locus-tag class description THMIRHAT_00010 PF08299 Bacterial dnaA protein helix-turn-helix THMIRHAT_00010 PF11638 DnaA N-terminal domain THMIRHAT_00010 PF00308 Bacterial dnaA protein THMIRHAT_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain THMIRHAT_00020 PF02767 DNA polymerase III beta subunit, central domain THMIRHAT_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain THMIRHAT_00030 PF02463 RecF/RecN/SMC N terminal domain THMIRHAT_00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_00040 PF18053 DNA gyrase B subunit insert domain THMIRHAT_00040 PF00986 DNA gyrase B subunit, carboxyl terminus THMIRHAT_00040 PF00204 DNA gyrase B THMIRHAT_00040 PF01751 Toprim domain THMIRHAT_00050 PF00485 Phosphoribulokinase / Uridine kinase family THMIRHAT_00090 PF01479 S4 domain THMIRHAT_00100 PF01218 Coproporphyrinogen III oxidase THMIRHAT_00110 PF07720 Tetratricopeptide repeat THMIRHAT_00110 PF01435 Peptidase family M48 THMIRHAT_00120 PF01300 Telomere recombination THMIRHAT_00170 PF02203 Tar ligand binding domain homologue THMIRHAT_00170 PF00672 HAMP domain THMIRHAT_00170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_00190 PF03441 FAD binding domain of DNA photolyase THMIRHAT_00190 PF00875 DNA photolyase THMIRHAT_00210 PF04244 Deoxyribodipyrimidine photo-lyase-related protein THMIRHAT_00240 PF00271 Helicase conserved C-terminal domain THMIRHAT_00240 PF00176 SNF2 family N-terminal domain THMIRHAT_00240 PF12419 SNF2 Helicase protein THMIRHAT_00250 PF01636 Phosphotransferase enzyme family THMIRHAT_00260 PF01367 5'-3' exonuclease, C-terminal SAM fold THMIRHAT_00260 PF01612 3'-5' exonuclease THMIRHAT_00260 PF00476 DNA polymerase family A THMIRHAT_00260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THMIRHAT_00290 PF01553 Acyltransferase THMIRHAT_00290 PF00501 AMP-binding enzyme THMIRHAT_00320 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) THMIRHAT_00330 PF01432 Peptidase family M3 THMIRHAT_00340 PF00881 Nitroreductase family THMIRHAT_00350 PF01894 Uncharacterised protein family UPF0047 THMIRHAT_00360 PF02203 Tar ligand binding domain homologue THMIRHAT_00360 PF00672 HAMP domain THMIRHAT_00360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_00370 PF00672 HAMP domain THMIRHAT_00370 PF02203 Tar ligand binding domain homologue THMIRHAT_00370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_00430 PF02690 Na+/Pi-cotransporter THMIRHAT_00440 PF03600 Citrate transporter THMIRHAT_00450 PF06965 Na+/H+ antiporter 1 THMIRHAT_00460 PF00072 Response regulator receiver domain THMIRHAT_00460 PF00989 PAS fold THMIRHAT_00460 PF01627 Hpt domain THMIRHAT_00460 PF18415 Histidine kinase receptor ArcB trans-membrane domain THMIRHAT_00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_00460 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_00490 PF09308 LuxQ, periplasmic THMIRHAT_00490 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_00490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_00490 PF00072 Response regulator receiver domain THMIRHAT_00500 PF04333 MlaA lipoprotein THMIRHAT_00510 PF03466 LysR substrate binding domain THMIRHAT_00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_00530 PF00563 EAL domain THMIRHAT_00530 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_00530 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_00560 PF00672 HAMP domain THMIRHAT_00560 PF02203 Tar ligand binding domain homologue THMIRHAT_00560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_00570 PF00034 Cytochrome c THMIRHAT_00570 PF14376 Haem-binding domain THMIRHAT_00570 PF03150 Di-haem cytochrome c peroxidase THMIRHAT_00580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAT_00580 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAT_00580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAT_00590 PF01323 DSBA-like thioredoxin domain THMIRHAT_00600 PF01578 Cytochrome C assembly protein THMIRHAT_00610 PF05140 ResB-like family THMIRHAT_00620 PF01926 50S ribosome-binding GTPase THMIRHAT_00630 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_00630 PF00072 Response regulator receiver domain THMIRHAT_00640 PF00672 HAMP domain THMIRHAT_00640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_00640 PF00072 Response regulator receiver domain THMIRHAT_00640 PF01627 Hpt domain THMIRHAT_00640 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_00650 PF00570 HRDC domain THMIRHAT_00650 PF16124 RecQ zinc-binding THMIRHAT_00650 PF00271 Helicase conserved C-terminal domain THMIRHAT_00650 PF09382 RQC domain THMIRHAT_00650 PF00270 DEAD/DEAH box helicase THMIRHAT_00680 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_00700 PF04261 Dyp-type peroxidase family THMIRHAT_00710 PF01850 PIN domain THMIRHAT_00730 PF00873 AcrB/AcrD/AcrF family THMIRHAT_00740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_00750 PF00563 EAL domain THMIRHAT_00750 PF01590 GAF domain THMIRHAT_00750 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_00750 PF00360 Phytochrome region THMIRHAT_00770 PF16200 C-terminal region of band_7 THMIRHAT_00770 PF01145 SPFH domain / Band 7 family THMIRHAT_00790 PF04074 YhcH/YjgK/YiaL THMIRHAT_00800 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAT_00800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAT_00800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAT_00810 PF01180 Dihydroorotate dehydrogenase THMIRHAT_00820 PF01914 MarC family integral membrane protein THMIRHAT_00870 PF00578 AhpC/TSA family THMIRHAT_00870 PF10417 C-terminal domain of 1-Cys peroxiredoxin THMIRHAT_00900 PF13519 von Willebrand factor type A domain THMIRHAT_00930 PF01882 Protein of unknown function DUF58 THMIRHAT_00940 PF07726 ATPase family associated with various cellular activities (AAA) THMIRHAT_00940 PF17863 AAA lid domain THMIRHAT_00950 PF00672 HAMP domain THMIRHAT_00950 PF02203 Tar ligand binding domain homologue THMIRHAT_00950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_00960 PF00072 Response regulator receiver domain THMIRHAT_00960 PF09308 LuxQ, periplasmic THMIRHAT_00960 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_00980 