TspCOW1_00050    6122 ..    6142 + -11.8  -3.55524   GAACTGGAGTGAACA            GGCCGGGG ATTCG TCCCGGCC            TTGATTTCGGTCATT  77 29
TspCOW1_00060 NONE
TspCOW1_00070 NONE
        xerD NONE
        dsbC   12321 ..   12349 + -10.9  -3.02511   GCTGTTCGCGCGCCT        GCAGGTTGGCGCC GTC GTCGGCGACCTGC        TGTTCGAGCGCTGAG  62 455
TspCOW1_00130   16848 ..   16867 + -16.4  -5.38958   GGATGCCCGTGGGAA            GGGCGGCC ATGC GGCCGCCC             TTTTTCTTTGTCAGT 100 212
TspCOW1_00240   34602 ..   34617 +  -2.6  -5.19212   CGAAACGAGCACTCA              TC-GCAT GAC ATGCCGA              TTTTTTCATGGTCCT  80 282
TspCOW1_00260   36977 ..   37009 +  -9.9  -3.14132   GCCCCGAGTACGAAT     GTCGCCAGGGTGAC TTGGAT GTC-CCGTGGCGAC      TTCATGAGGGCCGGG  64 13
TspCOW1_00270   38026 ..   38051 + -16.9   -3.1372   GTCGGTCGAGAATGG         CGTCGGCGAGG GTGG CCTCGCCGATG          TATTCGTGCCAGCTC  84 507
TspCOW1_00300   40556 ..   40576 + -13.9  -2.81702   GGCTCACAAACTAAA            GCCCCCGGC TCT GCCGGGGGA            TACTTACTCCTGTTG  76 389
TspCOW1_00310   41402 ..   41420 +    -3  -3.04894   CTAGCCCTGCGATAC             CCGGCC CTGTACA GGCCAG             ATTTTCCACACACTT  43 59
TspCOW1_00320 NONE
        aarF NONE
TspCOW1_00340 NONE
TspCOW1_00350 NONE
TspCOW1_00360 NONE
TspCOW1_00370 NONE
       rsaFb NONE
TspCOW1_00390 NONE
TspCOW1_00400 NONE
TspCOW1_00410 NONE
TspCOW1_00420 NONE
TspCOW1_00430   58083 ..   58093 +  -3.2  -3.85698   ATGGAAACAAACAAA                 CTGC AGG GTAG                 TTTGTCGAGGAGGGA  55 126
TspCOW1_00440   58708 ..   58725 +  -4.7  -3.40073   GCCAGCGTAGCGGCC             TGGCGCG TCAC CTCGCCG              TTGATTGCTGCCAAT  51 316
TspCOW1_00480   62129 ..   62152 +    -6  -4.57073   GTCCGGATCGGGCGC          CTCAAGTTCCG CGC CGGT-CTTGAG          TTTTTGCACCAGGTC  76 67
TspCOW1_00510   64596 ..   64607 +  -7.2  -3.24924   AATACGCTTCTTCTT                GCCG GTAT CGGC                 TCTTCTCGCTGCCGC  56 338
TspCOW1_00560 NONE
TspCOW1_00570   75542 ..   75556 +  -7.8  -3.82083   TGGTCGATTTTCGGG               CTGGTG GCG CACCGG               TTTCGGTTGTGGTCG  68 94
TspCOW1_00580 NONE
TspCOW1_00590 NONE
TspCOW1_00600   79433 ..   79443 +  -8.2  -3.53012   TATCGTAAACCAACG                 GCCC AGA GGGC                 TTTGCGCAGCACCAG  62 468
TspCOW1_00620 NONE
TspCOW1_00630   81807 ..   81841 +  -2.1  -4.20516   GGTTATGGTGCTGCT    TGG-TAGGTCGCGCCG AAGA TGGTGTCGCCTAACCA     TTTCTTGAATGACGG  59 68
TspCOW1_00710   92190 ..   92205 +  -4.6  -3.55761   GCGACGATTGATGTG              GTCGGC AATG GCCTAC               TTTGGCCGCTACCTC  53 30
TspCOW1_00920  114429 ..  114441 +  -6.9   -3.0497   GCTCAGCCAAGCAGA                TCCCG CAT CGGGG                TGTTGCACGTCCTCT  54 230
TspCOW1_00930 NONE
TspCOW1_00940  116983 ..  116999 +  -5.1  -4.48987   GCAGGACCTTTATGG              CGGGT ATCCGTC ACCCG              TTTTGATTGTGAAGA  70 3
TspCOW1_00950 NONE
TspCOW1_00960 NONE
        hadI NONE
TspCOW1_00980  120915 ..  120926 +  -2.2  -3.13522   GACATTTTTTTGGTC                GGTT GTTG AGCC                 TGTTCATGACGCGCT  42 143
TspCOW1_01000  123193 ..  123204 +  -3.6  -3.05384   GATAACTGATGTGCA                CGGT GGTT GCCG                 TTCGGTGGCGGAGAA  45 272
TspCOW1_01010  123394 ..  123404 +  -6.8  -3.08173   AACATGCAGTGACAG                 GCCA GTA TGGC                 TTGGATCAGGTTACT  54 29
TspCOW1_01250  145110 ..  145129 +  -2.8  -4.06419   GTACGGAGTGTCTTT            CCC-GCATG TGC CGTGTAGGG            TTCTTTCTACAACCC  58 448
TspCOW1_01300 NONE
TspCOW1_01310 NONE
TspCOW1_01320  149191 ..  149201 +  -6.8  -3.56092   GCGTGGGCCTCGATC                 GGCA TTT TGCC                 TTTCGGCCGTCGTCG  58 467
TspCOW1_01380  153682 ..  153708 +  -8.7  -3.28712   AGCGTAACCTGACAC        CCCGGCG-GTGC TGCC GCACATGTCGGG         TTATGCCCACCGGGC  63 173
TspCOW1_01390 NONE
        ligT  154826 ..  154854 +  -8.7  -2.62616   GGGGGGATTGTAGGA        TGGGTGCAGGCGC GGA GCGCCGTAACCCA        TCGTCTGGCCGCTCC  57 71
        recA  156317 ..  156346 + -15.1  -3.85698   AGATTTCGCGTAACG       GATATTGCCCGGC TTCG GCCGGGTAATGTC        TTTATGGGAACCGGA 100 165
        recX  156932 ..  156964 +  -4.8  -2.91264   ACATTACCCGTCATC     CCGGTGCAGGCCG GGATCCAG TGGCC-GCAGCGG      TATCTGGATCCCGGC  46 103
        alaS  159756 ..  159780 +  -4.2  -4.70107   GGTTAGAGATTGCCG          CGTCACTTCG TTCCT CGCAATGACG          TTTATTGTTTTCATG  70 95
        lysC  161287 ..  161297 +  -2.4  -4.26461   ATGTTGGCGCAGGCG                 GCCG TAC CGGG                 TTCTTTTGAGTTGCT  62 190
        csrA  161584 ..  161596 + -10.5  -2.79679   CATACTTTACCTCGA                CCGGC CGC GCCGG                TATCCTACGCATCTT  63 67
TspCOW1_t00010  161720 ..  161737 + -14.1  -4.96848   TCCGCCATATAAAAA             GGGCCCC AACC GGGGCCC              TTTTTATATGGCGGA 100 34
TspCOW1_01480  163954 ..  163973 +  -3.4  -3.25223   TGGAGTCAGGAGCCT            GGGTGGCG GCGC CGGCGTCC             TTCGTCCTGTCGCTG  46 104
TspCOW1_01500  166491 ..  166503 +  -3.3  -3.02144   TTTTGTGACGGAGAG                CGGCG ATT TGCTG                TCTTCCGCGCCATCC  43 189
TspCOW1_01510 NONE
TspCOW1_01520  169400 ..  169438 + -22.4   -4.8048   GCCACCCGCAAGGGA   GTGTCGGGCGGGGCCGTG CAA CGCGGCTTCGCCCGGCGC   TTTTTCATGTGCACC 100 67
TspCOW1_01530 NONE
       exbB2 NONE
       exbD2 NONE
TspCOW1_01560 NONE
TspCOW1_01570 NONE
TspCOW1_01580  185608 ..  185630 +  -4.8  -3.30124   CGGTGATGGCCACCG           GGTCGAGG TCGAAAC CCTCCACC           TTCTCCAGCGTACGG  49 116
TspCOW1_t00020  189102 ..  189124 + -13.4  -4.90266   CACCGAAAGTCGAAA           GGCCGCCC CTAACCC GGGCGGCC           TTTTTCGTTCATGGA 100 136
TspCOW1_01620  190250 ..  190279 +  -9.3   -3.3197   ATTTCCTCCTGTGAG       GGTAGCTCGCC ACCCATCC GGCGACCTACC        TTCTCAAGCTGCTCT  61 73
TspCOW1_01720  203441 ..  203454 +  -2.3  -2.81547   TCATGATTGGGAAGA               TAGGG CAAT CCCAA                TGGTTCCTATAGAGA  39 0
TspCOW1_01730  204747 ..  204765 +  -2.3  -3.30243   CATTGCTTGCTGTTC            CG-GGCGC CTGA GCGCGACG             TTATCCGAAATGGGT  44 158
TspCOW1_01740  206933 ..  206962 +  -6.5  -4.06419   TGCCCCAACGCACTG       CGTCGAATATGCT TGAC AGTATGTTGGACG        TTCTTTCTGAACCAG  66 319
TspCOW1_01750 NONE
TspCOW1_01760  208669 ..  208690 +  -4.3  -3.37487   ATAGCTGGGGCTGGT           GATCCCCTC GTCG GTGGCGATC            TCTTTGACGCTGTCG  51 393
TspCOW1_01810 NONE
TspCOW1_01820  213718 ..  213739 + -11.5  -2.53382   CGCCTCGATCAAAGG           CCCAGGACG AAAT CGTCCGGGG            TAGGTTAGGCATGGT  61 465
TspCOW1_01850 NONE
TspCOW1_01860 NONE
TspCOW1_01870 NONE
TspCOW1_01880 NONE
TspCOW1_01890 NONE
TspCOW1_01900 NONE
TspCOW1_01910  219638 ..  219651 +  -2.3  -3.28712   TGCGTGATCTCACGC               CGGAA GACG TACCG                TTCTGAGGGGGCGCG  44 6
TspCOW1_01920 NONE
TspCOW1_01930  222683 ..  222729 +  -4.5  -3.57263   CAATCTGCAAACTGC CTGCAAACTGGAATCGAGGC AAAACAAG GCTTTGCG-CCAGTTTGCAG TTTGCAGGTCCCAGT  53 105
TspCOW1_01940 NONE
TspCOW1_01950 NONE
TspCOW1_01960  224099 ..  224133 +  -7.9  -3.87815   CGCGAGAGAAGTCTA    TG-TGAAGGCTGCGGA TAGT TCCGTGGCCTTCGGCG     TTTCTGGGCCTCCCA  68 151
TspCOW1_01970  226045 ..  226081 +  -8.7  -3.30507   CCTATCGGGGTTCAT    TCGGCGTATTCGTCTTC ACC GAAGGCGAAGGCGGTGA    TCTCTTTGAGTTGCT  63 482
TspCOW1_02010  227088 ..  227113 +  -2.4  -3.07962   AGCTCGGTGACGTGG         CGCCGCGGGT GGATTG ACATGCGCCG          TGTTCGAGTATGACG  41 9
TspCOW1_02020 NONE
TspCOW1_02030 NONE
TspCOW1_02040 NONE
TspCOW1_02050 NONE
TspCOW1_02060 NONE
TspCOW1_02070 NONE
TspCOW1_02080 NONE
TspCOW1_02090 NONE
TspCOW1_02100 NONE
TspCOW1_02110 NONE
TspCOW1_02120 NONE
TspCOW1_02130 NONE
TspCOW1_02140 NONE
TspCOW1_02150 NONE
TspCOW1_02160 NONE
TspCOW1_02170 NONE
TspCOW1_02180 NONE
TspCOW1_02190 NONE
TspCOW1_02200  244243 ..  244253 +  -8.2  -2.63596   GAAGAACCCGTTCAC                 CGGC GAT GCCG                 TGGTGTGAGGTAGCG  53 7
TspCOW1_02210 NONE
TspCOW1_02220 NONE
TspCOW1_02230 NONE
TspCOW1_02240  247279 ..  247300 + -15.9  -3.51232   CTCTCATTATCACCC           GAACCCGCC ATAC GGCGGGTTC            TTCGTTTCCGGAGGA  90 50
TspCOW1_02250 NONE
TspCOW1_02260 NONE
TspCOW1_02270 NONE
TspCOW1_02280 NONE
TspCOW1_02290  249850 ..  249875 +  -4.7   -3.2794   ATAGCCAATAGAGGG         GTTGATTCTTG CTGC CGCGGATCAAC          TTCATCTCGGTCGAC  49 132
TspCOW1_02420  274947 ..  274993 +  -6.9  -3.57462   ATAAGCCGCTCGATT CAGCCTTATTACGCAACTTTATC CAT GA-AAAGTTGCATAATAAG-CGG TTTCCGCCTAGGCTA  60 113
TspCOW1_02430 NONE
TspCOW1_02440 NONE
TspCOW1_02450  277390 ..  277403 +  -2.3  -2.90212   CCACCGGCAAGAATT               CCGTG TGCG CACGA                TGTGTCGGGTGCTGG  40 60
TspCOW1_02460  278384 ..  278397 +  -5.2  -2.72511   GGATGCTGTGAAGTT               CCGC ATAGTC GCGG                CTTTCCAGGAGTCCG  45 182
        rpfF  279661 ..  279686 +  -9.8  -3.56594   CGGGGTTTTCTGGGG         CCACTCCATT CCGCAA AATGGGGTGG          TTTCAACGCATTTCG  69 54
         slp  286103 ..  286113 +  -6.8  -3.52906   GGCGGCCGGTATCCG                 CCAG CAG CTGG                 TATTTCTCCACATAA  58 370
TspCOW1_02540  287975 ..  287995 +  -5.5  -3.92869   AATTTCGCTGCTGAA            TTCCATC GAGACAG GATGGAA            TTTATCCATCAGTCA  61 189
TspCOW1_02550 NONE
TspCOW1_02560  292313 ..  292352 +   -10  -2.74144   AGGTCGGGTTAGCGC  AGCGTAACCCGACAGCGCC GCG GAAG-TGTCGGGTTACGCC  CTTTCGGGCTAACCC  63 51
        azoR  298762 ..  298780 +  -7.3  -3.39288   GAGGAAGCGGGTCTC             CCCGCCC GTTGA GGGAGGG             TGTTATTGGACGGTA  58 119
TspCOW1_02620  300042 ..  300052 +  -6.8  -3.69283   TGTTGATGTCGGCCA                 CCAG CAG CTGG                 TTGTTCAGTCCCTTC  61 359
TspCOW1_02670  306172 ..  306187 +  -8.2  -3.72765   TTACGTAACGGCCAT              TCGGGG CTGT CCCCGG               TTTGCGGTTTGAGTT  66 401
TspCOW1_02680  307839 ..  307849 +  -3.2  -3.07192   CGCATAACCCATGAA                 CTCA CTC TGGG                 TGTATTCGGAAACTT  43 42
TspCOW1_02690  308182 ..  308197 +  -4.6  -3.29511   CATGGGGCTTCCGCC              CGGCTT CAAG ATGCCG               TTCTGAAGCGCTGAC  49 4
        recR NONE
TspCOW1_02720  309530 ..  309540 +  -6.8   -3.4072   GACTCTGCGTCTTTG                 CGCA CTC TGCG                 TTATCCTCACCACTG  58 330
         hit  310073 ..  310097 +  -7.1  -3.14931   GCATTCGCTGCATTT          GCCGACCTG GTACACG CAGGTCGGG          TTAGTACAGCGTAAC  54 156
         orn  314283 ..  314303 +  -6.2  -2.52464   CTTGGCCCGGCACTT           CTCGATCGC CATG GCGATC-AG            TGCCTTCACCGCCGG  45 486
        gdhA NONE
TspCOW1_02810  319362 ..  319395 +  -6.7  -3.58522   TCGGGCAGGCGCTGC     CTGAGGGCCTGCATCA GGG TG-TGCGCGCCCTCAC     TTTCCACATCCTCGT  58 391
TspCOW1_02830  321330 ..  321346 +    -5   -4.2008   CGGTCCGCTCCGCTA              GCCGCG CGCCT CGCGAC              TTTATTCCACTCTGT  64 25
TspCOW1_02840  322103 ..  322116 +  -5.9  -4.62069   GGTTACCGCCTTCAG               TCCGC ATTG GCGGG                TTTTTCCCATACCAG  75 141
TspCOW1_02880 NONE
TspCOW1_02890  327802 ..  327816 +   -10  -3.97057   AGCTGTATATTTTCT               GGAGGT TTT ACCTCC               TTTCGTTGAGTTGTC  80 129
TspCOW1_02900  331150 ..  331197 +  -4.3  -3.55447   GCTGTTCCAGCAGTT CGGGCAGGACCAGGCGCAGTGGC AGGCCG GCCGCTG--CCTGGT-C-GTCCG TTATGTGGTGGATGC  52 441
TspCOW1_02950  336355 ..  336373 +  -5.9  -3.17392   AGAGCCGACGTTGAC             GCGCGAT CCCCA ACCGCGC             TTAAATTGCGCGCTC  51 69
TspCOW1_02960 NONE
TspCOW1_02970  338253 ..  338263 +  -8.2  -3.09933   GGAAGCGGACTGATT                 CCGC TGT GCGG                 TTCGCTGCATTCCCG  57 28
TspCOW1_02980  339114 ..  339138 +  -4.1  -4.35483   TGCGCGCTAGCCGAC          AGCGGACCG TGCAATC CGGCCCGCA          TTTGTTATAGTCAAC  65 31
TspCOW1_02990 NONE
        glgP NONE
TspCOW1_03010 NONE
TspCOW1_03020  343050 ..  343062 +  -5.5  -2.75343   AATAATAATTACTTT                GCGTT CTT AGCGC                CTTTACGCCTCTGCG  47 139
TspCOW1_03030  343590 ..  343623 + -10.1  -3.97368   TACCACTTACGTCAT     CCC-CGCGCAGGCGGG GAT CCAGCCACCGCGAGGG     TTTGTGGATTCCCGC  80 112
      mltF_1  345099 ..  345120 +  -3.6  -3.28712   CTGGAATAGAAACGC           TGCAGCGG GAGTGG CCGGTGCG            TTCTGACCGCCGCCG  47 32
TspCOW1_03050  346050 ..  346064 +  -2.1  -3.56273   GTGTAACGGACAGAC              GG-GGA CCGT TCCGCC               TTCTATACTCATGCA  47 42
TspCOW1_03060 NONE
TspCOW1_03070 NONE
TspCOW1_03080 NONE
TspCOW1_03090  350608 ..  350629 + -11.5  -2.82516   TGGAAGAACAGCACG           TCGCCCGGC TCCA GCAGGGCGA            TCTGCTGCTGCGCGA  63 258
TspCOW1_03120 NONE
        rnhA  354400 ..  354415 +    -4  -3.94438   GGACGCAAAGGCGCA              GAGGTT CTGA AACTTC               TATTTTCTTCGCGTC  57 67
        dnaQ  355298 ..  355311 +  -9.5  -3.51924   GCGACGGGCCGATAC               CCGGC GGGA GCCGG                TTGTGTCGGTCGAGA  69 68
        wbpO  356666 ..  356715 +  -5.7  -2.89191   GCAGAGTCGCACAGA CGCAGAGGATGCAAGGC-TTTTTG TAG TAATGATGCTTTGCGTCCCCCGCG TCTCTGCGACTCTGC  48 52
TspCOW1_03160 NONE
TspCOW1_03170  358352 ..  358370 + -10.2  -3.29511   CCAGACTATAAGGAA             GCCGCCTC CGG GAAGCGGC             TTGTACCGAGGTGAC  68 93
TspCOW1_03180  359832 ..  359860 +  -4.4  -3.87323   GGGGCCCACTGAAGC       CCCGG-CGCTGTC AATC GGCCGCGGCCCGG        TTGTGTTTCCTCATC  59 29
TspCOW1_03190 NONE
TspCOW1_03200 NONE
TspCOW1_03210 NONE
TspCOW1_03220  366363 ..  366374 +  -7.2   -3.6682   CTTGCCCTGGCGCTT                GCCG CCTG CGGC                 TTTGACTCAATGACC  63 124
TspCOW1_03230  369002 ..  369043 +  -5.6  -3.34398   CGGCGATTGCGGCCA GCGCCGGACGCAGCCGCG CCTGCT CGGTGCTGCGTGCCGCAC  TCTTTACCGCCAGCA  51 151
TspCOW1_03270  374373 ..  374414 + -26.1  -4.18058   CAGCGCGGCCGGTTG ACAGATTCCCGGTGTCAGC CTTG GCTGACACCGGGAATCTGA  TTTTCCCCTATACTT 100 25
TspCOW1_03280 NONE
TspCOW1_03290 NONE
TspCOW1_03300 NONE
TspCOW1_03310 NONE
TspCOW1_03320 NONE
TspCOW1_03330  381559 ..  381573 +  -2.7  -3.77464   GGCACGACCGACGGG               AGGCC GCCAG GGCCG               TTTCATGAGTACTGT  51 3
TspCOW1_03340 NONE
TspCOW1_03350 NONE
TspCOW1_03360 NONE
TspCOW1_03370 NONE
TspCOW1_03380  387489 ..  387501 +  -4.7  -3.10344   GGGTCAGCAACATGT                GCGGC ATA GCCGG                TATATTCGATACCCG  47 76
TspCOW1_03390 NONE
TspCOW1_03400 NONE
TspCOW1_03410 NONE
TspCOW1_03420  392643 ..  392679 +  -2.1  -2.62616   ACTGCTGCCGGCTGC   GCCCGG-GGAGGCGGC ATGAGC GGCGTCTACACCCGGC    TGGTCTCCGGCCTGC  38 7
TspCOW1_03430 NONE
TspCOW1_03440  395659 ..  395693 +  -5.7  -2.65815   GCGTGAGAGCATCTC    GCGGTAGGCGGTGC-CG GCC CGTGCATCGTC-GCTGC    TGATGTGGGTATGCA  44 333
TspCOW1_03470 NONE
TspCOW1_03480  400368 ..  400385 + -11.3  -2.52543   ACTCGAGGCTCGTCA             TTCCGGC GCAG GCCGGAA              TCCATTGACCACAGT  65 113
TspCOW1_03560  406939 ..  406956 + -14.1  -2.84732   GATCCTGAATCCGCG             GCGGCCC GTCC GGGCCGC              TGTCATCCCTTTCCG  80 39
TspCOW1_03610  416158 ..  416181 +  -7.4  -3.25823   ATATCCGGGATGACT          GCCGC-TGTCC TGC GGACACGGGGC          TTCGTGTCGGACCAC  56 134
TspCOW1_03620 NONE
TspCOW1_03630 NONE
TspCOW1_03640  418157 ..  418193 +  -2.9  -2.74012   GGTTCGACCGCCTGA   GCGGGGGC-G-CCCATG CCTGA CACCGGCCTGCCCCTGC   TGGTTCGGGTGCTGC  41 6
TspCOW1_03650  419304 ..  419331 +  -9.8  -2.62396   GTGCGGTGTGTAGGA        TGGGTGAAGGCG CGTG CGCCGTAACCCA         TCGTCTCCAGCGGTG  60 84
TspCOW1_03670 NONE
TspCOW1_03680  421945 ..  421955 +  -8.2    -4.386   CTCCGGGCATTCAAC                 GCGC TGC GCGC                 TTTTGTCCCGCCTTC  77 220
TspCOW1_03730  425176 ..  425186 +  -2.4  -3.28119   TCTGCTATATCCTGT                 CCGC AGG GCGC                 TTGATATGCGTCAAT  44 56
TspCOW1_03740 NONE
TspCOW1_03750 NONE
       mbhS2  427368 ..  427382 +  -2.8  -2.62184   CCCCGCGCAGGCGGA               GATCCA GTG TGTATC               TGCTCTGCCGGACAC  40 122
TspCOW1_03770 NONE
        hdrD  429538 ..  429575 + -14.1  -3.16564   GCACAAACCGGAATC   TACCCCGTCATCCCGGC CTGC GCCGGAATGACGGGAAA    TTCGTCAAGTAGCCA  83 96
TspCOW1_03790  431442 ..  431475 +    -8  -2.70932   GTTAAAGTAAGGTGA     CGGCCGGGGGCGGGC GAATG GCCCATA-CCGGCCG     TCATTGCGAGGAACG  54 26
TspCOW1_03800 NONE
TspCOW1_03810 NONE
      hydG-2  433878 ..  433928 + -19.9  -3.61922   GGAAGACACGGAATG TCTGGGATTGCCATTGCCGTGGCGC TGC GCGCC-CGGCAATGGCGA-CTCGGG TTTCACATGCATATT 100 72
TspCOW1_03830 NONE
        hydA NONE
TspCOW1_03850  437395 ..  437411 +  -7.9  -2.82516   TCCAGATCCACCTCG              GTCGAGG TGT CCACGAC              TATGCTGATCCGGCG  52 355
TspCOW1_03880  439555 ..  439599 + -14.4   -3.0263   AGCCAACGTTCAGGC CTGTTCGTTGGGTTACGGCGC TGTC GCGCC-TAACCCAACCTACGG TGTTCCAGACCTCCT  83 64
TspCOW1_03980  448947 ..  448965 +  -8.8  -2.73994   CGTGATCCCGACCGA             CCTACCGG CAC CCGGTACG             TACTGTTGACCGGCT  58 36
TspCOW1_03990 NONE
TspCOW1_04000  451299 ..  451314 + -11.8  -4.81551   GACCCGGTGAAAAAA              GGCGGC CGCG GCCGCC               TTTTTCATGTCCCTC 100 65
        gltX  455808 ..  455821 +  -9.5  -3.31726   GATCCAGATCATGAC               GGCCG GCGC CGGCC                TGTTCTATAAAGGGA  66 39
TspCOW1_04040  456628 ..  456638 +    -4   -4.7458   AAAGCTTATGGCCCA                 TATC TCG GATA                 TTTATTTATTCTGAT  75 182
TspCOW1_04050  457991 ..  458032 +  -7.1  -3.12261   ATCGTCGCGTCCGGG GCATGATGGGTTACGGCGC CGGG GCGCCTGCACCCATCCTAC  TGTCTGGTTTGTTTG  54 121
TspCOW1_04100  465470 ..  465485 +  -3.2  -3.53012   TAAAGTAAGTGCCAT              TCGGTA CAGT TGCCGG               TTTGCGAGCGCCCCA  49 213
TspCOW1_t00040 NONE
TspCOW1_04110 NONE
TspCOW1_t00050  465941 ..  465964 +   -16  -4.38927   GCCATTACGATCAAA          GGCCCGGGGT TCTG ATCCCGGGCC           TTTCTTGTATAGCGA 100 37
TspCOW1_04140  467079 ..  467099 +  -4.6  -2.72166   GGCAGCGGCTGACCA            CCGCGACG CGCAT CATCGTGG            ATATTTCGTTGAGCC  44 83
      higB-2 NONE
TspCOW1_04160  468069 ..  468082 +  -2.3  -3.03473   GGACTACGGCAATTG               GCGTC ATAT GACGG                GTTGTTTGATGTATA  41 61
TspCOW1_04170 NONE
TspCOW1_04180  468715 ..  468764 +  -7.3  -3.65313   AGATGAGGCTGCAGT TTGCTGTTTTC-ACGACTGTTACG CTG TGTAACAGGTGTTGCAAACTGCAA TTTCCGCTATCATTC  63 188
TspCOW1_04200 NONE
TspCOW1_04210  471812 ..  471845 +  -3.8  -2.52543   TCCACCCGCGCCTCG     GCCTCCAGGCC-GTC ATCGA GATAGGCCTGCAGGG     TGCGTTGGGCGGCCT  40 227
TspCOW1_04250  474359 ..  474376 +  -4.7  -5.48825   GATCCGGTTTTGTAG             CGGCTGG CCCG CCGCCCG              TTTTTTTCCGTCATC  90 26
TspCOW1_04260  475284 ..  475294 +  -8.2  -3.41878   GGCGGGGATCCAGTT                 GCCG TGG CGGC                 TTGTGGATTCCCGCC  61 99
TspCOW1_04270 NONE
TspCOW1_04280  476460 ..  476476 +  -9.3  -3.06162   ATTTCCTGTCAGTTG              GCCGGGC CGG GCCGGGC              TGTTACCATGCCCTG  64 42
TspCOW1_04290  478420 ..  478430 +  -5.4  -3.62522   CCGCCATGTACTCGC                 TCAG CCG CTGA                 TTGTTCAGCCGGTTG  57 171
TspCOW1_04340 NONE
TspCOW1_04350  482017 ..  482049 +  -2.5  -3.14468   GCTGCGTCAGGGCCA      GGGCGAGATCGAGGC GCT GGCATGATCTCGCAG      TTGAGTCTGATCCAG  41 1
TspCOW1_04360  482762 ..  482793 +  -6.4  -2.57931   GGCACTTGCTGCTAC      CTCGTCATCCCCGC GAAG GCGGGGATCCAGGG       ATTGTCCGCCCTGCC  48 48
        trpS NONE
TspCOW1_04380  485313 ..  485365 +  -9.2  -2.79796   GGAAGGAGATAATCA GCCC-AGGTAGGTTGGGTTA-GGTGC GCA GCACCGTGACCCGACATGTCGCGGGC TGTGGTGACGTCAAC  61 138
TspCOW1_04390 NONE
        rluB NONE
       nth_1  488294 ..  488309 +  -6.8  -3.14564   GGCGCAGTCGAGTGC              GGCCTGC ACC GC-GGCC              TTGATGGCGCAGTCG  52 374
TspCOW1_04430  490799 ..  490841 +  -6.1  -3.02144   TCCTCGCCGGGATAG GCCTGGGTGC-GCAGCCGGG TGCG CACGGCGCCCGGATCCAGGC TGTTGACGCGGATGC  49 419
TspCOW1_04540 NONE
        mtnA  503228 ..  503254 + -12.3  -4.83169   GTCAAACCCCGTCTG         AGCGCCTCAGA TTCGT TCTGAGGCGCG         TTTTTCTGGGACGCT 100 323
        gyrA NONE
        serC  507181 ..  507227 +  -6.7  -4.28375   GAATTGAAATGATTA TGGT-TTTTCATTGCCG-GGCGC GCA GCGCCACGGCAATGACAATAAAA TTTTCCGTGTCTTCC  72 74
TspCOW1_04580  508550 ..  508592 +  -2.7  -2.57501   ATTGAGGCTACCGCG TTA-CGAGATTGCCGCGGCGC TAC GCGCCTCG-CAATGACGATGA ATATATTTGATAGCC  38 124
        pheA  510022 ..  510053 + -12.4  -2.53263   CAGGGGCCTCACCGG      TGTCGGATTACGCCC TGC GGGC-TAATCCGACC      TACGTTGCAGATCGA  68 273
       hisC2  511327 ..  511348 +  -2.3  -3.07816   GGGGTGACGGAAAAA           TGCA-TTGCA GCG TGCTATTGCA           TTCGCTGCATACGAG  41 145
TspCOW1_04610  512394 ..  512423 + -13.7  -2.71791   AAGGCAGTAACGTAG       GTCGGGTTA-GTCC GCA GGGCGTAACCCGAC       GTTTGCCGCGACGCT  76 181
TspCOW1_04620 NONE
         cmk  514645 ..  514667 + -14.2  -4.32857   TTTGTACGAATCGGC           GCCCGGATAG CCC TTATCCGGGC           TTTGTCTTTGCAACC 100 187
        rpsA NONE
        ihfB NONE
TspCOW1_04660 NONE
        lapB NONE
        pyrF  519149 ..  519165 +  -2.1  -2.70932   CCATCAATCGCGAGT              TGGCGCC GTA GGTTCCG              TCATTGCGAGCGCAG  39 15
TspCOW1_04690  519637 ..  519664 +    -4  -2.72839   CCGTCTCGCAACCCG        TGGCGGACGCGGC CCG GCCCTGAC-GCCA        TAATTACCCGTCATT  43 3
        xanB  521362 ..  521379 +  -2.7  -2.81476   TGTCTACGATCGAGT             TGGACAA TAGG TTGTACA              GTATTTTCGATACGT  39 16
TspCOW1_04710 NONE
        wcaG  523909 ..  523925 +  -2.9  -4.35742   ATGGCGATAGATGAT              TATGCCT GTG AGGCCTG              TTTTCATCGTTGGAT  64 31
TspCOW1_04730  524866 ..  524882 +  -2.2  -2.98219   TCCCGCATTTCGATA              GGCC AGCAGCTTG GGCC              GTTTCTGATAGCATT  40 43
TspCOW1_04740 NONE
TspCOW1_04750  527772 ..  527804 +  -3.3  -4.78107   TACCGCTGTAGAAAT     GGCGCCTCAGTGTC TGGAGC GTC-TTGTGGCGCC      TTTTTCATCGTCATC  73 449
TspCOW1_04760 NONE
        wlbF NONE
        bplG NONE
TspCOW1_04790 NONE
TspCOW1_04800 NONE
TspCOW1_04810  533922 ..  533936 +  -7.1  -3.91332   CTTGGGGTATGTGGC               CAGCC GTCTG GGCTG               TTATTATATACTCCT  66 479
TspCOW1_04820  535513 ..  535524 +  -2.2  -4.39166   CAGCCTGGCTATGGT                GTTG GGGT CGAC                 TTTTCATCTGTGGCA  62 289
TspCOW1_04840  537025 ..  537053 +  -8.1  -4.27465   TTATGGTTGCCGCTG        GTGATGGCGCT TCAAGTC AGCGCCTTCGC        TTATTTTGGCTTGTA  77 323
TspCOW1_04860  538825 ..  538851 +  -9.5  -2.56413   ATAGTGATTACTGGA        TCCCCG-CATTC GCGG GGATGACGGGGA         ATCTGTTTCGCCTTT  60 98
TspCOW1_04870  540066 ..  540087 + -15.9  -3.72363   GCCGTAAACAAAAAA           GCCCGCATC GACC GATGCGGGC            TTTCGCGTTTGGCTC 100 196
        uvrB  544236 ..  544283 + -19.2  -4.32482   TGCCTACTGGACCGC AAGCCGCAGGTCGGG-TAAGCCC GAA GGGCGTAACCCGACGTGCGGCTA TTTTAACTTGTCCGT 100 432
TspCOW1_t00070  547320 ..  547344 + -12.2  -5.04325   AATCCTGATCGAACA          GGGGACAGAT GCCCG GTCTGTCCCC          TTTTTATACTTTCAG 100 41
        thrS NONE
        infC  549868 ..  549883 +    -9  -4.71776   TCCCCGAAAAAGTGA              GCGATC GCGC GATCGC               TTTTGTTCAATGTTC  93 26
        rpmI NONE
        rplT  550568 ..  550590 + -10.6  -5.52023   GCGGCAAGTCAAAAA           GGGAAGGC CGGTAGT GCCTTCCC           TTTTTTCTTCGTGGT 100 78
        pheS NONE
        pheT NONE
        ihfA NONE
TspCOW1_05000  555175 ..  555189 +  -4.3  -4.41895   TGGCTGTCAGGTCAA               GTTCA GGCGA TGAAC               TTTTCCTTCCAGATT  68 102
TspCOW1_t00080  556900 ..  556935 + -10.4  -3.63627   CCCGGCGGGCGTTCA    GCCTGCTGCGTTCGTCC ACC GGACGCACG-GTCAGGC    TTTACCCTCTCGCCC  75 360
TspCOW1_05020  558153 ..  558174 +  -4.4  -3.90318   CCTACGCTCGGCCAT           TCCGGC-CT GACAG GGCGCCGGA           TTTCTGGGATAATGC  59 238
        aroG  559554 ..  559564 +  -4.6  -3.28866   AAGGGCGCTGCGAGT                 CCCT GAG GGGG                 TATCTTTGACTATGC  49 256
        prfB  560707 ..  560742 +  -2.4  -3.35679   CAGAACTTCCCGTCA    TTC-CCGCGAAGGCGGG AAT CCAGTGATCGCGGCGAG    TTCTGGATCCCGGCC  46 138
        lysS  562464 ..  562495 +  -3.6  -4.57569   ACTTGACAGCCTTTG      CCCGATCTGGCC TTATAGGT GGCAGGATGGGG       TTTTTAAAGGAATAA  70 150
TspCOW1_05060  564556 ..  564578 +  -7.6  -2.71731   CATGAGCGGGTAGGA           TGGGTGGAGC GCA GCGCAACCCA           TCGTTGCACGGTGCG  54 66
TspCOW1_05080 NONE
TspCOW1_05090 NONE
        sdhA  568504 ..  568520 +  -9.3  -3.13371   GAGCGTGGATACTTT              CCCGCCC AAG GAGCGGG              TGTATTGATGGGATA  64 1
        sdhB  569401 ..  569429 +  -8.7  -3.28924   CGTCCTCCCGGGCGA        TGGGTTACGGCGC ACG GCGCCTCCACCCA        TTCTACGCAACGGTG  63 92
TspCOW1_05120  569811 ..  569854 + -16.8   -3.4678   TGGTAGTCCTGATCA TGTTTTCCCGTCATTCCGGC CTGC GCCGGAATGACGGATAATCA TTCTGATATCCACCT  90 123
TspCOW1_05130 NONE
TspCOW1_05140 NONE
TspCOW1_05150  572391 ..  572419 +  -7.3  -3.17054   GGTGCTGATCCGGTA        GGATGGGTGGAGC GCA GCGCAACCCATCG        TTGCATGATTTGGTG  54 25
TspCOW1_05160 NONE
TspCOW1_05170  574449 ..  574483 + -12.8  -2.78384   CGGAACTATTGCGTA     GGATGGGTGAAGGCGC TAA GCGCCGTAACCCATCA     TGTCCTGCCGCACCG  73 62
        nagZ  575688 ..  575717 +  -7.1  -2.62184   TTGTTCCGAGATCGC       CGCAGCGCATTGCG CCA CGCAATG-GCGGGG       TCGTCTGAAACGCCG  50 100
TspCOW1_05190 NONE
TspCOW1_05200  577870 ..  577886 +  -2.1  -2.77182   GTAGGATGGGTGAAG              CGAAGCG CAA CCCATCG              TCGTTCGATATCCGA  39 49
TspCOW1_05210 NONE
TspCOW1_05220 NONE
TspCOW1_05230 NONE
        yhcX  581924 ..  581937 +  -3.8  -2.78384   TTTGTTCTTTGTCTT               CGCA AGCGGC TGCG                TGTCCTCGGAGGAAG  43 377
TspCOW1_05250  582536 ..  582590 + -18.9  -3.33399   TCCATTATTAGTGGA TTAAAGGGGTCGGTGACAAATGAGAA TGAT TGCGC-TTTGTCACCGACCCCTTTAG TTCCCTTTAGTTCCA 100 22
TspCOW1_05260 NONE
TspCOW1_05270  583627 ..  583650 +  -5.9  -3.01791   AACAAACGGCTCAAG          CACGACGCGC ATACA GCGCG-CGCG          TCTTAGCCGAGCCGT  48 47
TspCOW1_05280  584274 ..  584297 +  -5.3  -3.61398   GAGCAGGGCATTGGG          TGCAGCC TGAACCATGT GGCTGCA           TTATTACAGGAGCGC  55 253
TspCOW1_05290 NONE
TspCOW1_05300  585480 ..  585494 +  -3.5  -4.27316   AGTACCCCACAAAGT               GTCTC GTAGA GAGGC               TTTTCGATTCAGCAC  64 214
TspCOW1_05310 NONE
TspCOW1_05320  587076 ..  587090 +  -7.8  -3.34962   CTGTAGGGAAGGCGT               CCGGAG TTT CTTCGG               TTCTGGAATCTGGGG  61 283
TspCOW1_05330  588126 ..  588143 +  -6.2  -3.31461   TTCGCTTCTGGTGTG             CGCCGT GCAAAG GCGGCG              TTATCCCCGTGGGTG  54 129
TspCOW1_05340 NONE
TspCOW1_05350  590143 ..  590157 + -11.4  -4.75289   CTGTAGGGGAGGCGT               CCGGAG CTT CTCCGG               TTTTGTCTTCTGATG  95 217
TspCOW1_05410  598463 ..  598476 +  -5.2  -3.06815   TGGATCCCGGCCTTC               GCCG GGATGA CGGC                TCTGTTGCGGAGGAT  49 149
TspCOW1_05490  607193 ..  607210 +  -8.5  -3.06183   ATGCCGTTGACCATA             TATACGG AATA CCGTATA              TTCGGTCGCCATGCA  60 310
TspCOW1_05500 NONE
TspCOW1_05510  608227 ..  608260 + -14.7  -2.59431   CGACGGCCCGCGGCA     TGTTGGGTTACGGCGC TGT GCGCC-TAACCCAACC     TACGTTATGCCGGAC  78 133
TspCOW1_05520 NONE
TspCOW1_05530  610240 ..  610252 + -10.5  -3.32844   TCACCCCTTCGGGGC                CGCCC TGC GGGCG                TTCTGCGCTCGCAAG  69 192
TspCOW1_05540 NONE
TspCOW1_05550  612526 ..  612540 +  -8.5   -2.6518   GCGAATCTTCAGAAA               GGCCG CCCGC CGGCC               GTTATGACTGTTGAA  57 43
TspCOW1_05560  613042 ..  613057 +    -6  -3.58869   ACCGCCGTCCCTGCA              CCGGCC ATCC GGCCAG               TTCTGTCCATTTCTG  58 40
TspCOW1_05570 NONE
TspCOW1_05580 NONE
TspCOW1_05590  617240 ..  617251 +  -7.2  -3.06796   GATCTCGTGGTAACT                GGCG CTCT CGCC                 TTGGCTGAAGTAGAC  51 194
TspCOW1_05680 NONE
TspCOW1_05690  626696 ..  626707 +  -7.2  -4.30978   TTGCCGTCACGGGCC                CGGC GCAC GCCG                 TTTTCATCCGTTACC  75 149
        rpsB  631929 ..  631962 +  -5.1  -3.53811   CTGAACAATCACCCT     TTCCGTCATCCCCGC GAAA GCGGGGATCCAGGGG      TTTCAGAGACATGGA  53 61
         tsf  633039 ..  633059 + -18.3  -3.07935   CGGAGCATGCCGAGA            TGGGGCCGC ACT GCGGCCCCA            TTGCATGCGTGGCAT 100 68
        pyrH NONE
         frr NONE
        uppS NONE
      cdsA-1 NONE
         dxr  637274 ..  637312 +  -6.7  -3.21416   CCGCGGACGCCGGCA  GGCGGT-CTCGTGAACGG CATC CTGTTCACCATCGCCGCC   TTCGTCGTCGCCATC  54 13
TspCOW1_05810 NONE
       opr86 NONE
TspCOW1_05830 NONE
        lpxD NONE
        fabZ NONE
        lpxA  643941 ..  643954 +  -6.7  -2.80816   CCCGCGGCATCGTGC               GCTGA AGAT TCAGC                TGTCATGGATGAAAC  49 21
        lpxB NONE
        rnhB  645778 ..  645809 +  -2.8  -3.54129   AGAGCCGGGGAAAAG      CGGTCTCACAGGCCG GAT CGG-CTGCAGGCCCG      TTTCCGGCAACTGTC  49 44
TspCOW1_05890  647486 ..  647500 +  -4.2  -2.70932   CAGCACATACCAGGA               TCGATC CAT GAACGA               TACTTCCCGACCCGG  43 15
TspCOW1_05900 NONE
TspCOW1_05910 NONE
TspCOW1_05920  650724 ..  650738 +  -6.4  -4.29227   GCAATGACGGATTAA               TCAGGG AAC CTCTGA               TTTATTCGTCATTGC  72 49
        dnaE  654625 ..  654638 +  -3.7  -4.19624   AAACTCTGCGTTCTC               TGCGC CTTC GCGCC                TTTGTGTTGAACATC  62 163
        accA NONE
        tilS  657035 ..  657065 + -16.3  -2.74501   GCGCCCGACCCGTAG      GTCGGGTTA-GCCC GAGA GGGCGTAACCCGAC       ATTTGCCGGCTTCGT  86 58
        pyrG NONE
        kdsA  659797 ..  659827 + -16.3   -2.7782   GGTGCATCCTTGTAG      GTCGGGTTA-GCCC GACA GGGCGTAACCCGAC       GTTATTGCCGCGTTC  86 40
         eno NONE
TspCOW1_05990  661684 ..  661694 +  -2.4  -2.68823   TCCGACCTACGGGAC                 CTGG ACA CCTG                 CTTATGTCACACAGC  38 116
        ispD NONE
        ispF  662869 ..  662881 +  -5.5  -3.82433   CGTGCTGATTGAAAA                CCTGT AGG ACGGG                TTTGGTGATCGTTGT  61 19
        hsdM NONE
TspCOW1_06030  666354 ..  666367 +  -6.7  -3.32844   AACAATTGGCAATTA               CGACA AGGA TGTCG                TTATGAACTACCGAC  56 164
TspCOW1_06040 NONE
        hsdR  669519 ..  669537 +  -3.8  -3.12327   TCGGGAAGTTTTTGT             CGGATTCC AGC GTAATCTG             TATTGAGTGTCGGGA  45 1
TspCOW1_06060  670543 ..  670558 +  -7.6  -3.11088   TGCGTGCGCAGAAAA              TCATGG ATGG CCATGA               TCTGTTGCGTGCCTT  54 214
TspCOW1_06090  672631 ..  672675 +    -7  -3.65046   CGGTCGTGCAGATAA CGGCGCAGCTGGGCA-GCGTT GTGA AAGGCATGACCCGCCGCGTCG TTGTTGAAGTAGGCG  61 89
        truD  674530 ..  674564 + -11.4  -2.70665   TGCCGGGTAGCGTGC     CGATGGGTTACGACGC TGC GCGTCTTCACCCATCC     TACCTTGTTATATGT  66 91
        surE NONE
       pcm_2 NONE
TspCOW1_06150  677219 ..  677239 +  -5.3  -3.19157   GTTGCTGAGGGGCTG            ATGCGGCGG GTG CTGTCGCAG            TTCGTCCGGTTGCTG  51 25
TspCOW1_06160 NONE
        rpoS  679102 ..  679142 +    -4  -2.74144   GGTCGGGTTAGCGCA  GCGTAACCCTACAATA CAGCGCGAA TCCTGTCGGGTTACGC  CTTTCAGGCTAACCC  43 114
        yfdZ  681143 ..  681172 + -14.3  -5.20633   TGCCTGACAGTTTTC       CCGTCATTCCGGC GCAT GCCGGGATGACGA        TTTTTGTCTATTTTT 100 111
         hom  682665 ..  682706 +  -4.3  -3.43774   ACCCGACGCAGTCCG CCGGGCATGTCGGGTTACGC TGC GCTT-ACCCGACCTACGTGG TTCAGTTTTATATAC  49 110
        thrC NONE
TspCOW1_06220 NONE
        recJ NONE
TspCOW1_06240  688672 ..  688699 +  -3.3  -2.79183   CCGATTTTCTGAGCG        GCTTCCCGGTA TTTTTC TGCCGGGACGG         TATACTGGGGCTCGA  41 42
TspCOW1_06250 NONE
TspCOW1_06260  690133 ..  690150 +  -4.1  -2.92475   CCTGCGCGGGGATGA             CGGATAT AGTG AAATCCG              GTTTATCAGGATGCA  44 136
TspCOW1_06270  692375 ..  692398 +  -8.8  -3.15861   CAGGCGCGAGGACTC          GCGGATCAGC TGCT GCTGGTCGGC           TTCCTCCAGCTGATG  56 334
TspCOW1_06290  693636 ..  693672 +    -5    -3.965   TGGCCTCTTCCTGGT   CGACGTCCTCGAGCCGG TCCT CCAGCTCATGGATG-CG    TTGTTCGTTTTCGGG  61 414
TspCOW1_06420 NONE
TspCOW1_06430 NONE
TspCOW1_06460  710415 ..  710434 +  -7.8  -3.60627   GACAGCAGCCTGAAG            TCAGGGCG CCCG CACCCTGA             TTTCCGCTCAGCTGA  62 63
TspCOW1_06480  712593 ..  712603 +  -2.4  -4.19483   ATTGTAGCCTGATTC                 GCCG TCG CGGG                 TTTCTGTGTATCTGA  59 128
TspCOW1_06490  713922 ..  713938 +  -9.3  -3.86822   CAGAGAAGGGGTGAT              CGGAGGC GCC GCCGCCG              TTTCTGCCGGGCTTG  75 27
TspCOW1_06500  715035 ..  715065 +  -6.2  -2.97021   TCAGCCCTCAGCTGT       CTGCTTTCAGTT TGAATTC AGCTGAAGGCGG       TATCCTGTTTCCAGA  51 60
TspCOW1_06510  715871 ..  715898 +  -4.8  -3.57263   GGTTCCGTGACAGCG        CCCTGTGT-CAGG GCG CCTGCACCCATGG        TTTCCAGCTCAACCT  53 55
        frmA NONE
TspCOW1_06550  720386 ..  720397 +  -5.8  -3.12351   GTCTCGGGTCCTGAG                GGTG AACT CACC                 TTCGGTCTGACCGAG  49 498
TspCOW1_06600  727511 ..  727524 +  -4.5  -3.01712   CCAGCAGCTGCCAGC               G-CCGG CCG CCGGAC               TGTTCCCACAGCACG  45 102
TspCOW1_06640  730967 ..  730985 + -13.1  -5.42975   AGTGCAGGACAACGA             CCCCCGC CCAGT GCGGGGG             TTTTTGTTTGTATGC 100 68
         icd  732736 ..  732750 +  -7.8  -3.81089   ACCTCGTTTACCGCT               GCGGTT CAC GACCGC               TTATTGCTGTGTGTG  68 255
        clpS NONE
        clpA  735664 ..  735688 + -19.3    -5.626   GCCGCACGAACATCA          CCGCCCGACCG TCC CGGTTGGGCGG          TTTTTTTATGGGCTG 100 50
         ald  741339 ..  741361 +    -9  -2.73364   AGCGGTCGAGAGTGC           CGGCCACATC CCT GAAGAGGCCG           TCATTCCCGTACCGG  58 81
        ftsK NONE
        lolA NONE
TspCOW1_06770 NONE
TspCOW1_06780  746233 ..  746244 +  -4.4  -2.71731   CCTGGGATCCTGCAT                CGTT CAAT AACG                 TCATTCCGGCATACG  44 97
        crcB NONE
TspCOW1_06800  747150 ..  747182 + -12.8  -2.54193   AGTTGCGATGGACGG     TGTCGGGTTACGCCC TGGC GGGC-TAACCCGACC      TACGTTGAGATCATA  71 85
        serS  748585 ..  748598 +  -8.1  -3.73783   CCAGCAGTTCAGCGC               TGCCG CGAT CGGCA                TTCTTCCATTCACTG  63 119
TspCOW1_06860  752641 ..  752660 + -13.6  -5.60993   AGGGGTGTAGCTTTA            CCCTCCCT GTAA AGGGAGGG             TTTTTTTATGGCCAC 100 114
        pepN NONE
TspCOW1_06880  756550 ..  756571 + -11.5  -2.71791   ATAGTTGCGCCCGGT           CCGGGCTGC GCGC GCAACCCGG            CTTTGCCCGCCGCGT  66 117
        cysG NONE
TspCOW1_06900  758462 ..  758500 + -18.2  -2.65298   CTGATCCTGCTTCAG  GGCACGTCCGGTCCCGT GGTCAG ACGGGACCGGCCG-GCC   GTTATCATCACTCCG  95 37
TspCOW1_06910  759828 ..  759862 +    -2  -4.07568   GCGAGGCCTGCTGGT    GTGCGGCCTGCGCGC GTGGCG GCAC-CAGGCTGTCC     TTTTCCGGCCAGGGA  58 321
TspCOW1_07110 NONE
TspCOW1_07120  780546 ..  780579 +  -8.3  -3.09581   GATAATGGCTTAAAT     CCGGT-TAGCAGCA TGAATAC TGCTGTTATACCGG     TATATTGGAAATTTC  57 36
TspCOW1_07130  781319 ..  781340 + -18.7  -2.80056   CAACTGACGCCTGTA           CGCCGCGGC AACG GCCGCGGCG            CTTTCAATCAGTACT 100 34
      dsrC-2  781830 ..  781842 +  -4.7  -2.78384   GGATATAGTTGCGGG                CCGAC CGT GACGG                TATAGTCCCGCCCAG  44 65
TspCOW1_07150  782129 ..  782145 + -10.1  -5.71712   GCACTGCAGAAAAAA              GCCTCAC CTG GTGGGGC              TTTTTTTATGTCCGG 100 47
TspCOW1_07170 NONE
TspCOW1_07180  783611 ..  783623 +  -2.6  -2.90496   CCGCCTCGGTCCCGC                CTGC CTTTT GCGG                TCATTTCGCGGCCGG  40 61
TspCOW1_07190  785133 ..  785143 +  -8.2  -3.13403   TTGCTGCAGCAGCAC                 CGGC GTG GCCG                 TGTTCATCCAGGCCA  56 485
TspCOW1_07240  788813 ..  788823 +  -4.6  -2.62184   CAGGCTGTCACCGGG                 CGCG GCC TGCG                 TGGTCTGGGGAGACA  42 501
TspCOW1_07270  791394 ..  791404 +  -4.6  -3.30956   CTGCGTCATAGTATG                 CCTG ATG CGGG                 TTCATGCTTGCTTCT  49 525
TspCOW1_07290 NONE
TspCOW1_07300 NONE
TspCOW1_07310  794096 ..  794106 +  -4.6  -3.54919   TCCTGACTGCTGCCG                 CGCG GGC CGTG                 TTTGAGCCAGTGATT  52 113
TspCOW1_t00090  795687 ..  795710 +   -16  -3.63744   CTGCCGCCAGGGCCA          CAGCGCCGCC CCCG GGCGGCGTTG           TCTTTTGCGGGCACA 100 143
TspCOW1_07460  806112 ..  806126 +  -5.7  -3.35679   GCTTCCCAAGGCGTA               TCAGC CAGGA GCTGA               TTCTCCGTCAGACGG  53 193
TspCOW1_07470 NONE
TspCOW1_07480  809035 ..  809048 +  -4.5  -3.61398   CTTCTGACCCCAAAC               GGGCT GAAC AGTCC                TTATTGCAGGGGCGC  53 34
        gacA  814181 ..  814195 +  -3.5  -4.40804   GAGCCGGCACGCGGT               CTGAC GTCCG GTCGG               TTTTCTGGGATAATG  64 39
TspCOW1_07550 NONE
        uvrC  816842 ..  816854 +  -4.9  -2.74604   TGGTTGAATAAATGA                CAATA TTA TATTG                ATATTTATGAATTAT  44 138
        pgsA  817428 ..  817438 +  -3.2  -2.80195   CCGCTGCTGGTAAAA                 TCCG ATA TGGA                 TACTTAGTCCTGAAT  41 8
TspCOW1_t00100  817604 ..  817630 + -10.8  -5.22039   ATTCCATCGGGGAAA         CCCCGGTCGT GGTCCAG GCGGCCGGGG         TTTTTTCACTTTCAG 100 42
TspCOW1_t00110 NONE
TspCOW1_t00120 NONE
TspCOW1_07580  818467 ..  818483 + -10.8  -5.40072   GATCCGATGAACGAA              CCCGCC GGTGA GGCGGG              TTTTTTTCGCAAAGG 100 53
TspCOW1_07600 NONE
TspCOW1_07610 NONE
TspCOW1_07620  823230 ..  823255 +  -4.6  -3.10017   GCAACGGACGCCCGA         CGGCGGTCTG TCGGGC CAGACCGGGG          TATCTGTTCCGACTT  47 524
TspCOW1_07660  825913 ..  825934 + -11.5  -3.14132   TGCCCACTGCTGGAT           GGGCCGGGT CTTG AGCCGGCCC            TTGATGACCACGGCC  66 325
        sucA NONE
        sucB NONE
        lpdG  832741 ..  832753 +  -4.8  -3.01712   ACCGCGGCCAGGACG                CCCT TGAAC AGGG                TGTTGACGACCGCAG  45 226
TspCOW1_07730  835037 ..  835047 +  -2.4  -2.92951   CGGAATTCATAAAAA                 CCCC GCA GGGA                 ATTTATAAGCCTCTG  40 188
         sat  836334 ..  836349 + -11.8  -5.76237   GCCTGAAAGACGAAA              GCCGCC TCCG GGCGGC               TTTTTTATTTATGTG 100 51
        adh2 NONE
TspCOW1_07830  843493 ..  843508 +  -6.8  -2.69799   AGATATCAATCCCAT              CTCAGG ATGG CCTGGG               TGATATATGCACTGA  50 58
TspCOW1_07840  843751 ..  843767 +  -2.2  -3.63464   GACGAGGGCGCGCGC              CCGG ATTGAGTGA CCGG              TATTATTATTTAACA  47 77
TspCOW1_07850  844311 ..  844335 +  -8.6  -3.85817   TGATTGACTGGCCTC          GTGGCCGT ACCTGTAAC ACGGCCAC          TTTGTCCACCGGGGT  72 89
