band 7 family TspCOW1_33130 PF12221 Bacterial membrane protein N terminal TspCOW1_33140 PF01145 SPFH domain / Band 7 family TspCOW1_33160 PF13393 Histidyl-tRNA synthetase TspCOW1_33170 PF00709 Adenylosuccinate synthetase TspCOW1_33190 PF00575 S1 RNA binding domain TspCOW1_33190 PF00773 RNB domain TspCOW1_33190 PF08206 Ribonuclease B OB domain TspCOW1_33190 PF08461 Ribonuclease R winged-helix domain TspCOW1_33190 PF17876 Cold shock domain TspCOW1_33200 PF00691 OmpA family TspCOW1_33200 PF00223 Photosystem I psaA/psaB protein TspCOW1_33210 PF08032 RNA 2'-O ribose methyltransferase substrate binding TspCOW1_33210 PF00588 SpoU rRNA Methylase family TspCOW1_33220 PF01250 Ribosomal protein S6 TspCOW1_33230 PF00436 Single-strand binding protein family TspCOW1_33240 PF01084 Ribosomal protein S18 TspCOW1_33260 PF01281 Ribosomal protein L9, N-terminal domain TspCOW1_33260 PF03948 Ribosomal protein L9, C-terminal domain TspCOW1_33270 PF00772 DnaB-like helicase N terminal domain TspCOW1_33270 PF03796 DnaB-like helicase C terminal domain TspCOW1_33280 PF01168 Alanine racemase, N-terminal domain TspCOW1_33280 PF00842 Alanine racemase, C-terminal domain TspCOW1_33310 PF00211 Adenylate and Guanylate cyclase catalytic domain TspCOW1_33330 PF18073 Rubredoxin metal binding domain TspCOW1_33340 PF07238 PilZ domain TspCOW1_33350 PF03471 Transporter associated domain TspCOW1_33350 PF01595 Cyclin M transmembrane N-terminal domain TspCOW1_33350 PF00571 CBS domain TspCOW1_33360 PF01578 Cytochrome C assembly protein TspCOW1_33380 PF02978 Signal peptide binding domain TspCOW1_33380 PF02881 SRP54-type protein, helical bundle domain TspCOW1_33380 PF00448 SRP54-type protein, GTPase domain TspCOW1_33390 PF00886 Ribosomal protein S16 TspCOW1_33400 PF05239 PRC-barrel domain TspCOW1_33400 PF01782 RimM N-terminal domain TspCOW1_33410 PF01746 tRNA (Guanine-1)-methyltransferase TspCOW1_33420 PF01245 Ribosomal protein L19 TspCOW1_33440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TspCOW1_33440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TspCOW1_33450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TspCOW1_33450 PF00183 Hsp90 protein TspCOW1_33460 PF01323 DSBA-like thioredoxin domain TspCOW1_33470 PF01479 S4 domain TspCOW1_33480 PF00582 Universal stress protein family TspCOW1_33490 PF00916 Sulfate permease family TspCOW1_33490 PF01740 STAS domain TspCOW1_33550 PF00990 Diguanylate cyclase, GGDEF domain TspCOW1_33560 PF00085 Thioredoxin