PF08003 Protein of unknown function (DUF1698) THMIRHAT_00990 PF13649 Methyltransferase domain THMIRHAT_01010 PF13847 Methyltransferase domain THMIRHAT_01020 PF07726 ATPase family associated with various cellular activities (AAA) THMIRHAT_01020 PF17863 AAA lid domain THMIRHAT_01060 PF13519 von Willebrand factor type A domain THMIRHAT_01090 PF00085 Thioredoxin THMIRHAT_01130 PF00069 Protein kinase domain THMIRHAT_01130 PF03793 PASTA domain THMIRHAT_01150 PF00156 Phosphoribosyl transferase domain THMIRHAT_01160 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_01160 PF05230 MASE2 domain THMIRHAT_01170 PF14698 Argininosuccinate lyase C-terminal THMIRHAT_01170 PF00206 Lyase THMIRHAT_01190 PF03900 Porphobilinogen deaminase, C-terminal domain THMIRHAT_01190 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain THMIRHAT_01200 PF02602 Uroporphyrinogen-III synthase HemD THMIRHAT_01250 PF00871 Acetokinase family THMIRHAT_01260 PF01515 Phosphate acetyl/butaryl transferase THMIRHAT_01260 PF07085 DRTGG domain THMIRHAT_01270 PF06969 HemN C-terminal domain THMIRHAT_01270 PF04055 Radical SAM superfamily THMIRHAT_01280 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_01280 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_01280 PF00563 EAL domain THMIRHAT_01300 PF02390 Putative methyltransferase THMIRHAT_01310 PF00730 HhH-GPD superfamily base excision DNA repair protein THMIRHAT_01310 PF10576 Iron-sulfur binding domain of endonuclease III THMIRHAT_01310 PF14815 NUDIX domain THMIRHAT_01310 PF00633 Helix-hairpin-helix motif THMIRHAT_01320 PF04362 Bacterial Fe(2+) trafficking THMIRHAT_01330 PF00563 EAL domain THMIRHAT_01330 PF08668 HDOD domain THMIRHAT_01350 PF13932 GidA associated domain THMIRHAT_01350 PF01134 Glucose inhibited division protein A THMIRHAT_01360 PF02527 rRNA small subunit methyltransferase G THMIRHAT_01370 PF13614 AAA domain THMIRHAT_01380 PF17762 HTH domain found in ParB protein THMIRHAT_01380 PF02195 ParB-like nuclease domain THMIRHAT_01410 PF00119 ATP synthase A chain THMIRHAT_01420 PF00137 ATP synthase subunit C THMIRHAT_01430 PF00430 ATP synthase B/B' CF(0) THMIRHAT_01440 PF00213 ATP synthase delta (OSCP) subunit THMIRHAT_01450 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMIRHAT_01450 PF00306 ATP synthase alpha/beta chain, C terminal domain THMIRHAT_01450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAT_01460 PF00231 ATP synthase THMIRHAT_01470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAT_01470 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMIRHAT_01480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THMIRHAT_01480 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THMIRHAT_01490 PF12804 MobA-like NTP transferase domain THMIRHAT_01490 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_01500 PF01040 UbiA prenyltransferase family THMIRHAT_01540 PF04345 Chorismate lyase THMIRHAT_01550 PF00271 Helicase conserved C-terminal domain THMIRHAT_01550 PF17191 RecG wedge domain THMIRHAT_01550 PF00270 DEAD/DEAH box helicase THMIRHAT_01560 PF00909 Ammonium Transporter Family THMIRHAT_01560 PF00672 HAMP domain THMIRHAT_01570 PF01042 Endoribonuclease L-PSP THMIRHAT_01580 PF01297 Zinc-uptake complex component A periplasmic THMIRHAT_01590 PF00005 ABC transporter THMIRHAT_01600 PF00950 ABC 3 transport family THMIRHAT_01610 PF00950 ABC 3 transport family THMIRHAT_01620 PF00672 HAMP domain THMIRHAT_01620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_01620 PF02203 Tar ligand binding domain homologue THMIRHAT_01630 PF02824 TGS domain THMIRHAT_01630 PF13291 ACT domain THMIRHAT_01630 PF04607 Region found in RelA / SpoT proteins THMIRHAT_01640 PF01192 RNA polymerase Rpb6 THMIRHAT_01650 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THMIRHAT_01650 PF00534 Glycosyl transferases group 1 THMIRHAT_01660 PF02348 Cytidylyltransferase THMIRHAT_01670 PF00465 Iron-containing alcohol dehydrogenase THMIRHAT_01680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMIRHAT_01690 PF00625 Guanylate kinase THMIRHAT_01700 PF01202 Shikimate kinase THMIRHAT_01710 PF01761 3-dehydroquinate synthase THMIRHAT_01720 PF01263 Aldose 1-epimerase THMIRHAT_01740 PF08448 PAS fold THMIRHAT_01740 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_01750 PF00155 Aminotransferase class I and II THMIRHAT_01760 PF01556 DnaJ C terminal domain THMIRHAT_01760 PF00226 DnaJ domain THMIRHAT_01780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_01780 PF00672 HAMP domain THMIRHAT_01780 PF02203 Tar ligand binding domain homologue THMIRHAT_01790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_01790 PF00672 HAMP domain THMIRHAT_01790 PF01627 Hpt domain THMIRHAT_01790 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_01790 PF00072 Response regulator receiver domain THMIRHAT_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_01820 PF09308 LuxQ, periplasmic THMIRHAT_01820 PF00072 Response regulator receiver domain THMIRHAT_01820 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_01840 PF00672 HAMP domain THMIRHAT_01840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_01840 PF02203 Tar ligand binding domain homologue THMIRHAT_01850 PF03480 Bacterial extracellular solute-binding protein, family 7 THMIRHAT_01870 PF03880 DbpA RNA binding domain THMIRHAT_01870 PF00270 DEAD/DEAH box helicase THMIRHAT_01870 PF00271 Helicase conserved C-terminal domain THMIRHAT_01880 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_01880 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_01880 PF00563 EAL domain THMIRHAT_01890 PF00563 EAL domain THMIRHAT_01890 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_01890 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_01900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THMIRHAT_01930 PF00270 DEAD/DEAH box helicase THMIRHAT_01930 PF00271 Helicase conserved C-terminal domain THMIRHAT_01930 PF17764 3′ DNA-binding domain (3′BD) THMIRHAT_01930 PF18074 Primosomal protein N C-terminal domain THMIRHAT_01930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THMIRHAT_01970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_01970 