TspCOW1_07860  845008 ..  845038 +  -8.8  -4.67038   CGGCCGTCAGGCCGG       GACCGTGGGGGCGC TGC GCGTCTCTTCGGGC       TTTTGGTTTTGCGAA  86 78
TspCOW1_07870  845827 ..  845851 +  -8.6  -3.85817   TGATTGACTGGCCTC          GTGGCCGT ACCTGTAAC ACGGCCAC          TTTGTCCACCGGGGT  72 89
TspCOW1_07880  846524 ..  846554 +  -8.8  -4.67038   CGGCCGTCAGGCCGG       GACCGTGGGGGCGC TGC GCGTCTCTTCGGGC       TTTTGGTTTTGCGAA  86 78
TspCOW1_07940  854708 ..  854744 + -15.9  -2.62263   GTAACGCCCTGATTA    TGCAGGTTGGGTTTCGC GTT GCTCAGCCCAACCTGCA    TAGTGTGACGGACAT  84 37
TspCOW1_07950 NONE
TspCOW1_07960 NONE
TspCOW1_07970 NONE
        yfcX NONE
TspCOW1_07990 NONE
TspCOW1_08000  864198 ..  864231 +  -5.3  -3.27704   GCCGGATTTCCACGT     CGATGCAGGTTGCGGT ACG GTCGTGA-CTGCGTCG     TTCCATTTCCGCCCT  51 488
TspCOW1_08220 NONE
TspCOW1_08230  884750 ..  884772 +  -4.7  -3.66874   AGCGCCTCGAGCATT           CGGCGGTGG AGAAG CCGTAGCCG           TTTCAGTAAGATTCC  56 157
        oadA NONE
       maf-1  887348 ..  887381 + -11.1  -2.58999   GCCTTGATAAAGATA     TCCGTCATTGCGAGCG AAG CG-TGGCAATGACGGG     GTTAATCTGTAACGC  66 34
TspCOW1_08260  887691 ..  887701 +  -8.2  -4.37886   CTCCGGGCGTTCAAC                 GCGC TGC GCGC                 TTTTGTCCGGCCTGC  77 109
TspCOW1_08300  894313 ..  894333 +  -2.5  -3.72893   CTTGCGCGCACGCTG            CGCGG ACAGGTCATAA CCGCG            TTTGCTGGCGGCCTC  51 522
TspCOW1_08320  895256 ..  895267 +  -5.8  -3.31792   AGCATCGCCACCAGA                TGCG AATG CGCA                 TTCTCCGGCTCGTCC  51 335
TspCOW1_08470  908399 ..  908431 + -11.9   -2.7263   AGGGAACTCTCGTAG      GATGGGTGAAGGCGC GGT GCGCCGCAACCCATC      GTTTCACCGCGTCAT  70 26
TspCOW1_08510 NONE
        aguA NONE
TspCOW1_08530  913924 ..  913940 +  -5.1  -4.11216   GTCACTTCGTTCCTC              GCAATGA CGG TCCTTGC              TTTTCCCCATCAGAC  64 212
        aroF NONE
TspCOW1_08560 NONE
TspCOW1_08570  917602 ..  917620 +   -16  -5.75538   CCGGAGTTCCTCACG             GAGCGGCC AGT GGCCGCTC             TTTTTATTTTTTGCG 100 52
TspCOW1_08620 NONE
TspCOW1_08630  924915 ..  924932 + -14.1    -5.626   CCCTTAATACAACAA             CCCGCGC ATCT GCGCGGG              TTTTTTTATGGGGTG 100 55
TspCOW1_08640  925783 ..  925810 +  -3.2  -3.48593   CGCCGCCCCGCACAT        GGC-GGGGTAGGC CCT GCCGTCCCGAGCC        TTCTGTCCGCAGATC  48 167
        glcD  938619 ..  938637 +  -5.8  -2.67747   ATCAGGGCCAGCTGC             CGCACCCG GAA CTGGAGCG             CTTCTGATGTGCGAC  46 0
        glcE NONE
TspCOW1_08770  940995 ..  941039 +  -6.9   -3.7732   GCCCAGAAGCCCAGG GCGCCGTCTCCCACGGCCAGC TTC GGTGGCACTTCGAGACCGCGC TTCTTCATCTCCAGC  64 473
TspCOW1_08790  942767 ..  942804 +  -2.8  -4.09374   TCTCACCGAAAGAGA   TCGTCGGATATACTTCG CCAGC CGTTGTATATCC-ATGA   TTATTCTTCTCTGTT  59 469
         mqo  952981 ..  953018 +  -6.2  -2.65264   GCCGCCGAACTGGAT  GCCCCGGGTGAGCCG-GC TTAG GCGCTGCT-GCGCGGGGC   TGCTCTGCCTGCTGC  48 5
TspCOW1_08880 NONE
TspCOW1_08890  953926 ..  953959 + -10.9  -2.70932   GTACAAGTAAGACGA     ACCGCCGCCCTGC-CG ACC TGCGCAGGGCGGCGCC     TCATTCCGGGAGCGA  66 31
        queF NONE
TspCOW1_08970 NONE
        cysZ  967056 ..  967073 +  -5.5  -3.04461   CCTCCTCCAGCAGCC             GCTGCGA GAAT TCGAAGC              TGTTCCCGGTCAATG  47 266
TspCOW1_09010  969833 ..  969855 +  -4.6  -2.55392   GTTCCGTCCGGACAG           GGACGGACCG GAG CGGCCCGGCG           TCAGTTCCCTCCCTT  43 78
        gluQ  971029 ..  971041 +  -9.1  -3.42366   GCTGCCATCTTCTGA                TCGGC GTT GCCGA                TTCTGAACTTTTCCA  63 250
       acsA2 NONE
TspCOW1_09050  974701 ..  974715 +  -2.8  -3.46888   GGGACCCACGGGCCC               CTCG ACCAGAG CGAG               CTTTTATTATGAATG  47 409
TspCOW1_09060  976119 ..  976140 + -14.5  -4.48713   GCGGGGAACCGAAAA           TGCGGCTGA TCGC TCAGCCGCA            TTTATTATTGCTGCG 100 53
TspCOW1_09150  986876 ..  986897 + -17.3  -5.60993   TCCCGTGATAAAAAA           CGGCCCGTC ATTC GACGGGCCG            TTTTTTTGTGGAGCG 100 54
TspCOW1_09180 NONE
        sac1  994414 ..  994456 +  -8.2  -2.71011   CTGGGCATCCACATC GCCCGTCCTCGCCCGCTCG AACAGG CG-GCGGGCGTCGTCGGGA TCGTTGCGCAGCAGT  52 378
TspCOW1_09230  996788 ..  996801 +  -2.4    -3.002   CCGCCCCTGAATCCG               TTGC ATCCCG GCAA                TATCTGTACAATACT  40 120
TspCOW1_09240 NONE
TspCOW1_09250 NONE
        ufaM NONE
TspCOW1_09270 NONE
TspCOW1_09280 NONE
TspCOW1_09290 1002677 .. 1002691 +  -4.9  -3.29511   GCCCAACCTACGTCT               GCCGG AAATG CTGGC               TTATCCCGGCCTACC  49 138
TspCOW1_09330 1009860 .. 1009887 +  -6.2  -2.66822   GTCGAGCTCCGTCCG        GGGCGCGGAAGCC GAC GG-TTCACCGCCC        GTATTATATTGGTTA  48 52
TspCOW1_09340 NONE
        ackA 1013982 .. 1013994 +  -6.3  -3.11207   CCCAACCTACAAGAC                TTGCA TCC TGCAA                TCTGTCTCTTGCATC  52 223
TspCOW1_09370 NONE
TspCOW1_09380 1017774 .. 1017786 +  -4.7  -3.06515   CCGCAGATTATCGCC                GCCTG CGC CTGGC                CTTTTCCAGATGCGC  47 223
TspCOW1_09600 1041025 .. 1041044 +    -7  -3.12351   CCCGCCAGTCCAGTC            CCGGGCGC GCCT GCATCCGG             TTCGATATCAGCAGC  52 254
        nadK 1053958 .. 1053968 +  -2.4  -2.57423   CCTGCAGCGCAAGTT                 CGGC TGG GGCG                 TGCATTCGTGAGTGT  38 4
TspCOW1_09710 1055853 .. 1055878 +  -8.3  -2.90723   TAACAATCCTCGTCA         TTGCGA-GGCGC GAA GCGCCGTGGCAA         TCTCGTTCGGGCTAC  56 38
        omlA 1057236 .. 1057251 +    -6  -3.35046   CTTCTTCATCTTCTT              GCCCGC CGCC GCGCGC               TGTTTGCGCACCTCC  53 334
        smpB 1060052 .. 1060082 +  -3.9  -2.52543   ATATTAGGGAAGACA       CACCGAAATCGGG GGCGA CCTGGTTTCGACG       TGGGTTACAAAACCT  41 119
TspCOW1_tm00010 1060641 .. 1060662 + -17.3  -4.56914   TCCACCAAACACAAA           GGGCCACCC GAAA GGGTGGCCC            TTTTGCTTTCGCTGA 100 213
TspCOW1_09780 1060976 .. 1061015 + -16.3  -4.02051   GAAGCGCCCCTGAAA  CGAAGCGCCGCGCGCCC CCTTAC GGGCGCGCGGCCACTCG   TTCTTTCACTTCCTC 100 28
TspCOW1_09880 1073876 .. 1073920 +  -3.9  -3.50853   AGAATGATTTCCGTG CCCGCCGCGGCCTCGCTGC GACGGAA GCCCCGCGGCGGCAGCCGG TTGTCCTTGAGCAGG  51 522
TspCOW1_09900 1078485 .. 1078506 + -17.3  -4.77438   TCCGGCAAACAAAAA           GGCGCCACC TCAG GGTGGCGCC            TTTTTCATGGTCGAT 100 50
TspCOW1_09920 1082128 .. 1082167 + -11.5  -2.52464   ATCCTACGGGAGCCC GGCAGGTCGGG--GCAGCCC GCA GGGC-GCAACCCGACCTGCA TCGCTTCAGGCCGGA  65 177
TspCOW1_09930 1083295 .. 1083331 + -14.3  -3.01712   ATATGGACTATATCT    CGGCCTACCGGATCGGC ATG GCGGATCCGGATGGCTG    TCTTAAGCAGGGAGA  82 102
TspCOW1_09940 NONE
TspCOW1_09950 NONE
TspCOW1_09960 1084879 .. 1084899 + -19.7  -4.98531   ATCCGCCACAACCAA            GCCGCCCCG ATC CGGGGCGGC            TTTTTGATTTGCCGC 100 40
TspCOW1_09970 1085838 .. 1085857 +  -8.6  -3.83026   ACATGCGTCTGTCGC            GCT-GACCG CCC CGGTCTAGC            TTTCCTGTCCACCCG  72 187
TspCOW1_09990 1087337 .. 1087352 +  -4.6  -3.27994   CTTCTCGGCCACCGG              GGCCAT CTCA AAGGCC               TTCATATAGGCTTCG  49 320
TspCOW1_10090 NONE
TspCOW1_10100 1099373 .. 1099393 +  -2.3  -3.92522   AAGCGCGCAGCGTGT            TGAACGCCC GAA GGGCGGCCC            TTTATGCCCTTCAGG  53 111
TspCOW1_10110 1100264 .. 1100274 +  -5.4  -3.31144   CATAGGTGCGGGTCA                 GGAT ATA ATCC                 TTGTCGCCATCGGCA  51 268
TspCOW1_10170 1108960 .. 1108973 +  -5.9  -3.38812   AAGCTGCCTTTACCC               CGGCG GCAA CGCTG                TATTCTTCCAGCACC  55 424
TspCOW1_10210 1116329 .. 1116345 +  -6.5  -2.72991   TTCCCTGCACAATCA              GGGCG CATACCA CGCCC              TGATTGCACCTCTAC  49 103
TspCOW1_10220 1117913 .. 1117926 +  -3.7  -3.07043   CCGGTGATTGTCCTC               ACGGC CCAG GCCGA                TATTCAGGTAATCCC  44 508
      ahcY_1 NONE
TspCOW1_10270 NONE
TspCOW1_10280 1124308 .. 1124322 +  -2.7  -3.06796   GGGAAACCGCCGACC               GCCTC CATCA GCGGC               TTGGGTACGCTCAGG  42 485
TspCOW1_10310 1126172 .. 1126186 +  -5.6  -3.27653   CAAAACCTGGGTTAT               GGGGCT ACA AGCACC               TGTTATCATCGCCGT  51 48
TspCOW1_10320 NONE
TspCOW1_10330 1127080 .. 1127099 + -16.4   -5.4111   CTGCACCCCGGGCAG            GGCCCCGC CATG GCGGGGCC             TTTTTTATGGTTCTT 100 52
TspCOW1_10400 NONE
        cspE 1133852 .. 1133879 + -15.6  -5.02074   GCGGCAATGAGCATG        CAGACCCCGCGC TAAG GTGCGGGGTTTG         TTTTTTCCGGCGTGG 100 51
TspCOW1_10420 1134845 .. 1134880 + -14.6  -2.87211   AATATTCATCCTCGC    CCGCGCCGGCCCGG ACCAGAAA CCGCTCCGGCGCGG     TCTGTACCGCCAGCT  73 419
TspCOW1_10450 NONE
TspCOW1_10540 1148640 .. 1148683 +  -5.8  -2.78816   GATAAAGGTACTTGC TTCAGCTGCGTCATCCCCGC GAAG GCGGGGATCCAGCGTCTGAC TATCCTGCGCAATAC  47 109
        folD 1161590 .. 1161600 +  -3.2  -4.05446   GCGGTTCCACGACAG                 CGAC TGA GTTG                 TTTCTCCTTCACCGC  58 19
TspCOW1_10670 1167847 .. 1167861 +  -4.9  -4.07568   GTTTCCGCAGGCCTC               CCTGG CTGTT CCGGG               TTTTGCCCCGCCGGG  62 61
        ppiB NONE
        lpxH 1169314 .. 1169325 +  -5.8  -3.17723   GAACCACGATGCGGA                CGCA CGGC TGCG                 TTCAATTAACAATAA  51 60
TspCOW1_10700 1170382 .. 1170412 +  -7.5  -2.83715   GACTCGGGCGTCAGC       TCCAGGTCGCG GAACTGACG CGCGGCCAGGA       TCTGCTGGTACTGGC  52 342
TspCOW1_10740 1173979 .. 1173995 +  -2.2  -2.87132   CCCGGATAGTAGACC              CGTTCG ATGGC CGGATG              TGTCTCCAGCCAGCG  40 474
TspCOW1_10860 NONE
TspCOW1_10870 1186440 .. 1186457 + -14.1  -3.88766   CTGGAAAAGAACAAA             GCCCGGC GGGT GCCGGGC              TTTGCTATCTACAGT 100 492
TspCOW1_10940 1194683 .. 1194713 +  -9.7  -2.83112   TCAGCCGTCACCGCG      ACCCCTGATCACGC CTCA GCGTGA-CGGGGGC       TATACTGACTTGCAT  61 18
TspCOW1_10950 NONE
TspCOW1_10960 NONE
TspCOW1_10970 1199386 .. 1199396 +  -5.4  -4.60041   TCGCTACGCTCGCAA                 TGAC ACG GTCA                 TTTTTACCCATGAGT  75 196
TspCOW1_11010 NONE
TspCOW1_11040 NONE
TspCOW1_11050 NONE
         psd NONE
TspCOW1_11070 1208485 .. 1208516 +  -5.1  -2.62668   TACCTGTCGGGTTAC      GCTGCGCTAACCCG ACCTA CGGATT-GCTCAGC      CTTGATTCAATCATG  43 164
TspCOW1_11080 1208926 .. 1208942 +  -2.9   -5.5208   CCCATGTTTTATATG              CCCGT TTCGCCT GCGGG              TTTTTTGTGTTATAC  86 83
TspCOW1_11090 1209432 .. 1209451 +  -9.2  -3.06302   AACCTGCGGCCACAC            CCGGCAGG GATG CCTGCCGC             TTGCCTGACCGTCCT  64 89
TspCOW1_11100 1210121 .. 1210167 +  -4.3  -5.28778   ACGGAAAACACGGAC GATT-GCTTGCCGGCGCACGCGC TAC GCGCG-GCGCCGGAGAACTAAAA TTTTTTGTCCGTGCT  84 60
TspCOW1_t00230 1214251 .. 1214297 +  -6.6  -3.09933   AACAGCGCAGCCGGG TTGTCGC--CG-TGCGCCGCGCG CGAG CGCTCGGCCCAGCGCAGCGACAG TTCCATGGATTCACG  52 330
TspCOW1_t00240 1216324 .. 1216334 +  -2.4  -4.58283   CCAATAATCGTCACC                 GGAG CGA CGCC                 TTTTTGCGCCACTTC  66 96
TspCOW1_11160 1219007 .. 1219041 + -10.6  -2.54523   CGCATCAGGATCCGC     TGATGGGTTGCGGCGC AGG GCGCCTTCACCCATCC     TACCTTCAGGTCTGG  62 75
        glgB 1226115 .. 1226133 +  -4.4  -2.94365   AGCGCGGAGCGCGTT             GAACGTCC GCA GGACGGCC             CTTTATGCCCTATGG  46 141
TspCOW1_11210 NONE
TspCOW1_11220 1227806 .. 1227816 +  -2.4  -4.07568   AGTGCATGGGTACAT                 CCGG GCC CAGG                 TTTTCCACCACCCAG  58 509
TspCOW1_11240 NONE
TspCOW1_11250 1230315 .. 1230348 +  -2.3  -3.05343   TCGGGCAGTTCGCCT     TGCGCAC-GCAGGGCT TCC AGCACTGCCGGGTCCA     TCTTCACCCTCTGCG  41 298
TspCOW1_11300 NONE
TspCOW1_11310 1234375 .. 1234392 +  -6.2  -3.32343   TAGTTGTCAGGCAGC             GTGCGG GGAAGG CCGCGC              TTATCGCGGTCTGCA  54 38
TspCOW1_11320 1235346 .. 1235358 +  -6.2  -3.31144   CTGACGCTCGCTCAA                CCGG CGGAC CCGG                TTCTCGACCTGCACC  53 367
TspCOW1_11600 1260378 .. 1260388 +  -2.6  -3.50302   CTTTAGATAATGCGC                 TAAA GAA TTTA                 TGTATTTTATCGTCA  48 255
TspCOW1_11670 1266546 .. 1266556 +  -5.4  -4.87665   CACGATAAAGATATT                 GATG CTC CATC                 TTTTTATCCGTAAAG  83 325
TspCOW1_11790 1281437 .. 1281447 +  -8.2  -2.78463   CAGCCGTTGCCGCTG                 CCGG CTG CCGG                 TCTGCTCGACAGCGT  52 304
TspCOW1_11830 1284936 .. 1284962 +   -15  -3.07291   AACCGGAGTTGAAAC         CACACCCGGGGC AAC GCCCCGGGCGGG         TTCACTCACCTCCTT  85 364
        flgA 1303611 .. 1303628 +  -5.5  -3.53012   GGGTCGTGTCGCGCG             GCGTCGT AAAA GTGACGC              TTTAGCGACGGCGGG  55 3
TspCOW1_12010 NONE
TspCOW1_12020 NONE
TspCOW1_12030 NONE
TspCOW1_t00250 NONE
TspCOW1_12040 1307767 .. 1307816 +  -4.8   -3.2794   TGAGATTCACCCCCT TGGGCACCACCGCCGCGCGGTG CTGATC CAGTTCACGGCGGTCGTTCTCA TTGATATCCATGGCA  49 498
TspCOW1_12170 1320729 .. 1320739 +  -2.4  -3.34233   CCTCCTCGGGCACCC                 CGCC CAC GGCC                 TTCTCCAGATTGTCG  44 434
TspCOW1_12230 NONE
TspCOW1_12240 NONE
TspCOW1_12280 NONE
         phr 1331025 .. 1331042 +  -6.2   -3.5774   GTATAATGGGCGATT             GGCCGG AAACAC CCGGTC              TTTCCAGGGTTGAGT  58 177
TspCOW1_12300 1332066 .. 1332076 +  -8.2  -4.07568   AGAACTTGAGCCAGG                 CGCC GAC GGCG                 TTTTCCAGCCGCGGA  72 238
        greB 1336078 .. 1336097 +  -7.8  -3.39895   GGCGCGCCCTCCTCC            TCCAGCCG CTGA CGGGTGGA             TTCGTTGATGCGACC  59 273
        nodI NONE
TspCOW1_12390 1338635 .. 1338675 + -12.5  -2.53876   CGTCATTCCGGCGCA  GGCCGGAATCCAGAAGCCG CCG TGGTCAATGGATTCCGGCC  TGCCTTGGAATGACG  71 117
TspCOW1_12400 1339585 .. 1339597 +  -7.7  -3.28924   CGATTTCAGCACCGA                CATCC ACT GGATG                TTCTCGAACGGGGTC  56 397
TspCOW1_12430 1342562 .. 1342578 +  -2.1  -3.28712   GCCCCTGCACCACCT              GGTGCAC GAA GCGCAGC              TTCTCCAACGCCCGG  44 79
TspCOW1_12450 1343974 .. 1344010 + -25.1  -3.53012   GCCACTGAGCGCCCG    GCAGGCGGGGCGGACAG TCC CTGCCCGCCCCGCCCGC    TTTCCCCCGCCCCGA 100 33
TspCOW1_t00260 1344401 .. 1344416 +    -9  -3.21276   GTATGACGTAGATCG              TGCACC CTCA GGTGCA               TATTCTCCCCGCGAC  59 277
TspCOW1_12470 1346673 .. 1346686 +  -2.3  -2.50778   TAGCGGCACAGCAGA               CAAGG AATC CCATG                GGTTTTCGATTCTGG  38 38
TspCOW1_12480 1348151 .. 1348169 +  -6.6  -3.16742   GCATGTGCAGCAAGT             CATGCCCG GGG TGGGCAGG             TTCCTGGGAATTGAG  52 458
TspCOW1_12500 NONE
TspCOW1_12510 NONE
TspCOW1_12520 NONE
TspCOW1_12530 NONE
TspCOW1_12540 NONE
TspCOW1_12550 NONE
TspCOW1_12560 NONE
TspCOW1_12570 NONE
TspCOW1_12580 NONE
TspCOW1_12590 1356761 .. 1356775 +  -5.6  -2.63631   CGGGCGCGTCGGGAT               ACGCCA TTC TGGCGA               TAATATCAGCATTGA  44 471
TspCOW1_12620 1358487 .. 1358508 +  -3.1  -3.30124   CCTAAAAACGGAAAT           GAAAAAG CGAAATTT CTTTTTC            TTCTCGAAGCTCCAG  45 309
TspCOW1_12630 1360040 .. 1360074 + -15.1  -3.21806   ACAAGGCGCTCAAGC    GGGACCGTCAAAAGCC TAGC GGCTTTTG-CGGCCCC     TTAGCTCTTCGTTGA  87 7
TspCOW1_12640 NONE
TspCOW1_12650 NONE
TspCOW1_12660 1362257 .. 1362310 +  -2.8  -3.40403   TAACCGGTCGTTACA GCCGACCTCGGCGCTGTCGCGCCG CCTCGC CTGAGCTTCAGCGTCAAAGTCAGC TTCTGGTCGCGAAGC  47 38
TspCOW1_12670 1363027 .. 1363047 + -11.8  -4.07568   GCCTCTAGCCGGAGA            CGGCCGCC GTCGA GGCGGTCG            TTTTCCGGCACAAAG  86 44
TspCOW1_12680 NONE
TspCOW1_12690 NONE
TspCOW1_12700 1365042 .. 1365059 +  -4.9  -4.08064   CATCAACTCGGAAGT             GCAAAAGC GTC GCTTT-GC             TTTTGCACGCCGGTT  62 71
TspCOW1_12710 NONE
TspCOW1_12720 NONE
TspCOW1_12730 NONE
TspCOW1_12740 1367047 .. 1367070 +    -3  -3.51924   TTCAGCGCCCGATTC          GGCTTGCGCAG CCA CCGGGCA-GCC          TTCTCTGCCTCACCC  49 137
TspCOW1_12790 1371433 .. 1371452 +  -7.8  -4.33274   CTGGGCAATGGTTTC            CTGATCCG TATC CGGATCCG             TTTTCATCATCTGCG  77 271
TspCOW1_12840 1376773 .. 1376786 +  -6.7   -3.5882   CGTTGACCACACTGG               TACCG TAAG CGGTA                TTTGGCGATCGTCTA  58 287
TspCOW1_12930 1391381 .. 1391431 +   -12  -3.16191   TCATAGCCGATCACT GGTTCCGGTAACCCATGGTCGAT GATCCA ATCGGCCATGGGT-ACGGCAGCC TTGCTCAGGGTCTGG  66 512
TspCOW1_12990 1405873 .. 1405886 +  -2.3  -3.45849   CACGCATCTGGTGAC               GCAGG GTTC CCTCC                TTGTCGTGGTATCCG  46 389
TspCOW1_13030 1409298 .. 1409311 +  -6.7   -3.4247   GTCACCGAATCGTCG               TCTGC ATTG GCAGA                TATTATTGCGATTAT  56 217
TspCOW1_13040 NONE
TspCOW1_13050 NONE
TspCOW1_13060 NONE
TspCOW1_13070 1416055 .. 1416065 +  -2.4  -3.22091   GTAATGCGACCACGA                 GGGG TCT CCAC                 TTGATGGATTAACCT  44 183
TspCOW1_13150 1425387 .. 1425397 +  -8.2  -2.59971   AGGTTCAATTCCTTC                 CGGC CAC GCCG                 ATTGATCTCTAATCG  53 58
TspCOW1_13170 1427063 .. 1427078 +  -3.2  -3.07043   CCCGAGCCTGGAGCC              GAACGA TGAA TCGTCC               TCTTCACCTGATCGC  43 17
TspCOW1_13180 1428196 .. 1428210 +  -5.6  -3.14132   CACCGCCGGGATAAT               GCGCTC CCT GAGCAC               TTCGTCGAGCAGGCC  49 236
TspCOW1_13210 1431217 .. 1431230 +  -3.1  -3.27994   ACAGGTTGTGGTAAT               GC-GTC AAT GACTGC               TTGATATCCAATTCG  46 324
TspCOW1_13230 1433593 .. 1433642 +  -6.3  -3.49482   AGACACTGGATCCCC GCCTGCG-CGGGGATGACGCAG CGAAAGT CAGTGCCATCCCCGTCTCAGAC TATTTGATGATCTGA  58 245
TspCOW1_13260 NONE
TspCOW1_13270 NONE
TspCOW1_13280 1438006 .. 1438018 +  -2.6  -3.15544   TCAAGCTGCTGACGG                TCGC GGCAG GCGG                TTGATGCGGATCACC  41 9
TspCOW1_13290 1439183 .. 1439194 +  -7.2  -3.02511   CGGCGCGAAAATCCA                CCGG CAGC CCGG                 TCTTCCAGGGCTGAG  51 356
TspCOW1_13310 NONE
TspCOW1_13320 NONE
TspCOW1_13330 NONE
TspCOW1_13340 1444428 .. 1444447 +  -2.8  -3.47431   CCGTTCCGGTTTCTG            CGGCTG ACATGACC CAGCTG             TTGATCTTTGCGTAT  47 14
TspCOW1_13350 1445618 .. 1445636 +  -5.3  -3.65812   CTGTACCGCCGCGGT            GTCTTCCG CTGA CGGA-GAC             TTCTGTTCACAGCGG  58 14
TspCOW1_13360 1447260 .. 1447284 +  -2.2  -3.31144   AAGCCCGAGATAGGC         CAG-G-TAGGGA TTT TCCCTGTCGCTG         TTGTCCAGGTCCCAC  44 518
TspCOW1_13380 1449245 .. 1449261 +  -4.4  -3.88291   ACCTGCACCATGCGG             CGC-TCG CCGT CGAAGCG              TTTGTAGCCGTGATA  58 251
TspCOW1_13420 NONE
TspCOW1_13430 NONE
TspCOW1_13440 NONE
TspCOW1_13450 1456166 .. 1456194 +   -11  -3.30124   GCGCCAGCCGGTAGA       CCCGGT-C-GGCCG CCT CGGCCAGCGCCGGG       TTGTGGGAAATGGCC  66 362
TspCOW1_13540 1469590 .. 1469613 +  -6.6  -3.63895   CCCGCCGGAGTACCG          GCGAGCGGGCG CTC CGC-CGTGCGC          TTTCACCTGCTTCAG  61 43
TspCOW1_13560 1471513 .. 1471528 +    -6  -2.73364   CGGCCGCTTCATGCC              GGCCAG GCGG CAGGCC               TGCTTGACATAGCCG  47 175
TspCOW1_13580 1473004 .. 1473021 + -14.1  -4.96848   TCCGCCATATAAAAA             GGGCCCC GGTT GGGGCCC              TTTTTATATGGCGGA 100 316
      mltF_2 1475551 .. 1475603 + -14.7  -3.36671   GCACCTCGCCGGCCG CGGCGGCGAGTTCGGCCTGCGCCAG GGC CTGGCGCATCCAGTATTCGTCGCGG TTATGCGATTCGGCT  80 417
TspCOW1_13630 1477783 .. 1477795 +  -3.3  -4.62783   CCATAGTCATCTGTG                CTGCT TGC AGCTG                TTTTTCCGATCAATG  69 35
TspCOW1_13640 NONE
TspCOW1_13650 NONE
TspCOW1_13660 1480081 .. 1480096 +  -7.6  -2.71731   ATATCCGGCCGCCAG              TCGATC AGCA GATCGA               TCGTTGAAGCATCCA  51 449
        speD 1482564 .. 1482578 +    -7  -2.82082   GGCGCTCACCCTCAG               GGCGCG CTA CACGCC               TGGTTGGTCATTGAT  51 248
TspCOW1_13910 1507261 .. 1507302 +  -6.3  -3.34947   CACCCGGTAGCGCTC GGCGGCTGACGTCAGGCGC GCCT GCGCACGGCGGTAGACGTC  TTGTCCCGCTTGTTG  53 325
        xseA 1529144 .. 1529159 +  -4.6  -2.63596   CGTAACCCGACACCC              TCGCTG TGCG CAGCGC               TGATCTGCGCTACCG  43 111
TspCOW1_14170 1530078 .. 1530091 +  -2.4  -3.68073   ATTGCCGCTGTAACT               TTCC GCCAGG GGAA                TTCTTGACTAGACTG  51 67
TspCOW1_14180 1533867 .. 1533878 +  -7.2  -3.14132   CGCTGCCCAGTGCAT                GCGC AACA GCGC                 TTCGTGCGGCGAGGA  52 471
TspCOW1_14220 1539588 .. 1539610 +  -3.2  -2.64735   CGCTGGACGCGGGAC           GGCTGGTCTG ATG CGCCCCGGCC           TGGTGTCCCTGGCCT  40 15
TspCOW1_14230 1542130 .. 1542174 + -15.1  -4.08216   AAGGTGGGAAAAAAA GGGGTCGGTGACAAAACGCAA TCA TTATCATTTGTCACCGACCCC TTTTAAAGAACATCA 100 59
TspCOW1_14430 1561177 .. 1561209 +  -5.3  -3.69434   GGCAAGACCCCGCTG      TGACGGCCACGCCGG CCG CCGGTGCAGACGGCA      TTTCCCCTTCGTTGG  58 23
TspCOW1_14440 1563366 .. 1563382 +  -4.4  -3.23692   TGGCGGTAACGGCAT             CCT-CCG GGAC CGGCAGG              TTGGTGCTGATGCTG  49 257
        fimX 1566153 .. 1566207 + -12.9  -3.14931   GTAACCCATCGCTGT GGCGGCGGGT-G-ATGGGTTACGGCGC TAC GCGCCTTCACCCATCCTACTCGCTGCG TTAATGCCGCCTGCG  76 98
TspCOW1_14490 NONE
TspCOW1_14500 NONE
TspCOW1_14510 1574814 .. 1574858 + -15.1  -4.48987   TCAATCATCCTAAAA GGGGTCGGTGACAAAACGCAA TCG TTCTCATTTGTCACCGACCCC TTTTAATTGTCGCGG 100 28
TspCOW1_14660 NONE
        xseB NONE
TspCOW1_14680 NONE
         dxs NONE
        queD NONE
       folE2 1604882 .. 1604904 +  -7.6  -3.04461   CAGCCTCTTAACCTC           AGCATGCCCG TTG CGGGCATGGA           TCTTCGCAATCACTG  57 84
TspCOW1_14830 1616285 .. 1616326 +  -7.3  -3.05596   GAAGGCGCTGCGGCG CCGTAACCCATCA-GGGGCG TCT CGTACAATGATGGGTTACGC TTCGCTCCACCCATC  54 268
        hdtR 1617488 .. 1617523 +    -6  -3.63336   AGATTCTGCATCGCA    TTGCCCTCGGTTTCGG CGCC CCGCAACGGCGGGGAA     TTTGCGATGCTATCT  59 218
TspCOW1_14930 NONE
        gcvR NONE
TspCOW1_14950 1628847 .. 1628858 +  -7.2  -3.18264   ATCCAGAAGGATGAT                CCGC GTGT GCGG                 TTGCTGGATCCCGGC  56 111
TspCOW1_14960 1630324 .. 1630338 +  -6.4  -3.21924   CTGGCGGATTACGCC               TCGGAG AAT CTCTGA               TCTTCTGCGGCATGA  54 11
       ompP1 1644633 .. 1644650 + -14.1  -5.52986   GCCACCAACAAAAAA             GCCCCGC TGAT GCGGGGC              TTTTTTTGCTGCCGT 100 133
        yfgC 1647388 .. 1647404 +  -6.5  -3.40522   AGCATCGAATCATCC              CCAACCC AGG GGCTTGG              TTATGCTGGCACCCT  56 317
TspCOW1_15100 NONE
        soxY NONE
        soxZ NONE
        soxA 1649633 .. 1649656 + -16.8  -5.64421   TGATCAGCCAATCAG          CCCGGTTTGG TTCG CCAAACCGGG           TTTTTTGTTTAAAAT 100 51
        soxB 1651606 .. 1651623 + -14.1  -5.63517   TTCACGCACCGCAAA             CGGCCGC ATCC GCGGCCG              TTTTTTGTTTACAAG 100 54
TspCOW1_15150 1653497 .. 1653519 + -11.3  -3.01712   CAGCTTGCGCAGTAG          TCCCGCACGG ATCT CCG-GCGGGA           TGTTGCGAACCCCAC  62 470
        metR 1666441 .. 1666462 +  -2.9  -3.57144   TCTCGCGCCAAGGCC           TCAGGGTGGC AGA GCCGC-CAGA           TTTCCCGATCCCGGC  49 314
        nrdA 1669402 .. 1669417 +  -6.8  -2.69151   GAGGCCTGTCAGTAG              GCG-GGG AAA CCCGCGC              TCATCTCTGCCCGGC  50 26
        nrdB NONE
TspCOW1_15380 NONE
TspCOW1_15390 NONE
TspCOW1_15400 1684951 .. 1684961 +  -4.6  -3.53224   TTGGCGCGTTACTCG                 CGGG ATT CCTG                 TTTGGGCACCGGATC  53 127
TspCOW1_15430 NONE
TspCOW1_15440 1687899 .. 1687914 +  -4.8  -2.81272   GGGCATTGACATTTA              GATAAT AACG ATTATC               ATTTGCATCATGGTG  44 60
TspCOW1_15450 1688741 .. 1688751 +  -2.4  -3.14132   CATAGATCTTCGTGC                 CGCG GTC CACG                 TTCCTAGCGGCCGCC  42 504
TspCOW1_15580 1699574 .. 1699591 +  -6.9   -3.1505   GGTGATCAGCGCCTT             GCCGAAG CTGG CCTCGGC              TTCGTAGAGCATCCT  52 313
TspCOW1_15750 1713735 .. 1713746 +  -4.4  -3.90744   AGCAATCTGTTCTAT                TCGA TTTA TCGA                 TTATTTGCCAACCCC  59 130
TspCOW1_15760 NONE
TspCOW1_15770 NONE
TspCOW1_15780 NONE
TspCOW1_15790 1719984 .. 1720027 +  -8.1  -5.38047   CCCGACACTCACGGC GGGAAGGTCGGGTTACGCCC TCTTC GGGC-TGACCCGACCTACGA TTTTTTATGTCACTC 100 184
TspCOW1_15850 NONE
TspCOW1_15860 NONE
        gacS 1731685 .. 1731726 +  -7.1   -3.0362   CCATCGCCGTCCGGC GGCCGGGTGATGGAGTACG GCGC TGTGCGCCTTCACCCATCC  TGTCTGCTATTTCCC  54 63
        nadB NONE
TspCOW1_16080 1750945 .. 1750963 +  -3.1  -4.12188   GTAGCGCCGCAGCTC            GGTC-AGC ATCG GCTTGGCC             TTTTCCAGGTAATAC  59 492
TspCOW1_16110 NONE
TspCOW1_16120 NONE
TspCOW1_16130 1753671 .. 1753709 + -10.2  -2.57931   GTCCGGACGGGCGCG   CGCGGCCAGCAGCAGG CGGCCGC CCTGCTGCTGCACCCG   GTTGTAGAGGGTGAA  57 426
        purM NONE
        purN 1758839 .. 1758861 +  -5.4  -3.87815   ATGTCGGATTACACC           CTGCGGGCTG ATC CGACCTGCGG           TTTATCCACATCGAA  61 270
TspCOW1_16200 1759876 .. 1759894 +  -8.8   -3.4072   CAGAATCTCCTGCAT             CGCCGC GATGAAG GCGGCG             TTCTCCTCCGGCGTG  64 138
TspCOW1_16300 NONE
TspCOW1_16310 NONE
TspCOW1_16320 NONE
        kdsD 1769675 .. 1769701 +   -10   -4.4715   GGGGGTGGTATAGCC         GGACGCAGCGCC CCT GGCGTTGGGCCC         TTTTATCAATTCCGC  88 28
        kdsC NONE
        lptC NONE
        lptA NONE
TspCOW1_16370 NONE
        rpoN NONE
      yfiA-2 NONE
TspCOW1_16400 NONE
        hprK NONE
TspCOW1_16420 NONE
TspCOW1_16430 NONE
        ptsH NONE
        ptsI NONE
        mgtE 1780417 .. 1780460 +    -3  -4.05446   TTCCTGCTGTGATTT CCA-CACAGGTTGGGCTGAGC CAC GCGAAGCCCAACCTACAATGG TTTGTCATTGCGAGC  58 29
      trpB_2 1783535 .. 1783545 +  -4.6  -3.57144   ACGCGGGCCATTGTC                 GGGT TAC GCCC                 TTTCGGGCTAACCCG  53 111
TspCOW1_16530 1786307 .. 1786318 +  -2.2   -3.5362   GCGCGGCTGCCAGCC                CGGT GATC ATCG                 TGTTTCTGGACATTG  48 389
TspCOW1_16720 1809300 .. 1809310 +  -2.4  -3.73775   GTGCAGCTCCGACAT                 GCAG GCC CAGC                 TTTGCTCCCGGTCCG  51 370
        glgA 1822643 .. 1822654 +  -7.2  -2.67209   ATTCTCTGTTTTCTC                CGCG CCTC CGCG                 TCCTCTGCGTTGATG  50 232
         ppc 1825727 .. 1825746 +  -3.6  -2.65264   CGCATCCGACTGAGC            GCAGAT CATGACAA ATCTGC             TGCTCTGGCTACTCG  42 204
TspCOW1_16850 1827003 .. 1827018 +  -6.2   -4.1673   GAAGCGGGCGTGGAG              TGGTTT TATG AAACCA               TTTGTTCGCGCCTTC  69 143
        metG 1831175 .. 1831186 +  -3.6   -3.4252   CCCCGCCCCACCCGG                CGGG CAGG CTCG                 TTATAATAGCTGGCG  49 59
        rnfA NONE
TspCOW1_16900 NONE
TspCOW1_16910 NONE
        rnfD NONE
TspCOW1_16930 NONE
TspCOW1_16940 1836742 .. 1836752 +  -6.8  -3.75332   TCCAGGGCGAAGCGG                 CAGC CCA GCTG                 TTTCAGTTCCCGGAT  61 337
       nth_2 1840124 .. 1840139 +  -5.4  -3.39018   GTCGAAAGGCCCTAG              TGGACT GATC GGTCCA               TATTTACGATAATCC  53 26
TspCOW1_16970 1840674 .. 1840702 +  -2.9  -2.52543   CGGTGAAGGCAAGTG        CGGCGGCAATCAG TAA CGGACTGACCCCG        TGAGTTCGGCAACCT  39 10
TspCOW1_16980 NONE
TspCOW1_16990 1842415 .. 1842437 +  -2.6  -2.78384   GGACAGTACAGTATT           TGCAGGGG TGCGCAT TCCCTGCC           TGTCGTCACGCAACC  39 97
TspCOW1_17000 1843539 .. 1843555 +    -3  -3.81146   AGGCAGGCCGCCCAG             T-GCAGC CATT GCTGCCA              TTGTTCATTCAGGCC  56 497
TspCOW1_17020 1845258 .. 1845283 + -16.1  -3.02947   GCGCTGCATGAAAAA         AGCGGCCTCCG TCAC CGGAGGCCGCC          TGTCTGTCGTCCCTG  88 30
TspCOW1_17100 NONE
TspCOW1_17110 1853620 .. 1853632 +  -6.2  -3.28447   AAGGTGGGAATGTCC                GCCG CCATC CGGC                TATTCTCCTCACTCC  54 201
        nadC 1854972 .. 1855002 + -10.5  -2.93348   CGCCCGTGCACATGC      CGCTGCCGGCGATGA TGA TCG-CGCCGG-AGCG      TATCCTGTTGATGGC  59 478
TspCOW1_17140 NONE
TspCOW1_17150 1858269 .. 1858315 +  -9.5  -4.26079   ACGGACAAGAGTAAA TGCTGTTCACGTTGCC-GGGCGC ATA GCGCCCTGGCAACGC-AGTAGGA TTTTCCGTGCTTTCC  83 78
TspCOW1_17260 1874337 .. 1874349 +  -6.2  -3.75153   CAGGATCAATGCATG                CCGC GACCG GCGG                TTTACATTGCAGACC  61 65
TspCOW1_17270 1875026 .. 1875049 +  -4.4  -2.76263   GGTCTAGCCTCATAA          TGGGGTGCCT GTTC ATGCGCCCCC           TCGTTGACTCATCGC  44 131
TspCOW1_17280 1875514 .. 1875564 +   -20  -3.53343   GGCCTTTTCCAATAA GGGGTCGGTGACAATTGATAGT ACGAATA ATTCTCAGTTGTCACCGACCCC TTTAAAAAAGGCATT 100 127
TspCOW1_17390 1890235 .. 1890261 +  -2.8  -4.57341   GGGGCGCAGGGGGCA         TGGGGGGTCGCG CCA TGCTAGCCCGCA         TTTTTCACCGCCCTT  69 5
TspCOW1_17400 NONE
TspCOW1_17410 NONE
TspCOW1_17420 NONE
TspCOW1_17430 NONE
TspCOW1_17440 NONE
TspCOW1_17450 NONE
TspCOW1_17460 1895474 .. 1895488 +  -6.4  -3.09933   GTCACCATCAACCGG               TTGCCG CAA TGGCAA               TTGCCTGGCTTGGCC  52 90
TspCOW1_17470 NONE
TspCOW1_17480 NONE
TspCOW1_17490 1899904 .. 1899924 +  -4.6  -3.29324   TCTCGGGGGCCGAGG           CC-CCGGCG GTGA CGCCGATGG            TTGCCTTTCCCTCGA  49 182
        rpsT 1908229 .. 1908247 +   -16  -4.28432   TTGCGCAAAAGAAAA             GGCCGGTC ACT GACCGGCC             TTTTGCGTTGGGGTT 100 60
TspCOW1_17610 NONE
TspCOW1_t00310 1913170 .. 1913200 + -11.9  -2.66235   AGAATTCCAGTCTAT      CCGT-CATCCCCGC GAAG GCGGGGATCCACGG       CTTGGTTGCTCTGTC  69 246
TspCOW1_17640 NONE
         fic 1916876 .. 1916893 +  -6.9  -2.98823   TCGACGAGCCGGGCT             CGCGACG AATT CGTCCCG              TGTATCTCCGCACGC  51 331
TspCOW1_17760 NONE
TspCOW1_17770 1936752 .. 1936794 + -14.1  -2.86271   GCCGCCCCGACGCCG CGGC-GGCCCGGCCGACGGCC AGC GGCTGT-GGCCGCGCCAGACG TCCTTGTCGTCGGGA  71 512
        sseA 1939460 .. 1939478 +  -6.1   -2.8055   TATGATAATCAGCGA             GATGTAT ATTAA ATACATC             TAATATTATCGAATC  49 107
TspCOW1_17820 1940260 .. 1940294 + -11.2  -3.29144   CAGGGCATCAATCCG     CCGTACCGGGCAGCAG CGC CTGCAGCCGGGCCCGG     TTCTCCACCACCTGC  71 133
        ispG 1942156 .. 1942166 +  -4.6  -3.60419   GCGTGATCAGGGAAT                 TCGC ATG GCGG                 TTGTCATTTCCACCT  53 35
TspCOW1_17910 NONE
TspCOW1_17920 NONE
TspCOW1_17930 1950203 .. 1950213 +  -2.4  -2.54896   GCGACAAGCCCGGCA                 GCGG CGA CCAC                 TGAATTCAATACAGC  38 12
TspCOW1_17940 1950701 .. 1950716 +    -6  -5.28778   CCGCCCCCGGCAAAA              CCCCGC AACT GCTGGG               TTTTTTGTGCCTCCT  90 52
TspCOW1_17950 1951989 .. 1952008 +   -15  -4.44667   GCGAGCAAACCGCAA            CGCCTCCC TTCG GGGAGGCG             TTTGTTGTTGCAGCG 100 82
TspCOW1_17960 1952422 .. 1952450 + -15.9  -3.89212   GGAGTTTATGCCCCC        TTGCCGGGGCGCC GCC GGCGCCCCGCCGG        TTTCCTGTCTCCCTG 100 46
TspCOW1_17980 NONE
TspCOW1_17990 1955434 .. 1955465 + -15.2  -3.39936   TGCTATCGATAATAT      TTCATGCCG-GGCGC AAA GCGCCTCGGCATGCA      TTATGAAATTTCCGT  87 191
TspCOW1_18020 NONE
TspCOW1_18030 1957922 .. 1957963 +  -8.2  -2.80291   ACCCGACAGGTTCGA TGCCAATGTCGGGTTACGCCC TAT GGGC-TAACCCGACCT-G-CA TATGCTGGGATAATT  54 123
        msrB 1959106 .. 1959151 +  -8.3  -2.62171   GTAACCCGACAGCCC GCGGCATGTTGGGTTACGGTGC CAT GCACC-TAACCCAACCTACAGA ATCTTTGCGCCTCTG  53 129
TspCOW1_18100 NONE
TspCOW1_18110 1966899 .. 1966953 +  -9.3  -2.94099   ATAGCTGCGCATGTC TGCCCCCTCTGCTTCGGCAGGACGTCA GGA TAACGTCCTGCCCG-GAAG-GGAGGCA TATATCCTGCCAGAA  62 458
TspCOW1_18140 NONE
TspCOW1_18150 NONE
TspCOW1_18160 1968955 .. 1969000 +  -9.7  -3.01712   CCCGCGGCCGGAATA CCCTTGAGGGCGCATGTGCGCA GTC TGCACGC-TAAGCTCTCAAGGG TATTCCGGCCGCGGG  62 199
        gloB 1971142 .. 1971159 +  -6.9  -3.32343   GCGTAACCCGACACT             CACGACG GCAA CGTCGGG              TTATGCCCGTATCGG  56 108
TspCOW1_18190 1971662 .. 1971702 +  -4.8  -4.63486   CCCATCACGGCACTG GAGATCGCGATGGGTTGAGC TGC GCTTCACCCATC-CTA-CTC TTTTGTTACGCCACT  72 86
TspCOW1_18210 1973535 .. 1973554 + -13.6  -3.02511   AACATGAGGCGAACA            GGCAGGTG ATCA CACCTGCC             TGTTACACGGCTGCC  79 34
      iscR_2 1974906 .. 1974938 + -24.1  -5.26875   GGTGCCCTCCTCCGG      CGGCCGGCCCCGCGC CCT GCGCGGGGCCGGTCA      TTTTTTGCTTGGCAG 100 54
      speE_1 NONE
TspCOW1_18250 NONE
TspCOW1_18260 1977234 .. 1977271 +  -3.3  -3.53091   AGGATACGGTCTCGC   CCGCCGGC-GTGCCCG GGGCCGG CTGGCACTGGTGGTGG   TTTCACCCAGGCCAT  49 85
        roxS NONE
TspCOW1_18320 1984099 .. 1984135 +  -8.5  -2.81045   ATCTCCTCGGCCACC    GCGCCCTGTTCCTCGGC AGC GCTGGCGATCTGGGTGC    TCATGTTGTGGATGG  54 228
        hprA 1987099 .. 1987133 + -17.1  -3.59979   TCGAATTCCTCCAGG     TCCGAGGCCGGCGGC ACATC GCGTCCGGCCTCGGA     TTTGCGCTCGAACAG  89 428
        trmH NONE
TspCOW1_18370 1989044 .. 1989059 +  -2.4  -4.07687   CTGACCGGTACAGGG              CCTCGG AATC CCGGTG               TTTTCCGGCCGGCCT  56 37
TspCOW1_18380 1989350 .. 1989400 +    -5  -4.31433   GACGAATAGGGCCGC CGCGCCCCGTTCCTGTTCCCGCCC GCG GGGCTGCAACCGGCCCCGGCCTCG TTTATTATCCCGATG  67 32
TspCOW1_18390 NONE
TspCOW1_18400 1990541 .. 1990558 +  -2.7  -3.15544   CTCATGGAGGCAGGT             CTCGA CCAGTTCA TCGAG              TTGCTCCAACTCCAG  44 101
TspCOW1_18430 1993670 .. 1993712 +  -6.2  -2.90194   GCCGGGACCTCCTGC TCGAGTTCGGCGGTTGTG CGACCTT CCCAGCTGCCGAAGCCGA TCTCCTTGAAACGAT  48 420
TspCOW1_18470 1996419 .. 1996430 +  -7.2  -2.95388   ACTCTGCGGCCTCTG                CGCG CCTT CGCG                 TCTCTGCGTTGAATA  53 279
TspCOW1_18490 2000294 .. 2000313 +  -3.4  -2.57344   ACCACCTCCGCGGGC            GCCTCCCC CACC GGCCAGGC             CTTATAGCCGCCCTC  39 347
TspCOW1_18520 NONE
        argA 2005855 .. 2005866 +    -3  -3.75153   CGTGTCCTTTGTGGT                GATT CTTT AATC                 TTTAACTTCGAAAAA  52 193
        cpdA 2006756 .. 2006767 +  -3.6  -2.94912   TAACTCTGCGATCTC                TGCG CCTC CGCG                 TCTCTGCGTTGAACA  44 100
       fumC1 2008272 .. 2008286 +   -10  -4.65895   CCATCACCAGTGAGT               CCGGAT GTC ATCCGG               TTTTTGCATGCCACC  90 92
        trxA 2020248 .. 2020298 +  -3.2  -2.52676   TCGACAGCAACATCT GAACG-TG-CCGGCGGTCGTCC-GC AAAG GCTGGACGGCCGCCGAACGGCATGC TAGATTAACCGGATA  39 24
         rho 2021830 .. 2021854 +  -7.8  -2.78018   GGTTGGAGATTGCCA          CGTCGCTGCG CTCCT CGCAATGACG          TAATTAATCAGAGGT  54 149
TspCOW1_18750 2032534 .. 2032546 +  -3.3  -4.30978   TTTCTCGCGCCTTTG                GCACG ATC CATGC                TTTTCCTGGATTCCA  64 269
TspCOW1_18760 2034022 .. 2034063 +  -5.9   -3.1355   ATGAATCGGGTCAGA C-CCGGG-TCCGCGGAT TCATCCGGCC AGCCGCGGATCCCGGCG TTGGATGTCGATCAA  49 37
TspCOW1_18900 NONE
TspCOW1_18910 NONE
TspCOW1_18990 NONE
TspCOW1_19000 2060883 .. 2060908 + -16.2  -5.40072   GACCCTCGTATACAG         CAACGGCCCC GCTTCA GGGGCCGTTG          TTTTTTTGCCCCCGA 100 52
TspCOW1_19020 2062451 .. 2062487 + -13.8  -2.73681   ACGGGATTTCTGATC   GACCCGT-CATGCCGGC GAAG GCCGGCATCCATGGGTC    TGATTCGACTGGATC  76 226
TspCOW1_19030 NONE
TspCOW1_19040 2066112 .. 2066124 +  -4.7  -3.29144   CGATAGCCTGAACAT                CCGCC CCT GGCTG                TTATCGGGCCGATAC  49 244
TspCOW1_19050 2067046 .. 2067060 +  -3.4  -3.33492   GCTCCACCCATCCTA               CGCACG ATC CGGGTG               TTGTAGGATGGGTGC  47 61
TspCOW1_19060 2068534 .. 2068546 +  -2.6  -2.64616   GCCGCCCGCCCCAAC                CGGG CCTGA TCCG                TGCTCTCACTGCACC  38 17
TspCOW1_19070 2068947 .. 2068974 + -11.2  -2.62184   ACTCAGCACGTAGGA        TGGGTGGAGGCG CGTG CGCCGCAACCCA         TCATGTGCCGACCAC  66 28
TspCOW1_19100 2071506 .. 2071557 +  -8.1  -3.08464   TAACCCGACATATAC CGCGATC-CACGTCGGGTTACGCCC TGAC GGGC-TAACCCGACCTACGATTCCG TTGCCTCCGTCATCC  57 48
TspCOW1_19200 2079810 .. 2079828 +  -3.1  -3.05596   ACCCATCGCATTGCC             GGGTAAC GATGG GTTACGC             TTCGCTCCACCCATC  43 213
        thiD NONE
        thiE 2081841 .. 2081852 +  -4.4   -3.0094   ACTCACCCGACCTGC                GGAT TTGC ATCC                 TGTATCTGCCTGACA  46 113
        hemL NONE
TspCOW1_19240 2085350 .. 2085370 +  -4.7  -3.14132   CGCTGCTGCGGATCG           GC-GGCCT CCAGCC AGGCCTGC            TTGGTGGCCAGCGGC  47 201
TspCOW1_19290 2090652 .. 2090708 +  -2.6   -5.4505   CTTCGCTGCGGCCTT CCTGCTGACCTGCTTTCCGGCGGCCGC TTTG GTGGCCGC-GGACTTCTTGCCGGCCGG TTTTTTCTTCACGAC  90 436
         pfp 2093437 .. 2093453 + -15.1  -5.26316   AGCAATCCGCAGGAA              GGGGCGC ATC GCGCCCC              TTTTTTGTGCCCTGC 100 41
        hppA 2095907 .. 2095927 + -16.9  -3.91402   TAGTCTTTTGATTCA            GGGCCGGTA TAA TACCGGCCC            TTTCCGTTTATCTGG 100 132
         ppa 2096997 .. 2097010 +  -8.1  -2.73364   CCAGCGTCATGGCCC               GGACG TCAT CGTCC                TGATTGAAATCGCGC  51 522
        moaC 2098432 .. 2098457 +  -7.5  -3.14344   TTCAGTTCGGCCAGG         CGCT-CCGGCAG GGC CAGCTGGTAGCG         TTCGTGCAGCGCCTG  54 368
TspCOW1_19390 2099404 .. 2099433 + -23.7  -2.73364   CTGCCGGTCAACTGA       CCCCGTTGCGGTC AGTT GACCGCAACGGGG        TCATTGCGATGCCCG 100 26
TspCOW1_19400 2101060 .. 2101084 +  -4.2  -2.79183   TCCATGACCTCGTGC          TCGTCCCCGG ACTCG TCGAGGATGA          TCTCCTCGACATCCA  41 467
TspCOW1_19420 NONE
TspCOW1_19430 2104574 .. 2104585 +  -2.2  -3.64703   GAGCCGCCCAAACGC                GGCA TTGA TGTC                 TTTACCTGACCGGGG  51 5
TspCOW1_19470 NONE
TspCOW1_19480 2108940 .. 2108953 +  -9.5  -3.29144   CCTTCGAGGAGCGTA               CCCCG GTCC CGGGG                TTCTAGGACCGGTCA  66 6
TspCOW1_19500 2110509 .. 2110535 +    -5  -5.40072   GGTTGAGTATCGTAG         GATGGGTGAAGC CGG GCGAAACCCATC         TTTTTTTCGGGAGCG  90 218
TspCOW1_19540 2114387 .. 2114418 + -15.1  -2.52464   TAAGCCCCACCCTCA      GCCCGGCGGC-GCC TCACC GGCCGCCGCCAGGC      TGCCTTCCCCGCAAC  81 38
TspCOW1_19570 2116829 .. 2116850 +  -9.3  -2.53876   AAGCAGCCTCATCCC           GGTAGGCCG CGAA CGGCCCGCC            TCGGTTACAATAGCG  59 21
         uup 2118838 .. 2118850 +  -3.3  -2.72344   ATCAACCTGTTACAC                CCCTG CGC CAGAG                TGGTTGCAGATGCCG  41 89
TspCOW1_19590 2119231 .. 2119264 + -19.6   -4.0257   TCGCCTGAAGCGGGA     CAGCGCCGCGGACT CGTCGC AGCCCGCGGCGCTG      TTATTCCTTTTTCAG 100 33
TspCOW1_19610 2120131 .. 2120150 +  -6.4  -3.13403   GAAAGGCCGTCTCTT            CG-CGATCG TCG CGGTCGGCG            TATTGCTCCCAGGCA  51 215
TspCOW1_19660 2124195 .. 2124207 +  -2.6  -3.91737   TCTCAGGTCTTTTTC                CTGC GGCGG GCGG                TCTTCTTTTTCTTCG  53 47
      nirS_1 2139612 .. 2139643 + -20.2  -3.35679   AAGAACCTAAAAAAA      ACGGCCGGTAACGC TCAG GCGTTACCGGCCGC       TTATACGTCAGACCG 100 279
TspCOW1_19840 2142126 .. 2142164 +  -5.1  -2.52464   GCCCGGAGAGGATCT  GCGCGGTC-AGGCCGGCC CGGC GCCCGACCTCGACCGGGG   TGAGTTGCGCCCGGC  44 132
TspCOW1_19880 2149112 .. 2149165 + -15.9  -2.91681   CGGTTCCTGAGCTGT GCAGCTGCGCAGGTCGGGTTA-GCCC GCA GGGCGTAACCCGACGCGGGCCGCCGC TGTGTCGGGTTACGC  87 31
TspCOW1_19910 NONE