PF00672 HAMP domain THMIRHAT_01970 PF02203 Tar ligand binding domain homologue THMIRHAT_01980 PF08241 Methyltransferase domain THMIRHAT_01990 PF00561 alpha/beta hydrolase fold THMIRHAT_02000 PF00155 Aminotransferase class I and II THMIRHAT_02010 PF04055 Radical SAM superfamily THMIRHAT_02010 PF06968 Biotin and Thiamin Synthesis associated domain THMIRHAT_02020 PF00156 Phosphoribosyl transferase domain THMIRHAT_02040 PF01435 Peptidase family M48 THMIRHAT_02070 PF00563 EAL domain THMIRHAT_02070 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02070 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_02090 PF00072 Response regulator receiver domain THMIRHAT_02110 PF00902 Sec-independent protein translocase protein (TatC) THMIRHAT_02120 PF02416 mttA/Hcf106 family THMIRHAT_02130 PF02416 mttA/Hcf106 family THMIRHAT_02140 PF01230 HIT domain THMIRHAT_02150 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THMIRHAT_02160 PF00977 Histidine biosynthesis protein THMIRHAT_02170 PF00977 Histidine biosynthesis protein THMIRHAT_02180 PF00117 Glutamine amidotransferase class-I THMIRHAT_02190 PF00475 Imidazoleglycerol-phosphate dehydratase THMIRHAT_02200 PF00115 Cytochrome C and Quinol oxidase polypeptide I THMIRHAT_02230 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP THMIRHAT_02230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THMIRHAT_02230 PF00034 Cytochrome c THMIRHAT_02250 PF13746 4Fe-4S dicluster domain THMIRHAT_02250 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase THMIRHAT_02250 PF12801 4Fe-4S binding domain THMIRHAT_02270 PF00403 Heavy-metal-associated domain THMIRHAT_02290 PF00271 Helicase conserved C-terminal domain THMIRHAT_02290 PF00270 DEAD/DEAH box helicase THMIRHAT_02300 PF13533 Biotin-lipoyl like THMIRHAT_02310 PF00005 ABC transporter THMIRHAT_02320 PF00005 ABC transporter THMIRHAT_02340 PF08447 PAS fold THMIRHAT_02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_02340 PF08447 PAS fold THMIRHAT_02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_02360 PF00563 EAL domain THMIRHAT_02360 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02360 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_02360 PF13188 PAS domain THMIRHAT_02380 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02380 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_02380 PF00563 EAL domain THMIRHAT_02390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMIRHAT_02390 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_02400 PF00310 Glutamine amidotransferases class-II THMIRHAT_02400 PF04898 Glutamate synthase central domain THMIRHAT_02400 PF01493 GXGXG motif THMIRHAT_02400 PF01645 Conserved region in glutamate synthase THMIRHAT_02410 PF01676 Metalloenzyme superfamily THMIRHAT_02410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) THMIRHAT_02430 PF00462 Glutaredoxin THMIRHAT_02440 PF02556 Preprotein translocase subunit SecB THMIRHAT_02450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THMIRHAT_02450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THMIRHAT_02460 PF00588 SpoU rRNA Methylase family THMIRHAT_02470 PF01180 Dihydroorotate dehydrogenase THMIRHAT_02480 PF01479 S4 domain THMIRHAT_02480 PF00579 tRNA synthetases class I (W and Y) THMIRHAT_02510 PF03309 Type III pantothenate kinase THMIRHAT_02520 PF07977 FabA-like domain THMIRHAT_02530 PF00109 Beta-ketoacyl synthase, N-terminal domain THMIRHAT_02530 PF02801 Beta-ketoacyl synthase, C-terminal domain THMIRHAT_02560 PF00448 SRP54-type protein, GTPase domain THMIRHAT_02560 PF02881 SRP54-type protein, helical bundle domain THMIRHAT_02570 PF05193 Peptidase M16 inactive domain THMIRHAT_02570 PF00675 Insulinase (Peptidase family M16) THMIRHAT_02580 PF05193 Peptidase M16 inactive domain THMIRHAT_02590 PF02203 Tar ligand binding domain homologue THMIRHAT_02590 PF00672 HAMP domain THMIRHAT_02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_02620 PF01584 CheW-like domain THMIRHAT_02640 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02640 PF00563 EAL domain THMIRHAT_02640 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_02650 PF01739 CheR methyltransferase, SAM binding domain THMIRHAT_02650 PF01339 CheB methylesterase THMIRHAT_02650 PF03705 CheR methyltransferase, all-alpha domain THMIRHAT_02650 PF08448 PAS fold THMIRHAT_02660 PF01467 Cytidylyltransferase-like THMIRHAT_02690 PF03459 TOBE domain THMIRHAT_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_02710 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_02720 PF00005 ABC transporter THMIRHAT_02720 PF03459 TOBE domain THMIRHAT_02740 PF00194 Eukaryotic-type carbonic anhydrase THMIRHAT_02750 PF00689 Cation transporting ATPase, C-terminus THMIRHAT_02750 PF00690 Cation transporter/ATPase, N-terminus THMIRHAT_02760 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain THMIRHAT_02760 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain THMIRHAT_02760 PF06827 Zinc finger found in FPG and IleRS THMIRHAT_02780 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02780 PF17158 Membrane-associated sensor, integral membrane domain THMIRHAT_02790 PF00471 Ribosomal protein L33 THMIRHAT_02800 PF00830 Ribosomal L28 family THMIRHAT_02820 PF04002 RadC-like JAB domain THMIRHAT_02850 PF04127 DNA / pantothenate metabolism flavoprotein THMIRHAT_02850 PF02441 Flavoprotein THMIRHAT_02860 PF08668 HDOD domain THMIRHAT_02860 PF00563 EAL domain THMIRHAT_02910 PF02769 AIR synthase related protein, C-terminal domain THMIRHAT_02910 PF00586 AIR synthase related protein, N-terminal domain THMIRHAT_02930 PF00672 HAMP domain THMIRHAT_02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_02930 PF02203 Tar ligand binding domain homologue THMIRHAT_02950 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02950 PF00563 EAL domain THMIRHAT_02950 PF10442 FIST C domain THMIRHAT_02950 PF08495 FIST N domain THMIRHAT_02960 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_02960 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_02960 PF00563 EAL domain THMIRHAT_02970 PF00692 dUTPase THMIRHAT_03010 PF00596 Class II Aldolase and Adducin N-terminal domain THMIRHAT_03020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMIRHAT_03020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMIRHAT_03030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAT_03030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAT_03030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAT_03030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAT_03050 PF00155 Aminotransferase class I and II THMIRHAT_03060 PF00072 Response regulator receiver domain THMIRHAT_03060 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_03070 PF04461 Protein of unknown function (DUF520) THMIRHAT_03080 PF00696 Amino acid kinase family THMIRHAT_03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_03100 PF08447 PAS fold THMIRHAT_03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_03100 PF08447 PAS fold THMIRHAT_03110 PF00691 OmpA family THMIRHAT_03130 PF00156 Phosphoribosyl transferase domain THMIRHAT_03150 PF00175 Oxidoreductase NAD-binding domain THMIRHAT_03150 PF00258 Flavodoxin THMIRHAT_03150 PF00667 FAD binding domain THMIRHAT_03160 PF02541 Ppx/GppA phosphatase family THMIRHAT_03170 PF13090 Polyphosphate kinase C-terminal domain 2 THMIRHAT_03170 PF02503 Polyphosphate kinase middle domain THMIRHAT_03170 PF13089 Polyphosphate kinase N-terminal domain THMIRHAT_03170 PF17941 Polyphosphate kinase C-terminal domain 1 THMIRHAT_03180 PF01809 Putative membrane protein insertion efficiency factor THMIRHAT_03190 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_03190 PF00563 EAL domain THMIRHAT_03190 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03210 PF01979 Amidohydrolase family THMIRHAT_03230 PF00171 Aldehyde dehydrogenase family THMIRHAT_03250 PF00270 DEAD/DEAH box helicase THMIRHAT_03250 PF00271 Helicase conserved C-terminal domain THMIRHAT_03260 PF03641 Possible lysine decarboxylase THMIRHAT_03260 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases THMIRHAT_03260 PF11892 Domain of unknown function (DUF3412) THMIRHAT_03270 PF01594 AI-2E family transporter THMIRHAT_03290 PF02649 Type I GTP cyclohydrolase folE2 THMIRHAT_03300 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAT_03300 PF07683 Cobalamin synthesis protein cobW C-terminal domain THMIRHAT_03310 PF06039 Malate:quinone oxidoreductase (Mqo) THMIRHAT_03320 PF01022 Bacterial regulatory protein, arsR family THMIRHAT_03330 PF03773 Predicted permease THMIRHAT_03350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THMIRHAT_03350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THMIRHAT_03380 PF00849 RNA pseudouridylate synthase THMIRHAT_03380 PF01479 S4 domain THMIRHAT_03390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain THMIRHAT_03390 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_03390 PF10996 Beta-Casp domain THMIRHAT_03400 PF00563 EAL domain THMIRHAT_03400 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_03400 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03410 PF00571 CBS domain THMIRHAT_03410 PF03471 Transporter associated domain THMIRHAT_03410 PF01595 Cyclin M transmembrane N-terminal domain THMIRHAT_03420 PF06250 YhcG PDDEXK nuclease domain THMIRHAT_03420 PF17761 DUF1016 N-terminal domain THMIRHAT_03440 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_03440 PF00563 EAL domain THMIRHAT_03440 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03450 PF04445 Putative SAM-dependent methyltransferase THMIRHAT_03460 PF00072 Response regulator receiver domain THMIRHAT_03460 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03470 PF01597 Glycine cleavage H-protein THMIRHAT_03480 PF10672 S-adenosylmethionine-dependent methyltransferase THMIRHAT_03480 PF17785 PUA-like domain THMIRHAT_03510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMIRHAT_03510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMIRHAT_03530 PF02230 Phospholipase/Carboxylesterase THMIRHAT_03580 PF02421 Ferrous iron transport protein B THMIRHAT_03580 PF07670 Nucleoside recognition THMIRHAT_03580 PF07664 Ferrous iron transport protein B C terminus THMIRHAT_03590 PF07670 Nucleoside recognition THMIRHAT_03590 PF02421 Ferrous iron transport protein B THMIRHAT_03590 PF07664 Ferrous iron transport protein B C terminus THMIRHAT_03620 PF00561 alpha/beta hydrolase fold THMIRHAT_03630 PF02325 YGGT family THMIRHAT_03640 PF03807 NADP oxidoreductase coenzyme F420-dependent THMIRHAT_03640 PF14748 Pyrroline-5-carboxylate reductase dimerisation THMIRHAT_03650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase THMIRHAT_03650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain THMIRHAT_03660 PF08447 PAS fold THMIRHAT_03660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_03670 PF12804 MobA-like NTP transferase domain THMIRHAT_03690 PF07690 Major Facilitator Superfamily THMIRHAT_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_03700 PF09308 LuxQ, periplasmic THMIRHAT_03700 PF00072 Response regulator receiver domain THMIRHAT_03700 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_03710 PF00436 Single-strand binding protein family THMIRHAT_03720 PF00999 Sodium/hydrogen exchanger family THMIRHAT_03720 PF02254 TrkA-N domain THMIRHAT_03730 PF00582 Universal stress protein family THMIRHAT_03740 PF02652 L-lactate permease THMIRHAT_03750 PF00563 EAL domain THMIRHAT_03750 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_03750 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03760 PF01339 CheB methylesterase THMIRHAT_03760 PF01739 CheR methyltransferase, SAM binding domain THMIRHAT_03760 PF03705 CheR methyltransferase, all-alpha domain THMIRHAT_03760 PF08448 PAS fold THMIRHAT_03780 PF00348 Polyprenyl synthetase THMIRHAT_03790 PF00829 Ribosomal prokaryotic L21 protein THMIRHAT_03800 PF01016 Ribosomal L27 protein THMIRHAT_03810 PF01926 50S ribosome-binding GTPase THMIRHAT_03810 PF01018 GTP1/OBG THMIRHAT_03820 PF01472 PUA domain THMIRHAT_03820 PF00696 Amino acid kinase family THMIRHAT_03830 PF00166 Chaperonin 10 Kd subunit THMIRHAT_03840 PF00118 TCP-1/cpn60 chaperonin family THMIRHAT_03850 