TspCOW1_19920 2155775 .. 2155792 + -11.3   -3.0094   ATCACTTGACCGTCA             TTCCCGC GAAG GCGGGAA              TCTATGTGCCTCGGC  68 98
TspCOW1_19940 NONE
TspCOW1_19960 2160715 .. 2160737 +  -7.6  -3.72324   GACACCGCTGTAGGA           TGGGTGGAGC GAA GCGCAACCCA           TTGTTGGTCCGCATC  66 28
TspCOW1_20080 2171338 .. 2171363 +  -3.9  -2.78816   CATTGCAGCGAATGG         GCCACTGACACG GCA CGCG-CACTGGC         TATACTCCGGGATAC  43 146
TspCOW1_20090 NONE
TspCOW1_20100 2172608 .. 2172621 +  -8.1  -3.30771   ATTTTTATTTCTGTC               CCTGC CAGA GCAGG                TTGTAGCCGATCTCG  59 64
TspCOW1_20130 NONE
TspCOW1_20140 2174316 .. 2174329 +  -3.1  -3.05816   GTCCCCCGCCCGGCT               CCG-GT TCA ACGCGG               TTGCGTCCGGCCTCC  42 48
TspCOW1_20200 2182768 .. 2182795 +  -6.2  -3.50853   GCAGAAGGCCATATA        CTGCTGTC-GGGC CTC GCCCTGATGGCCG        TTGTCGTTGGCCCAG  56 132
TspCOW1_20230 2184711 .. 2184723 +  -9.1  -3.14132   CCCGCACAATTCATG                GCGCT GAA AGCGC                TTGATGACCGCACCG  59 195
TspCOW1_20250 2186950 .. 2186975 +  -8.9  -3.04144   TGCTGCGCCGCCCGC         GCGCGGCC-GCC GGG GCCTGGCCGTGC         TGTTCCGCCTGCGCG  55 204
TspCOW1_20270 2189069 .. 2189118 + -19.3  -3.49618   TAGACCTTCCACAAA GGGGACAGCGACAACAGGCGCGG ATGC CCGTGCCTGTTGTCGCCCTCTCA TTCATTGTCTCGCGC 100 38
TspCOW1_20280 NONE
TspCOW1_20290 2191094 .. 2191104 +  -5.4  -3.31983   CACCGCTGGCACAAC                 TCAG GTT CTGA                 TTGATATGATCTGTG  51 48
TspCOW1_20300 2191811 .. 2191836 +  -4.8  -2.75382   CCGAGGCGGATGCAT        TCA-TCCAGCGG ATGT CCGC-GGACTGA         TCCTTCCATCCGGTC  44 0
TspCOW1_20310 NONE
TspCOW1_20320 2193891 .. 2193902 +  -7.2  -2.89564   CAATTGGACTCACAG                CGGC ATCC GCCG                 TATCTGGCCTGACGC  53 2
TspCOW1_20330 2194825 .. 2194846 + -14.5  -3.09933   GACTCAAAAAAAAAA           GATCACCGC CTGA GCGGTGATC            TTCGCTGGCTTGCAC  83 66
TspCOW1_20360 2197195 .. 2197208 +  -5.9  -3.01422   AGGGCGGACAGCAGC               CGGGG CAGT CCCTG                TAATTTCTCCCGATC  48 40
TspCOW1_20370 2198842 .. 2198878 +  -4.1  -3.53811   CCCTGGGCAATATCG    CAGCCGGCCTCGCGCAG AAA CTGCGCCTGGTATGCCG    TTTCCACGCCCTCGG  51 489
TspCOW1_20410 2205394 .. 2205404 +  -2.4  -3.27951   GCAAGACCTACAAGG                 AGGC ATT GCCA                 TGTTGTCATGGGCTG  44 143
TspCOW1_20420 2205694 .. 2205712 +  -4.5  -2.54999   ATTTACAGGCGCTCA             ACCGATC CGCCT GATCGGC             ATTGATCCCTTTGAT  43 145
TspCOW1_20430 2207474 .. 2207495 +  -2.1  -3.70902   TGCAGAGTGTGTTTG           CCGGGCTCG AGTT CGACGCTGG            TTTCGGTCTGCCCGC  51 283
TspCOW1_20450 2208866 .. 2208876 +  -2.4   -3.8647   ACACTTCGGGCACCC                 GGCG CGC CACC                 TTTCATCTGATCGGT  53 41
TspCOW1_20460 2209693 .. 2209719 +  -2.3  -3.89346   ACCCGCTGGCCACCG        GC-TGC-CTGCTC AAC GACCAGCGCATGC        TTTCTGCCGTAGCGG  54 67
TspCOW1_20480 2211704 .. 2211749 +  -8.1  -3.55444   CTCCGCGCCGGGTTC GGCCGGCGCGGCGTCCCGTC CATCACC GCCGGGG-GCGGCTTCGGCC TTTCCGGCCTCGGCC  60 357
TspCOW1_20570 2218987 .. 2219005 +  -3.8  -4.08144   GGGAACAGCTCGAGA             TCGGCA GACTCCA TGCCGG             TTTCTCATTACTGCC  60 489
TspCOW1_20580 2220908 .. 2220922 +  -4.2  -3.80625   TGAAGCTGATTCTCA               GTTGTC ACC GACCAC               TTTCAATTGTCACGA  57 403
TspCOW1_20640 2225193 .. 2225234 + -12.4  -3.84514   AATAATCGAGAACAA GGGGTCGATGACCAATGAC ATCGC GACATTG-TCACCGACCCC TTTACTCATTAACGT  83 152
TspCOW1_20670 NONE
       pcm_3 NONE
TspCOW1_20690 2233034 .. 2233044 +  -4.6  -4.83615   ACCGCGGCGTTTAAC                 GCGC TTC GTGC                 TTTTTGTCCCGCCTG  76 102
TspCOW1_20700 2234610 .. 2234666 +  -8.6  -2.71791   CGGCGCAGGCCGGAA TCCAGTAGCCGCCG-CCGGTCGTGG ATCCCGGC CTGCGCCGGGATGGCGGCAGCTGGA ATTTCGCGCACGCGT  58 102
TspCOW1_20710 2235266 .. 2235294 + -14.5  -3.05463   CAGCCTCAAGTAGGA        TGGGTGGAGGCGC GGT GCGCCGCAACCCA        TTGCCTGCAGGCCGT  83 28
        lpxL NONE
TspCOW1_20740 NONE
TspCOW1_20750 2240700 .. 2240727 +  -6.2  -3.28712   TGGAGTGAAGCGAAA        CCCATCGCCGCGC GCG GC-CTGAGATGGG        TTATGGCGCAAGCGC  54 158
TspCOW1_20850 2251694 .. 2251749 + -13.1  -5.26316   CCCGTCTGCATACTC CATCGCCGGCCCCGCCGCGGGCCGACC GGCA GCGCGGCCCGCA-CGGCGCCGG-GCTG TTTTTTATGGAATAA 100 348
TspCOW1_20860 NONE
TspCOW1_20870 2253227 .. 2253243 + -10.8  -5.86061   CGCGGAGACAGAAAA              CGGGCC CTCGC GGCCCG              TTTTTTTTGATGACG 100 53
        cutA NONE
TspCOW1_20920 2259608 .. 2259621 +  -3.7  -3.94773   GATCTGAATACAGAT               CCCGC CACT GCGGA                TTCATTTTTTCAATC  60 183
TspCOW1_21040 2276400 .. 2276412 +  -5.5   -3.1552   AAGCGCTCGCACAAG                GCGGT CAA ACTGC                TGTTCATGCGTGCCA  49 413
TspCOW1_21150 2285441 .. 2285452 +  -5.8  -4.24123   GATTGACATGCTGCA                CCTC ATCC GAGG                 TTTTAGGCTTATTCG  69 223
TspCOW1_21240 NONE
TspCOW1_21250 NONE
TspCOW1_21260 2296482 .. 2296521 + -10.8  -2.54523   ACCCGACTTGCCGTG  GGTGTGTCGGGTTACGCCT TGC AGGC-TAACCCGACCTACA  TCACTTCAGCTCTCC  62 113
TspCOW1_21300 NONE
TspCOW1_21310 2300310 .. 2300356 + -10.9  -3.14132   GGTTGGGCTGAACAG GGTGAAGCCCAACAAT-GGCTC GCCC GGGCCGGGTGTTGGGCTTCGCG TTGCTCAGCCCAACC  69 157
TspCOW1_21350 NONE
TspCOW1_21360 NONE
TspCOW1_21370 NONE
TspCOW1_21380 NONE
TspCOW1_21390 NONE
TspCOW1_21400 2310124 .. 2310139 +  -3.2  -3.82807   TGATATGATATTTCT              GTCAGC CATG GCTTAC               TTGTTGATCTGTTAT  55 170
       omp_1 NONE
TspCOW1_21500 NONE
TspCOW1_21510 NONE
TspCOW1_21520 NONE
TspCOW1_21530 NONE
TspCOW1_21540 NONE
TspCOW1_21550 NONE
TspCOW1_21560 2321405 .. 2321416 +  -5.8  -4.08767   GGCTTCTCTGGAACG                CGTG GAAG CACG                 TTTTCGCGGGGTCCA  64 99
TspCOW1_21570 2322736 .. 2322752 + -10.8  -5.37043   CTCTCTCCCCCACCA              GCCGGC CTTGA GCCGGC              TTTTTTGTGTCCGGT 100 48
TspCOW1_21580 NONE
TspCOW1_21590 NONE
TspCOW1_21600 NONE
TspCOW1_21610 NONE
TspCOW1_21620 2325579 .. 2325596 +  -5.5  -3.07816   TGCCGTCTCACCCCA             CGGGTCG GCGA TGATCCG              TTGGATCAGTCCCAG  47 516
TspCOW1_21690 2328343 .. 2328373 +  -5.4  -2.63913   TCCCACATCGCTCCG      CCCCGCACGTCAG TCCGGC CTGGC-TCCGGGG       TAATATCCGCTGATC  46 225
TspCOW1_21700 2329070 .. 2329081 +  -2.2  -3.36878   GATGTCAAATTCAGC                TGGT AACG ACCG                 TTGTCAGTCAGTACC  46 391
TspCOW1_21780 2337965 .. 2337982 +  -7.7  -3.35679   GAGATCCTGCCCTCG             CGCGC-CA GCT TGAGCGCG             TTCTCGGTCAGCGCC  59 221
TspCOW1_21810 NONE
TspCOW1_21820 2344951 .. 2344987 + -19.5  -2.87647   TATGTGGGATTAAAA    CGTAGGTTGGGCTGAGC AAC GCGAAGCCCAACCTACG    TCTCGTATAGTGCCT 100 338
TspCOW1_21840 2347306 .. 2347318 +  -2.6  -3.33737   ACGCAAAGGCGCAGA                GGTC ACAAG GGCC                TTCTCAAAATTCCTC  46 70
        thiG NONE
        corA 2349649 .. 2349679 +  -4.1  -4.53303   TTACAGGGCTTCCCC      TCA-GCCCTGG-AAC CTA GTTACCAGGACCTGA      TTTTATATACACATC  68 392
        trmB 2351945 .. 2351968 +    -3  -3.00797   GGTCTGCGGAGCCCG          TCCCGG-GCCC GAG GGGCGCCCGAA          ATTTATCAATTTAGA  42 114
TspCOW1_21890 2352973 .. 2352991 + -13.1   -4.8048   ATCGCAACACGCAAA             CCCCCGG CTGGT CCGGGGG             TTTTTGCTGTAGGAC 100 52
TspCOW1_21900 2354497 .. 2354535 + -20.5  -2.70932   TACCGGCATCCAGGG  GTAGGTCGGGTTGCGCCC TGCC GGGC-TAACCCGACCTAC   TGCTTGCGCAGGACG 100 51
TspCOW1_21910 2356125 .. 2356141 +  -2.2  -3.29471   GCAACCGGCGCAATT              CCTGTG GCTCA TGCAGG              TTGATGTCATAGAGC  44 453
        ctaA 2357434 .. 2357453 +  -2.1  -3.35867   CACCGCCGGCGGCAC            TGCTGGA CAAAAT TCCACCA             TTGCTTCACCCTTGA  46 52
TspCOW1_21940 NONE
TspCOW1_21950 2359120 .. 2359132 +  -6.9  -3.20991   TGGGTTACCGGCCTG                CCGGC TGG GCTGG                TTCGCTTGCCTTGCC  56 362
TspCOW1_22050 2373803 .. 2373827 + -17.2  -5.61596   CCTCTCCCTGCCTTA          TCCCCTCCCG TCCTC CGGGAGGGGA          TTTTTTTGTGCGCCT 100 112
TspCOW1_22060 2374846 .. 2374869 +    -3  -3.33696   CGATGTGGCCGAAAC          GGTCCGGAAC GGAG GATTCTGACC           TTCGTTCACAGGGGA  47 4
TspCOW1_22070 2376004 .. 2376032 +  -5.1  -3.17763   CGATGGCAAAGCCGA        CGTCGGCCTGG GACAGGG CCGGGGCGTCG        TTGATGCCGTCTCCC  49 485
TspCOW1_22090 2378702 .. 2378730 +  -7.3  -3.14931   GACCGGCGGGGAGTA        GGATGGGTGGAGC GCA GCGCAACCCATCA        TTGATCCCGCATCGG  54 25
TspCOW1_22100 NONE
TspCOW1_22110 2379966 .. 2379996 + -25.6  -3.85698   GATGAGAACGCAAAA       GAAACGGGCGGGGT ACA ACCCCGCCCGTTTC       TTTGTACAGCCGGGC 100 47
      purE-1 NONE
        purK 2403172 .. 2403222 +  -3.2  -3.12351   AACGGATCCGTGAAG CGTTAAGCGTTAAGCGTTAAGCGT TAA GCGTTAAGCGTTAAGCGTTAAGCG TTAAGTATCGCAGGA  43 6
TspCOW1_22360 2404371 .. 2404404 +  -4.5  -3.79906   CTTTGCGCCTCTGTA     CCCATAGGGCATAAA CGCC TTTGCGCCCTCTGCG      TTGTTATCACCATAC  59 109
TspCOW1_22370 2406013 .. 2406028 +    -6  -2.82623   AAGGCATGAAGACAC              CGCTGG TCAG CCCGCG               TCCTTGTGCCGCGGA  49 222
TspCOW1_22390 2409231 .. 2409251 +  -5.3  -2.76453   CCACGCACCGCCATG            GCGACGGTG TAC TGCCGTCCC            TGCTTGACCTTGTCG  47 192
TspCOW1_22450 2416893 .. 2416907 +  -5.8  -3.68704   ATTGATTTTCAAGTG               TCATAA AAT TTATGA               TTATTAGAATATTAT  58 196
TspCOW1_22460 2420041 .. 2420077 + -11.5  -2.74144   GGTCGGGTTAGCGCA    GCGTAACCCGACATGCC GCG GCCGCGTCGGGTTACAC    CTTTCAGGCTAACCC  66 122
TspCOW1_22470 2421090 .. 2421129 + -14.4   -2.6428   CCCGGCATTGCCCTG  GCATGTTGGGTTACGGCGC GAA GCGCC-TAACCCAACCTAC  ATTCATTCCGTGTTT  78 238
TspCOW1_22480 2422177 .. 2422189 +  -6.3  -2.58579   GCAGAACCTGTACTA                TCAGA CGA TCTGA                CTTCTGCGGCGTTAA  48 13
       moaA1 2423577 .. 2423596 +  -5.8  -3.60234   CCGCAGCGCCGATAA            TGG-CTGAT TGA ATCAGTCCA            TTTACGGGTATATCC  55 248
        pdxS NONE
        pdxT NONE
TspCOW1_22520 2425533 .. 2425553 +  -2.5  -3.65671   GCTCGGCATCGGGGA            TTTCGGC AATAAAC GCCGGGA            TTGTCTATAGTTATC  51 14
TspCOW1_22530 NONE
TspCOW1_22540 2427163 .. 2427210 +  -3.2  -3.63515   GCAGGCGACGCAGTT CTGCATCAACCGGCCCAACTGCT GCA GGCTGT-GGGCCGGATCGCCCAG TTGTTCGGCATCCAG  53 157
TspCOW1_22590 2432267 .. 2432281 +    -7  -3.10012   GCAGAAGGGCTGCAG               GCCCTG CGA CCGGGC               TTCGATGATGGCCTT  52 336
         dnr 2440554 .. 2440567 +  -3.7  -3.39842   CTCGATCAACTCGGA               CAGGC GCAT GCCCG                GTTTTATCTTCAGCT  49 223
         slt 2456038 .. 2456048 +  -6.8  -2.97365   AGAGGCCATTTTCTT                 CAGG AAC CCTG                 TGCTTATTCGTCATT  53 75
TspCOW1_22830 NONE
TspCOW1_22840 NONE
TspCOW1_22850 NONE
TspCOW1_22860 2458144 .. 2458175 +  -4.2  -2.89564   AGGGCTCACGGCCCG      GCGCGGAGCCGC-CG GCA TGAGCGGCGCCGGAC      TCTATGCCCTGGCCG  44 6
TspCOW1_22870 NONE
TspCOW1_22880 NONE
TspCOW1_22890 NONE
TspCOW1_22900 2462787 .. 2462804 +  -4.1  -3.17075   ACCGGCTCCGGCAGT             CTC-GCCA CTA TGGCAGGG             TTGCCTTGCCAAGGG  45 118
TspCOW1_22910 2463886 .. 2463919 +  -2.5  -2.58253   CGACAACCCGCGACA     TGTTGGGTTACGGT ATTGCGC ACC-TGACCCAACC     TACATTCCATTCTGT  38 116
         cca 2465611 .. 2465630 +  -2.1  -3.52805   CCGCCAATACGTAAA            TCTGACCG ACAGG CGG-CAGG            ATTATTTTTTGTTTT  47 430
        plsY 2469553 .. 2469591 + -11.6  -3.17051   TTTTGTGATTGTTCC   CCGAATGTTGGGCTTCGC GTT GCTCAGCCCAACCTACGG   TGTTGATGGTCCGCC  69 118
        rpsU NONE
TspCOW1_23010 2471603 .. 2471626 + -10.4  -3.01791   GGAACAAAAGGTAGA          TCGGGTTAGCG CAG CG-TAACCCGA          TATTGCCCGGAACGT  64 104
        dnaG 2473618 .. 2473653 + -19.1  -3.21276   GATCGTTTGATTTTT    TACCGTCGCCAAGCC CTCATC GGCTTGGCGACGGCA     TATTGTAACCCGGAG 100 96
        rpoD 2475561 .. 2475582 + -17.3   -5.7946   GCCCGCACCTCGAGA           GGCGCCACC GCAA GGTGGCGCC            TTTTTTTATTGCCCA 100 56
TspCOW1_23040 2476881 .. 2476911 +  -5.3  -4.07568   TGCGTCACTCGTGCA       CCGTCCCAGTGGT AGGCG AGCAGTGGGCCGG       TTTTGGGCAACGACA  64 119
TspCOW1_23070 2478662 .. 2478705 +    -8  -3.75629   CTCGCCACCCTGGCA GCGGGACGGC-GTTGAGCCTG CTC CAGACGCAACTGTCGCCCGGC TTTACATTCGACCTG  66 11
TspCOW1_23090 2480098 .. 2480110 +  -4.7  -3.28712   CAGCAGCGCCACGCC                GGCGG CGA CCGAC                TTCTCGCCGGCCCAG  49 394
        metH 2491479 .. 2491497 + -13.1   -5.4111   ACGGCCCAATGCGAA             GCCCGCC CTTCC GGCGGGC             TTTTTTATGGTTCTT 100 51
TspCOW1_23170 2493980 .. 2493991 +  -7.2  -2.58663   GCCTTCAACCATAGG                CCCG ATGC CGGG                 ATTATCCCAATAAAT  50 317
       cspC2 2494500 .. 2494517 + -14.1   -5.7946   GCGGCGCATGCCAAA             CCCCGCC AACC GGCGGGG              TTTTTTTATTGCCCG 100 54
TspCOW1_23200 2495145 .. 2495199 + -21.6  -2.88249   TGTCAACGCAGAGAA CGCGGAGACGCAAAGGCGCAGAGA AATTCGA TTTCATTGCCTTTGCGTCTCCGCG TCTCTGCGCACTCTG 100 58
TspCOW1_23210 2495788 .. 2495821 +  -8.2  -2.70932   TGGAGCGAACCGGTA    GGATGGG-TGCAGGCG CCTG CGCC-GCAACCCATCA     TGCTTCCGCCCGGCC  54 25
TspCOW1_23240 2498753 .. 2498784 +  -2.8  -4.59773   AGCAAGCTTCGATAA      CACAGGCCTGCGTG AGCA CACAACGGCCTGTC       TTTTTCAAAATCAGA  69 106
TspCOW1_23250 NONE
        cheC NONE
TspCOW1_23270 2501955 .. 2501968 +  -3.7  -3.64915   GGACCCGTATCGAGC               CGCTG CAAG CTGCG                TTATCATTTCTCCCA  54 50
TspCOW1_23280 NONE
TspCOW1_23290 2502658 .. 2502679 +  -8.1  -3.10715   CAAGCCCTGACGCCG           GCTGTC-GAT CTG ATCTGACAGC           TTCCCTACTACTGGC  57 31
        ycaD 2504009 .. 2504022 +  -2.3  -2.83715   CGCCACCCGCCTGAA               GCGGG AGAA TCTGC                TATCCTGCTGATGAC  39 27
TspCOW1_23310 2506141 .. 2506157 +  -7.9  -3.25823   CATCGAAATGCACCC              TGCCGCC ACG GGCGACA              TTGGTATGGAAGACG  59 305
TspCOW1_23340 2507173 .. 2507190 +  -4.7  -2.52543   GGCTGGGAACCGCTC             ACTCGCG CAGC CGCGGGA              TGAGTTGAGCCAGGT  43 5
         grx 2512014 .. 2512039 + -10.3  -2.62184   CCCGGACCATGGCCA         GGCCGATGCCG TGCC CGGGAGCGGCC          TCGTCTGCCCGCACC  57 168
TspCOW1_23440 NONE
        yadH 2516138 .. 2516167 +  -8.5  -3.40403   GCGCTGCTCAGACCA       TCGTCGTGCCCGCC CCG GGTGCGC-CGGCGA       TTCTCATCGCAGGGC  64 51
TspCOW1_23470 2517046 .. 2517073 +  -3.2  -4.14739   GGGACCGAGGAAGCG        TCCGGACTGACG GATG CGGATGTCCGGG         TTTTCCAGTGACTCC  60 523
        hisB NONE
       hisH1 2524369 .. 2524382 +  -2.3  -3.53563   GGGATGGAAACTGAA               GGAAC GACT GTGCC                TTTACACCGCGGTCT  47 27
        hisA NONE
        hisF 2526278 .. 2526292 +  -2.1  -2.85351   CGAGGGCATCGAGGT              G-AGGC TGTA GCCTGC               TCTAATATCGGCAGA  39 16
        hisI NONE
        hisE 2527202 .. 2527225 +    -3  -3.79906   AAGTAAGGTTGGATC          ATCAGCGCCGC TGA GCGGCGG-GAG          TTATTATGGGAATCA  55 35
        tatA 2527517 .. 2527533 +    -3  -3.84712   ACACCTGAACCCCGC             CAT-GCG TCCG CGCCATG              TTTGATATCGGCTTC  55 84
TspCOW1_23620 NONE
        tatC 2529190 .. 2529202 +  -9.1  -3.16676   CGCACAGCCTCGCCG                CCCTG CTT CAGGG                TATTGAATTCCTCGA  59 435
        engB 2541553 .. 2541566 +  -6.7  -3.06183   GAAATCCTGTTGGCT               GCCAT GAAT ATGGC                TTGGGTACACATGCA  52 202
TspCOW1_23760 2545568 .. 2545581 +  -2.3  -2.78384   TGCGCAGGAACGCGA               GATCC TGCT GGAAC                TCTGATCCGCCACCA  39 7
TspCOW1_23770 2546020 .. 2546048 +  -2.4  -3.37975   CAGGATGGGTGAAGG       CGTATGCGCCG CAACCCAT CGGAGCAT-CG        TTATCCATGATGGGT  46 68
TspCOW1_23780 NONE
TspCOW1_23790 2548090 .. 2548118 +  -2.9  -4.07568   TGGTGTACGGCTAGC        CAGCGGCGGCG CCTTCAA CGCCTCAGCGG        TTTTGAACAACCCGG  58 27
TspCOW1_23800 2549113 .. 2549160 + -10.6  -2.58677   CGTAACCCGACAGTG GCCGGCATGTTGGGTTACGGTGC CAT GCACC-TAACCCAACCTACACGC ATTAATCATTCTCTG  62 133
         def 2555077 .. 2555089 +  -4.7  -2.62983   AGCAGCCCGGTGAAG                CAGGC CGA GCCGG                TCATCTGACCCTGCG  43 5
         fmt NONE
        rsmB NONE
TspCOW1_23880 NONE
TspCOW1_23890 2560208 .. 2560220 +  -2.6  -3.46602   CGGCATAGGCAGCGG                CCGC ATCAA GTGG                TTATACTCTAGGGCC  46 33
        ntrX 2561805 .. 2561828 +  -2.4  -4.46212   AACTCGCACCTGTGG          CAAG-CGCCTA TCC TGCGCGCCTTG          TTTTCTGCTCCACGA  64 178
        trkA NONE
TspCOW1_23920 NONE
TspCOW1_23930 2565202 .. 2565212 +  -2.4  -2.62184   CAGAATGGTCGGCAC                 CCCG AGG CCGG                 TGGTGTAGAGGAAGA  38 122
       nhaP2 NONE
TspCOW1_23960 2568527 .. 2568541 +  -2.1  -3.37975   CAGCACCCTCATCAC              GA-CCG GCCA CGGATC               TTCTCCCTGATGCCT  46 1
TspCOW1_23970 2569111 .. 2569124 +  -2.3  -3.72576   CTGCATCAGGACCAC               GGCGT TGTT GTGCC                TTTCATCGCGCGCAG  51 71
TspCOW1_24010 2571734 .. 2571748 +  -5.6  -3.06796   AGCAGTGCTGAACCG               TCAGCC GCC GGCGGA               TTGACTCGGCTCCGG  49 30
TspCOW1_24020 2572561 .. 2572580 +   -15  -4.19735   ATCCGGGAGTACAAG            GACCCGCG CTTG CGCGGGTC             TTTCCTTTTCAGGAG 100 53
TspCOW1_24030 2573908 .. 2573924 +  -2.1  -2.64912   GCCACCGACAGTTTC              GCCGACA AGC TGGGGGC              CTTCTGAGTTGGAGG  38 2
         dtd 2574623 .. 2574658 +  -2.4  -2.59039   CCTGCGCCGCCAGCC    CTGCAGC-AGGGCAC AGTCGTC GCGCCCGCGCAGCAG    CTTCTCCAGGTCCTT  38 126
TspCOW1_t00340 2574979 .. 2574991 +  -4.7  -3.14132   TGCGCGGTTTGTCCT                CGCGC CGG GCCCG                TTCCTCGCGCCAGGC  47 176
        prlC NONE
TspCOW1_24080 2579838 .. 2579864 +  -2.3  -2.77233   ACGCTCCGCGTTTTT        GTCCCG-CA-TCC GCG GGAATGACGGTAC        CTTTACAGCTTGTAG  39 5
        ubiD 2581529 .. 2581562 +  -8.9  -3.43492   CCGACGTCTGCCGCC     GCATGTCGGGTTACGC TGC GC-TAACCCGACCTAC     TTCTGCTGCATCTCC  64 86
TspCOW1_24110 2584054 .. 2584086 +  -6.3  -2.72379   ATCGCCAGCCGGCCG     GCGGCCTGCAGCAGC ACCGG GTTGC-GC-GGCTGC     TCCTTGAGCCATTCC  47 524
TspCOW1_24160 2588713 .. 2588726 +  -8.1  -3.62597   GCCGATGCCGGAAAC               GGGCT GGAC AGCCC                TTATTCCGGCCTACA  62 149
        argH 2592453 .. 2592489 + -12.1  -3.21276   ATGCGGCAGCCCAGC    TGGCGGATGCGGCCGAG GAA CTCGGCCGCCAGCGACA    TGTTCTCGCAGGCCG  69 373
TspCOW1_24220 2596125 .. 2596141 +  -2.9  -2.62184   ACATTCCGGGACACA              CGGATGT CAA ATTTCCG              TCATCTGACACGCCC  40 98
TspCOW1_24230 NONE
        cyaA 2600228 .. 2600240 +  -6.3  -3.40403   TGCCAGCGTGACACT                TCTGT CGT ACAGA                TTGTCATAGGCCAGG  55 433
TspCOW1_24260 2601396 .. 2601412 +  -7.2  -3.36273   CGAGCATTGGCAACC              GGCGTG AAAAA CGCGCC              TTGATCTTGCGCCAG  56 342
TspCOW1_24310 NONE
        lysA 2605649 .. 2605660 +  -5.8  -3.14132   CCATTCACACTTTCC                TGCC TGGG GGCA                 TTCGTGAAGCCCGCG  49 112
TspCOW1_24330 2606775 .. 2606799 +  -3.4  -3.61103   GTCAGCACCGAACCG         GCCTGACGCGG ACAA CCG-GACCGGC          TTTGAGGTAAGCTTG  49 20
        dapF NONE
TspCOW1_24350 NONE
        xerC 2609331 .. 2609376 +  -4.5  -3.04144   CCCATCATTCCCTGT GCCAGGCGATGGGTTATGGCGC GTG GCGCCTCCACCCATC-CTACGC TCTTACAACTGGGGC  47 67
        hslV NONE
        hslU 2611533 .. 2611578 +    -9  -2.61216   TCATTGCGAGCGCAG CGTGGCAATCTCGTACCG CAGAATCAAC CGGTTGGGGATTGCCGCG TCACTTCGTTCCTCG  57 101
TspCOW1_24390 2612272 .. 2612311 + -12.2  -3.16117   AGGACGGATGGCCAC  GGGGCGTCGGATTACGCCC TTC GGGC-TAATCCGACCTACC  TGTTGCATTGAATCT  73 138
TspCOW1_24410 2613614 .. 2613632 +  -4.4  -3.20382   ATAATCACGAGGAGA             CGGCATGG ATA CCCTGCAG             TTCATCGATATCAAC  49 37
TspCOW1_24420 NONE
        ubiE NONE
TspCOW1_24440 NONE
TspCOW1_24450 2617760 .. 2617800 +  -5.4  -2.52464   CAACACGTTGCAGCC GCG-GCCTGTCGGGTTACGC TGC GC-TAACCCGACCTACACGC TGCGTTACAGACGCA  45 98
        ubiB 2619577 .. 2619614 + -16.4  -2.74144   GGTCGGGTTAGCACA   GCGTAACCCGACAGGC CACGGC GATTGTCGGGTTACGC    CTTTCAGGCTAACCC  86 81
TspCOW1_24530 NONE
TspCOW1_24540 NONE
TspCOW1_24550 NONE
        secB NONE
        gpsA 2628320 .. 2628333 +  -5.9  -2.57468   CGGGAAGTCTGCGCC               TGGGC CTCG GCCCG                CTTGATGTCCTCGGG  46 92
        glnK NONE
        amtB NONE
TspCOW1_24630 2633741 .. 2633760 + -16.4  -5.67063   TCAACCCCGGACCGA            CGGGCGCC TCAT GGCGCCCG             TTTTTTTATGATCAG 100 51
        tsaC 2634591 .. 2634603 +  -4.1  -4.18494   GGCACGAGCCACATG                GCATG AAA TATGC                TTTTGCCTGGCGATG  62 49
TspCOW1_24650 2635791 .. 2635818 +  -7.6  -3.01712   GCACAACGGGTAGGA        TGGGTGGAGGCG CTTG CGCCGTAACCCA         TCTTACGACCCGCCG  56 85
        hemF NONE
       rubA2 2637335 .. 2637347 +  -4.7  -3.19175   CTCACCACGTCGGCG                GCCGC CCA GCGGG                TTCGGTGTGTTCGGG  47 229
        hemB NONE
        aroE 2640923 .. 2640940 +  -9.1  -3.27525   GGCAGCAAACATGGC             GCCG-GCC CCC GGCACGGC             TTCGATTTGAACAGG  63 44
TspCOW1_24780 NONE
TspCOW1_24790 2649067 .. 2649101 + -11.5  -3.01924   TGTCCGTGTCGGTTG    CGCCGCTGGCGC-GC ACCTGAC GCAGCGCCAGCG-CG    TATTCGCGCAGGATG  65 472
TspCOW1_24820 2650505 .. 2650521 + -11.5  -2.73681   ACTGCAGCAACCGCT              CGGCGGC GGC GTCGCCG              TGGTTGGGATCGATA  62 426
TspCOW1_24890 2659409 .. 2659426 +  -5.5  -3.01712   CGGGTCCCGGGCCGA             GACGTCT TCGA AGCCGTC              TATTCCCGCGGCGCA  47 465
TspCOW1_24910 NONE
TspCOW1_24920 NONE
TspCOW1_24930 2661970 .. 2662004 +  -6.6  -4.96848   GCAATTCAAATAAAA     TTCTCTAAACTTCC TAAATAT GGAAGTTTGTAGAA     TTTTTATGTGCAGAC  86 337
TspCOW1_24950 NONE
TspCOW1_24960 2663746 .. 2663765 +  -2.8  -3.67597   CCTGCAGGTTGGACT            TGAGCTTT TCCA ATAGCTCG             TTGTTGGGTGCGACG  53 265
TspCOW1_25140 NONE
TspCOW1_25150 2682869 .. 2682884 +  -3.4   -3.6796   CCCTGAATATCAATA              TTTATA TTTA TATAAA               TTATTGGAGTCTATT  52 35
TspCOW1_25160 NONE
        tgpA 2686024 .. 2686036 +  -6.2  -3.64703   CGAGGCCCTGCGCCG                GGCG GTGCG CGCC                TTTCGCTAGGGCGGC  61 4
        slyD 2686659 .. 2686693 + -14.3  -3.88498   ACGAGCATTAATACC    GTCTGCTGACCGCCCC GCCC GGGGCGGTCA-CGGCC     TTTCCTGTCTCCCCA 100 30
        dnaA 2694514 .. 2694533 +  -4.8  -3.37796   TCCGCACACAGGCTC            CCGAGGGG TTGT CCGCCCGG             TTGTGGCTAATAACA  51 97
        dnaN 2695742 .. 2695773 +  -4.2  -3.02471   GAACCGCTACGTGGT      CATGCCGATGCGGC TGTA GCCGCAACGGTGCC       TGTCTGTGCTCCCGA  45 7
        recF NONE
        gyrB 2699494 .. 2699510 +    -5  -2.88663   CCTCGGCCAGGATCT              CGGCCG CTGCC CTGCCG              TCTGTGGCAATGGGT  44 158
TspCOW1_25350 NONE
TspCOW1_25360 NONE
TspCOW1_25370 2706558 .. 2706568 +  -2.4   -4.1399   CGCAAAGGCGCAGAG                 GCGC AAA GCGA                 TTTATATGTAAATGA  59 64
TspCOW1_25380 2707920 .. 2707930 +  -2.4  -4.62872   ATGCACTATACTGGT                 GCGG GAG CGGC                 TTTTTGCGCATTGAT  66 42
TspCOW1_25390 2709570 .. 2709590 +   -14  -5.63517   TGACGCATGCAATCA            CCCCGCTC CTCAT GAGCGGGG            TTTTTTGTTTGAGGA 100 53
TspCOW1_25400 2710760 .. 2710782 + -11.2  -5.08601   GCGACATGACAGTGA           ACCCCGCTCG ATA TGAGCGGGGA           TTTTTATTGAACTGA 100 94
TspCOW1_25410 2711478 .. 2711491 +  -4.5  -4.65895   CGCACTGACCACACG               GCCTT TTAC AGGGC                TTTTTCGCTCGGCAA  72 112
        ntrB NONE
        ntrC 2714202 .. 2714236 +  -9.3  -3.33671   CGTTTGGGTATGATC    GTCATTG-CGAGGCGC AATA GCGCCGCGGCAATCAC     TTGTCGGATGAGTCT  67 103
        yibK 2729874 .. 2729904 +  -6.9  -2.62184   CGCTGGAGGGCAATG      CGGGCAT-CGGCATG GAG CA-GCCGCATGCCGG      TCGTGTCCAGAAACA  47 494
         rep 2735301 .. 2735315 +  -3.5  -3.03124   CAATCTGAAATCGAT               GCTGT CCTGA GCAGC               TGTTCCGCCGTCCGA  43 16
TspCOW1_25640 2736083 .. 2736107 +   -15  -5.52384   CCGGGCATGAAAAAA         CCCCGCCGCGG TCAC CCG-GGCGGGG          TTTTTTTCATGCCCG 100 43
TspCOW1_25660 NONE
TspCOW1_25670 2737725 .. 2737735 +  -2.4  -3.61103   CGATTCGCGCAGCGA                 AGGC AAG GCCA                 TTTAACATGGCCTTG  47 124
TspCOW1_t00360 2737964 .. 2738010 +  -7.1  -3.14132   CGCCAATTCCATTGC CGCACCCTCGCG-ATTCCCGGC CCCT GCGGGGCGTTCGCCGGGCTGCG TTCGTCCCCCCGGAC  54 36
       omp_2 2743276 .. 2743297 +  -2.2  -4.60041   GCGTCTCGATGCCTG           CGCAGTCGG GAAAG CCGAG-GCG           TTTTTCCGCCTGAGT  70 292
TspCOW1_25720 2745003 .. 2745016 +  -3.1  -3.92143   GGGCTAACCCAACCT               G-CCTG CTA CAGGGC               TTTGTCCGGGTTTTC  55 150
TspCOW1_25740 NONE
TspCOW1_25750 NONE
TspCOW1_25760 2748333 .. 2748346 +  -3.1  -3.61398   ATGATTGTAATTCAC               TGCTGC TTT GC-GCA               TTCTTGCGCCAGAGG  49 78
TspCOW1_25770 NONE
TspCOW1_25780 2750455 .. 2750469 +  -7.8  -3.14344   GTCTACGATAAGACA               GGCTTC GTA GAGGCC               TTCCTGGCGGCCGTC  54 206
TspCOW1_25810 2754584 .. 2754604 +  -2.5  -2.97735   CGTCTCTAGGCGCGG           CC-GCGCG ATAGGG CGCGTAGG            TGTAGTATTTCGGTC  40 32
TspCOW1_25850 2757019 .. 2757032 +  -5.9   -3.6806   TCCTCTAGTTCATGG               CTGCC GGTC GGCGG                TTTCCATCAGTGTCT  58 33
TspCOW1_25890 2759481 .. 2759502 +  -2.1  -2.71712   GCCGCCCGTCCGGCA           CTGCTCGAC CAGC GTCATGCGG            ATTTCCCCACGGCCG  38 226
TspCOW1_25980 2769784 .. 2769835 + -10.1   -2.5194   GTGCCTGAGTAAAAA AGGCCGCCCCCGGTGCAG-TGCC TGTGACTC GGCAGCTAC-CCGGGGGCGACCC GTTGATCAGTCATTA  62 470
TspCOW1_26050 NONE
TspCOW1_26060 NONE
TspCOW1_26070 NONE
TspCOW1_26080 2780543 .. 2780553 +  -2.4  -3.87627   GGCGCTGACCGATCC                 CCCG GCC CTGG                 TATTTTGTATCAACG  53 203
        uvrD 2784339 .. 2784367 + -14.5  -2.67973   TCCCCCCTAACCCCT        GCCCCTCTCCCCC TGA GGGGGAGAGGGAA        TGATATGGGTTGTCT  78 48
TspCOW1_26110 2785075 .. 2785122 + -14.2  -3.32844   GCGAGGCGCGTAGCG CCGCGGCAATCTCGT-CCGGCGT GCT ATGGCGTTACGAGATTGCCGCGC TTCTCGCATAGAAGC  87 71
TspCOW1_26130 2789527 .. 2789551 +  -6.5  -3.53224   CACGCGCTGCTGAGG          CGGTTCATA ACATTTG TATGAGCCG          TTTCAGCGGCGGGTC  58 28
TspCOW1_26140 NONE
TspCOW1_26150 2791225 .. 2791262 +  -6.9  -3.17392   TGCAGGCGCTTTGCG   CCGTAACCCTTCAGGGC AGAC GGCATGATGGGTTACGC    TTCGCTTCACCCATC  56 115
        speA NONE
TspCOW1_26180 NONE
TspCOW1_26190 2795618 .. 2795629 +  -5.8  -2.70932   CTTGCTCATGGTGCG                CCTC CTTC GAGG                 TCGTTGCGGGGCGGG  47 268
TspCOW1_26290 2808063 .. 2808078 +    -6  -2.91429   GCACCAGCGCCTGGC              CGCCGC GATG GCGGGG               TGATTCCTTTGCTGT  51 7
TspCOW1_26300 2809818 .. 2809831 +  -8.1  -2.75481   AGTCGCCGCTGCCGC               TGCCG AAGA CGGCA                TAGTTGCCGTTGACG  51 508
        mrcA 2832834 .. 2832844 +  -4.6  -3.78934   ATCCGCAGGCCGAAA                 CGGT TGA GCCG                 TTGTTCTAGAACAGG  56 6
TspCOW1_26470 2833963 .. 2833982 +  -2.8  -3.66732   GCGTGCCACGGAAGA            TGAAC-GGG AAG CCCAGTACA            TTGTTCACCTGGTTG  53 474
        rimO 2839698 .. 2839736 + -16.1  -2.55213   GGACATAATACTATC  AG-TCTGCTGCCCTGGCGC TGC GCGCC-GGGCAGCAGAACA  TGCGTTGCATGCATG  84 75
TspCOW1_26610 2846114 .. 2846124 +  -2.6  -3.19602   GCTGATAATGCAAGA                 TTTT TGT AAAA                 TATTAATGTCAACAA  44 287
         gmk 2846770 .. 2846785 +  -8.2  -2.55015   CATGATCGCCGACCT              GCTGGC ACCC GCCGGC               TGAATTGGGTAGACT  53 7
TspCOW1_26630 2847175 .. 2847200 + -10.3  -2.58714   CCTATGATCCGAAGG         CCGGTCTGCGC CTGC GCGCTTACCGG          TGGGTTCGTATGACA  62 90
        spoT 2849443 .. 2849490 +   -10  -3.06183   GTCATTGCGAGCGAA GCGCGGCAATCTCCTGATGCGC AGGAAA GC-CGGTAG-AGATTGCCGCGC TTCGCTCGCAATGAC  66 58
TspCOW1_26650 2850027 .. 2850037 +  -3.2  -2.78384   GTCTGGCAGGAGCCA                 TTGC GCT GCAG                 TCTGATCGCAAGCGG  41 136
        recG 2852310 .. 2852334 +  -2.7  -3.28791   CATGCGATAATCCCC          GGTCTTTGGTC CGA GTCCTGAGATC          TTGTCCCACCCGCGT  44 71
        ubiC 2852914 .. 2852930 +  -2.2  -2.62263   TAGGTTGGGTGAAAC              CTGGTG CAACC CATCGG              TACTGTCCGGGCGAT  38 38
        ubiA 2853893 .. 2853917 +  -8.5  -2.82036   CGGGTGATGTCGCCG          GAACCGCCAGG GCG CCTTGGGGTTC          ATTTCGATGCTGTGT  58 34
TspCOW1_26690 2854366 .. 2854400 +  -2.8  -3.05384   CTTTCCGCTGGCAGG    GGGCTGATG-CGTCGC TTCCT GCTCCGTCATC-GCCC    TTCGGTCAGCCGCCG  43 19
TspCOW1_26700 NONE
TspCOW1_26710 2856156 .. 2856188 + -13.4  -3.54424   GGTGTCGGTGCAGCG     CAGCCGC-CGGCAGC GTCG GCTGTCGAGCGGCAG      TTTCAGGCCGTGGGC  77 239
TspCOW1_26730 NONE
        bioB NONE
        bioF NONE
        bioH NONE
        bioC NONE
        bioD 2861908 .. 2861926 +  -6.1  -3.50449   ATCCGGGCGCCGCAA             TATTAGC GAAGA GCTAATA             TTATAAATTTATAAT  58 192
TspCOW1_26790 NONE
        coxB NONE
        coxA 2865511 .. 2865554 +  -3.7  -4.52589   CGCAGCAACATCCGT CTGGCGTTGATCC-TGGCGC TGATC GCGCTGGGGGTCTTCGTCGG TTTTGTCTGGACCAC  68 123
        ctaG NONE
        cox3 2867465 .. 2867479 +  -3.4  -3.83026   CATGGAATGAAGGCG               CCCTGT ATA GCCGGG               TTTGATGTAAGCCAG  55 377
TspCOW1_26850 NONE
TspCOW1_26860 NONE
        cyoE 2870194 .. 2870204 +  -4.6  -3.05384   CGATACTGGAGCCTA                 GCGT TCT GCGC                 TTGGATCAGGGCGCA  47 320
TspCOW1_26880 NONE
       fixO2 NONE
TspCOW1_26900 NONE
        fixP 2873761 .. 2873817 + -14.5  -3.36878   GGCAGTAGCATCCGA TGAT-GCATCCGGCCGGCCGGC-GGCGG ACAG CCGTCAGCCGGG-GGCCGGGAGCCATCA TTATCCGTCCATGAC  87 33
        rdxB NONE
TspCOW1_26930 2876069 .. 2876092 +  -4.6  -2.73364   GCCCCGGAGAGTCCC          TG-AGACAGGC GTT GCCTGTATCCA          TCCTTCCGATAGCGC  44 23
TspCOW1_26940 2878931 .. 2878985 +  -9.4  -3.32698   GGAATCGGGAGTATT GCATGATAGATGGAATCCGCACTATT ACC AATAATACGGATTCCGTCTAACACAC TGTTATATGCCATGA  66 372
TspCOW1_26950 2879351 .. 2879375 +  -3.4  -3.50447   TGCTCCCTTCGGTCG         CCGGACGCTCC TGAC GTCGCG-CCGG          TTATGTGAGCGTTAG  49 56
TspCOW1_26960 NONE
TspCOW1_26970 2880995 .. 2881013 +    -3  -3.91144   CACTAGGACGTCAAA             CACTTCGC TGC GCTACGTG             TTTGTCGCCTGTGAG  55 63
TspCOW1_26980 2881617 .. 2881633 +  -2.3  -2.50935   CCGTAAGGTAAAAGA              ATTAAGT GAA ACTTAAC              GTTAATAACTCCCCT  38 119
TspCOW1_26990 2881954 .. 2881965 +  -4.4  -3.20991   ACAATGCCATGCACC                GGAT AAAA ATCC                 TTCGCTTCGCTTCGG  49 52
TspCOW1_27000 2882558 .. 2882569 +  -4.4  -4.55004   TGTTAACACCCATAT                TGGT GGTA ACCA                 TTTATGTTTTATATT  70 191
TspCOW1_27010 2882975 .. 2882994 +   -10  -3.18199   AACAAGGCGGCTAAG            GCTGACGGC TTC GCCG-CAGC            TTGCCTTGGCCGTTA  68 48
TspCOW1_27020 2884686 .. 2884700 +  -4.3  -4.41895   TGGCTGTCAGGTCAA               GTTCA GGCGA TGAAC               TTTTCCTTCCAGATT  68 251
TspCOW1_27040 2886862 .. 2886884 + -12.7  -3.35015   CCTCGCGGCCCTCCA          CCGGACGCGC ATTC GCGCG-CCGG           TTATGCAGTCGTTAA  79 73
TspCOW1_27050 2887605 .. 2887619 +  -5.6  -3.06831   TCAGCTTGGACGCTC               CTTGCG TCG CGCCAG               TTACCTGAACGTTAG  49 61
TspCOW1_27060 2888240 .. 2888263 +  -5.3  -3.61398   GAGCAGGGCATTGGG          TGCAGCC TGAACCATGT GGCTGCA           TTATTACAGGAGCGC  55 253
TspCOW1_27070 2888886 .. 2888899 +  -3.8  -2.89191   ACGTGTCCACTATTC               GTGG GTAGGA CCAC                TGTATAAAGATATGA  44 18
TspCOW1_27080 2889607 .. 2889625 +  -8.8  -3.61398   CTGCTTCTTGTCAGT             TCGCGATC GAG GCTCGCGA             TTCTTACACCCGCCC  66 251
TspCOW1_27090 NONE
TspCOW1_27100 2890721 .. 2890736 + -11.8  -4.65263   GACAACAATAAAAAA              GCCGCC CGCA GGCGGC               TTTCTTTTGGGCGAT 100 136
TspCOW1_27120 NONE
TspCOW1_27130 2893555 .. 2893565 +  -2.4  -3.20953   TGACCTGGCGCTTTG                 ACCG GGT CGGG                 ATTTTGAGTTGTTGA  44 25
TspCOW1_27140 2893863 .. 2893884 +  -7.9  -2.80291   GCCTGATGACCGCCG           GCTGACTCC TTTC GGAGGCGGC            TATGATCAAGTGATT  54 35
TspCOW1_27150 NONE
TspCOW1_27160 NONE
TspCOW1_27170 2894792 .. 2894804 +  -7.7  -2.63644   CAATCGCCGCCAAGG                GATGG CTT CCATC                TAACTTCATGTTTTT  53 86
TspCOW1_27180 2896467 .. 2896490 + -18.2   -3.8165   TCGTATCATTACGTC          CCCGGCTACC GCCA GGTAGCCGGG           TCTTCTTTTGTTGAG 100 80
TspCOW1_27190 2897870 .. 2897880 +  -4.6  -3.60098   GTTATATATATTGGC                 GCGC TAT GTGC                 TTTAGACTGGGGCGT  53 119
TspCOW1_27200 NONE
TspCOW1_27210 NONE
TspCOW1_27220 2899948 .. 2899990 + -18.5  -2.64616   TCTTCTGATAAACTG ATCTGGCTCGGAC-CCGCCG ATTG TGGCGGCGTCCGGGCCAGAA TCATCTGAGTCAGCA  95 33
TspCOW1_27240 NONE
TspCOW1_27250 NONE
TspCOW1_27260 2903808 .. 2903858 + -10.5  -2.78816   CGGCAAAACCGAAAA TCGCG-CCCAGTGGCGG--GGCCC AGTGCC GGTCCAGCCGCGACTGGGGCGCGA TGTCCTGGAAGATCA  57 97
TspCOW1_27290 2905689 .. 2905730 + -18.7  -4.72272   CGGTGCGGCACCCCG GGCCGGGGCCTGTCCTTTC CATT GAGGGGGCAGGGTCCGGCC  TTTTTCATGCCGCGC 100 91
TspCOW1_27300 2906393 .. 2906417 +  -3.3  -3.53012   TGCCGGTGTGGTCAG          CGCCTCACGGG AAA CCTGCGCGCCG          TTTCCACCCGGCCCG  49 338
TspCOW1_27360 2909312 .. 2909341 + -22.3  -3.66999   CGGATCCCGCACACA       CGAAAACGGCCCC GTTC GGGGCCGTTTTCG        TTTCCGTGACTGCCT 100 185
TspCOW1_27420 NONE
TspCOW1_27430 2917704 .. 2917714 +  -4.6  -2.57132   GCTTACAGTTCGACG                 GGTG AAT CGCC                 ATTGTCCGGGACAGG  43 66
TspCOW1_27440 2918621 .. 2918631 +  -4.6  -2.71924   CCGGCATCAAGTCCG                 TGGC CTT GCCG                 GTTTCCGCGACGGTC  44 193
TspCOW1_27450 NONE
        coaD 2919798 .. 2919809 +  -2.2  -2.92114   ACTGAAGGCGCGGCT                CGGT TAAT ATCG                 CTTTCATCTGATATA  40 19
TspCOW1_27470 2920161 .. 2920181 +   -14  -4.52589   CGACGAAATCCTTAA            CACCGGGC CTTCT GCCCGGTG            TTTTGTATGCAACCC 100 66
TspCOW1_27480 2921208 .. 2921231 +   -16  -5.80248   GTTTATCCTGACACA          CAGGGCGGCC GAAT GGCCGCCTTG           TTTTTTTCTGTATTC 100 53
         ggt 2923241 .. 2923254 +  -2.3  -3.72324   TCCAGCACCGCCTTG               ATGGC AGCT GCCAG                TTGTTCATAGCGCTG  51 245
TspCOW1_27510 2925696 .. 2925714 +   -11  -2.55074   ATGCCGTAACGTATC             CGTTCGCC GTC GGCGAATG             TGAGTTCGACTTCGC  59 366
        hyuA 2931977 .. 2931993 +  -5.7  -4.07568   TGAAATAGATCTCCG              GTTCGGC TTC GCCGGTC              TTTTCCGCCAGCAGC  64 431
TspCOW1_27580 2934326 .. 2934354 + -19.1  -3.07113   GCGTGACCAACCCAA        TAAAAAACCCGGC ATG GCCGGGTTTTTTA        TTGGGTCCGGTGATC 100 80
       coaBC NONE
         dut 2937392 .. 2937406 +  -4.2  -2.62184   GTTTCGGGCATACGG               GCCG GCAATAA CGGC               TGCTGTACACAGAAA  42 15
TspCOW1_27640 2940119 .. 2940133 +   -10  -2.61582   GCGCCAGCGCCCAGG               GAACCC TCG GGGTTC               ATTATGGGTACCCTA  62 120
        argB 2941478 .. 2941497 +  -7.8  -3.35679   CCCGGCGGGTGTCCT            GCTCGATC TCCT GTTCGAGC             TTGTCGATCCGGCCC  59 384
TspCOW1_27670 2943236 .. 2943248 +  -4.7  -3.15544   GGATAGCCGAGCGCT                CGCCG CGG CCGCG                TTCCTGACGGTCGAG  47 438
       xth_2 NONE
TspCOW1_27700 2945364 .. 2945386 +  -7.6  -4.19238   TAAAGAACTGTTTGC           GGAAACGCAC GTC GAGCGCTTCC           TTTTCGCCTTCGGGG  74 108
        pilT 2951820 .. 2951871 + -15.9  -4.37886   GCTTGCGGGGGGAGA GGGTCAG-GGTGAGG-GGGGGTCAG GCGT TTGCCCCCCCCCTCGCCTCTGCCCC TTTTATGCCCCCTGG 100 92
        pilU 2953537 .. 2953551 +  -9.2  -3.57144   ACACGCGTTTCATCG               CCGGGC CCT GCTCGG               TTTCCACCTGCACGG  64 447
        pilG 2964672 .. 2964688 +  -2.9  -2.60904   ACCAGTTGATGAAAG              GAGACGT TAC ATGGCTC              GTATTCTGATTGTGG  40 180
        pilH NONE
        pilI 2965676 .. 2965687 +  -5.8  -3.85698   AAGACCAACCATCAA                CCAG GATA CTGG                 TTTATCGAGGGCAGG  61 79
        pilJ NONE
        pilK NONE
TspCOW1_27970 NONE
        chpB NONE
TspCOW1_27990 2975797 .. 2975847 + -12.7  -4.36914   CCGAAAGAGCAAAAA GGGGTCGGTGACAAAAGAGAGTA ATTCG TATCATTATTTGTCACCGACCCC TTTTCTCACAAAAGA  93 55
TspCOW1_28000 2978100 .. 2978113 +  -9.5  -3.21593   CATGCCACGGGCTGT               CCGGC GGAC GCCGG                TCTTGTCCCGGGCTG  66 501
TspCOW1_28020 NONE
TspCOW1_28030 2981156 .. 2981169 +  -8.1  -2.71791   ACTGATCCGGGCGTC               CGGCA CATG TGCCG                CTTTGCCACAGCCCT  54 36
TspCOW1_28040 2981827 .. 2981843 + -15.1  -6.09196   TCCTCCTTCATGATT              GCCCCGC TTG GCGGGGC              TTTTTTTGTTTTGGA 100 57
TspCOW1_28090 2987371 .. 2987415 + -13.6  -2.57211   CGAGGCGCGAAGCGC CGTGGCAATCCCG-GTCGGCG GCTA TGCCGTTACGAGATTGCCACG CTTCTCCCACAGAAT  74 64
TspCOW1_28100 2988232 .. 2988267 + -10.4  -4.67038   ATGCGTGACAGTCCA    TGCGCCCT-GCGAGCCG GTA CGGCTGTCGAGGGTGCA    TTTTCGTTTTACCGG  90 209
        tktA 2990408 .. 2990444 +  -5.9  -3.23598   TGCGAGCGAAGCGTG    GCAATCTCGTAATGC GGCAGGA GCGGTAAGAGATTGC    TTCGTCACTTCGTTC  51 65
        gapA 2991749 .. 2991780 +    -8  -2.73159   GTGGTGGCTGGAAAA      CGATTCGTCATGCC CGTG GGCATCGCAAATCG       CTTTCAACAAATTAA  54 249
         pgk 2993014 .. 2993058 +  -2.8  -3.30554   TCAGTGAGGTGTGAG GGGGTGAGGAGTAAAACCGGT CCCG GTCG-TCTCACGCCTCACTCC TTACTCCTTACTTCC  45 44
         pyk NONE
TspCOW1_28150 2995774 .. 2995791 + -14.1  -5.43414   TCCCGGGACACGGAA             GGGCGGC TGCG GCCGCCC              TTTTTTGTGTCTGCT 100 51
TspCOW1_28160 2996007 .. 2996062 +   -11  -3.17319   GCCAGCCTTCGTTCC CGCGATTCGTAGGATGGGTGGAGGCGC CCT GCGCCGCAACCCAT-CACTGGCTCGCG TGTTGATGGGTTGCG  71 14
TspCOW1_28180 NONE
TspCOW1_28190 2998033 .. 2998043 +    -4  -3.91897   GGTATGGCGGGATCT                 TTTC GAG GAAA                 TTTGTGGCTGAAGGA  57 4
TspCOW1_28240 3002493 .. 3002537 +  -8.6  -2.70932   ATCATCAGGTGCTTC TGTTCGGG-ATGGCGGTCGCGG ATC TCGCG-CAGCCGTTCCTGGACA TGATTCACCGCGCCG  52 420
TspCOW1_28260 3004841 .. 3004864 +  -3.7  -3.01712   GTAGTTCGATCAGAC          TGCCGGGCG GATAGA TGCCCAGCG           TCTTGACCAGCAGGC  44 268
TspCOW1_28350 3010561 .. 3010574 +  -5.3  -5.00884   AGCTAATATTAGAAA               CACAA TATA TTGTG                TTTTTTCGGGCCGGT  83 52
       nrdJa 3013088 .. 3013136 +  -6.8  -3.18728   AGCTGCAGGATACAA GAGGCAGGATACAAGTCGGA TTGTCTGGT TCTTGCTTGTGTCCTGCATC TTGCCTCTTGCAACT  56 60