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03850 PF07694 5TMR of 5TMR-LYT THMIRHAT_03860 PF00580 UvrD/REP helicase N-terminal domain THMIRHAT_03860 PF13361 UvrD-like helicase C-terminal domain THMIRHAT_03870 PF00072 Response regulator receiver domain THMIRHAT_03880 PF05175 Methyltransferase small domain THMIRHAT_03910 PF01142 tRNA pseudouridine synthase D (TruD) THMIRHAT_03920 PF01502 Phosphoribosyl-AMP cyclohydrolase THMIRHAT_03940 PF00877 NlpC/P60 family THMIRHAT_03960 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_03960 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_03960 PF00563 EAL domain THMIRHAT_03970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain THMIRHAT_03970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain THMIRHAT_03980 PF05166 YcgL domain THMIRHAT_04000 PF01743 Poly A polymerase head domain THMIRHAT_04000 PF12627 Probable RNA and SrmB- binding site of polymerase A THMIRHAT_04000 PF01966 HD domain THMIRHAT_04030 PF00873 AcrB/AcrD/AcrF family THMIRHAT_04040 PF00581 Rhodanese-like domain THMIRHAT_04040 PF11127 Protein of unknown function (DUF2892) THMIRHAT_04050 PF00456 Transketolase, thiamine diphosphate binding domain THMIRHAT_04050 PF02779 Transketolase, pyrimidine binding domain THMIRHAT_04050 PF02780 Transketolase, C-terminal domain THMIRHAT_04060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THMIRHAT_04060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THMIRHAT_04070 PF00162 Phosphoglycerate kinase THMIRHAT_04080 PF02887 Pyruvate kinase, alpha/beta domain THMIRHAT_04080 PF00224 Pyruvate kinase, barrel domain THMIRHAT_04090 PF01116 Fructose-bisphosphate aldolase class-II THMIRHAT_04120 PF03958 Bacterial type II/III secretion system short domain THMIRHAT_04120 PF00263 Bacterial type II and III secretion system protein THMIRHAT_04130 PF00437 Type II/IV secretion system protein THMIRHAT_04140 PF00482 Type II secretion system (T2SS), protein F THMIRHAT_04150 PF08334 Type II secretion system (T2SS), protein G THMIRHAT_04150 PF07963 Prokaryotic N-terminal methylation motif THMIRHAT_04160 PF12019 Type II transport protein GspH THMIRHAT_04160 PF07963 Prokaryotic N-terminal methylation motif THMIRHAT_04190 PF03934 Type II secretion system (T2SS), protein K THMIRHAT_04200 PF05134 Type II secretion system (T2SS), protein L THMIRHAT_04200 PF12693 GspL periplasmic domain THMIRHAT_04210 PF04612 Type II secretion system (T2SS), protein M THMIRHAT_04230 PF01483 Proprotein convertase P-domain THMIRHAT_04230 PF00082 Subtilase family THMIRHAT_04250 PF01259 SAICAR synthetase THMIRHAT_04270 PF00834 Ribulose-phosphate 3 epimerase family THMIRHAT_04280 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAT_04290 PF04715 Anthranilate synthase component I, N terminal region THMIRHAT_04290 PF00425 chorismate binding enzyme THMIRHAT_04300 PF00117 Glutamine amidotransferase class-I THMIRHAT_04310 PF02885 Glycosyl transferase family, helical bundle domain THMIRHAT_04310 PF00591 Glycosyl transferase family, a/b domain THMIRHAT_04320 PF00218 Indole-3-glycerol phosphate synthase THMIRHAT_04330 PF02675 S-adenosylmethionine decarboxylase THMIRHAT_04340 PF17284 Spermidine synthase tetramerisation domain THMIRHAT_04350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMIRHAT_04350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMIRHAT_04360 PF02566 OsmC-like protein THMIRHAT_04370 PF06968 Biotin and Thiamin Synthesis associated domain THMIRHAT_04370 PF00202 Aminotransferase class-III THMIRHAT_04370 PF04055 Radical SAM superfamily THMIRHAT_04380 PF00270 DEAD/DEAH box helicase THMIRHAT_04380 PF03880 DbpA RNA binding domain THMIRHAT_04380 PF00271 Helicase conserved C-terminal domain THMIRHAT_04390 PF00313 'Cold-shock' DNA-binding domain THMIRHAT_04400 PF00849 RNA pseudouridylate synthase THMIRHAT_04410 PF03144 Elongation factor Tu domain 2 THMIRHAT_04410 PF03143 Elongation factor Tu C-terminal domain THMIRHAT_04410 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_04420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THMIRHAT_04430 PF00467 KOW motif THMIRHAT_04430 PF02357 Transcription termination factor nusG THMIRHAT_04440 PF03946 Ribosomal protein L11, N-terminal domain THMIRHAT_04440 PF00298 Ribosomal protein L11, RNA binding domain THMIRHAT_04450 PF00687 Ribosomal protein L1p/L10e family THMIRHAT_04460 PF00466 Ribosomal protein L10 THMIRHAT_04480 PF04561 RNA polymerase Rpb2, domain 2 THMIRHAT_04480 PF04565 RNA polymerase Rpb2, domain 3 THMIRHAT_04480 PF10385 RNA polymerase beta subunit external 1 domain THMIRHAT_04480 PF00562 RNA polymerase Rpb2, domain 6 THMIRHAT_04480 PF04560 RNA polymerase Rpb2, domain 7 THMIRHAT_04480 PF04563 RNA polymerase beta subunit THMIRHAT_04490 PF04997 RNA polymerase Rpb1, domain 1 THMIRHAT_04490 PF00623 RNA polymerase Rpb1, domain 2 THMIRHAT_04490 PF04983 RNA polymerase Rpb1, domain 3 THMIRHAT_04490 PF05000 RNA polymerase Rpb1, domain 4 THMIRHAT_04490 PF04998 RNA polymerase Rpb1, domain 5 THMIRHAT_04500 PF00164 Ribosomal protein S12/S23 THMIRHAT_04510 PF00177 Ribosomal protein S7p/S5e THMIRHAT_04520 PF00679 Elongation factor G C-terminus THMIRHAT_04520 PF14492 Elongation Factor G, domain II THMIRHAT_04520 PF03144 Elongation factor Tu domain 2 THMIRHAT_04520 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_04520 PF03764 Elongation factor G, domain IV THMIRHAT_04530 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_04530 PF03144 Elongation factor Tu domain 2 THMIRHAT_04530 PF03143 Elongation factor Tu C-terminal domain THMIRHAT_04540 PF00338 Ribosomal protein S10p/S20e THMIRHAT_04550 PF00297 Ribosomal protein L3 THMIRHAT_04560 PF00573 Ribosomal protein L4/L1 family THMIRHAT_04570 PF00276 Ribosomal protein L23 THMIRHAT_04580 PF00181 Ribosomal Proteins L2, RNA binding domain THMIRHAT_04580 PF03947 Ribosomal Proteins L2, C-terminal domain THMIRHAT_04590 PF00203 Ribosomal protein S19 THMIRHAT_04600 PF00237 Ribosomal protein L22p/L17e THMIRHAT_04610 PF00189 Ribosomal protein S3, C-terminal domain THMIRHAT_04610 PF07650 KH domain THMIRHAT_04620 PF00252 Ribosomal protein L16p/L10e THMIRHAT_04630 PF00831 