       nrdJb 3013885 .. 3013900 +  -4.6  -3.12668   GACTGTAAACAGGGT              CCCAGC ACGG GCTCGG               TTCGATCTGCAGGTG  47 48
TspCOW1_28380 3014169 .. 3014190 + -12.9  -3.10409   GACCGTGTCGTTCCC           GGCCCCCGC GGCC GCGGGGGCA            TTGCGTCCGTTGCTG  76 47
TspCOW1_28390 3014971 .. 3014986 +    -6  -3.06133   GGCGACCCAGTAGGC              GGGCAG CGCG CCGCCC               TTGAATACGGGCTTG  49 145
        gspA 3017019 .. 3017040 +  -2.1  -2.89971   GCCGCGTCTGCGCAG           TGCGCCGCG GGGG TGAGCCGCA            TGTCCTATATCCTCG  40 10
TspCOW1_28420 NONE
TspCOW1_28430 3018700 .. 3018716 +  -7.2  -4.45068   GTGGTGGCTTTGGGG              GCTGCC TTGGC GGCGGC              TTTCTTCTTCGCGGT  77 452
TspCOW1_28450 3023368 .. 3023386 + -10.2  -2.73364   CATTATTGGGTAAAC             TGCGCGCC CAT GGCCCGCA             TCCTTGCCGTCGGCA  63 140
TspCOW1_28460 NONE
TspCOW1_28470 3025042 .. 3025069 +  -7.6  -2.63301   GAGTGAGGAGTAGGA        TGGGTGGAGGCG CTTG CGCCGTAACCCA         TCGTCTCCGCCTGTG  53 475
        djlA 3027354 .. 3027406 +  -4.9  -4.45577   CGCTGCCATCAATAG TCGCGG-CGTGCGTCGGGTTACGCC TTGCC GGC-TAACCCGACCTACTATTGCGG TTTTGTGGCCTTTGT  70 141
TspCOW1_28540 NONE
TspCOW1_28550 3030561 .. 3030581 +  -3.4  -2.87463   TGCGAGCGAAGCGTG           GCAAT-CTT CTAA AAGCATTGC            TGTCTGGACGGGATT  42 89
TspCOW1_28560 3032423 .. 3032456 + -17.5   -3.9398   TGGATACCATGATTA     TTCCGTCATTCCCGC CTTC GCGGGAATGACGGCG      TTTGTGGGGTTATGC 100 178
TspCOW1_28570 3033204 .. 3033256 +  -6.4  -3.29187   ACGGAAAAAATTCAT TGCTGCTTCTCTCATCGCCA-GGCGC GCA GCGCCCTGGCGATGACA-AACAAACA TTCCGTGTTTTCCGT  54 94
        trpD NONE
        trpC 3035234 .. 3035265 + -18.8  -3.02324   CGGCCAGTTTCCCTT      TACGTCATGCCCGC GCAG GCGGGCATGACGGA       TATCATTTGGCTCCG 100 109
TspCOW1_28610 3037166 .. 3037194 +    -3  -3.41878   TGCCGTCATTCCGGC       GCCGGCCGGGATC CAGA GACTGCGGC-GGC        TTCTGGATTCCGGCC  47 91
TspCOW1_28620 NONE
TspCOW1_28630 3038926 .. 3038957 +  -8.6  -3.39327   TGGGAGAGAGCCGCT      GCAGGTGGCCGTCC AGGT GGGCGATGACCTGC       TTCTCGGTCTCGCCC  60 359
TspCOW1_28650 3040123 .. 3040152 +  -4.3  -5.81412   TGGTGGTTATACTTC       GGCGTGGCGC CCCTCCCTCTT G-GCCACGCC       TTTTTTTTGCCTGGA 100 304
        rplM NONE
        rpsI 3041222 .. 3041245 + -10.2  -3.39288   GCGCTGATCGCGATC          GGCTGCGGGC GTCT GTCCGCAACC           TGTTCTTGGGGGATC  69 34
TspCOW1_t00370 3041331 .. 3041360 + -23.7  -3.86346   CCCCCAGCCAATAAA       CGCGAAACCCGCC TTCT GGCGGGTTTCGCG        TTTATGGGGGACTGG 100 30
TspCOW1_28680 3042869 .. 3042895 +  -5.3  -4.07568   TGCCGTTATTGACCC        G-ACAACACACAG TAT CTG-GTGTTGTAC        TTTTGCGACAGAAAA  64 207
TspCOW1_28690 3044084 .. 3044101 + -14.1  -5.66684   TATGCAAGAGCTTGA             CGGGGCC TTCG GGCCCCG              TTTTTTTGTGCCTTG 100 57
TspCOW1_28700 3048300 .. 3048310 +  -8.2  -3.27994   TTATTATTGGAGAGA                 GCCG AAG CGGC                 TTCGTCTGGCCTTAA  59 78
       ilvA1 3051450 .. 3051467 +    -7  -3.79787   CCGGGCGCGATCGCC             GGCATC GATCGG GATGCC              TTTACCTTCCTATAG  66 486
TspCOW1_28780 3054711 .. 3054724 +  -2.3  -3.18264   GCCGCGCTGCGTTTA               TGCCC TTCC GGACA                TTCGTCCATGACGGG  44 108
        pepP NONE
        ubiH 3057364 .. 3057386 +  -7.6  -2.71144   AGGGCATGCGTAGGA           TGGGTGGAGC GCA GCGCAACCCA           TCGTTCAGGCAGGTG  54 85
TspCOW1_28810 3058651 .. 3058685 +   -13  -3.72893   GATGGGTGAAGCGCA     GCGCAACCCATC ATCCCGGTTGC GATGGGTTGCGC     TTTGCTCCACCCATC  84 47
TspCOW1_28820 3060171 .. 3060201 + -11.1  -2.59431   CTTTCCGTGGACAGA       GGGGCGACGGTTT CCATT AACCCGTCGCGCC       TGCATTATCGCCGCG  66 301
        gcvT 3061454 .. 3061505 +  -6.1  -3.46068   TCGCCTGGGCGCTAC GCGCC-CGGCGATG-ACAGAAAACAT TCA GTGTTTTCCGTGTATT-CCGTGGCGC TCTTTAAATTACACC  56 144
        gcvH 3061994 .. 3062028 + -12.8  -2.64981   ATCATTGCCTGGCCG     CGATGGGTTACGGCGC TGC GCGCCTTCACCCATCC     TACATTTGAGAATCT  71 81
       gcvPA 3063631 .. 3063651 +  -2.4  -3.39742   CGTCGGCTTGCGCCC            TGAGGGCC AACCC GGCCTGCG            TCTTCATTATTTCTG  46 201
         tpx 3064337 .. 3064382 +  -9.7  -4.26079   AGCGTGTGGTTTGCA GAATATGTCGTTGCCG-GGCGC GTA GCGCCACGGCAATGATAAAAAC TTTTCCGTGCTTTCC  83 110
       gcvPB NONE
        dgkA 3066468 .. 3066507 + -13.6  -3.81339   CTGGTTCTGCAGGCG  GCTTGTTGGGTTACGGCGC TGC GCGCC-TGACCCAACCTGC  TTTGAATTGTCCGTG  93 216
TspCOW1_28890 3067550 .. 3067577 + -21.4  -3.62597   TCGTCAAGCAACCAA        CGTCATCCCCGC CTGC GCGGGGATGACG         TTGTTCAACCGTGGC 100 42
TspCOW1_28900 3070359 .. 3070396 +  -3.3  -3.96148   CCCGACATCCCGCGG   CAGCTTGTCGGGTTA-CG TTG CGCTAACCCGACCTACAG   TTTCTCCTCCCACAC  58 83
TspCOW1_28940 NONE
        dpm1 3075463 .. 3075477 +  -2.7  -2.82516   TCTCGGAGGTGGACG               CGGAG TGAAC CGCCG               TCTGCTGCTGCGGGG  39 18
TspCOW1_28970 NONE
TspCOW1_28980 NONE
TspCOW1_28990 3078993 .. 3079027 +  -3.5  -2.52543   TGTCCGACTTCGGTA    CA-ATGGCGGGCCT GACCGAGA AGGCCCGCCCCATG     TCCCTTGCCGAAACT  39 125
TspCOW1_29000 NONE
         lgt 3081060 .. 3081090 +  -4.6  -2.54801   GGAGAAAATCGTGAA       AGTGGCGGCC ATATCTTCCCG GGCCGCCGCG       CTATCTTTGCCCGTC  43 55
        thyA 3082028 .. 3082045 +  -9.1  -3.22774   TATCAAGGCGCCGGT             GGCGGTG TGAT CATCGCC              TTCGTCGTCGCTATG  63 16
        folA 3082530 .. 3082550 + -12.5  -2.79327   GGCGCGACTGACGTC            GCCGCAGGG TGC CCCTGCGCC            CTTTCACTGGAGTCC  73 30
TspCOW1_29040 3083246 .. 3083267 + -17.3   -5.8187   CTGCACTGAGGTCTT           GGCCCTCCC TTCG GGGAGGGCC            TTTTTTTGTTGAGTG 100 77
TspCOW1_29090 3087062 .. 3087072 +  -5.4   -3.2048   CCCACCGGTCTAGAA                 TTGC GTC GCAA                 TTCCTCAAGTTTCGG  51 98
TspCOW1_29100 3087561 .. 3087581 +  -9.6  -3.65902   TCGAGGCGGCCATTT            CCGCGAGC TTGTT GCGCGCGG            TTTCGATCACCTGGG  68 253
TspCOW1_29170 NONE
TspCOW1_29180 NONE
TspCOW1_29190 NONE
TspCOW1_29200 NONE
TspCOW1_29210 NONE
TspCOW1_29220 NONE
TspCOW1_29230 3103743 .. 3103757 +  -5.6    -3.551   GAAATCGCGACGCAG               CCCCTG CAG CAGGTG               TTCTATCCGTTCGGA  54 109
TspCOW1_29340 3113673 .. 3113686 +  -5.2  -3.28984   TTGCTGCCCCCCCTG               CGCG CACCGC CGCG                TTCCTGATTCCGTTC  51 5
TspCOW1_29350 NONE
TspCOW1_29360 NONE
TspCOW1_29370 3119483 .. 3119522 +  -9.9  -3.29511   GCCTATCGCCGGGCG  GCGTGAGCGGGCCCGGCG CGGGT TGCCGGGAACGCT-GCGC  TTATCCCGGCCTGCG  66 20
        gatC NONE
        gatA 3131831 .. 3131876 +  -8.4  -2.89191   ATTTCAACGCAGAGA CGCAGAGG-CGCAAAGTCT TATACAAGT ATTCTTTGCGTCCTCTGCG TCTCTGCGCCTCTGC  59 55
        gatB 3133545 .. 3133576 + -10.9  -2.59742   CTGGGTAGTCCGTAG      GCCGGAATAAGGGC TGGAT GCCCGT-TTCCGGC      ATTATCCGCGTTGCC  66 221
TspCOW1_29510 3135153 .. 3135185 + -16.3   -3.2794   CGCGGAGCCGGGTAG      GATGGGTGAAGGCGC CTG GCGCCGTAACCCATC      TTCATGTACATGCCG  89 56
TspCOW1_29590 NONE
        lolB NONE
        ispE 3144511 .. 3144522 +  -2.2  -3.66356   GGCAGCGGACCGGAT                GTGA ACCG TCGC                 TTTGCCATTGAACAT  51 22
TspCOW1_t00380 3144623 .. 3144647 + -19.3  -5.00616   AGCCAAACACATCAC          CGGTCAGCGGC CGA GCCGCTGGCCG          TTTTTTAACCGGCCG 100 36
         prs 3145677 .. 3145689 +  -9.1  -2.52896   TGGACTGACGCCGGA                CAGGC CCG GCCTG                TCCGTTACGGCCTCC  57 33
        rplY NONE
         pth NONE
        ychF NONE
TspCOW1_t00390 3148353 .. 3148367 +  -4.2  -2.58544   GCTGGTCTGGGTTGC               GCTACA TGG TGAAGC               ATTGTGAAAATGCCC  42 107
TspCOW1_29660 3148972 .. 3148984 +  -3.3  -2.74242   AATATGCGATGAGGA                ATGCG ATC CGCAA                GTCTTTAATCTTCTT  41 178
TspCOW1_29670 3149410 .. 3149426 + -15.1  -5.35222   TAGAAATATGTCCCT              GCCCCGC AAT GCGGGGC              TTTTTTATGCCTTTT 100 88
TspCOW1_29680 3150358 .. 3150374 +  -7.9  -2.74563   GAATGCGCACGACCA              GGCAGGC ATG GCCTGCA              TCGTTGGGCTATCCG  54 416
TspCOW1_29690 3151159 .. 3151171 +  -3.3  -3.14211   AGGCAAGCGCACTCG                GGGTA ATA TTCCC                TTCATAAGAACCAAT  43 59
TspCOW1_29700 3151547 .. 3151584 +  -6.1  -3.65046   CTGACGATAGGATCC   CGGCCATCGTCAGCTGC CCAT GCAGCCAATACTGGCCG    TTATTCAGCTGGCGG  61 64
        iscS 3164583 .. 3164593 +  -2.4  -3.88583   CCCTTTAATGAGGAC                 CGCG ATG CCCG                 TTTCTGAAGCGTTTC  53 62
TspCOW1_29880 3165674 .. 3165692 + -10.2  -2.62184   AGCGTGCAGATCGGG             CCGGCGCA GCC TGAGCCGG             TGCTGTGCAAACACC  62 41
TspCOW1_29890 3166491 .. 3166516 +  -9.7  -2.94925   GCGGAAGGTGTAGGC         TCAGGCGGGACG CAG CG-CCCGCATGA         TGTGTCATCACGTCT  62 28
TspCOW1_29900 3168125 .. 3168182 +  -9.5  -2.83894   CGGGCGCTGGCCGAA CGGGCCGCCGGGGCGGCGCC-GTGATCC GCT GGTTCGCCGGCCACCCCACGGCGGCCAA TCTGCTGCTGATCCT  61 2
TspCOW1_29910 NONE
TspCOW1_29920 3173053 .. 3173110 +  -9.2  -3.64703   CCTCTCCCCGCTTGC GGGGAGAGGGCCAGGGTGAGGGGGTATAC AGC GCTTATCCCCTC---TTGGCCCTCACCCC TTTCCCTCAAGGGAG  72 80
TspCOW1_29940 3175322 .. 3175336 +    -7  -3.72576   ATCGCAACCCAGACG               ACGGGC CAG GCCCGA               TTTGGTCAGACCGGA  61 220
TspCOW1_29970 3178654 .. 3178673 +  -4.9   -3.5393   CTCGGCCGAGGAGCA            GCAGCCA TGAAGC TGGCCGC             TTTCGAGGCCGTCGT  53 16
TspCOW1_29980 NONE
TspCOW1_29990 NONE
TspCOW1_30000 NONE
TspCOW1_30010 3184560 .. 3184590 + -12.4  -2.87344   CTCCGGTCTCCTCCG       GCCAGGGGCCGCCC GCC GCGCGGCCTTCGGC       TCTGTGGACGGCGTC  71 480
   cas4-cas1 NONE
        cas2 3186943 .. 3186954 +  -5.8   -3.2964   ATTATTGCTGGGCTG                CAGC GGGG GCTG                 TTATCCACGGCATTT  51 220
TspCOW1_30060 NONE
TspCOW1_30070 NONE
TspCOW1_30080 NONE
TspCOW1_30090 3195681 .. 3195720 +  -4.1  -2.62184   ATCTCGCCGAACAGT  TCGAAGTCGTTGCCGGC AATGCC GCCGGTGACGATGCCGC   TGCTGTCCACGAAGA  40 405
TspCOW1_30120 3199857 .. 3199887 + -11.9  -3.41988   CAGTTGGCGATCTCC      TCCGGGGCCGGC-AC CCG GTCGCCG-CCCCGGG      TCTTCTTGCCTGGAA  76 392
TspCOW1_30140 NONE
        tmcA 3202659 .. 3202682 +  -6.7  -2.69921   CATACCGTTTCATCG          CTGCAGCAT CCCGTT ATGCTGCCG           TCACTTGTTGTACTT  48 181
TspCOW1_30160 3207958 .. 3207968 +  -6.8  -2.82933   CAGCGCAACCCATCG                 CGAC CCG GTCG                 TGTGATGGGTTACGG  51 80
TspCOW1_30200 3214216 .. 3214228 +  -4.8  -3.72576   CAGCGATTGCAGAAG                GTGC GGCAG GCAC                TTTCATAGAACCCGG  56 5
TspCOW1_30210 3215357 .. 3215376 +   -15  -4.48987   GACGGGGACGAAAAA            GGGGTGGC AATT GCCACCCC             TTTTGCTTGTCGGCG 100 62
TspCOW1_30270 NONE
TspCOW1_30280 3222092 .. 3222109 + -14.1    -5.055   TTTTGTAATAGAAAA             GGCCCGC TTGC GCGGGCC              TTTTTTCAGCGTTGA 100 49
TspCOW1_30300 3224467 .. 3224507 +  -4.5  -2.87325   ACATGCGCCCGGAAG CCTC-GCCCGCCCGACGC TGACTT GCGTGCGGCGGGAAGCGG  GTTGTTGTACGGGAT  46 109
TspCOW1_30320 3225290 .. 3225305 +  -4.7  -4.17556   CCCTGCCTGAATCTG              CGTCA CAGCTT TGACG               TTTATTGACCCTCTG  64 42
TspCOW1_30330 NONE
TspCOW1_30340 3226152 .. 3226189 + -13.3  -3.58343   TCGCGTAACCCATCA   GGCCCGGCGGGCCGCGA TGGG TTGCGGCGCGTTGCGCC    TTTACCCATCCTACC  83 79
TspCOW1_30360 3228937 .. 3228953 +  -5.7  -3.85698   TGCAGCAGACGACCC              CGGCAGC GCC GCAGCTG              TTTGTCCGGCCGCAA  60 373
        btuF 3231440 .. 3231458 +    -6  -3.20723   CAGTGACTGTGCCGC             CAGTATTC CCA GCATACTG             TTGAGTTCGTCGACC  51 479
TspCOW1_30420 3234373 .. 3234417 +   -10  -3.06796   GAAGTATGCTTCCCT GACCTGTCGCCTTCCCAC-GC GTAC GCAGTGGCACTGTGACAGGTC TTGACTCGCCTACCG  66 142
TspCOW1_30430 3235235 .. 3235262 +  -5.5  -3.57561   CGCTGCGACCGACTG        CATCGGCCAGGC GTAGA GCC-GGCTGAGG        TTTCCGGCATTGAGC  54 170
        rppH NONE
        ptsP NONE
TspCOW1_30490 3241147 .. 3241167 +   -14   -2.8382   CACATCCCTCCTGTC            CCCGGGGT TGCAT ACCCCGGG            CTTTGCGGTTATTTC  76 61
         bfr 3241731 .. 3241747 + -10.8  -5.09895   CTCTGCCAAAAAAAA              CGCGGG ACAAG CCCGCG              TTTTTTCACTCAGTA 100 74
        argC NONE
TspCOW1_30570 NONE
TspCOW1_30580 NONE
        erpA 3249634 .. 3249667 + -22.5  -3.53091   TCGGCTTCTCCTGCC     CGCGAAAGGGGCGCC CTCG GGCGCCCCTTTCGCA      TTTCCGGAGCCCCGT 100 45
      gltA_2 3251303 .. 3251353 +  -8.3  -2.52464   CGCAGACGATCAGTT CCGCTGC-ATCCTGTGCCGCGCGC AGTACG GC-CTCGGC-CAGGCTGGCGGCGG TCAGTTCCGCCAGGG  51 294
        tyrS 3255257 .. 3255289 +  -5.4  -4.72386   CGGAAACGGCAGCGG     CTGCCCG-CCCCGGG CCGG TCCGGAGTCGGGCGA      TTTTTCAGTGATTTC  79 72
TspCOW1_r00010 3257241 .. 3257269 +  -4.6  -2.60244   CGGCAGCCATTGGTT       GCATATAGAGCCG ACCT CGGGTCTGTA-GC        TCAGTTGGTTAGAGC  43 91
TspCOW1_t00400 NONE
TspCOW1_t00410 3257440 .. 3257479 +  -9.4  -3.62046   TAGTCCTGCCAGTCA  CCAGTCGCGAACAA GCACCAGCATAA ATGTTCGCGACTGG   TTATTGGACCAGTGC  69 42
TspCOW1_r00020 3260524 .. 3260546 +  -5.6  -2.58714   GAGGCTTGACCATAT           AACACTCAAG CGG TTTGAGTGTG           TGGGTTGGTCTCAAC  46 29
TspCOW1_r00030 3260767 .. 3260793 + -20.2   -5.0916   GGCTTTAATCCCAAA         CCCCGTGTCTGG AAC CCAGGCACGGGG         TTTTTCTATTCAGAC 100 41
TspCOW1_30640 3262192 .. 3262213 + -15.1  -5.60993   CTGCTTCGCGCAGAA           GCGGCGGCC TTCG GGTCGCCGC            TTTTTTTATGGCCGG 100 53
TspCOW1_30650 3263037 .. 3263057 + -10.3  -3.17723   TTCGCCCCTTGTTCC            GCCCCGGCT GCA GGCCGGTGC            TTCCCTTCCGCATCC  68 139
        birA NONE
        coaX NONE
TspCOW1_30680 NONE
TspCOW1_t00430 3266166 .. 3266182 + -11.5   -2.5409   GCTGAGCTTCCACTG              GCTGCCG AAG CGGCGGC              TGGCTTCCAGGTTGT  61 170
      lexA_2 NONE
TspCOW1_30720 3270231 .. 3270274 + -14.6  -3.05384   GGTTAGCCCGTCAGG GCGTAACCCGACACGAC-ACG ATC CGCCGGCCTGTCGGGTTACGC TTCGCTAACCCGACC  83 134
TspCOW1_30740 3272774 .. 3272795 + -11.6  -5.18355   CAGTTCCGTTCCGAA           GGCCACAG TTCACT CTGTGGCC            TTTTTCGTTTTTCGG 100 271
        pagO 3274002 .. 3274014 +  -4.7  -3.29471   GAGATTGCCGTGGGT                GTGCG GAC CGCCC                TTGATCTCGTCGAGC  49 301
         qor 3275484 .. 3275512 +  -3.7  -4.37886   TGGGGCATAAAGGCT        GCCCTTGCGGG CGTTCAA CGCGCAGGCGC        TTTTGTCCGGCCTGC  65 140
TspCOW1_30790 NONE
TspCOW1_30800 3277432 .. 3277449 +  -6.9  -3.04144   AACTCGGGGAGTTCA             GCCGCCA TATG TGACGGC              TGTTCGGCCTGAGCC  54 12
TspCOW1_t00440 3279208 .. 3279223 +  -3.2  -2.92668   ATGCGGGGCCCGGGT              CCCG GAATTGCG CGGG               TGTAGTTCAATGGTA  42 107
TspCOW1_t00450 3279344 .. 3279362 +  -2.2  -2.52543   TGATCACCCCGCTCC             GCGGTCTG CAT CCGGCAGC             TGAATTCAAGCCCAT  38 76
TspCOW1_t00460 3279437 .. 3279449 +  -6.3  -3.20901   CAGTTCAAATCTGGT                TATGG GCT CCATA                TTAAATTAGTAACCT  54 15
TspCOW1_30820 3280710 .. 3280755 +  -5.3  -2.91593   ATCGAGTGAGGTGTA AGGAGTGAGACGTGAGGAGGG GATG TTCTCCTCACGCCTCGCTGAA ATTTATAGGGCAGTA  48 32
TspCOW1_t00470 NONE
      secE_1 NONE
      nusG_1 NONE
      rplK_1 NONE
      rplA_1 3283223 .. 3283242 + -11.4  -3.96148   AGACTTTGTGGCACG            CCGCTGTC TTCC GGCAGCGG             TTTGTCGTCAAAGAC  85 87
      rplJ_1 3283986 .. 3283998 +  -6.2  -3.30007   GTTCAAAAATTTGAC                GCCC CTTGC GGGC                TTGTGGACAAGTATT  54 45
      rplL_1 3284481 .. 3284508 +  -6.2  -5.28414   ACCGGGGAAAGCTCC        GGCTGGTGGC GAAACTGA GCTGCCGGCC         TTTTTCTGTTTGTTG  90 99
      rpoB_1 NONE
      rpoC_1 3293134 .. 3293164 + -17.7  -4.67048   ATTGCGCGTCTTTCC      CGACAGGCCGGGCA ACCA TGCC-GGCCTGTCG       TTTATTTTCCGGTCG 100 107
      rpsL_1 NONE
      rpsG_1 NONE
      fusA_1 3296268 .. 3296284 +  -2.9  -2.62184   TAGAGACCAACAGAA              CTGTAAC GAG GTAGCAG              TCGTGTCCAAGGAAA  40 46
TspCOW1_30940 3297484 .. 3297529 +  -5.3  -2.91593   ATCGAGTGAGGTGTA AGGAGTGAGACGTGAGGAGGG GATG TTCTCCTCACGCCTCGCTGAA ATTTATAGGGCAGTA  48 32
TspCOW1_t00480 NONE
      secE_2 NONE
      nusG_2 NONE
      rplK_2 NONE
      rplA_2 3299997 .. 3300016 + -11.4  -3.96148   AGACTTTGTGGCACG            CCGCTGTC TTCC GGCAGCGG             TTTGTCGTCAAAGAC  85 87
      rplJ_2 3300760 .. 3300772 +  -6.2  -3.30007   GTTCAAAAATTTGAC                GCCC CTTGC GGGC                TTGTGGACAAGTATT  54 45
      rplL_2 3301255 .. 3301282 +  -6.2  -5.28414   ACCGGGGAAAGCTCC        GGCTGGTGGC GAAACTGA GCTGCCGGCC         TTTTTCTGTTTGTTG  90 99
      rpoB_2 NONE
      rpoC_2 3309908 .. 3309938 + -17.7  -4.67048   ATTGCGCGTCTTTCC      CGACAGGCCGGGCA ACCA TGCC-GGCCTGTCG       TTTATTTTCCGGTCG 100 107
      rpsL_2 NONE
      rpsG_2 NONE
      fusA_2 3313042 .. 3313058 +  -2.9  -2.62184   TAGAGACCAACAGAA              CTGTAAC GAG GTAGCAG              TCGTGTCCAAGGAAA  40 46
TspCOW1_31060 3314261 .. 3314317 + -17.9  -3.86346   GAGTAAGTTGTAATC CATTGCAGGAGCGGGCTCGCCCGCGAA CAC TTCGCGGCCAGGGCCGCTCCTGCAGAA TTTATAGGGCAGTAG 100 35
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB 3317126 .. 3317144 +    -6  -3.14211   TAAGTTTAAGGGGAT             CTAAACGT GCC ACGTTCAG             TTCGTAAAGGGCCGT  52 38
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF 3321985 .. 3322003 +    -3  -3.31144   GGCGGCGGTCGGAAT             CGTCGCTG GTG CAGAGAGG             TTATCGAAATGGCAA  45 60
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 3325080 .. 3325113 +  -2.1   -5.5604   GGTACAGCGACCGGT     ACTGGAGCCGGGCGC AGAC GCGTCCGGCGATTGA      TTTTTTGTTCATTGC  85 206
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA 3327658 .. 3327679 + -18.7  -3.66256   GATTGTATTATTGAC           CGGGCGCGG ACTG CCGCGCCCG            TATTTTCGGGATCTG 100 50
        rplQ 3328128 .. 3328144 + -10.8  -5.50499   TGCGTGCACAGAAAA              GCCGGG CCTGC CCCGGC              TTTTTTTGCGTCTGA 100 51
TspCOW1_31340 3329414 .. 3329436 +    -4  -3.16564   CGCCCTCCGGCCCCA           GGTCGATGAC CCA GTCGGCGGTC           TTGATCACGTCCAGA  45 439
TspCOW1_31360 3333611 .. 3333640 + -20.1  -2.78715   GACGGACGCCGCCGG       GGGGGATTTGCCG GCGC CGGCGAATCCCCC        TATGATGGGCAGCTT 100 41
         ssb 3334288 .. 3334307 +  -6.3  -4.07568   ATCCCGACTCCCGTA            TCGCCGC CAGTTC GCGGCGC             TTTTGCAGCAGCAGG  66 155
        mraZ NONE
        rsmH NONE
TspCOW1_31410 NONE
        ftsI NONE
        murE NONE
        murF 3341102 .. 3341114 +  -5.5  -2.64616   GCCACGGCCGGGAGG                GCGTC ACT GATGC                TGCTCTGGCTGGCCG  46 16
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
TspCOW1_31500 NONE
        murB NONE
        ddlB NONE
        ftsQ NONE
        ftsA 3351494 .. 3351526 +  -5.4  -2.53263   TTCTAGTTACGCAGT      CACGGGGTTCCCGG TCGGT CCGGGAGCGAAGTG      TCACTTAACCATCAA  45 35
        ftsZ 3352814 .. 3352828 +  -3.4  -4.52345   TCCTCGAGCCGGGGG               TGTCCG TTG CGGCCG               TTTATTTAATGATGT  66 110
        lpxC 3353987 .. 3354019 + -21.4  -3.54424   CTGCGTTCTCCCTCA     CGCCAGCAGGCCCGC GTAT GCGGGCCTGCTG-CG      TTTCCGGGGCTCAGC 100 46
TspCOW1_31580 3355621 .. 3355658 +  -6.7  -3.16564   GGCGTTCAACACGCT   CCGCGCTTCTGCCCGGC CTGC GCCGGGATGACGGTCGG    TTCCTGCGCTCCCGC  52 165
        secA 3358540 .. 3358591 +  -2.6  -2.79098   AAGCACGGACCAAAG CA-AGGTA-CT-GATTCCCGTCATTC CCGC GAA-GGCGGGAATCCAGATACCGCTG TGGTTACTGGATCCC  39 74
        argJ NONE
TspCOW1_31610 NONE
TspCOW1_31620 3361640 .. 3361652 +  -9.1  -3.86897   AGGGATTGTCTTCGG                CCCAG CGG CTGGG                TTTGTCGCAGGTGGG  71 328
TspCOW1_31690 3368975 .. 3368989 +  -4.2   -3.6502   CGGAAAAGGCGATGC               TTGCGG CTG CTGCAG               TTTGGATAAGCAGTA  54 245
TspCOW1_31720 3370449 .. 3370461 +  -4.1  -4.71186   CATTGATTCCGGCGG                CGATT GCG AGTCG                TTTTGTGTTGCTGCT  70 118
TspCOW1_31730 3371238 .. 3371249 +  -4.4  -3.32844   CGGCACGGAAGAAAG                CCAT GGTG ATGG                 TTGTGGGGTAGGAGA  49 354
        sucC 3379531 .. 3379545 +  -2.8  -3.14134   ATCCGACCTACGGGA               GTTACA ACC TGGAAC               TATATTCATGAGTAT  43 96
        sucD NONE
        nadE 3382154 .. 3382179 +  -8.3  -3.07344   AAATTGGCTCCGTCA         TTGCGA-GGCGC ACA GCGCCGTGGCAA         TCTCTTGCCGACTGG  57 91
TspCOW1_31830 3383017 .. 3383038 + -10.8  -3.33737   TACCATGATCTCCAG           CGCCCCGG GGATTG CCGGGGTG            TTCTGGAAATTCCTG  66 331
        rluD NONE
TspCOW1_31860 3385675 .. 3385713 +   -11  -3.57462   GTTCACGCCGCCACC   CCGGGATTACTCCGCA CGCCCGC TGCGGTATGATCCCGG   TTTCGCCGTAGAATA  74 248
TspCOW1_31870 3386641 .. 3386684 +  -9.6  -2.79952   CGACGCAGTCCGCGG TTCGTGTGTCGGGTTATGCCC TGC GGGC-TGATCCGACCTACGCA TCATTGACTTCATAT  61 132
TspCOW1_31880 NONE
       def-2 3387842 .. 3387871 + -15.1  -3.28173   TAGACAATGCCGGCC       TGTTG-CCCGGCGC GCA GCGTCGGGGCAACA       TATTGATATTCTCAT  87 72
        clpB 3391677 .. 3391697 + -11.8  -5.80817   CGCCAAGTCAGGCGT            GCCCCGTG TCCCC CGCGGGGC            TTTTTTTGTCTTGAG 100 326
TspCOW1_31920 3392970 .. 3392983 +  -5.3  -3.23869   CGGGTCGGTCCTCCT               CAATG AAGT CATTG                TGTTATACAGTCCTG  51 61
TspCOW1_31930 3393307 .. 3393333 + -10.8  -4.10429   AGGGCCTGACCGTAG         GATGGGTGGAGC GAA GCGCAACCCATC         TTTTCCCGAGTGATT  82 32
TspCOW1_31980 3398829 .. 3398841 +  -3.3  -2.71712   GGAAGAGCAGGAAGC                GGCCT GAC AGGCG                ATTTGAGGCCAGGGG  41 19
        pomB NONE
TspCOW1_32000 3400746 .. 3400782 +  -5.2  -3.56318   GGCAGGTTCGGGGCC   TCCGCCTCG-C-GGAACT CAT AGTTCAAGATGAGGCGGG   TCTTCTTGTTGAAGA  54 155
        prtI NONE
TspCOW1_32040 3403932 .. 3403960 +  -9.5  -2.90763   GTCCTGCAGGGCATC        GGTTGGGCTGAAC GCG GTGAAGCCCGACC        TGTATAGCATCTAAG  62 63
TspCOW1_32060 3406403 .. 3406416 +  -9.5  -4.36729   CACGCCAGCGCTGTC               CCGGC GCGA GCCGG                TTTTAACTTGTTGAT  83 97
TspCOW1_32070 3406750 .. 3406782 + -16.3  -3.75933   ACTGAACCCCTTCGC      CAGACCGGTCCGG TTCTGGT CCGGACCGGTCCG      TTTCCTCCCGTATCT 100 36
        aspS 3408893 .. 3408903 +  -2.4   -3.4072   GTTCCGCGTCCCTGC                 TGCG TCC CGCC                 TTGTACTCGACCATC  46 211
        ilvI 3413267 .. 3413283 +  -2.2   -4.2573   AAGCGGTAGTGAAAT              GCAGAG CAGCT CTGTGC              TTTTCGCATTATTTG  62 99
        ilvH 3413859 .. 3413873 +   -10  -2.70932   AGGTAATCGCCAGGG               CGCTGA TGA TCAGCG               TCATTGCGAGGCGCG  63 44
        ilvC 3415054 .. 3415069 + -11.8  -4.74103   CTGAGACAATCACAA              GCGCCC CACG GGGCGC               TTTTTACATTCGCAA 100 37
TspCOW1_32140 NONE
TspCOW1_32150 NONE
        pssA 3416784 .. 3416795 +  -5.8  -3.87075   ATAGCCTGAGCCGTC                CAGG TGCT CCTG                 TTTCTGGGCGATGAT  60 277
TspCOW1_32190 3420749 .. 3420768 +  -4.4  -3.58726   CGCATTTCAGAGGTA            GTGAAAAT ATAG ATTTTTAC             TTATCTATAAAAAAC  53 73
TspCOW1_32200 3421454 .. 3421468 +  -3.5  -3.70902   GTCGTGACAATCCAG               CGTTG CGTCC CGACG               TTTCGATCTCAAAGG  52 86
TspCOW1_32210 3422267 .. 3422289 +  -6.8   -3.8512   TCTGAACGGCTTCAA           CCGGGCCCCC GCT GCGGACCTGG           TTCTTGTGCTGCGTC  66 186
        leuA 3424096 .. 3424122 +  -5.7  -2.78384   CAGCCGAAGCGCCGA         TGGAGCCGGCG CCGCC TGCCGGGGCCA         TGTCCTCGCCCGCAC  47 116
TspCOW1_32230 3424727 .. 3424753 +  -7.1  -3.38046   CCGCCAGCCGGTGGA         GGCGGCGGAGC AGTGA GCGCCGTCCCC         TGTTTCGAGTCCGGG  58 10
        rimI 3425256 .. 3425272 +  -4.4  -2.52464   GCAAAGCGTAACCCA             TCAGCGG GCAT CCGC-GA              TGGGTTGCGGCGCCC  43 75
        prfC 3427242 .. 3427262 + -15.5  -5.64421   CTCTACTACTGACTT            GAGGGATGC CAT GCATCCCTC            TTTTTTATTTCCGGT 100 299
TspCOW1_32360 NONE
TspCOW1_32370 3443537 .. 3443550 +  -8.1  -2.78816   CAGGAACAGCACGGC               GCCTG CCAG CAGGC                TGTCATACAGGATGG  51 433
TspCOW1_32390 NONE
TspCOW1_32400 NONE
TspCOW1_32410 3444933 .. 3444969 + -15.1  -3.21395   AGACGAAGGGAGCGA    CGCTGTCCGCGTCCTGC GGG GCAGGACGCAGGTGGTG    TATTATACGCGGAGT  87 111
        pcnB NONE
    folK-2_2 NONE
TspCOW1_32440 NONE
        panB 3448472 .. 3448511 + -13.6  -3.72893   GTGGAAGCGCGTAGC  GCTGCAACCCATCGGCATC ACG GGCGACGATGGGTTGC-GC  TTTGCTCCACCCATC  88 146
        panC 3449426 .. 3449450 +  -3.6  -2.78712   AGGGCCTGAGGCCGA         TTGCGCCATTC GGGA GGATGG-GCGA          TAATTCCCTTCCCCA  43 32
        panD 3449852 .. 3449869 +  -6.3  -3.79251   CGGCCACGACATCCC             CGTTCAGG TCG CCTGA-CG             TTTGCTGGTCCCCTG  64 10
TspCOW1_32480 NONE
TspCOW1_32490 3451300 .. 3451328 +  -7.3  -3.53012   ACGAGTGGTGCTTTT        TCAGGCGCAACCC GCA GGGCTGGGGCTGA        TTTCCCGCCCAGCGG  60 244
TspCOW1_32500 NONE
TspCOW1_32510 3453490 .. 3453522 + -14.2  -2.79796   GAAATGATCGATATT     GCATTGCCGTGGCGC ATCG GCGCC-CGGCAATGA      TGTAGTAAAGTCAGG  80 67
TspCOW1_32540 3456251 .. 3456283 + -14.1  -2.58069   AGGAGTGAGGCGTAG      GATGGGTGGAGGCGC GCA GCGCCGTAACCCATC      GTCTTATCGTATAGC  78 33
        pdhA NONE
TspCOW1_32570 3459788 .. 3459818 +    -2  -3.08073   GCTCGCAAGGACGAC      CAGA-GCAAG-TGC CGTGC GTATCTTGCATCTG      TATCTTGCAACTGAT  41 205
TspCOW1_32580 NONE
TspCOW1_32590 3463489 .. 3463499 +  -8.2  -3.06261   ATTGAATAACCTTGG                 CGCC CTT GGCG                 TCTTGGCGGTTCACA  57 80
        argG 3464759 .. 3464782 + -11.7  -2.57132   CGCCCTGCGTCTGCG          CATCGCCGC GCGACG GCGGCGGTG           ATTATAAAAGAGCGC  69 1
TspCOW1_32620 NONE
        pstA NONE
        pstB NONE
        phoU 3472977 .. 3473004 +  -5.4  -3.85539   ATACCGCCGTGGTTA        CTGGATCCCCGC CTGC GCGGGGATGACG         TTTAGTGTGGCTATA  61 141
        hyuB NONE
TspCOW1_32700 3478337 .. 3478371 + -12.8  -2.84098   CGTGTGCCGGTCGGG     TGATGGGTTACGGCGC CGC GCGCCTTCACCCATCC     TACTTGCTTAACCCG  73 78
TspCOW1_32710 3480357 .. 3480384 + -12.7  -2.64794   GTAGGTCGGGTTAGC        CCGCAGGGCGT AACCCG ACGCACTGCGG         TCCTGTCGGGTTACG  71 52
TspCOW1_32720 3481054 .. 3481082 + -21.7  -5.66684   GGCTGACCACTGCGA        CCACGCCCCCGGC TCC GCCGCGGGCGTGG        TTTTTTTATGCCTTA 100 52
TspCOW1_32740 3483167 .. 3483188 +  -5.7  -3.72051   TATCGATATCGACAA           CCCGGTCTG AAAC CGCGCCGGG            TTTGACCTTATTCGC  58 16
        petA NONE
TspCOW1_32760 NONE
TspCOW1_32770 3485992 .. 3486032 + -20.4  -4.65168   GACAGTACAGGTAAG GCCCCGGGCCGGTGGCGCG TGCG TGCGCC-CCGGCTCGGTGC  TTTTTCAGGTATACT 100 53
        sspA NONE
        sspB 3487192 .. 3487216 + -12.1   -3.1372   AGTAAGCCTTCCCGC          GGGGGCGGG GCGCTCA TCCGCCCCC          TGTTCCTGCGCACTG  69 36
TspCOW1_32810 3489353 .. 3489369 +  -3.7  -2.73483   ACGGTCAAGTTCGCA              TGTGC AAAAAAC GCACA              TGCTTGGACTCCGCT  43 45
TspCOW1_32820 NONE
TspCOW1_32830 3490914 .. 3490925 +  -2.2   -2.7186   CCTAACCAAGCGCCC                CAGC CGAC GTTG                 TAGTTCCCCCGCTTT  39 36
TspCOW1_32840 3491363 .. 3491391 + -11.8  -3.02946   GAGTGAGGTTTCTAT       GCCACTGGCTGGG CGTC TCCA-CCAGTGGC        CTTTATGCTTGGGAG  73 35
TspCOW1_32850 NONE
TspCOW1_32860 NONE
TspCOW1_32870 NONE
TspCOW1_32880 3493873 .. 3493892 +    -5  -2.87132   CTAACGCTCGACGAT            TAGCGG GGCGTTAG CCGCTA             TCTATGAACCCGAGC  46 101
TspCOW1_32890 3494231 .. 3494243 +  -3.3  -2.51966   CTGACAAGTCAGCCA                GTCCG GCG TGGGC                ATTGATGAGCTTTGA  39 37
TspCOW1_32900 3495034 .. 3495053 +   -10  -5.52384   TGGTCATATTTAAAA            GCCTCGTT CATT AACGGGGC             TTTTTTTGCTGAACA 100 46
TspCOW1_32910 3496260 .. 3496286 + -20.2  -4.04174   ACTCAAATGTGTCCG         GGGCTGCACCGT CTG ACGGTGCGGCCC         TTTCGTTGTGTCCGG 100 67
TspCOW1_32920 NONE
TspCOW1_32930 3497727 .. 3497746 + -10.6  -3.28712   TGTGCGTCTGGCTGG            CGCCGGCC ACCT GGCCGCCG             TTGTAGAAGCCCAGC  66 489
TspCOW1_32950 3499367 .. 3499410 +  -5.1  -3.39216   GCTGTGGCTGCAGTG GCAGG-CCGCCCGGGGCCGG TGAAC CCGCTTCCCGTCGGGCTTGC GTTTTTGCCTGCGCG  51 4
TspCOW1_32960 NONE
TspCOW1_32970 3501581 .. 3501606 +  -5.9  -3.17763   TTGTAGTTCTTGCTG         CAGGGCCGCCC TGAC GGGCAGCCGGG          TTGGTGGGCTCTGAC  51 256
        rsmI 3506713 .. 3506732 +  -4.2   -3.9461   GCAGGATCAGTTCCA            GTTCGTCG CCGA TGCCGAAC             TTGTTCTTGACCGCC  59 437
         nnr NONE
TspCOW1_33070 3511601 .. 3511613 +  -3.3  -3.65425   TCCCAATGCCTTAGA                CCGGT TTC ACAGG                TTTGCCCTATATCCC  52 63
        amiB NONE
        mutL NONE
        miaA 3515917 .. 3515932 +  -4.6  -2.64155   GCTGTCGCGGGTGAC              GCAGGA ACTG TCCGGC               TGGATTTGAAAAAAG  43 1
         hfq 3516411 .. 3516426 +  -4.6  -2.76509   TGTCTGACTGTCACA              GCGTCC TGCG GGGTGC               GTTCCTTGTTTGAAC  44 34
        hflX NONE
        hflK NONE
        hflC 3519911 .. 3519963 +  -9.1  -2.52896   CGGGCGGTACCCAGG GCCG-CTGAACGCGGG-CCCGG-GCGC ACG GCGTGCCGGGTCCCGCGC-CGGTCGGA TGGATTGAACCGTCA  57 18
TspCOW1_33150 3520147 .. 3520159 +  -4.1  -3.09516   TCGGCCTGACGCTGC                TGTAC TGG GTGCA                TTGAGTCCTGCAACC  45 9
        hisZ NONE
        purA 3523017 .. 3523060 +  -4.1  -2.90075   ACCCGACATGCCGCG GTATGT--GTCGGATTACGCAC TGC GTGC-TAATCCGACCTACGGAC TATACTTGCCGCCAC  44 95
       cphA1 3524132 .. 3524161 + -25.1  -2.53382   GTGAGTGAAAAGCAA       CGGGGCGGTACGC TGAT GCGTACCGCCCCG        TCAGTTAAAAATACT 100 33
         rnr NONE
TspCOW1_33200 3527441 .. 3527467 + -19.4   -5.4505   TTACGGGTACAGCCG         CGCCGCGCGTCG TCT CGACGGGCGGCG         TTTTTTATTCACGGC 100 45
        rlmB 3528543 .. 3528570 +  -7.6  -2.52464   CGTAGAATACACCGC        CTTTCGGACCGC TGTG GCGGGCCGGAAC         TCCCTTGCCGCACCG  53 58
        rpsF NONE
        priB NONE
        rpsR NONE
TspCOW1_33250 NONE
        rplI 3531086 .. 3531123 + -16.1  -4.08706   GTTGCACCTCATGCC   AACCCCCGGCCGCGGCC GCTT GTCCGTGGCCGGGGGGC    TTTGTATGCTGGCAG 100 69
        dnaB NONE
       alr-2 3533803 .. 3533815 +  -3.4  -2.72344   GAAACGTCAAATCCG                TGAC TGAGC GTCA                TCATTAAGAATCAGC  41 183
TspCOW1_33290 NONE
TspCOW1_33300 3536970 .. 3536985 +  -4.6  -3.90316   TAGGGTCGGGGAAGA              GCCTCC GGCT GCAGGC               TATTTTTCCCGGCGT  59 38
TspCOW1_33320 NONE
        radA 3541307 .. 3541329 +  -6.3  -5.36441   TCTGCGTCCCCTGCG          CCTTC-GCGC CTCT GCGTTGAAGG           TTTTTTATATCGAAC  95 237
TspCOW1_33370 3545933 .. 3545943 +  -6.8  -2.90901   TCTGGCCGGCGGCCA                 GCTG ATC CAGC                 TATAATTCCCCCTGT  53 10
         ffh 3547819 .. 3547831 +  -3.4  -4.22309   GTTGTAAAGCTCGAC                TCCA CCGAC TGGA                TTGTTGTTGTTTTGT  60 366
        rpsP 3548561 .. 3548585 +  -7.8  -2.76492   GGCCAAACTGATCGA         GCAGGACCGCG CCAG CGCGG-CCTGA          ATTTCCGCTGCCTGA  54 1
        rimM 3549096 .. 3549110 +  -3.4  -3.28712   GGTCTGATCGAGGTC               GACTGG GAC CCGGAC               TTCTAGGCACCACCC  45 5
        trmD NONE
        rplS 3550298 .. 3550322 + -15.7  -5.78622   CCGAGCTCACAGAGA          CGCCATGCGGG TCA CTCGCGTGGCG          TTTTTTTTGGAATGA 100 58
TspCOW1_33430 NONE
         ogt 3552714 .. 3552724 +  -8.2  -2.98942   GGGGCTTGAAAAACC                 GGCC CGC GGCC                 TATATCTGCGCACCT  56 32
        htpG NONE
        ywbO NONE
        hslR 3555954 .. 3555995 +  -6.5   -3.0682   CAACAAACCGGGCGG CGATTGTTGGGTTACGGCGC TAC GCGCC-TAACCCAACCTACA TATATATCTGCTGCG  52 298
TspCOW1_33500 3559281 .. 3559297 +  -5.1  -3.36327   CGATCAGCCCCAGGC              CGATGCT GCC GGTATCG              TTGTCGATGGGGTGA  53 211
TspCOW1_33520 NONE
TspCOW1_33530 3562629 .. 3562647 + -13.2  -2.87683   ATCCAGTCAAAAAAA             CGTCATGC CCG GCATGACG             TGTCTCCCCGAATGT  74 69
TspCOW1_33540 3564037 .. 3564051 +  -2.7  -3.63251   GTAAAGTTTTCCAGA               CGCTC TGAGC GCGCG               TTGTCGTTTGATGGT  47 320
TspCOW1_33550 3565841 .. 3565855 +  -8.5  -3.41051   GCATTCCTGGGCATC               CGGCC GGACG GGCCG               TTATACTGGAGATCA  64 92
        trxC 3566378 .. 3566395 + -11.3  -3.06815   TCACTTCAGCCGTCA             TTCCCGC GAAG GCGGGAA              TCTATTGACCACAGT  69 130
TspCOW1_33570 NONE
TspCOW1_33510 3558713 .. 3558733 - -10.3  -2.55544   TGATCATCGAACTGA            CCGACCGCC CGG GCCGGCCGG            TGGTGCTGATCGAAC  57 499
TspCOW1_33490 NONE
TspCOW1_33480 3555727 .. 3555739 -  -4.1  -4.81249   GCGCAAAGCGAAAAA                TCCTG CCT CAAGA                TGCAGGTTGGGTTAG  75 337
TspCOW1_33360 NONE
TspCOW1_33350 3542365 .. 3542376 -  -4.4   -4.2828   CCGGACGGATGAAAA                TTCC AATG GGAA                 TCACGTGCCTGGCAG  67 199
TspCOW1_33340 3541344 .. 3541360 -  -4.3  -3.12351   GTTTTTTATATCGAA              CCGCCTA ACC CAGGCTG              GCCAGTTCGCGTTCG  45 13
        gidA 3536528 .. 3536542 -  -4.2  -3.75024   TCGCACCAGCAACAA               GCCC TTCTTCT GGGC               GACCCTGCAGCCGAC  54 468
TspCOW1_t00500 3524128 .. 3524165 - -19.9  -4.18018   GGCGGTGAGTGAAAA   GCAACGGGGCGGTACGC TGAT GCGTACCGCCCCGTCAG    TTAAAAATACTTTTG 100 89
        queG NONE
TspCOW1_33040 3506211 .. 3506229 -  -7.3  -3.34398   GCTGCCGGTCAAACA             GGCCGCG GCAAT CGCCGCC             GAGATCACCGGCGAG  54 333
TspCOW1_33020 NONE
TspCOW1_33010 NONE
        gmhA NONE
TspCOW1_32990 NONE
TspCOW1_32980 3501248 .. 3501258 -  -6.8   -3.4072   GACGCTGGAGGAGAA                 GCAG GTG CTGC                 TGGATCTGGGGATTG  56 121
TspCOW1_32940 3497246 .. 3497256 -  -8.2   -2.6544   CACGACAATATCAAG                 CGGG TCG CCCG                 GAACTGACCTTCTGG  53 47
TspCOW1_32800 3487091 .. 3487130 -  -9.8  -3.18737   CAACGAGGACGAATA  CGGCCCCGAGCCGCCCGAC GGC GGCGGT-GGCCCGGAGCAG  GACAAGTCCGACGAC  62 60
        algW 3480982 .. 3481010 - -10.1  -2.73468   GAAGATGGTCAAGGA        GGCCGTGGCCGGC AAG GCCGGGCAGGGCG        ACTCCGCCGCCCAGT  63 110
TspCOW1_32680 3475406 .. 3475425 - -12.1  -4.89567   CTTGAAAATAGAAAA            GGCCCGG GCAAAG CCGGGCC             TCTGCGGGTGGATCA 100 55
        argD NONE
        argF 3473066 .. 3473079 -  -3.7  -2.52464   CCGCTTTCTAACTCA               GCAGG AATT CCAGC                AGCGCCTTCTGGGCG  41 4
         ppk 3464744 .. 3464776 -  -6.2  -3.30701   CTTCATCAAACTCAA     CGCCCT-GCGTCTGCG CAT CGCCG-CGCGACGGCG     GCGGTGATTATAAAA  54 259
      pyrC_2 3455851 .. 3455861 -  -2.4  -3.85698   GTGGCGGCGGACAAA                 CCGG TGG CGGG                 ACTGGAGACGGCCGC  54 490
         rnt 3454388 .. 3454419 -   -21  -3.16191   GGAGACCCTGATCAA      TCCGTCATCCCGGC CTGC GCCGGGATGACGAA       AAGTGCGCCGGTATG 100 179
TspCOW1_32520 3453293 .. 3453311 -  -8.1  -3.07994   GCCAACCTGAGCGAA            CG-CGGCG TGCG CGCCGACG             AGCAGGGCGTGGCCG  54 424
TspCOW1_t00490 3444625 .. 3444644 -  -5.6  -3.14125   GCCACAGATGGAACA            CCTGGCGCG CTT CGCGCT-GG            AGTACAAGCGCATCG  49 236
TspCOW1_32380 3442860 .. 3442874 -  -2.1  -3.14211   ACCGCCCGCTACGAA              CTGGCC CTGT GGC-AG               CGGCTGGTCGCACCC  42 334
        pepA 3439047 .. 3439068 -  -4.3  -3.53444   TGAGCCTGGTTGAAA           CCTCAACGC AGAG ACGCAGAGG            CGCAAAGGCCGCATG  51 270
        holC 3438498 .. 3438509 -  -2.2  -2.67803   TGGCCACGAAACCCA                CGAA AATC TCCG                 GTCATGCATTGCCGG  38 108
        valS 3435549 .. 3435578 - -13.6   -5.7946   CCTTGAATAAAAAAA      CGCCGCG--GCCCG GGTG CGGGCGACGCGGCG       TTGTCAGGCCTGGCC 100 46
      rpfG_2 3434194 .. 3434210 - -10.1  -2.95388   TACCCAAGTGATACA              GGCGTCG ACA CAACGCC              GGAGGGGAGCGGAGA  64 48
       hemH2 3432759 .. 3432778 -  -2.9  -2.50291   AATCATGGCATGAAT            TG-CGGTT GTCGT AACCGTCA            TCGTCATCCCCGCGC  39 176
TspCOW1_32300 3431520 .. 3431565 -    -2   -3.4314   CAAACGCTAATAATA GTATCGTAGGTCGGATTA-GCCC GGA GGGCGTAATCCGACGT-CAGT-C ATTGAGCTGTCGGGT  46 68
TspCOW1_32290 3430028 .. 3430048 -  -3.9  -2.94099   TTGTTCCAGCAGAGA            TTGCAGGTG GCG CAGCTGCAT            GCGGATGTCCTCCCT  44 137
TspCOW1_32280 NONE
TspCOW1_32270 3428545 .. 3428574 -    -5  -3.05816   GTATGCGTGATTGAA       GTGCACCGGGC TGTATCCGT GCCCG-CGCAC       AGATCGCAAGCATCG  47 253
       glgC2 3426854 .. 3426876 -    -4  -3.41527   CAAGGCCTACGAGAA           CCTGGCCCTG GAT CAGAGCGATG           AACTGGTCTATATCG  49 432
TspCOW1_32180 NONE
TspCOW1_32170 3416364 .. 3416374 -  -2.4  -3.65224   AGTCGACTTCAAGAA                 CCGG GTT CCGT                 TCGTGGTGCTGCTGA  51 189
TspCOW1_32100 3410561 .. 3410576 -  -3.2  -2.91276   GGCTGGTGGAGAAAG              GCCG GATTGTAA CGGC               TGGGGCGGGGGGCGT  42 206
        proS 3408651 .. 3408688 -  -6.8   -3.4052   CGCCAACTGAAGGAA   CTCGGCATCCGCCTGCG CAAGC CGCCGGCGGCCGCGG-G   CGGCGAAGCGGCCGG  58 177
TspCOW1_32050 3404094 .. 3404108 -  -2.8  -3.95153   GCAATGACGGATAAA               TCAGAG GTT CCCTAA               GGGCTGCAGGCTCAA  58 37
TspCOW1_32020 NONE
TspCOW1_32010 3400619 .. 3400647 -   -11  -4.01939   TAACGGAGAATGAAA       CTGCCCGGCGACA TCCC TGTCGCCGGGT-G        AACCATCTCAGAATA  85 33
TspCOW1_31970 3396003 .. 3396035 - -12.8  -2.57974   ATGATCAGCAACGTA     GGTCGGGTTA-GCCC GACA GGGCGTAACCCGACA      CTGGGCCGCGGTTGT  71 171
TspCOW1_31960 NONE
TspCOW1_31950 3394289 .. 3394327 -  -7.3  -3.53811   GTCATCCCGGCGAAA   GCCGGGATCCAGACACC GCTGT GGTCACTGGATTCCCGC   CTTCGCGGGAATGAC  60 85
TspCOW1_31940 3393025 .. 3393041 -    -5  -3.53444   CCAGCCGCCGTTAAA              GCCTGC GGCCG GCCGGC              CGTTAAACTCGGTAG  53 379
TspCOW1_31900 3387492 .. 3387510 -  -2.4   -4.8048   GTCGCAGATGAAAAA            GCCGGTG CCGAAT CAC-GGC             TACCTGGTGCTGGTC  74 449
TspCOW1_31840 3382629 .. 3382656 -  -6.3  -3.04144   CGCGCACCGGCAAGA        TCGGCGACG GCAAGATCTT CGTCACCGA         GGTCGAAAAGGTCGT  49 278
TspCOW1_31790 NONE
        pilS 3376109 .. 3376136 -  -9.8   -3.5332   AAAGGTTGAAAGCAA        TGCCGCCGGCGCG CAG CGCGCCGGCTA-A        GATAATGGATTTGTC  69 79
        pilR 3374369 .. 3374381 -  -3.5  -3.48276   CTTTCCGGCATAGAA                TTAAT ATT ATTAA                AAACAGATAGATAAT  49 206
        pilE 3373777 .. 3373802 - -14.1  -2.64803   TTACGGGTAAAGCGA         GAAAAGCCCCC GTTT GGAGGCTTTTC          TCTGTGTGACTTATC  78 49
TspCOW1_31750 3371651 .. 3371663 -  -3.4  -2.74012   TTATCAGTGGAACCA                TCGT CGACC ACGA                TGATCTCATCAGCGA  41 145
TspCOW1_31740 3370705 .. 3370716 -  -7.2  -3.34192   AAGCTGCGCAATGAA                CCGC CACA GCGG                 CCTGATTGGCACTTC  54 224
TspCOW1_31710 NONE
TspCOW1_31700 3368650 .. 3368666 -  -4.3  -3.43961   GGAGAAGATCGAGAA              TGCGGCC CCG GAACGCA              ATATTGACGAAACTG  51 122
        pilB NONE
        pilC NONE
        pilD 3363695 .. 3363709 -  -3.4  -2.65298   TTGATCGATTATAAC               CCGGCG AAG CGCAGA               TAACCCTGGATGAGA  40 4
        coaE 3362690 .. 3362704 -    -7  -3.76224   GCGTGATGCAGGAAA               CGGGCC TTA GGGCCG               AATGACGCTTACTGA  63 171
        zapD 3361718 .. 3361746 -  -3.7  -2.54387   TAAAGCCTTAATGTA        GGATGGGTGAAGC GCA GCGCAACCCATCG        ATTTGTTGTCGTTTC  41 39
        yacG 3361391 .. 3361431 -  -7.6  -3.91549   ACAACAATAATATAA CCGTAGGTCGGGTCA-GCCC GAA GGGCGTAACCCGACAT-CTG TCCGCACAACTGTCG  68 97
TspCOW1_31570 3353855 .. 3353867 -  -6.2  -3.62224   ACACGCCCTGAACAA                CCGC CTGCT GCGG                GCCCTGCTGGCCGAT  56 188
TspCOW1_31380 3334074 .. 3334094 - -12.5  -3.44274   CAACTACAACAGCAA            TCGGGCGCC TGC GGCGGCCGA            GAGCCAGGGCGGCGG  73 199
        uvrA 3328934 .. 3328960 -  -7.1  -2.71144   GATCGCGGTCAACCA         GGGCCATGCCG CCACC CGGCTCGGCCT         GAGCCTGGGCGACCG  48 342
TspCOW1_30810 3277419 .. 3277462 -  -7.2  -3.06915   ATGGACGGCATCGAA CTCGGGGAGTTCAGCCGCCA TATG TGACGGCTGTTCGGCCTGAG CCGGGGTCAGCCCGG  54 32
TspCOW1_30780 3275615 .. 3275634 -    -2  -4.24002   GCGTAAACCGCAAAA            GGTTCAGG CGCG CCTGAGCA             CCCGCAGCCAGCGCC  59 9
TspCOW1_30760 3273356 .. 3273373 -  -2.5  -2.87211   ATCCGCTGTCACAGA             CCGGCGG CGGG CTGCTGG              TGGCCGCGCCCCTGT  40 375
TspCOW1_30730 3270174 .. 3270204 -  -3.9  -3.56092   CCATTATTTTGTAAA      TCCGTCATCCCGGC GAAG GCCGGGATC-CAGT       ACTGTAGGTCGGGTT  51 192
TspCOW1_30700 3267861 .. 3267871 -  -8.2  -3.48395   ACTTTGCCCATAGAA                 CCCC TGC GGGG                 TTCATTATGGGTACC  62 120
TspCOW1_30690 3265783 .. 3265802 -  -3.5  -4.89838   CCAATAAACACAAAA            TCCCCTC TCCCTT GATGGGA             GCACCCAAACAGCGG  76 275
TspCOW1_t00420 3263789 .. 3263805 -  -2.2  -3.53012   CCCGGCTGGGTGAAA              CCGTTT CCCGC AACCGG              CTCGCCGCCGGGGTG  48 56
TspCOW1_30620 3252177 .. 3252189 -  -5.5  -2.87881   GAAGGTGTCCATAGA                TCCCC CGT AGGGA                AGATGCGGCGCGGCG  48 44
        anmK 3250686 .. 3250696 -  -6.8  -3.66784   CCACCGGGAATACAA                 GGTC AAG GACC                 CGCGCGCCACCATCC  61 366
        yadQ NONE
TspCOW1_30540 NONE
TspCOW1_30530 3244134 .. 3244182 -  -3.1  -2.73721   AGTAAGGGGTAAGGA GTGAGAGGGGGAGGCGGAAAAA TCGTTT CTACTCCACCTCACTC-CTCAC TTCTGACTTTTCACG  41 36
TspCOW1_30520 NONE
TspCOW1_30510 3241731 .. 3241747 - -10.8  -5.75342   CTCTGCCAAAAAAAA              CGCGGG ACAAG CCCGCG              TTTTTTCACTCAGTA 100 50
TspCOW1_30460 NONE
TspCOW1_30450 NONE
TspCOW1_30440 3235192 .. 3235208 -  -2.9  -2.78596   GACCGCCTGATCAGA              GTTGCGG AAA CCAGAAC              CGGCCACCATCCGCT  41 4
TspCOW1_30410 NONE
TspCOW1_30400 NONE
TspCOW1_30390 3230523 .. 3230545 -  -5.6  -2.52464   TGTTGCTGGAACGCA          TCGGGGTGC TGGCGG GCAC-CCGA           GCCCGCGCCGATCAG  44 515
TspCOW1_30370 3228331 .. 3228343 - -10.5  -3.28924   GATGCTGTGCGAGAA                CGCCG ACC CGGCG                GTGCGGGCCGACCTG  63 282
TspCOW1_30350 3226149 .. 3226168 -  -6.4  -2.52464   GCGTCGCGTAACCCA            TCA-GGCCC GGC GGGCCGCGA            TGGGTTGCGGCGCGT  48 83
TspCOW1_30310 3224306 .. 3224320 -  -3.5  -3.18264   GGCCTGATGGAGGAA               CTGCA GGGTG CGCAG               GCCGCGCATCTGGAT  45 391
TspCOW1_30290 3222092 .. 3222109 - -14.1  -4.66537   TTTTGTAATAGAAAA             GGCCCGC TTGC GCGGGCC              TTTTTTCAGCGTTGA 100 52
TspCOW1_30260 3219277 .. 3219289 -  -6.9  -2.59564   GTTTCATGGGAGAAT                CGGCC GCA AGCCG                GAAAGGCTTTAGCCA  50 50
TspCOW1_30250 NONE
        fabA NONE
        fabB NONE
TspCOW1_30220 3215357 .. 3215376 -   -15  -4.72986   GACGGGGACGAAAAA            GGGGTGGC AATT GCCACCCC             TTTTGCTTGTCGGCG 100 75
TspCOW1_30190 3209590 .. 3209627 - -17.2  -2.74144   GGGTTAGCCTGAAAG   GCGTAACCCGACACAT GCCGCG ACATGTCGGGTTACGC    TGCACTGACCCGACC  87 52
TspCOW1_30180 NONE
TspCOW1_30170 3207650 .. 3207681 -    -5  -3.02144   TCACCGCGGCCAAGA      GCCCCGGCCTGG-TC TAC GATCCCGACCTGGAC      CGCCTGGTGGCCTGG  45 348
TspCOW1_30130 3199043 .. 3199080 -  -6.1  -3.01712   GGCGCTGGCCGAATA   CCGTGCGGCGGGGCTC GATGAGG GCGCAGCGCCGC-CGG   CGCAGGATTTCACGC  49 456
TspCOW1_30110 NONE
TspCOW1_30100 NONE
TspCOW1_30050 3190194 .. 3190221 -  -6.2  -3.55622   TTGAAGCGCCGGAAA        CAGCCACCTGGCC GGT GGTCAGG-GCCTG        GTTATCCACGGCATT  58 306
TspCOW1_30020 3183992 .. 3184004 -  -3.3  -3.61398   CGTGGGCTGGAACAA                CCGGA TCG TCAGG                GCAGCTTCTGGCGCC  49 209
TspCOW1_29960 NONE
TspCOW1_29950 3174938 .. 3174953 -  -6.8  -3.13403   GGTGGCCGATGAACA              CTGGCA TCCC CGCCAG               CAGGGCGAGGTGCTG  52 262
TspCOW1_29930 3173032 .. 3173066 - -12.1  -3.82378   ACCGACGGATAATAA    CAGTCCCCTCTCCCCG CTTG CGGGGAGAG-GGCCAG     GGTGAGGGGGTATAC  83 111
TspCOW1_29860 NONE
TspCOW1_29850 3161096 .. 3161126 - -10.5  -2.62667   TTAACCCTCAAATAC      TAGAGGGT-CGCGG TAAT CCGCTTACCCTCTA       CTCGTGTATGTCGAG  62 88
TspCOW1_29840 NONE
TspCOW1_29830 NONE
TspCOW1_29820 NONE
TspCOW1_29810 NONE
TspCOW1_29800 3157971 .. 3157981 -  -6.8  -3.33696   CCGCGGTGTAACGAA                 GCAG CCC CTGC                 TCAAGGTTCCTCGGC  58 63
TspCOW1_29790 NONE
TspCOW1_29780 NONE
TspCOW1_29770 3155576 .. 3155586 -  -2.4   -4.1021   GCCCACAACCAGAAA                 GGCC AGC GGCT                 CATGGACCAGCCAAA  59 107
TspCOW1_29760 NONE
TspCOW1_29750 3153253 .. 3153281 -  -3.9  -4.57073   GATTTCGGGCAAAAA        GAAACCGCA AGTCTGTCGGG TGCGGCTTC        CGCCTTGTGAAGGGT  70 86
TspCOW1_29740 NONE
TspCOW1_29730 NONE
TspCOW1_29720 3151974 .. 3151994 - -15.4  -2.85351   GGGTGGGATATGACA            GCCCCGCC GCAGG GGCGGGGC            AGGTGCAGGATGGAA  83 49
TspCOW1_29710 3150996 .. 3151028 -  -6.2  -3.67792   GGACACGGACGCAAA     GCCTGAGCAGCTGCAG GGG CTGCTGCAGC-C-GGC     CTCAGGAGAGGGATG  59 521
        hemA 3139804 .. 3139824 - -12.5  -3.05384   GTGCGGGCGAGGGAA            GGTCGCAGG TGG CCTGCGGCC            ACCGGTTCCTGGGTA  76 91
        prfA NONE
        prmC 3137776 .. 3137789 -  -2.3  -3.39895   CGGGGCAGGAATCAA               GCAGA ATTG CCCGC                TTCAGCCGCTGCCGG  46 27
TspCOW1_29550 3137254 .. 3137299 -  -2.6  -3.53811   GTCATTCCCGCGAAA GCGGGAATCC-A-GTGC-CTGGC AGG GCAAACGCGCGTTGGATCCCCGC CTTCGCGGGGATGAC  47 60
        moeB NONE
TspCOW1_29530 NONE
        yjdF 3134783 .. 3134814 - -11.4  -3.25719   GGACGAGACCAGCAA      CACCGGCCTGCTGG ACAT CCTGCCGGCCAGCG       CCACCAAGCTGGGGG  68 438
TspCOW1_29500 3133501 .. 3133518 - -12.7  -2.52464   GCGGTGGTCAATGGA             TCCCGGC ATGC GCCGGGA              TGACGGGATTCCTGG  71 223
        mreB 3128394 .. 3128412 -  -7.4  -3.37245   GGAGGCGAAGACGAA             GACCACCA GCC TGGCAGTC             AGGGAGGGGCCTTGT  58 258
        mreC NONE
        mreD NONE
        pbpA NONE
TspCOW1_29420 NONE
       sltB1 NONE
TspCOW1_29400 3121927 .. 3121957 - -16.8  -2.64354   TCAGACATTGATAAC       GGGGCGGTCGCGAC GAC GTCGCGAGAGCCCC       TAGTCTACCACGACG  85 25
TspCOW1_29390 NONE
TspCOW1_29380 3119570 .. 3119580 -  -8.2   -4.4017   GCAAGCGGGACAAAA                 GCGC GAA GCGC                 GTTGAACGCCGGCAC  77 191
TspCOW1_29330 NONE
        lipB 3112045 .. 3112059 -  -4.2  -2.69598   ACGGGGAGAAAAATT               GCCG ATTCCCG CGGC               GGGGCGGGGTGTTGC  42 41
        lipA 3110879 .. 3110894 -  -5.4  -3.87438   ACAAATATCACGAAA              TGCAAC GGTC GTCGCA               CAATTGTTCCACGGC  61 198
TspCOW1_29300 NONE
TspCOW1_29290 3110050 .. 3110065 -  -3.2  -2.85574   GTAAGGCGATGAAAT              GTACAG CGTT CGGTAC               CAGGTCTATATCAAC  41 31
TspCOW1_29280 NONE
TspCOW1_29270 NONE
TspCOW1_29260 NONE
TspCOW1_29250 NONE
TspCOW1_29240 3103397 .. 3103418 -  -4.3  -3.01712   CCCTGCTGGGCAAGA           TCGGTTACG GCAC CGTCGCCGA            ATGCGCGGTCAATTC  45 272
        lptD NONE
        surA NONE
       pdxA1 3089010 .. 3089051 - -11.6  -2.74792   GGATCAGCCTGAAAG GCGTAATCCGACACCGCGC GCGGA GCCCG-CGTCGGGTTACGC TGCGCTAACCCGACC  66 71
        rsmA 3088047 .. 3088093 -    -6  -3.28712   CCTGCGGTTCCATAA GATG-TAG-GTCGGGTTA-GCCC GATA GGGCGTAACCCGACACTGGCTTC CGCATGTCGGGTTAC  54 92
TspCOW1_29120 NONE
TspCOW1_29110 3086981 .. 3086995 -  -9.2  -2.62613   GTCGATCCGAAATAC               CGCGGC TGA GCCGCA               TCCGGAGGCTACGCG  60 367
         pgl NONE
         glk 3084846 .. 3084867 -  -2.1  -4.56597   CGCGTCTGCCAAAAA           CGGATCGAA TAAC CCCGGCCCG            GAAGCGGCAATGGCC  66 60
        apaG 3084298 .. 3084311 -  -3.8  -3.35992   ATGCACCGGAATGAA               CCGA ACAGTG TCGG                ACGAATTTCACTGCT  49 118
      apaH_2 3083166 .. 3083176 -  -3.2  -3.05844   CGCCCCAGGGCAAGA                 CCAA ACG CTGG                 TGGTGGCCCTTCGAC  43 215
TspCOW1_28950 3072591 .. 3072604 -  -8.1  -3.63569   GGAATTTGTGAAGAA               GGCCT GATC AGGCC                AGTGCCTCGCGGAGT  62 19
TspCOW1_28930 NONE
TspCOW1_28920 NONE
TspCOW1_28910 3070319 .. 3070350 - -10.2  -2.63079   CGTGTAGAGAATGTA      GGTCGGGTCA-GCCT GCA AGGCGTAACCCGACA      TCCCGCGGCAGCTTG  62 66
TspCOW1_28770 NONE
TspCOW1_28760 3052903 .. 3052935 - -13.6  -3.53224   CATGTGCCGCGGAAA     GTGTCGGGTTACGCCC TGC GGGC-TAACCCGAC-C     TACGAATACATTGTT  83 472
TspCOW1_28750 3052106 .. 3052157 -  -5.1  -3.56643   CGCAGAGGCCGCAAA GGCGCAGAGACGCAAAGATAT TTATTATTCG ATTACTCTGCGCCTCCGCGTC TCTGCGTACTCTGCG  53 41
TspCOW1_28740 3051419 .. 3051450 -  -5.7   -3.4252   TGGTATGCATCACAA      CGGCCTCCTGCGCC TTCCG GGCGC-GATCGCCG      GCATCGATCGGGATG  53 157
TspCOW1_28730 3050993 .. 3051015 -  -5.4  -3.01712   TTTCTGGGCTGAAGA           TCAGGAGCGC AGA GCGCCACGGA           ATACACGGAAAGCAC  48 202
        rpiA 3048300 .. 3048310 -  -8.2  -2.90212   TTATTATTGGAGAGA                 GCCG AAG CGGC                 TTCGTCTGGCCTTAA  56 192
        coq7 3038402 .. 3038423 -  -7.3  -2.79831   GCAACCGCTACCAGA           TGATCGACG TCAA CGTCTATCA            GGAGCACAGCTTCCA  48 352
         vfr 3035468 .. 3035487 -  -4.8  -2.95192   CTGAAGGGCATAAAG            GGCCGCCC TGAA GGGCGTTC             AACGCGCTGCGCGCT  46 161
TspCOW1_28530 NONE
TspCOW1_28520 3027353 .. 3027367 -  -2.7  -3.13522   ACGCTGCCATCAATA               GTCGC GGCGT GCGTC               GGGTTACGCCTTGCC  41 100
TspCOW1_28500 NONE
         nfi 3025091 .. 3025113 -  -7.6  -2.70932   CCGCCTGTGTAACGA           TGGGTTGCGC TGC GCTCCACCCA           TCCTACCCGATCTGA  54 28
TspCOW1_28480 3024662 .. 3024678 - -10.8  -5.79526   ACAGGCGAAAAAAAA              CCCGCC GCGAG GGCGGG              TCGAAGGAGGATTCA 100 57
TspCOW1_28440 3018336 .. 3018383 - -16.8  -2.78384   CGCGGCGGTATTACA GGGGGCAGGGGCCATGCCCGGG TTTT CCCGGGCATGGTCCCGTCAGCC CTGACCCCGGGGTCA  87 38
TspCOW1_28400 3014855 .. 3014893 -  -3.7  -3.01712   CGGCTCGGCTGAATA  TCCGC-GCGGCCGGCTCAG AAA CCGA-CCGGACGCTGCTGC  GCGAAGCGGAATACC  44 1
        hspA 3009833 .. 3009874 -  -6.5  -3.16742   TCTAACCGTGATCAA GCTGCGACGGCCGGGC TGGTTGATGGC GCCCGGACG-CGCAGG CGTCCGGGTAGGCGT  52 52
        cbpA NONE
TspCOW1_28320 NONE
TspCOW1_28310 3007926 .. 3007940 -  -2.2   -4.7254   AGTTGGCATTAAAAA               TTATCT ATT AAATAA               TCATTATTCCGACAA  70 82
TspCOW1_28300 3007223 .. 3007243 - -18.3  -5.67063   GGCATCACAAAAAAA            GGGGGCGCA TGG TGCGCCCCC            AGGGGGGTGGAGGAG 100 59
TspCOW1_28290 NONE
TspCOW1_28280 NONE
TspCOW1_28270 3004119 .. 3004163 -  -6.2   -3.5525   ACAGAGGTTTGTAAA GTCGAGCGGCGAGCGGCCGCT ATGC AGGGACCGACCGCGGC-CGCC TGGGCCGGTCGGTTG  58 467
TspCOW1_28250 3001715 .. 3001744 - -20.1  -2.70932   CCTTTGTCTGAATCA       CCGTCATCCCGGC CTGC ACCGGGATGACGG        TAGGTGGGGCCTTGA 100 416
        modA NONE
        modB 3000245 .. 3000259 -  -2.7  -2.82156   ATCGAAACGGAACCA               CAGGC TCATG GCCGG               CCCAGTCCGAAGCGG  39 16
TspCOW1_28210 NONE
        srkA 2997680 .. 2997716 -  -7.2  -4.14243   CAGCGGACGTTAAAA    GTTCCACGTCATTGCG AGGAG CGCAGCGACGTGGCAA    TCTCCCAAAGATACA  71 490
TspCOW1_28170 2995774 .. 2995791 - -14.1  -3.12351   TCCCGGGACACGGAA             GGGCGGC TGCG GCCGCCC              TTTTTTGTGTCTGCT  83 328
      metK_2 2985411 .. 2985440 -  -6.3  -3.86015   CATGGTTTTCAGAAA       CCTGGATGCCCGT CTGC ACGGGCATGACGG        ATTGAATTCAATGCA  64 33
      ahcY_2 2983686 .. 2983725 -    -8   -2.7535   TGGTTGAAGACAGTA GGCGATGGCGGGGCGACGGC GTCT GCCGTCGCC-C-C--TCGCC GGTGTTTCAAACTGC  54 45
        metF 2982780 .. 2982808 -  -9.5  -3.07816   CGCCGAGGTATGGAA        GGATCCGTCAGTC CCT GACCGGCAGACCC        AGGTTCTTCCAGATG  64 4
TspCOW1_28050 2981792 .. 2981809 -  -5.5  -3.14931   GGTACTGGGTACCAA             CTGAACC TGAC GGTTCTG              CCTCCTCCTTCATGA  49 124
TspCOW1_28010 2977669 .. 2977683 -  -5.6  -2.56095   TTGAGATGCAACTCA               GGGCAG GGC CTGGCC               GCCGATTCTCAGGCG  46 8
TspCOW1_27910 NONE
        gshB NONE
TspCOW1_27890 NONE
TspCOW1_27880 NONE
TspCOW1_27870 NONE
        tonB 2958478 .. 2958506 -  -7.3  -5.00616   CCGCTGGGCAAAAAA        TCAGCCCCAGCCC GGA GGGTTGCGCCTGA        GACAGCGCCACTCGT  87 292
TspCOW1_27850 NONE
TspCOW1_27840 NONE
        pyrR NONE
      pyrB_2 NONE
      pyrC_1 2954402 .. 2954414 -  -4.8  -4.14874   AGAACACTTGGAAAA                CGGT TATCC ACCG                CTTTCGGAAGCCGAT  64 207
        pyrK NONE
TspCOW1_27790 2953025 .. 2953047 -   -12   -3.3197   AGAGGATGTGGACAA           GCTCGGCGAT GCC ATCGCCGACC           TGGAGATCGACAACT  68 109
TspCOW1_27760 2949843 .. 2949853 -  -8.2  -3.14132   TGCCGGTGTCATCAA                 GGCG GCA CGCC                 ATCAGGGGGTGGACG  57 11
        proC NONE
TspCOW1_27740 NONE
TspCOW1_27730 2947913 .. 2947931 - -13.8  -2.75022   TCCTCCAGACAGAAT             CCACCGGC CGT GCCGGCGG             CGCGACTCCCTATAT  76 180
TspCOW1_27720 2945853 .. 2945885 - -15.6  -5.40072   TGCGCTGGAAAAAAA     TC-CGGCGCCGGACC GATG GGTCAGGCGCCGTGA      CTGAAGCGCGGCGGT 100 52
TspCOW1_27710 2945253 .. 2945281 -  -5.2  -2.70932   TCGGCGTGGTAATGA       TCGGGCGATC-GC TGTG GCAGTTCGCCTGA        GGGCCACCTGCCATT  47 85
        pyrE 2942824 .. 2942848 -  -3.4  -3.49924   CTGAAAGGAGGATAA          GCGGGGTCCG GGCCG CGAAAGCCGC          CTCAGAGCCGAATGG  49 258
TspCOW1_27660 2940816 .. 2940832 -  -7.9  -3.41745   TTCCTACAACATCAA              CGCCGAC CTG GTCGCCG              GCAAGGTGGCCGAGG  59 438
TspCOW1_27610 2934862 .. 2934906 -  -9.2  -2.60212   GCATTATGTCAGAAC CCGGGCGACGG-GGCAAGCATC CCC GATGCCGGTCGCCGGCGCC-GG CATGCGGCGGCAACT  60 48
        rpmB NONE
        rpmG 2934321 .. 2934359 - -27.8  -3.14931   GGCAGGCGTGACCAA   CCCAATAAAAAACCCGGC ATG GCCGGGTTTTTTATTGGG   TCCGGTGATCGGAAG 100 43
TspCOW1_27570 NONE
TspCOW1_27550 NONE
TspCOW1_27540 NONE
TspCOW1_27530 NONE
TspCOW1_27520 2925133 .. 2925161 -  -8.7  -3.80174   ATACGCCGATAAGAA        CGATGGCCGCATC CTG GGCGCGACCTTCG        TCGCCGCCCTGGCCG  68 418
        mutM 2923000 .. 2923040 - -19.2  -3.08679   GGCCCTGATTGAACA TGTAGGTCGGGTTA-GCCC GTGA GGGCGTAACCCGACCTACC  TCTGGCAATGGGGGC 100 21
TspCOW1_27410 2913667 .. 2913687 -  -8.1  -4.19336   AATGACGGTAACAAA            GGCGGGCAG TCT CAGGCCGCC            TCGCTGTCGTCGGTC  74 16
        ftsE NONE
        ftsX NONE
TspCOW1_27380 2910338 .. 2910351 -  -2.3   -3.3014   AAAAAATCAATAAAT               CAGGC GCAT ACCCG                GTTACGGCCGGTTTC  44 11
        rpoH 2909312 .. 2909341 - -22.3  -2.87931   CGGATCCCGCACACA       CGAAAACGGCCCC GTTC GGGGCCGTTTTCG        TTTCCGTGACTGCCT 100 47
TspCOW1_27350 NONE
      msrA_2 NONE
TspCOW1_27330 NONE
TspCOW1_27320 2906633 .. 2906645 -  -4.7  -4.56597   CCGGGTGGGTAAAAA                TCCCG GAG CGGGC                GGCGCCGCCGGCCTG  72 43
TspCOW1_27310 2906056 .. 2906077 -  -7.1  -5.10208   GAATCCGAAGAAAAA           GGGCCGGGG CGGG CGCCGGCGC            TAGAATTCACCTGCC  90 32
        cynT NONE
        gufA NONE
TspCOW1_27230 2899830 .. 2899847 -  -4.9  -3.30006   ATCAACGGACAGCAA             CTC-AAGG TGA CCTTCGAG             TATGCCAATGTTGAC  49 68
        tsaA 2890721 .. 2890736 - -11.8  -5.68489   GACAACAATAAAAAA              GCCGCC CGCA GGCGGC               TTTCTTTTGGGCGAT 100 52
TspCOW1_27030 2884464 .. 2884516 -  -4.8  -4.02733   CAAAACACATAACAA GGCGCTCGTTCGGACGCAAACTACGC TGC GCTTCGTTTGCG-CCGCAC-AGCTTC AGCGTTAGGCCACTG  62 197
TspCOW1_26840 2866786 .. 2866798 -  -4.7  -4.09963   GCTGAAGAAGAACAA                CCGCG GTG CGCTG                GTGGGCTGGCTGTTC  62 416
        comF 2855790 .. 2855810 -  -2.3  -2.57132   GCGTTCCGGGACAAT            CCCCGGCCG CTG CTGCTGTGG            GCCGCCCTGATCACG  38 161
TspCOW1_26600 NONE
TspCOW1_26590 NONE
         rph NONE
TspCOW1_26570 2841407 .. 2841420 -  -4.5  -3.61715   TAGTGTCGGTAACAA               CTGCA CTAA CGCAG                AGACGCAAAGGCACA  53 192
TspCOW1_26560 NONE
TspCOW1_26550 NONE
TspCOW1_26540 2839696 .. 2839737 - -13.7  -2.83517   ACGGACATAATACTA TCAGTCTGCTGCCCTGGCGC TGC GCGCC-GGGCAGCAGAACAT GCGTTGCATGCATGC  76 72
TspCOW1_26520 2837713 .. 2837738 -  -3.1  -2.84013   CAATGATACGGAAAT         CGGACCGGGCT CACA AGCCCTTTGCG          TCGCGGCGGGCGAAG  41 10
        rpmE 2837371 .. 2837403 - -22.8  -3.17723   GCAGGCCGAACGCAA     CGAGGGCGCAGCCGG TCAC CCGGC-GCGCCCTCG      CTGTCAGTGATCCAA 100 65
TspCOW1_26500 NONE
TspCOW1_26490 2835003 .. 2835060 -    -5   -2.9665   GCAAAGGGCACAAAG GCGCAGAGTCG-CAGAGAGAATGGAAAG CTGG CCTTA-ATTCTTCCTGGCGCCTCTGCAC CCAGAGGGCAGTAAC  46 74
TspCOW1_26480 2833455 .. 2833471 - -10.8  -3.05463   AGCCGGCCGATGGAA              CGCGCC GGGCT GGCGCG              GGTGGAGGCGCTGCT  62 224
TspCOW1_26450 NONE
TspCOW1_26440 NONE
        pilO NONE
        pilP NONE
        pilQ 2825119 .. 2825144 - -13.3  -4.59342   CCGACCAGAAATAAA         TTGCCCGGCAT TTTC ATGCCGGGCAG          GTATGCCAGAAAAGC 100 57
        aroK NONE
        aroB NONE
TspCOW1_26380 NONE
TspCOW1_26370 NONE
TspCOW1_26360 2820133 .. 2820170 -  -3.3  -3.71378   GATTCGATAGGCAAA   CCCCGAGCGGTCGGCA AGTATAG CGCCG-CCGATCAGGC   GGTTCAAACCGACAT  52 88
        gltB NONE
TspCOW1_26340 2813733 .. 2813758 -  -3.1  -3.02984   GGAAAATGGATAAAC         CGCCAAGGCGCC AAG GACGCCA-GGAG         ACTATAAAACAAGAG  43 169
        hemE NONE
TspCOW1_26320 NONE
TspCOW1_26310 2809340 .. 2809373 -  -7.3  -2.52795   AACTGCGCTAATGGA     CTCCGTCATCCCCGC GAAG GCGGGGATCCAGAAG      CCGCGGCGGGATATG  50 129
TspCOW1_26280 NONE
TspCOW1_26270 NONE
TspCOW1_26260 2804336 .. 2804364 - -16.1  -3.85698   TTGGGGTTGCAGAAA        CAAAAAGCCCGGC GCG GCCGAGCTTTCTG        TCGGGTCGTGACTGC 100 55
TspCOW1_26250 2803158 .. 2803172 - -12.8  -3.86822   TAACCCGGTTATAAA               CCGGCG CTC CGCCGG               GCGTGTACTCGGGGT  87 81
        priA 2800468 .. 2800478 -  -4.6  -3.25823   CGCCGGCGACAGTAA                 CGCC AGG GACG                 CAGAGGCGCAGCGAC  49 99
        argS NONE
TspCOW1_26220 NONE
TspCOW1_26210 2795709 .. 2795719 -  -8.2  -2.56164   GCTTCAATGACGAAT                 CCGG ACC CCGG                 CATGGAGATTGCGCT  53 3
TspCOW1_26200 2795188 .. 2795207 -    -5  -2.96274   TCTGGGAGAAGGAGA            GCTCCA CCTTCCCC TGGAGC             TATGACGCCACCGAG  45 205
      speE_2 2790985 .. 2791012 -  -2.7  -3.35046   GGAGGCGGTGAAATA        CCAGATCATGA TCATGT TCCTGATCTCG         GTGGGGACGGGGCTG  46 327
TspCOW1_26120 2785238 .. 2785254 -  -9.4  -4.89054   TCTACAAAAAAAGAA              CCCCTC ATCCA GAGGGG              CAGGGGTGGGGCTGT 100 92
TspCOW1_26090 2781017 .. 2781032 -  -4.7   -4.0348   ATACGACATGAGAAA              GATCG CCTGGT CGATC               AGATTCGTCCGCTCA  62 385
TspCOW1_26040 2773632 .. 2773660 -  -7.3  -2.90212   GGAGTATTGCAGACA        GGGTACGGCAACA GAA TGTGGCCGTTACC        GTTTGTGGTCCGCAC  53 162
TspCOW1_26030 2772773 .. 2772789 -  -7.9  -3.34344   GCAGTCCGGAATCAA              GAGGCCG CGG CGGCATC              AGGCGTCCCACAGGT  61 24
TspCOW1_26020 2772066 .. 2772104 -  -2.3  -3.54129   CATACCGTCGCGAAA  GTTTC-GCAGCCATCC-GC AAG GCAGGCTGGCCGCTGATTC  AGTACCGAAGGGCCG  47 46
TspCOW1_26010 NONE
        tspO 2769785 .. 2769834 -   -18  -5.14563   TGCCTGAGTAAAAAA GGCCGCCCCCGGTGCAG-TGCC TGTGACTC GGCAGCTAC-CCGGGGGCGACC CGTTGATCAGTCATT 100 139
         rnk 2769039 .. 2769064 -  -4.5  -3.19192   CTGGATCGAATTCAA         CGCCCGCTTCC GGCT GGAGGCGCCCG          GTCCGGACGATCCGC  47 305
TspCOW1_25970 2768243 .. 2768279 -  -2.8  -3.15961   GAAAAGATTATTTAA    CCCTATCTCCTCCCCC TTGAC GGGGGTACCCATAGGG    CATAACAAGGATGGG  43 65
TspCOW1_25960 2767764 .. 2767778 -  -2.1  -2.75064   GCCGGCAGGCAATGA               CACAG ATCAG CTATG               GGCCAACAGGCGGTC  39 17
TspCOW1_25950 NONE
TspCOW1_25940 2764248 .. 2764272 -  -5.5  -4.84017   AAGGTGGGAGAAAAA          CGGGGCCTGAA GGC TGCTGCCCCCG          GCGGAGGGTGTTCGC  79 141
TspCOW1_25930 2763326 .. 2763336 -  -8.2  -3.23274   GCGCGGATAATGCAA                 GCCG GCG CGGC                 GGGGACGGGGTGATG  59 54
        mdoG NONE
TspCOW1_25910 NONE
        mdoH 2758984 .. 2759019 -  -2.5  -4.33258   ATGGTGAAACAGAAA    CAACATCAGCGGC GTCGGAACTG GCAGCGGATGCTG     GTGGCCGTCACGGGA  65 268
TspCOW1_25880 NONE
TspCOW1_25870 NONE
         pcp 2756879 .. 2756905 -  -7.3  -2.52023   CAGTGACACCAAGAC        CCGCC-ATGTCG GCAT CTACATCGGCGG         CGGCCGATTCATTCA  47 133
TspCOW1_25840 NONE
TspCOW1_25830 NONE
TspCOW1_25820 2754457 .. 2754485 -  -5.9  -3.01712   GCGCGGCCTGGAAGA        GATCGAAGGCGAG GTG CTGGCCGCCAATC        AGGAGATGCTGGCCA  49 101
TspCOW1_25800 2750753 .. 2750768 -  -3.2  -3.30771   CCACAGCCCGGATAA              GCCAAG GTAT CTTTGC               CGGTATCCGTAAGCA  45 112
TspCOW1_25790 2749818 .. 2749830 -  -6.9  -3.28712   GGGCTCGGTGGAGAA                GGCGC TCA GCACC                GGCACCCTGTGGGCG  54 482
TspCOW1_25730 2744914 .. 2744964 -  -6.2  -3.88583   GAAAGCCCGGACAAA GC-GCTGTAGGTTGGGTTA-GGCGC GACA GCGCCGTAACCCAACGAGC-GCAGC CTGAATGTTGGGTTA  64 105
TspCOW1_25710 2742845 .. 2742855 -  -8.2  -2.57931   TCCACCTGGCAGAAC                 CCGG ATA CCGG                 CTATCAGTATGCGGT  52 189
TspCOW1_25690 2741161 .. 2741191 -  -3.9  -2.91264   CGGGTGATGGAGAGA       TCGGACAGGATCA TCCGT CGCTGCCGTCCGA       GTCCAGCGACTGCAG  44 5
TspCOW1_25680 2737726 .. 2737752 - -16.7  -3.05596   GATTCGCGCAGCGAA         GGCAAGGCCAT TTAAC ATGGCCTTGCC         AGAGGCGAACGCCCG  89 340
TspCOW1_25650 2736083 .. 2736107 -   -15  -5.14563   CCGGGCATGAAAAAA         CCCCGCCGCGG TCAC CCG-GGCGGGG          TTTTTTTCATGCCCG 100 51
TspCOW1_25620 2731523 .. 2731542 -  -9.2  -2.71011   ATCGTCCGTGAACGA            TGCGGCGC CGGC GCGCGGCA             GTCAAGCCGCGGCCC  61 44
        sprT NONE
TspCOW1_25600 2729014 .. 2729027 -  -3.7  -3.01712   GCCTTTGCGCCAACA               CTGGC AGCC GCCTG                CACCTGGTGGAGCCG  44 400
       pyrDB 2727665 .. 2727682 -  -3.3  -3.00498   TACATGTCACAGATA             TCGGACGC AGC GCG-CCGC             GCTTTATAGTGCGGC  42 108
TspCOW1_25570 NONE
TspCOW1_25560 NONE
TspCOW1_25550 NONE
        mshL NONE
        mshM NONE
TspCOW1_25520 NONE
TspCOW1_25510 2720352 .. 2720368 -  -3.7  -3.57263   ACGCGGAGGCGCAAA              GGCAATA TAA TATTGCA              CAGCCTCTTCGCCTG  51 176
        mshG NONE
TspCOW1_25490 2718455 .. 2718476 -   -13  -4.18018   GCCCGGGACGCAAAA           GGGTGGGC ACGATG GCCCACCC            TCTTGCACGCACTTA  93 65
TspCOW1_25480 2717831 .. 2717881 -  -8.9  -3.40597   GCCTGTATGGAAAGA CTCTGACGACCCTGTCAACCCGGC GCAG ACCGGGTTGAACCGGCCG-CAGCG GTTACTGGATCCCGG  64 121
TspCOW1_25470 NONE
TspCOW1_25460 2716656 .. 2716686 -  -5.2  -2.64933   GACGCACTGAGATCA       GCCCAGCGCCTG CGTCATC CCGGCGCAGGCC       GGGATCCAGAATCCG  46 118
TspCOW1_25450 NONE
TspCOW1_25440 2714140 .. 2714161 -  -4.4  -3.09327   CCAGTCCAGTCAATA           GCGCACAT GTCGGG ATACGCGC            AATCCTGCCGGCATA  47 209
        glyQ NONE
        glyS 2701062 .. 2701102 -  -6.3  -3.72893   GATGGGTGGAGCAAA GC-GCAACCCATCG-TTGA GCAGT TCATTCGATGGGTTACAGC GCATGGCGCTTCCAC  61 129
TspCOW1_25320 NONE
TspCOW1_25310 NONE
TspCOW1_25300 2699400 .. 2699418 -  -7.4  -3.23638   CGAAAGATTGAGGAA             GATCGCGA ATT TTGCGATC             AATCATTAGTACCGC  56 24
        rpmH NONE
        rnpA NONE
TspCOW1_25230 NONE
        yidC 2690371 .. 2690419 -  -5.4   -2.7795   GAAAGCACGGAATTA TTTATGCTCTCATTGCCATGGCGC TGC GCGCC--GGCAATGATAGAACAAG GTTTACCATAATTCT  47 94
        mnmE 2688872 .. 2688930 -   -38  -2.60032   TGCTCTCCAAAAAGG GTCCTCAAAAGGGGTCGGTGACAAATGA GAA TCATTTGTCACCGACCCCTTTTGAGGAT CACCGGCCTCTTTGG 100 68
TspCOW1_25200 2688326 .. 2688336 -  -3.2  -2.80612   CGGAACCGGAACAAT                 CACA GCA TGCG                 TTGCAATACATCGTC  41 14
TspCOW1_25190 2686658 .. 2686694 -  -8.6  -2.50492   CACGAGCATTAATAC   CGTCTGCTGACCGCCCC GCCC GGGGCGGTCA-CGGCCT    TTCCTGTCTCCCCAT  57 17
TspCOW1_25130 2679701 .. 2679713 -  -3.3  -3.13784   AAGGAAATCTTAAGA                GACAG AGC CGGTC                ATTCTATGCAGCCCC  43 73
        mnmG NONE
        rsmG 2676986 .. 2676996 -  -6.8  -3.35679   GCTTGCTATGGATAA                 GACC GTA GGTC                 GGGTTAGCGACAGCG  58 118
        parA NONE
       spoOJ 2675084 .. 2675133 - -12.2  -3.63515   TGTCATTGCGAACAA CGCGAAGCAATCTCGTACAGCA GGCTCA TCCGGTTGGAGATTGCTTCGCG TTGCTCGCAATGACG  77 61
TspCOW1_25080 NONE
        atpB NONE
TspCOW1_25060 NONE
        atpF NONE
        atpH NONE
       atpA2 NONE
        atpG NONE
        atpD NONE
        atpC 2667687 .. 2667721 - -22.2  -3.53012   TCCGGGTGGCGCAAA     CGAACAGGGGGCAGCC GTT GGCTGCCCCCTGTCTG     CTTTGCCGTCATTGC 100 124
TspCOW1_24990 2666990 .. 2667014 - -15.7  -2.52464   CTGGCGGTCAATTCA          GCCCCTCTCCC TCC GGGAGAGGGGT          TGGGGTGAGGGGATC  84 154
        glmU 2665414 .. 2665430 -  -5.1  -2.77678   GAACATTTAACACCA              TGCAACC TAC AGCTGCA              TCCCTAGCATCATCG  44 179
        glmS 2663070 .. 2663104 -  -3.4  -4.22338   ATCAGAAGTTGAAAA     TCAAGCTGGAGATTGA TGC TCATCCCCCGGCCGGA     TCAGAGTTTGATTAT  63 428
TspCOW1_24940 2661577 .. 2661592 -  -5.4  -4.37067   CAAATACTATGAAAA              CAAGCC TATA GACTTG               CCAGAAAAGTTTCCT  72 102
TspCOW1_24900 2658885 .. 2658914 -  -3.3  -4.05033   GGTACTGTACATAAA       CATGGCCCGCGAC GTCT GCCGCCGGCTGCG        GGCCGCCGATCAGCG  59 313
TspCOW1_24880 NONE
TspCOW1_24870 2657305 .. 2657315 -  -6.8   -2.8805   ATGACTTGGGACATA                 GGAG TCT CTCC                 TCATATCTCAAGGCC  53 183
TspCOW1_24860 2655892 .. 2655902 -  -8.2  -4.08945   AGGATGCCGTCAAAA                 CCGC TCC GCGG                 CAACGCCGGGCGTCA  71 38
        scrK NONE
         sps NONE
        spsA 2650067 .. 2650079 -  -3.3  -2.78816   GCATCCTGCAGCAGA                CCCAG GAG CCGGA                GCAGATTCTGCAACA  41 197
TspCOW1_24810 NONE
TspCOW1_24800 2648473 .. 2648527 -  -7.1  -4.42639   AGAGCGGAAGGAAAA GC-GCCGCAGCCTCAGCATG-CACGAT GGC ATCGCGCCCTGGTGCGACTGCTGCAGC TGCGAGGCCGAGCCC  75 303
TspCOW1_24770 NONE
TspCOW1_24760 2644858 .. 2644868 -  -8.2  -3.91473   ACAAATCGGGAGAAA                 GGCG AAA CGCC                 AGTGCGATTGGCGGG  68 426
        btuB NONE
TspCOW1_24740 NONE
TspCOW1_24730 2640920 .. 2640938 -    -8  -2.66695   CGCGGCAGCAAACAT             GGCGCCGG CCC CCGGCACG             GCTTCGATTTGAACA  53 113
TspCOW1_24700 NONE
TspCOW1_24690 2637585 .. 2637624 -  -2.5  -2.63252   ATCCGGGAAGAAGAT  TTGACGCCATGGCGACG GATTCA CGCCGCCTGGGCGGCGG   GATCCGGAGCTCAGA  38 36
TspCOW1_24680 2637156 .. 2637176 -  -9.7   -5.9873   GCAGGACAAAAAAAA            CCCCGCA GAAAAGG TGCGGGG            TATAAAAACGCTTTT 100 121
TspCOW1_24600 2630440 .. 2630451 -  -3.6  -3.57144   GGTTTCATCTTCAAA                CCGC AAAG GCGA                 AGAAGGCGCGCGAAG  51 167
        comM 2628786 .. 2628807 -  -6.5  -3.21276   CGGGCCGGCATAACA           CCCGG-ACTG AGG CGGTTCCGGG           CCTGTGCCTGATTTC  54 101
TspCOW1_24580 2627877 .. 2627902 - -10.4  -3.01712   GTTTCGGCGCCAACA         GCCGCGCGGCG CTGAT CACC-CGCGGC         CTGGTGGAAATGATG  60 418
TspCOW1_24520 NONE
        gpmI NONE
TspCOW1_24500 2622506 .. 2622518 -  -3.3  -2.92003   ACAACAGGCTATATA                CACAG GTC CTGGG                TGCGACCTTAGCACA  42 84
TspCOW1_24490 NONE
TspCOW1_24480 NONE
        thiJ 2619577 .. 2619614 - -14.2  -2.78384   GGTCGGGTTAGCACA   GCGTAACCCGACAGGC CACGGC GATTGTCGGGTTACGC    CTTTCAGGCTAACCC  80 174
        hdfR 2611982 .. 2612006 - -10.8  -2.56426   CAACATCGAGAACAT         CACGCCGGTAG GCAG CTAC-GGCGTG          CAGCTGCATTTCGAC  59 369
TspCOW1_t00350 2604818 .. 2604846 -  -2.9   -3.8917   GCTGAAGGAGAACAA        GTTCGGCATCGAC ATC GGCGAGGCCGAGG        CCATCTATCGCGACA  56 464
TspCOW1_24300 NONE
TspCOW1_24290 2602277 .. 2602287 -  -2.4  -3.04715   CAGGCGTCTCAAAAC                 GTGG CCT CCTC                 CAGGATCGCGGTATA  41 8
TspCOW1_24280 2601681 .. 2601719 -  -7.4  -2.71364   TGATTTTCGGAATCA   TCCTATGATGGGTTACGC TGC GCTTCACCCATCCTACGA   TCCTTCCGATGATTT  51 118
TspCOW1_24270 2600800 .. 2600811 -  -5.8  -3.57462   CAGGCTATCCTGAAA                TGGG ATAC CCCA                 TAATGGGATATAGGA  55 335
TspCOW1_24250 2599778 .. 2599806 -  -5.1   -3.8917   CCTCAACTACAAGAA        GCGCATCGAACAG CGT CTGAATGACGCGC        TGGCGAAACTGTAAG  59 132
TspCOW1_24210 NONE
TspCOW1_24200 2592038 .. 2592074 - -12.9  -2.78816   CCAGCCGCGATCACA   TCGGCGGCACCGCGCC GTCCCA GGTGCGG-GCCGCCGC    ACAGCGGGCGCGCCA  67 46
        algZ NONE
        algR 2588657 .. 2588667 -  -2.4  -4.37871   CGAAAGAAAATGAAA                 GGAC GTA GGCC                 GGGATAAGCACAGCG  62 141
        hemC NONE
        hemD NONE
TspCOW1_24130 NONE
        hemY 2583422 .. 2583453 - -12.2  -2.65993   ACGACATCTACATGA      GCGGCCCGCCGGCGA TGG TCGA-GGCCGGCCGC      CAGAGCTTCCTCGGC  64 418
TspCOW1_24100 2581180 .. 2581204 -  -7.2   -3.2794   GTTCATGTACACCAA         GTTCGTCATCG TCAC CGACGACG-AC          GTGAACATCCGCGAC  54 380
         gor 2575696 .. 2575706 -  -2.4   -2.5632   TAATACAGCATGAAC                 CGGC ATC GCCC                 TGCATTCGGGTATGC  38 289
         rnd 2574334 .. 2574344 -  -8.2  -3.59262   GCGGACACCCGTAAA                 GGCC TGC GGCC                 GAGCTTCACTCCGGC  62 193
        ttcA NONE
        htrB NONE
TspCOW1_23980 2568882 .. 2568916 -  -6.2  -3.37487   GGACAGCTTCAAATA     TCTCGACCGCCGGCTG CAT CAGCATGCGGGCAAGC     TCGCTCAGGCCGCCG  55 178
TspCOW1_23940 2564987 .. 2564999 -  -6.9  -3.53012   GCGCGCTGGCCGAAA                CCGGC GAT GCCGA                GGGAGCCATTGCCGC  58 135
TspCOW1_23840 2553270 .. 2553291 - -18.7  -4.19735   TCCCTGAAAAGGAAA           CGGCCCGGC AAGC GCCGGGCCG            CATCGGGGGTCTGCC 100 49
         smf NONE
         smg NONE
        topA 2549082 .. 2549109 -  -9.2  -2.58714   CGGGACAGGAAGGTA        GGTCGGGTTA-GC GCA GCGTAACCCGACA        GTGGCCGGCATGTTG  60 144
        polA 2541676 .. 2541709 -  -5.9  -5.41143   GAGCGGGCAAAAAAA     CGCCCCGGCTG CAAGGGGGAAGT CGGCCGGGGCA      AGGTGTCACCCGGAT  93 199
TspCOW1_23730 2539921 .. 2539954 - -16.1  -4.11394   ACCGGACCGGGAAAA     CG-ACAAGGGGCGGCC CAT GGCCACCCCTTGTTCA     GTCATATCGATTGCA 100 61
TspCOW1_23720 2537776 .. 2537800 -  -5.5    -3.524   CACCCACTGAGACAA          CGGCGGGGCCA GTT TGCTCCCGCAG          CGCTGAACCGGGGCT  55 60
TspCOW1_23710 2536476 .. 2536494 -  -5.4  -2.80344   GGGGGAGGGAACAAG             GAAATAAA CAC CTTATTTC             ACAGTTCGCCGTAGG  47 24
        dsbA 2535534 .. 2535553 - -12.1  -5.19328   ATCGGACAATAAAAA            GGCCCGC ATGACG GCGGGCC             ACCCTATCCAAGTAG 100 130
        ilvB NONE
TspCOW1_23680 2533002 .. 2533033 -    -3  -3.01712   CCCGTGGGTTCAATA     CTGCCCCGTGTGTC TGTATC GACGC-C-GGGCAG      GAAGTCTTCAGATGT  42 33
TspCOW1_23670 NONE
TspCOW1_23660 NONE
TspCOW1_23650 2529337 .. 2529366 -  -5.5  -4.36914   CCCCGCGGCACAAAA       CGTGAAGCCGGAC CGGC GCCCGGCGGCAGG        ACTCAGAATCCGTAC  69 28
TspCOW1_23640 2528679 .. 2528700 -  -4.3  -3.61398   GCGGCCGCGGAAGAA           GCCGG-GGAC GAC GCCTACCGGC           CGATGACCGACGAGG  52 259
         anr 2521939 .. 2521958 -  -9.2   -3.4071   AACAATCAGGCAGAA            CCGACGGC TCGG GCGGTCGG             CGGAAAGGCGAGGTA  67 54
        ccoN 2520303 .. 2520319 -  -5.1  -2.71144   CATTCTTTTCAACGA              CTTCATG ACT CATGACG              TATCCTCCTCAGGCG  44 34
       ccoO1 NONE
TspCOW1_23510 NONE
TspCOW1_23500 2518560 .. 2518595 - -21.9  -3.53012   TTTCCCGGCCGCAAA    CGCCAGCGGCGGGCC GCCCGG GGCCCGCCGCTGACA     GTTCTGGCGCTACTC 100 39
TspCOW1_23490 NONE
        ccoH 2516497 .. 2516510 -  -2.3  -3.19157   GATCAACCGCACTAA               CATGG TGGC CCGTG                GTGCGTTGTTTCAGA  44 36
TspCOW1_23460 2515913 .. 2515928 -  -2.5  -2.62616   GGATCTTCTACACCA              TCGAG ATGCTG CCCGA               ATTCTGGCAGGGGGT  38 213
TspCOW1_23430 NONE
        phoP NONE
        phoQ 2511798 .. 2511813 - -10.4  -2.53263   TCGACGGGGAATGGA              TCGGCG GTTT CGCCGA               CCTCACCGAACTGCA  56 116
TspCOW1_23390 2510809 .. 2510830 -  -6.5  -5.50499   GGACATTGAAAAAAA           CCTCAACGC AGAG GCGCCAAGG            CGCAGAGAAAACAGA  95 228
TspCOW1_23380 2510238 .. 2510276 - -15.4  -4.57569   CGAGGCGGGGAAAAA  CTCAACCCGCCAT-GGC GCAGGG GCCGATGGCGGGTTGGG   GAAGAAACGCGCAGA 100 104
TspCOW1_23370 NONE
TspCOW1_23360 2507718 .. 2507752 - -10.6  -2.64243   TTACACTGGAGAGTA     GGATGGGTGAAGGCGC TGT GCGCCGCAACCCATCG     ATGCGGACCGACGAT  62 124
TspCOW1_23350 2506728 .. 2506740 -  -2.6  -4.25848   AAGGGCGCAGTAAAA                CCGC TTTGC ACGG                CCAGCACAACGAAAT  62 456
TspCOW1_23330 NONE
TspCOW1_23320 2505532 .. 2505588 -  -3.8   -3.6502   GACCTGTCACTGAAA CTCGGTGCACGCCTGATC-CC-CGGCAC CACCC GTGCCGTGGCGGT-ACGCG-GCATCGAG GGCCACGGGGCCCAC  54 324
TspCOW1_23230 2497406 .. 2497432 - -19.5   -5.4505   CGCCGGAACAAAAAA         CGCCGCCCGTT TCGTG AACGGGCGGCG         TCATGCGTAACCCGC 100 67
TspCOW1_23220 2495709 .. 2495719 -  -6.8  -2.81464   CCAGCATCGACCAGA                 TGCG CCG CGCA                 CTGGGCCGGCACGTC  50 211
TspCOW1_23180 NONE
TspCOW1_23160 2491752 .. 2491771 - -13.6  -5.71712   CCGGACATAAAAAAA            CCCCGTTC TGAC GAACGGGG             TTTTGTGGCTGCATC 100 47
        nosR NONE
        nosZ 2483001 .. 2483011 -  -8.2  -4.37886   GTATGCCGGACAAAA                 GCGC GAA GCGC                 GTTGAACGCCTTTAT  77 182
        nosD 2481575 .. 2481586 -  -3.6  -2.66733   TGGGAACGCAGAGGA                CGCG GAGT CGCA                 GAGACGCAGAGAAAC  42 55
        nosF NONE
        nosY 2479652 .. 2479687 -  -9.6  -2.72227   AAGATGTCTGAACCA    GCTGCCGA-ACCTGACG TCC CGGCCGGCGCCGGCAGC    GACCGGGCCGCCGGG  61 133
        nosL 2479081 .. 2479097 -  -2.2  -4.37886   TTACTTTGTATAAAA              GCTGAC AGGAA GTCAGG              CTAATTCACGTGTTT  62 55
TspCOW1_23060 NONE
TspCOW1_23050 NONE
        tsaD NONE
        folB NONE
    folK-2_1 NONE
TspCOW1_22950 NONE
        uppP 2465693 .. 2465705 -  -6.2  -3.31248   TAATATTCCTGACAA                CGCC GGTCA GGCG                AACACCCAGAACAGG  54 19
TspCOW1_22930 2465164 .. 2465182 -  -8.8  -4.13767   GCGGTTACGGGAAAA             GCGGATCG TGG CGATCCGG             GAGGTGAAAACCGGT  78 74
        gabD NONE
TspCOW1_22800 2451556 .. 2451584 -  -5.3  -4.75472   GCCAGATCAATAAAA       TCGGACCGGATC AACCCG GATCCGG-CAGA        TTTGAATGTTTAAAT  79 97
      nirS_2 NONE
TspCOW1_22780 NONE
TspCOW1_22770 NONE
        nirF NONE
        nirD NONE
        nirL NONE
        nirG NONE
        nirH 2445099 .. 2445157 -  -7.4  -2.57092   AATGTCATTAACGCA GAGGCGCGGAGGCGCAGAGATGGCAAT AATGAA ATTCATTCCTCTGCGTCTCCGCGCCT- CTGCGTTTTTGTCGC  50 2
        nirJ 2443812 .. 2443824 -  -6.9  -3.62859   ACCACAACGCTCAAA                CCGGC TCG ACCGG                GATGTACACCTTCCC  60 8
        nirN 2441780 .. 2441800 -  -3.8  -3.35849   GTCAGGAAATCAACA            CCCTGGCG AATTG CGCCGCGG            CTGATTCGGATCAAC  49 238
TspCOW1_22690 2440205 .. 2440249 - -10.6  -2.75343   TGGACATCCCCAAAG GGGTGATGGCCTCGCGCTTG TCGGT CAAGCCCGAGACCTTCTCGC GCATCCTGCGCAATC  60 147
        norC NONE
        norB NONE
        norE NONE
TspCOW1_22640 NONE
        nirQ 2435765 .. 2435804 -   -10  -2.88822   CTCGCCAGACAATCA  TGTAGGTCGGGTTA-GCCC ACA GGGCGTAACCCGACGTCCT  CCGCAGCCCTGTCGG  64 125
TspCOW1_22620 NONE
TspCOW1_22610 2434067 .. 2434114 -  -6.2  -3.06183   GTCATTGCGAGCGAA GCGTGGCAATCTCGTAATG-CAG GAC CAGTCGGTTGGAGATTGCCACGC TTCTCCCATAGAATC  52 135
TspCOW1_22600 2432067 .. 2432097 - -16.3  -2.63858   CACCAGACGCAGAAT      GTCGGGTTACGCCC TGCC GGGC-TAACCCGAC       CTACACTACATCCTT  84 48
        yhcC NONE
TspCOW1_22570 NONE
TspCOW1_22560 NONE
TspCOW1_22550 2426923 .. 2426935 - -10.5  -3.05463   AGGCCTGCGACTGAA                GGGCG TCA CGCCC                GGCATTCGCGAGGCA  60 205
      cbbL_2 2413931 .. 2413945 -    -7  -4.21812   GGCGACTGAAAACAA               GGCGCG TAC CGCGGC               AACAGACCGCCGGCG  71 93
      rbcS_2 2413458 .. 2413485 - -18.4  -5.45802   GGGGCAAAATAAAAA        GCCCCTGTCCGG TGGA CCGGGCAGGGGC         TCGGACTTGCTGGCA 100 55
        norQ 2412420 .. 2412461 -  -4.3  -3.93401   CGTAGAAACGAAGAA CTACGTAGGTCGGGTTA-GC GTT GCGTAACCCGACAACCGCGG CACGTTGGGTTACGG  57 100
TspCOW1_22410 2409891 .. 2409930 - -15.8  -2.82432   AAAGCACGGAATAAT  GCAGGTTGGGTT-CGTCGC TTC GCGCCGTAACCCAACATGC  CGCGACAGTGTCGGG  86 143
TspCOW1_22400 2409103 .. 2409156 - -19.1  -3.01684   AAGCACGGACATACA TTATTACCATCTCACTGCCATGGCGC TGC GCGCC-TGGCGATGAGATGGCAATAC GCATACATGATTATT 100 81
TspCOW1_22380 2405711 .. 2405724 -  -5.9  -3.14344   CATGGGCGCGACCAA               GGCCG ACTT CGACC                GCACCGTCGCCATCC  51 320
        purC 2400359 .. 2400374 -    -6  -2.55351   GCTCTTGATATCAAT              CGCCCG TCAG CCGGCG               CTGGGCCTCGCGGTA  48 5
TspCOW1_22320 2399691 .. 2399709 -    -3  -2.60075   GCTCCTCGAATGAAC             CGGATCAG TAG CGGATACG             AGGAGGATAGCTATT  40 36
        cusC NONE
TspCOW1_22300 2397039 .. 2397067 -  -7.4  -3.83868   CACGAACAAAATCAA       CCGTCATCCCGGC GCAG GCCGGGATC-CAG        AGACCACGGCGGGCC  66 101