Ribosomal L29 protein THMIRHAT_04640 PF00366 Ribosomal protein S17 THMIRHAT_04650 PF00238 Ribosomal protein L14p/L23e THMIRHAT_04660 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THMIRHAT_04660 PF00467 KOW motif THMIRHAT_04670 PF00673 ribosomal L5P family C-terminus THMIRHAT_04670 PF00281 Ribosomal protein L5 THMIRHAT_04680 PF00253 Ribosomal protein S14p/S29e THMIRHAT_04690 PF00410 Ribosomal protein S8 THMIRHAT_04700 PF00347 Ribosomal protein L6 THMIRHAT_04710 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THMIRHAT_04720 PF03719 Ribosomal protein S5, C-terminal domain THMIRHAT_04720 PF00333 Ribosomal protein S5, N-terminal domain THMIRHAT_04730 PF00327 Ribosomal protein L30p/L7e THMIRHAT_04740 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THMIRHAT_04750 PF00344 SecY translocase THMIRHAT_04760 PF00416 Ribosomal protein S13/S18 THMIRHAT_04770 PF00411 Ribosomal protein S11 THMIRHAT_04780 PF00163 Ribosomal protein S4/S9 N-terminal domain THMIRHAT_04780 PF01479 S4 domain THMIRHAT_04790 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THMIRHAT_04790 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THMIRHAT_04790 PF01000 RNA polymerase Rpb3/RpoA insert domain THMIRHAT_04800 PF01196 Ribosomal protein L17 THMIRHAT_04830 PF00899 ThiF family THMIRHAT_04850 PF17760 UvrA interaction domain THMIRHAT_04850 PF17755 UvrA DNA-binding domain THMIRHAT_04870 PF01168 Alanine racemase, N-terminal domain THMIRHAT_04880 PF03976 Polyphosphate kinase 2 (PPK2) THMIRHAT_04910 PF01979 Amidohydrolase family THMIRHAT_04920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMIRHAT_04920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMIRHAT_04930 PF03652 Holliday junction resolvase THMIRHAT_04940 PF02622 Uncharacterized ACR, COG1678 THMIRHAT_04950 PF02424 ApbE family THMIRHAT_04960 PF16916 Dimerisation domain of Zinc Transporter THMIRHAT_04960 PF01545 Cation efflux family THMIRHAT_04980 PF03315 Serine dehydratase beta chain THMIRHAT_04980 PF03313 Serine dehydratase alpha chain THMIRHAT_04990 PF00849 RNA pseudouridylate synthase THMIRHAT_04990 PF01479 S4 domain THMIRHAT_05020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THMIRHAT_05020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THMIRHAT_05020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THMIRHAT_05030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAT_05060 PF06271 RDD family THMIRHAT_05080 PF12705 PD-(D/E)XK nuclease superfamily THMIRHAT_05080 PF00580 UvrD/REP helicase N-terminal domain THMIRHAT_05080 PF13361 UvrD-like helicase C-terminal domain THMIRHAT_05100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_05100 PF02203 Tar ligand binding domain homologue THMIRHAT_05100 PF00672 HAMP domain THMIRHAT_05120 PF02021 Uncharacterised protein family UPF0102 THMIRHAT_05140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THMIRHAT_05150 PF14743 DNA ligase OB-like domain THMIRHAT_05150 PF01068 ATP dependent DNA ligase domain THMIRHAT_05160 PF00155 Aminotransferase class I and II THMIRHAT_05170 PF02151 UvrB/uvrC motif THMIRHAT_05170 PF17757 UvrB interaction domain THMIRHAT_05170 PF12344 Ultra-violet resistance protein B THMIRHAT_05170 PF04851 Type III restriction enzyme, res subunit THMIRHAT_05170 PF00271 Helicase conserved C-terminal domain THMIRHAT_05210 PF00437 Type II/IV secretion system protein THMIRHAT_05220 PF00437 Type II/IV secretion system protein THMIRHAT_05240 PF00883 Cytosol aminopeptidase family, catalytic domain THMIRHAT_05240 PF02789 Cytosol aminopeptidase family, N-terminal domain THMIRHAT_05250 PF03739 Lipopolysaccharide export system permease LptF/LptG THMIRHAT_05260 PF03739 Lipopolysaccharide export system permease LptF/LptG THMIRHAT_05300 PF02798 Glutathione S-transferase, N-terminal domain THMIRHAT_05300 PF00043 Glutathione S-transferase, C-terminal domain THMIRHAT_05310 PF04386 Stringent starvation protein B THMIRHAT_05350 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal THMIRHAT_05350 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal THMIRHAT_05360 PF01070 FMN-dependent dehydrogenase THMIRHAT_05390 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THMIRHAT_05390 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THMIRHAT_05410 PF05230 MASE2 domain THMIRHAT_05410 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_05420 PF04452 RNA methyltransferase THMIRHAT_05430 PF02219 Methylenetetrahydrofolate reductase THMIRHAT_05440 PF02773 S-adenosylmethionine synthetase, C-terminal domain THMIRHAT_05440 PF02772 S-adenosylmethionine synthetase, central domain THMIRHAT_05440 PF00438 S-adenosylmethionine synthetase, N-terminal domain THMIRHAT_05450 PF05231 MASE1 THMIRHAT_05450 PF00563 EAL domain THMIRHAT_05460 PF00731 AIR carboxylase THMIRHAT_05470 PF02222 ATP-grasp domain THMIRHAT_05470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THMIRHAT_05480 PF03853 YjeF-related protein N-terminus THMIRHAT_05480 PF01256 Carbohydrate kinase THMIRHAT_05490 PF02673 Bacitracin resistance protein BacA THMIRHAT_05530 PF02152 Dihydroneopterin aldolase THMIRHAT_05540 PF02660 Glycerol-3-phosphate acyltransferase THMIRHAT_05550 PF00814 Glycoprotease family THMIRHAT_05560 PF01165 Ribosomal protein S21 THMIRHAT_05570 PF09424 Yqey-like protein THMIRHAT_05580 PF10410 DnaB-helicase binding domain of primase THMIRHAT_05580 PF08275 DNA primase catalytic core, N-terminal domain THMIRHAT_05580 PF13662 Toprim domain THMIRHAT_05580 PF08278 DNA primase DnaG DnaB-binding THMIRHAT_05580 PF01807 CHC2 zinc finger THMIRHAT_05590 PF04542 Sigma-70 region 2 THMIRHAT_05590 PF04545 Sigma-70, region 4 THMIRHAT_05590 PF04546 Sigma-70, non-essential region THMIRHAT_05590 PF04539 Sigma-70 region 3 THMIRHAT_05590 PF03979 Sigma-70 factor, region 1.1 THMIRHAT_05590 PF00140 Sigma-70 factor, region 1.2 THMIRHAT_05610 PF13609 Gram-negative porin THMIRHAT_05690 PF00072 Response regulator receiver domain THMIRHAT_05690 PF00158 Sigma-54 interaction domain THMIRHAT_05690 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_05700 PF00672 HAMP domain THMIRHAT_05700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_05700 