        cusA 2393823 .. 2393838 -  -4.6  -3.47573   TCAGCCAGACCAGAA              CGGGTG GTAT CACCAG               CCTCTGCATCAGCGC  51 34
TspCOW1_22280 2393245 .. 2393263 -  -5.9  -3.57144   GCGGGCACGTGCAAA             CGCGGTC AGGTA GACCGTG             GCTCCCGGTGCGGGA  55 41
TspCOW1_22270 NONE
TspCOW1_22260 NONE
TspCOW1_22250 2391738 .. 2391753 -  -3.2  -3.46081   CACTGAATGAATGAA              TGTTCG GACA CGAGCA               CCGTTTCAGTGATGG  47 31
TspCOW1_22240 2391334 .. 2391359 -  -8.3  -2.74514   GGAAATCGGCAATCA         TCCCGG-CATGG TGG CCATGGCCGGCA         TGCCCGTGCCCCTGA  54 133
TspCOW1_22230 NONE
TspCOW1_22220 2388382 .. 2388396 -  -8.6  -2.85503   GCTCAATAGTGAAAC               CGGATT TGA AATCCG               CTCATGCATCCATTG  58 67
TspCOW1_22210 2387766 .. 2387782 -  -3.7   -3.2614   CAGGTGTCAGATCAA              GTCGAAA CTA CTTCAAC              TAACGGTTGTGCATC  47 25
TspCOW1_22200 2386517 .. 2386527 -    -4  -2.50816   TCCTCATGTAGTAAT                 CAAT CAT ATTG                 GTACTAGCGGCGGGG  41 141
TspCOW1_22190 NONE
TspCOW1_22180 NONE
        czcD 2384387 .. 2384412 -  -3.9  -3.35046   TCACCTGCTGAAAGA         CATTCCGGAGT TACA ACCACGGATTG          TGTTCCGGATTGATT  49 163
        copA NONE
        pcoB 2381579 .. 2381603 -  -6.3  -2.98489   GAAAACAGATAAGGA          CTGCGTCGACG CCG CATCGCCGCAC          AGATTGATCTAGAAA  51 34
TspCOW1_22140 2381070 .. 2381103 -  -2.9  -4.81212   CTGACTATAACAAAA     GCGGCCCG-GATTGCC ACA GGCCTTAGCGGCCCGC     CGCCGGGCCTCAGGC  73 35
TspCOW1_22130 2380245 .. 2380267 -    -4  -3.20382   CTTCAGAGCCACCAA           GCCGCGTC AGTGCAA GGCGCAGC           GCGCAGGCAATGGCG  47 455
TspCOW1_22120 2379966 .. 2379996 - -25.6  -4.33151   GATGAGAACGCAAAA       GAAACGGGCGGGGT ACA ACCCCGCCCGTTTC       TTTGTACAGCCGGGC 100 49
TspCOW1_22080 2375326 .. 2375340 -  -6.4   -3.7347   GTCAATATCGAACAA               CTGTCC TAT GAACAG               ACAGCGCAGGTCCTG  59 375
TspCOW1_22040 NONE
TspCOW1_22030 NONE
TspCOW1_22020 NONE
TspCOW1_22010 NONE
TspCOW1_22000 2362770 .. 2362790 - -10.4  -4.24342   GGTTTCAGTAAGAAA            CACCCGCC GGGGA AGCGGGTG            CAGAGGGGAATGGAA  82 184
TspCOW1_21990 NONE
TspCOW1_21980 2360360 .. 2360383 - -18.2  -4.08279   AGATTGCATAAAGAA          GTGACCCGGC AGAT GCCGGGTCAC           GACAAACGGCCTCAG 100 37
TspCOW1_21970 NONE
TspCOW1_21960 2359176 .. 2359193 -  -8.4  -6.23209   TGAACCAAAAAAAAA             CGGGAC GCGAAG GTCCCG              TTAAGAGGGTGGAGG 100 74
TspCOW1_21920 2355760 .. 2355789 - -13.5  -2.65354   CGCACTTCAAACCGA       TGGGTTGCGGCGC AAAG GCGCCTCCACCCA        TCCTACGAATAGCGA  74 44
TspCOW1_21870 2349296 .. 2349330 - -12.8  -2.66634   GACTGCAGGACAGTA     GGATGGGTGGAGGCAC CCT GTGCCGCAACCCATCG     CCAGGACCGCGGCAT  71 357
TspCOW1_21830 2344951 .. 2344987 - -19.5   -4.2558   TATGTGGGATTAAAA    CGTAGGTTGGGCTGAGC AAC GCGAAGCCCAACCTACG    TCTCGTATAGTGCCT 100 21
TspCOW1_21800 2340377 .. 2340398 - -18.7  -5.21709   GCCGACATGAAAAAA           GCGCCGCCC CGAG GGGCGGCGC            CTGTTCTGCAGCCGC 100 53
TspCOW1_t00330 2340172 .. 2340196 -    -5  -2.88249   TATACCTCGGAGACA         TGGATGCCCGC CGTC GCGGGCATG-A          CGAATGAATTCAGAG  46 67
TspCOW1_21790 2337828 .. 2337859 - -14.4  -2.51133   GAGGCAGGCATGAAT      GATGGGTTGCGGCG CAGG CGCCTCCACCCATC       CTACCCGAGCAGCGT  78 82
TspCOW1_21770 2334379 .. 2334389 -  -8.2  -4.37886   GCAGGCGGGACAAAA                 GCGC GCA GCGC                 GTTGAACGCCCTTCA  77 406
        mutY NONE
TspCOW1_21750 2332347 .. 2332371 -  -7.1  -2.64912   CCGCGAAGGGAGAAG          CCGCGTATTTA ACG TGAAAACGCGG          GCGGGCGCAAGTCGG  50 42
TspCOW1_t00320 NONE
TspCOW1_21740 NONE
TspCOW1_21730 2330714 .. 2330727 -  -8.1  -5.00616   TTGGCTGTTAAAAAA               TGGCG GTTT CGCCA                TCATGTAAGTGATAT  90 90
TspCOW1_21720 2330231 .. 2330245 -  -2.8  -2.73771   CGAGATTTGGTAAAT               TCTGAG GCT CTCACA               CCGCGAGAATTTTTT  41 79
TspCOW1_21710 2328758 .. 2328768 -  -2.4  -4.56597   TGGTTGGCGCAAAAA                 TCGG TAC CCGG                 CACATAGCAGCAGGG  66 59
TspCOW1_21680 NONE
TspCOW1_21670 NONE
TspCOW1_21660 2326177 .. 2326210 - -17.7  -3.01791   ACCTGGCTCGTAACA     CTGTCACACTGTGTGA CAG TCACACAGTGTGAC-G     CCCGTGCATGGCGCG  90 11
TspCOW1_21650 NONE
TspCOW1_21640 NONE
TspCOW1_21630 NONE
TspCOW1_21480 2313636 .. 2313652 - -15.1  -3.14132   TCGCGCGTTTACGAA              CGGCCCC AGC GGGGCCG              TGAGTGCGCGAGACC  85 428
TspCOW1_21470 2312791 .. 2312812 - -10.1  -2.52516   TGGCTGACCATGAAG           GCTGCCAGG ATCC CCTGGCAGA            TCCTCCCTAGCAGCG  62 453
TspCOW1_21460 NONE
TspCOW1_21450 NONE
TspCOW1_21440 NONE
TspCOW1_21430 NONE
TspCOW1_21420 NONE
TspCOW1_21410 2309995 .. 2310012 - -14.1  -5.18371   TGCCATAAAATAAAA             CCCCCGC CGAA GCGGGGG              CTACGCCTTCCCTGG 100 164
        manB NONE
TspCOW1_21330 NONE
TspCOW1_21320 2300106 .. 2300127 -  -6.5  -4.09739   GGAACTGCTGGAAAA           GGACAGCCG CGGG CGACTGTCG            GCACCGTTCGATGAG  66 288
        sopT NONE
TspCOW1_21280 NONE
TspCOW1_21270 2296710 .. 2296739 - -13.5  -4.21933   GGAACGTCAAAACAA       CGTCCCCTCTCCC TCAA GGGAGAGGGGCTG        TGGCGTTGCTCAACC  95 116
        rmlA NONE
        rfbC 2292214 .. 2292249 -  -9.8  -2.78384   GGTCGGGTTAGCACA    GCGTAACCCGACA-ACC CGC GACCTGTCGGGTTACGG    TGCTGCGCACCTAAC  61 74
        rfbD 2291230 .. 2291243 -  -5.9  -4.09864   ACCGATGTCCGAAAA               GAGCC ATGC GGCCC                TTAACGTGGTCTGAG  64 81
TspCOW1_21200 NONE
TspCOW1_21190 NONE
TspCOW1_21180 NONE
TspCOW1_21170 2286120 .. 2286139 -  -3.5  -2.90219   CAGAATCTTCATACA            CCAGGTC GAACCA GACCTTG             GCATACTGGTCAAAA  42 58
TspCOW1_21160 2285117 .. 2285141 -  -6.4  -4.11216   CGCTCACCCTGAAAA          CTCCCTTGAT GTGAT ACCAGGGGAG          CAGGGTGAAGGTGTC  69 194
TspCOW1_21140 NONE
TspCOW1_21130 NONE
TspCOW1_21120 NONE
TspCOW1_21110 2281246 .. 2281256 -  -5.4  -2.94705   TACAACGGAAGCATA                 TGAC GTC GTCA                 GCAACGCAAAAACCA  48 89
TspCOW1_21100 NONE
TspCOW1_21090 NONE
TspCOW1_21080 NONE
TspCOW1_21070 NONE
        cpsF NONE
TspCOW1_21050 NONE
TspCOW1_21030 NONE
TspCOW1_21020 NONE
TspCOW1_21010 2272553 .. 2272563 -    -4  -2.57988   AAATGTATGAAGCGA                 TTGA TTA TCAA                 TATTCTTAGCCATCT  42 96
TspCOW1_21000 NONE
TspCOW1_20990 2269182 .. 2269213 - -12.4  -3.11634   CCCGACATCACGCAA      CGTCGGATTACGCCC TCC GGGC-TAATCCGACC      TACGAATTCCCGTCA  73 44
         gmd NONE
         fcl NONE
TspCOW1_20960 2263839 .. 2263854 -    -6  -3.54543   ATGGACGGTCGCAAA              CCGGCC CTGT GTCCGG               TGGTTTGCTGCCATT  58 357
TspCOW1_20950 NONE
TspCOW1_20940 2259937 .. 2259964 -  -5.4  -2.69151   TCGTTCTATATATCA        CGTCATCCCCGC GAAG GCGGGGATCCAG         AGGTCGCGGCGGTTT  46 199
TspCOW1_20930 2259216 .. 2259237 -  -6.5   -3.8211   CCGCATGGAGAAGAA           CACCTTCAG CGAC CCGCAGGTG            CAGCAGGCCCTGGCC  62 373
        fxsA 2255574 .. 2255590 -  -5.1  -4.57073   CACTCTCCTTAAAAA              CCAAAGA TGG TCATTGG              GTTGTGAGTGTTAGC  72 452
        groS NONE
        groL 2253512 .. 2253531 - -12.1    -5.626   GATCCCACAAAAAAA            CCCCGCC ACAAAG GGCGGGG             TTCTTCGTTTCTGAC 100 60
TspCOW1_20840 2249812 .. 2249827 -  -3.3  -3.55622   GGCAATCTCCTCAAA              TGTGA CGGGGT TCACA               CGGGGTCCTTAATGT  49 120
        glnE 2246868 .. 2246905 - -16.4  -2.74144   GGGTTAGCCTGAAAG   GCGTAACCCGACACTC GTCGCG GCATGTCGGGTTACGC    TGCGCCAACCCGACC  86 40
        ilvE 2245587 .. 2245597 -  -8.2  -3.22298   GGTACCCATGATGAA                 CCCC GAA GGGG                 TTCTATGGGAGCCGC  59 326
TspCOW1_20810 NONE
TspCOW1_20800 NONE
        lpsB NONE
TspCOW1_20780 2242096 .. 2242124 -  -7.5  -3.28712   GCGCTTGCGCCATAA        CCCATCACC AGGCCGCTGGA GGTGATGGG        TTGCGCTGCGCCCCA  56 55
TspCOW1_20770 2241616 .. 2241631 -  -2.4  -2.52543   ACGCCGTCGAACGGA              CGGCCG GGAT CAGCGG               AACTCGGTATAGGAC  38 19
TspCOW1_20760 2240700 .. 2240727 -  -6.2  -3.76952   TGGAGTGAAGCGAAA        CCCATCGCCGCGC GCG GC-CTGAGATGGG        TTATGGCGCAAGCGC  61 97
        waaA 2235836 .. 2235870 -  -8.4   -2.7535   CTGCGTAACACAGTA     GGATGGGTGGAGGCGC GGT GCGCCGTAACCCATCG     CTCTCAGGCCGCACC  58 116
        thiC 2226528 .. 2226573 - -17.8  -3.60098   AGGGGTTAGCCCAAA CGACAATATCTCGGAGAACC GGTTTG GGTTCTCCGAAATAATGCCG TTCAGCAACTCTTGA  95 228
TspCOW1_20650 2225193 .. 2225234 - -15.3  -3.86481   AATAATCGAGAACAA GGGGTCGATGACCAATGACA TCG CGACATTG-TCACCGACCCC TTTACTCATTAACGT 100 56
TspCOW1_20630 NONE
TspCOW1_20620 2223075 .. 2223101 - -15.1  -2.64274   ATGGTCGGAAAGGTA         GCCGGAGCGCG GGGAA CGCGCTCCGGA         TCAGAGCGGCGTGGT  81 321
       rnk-1 2222490 .. 2222523 -  -5.9  -2.63715   ATGGATTGCAGACCA     TGCAGACGCGAATCGC CTC GCGTGCCGCG-CTACA     GTTCGATTACACCGG  46 21
TspCOW1_20600 2221721 .. 2221744 - -19.6  -3.18735   GGAACAGGTGAGCAA          GCCAGGCGCC ATCA GGCGCCTGGC           TCAAATGAGAAAGGT 100 200
TspCOW1_20590 2220998 .. 2221016 - -13.8  -4.44667   TCCCCCAACAATAAA             CGGGCGCC TGA AGCGCCCG             CCTGACGTCAGTCCT 100 284
TspCOW1_20560 2216983 .. 2217009 -  -3.8  -2.76171   TCCAAGAATGAGAAC         GTATATTATTGA TAT TCAATACAATAC         TTATATGGCCCCGAT  43 63
TspCOW1_20550 2216261 .. 2216302 - -22.5  -4.83615   TATGGGCCAGAAAAA GGCCGATG-CCGTCTGAACC GAA GGTTCAGACGGCCACCGACC GCCAGGCGCACTGCC 100 9
TspCOW1_20540 NONE
        yrkI NONE
TspCOW1_20520 NONE
TspCOW1_20510 NONE
        mscL 2214295 .. 2214306 -  -5.8  -3.26722   GCCATATGCACAACA                GGGT CCGG ACCC                 CTCAAATCCCGTAAA  51 48
TspCOW1_20490 2211451 .. 2211482 -    -8  -2.91912   CGAGTCATCCACACA     CCGTCGC-GGCAGG TGGATC CCCGCCTGCG-CGG      GGATGGCGGGGCGAC  56 61
TspCOW1_20470 2209200 .. 2209223 -  -9.5  -3.04144   GTCCGAGGCCGAACA          GCGTGCGGC TGGCTG GCCGCACTC           GTCGACCCGCGCCTG  64 374
TspCOW1_20440 2207329 .. 2207373 - -17.9  -3.55447   CGATTGATCAGACAA TCCCGCCGGGCGGCCGCGGA GATGTA TCCACGGC-ACCCGGCCGGA CAGGTGTCACTTGAC  95 32
TspCOW1_20400 2201217 .. 2201227 -  -2.4  -3.83502   CATTTGCAGATTAAA                 GTCG GCT CGGC                 GAGGCAGGATCAGAA  53 213
TspCOW1_20390 NONE
TspCOW1_20380 2197941 .. 2197951 -  -6.8  -3.19157   CATGAATGGGAGCAA                 CTGC GCG GCAG                 CATGCGCAGTCGCCG  52 475
TspCOW1_20350 NONE
TspCOW1_20340 2194825 .. 2194846 - -14.5  -6.38039   GACTCAAAAAAAAAA           GATCACCGC CTGA GCGGTGATC            TTCGCTGGCTTGCAC 100 68
TspCOW1_20260 2186649 .. 2186680 -    -5  -3.49618   TCGGGACAGAACGAA      CTGCTGGCGAACCT CGAC ACGCTCGCCTTCAG       TCCCGTCCCGCTGCC  52 167
TspCOW1_20240 2184228 .. 2184260 -    -7  -3.56643   GTCACACCCCTGAAA     TCCC-TGGTTCCCGC TTTC GCGGGAATGACGGGA      TGAGGAATAATCAGA  60 344
TspCOW1_20220 2183130 .. 2183145 -  -6.1  -3.42841   ACAAGCCCACGACAA              TCCCG CGCCGC CGGGA               ACGTGGCGGAGCTTC  56 58
TspCOW1_20210 2182504 .. 2182519 -  -2.4  -5.00884   AGGGCTGGGAAAAAA              CCAGGG AAGT CGCCGG               CGCAACCGCTGACTG  79 214
TspCOW1_20190 NONE
TspCOW1_20180 2179453 .. 2179498 -  -5.3  -2.63596   CGGTATCGGACAGCA CCCGGGACACCAGATCGACCAG CCC CGGCTCGACCTAGCG-CACGGA CAGGTTCACCGCAAT  46 14
TspCOW1_20170 2178925 .. 2178938 -  -3.7  -3.14468   TTCCATTACACGTAA               TCCCG GCGC CGGGC                AACAGTATTTTTGTT  45 97
TspCOW1_20160 2175736 .. 2175748 -  -9.1  -2.90763   GTTACAGGCCAGATA                CAGCC ACG GGCTG                TCCGGATGCCGGCGC  59 63
TspCOW1_20150 2174250 .. 2174286 -  -8.8  -2.52795   AACGCCGTGAAGCCA   TGTCCCGGCTGGGCAAGA TGG CCCTGCC--GCCGGAACA   GCGCTAGTCGCCCCG  57 29
TspCOW1_20120 2173078 .. 2173125 -  -2.5  -4.20368   GCAGCCGAACAGAAA GCGGCTGCAGTGCCGGGCGC-GA CCGG TCTAGGCCCGGCGACGC-GACGC TGCGATCACCACTGC  59 5
TspCOW1_20110 2172549 .. 2172588 - -10.7  -3.62597   GTCACGGTGCAACAA  CTGGAGAACGCGCCGGAC TGAGC ACCCGGCACG-TCTCCCG  GCGGATTTTTATTTC  71 34
TspCOW1_20070 2169421 .. 2169432 -  -4.4  -3.75897   AATCTGCAACCGAAA                CAGT CCTG ACTG                 GGATAGCCGGGCGGG  56 94
TspCOW1_20060 2168540 .. 2168571 - -10.2  -2.91274   GGCATCGCAATGACA     CGA-CGCGGGCCGG TCAGGG CCGGCC-GCGGTCG      AGGGCCGCCTTCAGT  64 7
TspCOW1_20050 2167878 .. 2167909 -  -2.3  -2.51966   GCAAAGGCCAGCAAG     GCGATGCTCAGCAGC AGGC GC-GCC-AGCATCTC      AGGGAGCGGATTGCG  38 24
      resA_2 2167360 .. 2167380 -  -2.5  -2.82623   GCGCGGCGAGAATCA            GCAGGAC CGCCTTC ATCCCGC            CTCACTCCTCATGCT  39 27
TspCOW1_20030 2166692 .. 2166713 -  -2.1  -2.86271   CTGGCATCAGAATGA           CTCCGG-GCG GGC CGCGCCGCTG           ATCCATGCACAGGCA  39 193
        proV NONE
TspCOW1_20010 NONE
TspCOW1_20000 NONE
TspCOW1_19990 2162009 .. 2162019 -  -2.4  -3.78953   AGCTTGATCATCAAA                 CTGC CAG GCGG                 CCTGAACGATTGCCC  51 285
TspCOW1_19980 2161393 .. 2161414 -  -2.9  -2.62184   GCGCCTCCCAGATCA           GGTCCAGGA TGGA TTCTCGACC            GCGGCCAGTGCGGCC  40 1
TspCOW1_19970 2160728 .. 2160764 -  -5.8  -3.05596   GATGGGTGGAGCGAA    GCGCAACCCATTGTTG GTCCG CATCGATGGGTTACGG    CGCTGGCGCCTCCAC  49 74
TspCOW1_19950 2158176 .. 2158188 -  -4.7  -3.25823   GTGGCTGCAGATGAA                GGGCG ATC CGGCC                ATTCGCAGCGGTCTG  49 515
TspCOW1_19930 NONE
TspCOW1_19900 NONE
TspCOW1_19890 2148969 .. 2148986 -    -7  -3.06796   GCCGAGGGCATCGAA             GACGAG ACTCAA CTCGTC              TTCCTGTGTCGCGAG  51 242
TspCOW1_19870 NONE
TspCOW1_19860 NONE
TspCOW1_19850 2141814 .. 2141834 - -14.7  -2.53164   TGAGCGAGGAGGAAT            GGATCCGGG ATG CCCGGACCC            TGCGCCGGCGCCCGC  71 231
      rhlE-1 2139613 .. 2139642 - -23.7  -5.87688   AGAACCTAAAAAAAA       CGGCCGGTAACGC TCAG GCGTTACCGGCCG        CTTATACGTCAGACC 100 52
      cbbL_1 NONE
      rbcS_1 NONE
       csoS2 NONE
       csoS3 NONE
TspCOW1_19770 NONE
TspCOW1_19760 NONE
      ccmK_3 NONE
      ccmK_2 NONE
      ccmK_1 2129319 .. 2129329 -  -2.4  -3.05384   CCCGCCCTCACTCAA                 CTGC GCT GCGG                 GCGGTTGCCAGCCAT  41 11
TspCOW1_19720 NONE
TspCOW1_19710 NONE
TspCOW1_19700 NONE
TspCOW1_19690 2127490 .. 2127508 -  -7.3  -4.52589   CCCGGGCAGACAAAA             CCGCCCG CGCCC CGGCCGG             CCACCTCCGCCCAGC  76 194
TspCOW1_19680 NONE
TspCOW1_19670 2123998 .. 2124011 -  -4.5  -2.66979   TGAAGATCAATGAAG               GCAGT CTGG ACCGC                GGCATCCGCATCATC  42 196
TspCOW1_19650 2122053 .. 2122065 - -10.5  -3.22521   CGGACAGGAATGCAA                CGGCC CGG GGCCG                CGCGAACTCAATGAC  68 33
        fccA NONE
      fccB-2 NONE
        chaB 2119683 .. 2119694 -  -3.6  -3.89822   GATGGACCTGACAAA                GCCG TCTC CAGC                 TTCTATCCTGATCAT  57 376
TspCOW1_19600 2118974 .. 2118996 -  -6.2  -3.15544   CGGGATCGGCAGCAA           CAGCGCCGAA GGC TTCTGCACCG           TCGCCGGGACATCCA  51 294
TspCOW1_19560 2114980 .. 2115004 - -19.3  -5.40072   GGCCGGGCAAAAAAA          GCGGCCCGGAC AGA ATCCGGGCCGC          ATTGGGGACGGCAAT 100 76
TspCOW1_19550 2113981 .. 2113995 -  -9.2  -3.31144   CGGTCACTGGCAGAA               CCGCGG CGA CCGCAG               CCGACCCGCCTCGCG  66 414
TspCOW1_19530 2112648 .. 2112661 -  -5.3   -4.4648   ATTTGGATTACAAAA               CAACA GGGC TGTTG                TCTGCCCACGACGCA  72 454
        oprP 2111334 .. 2111353 - -16.4  -4.61868   CAGGCACACAGAAAA            GCCCCGCC ACAA GGCGGGGC             TCAGGCATCCCTGCA 100 77
        rsuA 2110138 .. 2110188 - -13.1  -3.53012   CCTGCCCTCCCGAAA CTGCCGGCACGCCTGCCCGCCGCG AAGT CCCGGCCGCC-GCCGTGCTGGCAG CCTTCGACGCCTTCT  77 425
TspCOW1_19490 2108614 .. 2108629 -  -3.2  -3.76048   GCTCAAGGAATACAA              GCGC GAGATCAT GCGC               TTTGCCAGCGGCGAG  56 362
TspCOW1_19460 2105865 .. 2105885 -  -8.9  -3.12351   GCCCCGCACACCCAA            TCCCGCACG GAT CAGGCGGGA            GTGGAGCTGGCAGCG  60 16
TspCOW1_19450 2105433 .. 2105444 -    -3  -4.21908   CATCATCATGGAAAA                TTTC CTCC GAAA                 TCCTTCCATGTTAAC  60 49
TspCOW1_19440 2104339 .. 2104361 - -10.5  -2.53271   GGAGCGGGAGAACAC           CGGCCCGAA GGAGA CCCGGGCCG           TCAGCGCCACCGCGC  56 422
TspCOW1_19410 2100387 .. 2100416 -  -5.6  -2.70932   CTGGGCGTTGAACTA       CGACCGCCTGCTG TTCGG CAGCCGGCTG-CG       CTTCTTCCACTATCA  45 377
TspCOW1_19380 NONE
TspCOW1_19370 2097765 .. 2097787 - -13.4  -3.84406   CGGCGACCACAAGAA           GGGCGATGTC CTG GGCATCGCCC           GGGTGGCCGGGATCA  83 369
        moaD NONE
        moaE 2096608 .. 2096637 - -17.3  -2.75963   AGGGTGACGGGAAAC       GTCGGGTTACGCCC TGC GGGC-TAACCCGAC       CTACACATAACACAT  89 92
TspCOW1_19300 2089810 .. 2089834 -  -9.2  -3.53012   GTCCCCGCCTGGAAA         CTGCGCCGGGC GTTG GCCCGG-GCCG          CCCGCCAGGGGCGTG  64 450
TspCOW1_19280 2088363 .. 2088410 -  -4.8  -3.16191   GCAGAGCCGGATCAA TCGGTTGGAGATTGCCACGGCGC CAG GCGCC-TCGCAATGACCAATCCA GCAGGGATTCGTCAG  47 37
         mpl 2086739 .. 2086754 -  -2.5  -3.18033   GAGAATGCATCAACA              GGTAC GGATCA GCACC               GGGCGGGCGAGGTCT  44 120
        ubiX 2085927 .. 2085974 -    -8  -3.06183   GTCATTGCGAGCGAA GCGTGGCAATCTC-T-AACTGA TCGATT CCACTTTACGAGATTGCCACGC TTCGCTCGCAATGAC  57 76
TspCOW1_19250 2085248 .. 2085299 - -12.2  -2.91681   GCGTAACCCGACACA GGCCGCCGTGCGTGTCGGGTTA-CG CTG CGCTAACCCGACCTACTCGGCTACC TCTGACTGCGCAGAA  71 21
        gspG 2078285 .. 2078301 -  -2.2  -2.82635   ACGCGCAGCAGGAGA              GGAGCT ATTCA AGATCC              CAGTTGCCGATATCG  39 13
        xcpU NONE
TspCOW1_19170 2076901 .. 2076945 -  -7.8  -2.78816   TGAGGCGCGAGGAGA GCCAGGGCAGGTCGGGTT-GGC GCA GCGTAACCCGACACGCAC-GGC GGCTCCCGTCGGGTT  54 204
        xcpW 2076109 .. 2076119 -  -5.4  -2.97747   GCTGCATAGGATACA                 TTCC GTC GGAA                 GACATGTTTGTCAGC  48 186
        xcpX NONE
        xcpY NONE
TspCOW1_19130 NONE
TspCOW1_19120 2072511 .. 2072533 -  -6.2  -2.71263   AATGCCGGGCAACGA           TGGGTTACGC TTC GCTTCACCCA           TCCTACGCTGCCTGT  49 88
TspCOW1_19110 2071467 .. 2071506 -   -13  -2.57132   CGTTGGGTTCAGAAG  GGTGTAGGTCGGGTTA-GC GCA GCGTAACCCGACATATACC  GCGATCCACGTCGGG  71 188
        nudE NONE
TspCOW1_19080 2069058 .. 2069068 -  -8.2  -4.37886   GCAGGCGGGACAAAA                 GCGC GAA GCGC                 GTTGAACGCCCACAG  77 152
TspCOW1_19010 2060886 .. 2060905 - -12.1  -3.32022   CCTCGTATACAGCAA            CGGCCCC GCTTCA GGGGCCG             TTGTTTTTTTGCCCC  75 16
TspCOW1_18980 2055795 .. 2055809 -  -6.4  -3.20435   GCAATGACGGATGAA               TCAGAG GCC CCCTGA               CCAACTTATCTCAGC  54 36
TspCOW1_18970 2055163 .. 2055180 -  -2.7  -3.86346   TCAGTGGGTTACAAA             GATAATC CACC GATTTTC              GCCATGAGGACCAGA  53 162
TspCOW1_18960 2054163 .. 2054183 - -18.3  -5.86061   CGGGATCAAAAAAAA            CGGGCAGCC CTG GGCTGCCCG            TTTTCGATGCCTGCA 100 86
TspCOW1_18950 2052753 .. 2052780 - -19.9  -5.64274   TCATTCATAAAAAAA        CGCCCGGCAGG TGTTAG CCTGCCGGGCG         TTCATCTGTGGCACG 100 122
TspCOW1_18940 2051476 .. 2051522 - -12.5  -3.33696   GCGTTCCTGAATCAA GTGGACTCCGTGGCATTGCGCAC ACA ACACGCAATGCCACGGAA-C-AC TGGCTCAACCCGAGA  79 41
TspCOW1_18930 2050502 .. 2050540 - -12.3   -5.1356   GGCGAGGAATAAAAA   GCCCGGGAACGGAGAGA TAGAT TCCCACCCGTCCCGGGC   CCACTTAAACGGCAG 100 59
TspCOW1_18920 2049449 .. 2049468 - -10.6   -6.0427   ACTAGACAAAAAAAA            GGGGCGGC ATAA GCCGCCCG             GCAAGGCCTCGGAAG 100 86
TspCOW1_18890 NONE
TspCOW1_18880 2044596 .. 2044654 -  -4.5  -2.75844   CGGCGCAGGTCAAAC CCGGCCGCCACCAGTGCCCACAAGCCCAG ACC CAGGACTT-CAGGCA-TGTCGACAGCCCG GGATCAGGACGTGCC  44 29
TspCOW1_18870 2044049 .. 2044075 -  -9.3  -3.63782   GAACAGCAGCGCAAA         CTCGAGCGCGG TACTG CCGCGCTGGCG         CCGCCGCGACGCAGC  72 89
TspCOW1_18860 2043540 .. 2043577 - -17.9  -2.74144   GGGTTAGCCTGAAAG   GCGTAACCCGACAT-CAG TCG CGGCATGTCGGGTTACGC   TGCGCTAACCCGACC  89 71
        rcpC 2042565 .. 2042594 -  -5.1  -2.52464   GGCTTTTGTAATTCA       CCAGA-GGTTCC CTAGCGT GAAACCGTCTGG       GCACTGCGCTCGGTG  43 7
TspCOW1_18840 NONE
TspCOW1_18830 NONE
      tadA_2 NONE
TspCOW1_18810 NONE
        tadC NONE
TspCOW1_18790 NONE
TspCOW1_18780 NONE
TspCOW1_18770 2033510 .. 2033538 -  -4.5  -4.08767   GCCACCCTGGCAAAA        CATCTGGCCGGCA GCA TGCCAGCGAAATC        CGGGGTATGTCCCGG  62 524
        aroQ NONE
TspCOW1_18730 2030573 .. 2030592 -  -4.3  -3.12895   TTTTCCACCAACATA            TGCGTTC CTCCCT GAACACA             TTAATATTTTTCCGT  45 78
TspCOW1_18720 NONE
        accC 2028657 .. 2028684 -  -5.4  -2.58215   CAGGACTAAAGACAT        CGTCATCCCCGC GCAG GCGGGGATCCAG         CAGCCGCGGCGGTTT  46 140
        prmA 2027615 .. 2027649 - -10.6  -3.06418   CCTGGAGAGAAAGTA     GGATGGGTGAAGGCGC GCA GCGCCGCAACCCATCG     CCGGTAACGACGCGG  66 72
TspCOW1_18690 2026714 .. 2026734 -  -6.7  -2.85999   GGACGGCACATGATA            CCCGCTCGC CCG GAGAGGGGG            AAGCACGCCGGTCGG  49 66
        dusB NONE
TspCOW1_18670 NONE
        purH 2023508 .. 2023537 -  -6.3  -2.98823   TTGGCCGCAGAGACA       TCTGGATCCCGGC ATAC GCCGGGATGACGA        GAAACAGACTGGTCA  51 96
        purD 2021863 .. 2021873 -  -3.2  -2.62936   AATGACGTAATTAAT                 CAGA GGT TCCG                 CAATATTCTGTGCGT  40 240
        rhlB NONE
TspCOW1_18610 NONE
        gspD NONE
        xcpR NONE
        xcpS 2012275 .. 2012292 -  -6.3  -2.58236   CAAAGGGATATGAAT             GGT-GCTC ACT GAGCTACC             CGGCCCTTTGAATCG  48 163
TspCOW1_18570 2010864 .. 2010877 -  -3.1  -4.90778   CCCATTGAAATAAAA               GTGAA TCGA TCCAC                GGGCCCGGACAGGCC  76 150
TspCOW1_18560 2008138 .. 2008149 -  -5.8  -2.66733   TGGCAAGGGAGATGA                CCGA CCTG TCGG                 AGGCGGAACTGGACG  44 280
TspCOW1_18510 2001598 .. 2001619 -  -2.1  -3.33241   GAGTAAGGAGAAAAC           CGGGACGGC AACA GCCATCACC            CCCACTTACCCGTCA  46 157
TspCOW1_18500 1999860 .. 1999892 -  -9.1  -2.77701   ACGTCACCAACATCA     GCGACGGCG-CCGGC CAGAC GCTGGACGCCG-CGC     GCCAGAGCGCCTGTG  55 198
        ilvD 1996004 .. 1996024 -  -6.7   -3.1247   ATGCTGCAGATGGAA            CGCGAGCAG CAG CGGCTGGCG            CAGGAGAACGAGGCC  52 454
TspCOW1_18460 NONE
TspCOW1_18450 NONE
TspCOW1_18440 1993050 .. 1993074 - -12.1  -3.08015   CGAAGGATTCGAACA          CCACAGCGAGG ATG CCCAGCTGTGG          TACAACCGCGGCTAT  69 302
       xth_1 1991948 .. 1991964 -  -7.2   -3.8448   TAAGATAGCAGGAAA              CGCGGC GGGAA ACCGCG              TCGGGATCACAGAAT  66 82
TspCOW1_18410 1990466 .. 1990484 -    -8   -3.8211   CGGCAGGGAGAATAA             TCCGGCGC AGA ACGCCGGT             CAGGCCGCCAGCTGT  68 25
TspCOW1_18350 1986274 .. 1986305 - -15.8  -3.10164   GTACTGATCAGTGAA      CGTCCGGGG-GCAGC GCA GCCGCGCCCCGGGCG      CACGCCTTTCCCCAC  78 452
        ctpH 1983789 .. 1983801 -  -4.8  -3.68962   TGGGAATACATACAA                CGTG TGCTG CACG                AGCACGATTACAACA  55 172
TspCOW1_18300 NONE
TspCOW1_18290 1978047 .. 1978090 -    -8  -3.14132   CGTCCCTGCCACGAA TGGCCTGGGCGCGGGCGCGGC AAG GGCAAGCCCG-ACCCAACCCA GCAGGCAGGCCATCA  57 71
TspCOW1_18280 NONE
TspCOW1_18270 1977225 .. 1977248 -  -9.4  -2.78384   TTGCGTCGCAGGATA          CGGTCTCGCC CGCC GGCGTGCCCG           GGGCCGGCTGGCACT  61 160
         rsd 1973535 .. 1973554 - -13.6  -3.07787   AACATGAGGCGAACA            GGCAGGTG ATCA CACCTGCC             TGTTACACGGCTGCC  79 78
         fbp 1971532 .. 1971586 - -10.8  -5.40072   CCTGCTGGAAAAAAA GAAAGCCGGCG-AGATCTCCAGGCTGG AAAA CCTGC-TGGAGCTCGGCGCCGGC-TTC TATATCGAGTTCTGA 100 147
        zapE 1969077 .. 1969112 -  -8.2  -3.57144   CCGGGCAGTCGCAAA    CCGGCCTTGAGGCC-CT CAG AGCGGTTTCAGGGCCGG    TGGGCACGGGCCAGA  62 16
TspCOW1_18130 1966969 .. 1966987 -  -4.4  -3.29829   TATATCCTGCCAGAA             GGCTGGGC GTG GCTCAGTC             CTCCAGCCATCCCTG  49 20
TspCOW1_18120 1966196 .. 1966247 -  -2.9  -3.01712   GCGGCTGGTGGAACA GCCGCCCTACAGTTCGCAGCGCAAC TTCG GTT-C-CTGCGCCCTGGAGTGGGGC TGGATGGCGGCCGGA  42 248
        idiA 1962746 .. 1962770 - -17.1  -3.90744   GTGGCCCGCAAACAA          CGGCGGGGTGC CGT GCACCCCGCCT          GGACAGATCCTCGGC 100 58
TspCOW1_18080 NONE
TspCOW1_18070 NONE
TspCOW1_18060 1959068 .. 1959108 -    -4  -3.61164   AAGGTCTCAAAAAAG CACGTA-GGTCGGGTTA-GC GTA GCGTAACCCGACAGCCCGCG GCATGTTGGGTTACG  51 122
TspCOW1_18040 1957881 .. 1957892 -  -3.6  -2.57132   TTGCTTGTTCAGAAT                CCCG TAGG CAGG                 GTTGGCGCAGCGTAA  42 157
TspCOW1_18010 NONE
        ascD 1955431 .. 1955468 - -13.5  -3.36505   ACATGCTATCGATAA   TATTTCATGCCG-GGCGC AAA GCGCCTCGGCATGCATTA   TGAAATTTCCGTGTT  83 74
TspCOW1_17970 1951955 .. 1951972 - -14.1  -3.34043   GGCACCACTGCAGAA             CCGGCCG GCAG CGGCCGG              TGCGAGCAAACCGCA  87 465
TspCOW1_17900 1947962 .. 1947977 -  -2.6  -2.68607   CGGAAACAAACACAG              TCGT-TG ACT CAGACGA              ACAGGGACAGGGGCG  38 18
TspCOW1_17890 1946372 .. 1946414 -  -7.7   -3.0782   GAACCTGTGAACACA GTGGCATCTG-GATCCCGGC CTGC GCCGGGATGACAGAAAACAC GTAGTCCCGTAGGTC  57 139
        znuA NONE
        znuB 1944508 .. 1944523 -  -3.3  -3.06515   CCGCAGCCGGAAAAC              TGTGA TTGATT TCACA               CGCCTGTCCGTCCCC  43 44
TspCOW1_17860 1943561 .. 1943592 -  -4.3  -2.94726   CGGGAGAAGATGACA      TTTCCAGCTCCGG TGATTT CCGAGGCCGGACA       GTGTGCAACAGGCGA  44 253
TspCOW1_17850 1941976 .. 1941999 -  -3.8  -3.59979   CCCGGCGAGTCGAAA          CAGGCCAACA TCGG CATCAGCCTG           CCCGGCACCGGCGAG  51 328
TspCOW1_17830 1940168 .. 1940214 - -10.9  -4.59109   CAGACCGTTGAAAAA CCCTTTATTCCCCTCTCCC-CC GCGC GGTGGGAGAGGGGAATGACATG ATGCTGCCGGGAAGT  93 63
TspCOW1_17800 NONE
TspCOW1_17790 1937426 .. 1937436 -  -3.2  -3.10715   GCCACGATCACGGAA                 TCAC CCC GCGA                 ACAGGCCCTTCAGAT  43 15
TspCOW1_17780 1936179 .. 1936202 -  -2.4   -3.2511   CTGCAGGCACAAAAC          GTCAACGCCTA TGA TA-GCGTCGGC          AATCCTATCAGCGGT  44 101
TspCOW1_17750 1928011 .. 1928041 -  -4.9  -2.88571   CCGCCCAAACATAAT      TATCGCTAATGACA AAAA CATCATT-GCGATA       CCTATCCAGCTCTTA  46 254
TspCOW1_17740 1925716 .. 1925731 -  -2.6  -3.93148   CAACCAAAGCAAGAA              TAAATC CAAT GATTCA               AGCATGCGATGAGTG  53 156
TspCOW1_17730 NONE
TspCOW1_17720 NONE
TspCOW1_17710 NONE
TspCOW1_17700 NONE
TspCOW1_17690 NONE
TspCOW1_17680 1919687 .. 1919701 -    -5  -3.31511   AACCAAATAGCAATA               TTCCCA AGA TGAGAA               TCGTATTAGACTTGT  49 44
TspCOW1_17670 1918486 .. 1918503 -  -2.7  -2.52896   TTACTTTTTAACGCA             GGTCT TTCCACCC AGACC              ACACAAAAAATGCCC  38 194
TspCOW1_17660 1916242 .. 1916257 -  -4.6  -3.02144   GGACGTCCCGGAATA              TCGGCG TTGA CGCCTA               CCGCATCCCTGTGGA  45 457
      lexA_1 1914608 .. 1914620 -  -3.3   -2.9155   TCCTCCAACATGATA                CTGAC GGG GTCGG                GAGATCGGTCAGCGG  42 34
        dinB 1912773 .. 1912795 -  -5.4  -3.29144   CGAGGCCGCCGACAA           GGCCACCCAG GCG CTGGAGGGAC           TCCCGACGTCGCAGT  51 508
        rplU NONE
        rpmA 1910997 .. 1911018 -  -6.5  -5.45802   TCCTGAAAATAAAAA           GCCCCGA ACGCACTG CCGGGGC            TTTCTCTGCAGCAGG  95 56
         obg 1909589 .. 1909618 -  -4.9  -3.14132   GGTTGCCCCCATTAA       TCGTCATTCCGGC GAAG GCCGGAATCCAGA        TACCGCTGTGGTCAC  47 148
        proB 1908224 .. 1908252 - -16.1  -4.09685   GCGGATTGCGCAAAA        GAAAAGGCCGGTC ACT GACCGGCCTTTTG        CGTTGGGGTTCCCTG 100 145
        mviN 1906069 .. 1906079 -  -2.4  -4.11585   ATCCATTATAAAGAA                 CCTG CCC CCGG                 GATCATACGTCCCCG  59 28
TspCOW1_17540 1904747 .. 1904786 -  -8.6  -4.21471   ACTGCAAAACAATAA  TGTAGGTCGGGTTA-GCCC GAA GGGCGTAACCCGACGTGGA  GCCGCTCCTGTGTCA  78 197
        ileS NONE
        lspA NONE
TspCOW1_17510 1900750 .. 1900803 -  -6.2  -3.09635   ATTGCGAGGAGCGAA GCGACGTGGCAATCCCGTAAAGCA GAATCAAT TGGTTG--GAGATTGCCACGTCGC TTCGCTCCTCGCAAT  52 120
        ispH 1899752 .. 1899798 -  -7.9  -2.52543   ACTGCTGGTAAGGCA GGCT-CCGGCGGCCCGGTCAGTC TAG GACTG-CAGGGCCCGCGGCAGCG AAAACACCACCTCTT  53 0
TspCOW1_17380 1889039 .. 1889054 -  -3.2  -3.18264   CTGTGTATTCATCAA              CCTCGCC AAC AGCG-GG              CACCGGCAAACCCCG  45 6
TspCOW1_17370 1887901 .. 1887911 -  -2.4  -3.35046   CCAGCCCCTGAAACA                 TGGC CTG GCCG                 GACCCGATTTACCCA  46 34
TspCOW1_17360 1887329 .. 1887357 -  -6.6  -3.20991   GTGAAGCGAACGCAA        CCCATCGCAGCG GTTGG CGCAATGATGGG        TTAGGGCATGCGCCT  54 84
TspCOW1_17350 1886719 .. 1886732 -  -3.8  -4.03234   GGGTGCTGACATAAA               CGGA TCCTTG TCCG                GCTCAGTCGTCGCGC  60 28
        amaB 1885259 .. 1885275 -  -2.9  -2.61582   CAGGGTACTCATAAT              GAAGCCC GAA GAGGTTC              TATGAGCGTAGCGCG  40 221
TspCOW1_17330 NONE
        dur3 1882920 .. 1882943 -  -8.8  -3.47227   CGCGAATCAGCATAA          CCAGCAGCGCC ACC GGCGC-GATGG          CGGTGATCACCAGGG  64 80
      pyrB_1 1881532 .. 1881581 -  -4.9  -5.27923   TAATTGCATAAAAAA CGGACGTAGGTTGGGTCA-GGTGC ACA GCACCGTAACCCAACATGCCGCGG GTTGTCGGGTTACGC  86 253
      asnB_2 1879400 .. 1879453 -  -8.7  -2.87132   GGCGGTCTTTAGATA CCCCCTCACCCTGACCCTCTCCCCCT GAT AGGGGGAGAGGGG-ATTGTTTTGGGG TCTCTCTCAGGCGGC  59 32
TspCOW1_t00300 1879192 .. 1879208 -  -7.2   -4.8048   CGTCTACATGAAAAA              GCCCAC TCGCG GCGGGC              TTCATCAACTCATTG  84 47
TspCOW1_17290 1875484 .. 1875502 - -11.7  -5.07275   TGACAGACACAAAAA             GGCCACC GTAAA GGTGGCC             TTTTCCAATAAGGGG 100 113
        nrtA NONE
        nrtB NONE
        nrtC NONE
        cynS 1868037 .. 1868082 -  -7.6  -2.55544   CGAGGAGCGAAGCGA CGTGGCAATCTCTAACCG ATTAATTCTG CTGTATGAGATTGCCACG CTACGCTCGCAATGA  53 102
TspCOW1_17210 1866682 .. 1866717 -  -6.8  -4.53034   GTGACAGAAGGAAAA    CTTCC-CGGCGCGAAGC AAT ACTTCGCACTGAGGCAG    GGGGTGGGGCAGCCC  76 59
TspCOW1_17200 1865619 .. 1865639 -  -5.3  -3.06796   GGGGACTCGAGCGAA            CGGGCGG CCTGCTC CCGCCCC            TGCGCCATGCGCCCA  49 210
TspCOW1_17190 1863719 .. 1863733 -  -2.8  -4.30978   CCGAACGTATGAAAA               TCATGA TGA TCAGGA               TTCCAGGGCTCGCAA  64 171
TspCOW1_17180 NONE
TspCOW1_17170 1859243 .. 1859265 -  -6.3  -4.48221   TATCAACCTACAAAA           CCATGTCAG ACAAA CCGACATGA           CAGTCACTGCCGCAT  74 138
TspCOW1_17160 1858269 .. 1858315 -  -7.3   -3.9749   ACGGACAAGAGTAAA TGCTGTTCACGTTGCC-GGGCGC ATA GCGCCCTGGCAACGC-AGTAGGA TTTTCCGTGCTTTCC  68 83
TspCOW1_17130 1854194 .. 1854240 - -17.4   -2.9953   TCAAGGAGAACCACA TCGCCGCCGCC-GGCTCGATCGC CGCG GCGATCG-GCCAGGCG-CGGCGC CTGCACGCGAGCCTG  82 392
TspCOW1_17090 NONE
TspCOW1_17080 NONE
TspCOW1_17070 NONE
TspCOW1_17060 1848491 .. 1848508 -  -5.5  -4.16904   AATATTACAGATAAA             TGACAGC CTGC GCGGTCA              GAAGTCATTGGGATT  66 63
        phoB NONE
        phoR 1846330 .. 1846348 -  -3.8  -4.17089   TGTAAATGTGGAAAA             CCCGATGT CAG ACATCATG             AGGAGAGATTCTGCG  62 83
        pstS 1845259 .. 1845282 - -19.6  -5.14563   CGCTGCATGAAAAAA          GCGGCCTCCG TCAC CGGAGGCCGC           CTGTCTGTCGTCCCT 100 60
TspCOW1_17010 1842956 .. 1842975 -  -3.4  -4.60487   CACCATTCTGAAAAA            CGGCATCG AATT CGCCGCCA             CCTATTTCATCATGC  71 183
TspCOW1_16950 1836366 .. 1836414 - -13.1  -3.38812   TCGCGGTGAAGAACA TCATCGACCGGCGCCGCGC-CCG CCGAC CGGTGC-CGGCGGCGGCCGGCGA GGCCGCCACGGCCTG  79 52
TspCOW1_16870 1827691 .. 1827718 - -16.3  -5.24531   ACCGCCCACAAAAAA        CCGGCCCAGAG TATAAC CTCCGGGCCGG         TCCTGTGGCGACTTC 100 50
         dcd 1826678 .. 1826690 -  -2.6  -4.30576   GCTGGAGCAGGAAAA                CCGC TTCCT GCAG                GAACACATCTCGATC  65 414
TspCOW1_16820 1819999 .. 1820009 -  -6.8  -3.53012   TGTCTGTCCGCCAAA                 GCTG ATT CAGC                 GCTTCTCCACCGCAT  60 21
         zwf 1818448 .. 1818489 -  -6.5  -3.08312   AACCCATCGACTCAA CGCGTCATGATGGGTTGCGC TGC GCTCCACCCATCCT-ACCCG GCTTCAGCCATCCGT  52 29
         pgi NONE
TspCOW1_16790 1815861 .. 1815872 -  -7.2  -3.01924   CATTCCTCTGGAACA                GCCG TCAC CGGC                 TGTCTCAAGCGACCT  54 323
        miaB NONE
TspCOW1_16770 NONE
        ybeY 1812577 .. 1812600 -  -6.8  -2.76322   TCAGGGAACACATGA          CAGTTCATCC ACGG GAATAAACTG           TGATCTGATCCCTTA  51 238
TspCOW1_16750 NONE
         lnt NONE
TspCOW1_16730 1808959 .. 1809014 -  -3.3   -3.4642   GCCAAGCAATAAAAG GCGGTTC--CGTAGGTCGGATTA-GCCC GCA GGGCGTAATCCGACGCCCGCTGCAACGC TCCGCCGCCTGTCGG  47 83
        leuS NONE
TspCOW1_16700 NONE
        holA 1803753 .. 1803771 -    -3  -4.56597   CTGCTCCTGGAAAAA             CCAATCCG CCA CGGAATCG             CACGCGTTTCCAGCT  69 173
        proA 1801973 .. 1802010 - -11.1  -3.01712   CCCGCTCGGTCAACA   GCCGGGC-CGGCGCGCCC GCC GGACGCCCCCCGCCCGGA   CGGGCCATCACCAGC  68 449
TspCOW1_t00290 1801783 .. 1801801 -  -3.1  -3.67597   TTGGGGATTCAACAA             TACAGAC GGTTG GCCTGCA             GATATTCGAGCACGG  52 156
        rsfS NONE
        rlmH NONE
TspCOW1_16650 1800173 .. 1800217 - -11.6  -3.06501   CATACCCGCACCGAA CCTCGTAGGTTGGGTTA-GCCC GGA GGGCGTAACCCAACATTC-AGG CCGCGTTTGTTGGGT  69 108
        cafA NONE
TspCOW1_16630 1794772 .. 1794807 - -13.1  -2.87468   GTGCAGCATATCACA    GGCCGGGGCAGGGCC GGTCAT GGCACGGTCCCGGCC     GGGGCCGCCCCGGGC  74 7
TspCOW1_16620 NONE
TspCOW1_16610 1793563 .. 1793586 -  -4.6  -2.56596   CCGGCGATGAATTGA          GTGTAG-CAGT GTT ACTGACTGCAC          TTGATCCGGCGATGC  43 13
TspCOW1_16600 NONE
        sugE 1791437 .. 1791452 -  -8.2  -2.75064   GTCGGGATGGAATCA              CCCCGG AGAC CCGGGA               AACCTTCACACGTCT  54 222
TspCOW1_16580 NONE
TspCOW1_16570 NONE
TspCOW1_16560 1789281 .. 1789293 -  -3.3  -4.04482   GGGGCGAAAAAAAAC                GTGGC ACC GACAC                CGGCTCCGGCTGAAA  58 172
TspCOW1_16550 1786457 .. 1786473 -  -6.5  -3.65294   GCTGATATAAATCAA              CCGGC GCGGCCT GCCGG              CAGCCGTCACCGCAC  61 32
TspCOW1_16540 1785948 .. 1785970 - -15.6  -2.73721   ACGAACCCTGAATTA           CCCTCTCCCA GGG CGGGAGAGGG           CGAAGGGACGACAGC  83 54
TspCOW1_16520 NONE
        pmbA NONE
TspCOW1_16500 1783452 .. 1783497 -  -2.7  -4.08692   GAAGGTGGGTTAAAA CGCCCCGAAGCCTGACATGGAC ACATG ATCCATG-CAGG-T-CGGGTCA GCCGCAGCGTAACCC  56 112
TspCOW1_16480 1781135 .. 1781145 -  -8.2  -3.04144   GGCGGATGCGCAACA                 GCGC GCA GCGC                 GGACACTGCATCAGC  57 36
TspCOW1_16470 1780424 .. 1780452 - -13.1  -2.88544   TGTGATTTCCACACA        GGTTGGGCTGAGC CAC GCGAAGCCCAACC        TACAATGGTTTGTCA  74 140
TspCOW1_16290 NONE
TspCOW1_16280 NONE
TspCOW1_16270 NONE
TspCOW1_16260 1764683 .. 1764704 -  -2.1  -3.19246   TGAAGGTGAAGGTAA           TGGCACCGGG GAT CCCCG-GCCG           GTTCAGTCCCGCGCC  44 28
TspCOW1_16250 NONE
        murA NONE
        hisG NONE
        hisD NONE
       hisC1 1759748 .. 1759759 -  -5.8   -3.4072   CAGGGGGCAGGATAA                GGCT AAAG AGCC                 CTAGTCAGGTCTGTG  53 118
TspCOW1_16170 NONE
TspCOW1_16160 NONE
TspCOW1_16150 NONE
         hda 1753271 .. 1753310 - -20.2  -3.37975   AGGGACGAGCTATAA  CGCAGGTCGGGTCA-GCCT GAA AGGCGTAACCCGACCTACG  TACTGCACCGCTGCG 100 86
TspCOW1_16100 1751415 .. 1751435 -    -4  -2.61912   GCACTGACGCAGAAG           TCCGTTCCC TGTC GAG-ACGGA            TGAGACAACCGGTTT  42 40
TspCOW1_16090 1750484 .. 1750501 - -14.1    -5.626   CATCGCATAAAAAAA             CGGGGCC TTGC GGCCCCG              TCTGCGAGTTGATCG 100 52
TspCOW1_16070 NONE
TspCOW1_16060 1747608 .. 1747635 -  -3.4  -2.62613   GGGCAGCGCAAACAC       CGCG-GGCATGC GTATCA GC-CGCCACGCG        CCTCGCTGCGGCGTT  40 12
TspCOW1_16050 NONE
TspCOW1_16040 NONE
        acyP 1744856 .. 1744872 -  -9.3  -3.71848   CGTGCGCACCAACAA              GCGCCTG CAG CGGGCGC              GCCGGCGGGTGGAAC  68 355
TspCOW1_16010 NONE
        rseA 1742147 .. 1742171 -  -2.1  -2.57931   GGGACGCGGGAGAAG         CGGAGCATGC GTCAGT GC-TGCTCCC          GGTCATAGCCCACAA  38 12
        mucB NONE
TspCOW1_15980 1740597 .. 1740613 - -11.5  -3.43033   CATCAATATACAACA              CCCGGCC TGA AGCCGGG              CTGAACAGCCTTCAG  73 37
TspCOW1_15970 1739065 .. 1739102 -   -22  -3.55444   GGGTCATGGCCGAAA   CCCGGTGCGGCCCCGG GGCGAA CCGGGACCGCACCGGC    GGCGGCTTACTCCGG 100 32
TspCOW1_15960 NONE
        lepA 1736795 .. 1736827 -  -8.4  -4.08571   CTATAAGACCAGAAA     CGCCGTCATCCCCGC GCAG GCGGGGATC-CAGCA      CCCGCGGCGGTTTAT  75 101
TspCOW1_15940 NONE
TspCOW1_15930 NONE
         rnc NONE
         era 1733732 .. 1733759 -    -7  -2.78384   TTCGCCCGGATTACA        TGTCGGGTT-ACG CTG CGCCAACCCGACC        TACGGGGCTGCGGGA  51 114
        recO NONE
        pdxJ 1732119 .. 1732132 -  -2.3  -2.69799   CGATGCCATAGATCA               GAGCC ATCG GGTTC                AGCGCCGCGCCGCGA  38 24
        acpS 1731307 .. 1731334 -  -9.8  -3.55563   ACCGTATCTGGGAAA        GTGTGCGGCGCTG GAC CCGCGCCACAC-C        TGCCGCGCCCGAGCC  67 424
        cysM 1724940 .. 1724952 -  -5.5  -3.62704   CAATACAAGGAAATA                CCAAC GGC GCTGG                CGCAGGAGCGGGCGC  55 45
TspCOW1_15830 NONE
TspCOW1_15820 NONE
TspCOW1_15810 NONE
        rlmD 1719942 .. 1719982 - -11.2  -2.61582   GATGGGATGCAGAAC CCG-GTGGGTCGGGTTA-GC GCA GCGTAACCCGACACTCACGG CGGGAAGGTCGGGTT  66 80
        ntpA 1712334 .. 1712357 - -10.2  -3.87641   AACAGGCTCCATAAA          GGACCCGGCC GCGG GACCGGGTCA           GCCCTTCATCGGCGC  77 67
TspCOW1_15730 NONE
TspCOW1_15720 NONE
        ruvC NONE
        ruvA 1708796 .. 1708831 -  -4.6  -3.53563   ACATGGTCCGCGAAA    CCTGTCGGGTTACGCCC TCA GGGC-TGACCCGACCTA    CGGTTATGCCCCGTC  53 54
        ruvB 1707553 .. 1707578 -  -6.7  -2.88249   GATATCGCTCAGACA         TGGATGCCCGC CTTC GCAGGCAACCG          GCGCCTGCCCGCTGT  51 41
TspCOW1_15680 NONE
        tolQ NONE
        tolR NONE
TspCOW1_15650 NONE
        tolB NONE
TspCOW1_15630 NONE
TspCOW1_15620 1702217 .. 1702259 -  -7.5  -3.12351   CGGCGGCAGATCCAA CCGGCCGGA-CGGCCCGGCC TAAC GGCCTTCCCGGTTCAGCCGG GCCAGCCGCTCCTCG  54 1
        queE NONE
        queC NONE
TspCOW1_15590 1699474 .. 1699489 -  -8.2  -2.73067   CCGAATCATACAGCA              GCCCGC CACC GCAGGC               AAAGACGGCGTGCTA  54 38
TspCOW1_t00280 1699337 .. 1699367 - -16.9  -5.71712   GTTGAGACAAAAAAA       TACGGCGTCCACG TGGAT CGTGGACGCCGGA       GATGGTGGGCCGTGA 100 28
TspCOW1_15570 NONE
TspCOW1_15560 1696429 .. 1696444 -  -3.2   -3.3903   GAAGTATTGAATCAA              TCCAGC GGCT GCTTGA               TGCTCACCGCACCGC  47 6
TspCOW1_15550 NONE
TspCOW1_15540 NONE
TspCOW1_15530 NONE
        cydB 1693172 .. 1693186 -  -2.8  -3.61356   AGGATCCAGGTGAAA               TACCAC ATC GTTGTA               TCCTCTCTCTCAATA  49 35
TspCOW1_15510 NONE
TspCOW1_15500 NONE
TspCOW1_15490 NONE
TspCOW1_15480 NONE
TspCOW1_15470 NONE
TspCOW1_15460 1688174 .. 1688197 -  -4.4  -2.79183   CCGATCTGCAGCACA          CGCCGGTGGA TCGT TCCGCCTACG           AGACGCTGCTGAGGG  43 162
        gpmA NONE
TspCOW1_15410 1685036 .. 1685055 -    -7  -4.89966   ACACGGAAAAACAAA            CCGGGACC GAGT GGCACCGG             CATATGCTCAAATGC  87 191
TspCOW1_15370 1681805 .. 1681827 -  -6.8  -2.56596   TCTTTGATTAATTGA           GGCGGGCGCC TGC GACGACCGCG           CCATTGCCTACGGCT  50 107
TspCOW1_15360 1679457 .. 1679467 -  -4.6  -3.58726   GCCCGGCAGACACAA                 GCAG ACC CCGC                 TCAGCCAGACCAACA  53 77
        hmuA NONE
TspCOW1_15340 NONE
TspCOW1_15330 NONE
TspCOW1_15320 NONE
TspCOW1_15310 1673818 .. 1673828 -  -2.4  -3.42503   CCTCAAGATTCATAA                 TCCG CTC CGGT                 TGCGATAACGCAGCA  46 9
        hmuV NONE
TspCOW1_15290 NONE
TspCOW1_15280 1670768 .. 1670778 -  -2.4  -3.33815   ACCGGGCCGAATGAA                 CCGC TAG GCGT                 ACAACCGGCTGTACA  46 18
        metE 1662689 .. 1662720 -  -4.3  -3.96624   TATTGTTAGTAGAAA      GAGC-GGGCAGCAG GACGG CAGCCGCCCCACCC      GTCACATGGCCGTGC  60 159
        femI NONE
        fecR 1661001 .. 1661046 - -11.2  -2.61216   CGAGGAACGAAGTGA CGCGGCAATCTCTGACCG GCTGATTTTG CGGTATGAGATTGCCACG CTTCGCTCGCAATGA  66 114
TspCOW1_15210 1658485 .. 1658501 -  -2.9  -3.85817   AGCCGCGTTCAGAAA              TCGAGCT CGT AGCTCAG              GGTGAAGGTGCGCCC  55 2
TspCOW1_15200 NONE
TspCOW1_15190 NONE
TspCOW1_15180 1656186 .. 1656199 -  -3.7  -3.68351   GCGCCATTAGCGAAA               GGGGG CGAG CCACC                GCAGCCAGCCGGGCT  54 3
TspCOW1_15170 NONE
TspCOW1_15160 1652904 .. 1652928 - -11.3  -3.72576   GCCTGCGTGACGAAA          TGGCCGCCGCC ATC GACGACGGCCT          CACCCTCAGCGAGGC  73 402
TspCOW1_15080 1645038 .. 1645069 -  -8.1  -2.73721   AGCAATTTTGAAGTA      CGCACTTATACGG GATGAT CCGTATAAACGCA       AGTCCGGCCCGACGC  54 98
TspCOW1_15070 1644633 .. 1644650 - -14.1   -5.5112   GCCACCAACAAAAAA             GCCCCGC TGAT GCGGGGC              TTTTTTTGCTGCCGT 100 75
TspCOW1_15050 1641349 .. 1641374 - -19.1  -3.18452   AGGACCTGAACGCAA         CAGGGGCCATG TCAC CATGGCCCCTG          TGCCGGCGTGTTCCC 100 75
TspCOW1_15040 1640289 .. 1640306 - -14.1  -5.72616   ACGGACACAAAAAAA             GCCCCGC TGTC GCGGGGC              TTTCGAGCTGGATCC 100 57
TspCOW1_15030 NONE
TspCOW1_15020 1637600 .. 1637628 - -13.2  -4.07568   TGTGTGTCCTGAAAA       CGACAAACCCGCC TTAA GGCGGG-TCGTCG        GAGAATCGTACCGGG  91 57
TspCOW1_15010 NONE
TspCOW1_15000 1633186 .. 1633196 -  -2.6  -3.65782   CAGCAAACGAGAGAA                 TATA AAA TATA                 TTAATGTGGCTATCC  51 43
TspCOW1_14990 1632010 .. 1632057 -  -6.2  -3.30619   AAGCAGCTTCCAGAA CCTGTA-GGATGGGTGAAGGCGC GCC GCGCCGCAACCCATCAGCACATG CCGCGCCATGATGGG  54 73
TspCOW1_14980 NONE
TspCOW1_14970 1630086 .. 1630108 -    -4  -3.61715   CACCTTTCTGAACAA           GTTCCTCATC ATC GACGAGGCTC           AGAACCTGACCTCCA  51 434
        dapA 1625651 .. 1625663 - -10.5  -3.32844   TGCTTCAGTCCACAA                CGCCG GCC CGGCG                CAGGGCTTCGGTCAC  69 2
TspCOW1_14910 NONE
TspCOW1_14900 1623616 .. 1623656 -  -2.6  -3.72893   GATGGGTGGAGCAAA GCGCAACCCATCATTGG TAGGTGGT CCG-TGATGGGTTACGG  CGCCACGAGGCGCCT  51 70
        purL 1619425 .. 1619455 -  -4.7  -2.64243   TGATATTTCAGACCA      TTGTCCGCAGATGC CATG GCATA-GCGGACAG       CCTGCTTTGTTATTT  43 184
        msrP NONE
TspCOW1_14870 1618155 .. 1618174 -  -2.7  -3.28924   GACGCGCTGCCAGAA            CACGGGA ATACCG CCCCGGG             GACTAGCCCCCGCTA  44 28
TspCOW1_14860 1617563 .. 1617577 -  -2.8   -4.3295   CGGAAGAAAATTAAA               GCGA TTTATTT TCGC               CCTGACGATTCATTC  64 6
TspCOW1_14850 1616962 .. 1616978 -  -2.9  -2.53876   CGCGACCGGAACCGA              CTTGAGC GCT GCCGAAG              CGATGGCAGAGAACT  39 354
TspCOW1_14820 1613470 .. 1613480 -  -2.4  -4.08767   CTGAGTTGCTGAAAA                 TCGG GGC CCGC                 GCGTGCGGTTGTTCG  56 385
       glyA1 1612135 .. 1612180 - -14.4  -3.07233   GCACAAGTCGCAAGA TGCAGGATGCAAGCATGAGCAAG CGA CTTGC-C-T-CTTGCATCCTGCA TCTTGAATCTATTGT  83 34
        nrdR NONE
        ribD 1610333 .. 1610359 -  -3.7  -2.75343   CCTACATGGCTAAAC        CGTCATTCCCGC GAAG GCGGGAATC-CA         TTATCCGCTGTGGTT  43 150
        ribC NONE
        ribB 1608291 .. 1608324 -  -7.5  -2.87132   TCCTTCGGTTATACA     TTCGTCATTGCGA-GC GAA GCGTGGCAATGACGGA     ACAATTCAATCCGGC  53 31
        ribH NONE
        nusB NONE
        thiL 1606219 .. 1606265 -  -5.1  -2.87132   CCCCTGTGGCAGACA CGCAGTAGGATGGGTGGAGGCAC CGT GTGCCGCAACCCAT-CAACAG-G TCGTACCACGATGGG  46 62
        pgpA NONE
TspCOW1_14720 1604569 .. 1604589 -  -5.4  -3.18383   ATCTGGATCGAGGAA            CTGATCGA ACTGG TCGAGCAG            GAAGCCTCGTGCGAA  49 350
TspCOW1_14650 NONE
        hlyD 1596018 .. 1596028 -  -6.8  -4.91109   CCCTTACCACAAAAA                 CCTG ATA CAGG                 TGCGTATCACGCACC  87 111
TspCOW1_14630 NONE
TspCOW1_14620 1591106 .. 1591148 - -18.6  -3.27525   GCCCGGGAAATCCAA GATCAGCCCGTCATGCCG GCCTGAT CGACATGACGGGTTGATC AGCACAGGGTCAATT 100 35
       katG2 1588517 .. 1588568 - -12.1  -3.17075   CCGTTGCGAAGTCAA GCGGACGGCCCGCCCGGCTCGCAG GGACG CTGGAGGCCGGGCGG-CCTCCAGC GCAGGAGCGGCATCG  73 42
TspCOW1_14600 1587944 .. 1587967 - -19.6  -4.48713   CTGAGCAATAATAAA          CGGGGCCGGT TGAT ACCGGCCCCG           GATGGTGCTTCTTCA 100 57
TspCOW1_14590 1586286 .. 1586317 -   -10  -3.59262   TGGCAGAGCTGCAAA      CGCTGGATCCCCGC CTTC GCGGGGATGACGCG       GCAGAAGTAGTGCCA  71 91
TspCOW1_14580 1585546 .. 1585556 -  -2.4  -3.38291   CTGACAAGGCCACAA                 CGCC GTG GGAG                 AGCCAGTGTCAGTCC  46 34
TspCOW1_14570 1584896 .. 1584909 -  -2.3  -2.75844   TGGCTCATGGGAAAC               GGATC AGGC GGTCC                TTGTCAGGGGTCATC  39 29
        parE 1582814 .. 1582824 -  -6.8  -2.57877   CGGACAAAAATAATG                 GCAG GAA CTGC                 TGAGGGTCTGCCCAA  50 197
        parC NONE
TspCOW1_14540 1579886 .. 1579896 -    -4  -2.59569   TTCGCAAACGAATAC                 TTTC CCG GAAA                 CGCCGCAAGGAAAAC  42 316
TspCOW1_14530 NONE
TspCOW1_14520 1574814 .. 1574858 - -15.2  -4.17023   TCAATCATCCTAAAA GGGGTCGGTGACAAAACGCAA TCGT TCTCATTT-GTCACCGACCCC TTTTAATTGTCGCGG 100 524
        htpX NONE
TspCOW1_14470 1566107 .. 1566117 -  -6.8  -3.17075   GCCGGGTGAAGCTAA                 CGCA GAG TGCG                 TAGGATGGGTGAAGC  54 237
TspCOW1_14450 1562761 .. 1562779 -  -9.5  -2.83403   TCCGCTGGATGAAAT             GCCCCCC GGGCA AGGGGGC             CGAACTGGGCGTGCA  56 523
         efp 1559427 .. 1559461 -   -12  -3.28791   AGCGCCGCGGCACAA     GCGAGCCTGCGAGCGC AGA ACGCCCGCAGGGCGGC     CCCGAAGGGGTGAGC  75 126
        epmA 1558154 .. 1558164 -  -8.2  -4.37886   GCAGGCGGGACAAAA                 GCGC AGA GCGC                 GTTGAACGCCGGTAT  77 237
TspCOW1_14400 NONE
TspCOW1_14390 NONE
TspCOW1_14380 NONE
TspCOW1_14370 NONE
        trmJ 1553799 .. 1553817 -  -7.4  -3.48276   TCCGTGTCGATATAA             CCGGCA TTGTACC TGCCGG             AACGGCGGGGTGACA  60 51
        cysE NONE
      iscR_1 1552355 .. 1552395 -  -9.7  -2.68823   CGTGGCGCAGACAAG CCCGCACC-GCGCC-ACGC GGCAA GCGTCGGCTCAGGCGCGGA TCGGGTCGAAATGGA  60 15
TspCOW1_14330 1552024 .. 1552041 - -12.7  -4.35348   ATAATATAACATAAA             CCCGCGT GGTG ACGCGGG              TTTGACCGGAAAGGG  93 75
         ndk 1551516 .. 1551526 -  -2.4  -2.82516   CGCGGCATCAGCAGA                 CGCC GGG GCCG                 GATTTCACTCCTTCA  39 38
        rlmN 1550369 .. 1550389 -  -6.1   -3.0497   ACAGCAGCGTGAACA            GCCCGTG CCTCATC CACGGAC            CTCCTGCACCGCCAC  52 14
TspCOW1_14300 NONE
TspCOW1_14290 NONE
        hisS NONE
TspCOW1_14270 1546624 .. 1546659 -  -3.8  -2.74523   CCAGCGTCAACAGCA    GCAGGGGCAGCAGAAC ACGC ATCAGGCCGCCCCTTC     CCCGCCGACGCGGGC  43 11
        bamB NONE
         der NONE
TspCOW1_14240 1542130 .. 1542174 - -15.1  -5.41746   AAGGTGGGAAAAAAA GGGGTCGGTGACAAAACGCAA TCA TTATCATTTGTCACCGACCCC TTTTAAAGAACATCA 100 38
TspCOW1_14210 1538267 .. 1538277 -  -3.2   -3.2794   CTTGACCGATATCAA                 TCGC CGG ACGA                 ATGCATCACCGGATC  45 11
TspCOW1_14200 NONE
TspCOW1_14190 1533208 .. 1533221 -  -5.3  -3.78934   CGCCGTGGACAACAA               TGATG CAGC CATCA                TCCGCGCCATCATCG  60 341
        guaB 1525889 .. 1525934 - -11.2  -3.53811   GTCATCCCCGCGAAA GCGGGGATCCAG-GCCTTG TTTATCCTG CCAGGCACTGGATTCCCGC CTGCGCGGGAATGAC  74 134
        guaA 1523997 .. 1524012 -  -3.3  -4.84761   ATAGTTTCAGAAAAA              CAGTA CTGTTT TACTG               AAGCACTGTGCTTGA  73 242
TspCOW1_14130 NONE
TspCOW1_14120 1523219 .. 1523229 -  -2.4  -2.51312   AACTCAGGCAGCAAT                 CGGC TTA GCCT                 TCTCGATCCGGGCCC  38 3
TspCOW1_14110 1522700 .. 1522710 -  -5.4  -2.92255   TTAATAGACAGGACA                 GACA CGC TGTC                 GCGCCGTGGAAATAG  48 61
TspCOW1_14100 1521503 .. 1521540 -    -7  -2.80935   ACCGCACCCACGACA  CCGCCCACCACAGCCGCT GCCA ATCG-CAGTGGTG-GCGG   AACAAACAGAAATGC  51 388
TspCOW1_14090 NONE
TspCOW1_14080 1519525 .. 1519559 - -10.1  -2.62396   GACGGTGGCACAGGA    TCCGGCAC-CC-AAGGT GGC ACCATAGGCGTGCCGGA    AGGTGAGCCGGAGCT  62 58
TspCOW1_14070 NONE
TspCOW1_14060 1517458 .. 1517474 -  -2.1  -3.71378   GACGTGACAGTGAAA              GTCGATC ATC GAACGCC              TGCCGCCGTTAGAAA  51 14
TspCOW1_14050 NONE
TspCOW1_14040 NONE
TspCOW1_14030 NONE
TspCOW1_14020 NONE
        arsR NONE
TspCOW1_14000 1511084 .. 1511096 -  -3.3  -3.86015   CAGTTGTGCGATAAA                CCGGA TCA TCAGG                CCCTCAACATCCTTA  55 21
TspCOW1_13990 NONE
TspCOW1_13980 NONE
TspCOW1_13970 NONE
TspCOW1_13960 NONE
TspCOW1_13950 NONE
TspCOW1_13940 NONE
TspCOW1_13930 NONE
TspCOW1_13920 NONE
TspCOW1_13900 NONE
TspCOW1_13890 NONE
TspCOW1_13880 NONE
TspCOW1_13870 NONE
TspCOW1_13860 NONE
TspCOW1_13850 NONE
TspCOW1_13840 NONE
TspCOW1_13830 NONE
TspCOW1_13820 1495494 .. 1495506 -  -2.7  -2.60075   GCTTTTCCAATGAAC                CAAAA CCC TTCTG                TGATCATTCGTAGAG  38 47
TspCOW1_13810 1494170 .. 1494189 -    -5  -3.41051   CGATGGTGAGGACAA            GTTCGG CTGAACGC CCGAAC             GGCGCATGGCCGCCG  51 51
TspCOW1_13800 1493540 .. 1493561 -  -9.4  -2.92777   TTCGACAGATCAAAG           TCACGCGC TCGCAT GCGCGCGA            GGCGTCAAAGCAACG  62 54
TspCOW1_13790 NONE
        czcB NONE
TspCOW1_13770 NONE
TspCOW1_13760 1487585 .. 1487599 -  -2.8  -3.61398   CTCCGTCGTTAACAA               TGATGT CCG ACCTCA               GTCCTCGCGGACCGC  49 50
TspCOW1_13750 NONE
TspCOW1_13740 1486605 .. 1486623 -  -2.3  -2.70932   CTTGCCTCCCAACTA            TGC-GGGC TCAC GCCCAGCG             CTGTGCCCTTGCCCC  39 107
TspCOW1_13730 1486293 .. 1486304 -    -3  -2.84325   GGCCCGTAAACACCA                TGAT CAGT ATCA                 CCACCAACAGGGTGC  41 89
TspCOW1_13720 1485849 .. 1485861 -  -3.3  -3.22874   CGCGATAGAACAAAT                CGGTC GGC GACGG                GTCCGTTTTCGTCCC  45 71
TspCOW1_13710 1483351 .. 1483376 -  -3.3  -2.72344   GGTGATGGGTAATCA         CGTCAACCGC CCAAGTC GCGGT-AACG         CAGCAAACGCAAGGC  41 2
TspCOW1_13690 1480852 .. 1480870 -  -5.2  -3.19026   CAGGGGAATACGCAA             CGCCGAAG AAC CTCCAACG             ATAATTTGGACATGA  51 151
TspCOW1_13680 NONE
TspCOW1_13670 1479452 .. 1479465 -  -2.3  -2.65815   GTCAGACTTATATGA               CCCAG CAGG CCGAG                AATGTATTCTACCGC  38 268
TspCOW1_13620 NONE
TspCOW1_13610 1475772 .. 1475792 -  -2.4  -3.76373   TCCGGAATAGCCAAA            CAGCGGGA ATCGA TCCCGTAG            AGGCTCATGACCAGA  51 141
      tadA_1 1475080 .. 1475110 -  -8.2  -2.83164   GCAGCTACTACGACA       TCCTGGTCTGGTAC ACC GAACGCGACCAGGA       ACCGGTGCCCTCACC  54 71
TspCOW1_t00270 1473004 .. 1473021 - -14.1  -4.96848   TCCGCCATATAAAAA             GGGCCCC GGTT GGGGCCC              TTTTTATATGGCGGA 100 34
TspCOW1_13570 1471391 .. 1471406 -    -6  -4.37886   TCAGCGGGGATAAAA              GGGGGC CGCC GCGCCC               TGGCTAAGTCGGCTA  72 96
TspCOW1_13550 1469439 .. 1469497 -  -4.4  -3.01712   GCGGCGGCGGCAACA GCCTGAGTGACAGCGGCGGCGGTGGCGGC GGCT GCAGCCTCGGCCGGCGCGG-CACCCA-G- GATCCTCTGTTTCCG  45 153
TspCOW1_13530 NONE
TspCOW1_13520 NONE
TspCOW1_13510 NONE
TspCOW1_13500 NONE
TspCOW1_13490 NONE
TspCOW1_13480 NONE
TspCOW1_13470 1458021 .. 1458040 -    -5  -2.52516   GCGGTGATGACGAAG            CTGAAGCA AGCC TCCTTCAG             TCCCGGTGCCCACTC  43 39
TspCOW1_13460 1455984 .. 1456001 - -11.3  -2.53263   GCTACGGCCAATGGA             TTCCCGC CTGC GCGGGAA              TGACGGAAAAGGGAA  65 146
        yghO NONE
TspCOW1_13400 NONE
TspCOW1_13390 1449073 .. 1449101 - -10.9  -2.59431   CGGCCGGACAATTGA        TGGGTTACGGCGC AAT GCGCCTCCACCCA        TCCTACCCGGCTACT  66 36
TspCOW1_13370 1446805 .. 1446842 -  -9.3  -2.52464   GGTCGGGTTAACGCA   GCGTAACCCGACA TCTCGCGGTCCG TGTCGGATTACGC    CCTCGCGGGCTAATC  59 65
TspCOW1_13300 1438527 .. 1438537 -  -6.8  -3.07895   CGGAGGGGGAAGAGA                 GTCC CCG GGAC                 AGCGCCACCCGTGGT  51 387
TspCOW1_13250 1434093 .. 1434119 - -15.1  -3.94812   TGCCAGGCAAAAAGA         GCGGGGCAGAC ACCTG GGCTGCCCCGC         GTTCACGCTCACAAC 100 50
TspCOW1_13240 1433449 .. 1433459 -  -8.2  -4.37886   GCAGGCGGGACAAAA                 GCGC GGA GCGC                 GTTGAACGCCTTTAT  77 208
TspCOW1_13220 1430739 .. 1430772 -  -3.8  -5.59502   GAAAAAATGAAAAAA    CGCGAACAGTCG-GGG CAGA CCCGCGACAG-CCGCA     TCTGCGCCACCGACC  95 165
TspCOW1_13200 1429002 .. 1429021 -  -2.8  -2.53876   CTTTATGCTAATGGA            GGT-CATCC AGC GGCTGGACC            GGCAAGATTCATGAA  39 52
TspCOW1_13190 1427841 .. 1427856 -  -4.6  -3.14132   CGCCGCCTTCATCAA              CAGCCA CGAG CGGCCG               CAGGACCCCCGGCAT  47 173
TspCOW1_13160 1425249 .. 1425265 -  -4.4  -2.71144   TATTGTTGTCAACGA              CAACAG TGAAC CTGTCG              GTATGATCACTCGCT  43 188
    dsrA-2_2 1422807 .. 1422825 -  -5.2  -3.53091   ACTCTGTTTCCGAAA             GACATCAG GCA CTGCTGCC             TTCCGCCTGTCTCTG  55 11
    dsrB-1_2 1421643 .. 1421678 - -14.8  -3.09327   GCAGGTCAGGGAATA    CTGTCAGGTCGGCG CCAAGTCT CGCCGACCTGACAT     GTGCCTTAGAACCGG  83 31
        cdfA 1419984 .. 1420004 -  -8.2   -4.8048   GCCGGATATGAAAAA            GGCTCACC CCTGC GGTGGGCC            TTTTCATGTCGGGAT  87 233
TspCOW1_13110 1417749 .. 1417767 -  -2.4  -2.72649   AGCCGATGATAGAAC             GCAACA TTTCTGT CGTTGC             TCGTGATCAGCGAAA  39 32
TspCOW1_13100 1416872 .. 1416885 -  -9.5  -3.35224   ACACGCCTTCAAACA               GCCGG CAAT CCGGC                AGCGTAGTGTATTCC  67 476
TspCOW1_13090 NONE
TspCOW1_13080 1415620 .. 1415647 - -10.6  -4.36914   CGCTCGCTGAGAAAA        CGGCAGACGCGGG AAC CCCGC-TCTACCA        CTGGGGCGACACGGA  93 467
TspCOW1_13020 NONE
TspCOW1_13010 NONE
      apaH_1 1405512 .. 1405525 -  -6.7  -3.73402   ATATCCGGCATGAAA               CGGTT CGGA AACCG                GACAACCTACCTACT  61 53
TspCOW1_12980 NONE
TspCOW1_12970 1401358 .. 1401375 -  -5.5  -2.79183   GTCATCTTTATTAGA             GGCGACT AGGA AGCCACC              CAATCTTATTCTTCG  47 253
TspCOW1_12960 NONE
TspCOW1_12950 NONE
TspCOW1_12940 1390990 .. 1391004 -  -2.8  -4.52781   CAATCAGAATGAAAA               TGACGA TAT TCGTTA               CCGACCCTGCTGTTG  66 188
TspCOW1_12920 NONE
TspCOW1_12910 NONE
TspCOW1_12900 NONE
TspCOW1_12890 1381014 .. 1381025 -    -3   -2.9176   AAGCTGATTCACAGA                TAAC TCCT GTTA                 ATGCGCAACGCCTAA  42 23
TspCOW1_12880 NONE
TspCOW1_12870 NONE
TspCOW1_12860 NONE
TspCOW1_12850 1376592 .. 1376603 -  -5.8  -3.35912   GAGGATATAGACCAA                CTGC AACA GCAG                 TTCTCGGAGTTGATG  53 245
TspCOW1_12830 1375305 .. 1375315 -  -3.2  -3.74184   AATTGAAGTCAAGAA                 GACG GCT CATC                 GTTTACTTTGAGATA  52 8
TspCOW1_12820 1374539 .. 1374549 -  -2.4  -3.07994   CTCAATGCCAGGGAA                 GGCG CAA CCCC                 CGCTCCCGCGGGGGT  41 43
TspCOW1_12810 1373427 .. 1373444 -  -9.9  -5.03314   CCGACTGCGAAAAAA             GTGTACC ACGT GGTACAC              CCAGATCTTTTGTAC 100 325
TspCOW1_12800 1370919 .. 1370932 -  -2.3  -3.84961   CATGGAATGAGGAAA               GGTCC AGGT GGAGC                GCAGCGCAGGCGGTG  54 277
TspCOW1_12780 1369020 .. 1369048 -  -8.1  -2.84566   AATATTGGATAATCA        GACCTCGGCGATT TCA AGTCGCCGATATC        GGCTATTTATTTCTG  54 77
TspCOW1_12770 NONE
         doc NONE
TspCOW1_12750 1366570 .. 1366582 -  -5.5  -4.09864   ATCGATGTCGCAAAA                GCCAT AGC ACGGC                GAAGTGGCGCAATCG  64 381
TspCOW1_12610 NONE
TspCOW1_12600 1356102 .. 1356124 -  -7.6  -3.02144   TGAGTTCGCCGAACA           GGCACAGCGT TTC ACGCTGGGCG           ATTACTGGGGCCTGA  53 213
TspCOW1_12490 1347408 .. 1347418 -  -8.2  -4.15565   CGGATGATCGCAAAA                 CCGG TCA CCGG                 GTCGTCAAGCTGGCG  72 348
        intD 1343653 .. 1343677 -  -2.8  -4.41047   ACCCGGGAACCAAAA          CCCTGTTC TGCCCAAGG GAACTGGG          CAGGATCCTCGATGA  66 502
TspCOW1_12440 1342021 .. 1342039 -  -5.2  -2.79302   AGCACCTGTACGAGA             TCGCGCAC TAT GTGGGCAA             GCTCAACCAGCGCGA  45 510
TspCOW1_12420 NONE
TspCOW1_12410 1338958 .. 1338968 -  -4.6  -2.99837   GGTGAAAGAGGAAAG                 CGGC ATC ACCG                 ATCTGCAGTTCGACT  45 321
TspCOW1_12370 1335446 .. 1335460 -  -2.7  -3.89346   CGCGGAGGTGACAAA               GGCGC TTGCT GCGGC               CGCGGCCGAGGGCGA  56 399
        rtcA 1334123 .. 1334141 -  -6.6   -3.1272   GGAGAAAACCATATA             CGCCCTGC CCG GAAAGGCG             GGGGACGACACGGTT  52 84
TspCOW1_12340 1333820 .. 1333839 - -16.4  -5.00138   GATTCAAACCAAAAA            CGCCGCCC CGAG GGGCGGCG             CCGGTTGCGGCCGAT 100 48
TspCOW1_12330 NONE
        ygdL 1332690 .. 1332720 -  -8.9  -2.62184   GTGTCCGCCAGATGA       CCGCCACCGGC TCAGTCGTC GCCGGCGGCCG       ACACGCTGCCGGCGC  57 6
TspCOW1_12310 1331920 .. 1331952 - -14.1  -3.04398   GCGGCGCGGCAAAAT      GATGGGTTACGGCGC GAT GCGCCTCCACCCATC      CTACGCCAGCCGCCG  83 26
      msrA_1 NONE
TspCOW1_12260 NONE
TspCOW1_12250 1326634 .. 1326672 -  -9.6  -3.04144   TCTGGACGCGGAACA  CGCCGGCGCGCTGCACGA CCTGC TCGGGCAG-G-GCCGGCA  GGTACCGCTGTGCCG  57 333
TspCOW1_12220 NONE
TspCOW1_12210 1322556 .. 1322566 -  -8.2  -2.53382   ATTAGGTTGAACGGA                 GGCC GCA GGCC                 GTAGGATGGGTGGAG  53 121
TspCOW1_12200 1322088 .. 1322122 -  -2.6  -3.38046   CCTTGAGTGGAAACA     TGCGGGGACGCGGC TCAGTCG GCCTCGAAGCCGCA     GGCCTTGTGGCTGGC  46 5
TspCOW1_12190 NONE
TspCOW1_12180 1320145 .. 1320163 -  -4.4  -2.72661   GACGACCGGCAAGCA             GCCAGGCC CTG GGGCTGGA             CCAGATTCCCGAGGC  43 268
TspCOW1_12160 NONE
TspCOW1_12150 NONE
TspCOW1_12140 1316989 .. 1317025 -  -5.2  -6.10489   AATTCCAAAAAAAAA   GCGTAGGTCGGGTTA-GC GCA GCGTAACCCGACATG-GC   CCGGCGCCGGATTAC 100 137
TspCOW1_12130 NONE
TspCOW1_12120 NONE
TspCOW1_12110 NONE
TspCOW1_12100 1313602 .. 1313614 -  -2.6  -3.70104   AATGATGCAAGACAA                GCCC CGGCT GGAC                TGCCCGTCCGGTGAA  51 157
TspCOW1_12090 1312471 .. 1312495 -  -4.1  -3.47227   GGTCAAGCAGGAGAA          GGGTACGGAGG CGC CATCAGAACCC          TCCCGACGCCCATTG  49 17
        relA NONE
TspCOW1_12070 NONE
TspCOW1_12060 NONE
TspCOW1_12050 1307329 .. 1307349 -  -6.7  -2.71144   GACGGCGGGGAATCA            GCCCGGCTG GAG CAGCCGCTC            GATCTTCTGCGTCAG  49 2
TspCOW1_11990 NONE
      cheR-2 1300630 .. 1300649 -  -7.8  -3.14931   GCCATGTCTTAGCAA            TGCCTGTG CCAG CACAGGCG             GAAGGCTTGTTTTTA  57 264
        flgB 1300183 .. 1300204 -  -3.7  -3.06315   CGAAGACCTTGAACA           GAGACATGA TCAT TCACCTCTC            AGCGTGGACTTGATG  45 13
        flgC NONE
        flgD NONE
        flgE NONE
        flgF NONE
        flgG 1296124 .. 1296148 -  -3.4  -2.72991   GGATATCCGGAACGA          CGTCATTGCG AGGCG CGCAGCGCCG          CGGCAATCTCCGACT  41 114
       flgH2 NONE
        flgI NONE
        flgJ NONE
        flgK NONE
        flgL 1289867 .. 1289889 -  -2.7  -4.57073   TATCCCGGCGAAAAA           CGTAACC CAACCTGCC GGCTACG           TCATTGCGAGTACCC  66 189
TspCOW1_11860 1286985 .. 1287039 -  -8.5  -2.53876   GCGCAGCGCAACCCA TCGGGCCG-AGCGATGGGTTGCGGCGC GCA GCGCCTCCACCCATC-CTACGGGACCA CTTCAAATATCTGTG  57 72
        fliC 1284938 .. 1284960 - -18.4  -2.92613   CCGGAGTTGAAACCA           CACCCGGGGC AAC GCCCCGGGCG           GGTTCACTCACCTCC 100 41
TspCOW1_11840 1284472 .. 1284489 -  -8.4    -4.258   GCAGTTAGCAATAAA             CAGGCC AGCTCA GGCCTG              CTCCCGGAACAGCAG  81 17
TspCOW1_11820 NONE
        fliS 1281594 .. 1281608 -  -6.4  -2.65354   GTCAGGTGAAACCCA               TGGTCA TAT CGACCA               GCGTCAGGATGACCG  48 131
TspCOW1_11800 1281025 .. 1281036 -  -4.4  -4.26189   GGAGAAATGTCAAAA                TTCC GACG GGAA                 AGATCAAGAGCGTCA  67 222
        fleQ 1279245 .. 1279275 -  -5.3  -2.91383   ACGGGGATCCAGATA      CCGCGCGGTTGCTGG ATT CCCGC--CTGCGCGG      GAATGACGAAAGACT  48 175
TspCOW1_11770 NONE
        fleR 1276442 .. 1276461 -  -9.2  -4.02253   GGAATAATGCAGAAA            CCGGGCCA GCTT CAGCCCGG             GATGGCGATGCCGGC  78 17
        fliE 1275962 .. 1275974 -  -4.7  -2.74322   GGCAATCTCGCAAAT                CAGGC TGT GCCGG                TTGGAGATTGCCGCG  44 77
TspCOW1_11740 NONE
TspCOW1_11730 1273191 .. 1273242 -    -5  -3.66424   TAAAAGTACCCGAAA CGTTCTGTAGGATGGGTGAAGGCGC AAC GCGCCGTAACCCATCAT-CATGCCG CCCGGCGATGGGTTG  56 74
        fliH NONE
        fliI 1271123 .. 1271137 -  -4.2  -3.35679   GTGTGCCAGGCATAA               CACGCA GGG TGGGTG               AAGCGGTAGCGTAAC  49 57
TspCOW1_11700 1270432 .. 1270482 -  -5.5  -3.16608   ACGGAAAGCACGGAA GTTTGGTTTGTCATCGCCATGACGC TAC GCGCC-CGGCGATGA-AATCGAAGC TTTTGGGTTAAAACC  49 80
TspCOW1_11690 NONE
TspCOW1_11680 1266389 .. 1266407 -  -5.2  -2.78816   TGATGTTGTATTACA             GCATTTCG CGG CGAATCGC             CGTATACACTGCCAT  47 348
TspCOW1_11660 1265531 .. 1265545 -  -3.6  -3.18383   ATCTCCAGCTAGCAA               TATAGT CTG ACTACA               CGAAAGTCTAGTGCC  47 4
TspCOW1_11650 1264760 .. 1264780 - -11.8  -4.08767   CTTAGTGCCGGAAAA            CGACCGCC TCGAC GGCGGCCG            TCTCCGGCTAGGGTC  86 43
TspCOW1_11640 1262703 .. 1262715 -  -2.7   -4.3129   CATGTATCACCAAAA                GATAT ATA ACATC                CCCCATAAGCTACGC  62 85
TspCOW1_11630 1261584 .. 1261616 -  -6.2  -3.01637   GACCAAGAGCAGACA      TTGTCGGTAAAGCC CAGCC GGCTAAACCGACGA      GTTGTTTATGTCAGG  51 53
TspCOW1_11620 1260771 .. 1260794 -  -3.8  -2.87003   CTAGGAAGAATACTA          GGCATATTCT TGAA AGCATTTGCC           CCCCCCCTGGGTCAT  44 218
TspCOW1_11610 1260136 .. 1260150 -  -4.3  -4.41895   AATCTGGAAGGAAAA               GTTCA TCGCC TGAAC               TTGACCTGACAGCCA  68 116
TspCOW1_11590 NONE
TspCOW1_11580 1257071 .. 1257097 -  -2.3  -3.05463   ACCCTCCTCATCGAA        CCGGACATGCAGA TTT CCCGCAT--CCGG        CTCTCGGACAAGACC  41 41
        rhlE 1255412 .. 1255438 -    -2  -3.34715   CACGGGGCGGAAAGA         CTGTTACCGGGC AGC GCCGGGGGACTG         GGACGGGCGATTGCG  46 2
TspCOW1_11560 1254710 .. 1254737 - -14.8  -3.16267   TGCAAGTATATCCAA        CCGGTGGGCGGA TCAA TCCACCCGCCGG         CCGAACCAGAGGACG  83 10
        yaiL 1253864 .. 1253882 -  -5.3  -2.81683   ACAGGCAAAAGCAAG            TCCTGTGC CACG GC-CAGGA             AGAAAAATTAGTTAT  47 255
TspCOW1_11540 NONE
        fliM NONE
        fliN NONE
TspCOW1_11510 NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 1248266 .. 1248277 -  -2.2  -3.48593   CAGTCGTTGACAGAA                GGCT ATGC AACC                 TTCTTACCAATTTGT  47 151
        flhA NONE
        flhF 1244783 .. 1244795 -  -4.7  -2.89881   GATCCATTCTAGACA                CGGCC GCT GGCTG                CGATAGCGCCGAAAC  46 6
        fleN NONE
        fliA 1243167 .. 1243182 -  -6.8  -2.73364   TGGGCATCGCAATGA              CGGGCGC GCT GCGCC-G              TCAACTCTGAACCCA  51 26
        cheY NONE
TspCOW1_11410 1241762 .. 1241772 -  -3.2  -3.04398   CTGGCGGCTCAAAAG                 CCCA GGC TGGA                 GAGCAGTTCATCCAC  43 8
TspCOW1_11400 NONE
       cheB1 1238439 .. 1238497 -  -8.1  -2.52896   GCAGGCCGGAATCCA TCAACCACTGCGGTATCTGGATCCCGGC CTGC GCCGGGATGACGATGGCGCAA-GGTCGA CCCTTGCCTTATACA  53 34
TspCOW1_11380 NONE
TspCOW1_11370 1236696 .. 1236725 - -12.1  -2.70932   CCTGCGCGGGAATGA       CGGCAAGGGTGCC CCGG AGCACCCCTGGCG        TTCATTTTTTTCCGA  70 76
TspCOW1_11360 NONE
        cheW 1235836 .. 1235855 - -10.8  -3.90291   AGCTCTGGAAGGAAA            GAGGTAGT CAAC ACTACCTC             TTGACTGAAGAGCAA  77 196
TspCOW1_11340 NONE
TspCOW1_11330 1235034 .. 1235072 - -11.9  -3.05384   GGTCGGGTTAGCGAA   GCGTAACCCGACA GTGCTGCAGATGA TGTCGGGTTACGC   CCTATCAGGCTAACC  73 122
TspCOW1_11290 1232211 .. 1232226 - -11.8  -3.16564   TCTTTATCTTAGCAA              GCCGCC CAGC GGCGGC               TCAAACCAGCAGCAG  73 26
TspCOW1_11280 1231443 .. 1231464 -  -5.1  -3.65046   CGGGCATGCGAAGAA           TACTGGACC GATC AGTCCCGTA            TGTCAATCGCGGGTA  56 28
TspCOW1_11270 1230811 .. 1230830 -  -7.2  -3.14132   CCGGCCCCTGAGTAA            TATGGACC GTTC AGTCCATA             TTTGGCGAAAATTTT  54 42
TspCOW1_11260 1229712 .. 1229724 -  -6.2  -3.41053   GGAAATCAGCCACAA                CGCC TACGC GGCG                GCGTTCCGGGATCCG  55 363
TspCOW1_11230 1227016 .. 1227032 -  -2.2  -3.64703   CGGTGCGCATGGAAA              GCCG GGTCAGGTA CGGC              AAGGTCATCAGCGAA  51 458
        glgC 1222371 .. 1222383 -  -3.3  -2.63596   CCTTATCTGACATGA                TGCAG CTC CTGCC                CGAGCATGTCGGGCG  40 0
TspCOW1_11180 NONE
TspCOW1_11170 1218981 .. 1219019 -  -7.5  -3.05596   GATGGGTGCAGCGAA  GCGCAACCCATC-GCA TCAGGATC CGCTGATGGGTTGCGG   CGCAGGGCGCCTTCA  54 159
        queA 1214806 .. 1214818 -  -4.1  -3.14848   TCGGCTCATGAAAAT                CTTCG CCA CAAAG                GACACAGGGGCACGA  45 181
         tgt 1213624 .. 1213656 -  -6.1  -3.14132   TGTTGCGGTTATGAA      TCGGCTGCGCCCCCC CAA AGGGGACAAAACCGC      GCGCATTATGCCATA  52 31
        yajC NONE
      secD-1 NONE
        secF NONE
        prmB 1204354 .. 1204364 -  -3.2  -2.73483   ATTTCATGCCAACCA                 CAAG CCG CCTG                 TTGGAATGGTTTTAC  41 99
        hemN 1202437 .. 1202447 -  -3.2  -4.64495   ATGCAACAAAAACAA                 GATG ACC CACC                 GATTCGAGGGAGGCA  69 408
        aroC 1201075 .. 1201085 -  -8.2   -3.1552   GGGGATCCATCAACA                 CGCC CGC GGCG                 GTCTCACTCGCTCCG  57 29
TspCOW1_10990 1200659 .. 1200675 - -11.5   -2.9621   ATTATACCCAAATCA              CCCCCCG TCG CAGGGGG              CCGGAAATCAGGCCT  68 33
TspCOW1_10980 1199295 .. 1199307 - -10.5  -3.67597   CTTGCGAGCGAAGAA                CGCCC GTA GGGCG                GCCCCGAAGGGGTGA  75 152
        leuC 1192192 .. 1192233 - -15.1  -3.47387   GGAAAACACGGACAA TTGCCTGCCGGCGCACGCGC TAC GCGCG-GCGCCGGAGAACAA AACATTTTCCGTGTT  87 101
        leuD 1191420 .. 1191465 -  -5.9  -3.01684   AAGCACGGACAGAGA TTTTGTTCTCCGGCGC-CGCGC ATA GCGCGCGCGCCGGCAGGCAATT GTCCGTGTTTTCCGT  48 57
        leuB 1190193 .. 1190242 -  -9.4  -4.72386   GAAAGCACGGAAAAA TGTTTTTGTTCTCCGGCGC-CGCGC GCA GCGCGTGCGCCGGCAAACAAT--CA TCCGTGTTTTCCGTG  93 64
         asd NONE
TspCOW1_10890 1186436 .. 1186461 - -19.1  -4.17762   GAGGCTGGAAAAGAA         CAAAGCCCGGC GGGT GCCGGGCTTTG          CTATCTACAGTGACC 100 52
TspCOW1_10880 1186046 .. 1186061 - -11.8  -4.72272   TCCCGGCATGAAAAA              CCCGGC CGGG GCCGGG               TTTGGAAATCGGCAA 100 51
TspCOW1_10850 1183973 .. 1183992 -  -7.8   -2.9652   GAAAATGCAACCAGA            GGCTTGAG GGCG CTCATGCC             ATTCATTCCACTCCG  56 28
        truA 1182925 .. 1182949 -  -3.5  -3.53012   CTCGCTGGGGTGAAA          CCCGCAATCCT GTC ACAACTGCAGG          GGAATTGCAGCTTTT  49 158
        trpF NONE
      trpB_1 NONE
        trpA 1180237 .. 1180248 -  -7.2  -2.78384   CCCGGCTTCACGAGA                CGGC AGCA GCCG                 GCTGCGTAGCGTCCA  51 6
        accD 1179200 .. 1179217 -  -2.5  -3.04322   GGCAATCTCGTAACA             CCGCCTC ATCC GTTGCGG              GATTGCCACGTCGCT  41 102
        folC NONE
TspCOW1_10780 1177154 .. 1177167 -  -5.2  -3.40597   CGCCTCAGGCAAATA               CCGG ATTGTG CCGG                GCGGCGGGGCCGCCG  53 82
TspCOW1_10770 NONE
        purF 1175008 .. 1175053 -  -7.6  -2.61216   CGAGGAACGAAGTGA CGTGGCAATCTCCAACCG GTTGATTCTG CTGTACGAGATTGCCACG CTTCGCTCGCAATGA  53 78
        metZ 1173582 .. 1173620 -  -5.3  -3.17392   GATGGGTGAAGCGAA   GCGCAACCCATCACAAT CCGTC ATGACGATGGGTTACGA   CGCTGCGCGCCTCCA  51 47
       ttuD1 1171676 .. 1171690 -  -5.7  -2.94099   GGCGGTGATCAGACA               GGCAT CGGGC ATGCC               GGCATTATATCAACA  48 115
TspCOW1_10720 NONE
TspCOW1_10710 1169745 .. 1169770 -  -4.5  -3.53012   CTCTCCCCCTTCAAA         CGCTCCGGGGA GTGG TCGCCGGCCCG          CTTCGCCCAGGCCAT  52 432
       gltX2 NONE
        cysS 1164808 .. 1164830 -  -4.6  -3.60151   GGGTCTAAATCAGAA           CGGGGGCGGG GAG CGCGCAACCG           GACACTGTCGTGGCA  53 54
TspCOW1_10640 1164223 .. 1164236 -  -3.7  -2.71712   CTGCGCTCCGGAAAG               CCGGG TGGG CGCGG                ACCTGTACAGCGAAG  43 59
TspCOW1_10630 1161714 .. 1161724 -  -6.8  -2.53876   GCGCAGCGTAACCCA                 TCGG TAC CCGA                 CGTGAAGATGAGCGC  50 50
TspCOW1_t00220 NONE
TspCOW1_t00210 NONE
TspCOW1_t00200 1160130 .. 1160140 -  -5.4   -3.5774   AGCTAACGGCCCAAA                 TTCC GCT GGAA                 TTATACCGGCGCGCA  55 106
TspCOW1_t00190 1160001 .. 1160013 -  -7.7  -3.28714   ATATTGATGAGAATA                CGGAA AAT TTCCG                TGCGGGACGACACGC  59 63
TspCOW1_t00180 1159722 .. 1159753 -   -18  -2.52635   ACCTCTATTATCAAC      CTGCCTCCCGGGCCG TAC CGGACCGGG-GGCAG      TGTCTCTCAGATCCC  87 88
         tig NONE
        clpP 1157705 .. 1157715 -  -3.2  -3.40403   TGCCCGGTATGACAA                 GCAA TCC CTGC                 GCCAGTTCAGGGTTT  47 51
        clpX 1156311 .. 1156336 - -19.7  -2.71011   ACTGCGGGTGAATGA         CGCGGCGCCGG AAGC CCGGCACCGCG          CAAGGGTCAGGCGGT 100 42
       lon_2 1153564 .. 1153594 - -17.7  -3.65542   TGCAGGCGCAAAAGA       GAAGCGCGTCGTC AAAAA GACAACGCGCTTC       GTTTTACATTGACTT 100 52
TspCOW1_10570 1152800 .. 1152810 -  -2.4  -3.65425   TGCACACACTTGAAA                 GGGG ATC CCCT                 TCCGGCGCGCGTGCG  51 100
TspCOW1_t00170 NONE
TspCOW1_t00160 1152419 .. 1152438 -   -15  -5.38054   CTGTACAAACAAAAA            GGGCGCCT CGCA AGGCGCCC             TTCGATGTAGTGGCG 100 36
        ppiD NONE
        gltP 1148412 .. 1148426 -    -7  -3.41051   GTATGGCGAGCAGAA               CGCCCC GCT GCGGCG               CAATGTCAGCATCGA  56 389
        hbpA NONE
        oppB NONE
TspCOW1_10510 1142872 .. 1142882 -  -8.2  -4.37886   GCAGGCCGGACAAAA                 GCGC GGA GCGC                 GTTGAACGCCCGCAG  77 206
        dppF 1140734 .. 1140750 -  -2.1  -2.89564   TCCGTAGTGTATATA              CCACCGG CGC CGGGTTG              CGACTATTCCAGCAG  40 29
TspCOW1_10490 1139079 .. 1139104 -  -8.2  -3.69734   AATAATTGACTCAAA         GGCTCGGGAT TCTAGC ACCCCGGGCC          GGGGGAATACACACA  66 47
        agxT 1137796 .. 1137834 -  -6.5   -2.6927   ATGGCTCACAGATCA  CG-CGGCCGCGGATCCCG CCGT CGGCAGCCGGCGCCGGCG   CCTGTAGGCCAGTGC  48 52
TspCOW1_10470 NONE
TspCOW1_10460 1136037 .. 1136056 - -13.6  -3.28712   CGTGGTGGCGCAGAA            GCTCGAGC ACCT GCTCGAGC             GGCTGGAGAAGTAAG  82 43
TspCOW1_10440 NONE
TspCOW1_10430 1134037 .. 1134050 -  -8.1  -3.28712   CGCCGCCGGCGACAA               TGCCC CCTG GGGCA                CGGCGGCCGATAACC  56 428
TspCOW1_10390 NONE
TspCOW1_10380 1132138 .. 1132161 -    -3  -2.70932   GCCGTGCGGGAATCA          CGACGCCGGGA CTG TCCCGGAGA-G          TGCCATGACGCCATG  41 126
TspCOW1_10370 NONE
TspCOW1_10360 NONE
        recQ 1127938 .. 1127950 -  -4.1   -3.1485   GAATGAATGATTGAA                TGACC GGT GATCA                TATTTTCTTATGACG  45 33
TspCOW1_10340 1126933 .. 1126945 -  -5.5  -4.62069   CGGCGAGCGCAAAAA                CGCCA TCA TGGCA                CCCATGGCCGCCGGC  77 414
TspCOW1_10300 NONE
TspCOW1_10290 1123783 .. 1123806 -  -8.8  -3.14132   GTGGCGCTGGAGGAA          GTGC-GCCGCG CTG CGCGGCTGTAC          ACGGCCATGATCTAC  56 124
        pmtA 1119857 .. 1119868 -  -4.4  -3.06696   CGCTTGTTCAACATA                TCGA CTCC TCGA                 CATCGTTTCCTTCCG  47 106
TspCOW1_10240 NONE
TspCOW1_10230 1117256 .. 1117280 -  -4.1  -3.01712   GGCGGTGTTCGAACA          GTTCCGGGCAC TGC GCACCCTGGAC          ACCAACATCTATCTG  44 184
       uvrA2 NONE
TspCOW1_10190 1109330 .. 1109359 -  -2.7  -3.06515   CGCGACGGGTAAAAC       GCAATCCCGATGA TCCG CCACCAGGCCCGC        AGCTCGATAGCGACC  41 107
TspCOW1_10180 1108565 .. 1108586 -  -3.6  -4.25848   AAGCCGTCATGAAAA           CCGCAGGC CCATGT GCCTGCAC            GATTGCCGCAGCCTG  65 61
       katG1 1105336 .. 1105346 -  -2.4  -3.60661   GATTCAAGTATAGAA                 GCGG ATT CCGA                 GGCTTCTACATTCAG  47 91
TspCOW1_10150 1103861 .. 1103871 -  -8.2  -2.53995   ATTCATGTCAACTCA                 GCGG TAT CCGC                 GCCTGCGGCATGGTC  53 39
TspCOW1_10140 NONE
TspCOW1_10130 1102217 .. 1102239 -  -6.2  -3.91144   CTGACACGGGACAAA           CGGCGATTTC AGG GATATCTCCG           TCACCGCCGAAGGCT  64 62
TspCOW1_10120 1099878 .. 1099895 -  -5.5  -3.63627   CCGGCAGACGCCAAA             GGCCTGAG CGT CCC-GGCC             ATGCCGGTGGGCAGC  57 242
TspCOW1_10080 NONE
TspCOW1_10070 NONE
TspCOW1_10060 NONE
TspCOW1_10050 1094472 .. 1094501 -  -7.7  -2.95774   CAGAGGCATCAGACA       CCTGGATGCCGGC CTTC GCCGGCATGACGG        ATTGATCAGAGCTTC  56 75
TspCOW1_10040 1093655 .. 1093677 -  -6.2  -2.70932   CCGTCTGCGCAATGA           TGGGTTACGC CTT GCTTCACCCA           TCCTACGTTACTCCG  49 41
TspCOW1_10030 1092718 .. 1092749 -  -5.2  -2.57132   TCCGCTGTCGATAAC      TC-CATGCCGATC AGATGGG GATCGGCCTGTGA      TTTTCAAGATCCCTT  46 29
       trx_2 1092199 .. 1092240 -  -5.8  -3.90112   CGTTTCGGAATGAAA CCCGGCGATCGGACCGGTCC GGCG GGACAGAACCGACCG--GGG CAGCGATCAGCTTTC  61 39
TspCOW1_10010 1088682 .. 1088714 -  -5.6  -3.53444   GTATTTGCTTTCAAA     CGCCTGC-TCCCA GGAACGGT CGGGACACAGGCG      CATATTACAGAATTA  55 76
TspCOW1_10000 1086964 .. 1086982 - -10.2  -3.53091   ACGTGCGGTGGGAAA             GGAGGCCG ACA CGGCCTGC             TTCCAGTGCCACACC  67 137
TspCOW1_09980 1085781 .. 1085804 -  -4.4  -4.08485   CTGACTTAAACCAAA          CAGCCTCCGCG AAA CCCGG-GGCGG          TTCATCACTCCTGTA  62 74
TspCOW1_09910 1078485 .. 1078506 - -17.3  -5.27335   TCCGGCAAACAAAAA           GGCGCCACC TCAG GGTGGCGCC            TTTTTCATGGTCGAT 100 68
TspCOW1_09890 1073410 .. 1073434 -  -4.2  -3.95219   CCCAAAGGGCATAAA          CGCAGCGTGG CAATC CCACACCACA          GTATCAGCCGGCAGG  60 190
TspCOW1_09870 1071112 .. 1071122 -  -5.4  -3.27406   TCCTTATCAGAAAAC                 GATG ATG CATC                 CCGCCTGCTTCACTT  51 120
TspCOW1_09860 1069959 .. 1069973 -  -9.2  -3.53012   TTGGTTCCTGGGAAA               CCGCCG CAC CGGCGA               TCAGCCCCGCACAGA  69 432
TspCOW1_09850 1067608 .. 1067648 - -24.7  -3.76125   TTACTCGAATTGAAA  CCGGTCAGTCCGGCCACCG GAG CGGCGGCCGGGATGACCGG  CCGCGTTTCACCGGG 100 33
        sbcB 1065582 .. 1065601 -  -6.4  -4.62336   ATGTGATCCGAAAAA            CGCTGCAGC GAC GCTGC-GCA            CGTGCCGTGGAACCA  78 315
TspCOW1_09830 1064482 .. 1064493 -  -2.2  -3.49086   ACACAATGACCACAA                CCGT CACA ACGA                 GTCATATATACAAAA  47 76
TspCOW1_09820 NONE
TspCOW1_09810 1062107 .. 1062141 - -17.3  -4.07568   GGTCCGGCCGGAAAA     CCGAGGGATCTCTAC CGTTC GTAGAGATCCCTCGC     ATTACATCCCTGTCG 100 50
TspCOW1_09800 1061635 .. 1061646 -  -2.2   -3.3676   GGTAACATTCTAGAA                GATG GAGG CACC                 GAAAATTCTGACTTC  46 8
TspCOW1_09790 1060976 .. 1061015 - -18.5  -3.53761   GAAGCGCCCCTGAAA  CGAAGCGCCGCGCGCCC CCTTAC GGGCGCGCGGCCACTCG   TTCTTTCACTTCCTC 100 87
TspCOW1_09760 NONE
TspCOW1_09750 NONE
TspCOW1_09740 1056972 .. 1057000 -  -8.8  -3.25192   CTCAAGGGTATAACA       CCGTCATCCCGGC GCAG GCCGGGACC-CGG        AAACCGCCGCGGCCC  63 216
         fur 1055824 .. 1055834 -  -2.4    -5.011   AGGGAAAGAAGAAAA                 CGGC GCA GCGG                 AAATAACAATCCTCG  74 140
        hrcA 1051802 .. 1051819 -  -3.3   -4.1196   AAGGGAGGGGCAAAA             TGCCTCGC TGC GCG-GGCT             TTGCGTCCTATTTGG  60 44
TspCOW1_09680 NONE
        dnaK 1048952 .. 1048998 -   -13  -4.50993   GGAAACAAACACAAA CGGGACCGGTGAGCCGACAC AACCAAG GTCTCGACTCTCCAGTCCCA TTACCCCTTAACCCG 100 45
        dnaJ 1047547 .. 1047567 -  -6.8  -2.61274   GTCAGGCGAAGCAAT           CTCGCGACG CTAC CGCCGCG-G            TTGATTTCAGAGATT  50 67
        dapB 1046362 .. 1046387 - -11.9  -3.70902   GCGTGGATATGGAAA         GCGGGAGCACTC CCC GAGC-CTCCCGC         TGGCAATCATTTCGT  81 275
        carA 1045099 .. 1045114 -  -2.6  -2.52896   GCAGGCGGGAATCCA              TATACCG CCG CGGT-TA              CTGGATCCCCGCCTG  38 96
        carB NONE
        greA NONE
TspCOW1_09610 1040594 .. 1040626 -  -9.1  -3.64703   GGGGGCTGACCGAAA      GCGTGATCGAGGA GATCGAT TCCTCGGTCGCGC      ACCACGAGCTGATGA  68 200
        rlmE 1039675 .. 1039692 -  -4.7  -4.07568   TGGGCCCGCGCAAAA             CCCCGGC AGCC ACCCGGG              TTAATCGGGCCATAA  62 60
        hflB 1037662 .. 1037681 - -16.4  -4.21922   GCAGTTAAAATGAAA            CGCCCCGC CAAA GCGGGGCG             TGATGCGGGTGGCAG 100 46
        folP NONE
        glmM 1035199 .. 1035217 -    -3  -2.53918   TTACCTGACAAAACG             GGGCGCTA GCT TAGCGACA             GACCGGGAGAAAATC  39 110
        tpiA NONE
        secG NONE
TspCOW1_t00150 1033816 .. 1033841 - -12.5  -2.52543   ACGGCCCGCAACGCA         GCAGGCCCCGC ATAA ACGGGGCCTGT          CACGATTCATCAACA  71 50
        nuoA NONE
       nuoB1 NONE