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_05710 PF08334 Type II secretion system (T2SS), protein G THMIRHAT_05710 PF07963 Prokaryotic N-terminal methylation motif THMIRHAT_05720 PF03023 Lipid II flippase MurJ THMIRHAT_05730 PF06574 FAD synthetase THMIRHAT_05730 PF01687 Riboflavin kinase THMIRHAT_05760 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAT_05760 PF06827 Zinc finger found in FPG and IleRS THMIRHAT_05760 PF08264 Anticodon-binding domain of tRNA THMIRHAT_05770 PF01252 Signal peptidase (SPase) II THMIRHAT_05790 PF13406 Transglycosylase SLT domain THMIRHAT_05800 PF10672 S-adenosylmethionine-dependent methyltransferase THMIRHAT_05800 PF01170 Putative RNA methylase family UPF0020 THMIRHAT_05800 PF02926 THUMP domain THMIRHAT_05810 PF07694 5TMR of 5TMR-LYT THMIRHAT_05810 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_05830 PF04055 Radical SAM superfamily THMIRHAT_05830 PF06969 HemN C-terminal domain THMIRHAT_05850 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THMIRHAT_05860 PF01380 SIS domain THMIRHAT_05860 PF00571 CBS domain THMIRHAT_05880 PF00294 pfkB family carbohydrate kinase THMIRHAT_05880 PF01467 Cytidylyltransferase-like THMIRHAT_05890 PF13580 SIS domain THMIRHAT_05900 PF02685 Glucokinase THMIRHAT_05910 PF00483 Nucleotidyl transferase THMIRHAT_05930 PF02446 4-alpha-glucanotransferase THMIRHAT_05940 PF00128 Alpha amylase, catalytic domain THMIRHAT_05940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THMIRHAT_05940 PF02806 Alpha amylase, C-terminal all-beta domain THMIRHAT_05950 PF08323 Starch synthase catalytic domain THMIRHAT_05950 PF00534 Glycosyl transferases group 1 THMIRHAT_05960 PF00343 Carbohydrate phosphorylase THMIRHAT_05990 PF13426 PAS domain THMIRHAT_05990 PF00672 HAMP domain THMIRHAT_05990 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_06010 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_06010 PF00072 Response regulator receiver domain THMIRHAT_06020 PF08769 Sporulation initiation factor Spo0A C terminal THMIRHAT_06020 PF00072 Response regulator receiver domain THMIRHAT_06030 PF01709 Transcriptional regulator THMIRHAT_06050 PF00072 Response regulator receiver domain THMIRHAT_06050 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_06070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THMIRHAT_06070 PF02843 Phosphoribosylglycinamide synthetase, C domain THMIRHAT_06070 PF02844 Phosphoribosylglycinamide synthetase, N domain THMIRHAT_06080 PF02142 MGS-like domain THMIRHAT_06080 PF01808 AICARFT/IMPCHase bienzyme THMIRHAT_06090 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_06100 PF01207 Dihydrouridine synthase (Dus) THMIRHAT_06120 PF00289 Biotin carboxylase, N-terminal domain THMIRHAT_06120 PF02785 Biotin carboxylase C-terminal domain THMIRHAT_06120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMIRHAT_06130 PF00364 Biotin-requiring enzyme THMIRHAT_06140 PF01220 Dehydroquinase class II THMIRHAT_06150 PF11412 Disulphide bond corrector protein DsbC THMIRHAT_06150 PF02683 Cytochrome C biogenesis protein transmembrane region THMIRHAT_06160 PF04186 FxsA cytoplasmic membrane protein THMIRHAT_06200 PF11890 Domain of unknown function (DUF3410) THMIRHAT_06200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMIRHAT_06200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMIRHAT_06230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_06230 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAT_06240 PF00873 AcrB/AcrD/AcrF family THMIRHAT_06250 PF00120 Glutamine synthetase, catalytic domain THMIRHAT_06250 PF03951 Glutamine synthetase, beta-Grasp domain THMIRHAT_06270 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_06280 PF00005 ABC transporter THMIRHAT_06290 PF01895 PhoU domain THMIRHAT_06300 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_06300 PF00072 Response regulator receiver domain THMIRHAT_06310 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_06310 PF11808 Phosphate regulon sensor protein PhoR THMIRHAT_06310 PF00989 PAS fold THMIRHAT_06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_06320 PF01384 Phosphate transporter family THMIRHAT_06330 PF12849 PBP superfamily domain THMIRHAT_06340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMIRHAT_06340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMIRHAT_06350 PF00202 Aminotransferase class-III THMIRHAT_06360 PF01063 Amino-transferase class IV THMIRHAT_06380 PF03477 ATP cone domain THMIRHAT_06380 PF00317 Ribonucleotide reductase, all-alpha domain THMIRHAT_06380 PF02867 Ribonucleotide reductase, barrel domain THMIRHAT_06390 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAT_06390 PF07683 Cobalamin synthesis protein cobW C-terminal domain THMIRHAT_06400 PF00563 EAL domain THMIRHAT_06400 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_06400 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_06410 PF14376 Haem-binding domain THMIRHAT_06410 PF00034 Cytochrome c THMIRHAT_06410 PF03150 Di-haem cytochrome c peroxidase THMIRHAT_06420 PF00072 Response regulator receiver domain THMIRHAT_06420 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_06450 PF00572 Ribosomal protein L13 THMIRHAT_06460 PF00380 Ribosomal protein S9/S16 THMIRHAT_06470 PF02381 MraZ protein, putative antitoxin-like THMIRHAT_06480 PF01795 MraW methylase family THMIRHAT_06490 PF00091 Tubulin/FtsZ family, GTPase domain THMIRHAT_06490 PF12327 FtsZ family, C-terminal domain THMIRHAT_06510 PF00905 Penicillin binding protein transpeptidase domain THMIRHAT_06510 PF03717 Penicillin-binding Protein dimerisation domain THMIRHAT_06520 PF08245 Mur ligase middle domain THMIRHAT_06520 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_06520 PF01225 Mur ligase family, catalytic domain THMIRHAT_06530 PF01225 Mur ligase family, catalytic domain THMIRHAT_06530 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_06530 PF08245 Mur ligase middle domain THMIRHAT_06540 PF00953 Glycosyl transferase family 4 THMIRHAT_06550 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_06550 PF08245 Mur ligase middle domain THMIRHAT_06560 