        nuoC 1031762 .. 1031779 -  -4.2  -3.89346   TTGCTACCGCAGAAA             CAACAT TTACAT ATGTTG              TTTCTTGGCGCACCT  57 101
        nuoD NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
        nuoH 1024922 .. 1024937 -  -3.2  -3.28416   CACCATTCATATCAA              TCGAAC CAGG GCCCGA               CGCCGGCGACGATCG  45 6
        nuoI NONE
        nuoJ 1023697 .. 1023707 -  -2.4  -3.34398   CCCCCGCCTCAAACA                 GGGC CAG GTCC                 ATCCGTACACGCCGC  46 60
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 1018145 .. 1018158 -  -4.5  -3.60805   AGATTGTACCGGAAA               CCGGCG GCC CGC-GG               CAGACCCTGTCAGCC  53 35
TspCOW1_09390 1017735 .. 1017750 -  -3.2   -2.7386   AACGCATTCTAATGA              CAAGGC CGAT GCTTTG               CAAGCCCGCCGCAGA  41 41
TspCOW1_t00140 1017582 .. 1017594 -  -6.2  -3.11316   CGAGGACTGAACAGA                CGGC TGCCG GCCG                CAGCTGTGCGGCGGA  52 66
TspCOW1_09360 1013583 .. 1013602 - -10.6  -3.28712   CGGCGTGGGCGAGAA            CGCCGCGC CGGT GCGCGCCG             GCATCCTGGATGGAC  66 437
TspCOW1_09320 1008301 .. 1008320 - -12.1  -5.27335   CTCGGGAAACAAAAA            CCCCCGC ATCAGG GCGGGGG             TTTTGAGACAGCCGG 100 50
TspCOW1_09310 NONE
TspCOW1_09300 1002559 .. 1002573 -  -7.8  -2.64218   ATTCTGGACGACAAT               GGCTGA TAT CCAGCC               GGGGGGCAGCGGTCA  53 220
TspCOW1_09220 NONE
TspCOW1_09210 NONE
TspCOW1_09200  993853 ..  993871 -  -5.8  -3.01712   CGCTGGCGGTCAATA             TCGCCGTC CAG GTCGGCGC             CGATCCGGCCATCTA  48 343
TspCOW1_t00130  992726 ..  992742 -  -3.5  -3.63515   GCTCACCTCCAACAA              GGGCCTG CCG CCGGACC              AGCAGATGGAGACCT  54 347
TspCOW1_09170 NONE
TspCOW1_09160  986876 ..  986897 - -17.3  -5.24129   TCCCGTGATAAAAAA           CGGCCCGTC ATTC GACGGGCCG            TTTTTTTGTGGAGCG 100 140
        rimP  985184 ..  985206 -  -4.8   -5.0538   CCCGAGTCGAAAAAA           TTACCCCTGA AAT TCAGGGACCA           ATCGTGCCTGCTCGA  83 3
        nusA  983612 ..  983624 - -10.5  -2.99649   AGAGGGGGACAGAGA                GCGCG CTG CGCGC                GGTTCTATTGCCTGG  64 41
        infB  980963 ..  980981 -    -8  -3.32343   GGCATAGGCGTACAA             CGGGCACC GGC GGCGGCCG             CGGACGGATCAGACC  59 34
        rbfA NONE
        truB  979422 ..  979471 -  -6.6  -3.08133   TACGGATGTATCGAA GCCGCGTATTGTAACTT-C-CCCCC AGA GGGGCCACAAGTTCCAAT-CGCGGC AGAAACTTAGCCCAC  52 54
        rpsO NONE
         pnp  976819 ..  976836 - -10.5  -5.03994   GTTCACACAGAAAAA             GGGGACC TGAA GGCCCCC              TTTCCTGAGACAGCG 100 156
TspCOW1_09070  976119 ..  976140 - -14.5  -4.27316   GCGGGGAACCGAAAA           TGCGGCTGA TCGC TCAGCCGCA            TTTATTATTGCTGCG 100 49
TspCOW1_09030  970784 ..  970816 - -14.2  -2.93447   GGAATCCTGACAAAG     CCGGCG-CCGGATCA GATC TGATCCGGGCGTCGG      ACCGGCAGCCCACCG  82 42
TspCOW1_09000 NONE
TspCOW1_08990  966438 ..  966455 -  -4.1  -3.59262   GGCGAGAGTTGGAAA             CAGTTGC TGAA GGAACTG              CCGGCCACCCTGCTG  51 471
         smc NONE
TspCOW1_08940 NONE
        ligA  957811 ..  957834 -  -3.1  -3.16564   TCCGCACGGCACGAA          CCGC-CGC TGCCCCTTC GCGTGCGG          AGATGCGCAGGCGCG  43 47
TspCOW1_08920  955258 ..  955272 -  -3.5  -3.14132   TTTCTCTTCCATTAA               CGGCT CCGTC AGCCA               GATTTCATCGATTGG  43 30
TspCOW1_08910  954900 ..  954919 -  -7.8  -3.05521   AGCATAGCGCGAACA            TGCCTGCG CACG CGCATGCA             TTTCAGAGTTCGTCC  57 28
TspCOW1_08900  953923 ..  953962 -   -15  -3.30039   CATGTACAAGTAAGA  CGAACCGCCGCCCTGC CGACCTGC GCAGGGCGGCGCCTCA   TTCCGGGAGCGAGAC  87 23
TspCOW1_08860 NONE
TspCOW1_08850  948235 ..  948275 -  -7.3  -2.62184   TGTCCGGTCAGAGCA  CGCCACTGCGCCTCGCGGG CGC CCCGGATGGTGAAGTGGCT  GTGCCGGAAAAGATT  50 94
TspCOW1_08840 NONE
TspCOW1_08830  947143 ..  947167 -  -4.2  -3.32803   ATCACATTAAATAGA          GCCCCGTCAT GAGCA ACGACCGAGC          GTTCGTACGATTTTT  49 134
TspCOW1_08820  946385 ..  946398 -  -3.9  -2.89683   ATTGCACGCCATATA               TTTCT AACA AGAAA                GCTCATACTCTTTGC  44 61
TspCOW1_08810 NONE
TspCOW1_08800  942191 ..  942220 -  -4.7  -3.78934   GCTGCGCGACAACAA       GCTGGCCGCGCTG AATG CCGGGCGGCCCGA        GCTCATCGCCACCGC  58 261
TspCOW1_08780  940151 ..  940193 -  -6.9  -3.29511   CGGACTGCGGCACAA GCTG-CCGCCGGCACAGGCCG TGC CCGCCTG-GCCGACCGTCACC CATTCGCGCCGCATG  56 292
         tpm  936204 ..  936260 -  -9.3   -2.6927   ATGTTTTACAGACTA TTCGACCCTTTC-CAGCAGCGGCCGG ATCCAG CCGGCCGTCGCTGCGGACGGGACTAA TGCCTATAACGGCCG  60 112
TspCOW1_08730 NONE
TspCOW1_08720 NONE
        mrcB NONE
TspCOW1_08700  929870 ..  929883 -  -5.3  -3.47573   CGAGGGAGAGCAGAA               GAATG TGGG CATTC                TACAACGTTGACAGC  53 44
TspCOW1_08690  929039 ..  929078 - -10.3  -3.67597   CTGGTGAGTCAACAA GTA-G-GTCGGATTA-GCCC GCA GGGCGTAATCCGACTCGTAC CGGGCTGTGTCGGGT  75 130
        yoaA NONE
TspCOW1_08670  926350 ..  926367 -  -4.1  -2.51951   TGAATCATTAAAATC             TCAACGC AAAG GCGTTTA              TTACTTCGATTCCAG  41 26
TspCOW1_08660 NONE
TspCOW1_08650  925347 ..  925389 -  -9.8  -3.01712   CGCCCTGCTGGAACA GGCCGGCTACGACGAGGCC TTCGTC GACCGCGTCA-AGCAGGCC GTGGGCAAGAAGGCG  60 290
TspCOW1_08610 NONE
TspCOW1_08600  920572 ..  920587 -  -6.2  -2.73441   CATGACGCTGCAAAG              CTTGAT TTGA ATCAAG               ATTGGGTCGGTATTG  49 86
         sqr  919116 ..  919147 -   -11  -4.39287   CCAATGACAGCAAAA      GTCACGTTCGGA TACAATCC TCCGAACATGAC       ATGTTATGACACTCA  90 75
TspCOW1_08580  917576 ..  917592 - -11.5  -3.37612   GGCAAGGCCAAGTAA              CCCCGGC GTT GCCGGAG              TTCCTCACGGAGCGG  73 147
        bioA  913887 ..  913905 -  -2.4  -3.03124   TCTCATGCGGCAATA             GCAACC GATTGGA GATTGC             CACGTCACTTCGTTC  41 133
TspCOW1_08500  910422 ..  910437 -  -5.4  -3.72893   CATGCGCGGATTAAA              CCACAC TTCC GTGTGA               TTGCGAATCGCGCGG  58 88
        lolC NONE
        lolD  908132 ..  908150 -  -2.2  -2.52635   ATCTTCACCACCAAT             CCGCTGAC CAT GCCGCCGG             TATTCTATTCCACCT  37 349
        comA  905326 ..  905343 -  -4.1  -3.53761   CAAGGTTTCCGTAAA             CCCGT CGTATGAT ACGGG              TTCGGGCCTGCTCAT  51 152
TspCOW1_08450 NONE
TspCOW1_08440 NONE
        msbA NONE
        lpxK NONE
TspCOW1_08410 NONE
        kdsB  900261 ..  900288 -  -5.4  -2.87132   CTCCTGTCGGAGATA        CTGGATCCCCGC CTGC GCGGGGATGACG         GCGTTTTTGGTGTTG  48 119
TspCOW1_08390 NONE
TspCOW1_08380 NONE
TspCOW1_08370  898225 ..  898280 - -19.4  -3.14931   GTCAGGTCTTACTAA CGGGGTCAGGTCTTGCAAT-CAAGCA TTCGCG TG-TTGCAATGCAAGACCTGACCCCG CCACGTTTGATTTCA 100 244
TspCOW1_08360  897088 ..  897143 -  -4.2  -3.62775   ATTACCCGTTAACAA CGGGGTGAGGTCTTGCAAT-CAAGCA TTCGCG TG-TTGCAATACAAGACCTGACCCTG CTACGTGAAAAGGGT  51 179
TspCOW1_08350  896580 ..  896590 -  -8.2  -3.25942   ATTCCGGGATATGAA                 GGGC GCT GCCC                 CATTATTCACTTAGA  59 32
TspCOW1_08340  895537 ..  895549 -  -6.3  -2.72344   CTGCAGTTGGAAGTA                TTTGC TAT GCAAA                CTTCACATCCGGTCG  49 52
TspCOW1_08330  895008 ..  895053 - -14.1  -2.61216   CGAGGAACGAAGTGA CGCGGCAATCTCCAAACAGCTG AGT CTGCCGTGTG-AGATTGCCACG CTCCGTTTATGCCCT  78 83
        ptpA  893880 ..  893914 - -12.8  -2.66316   CCCGGTATGACACGA     TGATGGGTTACGGCGC CAC GCGCCTTCACCCATCC     TACAGCTTGTGCTCG  71 151
        rluC  889759 ..  889777 -  -4.4  -2.97951   GATCGCATGACAAAT             GCGCGTCA GGC TGTCCCGC             GGTTCCCGTCGGGGC  46 12
TspCOW1_08280 NONE
TspCOW1_08270  887732 ..  887742 -  -6.8  -3.78775   GCCGGGATGACGAAA                 GGGA AAT TCCC                 AGCCTTCGGCGCCTT  63 204
TspCOW1_08210 NONE
        rpmF  880517 ..  880559 - -14.8  -3.85698   GCCCGGGTGCAGAAA CGCGCGCGGCGCGCGAGCCG ACCGG CTGC-CGCGCGCCGCG-GGG TCGGGCCGATCGGTT 100 41
        plsX NONE
        fabH  878483 ..  878499 -  -2.9   -4.3208   GTTCACAATTCAAAA              TTTCAGC AGC GCCGAAC              CCCAGGTGAAGCCGC  64 3
        fabD NONE
        fabG  876327 ..  876372 -  -2.6   -4.1899   GTATTGTAGTGAAAA GCCTG-GGGCTAATCCAG-CGGA AAT CCCGTCTGAAC-AGCCCGCGGAC CCTCGCCGCAGCGCC  59 104
        acpP  875985 ..  876012 - -12.6  -4.49756   TCGCAAATACTAAAA        GGCCGCAGCCAC CAGG GTGGCAGCGGCG         CTGAATTGCAGCCTG 100 46
       fabF1 NONE
        trpE NONE
        pabC NONE
TspCOW1_08110 NONE
TspCOW1_08100 NONE
      gltA_1 NONE
TspCOW1_08080  868803 ..  868818 -  -3.2  -3.06696   TTTGGGGTCAAGACA              CCGGAT GCGA ATCCGT               CAAATATACTCCGAA  43 137
TspCOW1_08070  868415 ..  868431 - -10.8  -5.06052   TTAAAAAATACAAAA              CCGGGC ACGAG GCCCGG              TTCCGGATCCGTAAG 100 55
        rluE NONE
         tmk NONE
        holB NONE
        pilZ  865363 ..  865375 - -10.5  -3.32844   CTTGTGAGCGCAGAA                CGCCC GCA GGGCG                GCCCCGAAGGGGTGA  69 143
TspCOW1_08020 NONE
TspCOW1_08010  863421 ..  863444 -  -9.4  -2.57468   CCCCAGGACACCAAT          GCCGCCGGCG ACAT CTTCGGCGGC           TGGATCATGGCCCAG  54 459
TspCOW1_07930  852526 ..  852554 -  -7.3  -4.07568   CCGCTGGGCGGAAAA        TCAGCCCCAGCCC TGC GGGTTGCGCCTGA        AAAAGCGCCACTCGT  68 143
TspCOW1_07920  850961 ..  850977 -  -9.3  -3.53563   AGACCGGTGGCGAAA              CGGTCCG GCA CGGGCCG              ATTCAGCATGGACGC  69 144
TspCOW1_07910 NONE
TspCOW1_07900  848301 ..  848321 -  -3.9  -3.16564   TGCTCAGTGCATGAA            GTACCGGAC CGC ATCAGGCAC            CGCCCCGCAGTGGCA  45 18
        nhaD  846762 ..  846780 -  -7.4  -3.96148   TTTTTTCATCACAAA             TGTGGGCA TAT TGCCCAAA             AGGGGTTTACTGATG  68 106
TspCOW1_07810 NONE
TspCOW1_07800  840635 ..  840660 - -20.5  -5.76633   CCACAGACAAAAAAA         TCGGGCCGGCA GTTC TGCCGGCCCGA          TGCCGAGTCCTCTCT 100 98
TspCOW1_07790 NONE
        rimK NONE
TspCOW1_07770 NONE
TspCOW1_07760 NONE
TspCOW1_07750  836334 ..  836349 - -11.8  -4.00532   GCCTGAAAGACGAAA              GCCGCC TCCG GGCGGC               TTTTTTATTTATGTG  86 176
TspCOW1_07720  832336 ..  832349 -  -3.7  -2.64803   CGATGCCGAAACCGA               CCGCC TGCT GGGGG                CGCACATGATCGGTC  40 314
TspCOW1_07680 NONE
TspCOW1_07670  825463 ..  825482 - -11.4  -3.21747   CCATTGCAGCATCAA            CCGGG-CCG AGC CGGACCCGG            ATTTCGCCGAATCCA  68 270
TspCOW1_07650  824519 ..  824545 -   -10  -3.16742   TCCAACTCGCAGGAA         GACGCCCGCAGC GCG GCATCGGGCATC         CCCGGTGCTACCTGC  66 180
        nadA  823223 ..  823246 -    -8  -2.52464   TGGCCCGGCAACGGA          CGCCCGACGG CGGT CTGTCGGGCC           AGACCGGGGTATCTG  53 208
TspCOW1_07630  822557 ..  822587 -  -7.4  -4.08216   GCAGGCCTCGGAAAA       GCTGGCCGAGGCCT ACA AGGTACTGGCCAGC       CAGCCCGGCTCGATC  69 166
TspCOW1_07590  818467 ..  818483 - -10.8  -3.40371   GATCCGATGAACGAA              CCCGCC GGTGA GGCGGG              TTTTTTTCGCAAAGG  69 61
TspCOW1_07530 NONE
TspCOW1_07520 NONE
TspCOW1_07510  810345 ..  810379 -    -5  -2.82635   AGTGCCAGCAGCAGA    GCAG-GGCAGGGATG GAGACG CATGCCTGTCACTGC     AGGTTGAAGTTCACG  44 19
TspCOW1_07500 NONE
TspCOW1_07490  808717 ..  808727 -  -4.6  -3.66018   GGACGATGTGAACAA                 GACC TTC GGCC                 AGCAGACCATCGGCA  55 347
TspCOW1_07450 NONE
TspCOW1_07440 NONE
TspCOW1_07430 NONE
TspCOW1_07420 NONE
TspCOW1_07410 NONE
TspCOW1_07400 NONE
TspCOW1_07390  801164 ..  801174 -  -4.6  -3.32963   ACCCGCATTGCAGAA                 CCCC AGG GGGA                 CCCGTAACATTCTGA  51 53
TspCOW1_07380 NONE
TspCOW1_07370 NONE
TspCOW1_07360 NONE
TspCOW1_07350  796337 ..  796352 -  -5.4  -3.01712   CCGGGCGGTTCAACA              CCGT-CC ATA GGCACGG              CCGCACGTTTTTCCC  48 182
TspCOW1_07340  795731 ..  795748 - -14.1  -5.24129   TGCGGGCACAAAAAA             GCCCCGC CGGG GCGGGGC              AAGTGCAGGGTGAAA 100 52
TspCOW1_07330  794216 ..  794241 - -19.1  -5.40072   TCTCTCCCAAAAAAA         CAGGCCACGGT GGAG ACCGTGGCCTG          GACGTGCTTCAGCCG 100 56
TspCOW1_07320  793912 ..  793953 -  -7.2  -3.41126   CCAGAAACGCGACAA CGATGAGGCCTTGACCCGC TGGGC GCGGCACACGGCCT-ACCG CTGGCTGAAGAACAG  56 77
TspCOW1_07280  791145 ..  791181 - -20.3  -5.71983   CGAACCATAAAAAAA    CCCACGATCACTGCC GGGTGGA GGCAGTGATCGCGGG    TCTCGGGTCGGGCTG 100 50
TspCOW1_07260  789016 ..  789030 -  -2.8  -3.03441   CATGAGGCTGCAATA               TCAAAC TGA GTTTGG               TTACTCTGAATGAAA  43 186
TspCOW1_07250  788330 ..  788354 - -12.2  -3.88498   TGCCCAGAGAGGAAA         CGGCCTGAGGC TGAT GCCTCAGGC-G          CTGCGGCGGCGGGCA  83 19
TspCOW1_07230 NONE
TspCOW1_07220 NONE
TspCOW1_07210 NONE
TspCOW1_07200  784330 ..  784358 -  -4.4   -2.9834   AGCACTACAACGATA        CCCACGGCCACC TGGCG GGCGACTGTGCG        CTGCAAGCCGTGGCC  45 353
TspCOW1_07160  782129 ..  782145 -  -7.9  -5.26316   GCACTGCAGAAAAAA              GCCTCAC CTG GTGGGGC              TTTTTTTATGTCCGG  93 63
    dsrA-2_1  777524 ..  777570 -  -4.1  -3.80094   CTTAAATTAATACAA CTCGGTTTTGATCCGGGGGCG GGATG CGCCCCCGGTCCATTGCAGAC TGGAGACCTGCTCAG  57 37
    dsrB-1_1  776352 ..  776384 - -18.5  -2.84602   GTCAGCTGATTAAAG      TGGTGCGGTTAGCGC CGT GCACTAACCGCACCC      TGACCGACTGGCACA 100 59
        dsrE NONE
TspCOW1_07070  775471 ..  775481 -  -3.2  -2.72152   TTGATTAGAAACTGA                 GAAC GAC GTCC                 TGCTCATCCATCAGG  41 4
        dsrH NONE
TspCOW1_07050  774671 ..  774681 -  -6.8   -3.9534   AGCGATACTCACAAA                 CGAC ACC GTCG                 TCTCCTCACTGTTGC  68 101
TspCOW1_07040 NONE
TspCOW1_07030 NONE
TspCOW1_07020 NONE
TspCOW1_07010 NONE
TspCOW1_07000 NONE
TspCOW1_06990  767680 ..  767721 - -20.9  -3.92869   GCATGGATTCAGAAA CACGGAACGCGCGCAACCG GCGA CGGCTGCGCGCGTTCTGTC  AGCATGGAGGTGGAG 100 50
        cbiA  766256 ..  766269 -  -3.7  -2.79796   GGCTATTTTATGACA               GCTGC CGGG GCGGC                GTCGCCATCACCTGT  43 42
TspCOW1_06970 NONE
TspCOW1_06960 NONE
        narL NONE
TspCOW1_06940 NONE
TspCOW1_06930 NONE
         ndh  759253 ..  759277 -  -5.5  -3.16742   GGTAAGCGGTATCAA          CGCGGGTACGG AGG CCGTGCACGAG          TCGCTGGCGATCCGT  49 277
TspCOW1_06850 NONE
TspCOW1_06840  750280 ..  750293 -  -2.3  -2.52464   CCGCTTCCTAATTGA               CGGTA TGGG TGCCG                GCCTGTTCGGTGGCC  38 4
TspCOW1_06830 NONE
TspCOW1_06820  748404 ..  748421 -  -5.5  -3.30124   GGCGATCCTGGAGAA             CCATCAG CAGG CCGACGG              CAGCGTCACTGTGCC  51 145
        trxB  738894 ..  738910 - -11.5  -5.02074   CGAGGGTGCAAAAAA              GCCCACC AAT GGCGGGC              TTTAATAACCGGCTG 100 240
TspCOW1_06720 NONE
         aat  736949 ..  736959 -  -4.6  -3.06796   CTGCAGGTTAGGCAA                 CCCC CTC AGGG                 CTGTCAAACCGCCAG  47 7
         ate  736089 ..  736101 -  -4.1  -3.58242   AAACACGGACAAACA                GGATT CAA AACCC                GCTCTCCTGACCACT  51 107
        infA  735664 ..  735688 - -17.1  -2.77523   GCCGCACGAACATCA          CCGCCCGACCG TCC CGGTTGGGCGG          TTTTTTTATGGGCTG  87 75
TspCOW1_06660  732250 ..  732280 -  -7.4  -2.52676   CACTGTTCGAAGCCA       CGCACGGCACCGCC CCC GACATTGCCGGGCA       GGACCGGGCCAATCC  49 248
TspCOW1_06630 NONE
        mnmA NONE
        hflD  726960 ..  726980 -    -4  -4.72986   GACCGGGATGAAAAA           CCGTC-GTG CCTT CACCGACGA            GGCCCGGCCCGTCTG  77 476
TspCOW1_06590  722640 ..  722655 -  -4.7  -3.53012   GCCCCCGCGTTTAAA              GGGTT TATCTC AACCC               GCCAGCTGGCGCAGC  53 19
TspCOW1_06580  720983 ..  721031 -  -3.3  -4.74801   GAACGGCAGGAAAAA CGGGCGATTGTAGGTCGGGTTA-GC GCA GCGTAACCCGAC--ACG-TCGCCGG AGGGATGTCGGGTTA  73 62
TspCOW1_06570 NONE
TspCOW1_06560  719931 ..  719943 -  -5.5   -3.5891   CCGCACAATTAAAGA                TGCAG CCG CCGCA                GTTCCGGATCAGCGC  55 6
TspCOW1_06530  716565 ..  716579 -  -4.9  -2.95388   GATTGAATCTATATA               CCACG GAGTG CGCGG               GGTGGCAATTTGCGC  46 54
TspCOW1_06520  715821 ..  715832 -  -7.2  -3.60098   ACGCCGGACCGGAAA                CCGG AGGA CCGG                 CCTGAGTAATTGCCA  60 100
TspCOW1_06470  710161 ..  710181 -  -3.8  -3.28712   GGTCCCGGGCGACAA            GGCGCTGG TCGAT CCGGCGGC            CTGGGAGGCGATGCG  47 286
TspCOW1_06450  707470 ..  707488 -  -6.6  -3.15999   CCGCGACAGACCGAA             GGCCCTTG CGG CGAAGGCC             ACCCACCGACCCGGC  52 141
TspCOW1_06440  705721 ..  705764 -  -6.7  -4.07687   ACGCTGCTTCCAAAA GGC-TGGACCCACGCC-CG ATAAGAGG CATGGCGCGGGTCCTTGCC GGCGATCCGGCGACA  67 220
TspCOW1_06410  702709 ..  702721 -  -3.3  -3.28712   GGTGGGGGTTGATAA                CCAGC CGG ACCGG                GATAGTCAGTCCTCC  45 31
TspCOW1_06400  701752 ..  701762 -  -3.2  -3.03441   GACCAGCCCTCAATA                 GCAG ACT CTAC                 TCCCCCTCCAGAACA  43 22
TspCOW1_06390 NONE
TspCOW1_06380 NONE
TspCOW1_06370 NONE
TspCOW1_06360 NONE
TspCOW1_06350 NONE
TspCOW1_06340 NONE
TspCOW1_06330 NONE
TspCOW1_06320 NONE
TspCOW1_06310 NONE
TspCOW1_06300  693278 ..  693289 -  -2.2  -3.92522   GCGTAACCCGACAAA                TCGC GGCT GCAA                 CCTGTTGGGTTACGG  53 77
TspCOW1_06280  691779 ..  691789 -  -8.2  -4.02736   AAGGCACAGGACAAA                 CCCG AGG CGGG                 GTACATCGCCTTCAG  70 377
TspCOW1_06180  679083 ..  679119 -  -2.4  -4.15864   CAGAAGAAGCAGAAA   TGTA-GGTCGGGTTA-GC GCA GCGTAACCCTACAATACA   GCGCGAATCCTGTCG  59 103
TspCOW1_06120  674327 ..  674359 -  -4.8  -3.17075   CGGGCGGGAATGGAA     CTCGATCGCCGCGCCC TGC GGGTGCGG-G-TGGAG     GGTTTGCAGGTGACG  47 246
TspCOW1_06100  672186 ..  672202 -  -4.3  -3.36273   GCTGCGCAATATCAA              CCCCGAC TAT ATCCGGG              CGCTCATGATGCACG  51 414
TspCOW1_06080  670799 ..  670815 -  -2.2  -2.66316   CGGTGTATGATACGA              GCCTCA TCCGT TGATGC              ATGTTCCTGAGCCAG  38 79
TspCOW1_06070  669884 ..  669900 -  -2.1  -3.96148   GCCTCGGAGGAGAAA              TGGGGCG TGC CGGCGCA              TATCCTGATGGCCTT  56 499
         map NONE
        glnD  627395 ..  627407 -  -3.3   -3.0693   GTGTAAATGAAAGCA                GGTTC TAG GTACC                AGACGCCGGGTCCTG  43 17
TspCOW1_05710  626924 ..  626949 - -19.1  -3.01791   AGCCGCGCCGGAACA         CGACAGGCACC GCAG GGTGCCTGTCG          CCGAGGTCCGGTCGG 100 52
TspCOW1_05700 NONE
TspCOW1_05670 NONE
        dapD  622880 ..  622908 -    -6  -2.53382   ACCAGGTCCAAGGTA       GGTCGGGTCA-GC CGCA GCGTAACCCGACA        CAGGGCCGGATGGCG  48 118
TspCOW1_05650 NONE
TspCOW1_05640 NONE
TspCOW1_05630 NONE
TspCOW1_05620 NONE
TspCOW1_05610 NONE
TspCOW1_05600  617029 ..  617043 -  -2.1   -3.7282   GGATCTGATCAAGAA               CGATA AGCTG CATCG               CGACATCAGCATCGA  51 87
TspCOW1_05480 NONE
        dapE NONE
TspCOW1_05460  601921 ..  601940 -  -7.1  -3.19157   CATGAACTTCATCAA            TACGCCG TCATCC CGGCGCA             GGCCGGGATCCAGTG  56 191
TspCOW1_05450 NONE
TspCOW1_05440 NONE
TspCOW1_05430  599037 ..  599075 -  -5.4  -3.04398   CTTGTGCGTGAAAAT CGTAGGTCGGGTTA-GCCC GGCA GGGCGTAACCCGACG--CG  GCTCGCCGCAGCGTT  49 84
TspCOW1_05420  598267 ..  598292 -  -3.1  -3.52073   GGCGGAAGAGGAGAA         GCGCATCCG CGAACAGC CGGTGGCGC          GGACCACGGAGATTC  49 272
TspCOW1_05400 NONE
        cmoA NONE
        cmoB  594673 ..  594690 - -11.3  -2.52543   ATCGCGGTCAATGGA             TTCCCGC CTTC GCGGGAA              TGACGGGAAGGACAA  65 101
         mfd  590870 ..  590884 -  -2.8  -4.24075   ACGCAGTAACATAAA               TAAGCC TCT GGTTTA               ATCGTCATTGCGAGG  60 141
TspCOW1_05360  589842 ..  589873 -  -5.6  -3.01745   TGCGCAACAAGTACA      GGGTCAGGCGACGC AGGG GCGGGGCCTTTCCC       CCCTCGCACCTCTAC  47 275
TspCOW1_05070  564490 ..  564511 -  -6.6   -3.0634   AACTGGAGGCGAAGA           TCC-GCCAG AGCGG CTGGCTGGA           GTAGGGTGATCCCTG  52 157
TspCOW1_05010  555066 ..  555092 - -11.6  -3.06501   CAGATGCGCATGGAA         CTCGAGGAACTG CTG CAGATCCTCAAG         CGCTGAGGTATTACT  69 110
TspCOW1_04920 NONE
TspCOW1_04910 NONE
TspCOW1_04900  543955 ..  543980 - -12.7  -2.71712   CTCGCTGCGGGAAAT         GTCGGGTTA-CG CTG CGCTAACCCGAC         CTACGGAATTTCTGA  73 379
        aspC  540258 ..  540269 -  -3.6  -3.13258   AATACACGGAACACA                CGGA AAAT CCCG                 GGTTGAAAACCTTTT  45 122
TspCOW1_t00060  540066 ..  540087 - -15.9  -5.63517   GCCGTAAACAAAAAA           GCCCGCATC GACC GATGCGGGC            TTTCGCGTTTGGCTC 100 35
TspCOW1_04850  537120 ..  537139 -  -4.8  -3.96624   TATGCGGATTATAAA            GGCAGTCG CTGT CGGCGGCC             TTGCATCCATGGCCG  62 118
TspCOW1_04830  535382 ..  535398 -  -6.5  -3.04983   CACATACCAGACAGA              GTCATGC GGG GCAAGAC              TATCGTAAGCGGCTT  52 260
        ompA  500307 ..  500334 - -18.4  -2.82327   TGTTCAGACTGAAAT        GCCTCCCCCGCC GGCC GGCGGGGGAGGA         GGGAGCCACGGTCGG 100 44
TspCOW1_04520  499320 ..  499372 -  -9.7  -4.13995   TTGCGAGAAACGAAA GTGACGAAGCAATCTCGTGATCGGG CTG CCGGGTTACGAGATTGCCGCGGCGC TACGCGCCTCGCAAT  80 105
TspCOW1_04510  497814 ..  497836 -  -7.6  -2.71011   ACGTGCGGTGAACGA           TGGGTTGCGC TGC GCTCCACCCA           TCCTACGGGTCTGCG  54 63
        ubiG NONE
TspCOW1_04490 NONE
TspCOW1_04480 NONE
TspCOW1_04470  493750 ..  493781 - -14.4  -2.78816   GGATGGGTGACCAGA      GATGGGTTGCGGCG CAGG CGCCTCCACCCATC       CTACTTCTGCGGACC  80 26
TspCOW1_04460 NONE
TspCOW1_04450 NONE
TspCOW1_04440  490139 ..  490173 -  -3.5  -2.88663   ATGCAGGCCGACACA    CCGGTGATCACGCCTG CCGG CAGGCA-GACCACTGC     CCGCAAGTGGTCGCG  43 512
TspCOW1_04420  487944 ..  487975 - -14.4  -2.71924   CACGGCGCGGTAAAT      GATGGGTTGCGGCG CAAG CGCCTCCACCCATC       CTACGCGATGGAATC  80 26
TspCOW1_04330 NONE
TspCOW1_04320 NONE
TspCOW1_04310 NONE
TspCOW1_04300  478038 ..  478076 -   -10  -3.12351   TTGGCGCAGACGGAA   GCGGCGGCGGACCCGCGG GCG CAGCTGGTCCGCAGCGGT   GTCCCGGCGGGGGCC  62 316
TspCOW1_04240 NONE
TspCOW1_04230 NONE
TspCOW1_04220  471288 ..  471298 -  -8.2  -2.66316   CGGTGGACGAGATCA                 CGCC CGA GGCG                 ATGGCGCTGCTGACG  52 349
TspCOW1_04190  468361 ..  468405 - -17.4  -3.54741   GATGACCCTCTGAAA GGGGTCGGTGACAAAACGCAA TCAT TTTCA-TTTGTCACCGACCCC TTTAAAGGAGGCGAG  95 53
TspCOW1_04130 NONE
TspCOW1_04120  465941 ..  465964 - -13.8  -3.80573   GCCATTACGATCAAA          GGCCCGGGGT TCTG ATCCCGGGCC           TTTCTTGTATAGCGA  93 58
       pcm_1 NONE
TspCOW1_04080  461502 ..  461513 -  -5.8  -2.71364   CTACGCTCGCAATGA                CGTG GGGA CACG                 GGGTCACTGGAATTT  47 78
        rtcB  459904 ..  459915 -  -4.4  -3.09878   TTCATCCACCTAACA                CAAC ATAT GTTG                 TCCGTGCCTTCCGTG  47 64
TspCOW1_04060  457628 ..  457638 -  -6.8  -3.30124   CGTGATCGTGTACAA                 CACC GAG GGTG                 CCGATGCCCAGCAGG  54 416
TspCOW1_t00030  454070 ..  454095 - -13.3  -4.84918   GGCAGAAATAGAAAA         GGACCTGACCG GTTC CGGCCAAGTCC          TTGATTTCATGGTGG 100 35
TspCOW1_04020 NONE
TspCOW1_04010  451299 ..  451314 - -11.8   -5.0133   GACCCGGTGAAAAAA              GGCGGC CGCG GCCGCC               TTTTTCATGTCCCTC 100 54
TspCOW1_03970 NONE
TspCOW1_03960 NONE
TspCOW1_03950 NONE
TspCOW1_03940  445168 ..  445185 -  -9.8  -3.31144   CGGTCAGCCGGAGAA             CCGGGC GTTTCA GCCCGG              AGGCGGGAGGTGCCG  66 103
TspCOW1_03930 NONE
      resA_1  443712 ..  443751 -  -9.2  -2.78384   GCCCGTCTGATTATA  GAGCCCGGGCGGCG CTTCATCAGCCC CGCCGGCCCGGCTC   AGCGCATCAGCCCGC  61 24
TspCOW1_03910  443150 ..  443171 - -15.1  -4.54727   GGCCGGAAACGAAAA           CGCCCCGGC CTGG ACCGGGGCG            CCACGGTTCTGTCTG 100 56
        hypF NONE
        hypE  439508 ..  439554 -  -8.1  -3.28119   ATGGAGTCAGACGAA GCCTTGTAGGTTGGGTTA-GCCC GCA GGGCGTAAGCCAACGTTCA-GGC CTGTTCGTTGGGTTA  59 160
TspCOW1_03870  437316 ..  437336 -  -5.4  -3.43203   GCAGGATAACAGGAA           TCCGGCGCG GTCT CA-GCCGGA            CGGCCGGATCCGGGC  53 17
TspCOW1_03860  436590 ..  436601 -  -2.2  -3.57144   TTGCGGAGTTGGAAA                TCCC GCTG GAGA                 TCGTCGCCACGGATT  48 503
        hypC NONE
        hybF NONE
TspCOW1_03700 NONE
TspCOW1_03690  421683 ..  421703 - -11.1  -2.79183   GCGACCGGCACGACA            GCCTGATCG CGC CGATCTGGC            TGCACTGCTTCTACA  60 450
        galE NONE
TspCOW1_03600 NONE
TspCOW1_03590 NONE
TspCOW1_03580  409214 ..  409229 -    -6  -2.87211   AGGCCGGCTCAGAGA              CGCGCC ACCG GGCGCT               GGTGAAAGGTGCGGT  51 3
TspCOW1_03570  406754 ..  406765 -  -7.2  -2.83271   GGACTGGTACAACCA                GCGG GTCA CCGC                 CTGCAAGGACGACGA  50 219
       ycf24 NONE
TspCOW1_03540 NONE
        sufD NONE
TspCOW1_03520 NONE
TspCOW1_03510 NONE
        sufE  401154 ..  401168 -  -6.4  -2.87132   CCTCTGCGGGAGATA               TCCCTG AAA CAGAGA               CACGCGAATCTGGTA  51 121
TspCOW1_03490  400340 ..  400352 -  -4.8  -3.45031   TTGGTAAAAACTGAA                CAGG GCCCG CCTG                ACTCGAGGCTCGTCA  51 204
      asnB_1  396384 ..  396417 -  -2.9  -2.76322   GCAGTGAATACAGCA     GCGACCGGAGCATGC TCAG GCGTGTTCCTGCAGC      CAGAGTTCCAGCATC  41 7
TspCOW1_03450  395313 ..  395337 -  -9.9   -2.9162   CAATCGGCGAAAGGA          GGGCGGCGC CGGCAAC GCGCGGCCC          CGGCAGGCGCATAGG  62 215
TspCOW1_03260  371230 ..  371257 -  -2.7  -5.86332   TGAATGTAAAAAAAA        TGGACATGATCG GGCGT CGGCCATG-CCA        CTCAATTGCGCTGCG  95 117
TspCOW1_03250  370113 ..  370134 - -14.5  -5.71712   GTGTACATAAAAAAA           GCCCGCAAT CTGA ATTGCGGGC            TTTTTCGTGAGTGCC 100 54
TspCOW1_03240  368855 ..  368867 -  -6.9   -3.4072   GATGCTGGAGCACAA                CGGCA GGG CGCCG                GTGGAATGAGGGGAA  58 59
        mltD  351332 ..  351372 -  -4.5  -3.34088   AGGATTACAGAGCAA  GTAGGATGGGTGAAGGCGC GCG GCGCCGCAACCCATTATCC  AGCTGGCGATGGGTT  51 85
TspCOW1_03100  349940 ..  349952 -  -4.7  -3.53012   CGCCGTGGTGGCAAA                GGCTG ATG CCGCC                GTGGCCGGGCTGCTG  52 524
TspCOW1_02940 NONE
TspCOW1_02930 NONE
TspCOW1_02920  331501 ..  331511 -  -2.4  -2.62184   GCCGCGTCCACATCA                 GCCG AAG CGCC                 CCGCCTGGTAGCGGT  38 12
TspCOW1_02910  330344 ..  330357 -  -5.9  -3.35679   GGTGCTGATGGATAA               CGGCG ATGC CACCG                TGACCATGCTGCGTG  55 492
        lsrG  323886 ..  323901 -  -3.2  -3.35679   GCGGGCGAGGGAGAA              GGGC GCGATCAT GCCC               CGGCTCCGCCGTGCG  47 18
TspCOW1_02860 NONE
TspCOW1_02850  321795 ..  321809 -  -4.2  -3.41051   CGAGGGGCAGGAGAA               CTGCCA GGG CGGCAA               GCGCTGCCTGACCCA  49 315
TspCOW1_02820  318802 ..  318819 -  -8.3  -3.05384   GCGCTGCGCATCGAA             CCGGAGC GTCT GCGCCGG              GTGCGCGAGCAGCGC  55 234
        ppsA  313983 ..  313993 -  -6.8  -3.48276   CGCTTTCTCATAGAA                 TCCC TTC GGGA                 TCCATCATGAGTACC  60 150
TspCOW1_02770 NONE
TspCOW1_02760 NONE
TspCOW1_02750 NONE
        rsgA  310044 ..  310065 -  -2.2  -4.13995   GCGGGACAAAGCAAA           GCGAAGAC TGACCT GCATTCGC            TGCATTTGCCGACCT  59 162
TspCOW1_02710  308502 ..  308521 -    -7  -3.01712   CGTCGCCGTGGAACA            GGCCACCG ATTT CCGCGGCC             TGTATTTCGTCCTCA  51 370
TspCOW1_02660 NONE
TspCOW1_02650  303127 ..  303168 -   -10  -5.28481   GAGTTAATGAAAAAA GTCGGGCCGTCTGCCGCCGC GCGG GCGGCGGC-G-CGGGCCGGG TGTATTCAGATCAGT 100 36
      metK_1  301845 ..  301862 - -12.7  -5.30616   TCAGGCAAAGAAAAA             GGCCCCT GAAA AGGGGCC              TTTGACTTGCTGCGG 100 56
TspCOW1_02630  299735 ..  299768 - -20.4  -4.07568   TGGCTGGGTTGAAAA     GACACCGGCCCCGGT GGCGA ACCGGGGCCGGTG-C     AGCGGGCGGGACGGG 100 57
TspCOW1_02600  296960 ..  296992 - -14.1  -2.71924   CACGGCGCGGTAAAT      GATGGGTTACGGCGC ATT GCGCCTCCACCCATC      CTACGCCTTCAGACA  80 26
TspCOW1_02590  294254 ..  294295 -  -6.6  -3.10354   CATAGGCAGGCAATA CGTGATTCCGTCATCCCGGC GCAG GCCGGGATC-CAGAAGC-CG CCGCGGGTATCGGAT  52 87
TspCOW1_02580  292827 ..  292851 -  -7.8  -3.32844   CCCGGCAGGGCATAA         CCCGACGC-GG ACTC CCTGTGTCGGG          TTACGCTGCGCTGAT  61 90
TspCOW1_02570  292176 ..  292197 -  -3.6  -3.28712   GGTGCTGGCGGATAA           CCCCAACG TCGCCG CGCTGGTG            GACAACGGCTGGCTG  47 215
         cpx  285343 ..  285375 -  -7.6  -2.62983   CCTACCGGGACATTA     CGCCGGACGAGGCCG GTGA CGGTCGC-TCCGACG      GGCAACGGGTACGCT  50 436
TspCOW1_02510  283510 ..  283527 -  -4.9  -3.00651   GCCTATACGATAAAT             CTGCCAGA CTT TCT-GCAG             GAAATACCCGGTTCT  46 404
      rpfG_1 NONE
TspCOW1_02490  279514 ..  279528 -  -7.1  -3.05343   GGGATATCTGCAATA               CCCTG GATTA CAGGG               AGCTTCTCGCTATCA  51 186
TspCOW1_02470  278143 ..  278154 -  -3.6  -3.29144   CGAGCTGTTTTACAA                CACC AAAC GGCG                 TCACGGCTACAACGC  47 73
TspCOW1_02410  271560 ..  271574 -  -2.8  -4.36595   CATGGAAAGTGAAAA               TTAGAC TGT GTCTAG               AGCGGTTCAATCAAC  64 121
TspCOW1_02400 NONE
TspCOW1_02390  270189 ..  270211 -  -2.6  -3.84451   CTCTTCAAACGTAAA           TCGTCAGC CGTATTC GCCGACGT           GCTTCAGAATGCTCC  53 6
TspCOW1_02380  266905 ..  266919 -  -3.4  -2.87564   GCATGCCGGGAGACA               CCGCTC ATC GCGCAG               CCCCTGCACCAATCG  42 15
TspCOW1_02370 NONE
TspCOW1_02360  258887 ..  258910 -  -5.3  -2.66272   CGGTACCGAAATCGA          CGCCCAT CCTCACGACC ATGGGCG           GTCCGTTACCCGAGT  46 453
TspCOW1_02350 NONE
TspCOW1_02340 NONE
TspCOW1_02330 NONE
TspCOW1_02320 NONE
TspCOW1_02310  250653 ..  250665 -  -9.1  -3.27525   TGCTCTGAAATCGAA                TCGGC GCA GCCGA                TTGACTCATGTAAAC  63 31
TspCOW1_02300  249555 ..  249569 -  -4.2  -3.86015   GAGTCCGGGCACAAA               GCGC GGCCCAT GCGC               GAAGAATGGGTAGCT  57 208
TspCOW1_02000 NONE
TspCOW1_01990 NONE
TspCOW1_01980  225547 ..  225574 - -14.2  -4.10566   ACTGAAGAACAAGAA        GCCCAAGCGCCT GATG AGGCACTTGAGC         CAGTGCAGGGGTGAG 100 43
TspCOW1_01840 NONE
TspCOW1_01830  213108 ..  213120 -  -6.2  -3.35371   TATATGTTCAAGCAA                GCCC GCAAG GGGC                GCTGGGAATTGCCCG  55 192
TspCOW1_01800 NONE
TspCOW1_01790 NONE
         int NONE
TspCOW1_01770  208515 ..  208525 -  -2.4  -3.23452   AGGTTCAGAATCCAA                 GCTG TTT CCGC                 TGCAGCTCCCAGACC  44 4
TspCOW1_01710  198929 ..  198977 -  -9.7  -2.82623   GCTGCCCCATAACGA CGAAGGGGAAGCG--CGGGCC TAATCGAAC AGCTCGAACGCTTCCCCTTCG GATGACTCACCACAG  61 211
TspCOW1_01700 NONE
TspCOW1_01690 NONE
TspCOW1_01680  195951 ..  195978 - -11.2  -4.62471   GGCAAGCCCGAAAAA        GCAACGGCGAGG TCGC CCCCGCCGTCGT         GTCCAGCCCAGCACC  93 52
TspCOW1_01670 NONE
TspCOW1_01660 NONE
TspCOW1_01650  192886 ..  192902 -  -5.1  -4.62336   AGTCTACTGGAAAAA              CTTGTTG AAT CAACAGG              TTAATTTACTTTTTA  72 89
TspCOW1_01640  191860 ..  191874 -    -7  -2.78384   GCCCGGGTGAGGATA               GCGGCG TGA CGACGC               TCCCGGGCTTTCGAC  51 107
TspCOW1_01630  189984 ..  190001 - -11.3  -3.23274   CTGTGGATAATTGAA             GCCGTCA CCAG TGACGGC              GAGGTCGATATTCAC  66 228
TspCOW1_01610 NONE
TspCOW1_01600 NONE
TspCOW1_01590  185205 ..  185215 -  -6.8  -3.31144   CCTGTATGCCGACAA                 CCAG CAT CTGG                 TGCGCGCAGTGCAGG  54 362
TspCOW1_01490  163837 ..  163853 -  -2.2  -4.21194   GCCGAGCATGGAAAA              TGGCTG GCATT CAGGCA              GCGGGTCCAGAGCCC  59 97
TspCOW1_01470  162427 ..  162442 -  -3.9  -4.19238   CGCTGAAGCCGAAAA              GCCAG AAGAGG CCGGC               GCAGAACAGCGTGAT  62 90
TspCOW1_01460  161720 ..  161737 - -14.1  -4.96848   TCCGCCATATAAAAA             GGGCCCC AACC GGGGCCC              TTTTTATATGGCGGA 100 272
TspCOW1_01370 NONE
TspCOW1_01360  151972 ..  151982 -  -2.6  -3.62597   TGCATTCGGCAACAA                 TTTT AGT AAAA                 ATTCATGCATTTATG  47 152
TspCOW1_01350 NONE
TspCOW1_01340 NONE
TspCOW1_01330  148409 ..  148421 -  -4.7  -4.18401   CGATACAGGCCAAAA                CGGTC AAC GTCCG                GACCACTCACCGCAC  66 440
TspCOW1_01290 NONE
TspCOW1_01280  145619 ..  145648 - -12.3  -2.71101   CGCGGAAATAACGGA       CGAAAGATGGCACC TGG AG-GCCATCTTTCG       CACTTGAAAAACACA  70 320
TspCOW1_01270  145158 ..  145172 -  -2.1  -2.99471   CCATGCCGACAGATA              CCGACC AAAT GGT-GG               CGTGCAATGGACAGT  40 88
TspCOW1_01260  144384 ..  144401 -  -7.7  -2.70932   GCTCTGTCTGAACCA             GGC-GCTG GTG CAGCCGCC             AGACGAGAGTGGCTT  51 346
TspCOW1_01240 NONE
TspCOW1_01230 NONE
TspCOW1_01220 NONE
TspCOW1_01210  139066 ..  139076 -  -2.4  -3.05384   GTTCGGTTGATGTAA                 GGGC GGG GCAC                 CGTCAGGTACCTTCC  41 94
TspCOW1_01200  138206 ..  138221 -    -6  -3.57144   CCCCTTACCCTTAAA              GGGCCC TTTA GGGCGC               ACACTGCTACGTCAG  58 68
TspCOW1_01190 NONE
TspCOW1_01180  137154 ..  137165 -  -2.2  -2.53271   CGAGTCGCACAACAC                GCTGC CAG GC-GC                AAACCGCACCAGTCG  38 72
TspCOW1_01170  136844 ..  136866 -  -9.9  -2.64747   TCATGGCACCAGAAT          CCG-CCAGGA CTCA TCCTGGACGG           CCTCGATGTTGTCTG  60 59
TspCOW1_01160 NONE
        parB  133402 ..  133417 -  -3.2  -3.28712   CCGTTCTGTCCAGAA              CAGGTG AATC CATCTG               TCTTCCTCCTTGTCT  45 40
TspCOW1_01140  133144 ..  133155 -  -5.8  -3.33419   ATGTGCAAACTAATA                GACG ATAA CGTC                 AGTCCTCATCAAGGA  53 24
TspCOW1_01130  132148 ..  132182 -   -13  -2.72799   GCCGGAGACACACCA    CGCCCCTGCACGGGAA GGTGT TTCCCG-GCAGGG-CG    GTTGAAAATGTAGTC  73 134
TspCOW1_01120  131776 ..  131818 - -14.1  -3.16564   TGGCCACGGTAGTAA TCGTCTCTCCGCAGGGCCG ACACG CGACCCTCTGGAGAGACGC CGCAAAATGCGGCGC  83 46
TspCOW1_01110  131070 ..  131084 -  -3.4  -2.81272   CATTACCACGGAAAC               GCCGCG TCG CATGGC               TATTCCTCCCTATGT  41 35
TspCOW1_01100  130751 ..  130795 - -19.3  -3.57144   GTCGCCACGGTGAAA TCGCCTTTCCCCAAGGCCCGC AGC GCAGGCCTTTGGGAAAGGCCG CCCCCGAAGGGGCGG 100 48
TspCOW1_01090 NONE
TspCOW1_01080  129748 ..  129762 -  -5.6  -2.74192   GAGCCGGTAACACCA               TGCCCC GTG GGGGAA               GATGGTTTCCCCGGC  47 63
TspCOW1_01070  129038 ..  129082 - -21.5  -3.89346   TCGCCACGGTAGAAA CTACCTTTCCCGAAGGCCCGC GCC GCAGGCCTTCGGGAAAGGCCC CCCGCAGGGGACCGG 100 51
TspCOW1_01060  128297 ..  128341 - -14.3  -4.18197   ATGGTTGATTGAAAA GCCACGGGAGGCG-ATGCCCC GCAAG GGGGCATACGCC-CCCGAGGG GTTTGGGCCGGCAAT 100 54
TspCOW1_01050 NONE
TspCOW1_01040  126670 ..  126714 - -13.5  -3.89346   TCGCCACGGTAGAAA CCGCCTTTCCGCAAGGCCCGC GCC GCAGGCCTTCGGGAAAGGCCC GCCCCGGAGGGGCGG  93 47
TspCOW1_01030  125835 ..  125878 - -14.6  -3.75332   AGTGTTGAAGTGAAA CCACCGAAGGCACGTCTCCCC ACC GGGGATAGATGCC-CCGGTGG GGAAGATGACGCTAG  95 43
TspCOW1_01020  123526 ..  123545 - -10.6  -5.36965   GAATATCAGAAAAAA            TGGCCGCC CGAA GGCGGCCT             GGAGATTAGGCGGCA 100 31
TspCOW1_00990  120598 ..  120608 -  -2.4  -3.36878   CCCAGTCATTCACAA                 CCGG CTG CCTG                 TTGGCCCTGGTATTC  46 252
TspCOW1_00910 NONE
TspCOW1_00900 NONE
TspCOW1_00890 NONE
TspCOW1_00880 NONE
TspCOW1_00870 NONE
TspCOW1_00860 NONE
        traB NONE
TspCOW1_00840 NONE
TspCOW1_00830 NONE
        traC NONE
TspCOW1_00810 NONE
        lepB NONE
        traW NONE
        traU NONE
TspCOW1_00770 NONE
TspCOW1_00760   98315 ..   98342 -  -3.4  -3.14132   TGCGTTGGTCAGTAA        CATGAGCA-GGAG AAG CGCCGTTCTCATG        GTTGTGACCTCGCCT  43 21
TspCOW1_00750 NONE
        traF NONE
        traH NONE
        traG   91906 ..   91927 -  -8.8  -3.98661   GAGAGGGAGTATAAA           CTTGCGAA ACAGGA TTCGCAAG            AAAACATTGCGTTAC  75 317
TspCOW1_00700 NONE
TspCOW1_00690 NONE
TspCOW1_00680   88716 ..   88735 - -10.7  -3.59979   TTTCTCCATTTGAAA            CAGCGCC CCATAT GGCGCTG             TGACGGCCCTTTCGG  71 85
TspCOW1_00670 NONE
TspCOW1_00660 NONE
TspCOW1_00650 NONE
TspCOW1_00640   81317 ..   81329 -  -4.8  -3.51825   GGACGCCAAGGACAA                GGCT CTTGT AGCC                GCAATATACCAGCGT  52 490
TspCOW1_00610   78835 ..   78847 -  -5.5  -3.53563   ATACGGCGGTTCAAA                GGCCT GGA AAGCC                CAGTGGTGGTGCTGG  54 298
TspCOW1_00550 NONE
TspCOW1_00540 NONE
TspCOW1_00530 NONE
TspCOW1_00520   64762 ..   64776 -  -8.6  -3.20382   TTCCACATCTACGAA               CTGGAT GGC ATCCAG               CGTATCGAAACAAAG  63 465
         gst NONE
        morB   61980 ..   61995 -    -6  -3.78409   TCAACCGAAGCGAAA              CGCGCG ATGC CGCGCC               CAGGTATCGGGCGGC  62 102
TspCOW1_00470 NONE
TspCOW1_00460 NONE
TspCOW1_00450   58171 ..   58190 - -13.6  -3.40403   GGTGGCCGACGATAA            CGAGGTCG GCGC CGACCTCG             CGGACAAAATCGCCG  75 407
TspCOW1_00290 NONE
TspCOW1_00280   37859 ..   37880 -  -6.5  -3.14051   CTATTCCGACGAAGA           TGACCGTCG ATTC CGACGATCG            TGACCGCCTGTGAAG  52 79
TspCOW1_00250   34458 ..   34484 - -12.2  -3.30159   GGAAGGCCGTGACAA         CCTGGCGCGAAG AGG CTGCGCGACAGG         GTTTGTCGCAAGCCG  75 270
        mutS   30055 ..   30085 -  -3.1  -3.36492   GGCGTAATCCGACAA       CATCAGCGGTACC TGTCG GGTTACGCTGGCG       CCAACCCGACCTACA  47 197
TspCOW1_00220   27769 ..   27788 -  -2.8  -3.83026   GGCGTCGAGATGAAA            CAGCACATG AAG CATG-GCGG            TTGCCGCTCCCGCTC  55 39
TspCOW1_00210 NONE
        wspC NONE
TspCOW1_00190 NONE
TspCOW1_00180 NONE
       cheB2 NONE
        wspR NONE
TspCOW1_00150   19876 ..   19907 -  -8.6  -2.72144   GCAGTGGCGGCAAAC      GATGGGTTGCGGCG CAAA CGCCTTCACCCATC       CTGCGCCTTCAGGCA  58 108
TspCOW1_00140   16575 ..   16621 -  -7.1  -3.54424   CCGCAGGCCGGTAAA CTC-GGCGGCGGAATGTCGGCG GCAG CGGCGTATTTCCGCCGCGTGAG AGCGGGGATCGCAGC  60 314
TspCOW1_00120   13041 ..   13084 -  -5.9  -3.05384   GGTCGGGTTAGCGAA GCGTAACCCGACAGAGATG CCGCGC CGTGAACGTCGGGTTACGC CCTTCGGGCTAACCC  49 71
       trx_1   11880 ..   11905 -    -4  -3.59979   GCGCTGGACGGCAAA         CCCTTGCG ATGATGTAGA CGCAAGAG          ACAAGGTGCAAGGAT  51 235
TspCOW1_00080    7134 ..    7152 -  -4.4  -4.25104   CTTCGTCGACGAAAA             CCTCGCCA GCC TGGCCCGG             GTCTTCCTCGAGGCG  66 147
        mobA    4623 ..    4679 -  -5.2  -3.82499   ACGAAACCCACTAAA GGGGTTATTGCTTGCATTGCCATGGCGC TAT GCGCC-TGGCAATGCATACA-CAAGGCA TTTTTGTGGTTTTCG  61 57
TspCOW1_00030    3867 ..    3880 -  -4.5  -2.53213   GAATTGGCGAAGGCA               GGCAC GTCA ATGCC                GGCGCGCACCGGCTC   0 201