PF01098 Cell cycle protein THMIRHAT_06570 PF03033 Glycosyltransferase family 28 N-terminal domain THMIRHAT_06570 PF04101 Glycosyltransferase family 28 C-terminal domain THMIRHAT_06590 PF02743 Cache domain THMIRHAT_06590 PF00672 HAMP domain THMIRHAT_06590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_06600 PF01790 Prolipoprotein diacylglyceryl transferase THMIRHAT_06610 PF00303 Thymidylate synthase THMIRHAT_06620 PF00186 Dihydrofolate reductase THMIRHAT_06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_06630 PF02203 Tar ligand binding domain homologue THMIRHAT_06630 PF00672 HAMP domain THMIRHAT_06640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_06640 PF00672 HAMP domain THMIRHAT_06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_06640 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_06640 PF00072 Response regulator receiver domain THMIRHAT_06640 PF01627 Hpt domain THMIRHAT_06650 PF00072 Response regulator receiver domain THMIRHAT_06660 PF00950 ABC 3 transport family THMIRHAT_06670 PF00005 ABC transporter THMIRHAT_06680 PF01297 Zinc-uptake complex component A periplasmic THMIRHAT_06700 PF01458 Uncharacterized protein family (UPF0051) THMIRHAT_06710 PF00005 ABC transporter THMIRHAT_06720 PF01458 Uncharacterized protein family (UPF0051) THMIRHAT_06730 PF00266 Aminotransferase class-V THMIRHAT_06770 PF01225 Mur ligase family, catalytic domain THMIRHAT_06770 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_06770 PF08245 Mur ligase middle domain THMIRHAT_06780 PF07478 D-ala D-ala ligase C-terminus THMIRHAT_06780 PF01820 D-ala D-ala ligase N-terminus THMIRHAT_06790 PF03799 Cell division protein FtsQ THMIRHAT_06790 PF08478 POTRA domain, FtsQ-type THMIRHAT_06800 PF02491 SHS2 domain inserted in FTSA THMIRHAT_06810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase THMIRHAT_06830 PF07517 SecA DEAD-like domain THMIRHAT_06830 PF07516 SecA Wing and Scaffold domain THMIRHAT_06830 PF01043 SecA preprotein cross-linking domain THMIRHAT_06830 PF02810 SEC-C motif THMIRHAT_06840 PF01960 ArgJ family THMIRHAT_06850 PF02581 Thiamine monophosphate synthase THMIRHAT_06860 PF01121 Dephospho-CoA kinase THMIRHAT_06870 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_06870 PF00563 EAL domain THMIRHAT_06870 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_06890 PF00733 Asparagine synthase THMIRHAT_06890 PF13537 Glutamine amidotransferase domain THMIRHAT_06900 PF00462 Glutaredoxin THMIRHAT_06910 PF00929 Exonuclease THMIRHAT_06920 PF00696 Amino acid kinase family THMIRHAT_06920 PF00583 Acetyltransferase (GNAT) family THMIRHAT_06930 PF00920 Dehydratase family THMIRHAT_06990 PF01435 Peptidase family M48 THMIRHAT_06990 PF13181 Tetratricopeptide repeat THMIRHAT_07000 PF01206 Sulfurtransferase TusA THMIRHAT_07010 PF13686 DsrE/DsrF/DrsH-like family THMIRHAT_07020 PF00483 Nucleotidyl transferase THMIRHAT_07030 PF00342 Phosphoglucose isomerase THMIRHAT_07040 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THMIRHAT_07040 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THMIRHAT_07040 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THMIRHAT_07050 PF01066 CDP-alcohol phosphatidyltransferase THMIRHAT_07060 PF00682 HMGL-like THMIRHAT_07060 PF08502 LeuA allosteric (dimerisation) domain THMIRHAT_07080 PF00583 Acetyltransferase (GNAT) family THMIRHAT_07090 PF01037 Lrp/AsnC ligand binding domain THMIRHAT_07100 PF00682 HMGL-like THMIRHAT_07100 PF08502 LeuA allosteric (dimerisation) domain THMIRHAT_07110 PF00459 Inositol monophosphatase family THMIRHAT_07120 PF00588 SpoU rRNA Methylase family THMIRHAT_07130 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_07140 PF02082 Transcriptional regulator THMIRHAT_07150 PF01521 Iron-sulphur cluster biosynthesis THMIRHAT_07160 PF00334 Nucleoside diphosphate kinase THMIRHAT_07170 PF04055 Radical SAM superfamily THMIRHAT_07190 PF03129 Anticodon binding domain THMIRHAT_07190 PF13393 Histidyl-tRNA synthetase THMIRHAT_07210 PF01011 PQQ enzyme repeat THMIRHAT_07210 PF13360 PQQ-like domain THMIRHAT_07220 PF01926 50S ribosome-binding GTPase THMIRHAT_07220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THMIRHAT_07260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THMIRHAT_07270 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAT_07270 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_07270 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAT_07400 PF07715 TonB-dependent Receptor Plug Domain THMIRHAT_07400 PF00593 TonB dependent receptor THMIRHAT_07420 PF01966 HD domain THMIRHAT_07420 PF00013 KH domain THMIRHAT_07420 PF12072 Domain of unknown function (DUF3552) THMIRHAT_07430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAT_07430 PF03129 Anticodon binding domain THMIRHAT_07430 PF02824 TGS domain THMIRHAT_07430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMIRHAT_07440 PF05198 Translation initiation factor IF-3, N-terminal domain THMIRHAT_07440 PF00707 Translation initiation factor IF-3, C-terminal domain THMIRHAT_07450 PF01632 Ribosomal protein L35 THMIRHAT_07460 PF00453 Ribosomal protein L20 THMIRHAT_07470 PF01409 tRNA synthetases class II core domain (F) THMIRHAT_07470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THMIRHAT_07480 PF03483 B3/4 domain THMIRHAT_07480 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THMIRHAT_07480 PF01588 Putative tRNA binding domain THMIRHAT_07480 PF03484 tRNA synthetase B5 domain THMIRHAT_07480 PF03147 Ferredoxin-fold anticodon binding domain THMIRHAT_07490 PF00216 Bacterial DNA-binding protein THMIRHAT_07530 PF00149 Calcineurin-like phosphoesterase THMIRHAT_07540 PF00398 Ribosomal RNA adenine dimethylase THMIRHAT_07550 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THMIRHAT_07560 PF09312 SurA N-terminal domain THMIRHAT_07560 PF00639 PPIC-type PPIASE domain THMIRHAT_07570 PF04453 LPS transport system D THMIRHAT_07580 PF01636 Phosphotransferase enzyme family THMIRHAT_07590 PF00483 Nucleotidyl transferase THMIRHAT_07610 PF03883 Peroxide stress protein YaaA THMIRHAT_07620 PF01430 Hsp33 protein THMIRHAT_07630 PF04055 Radical SAM superfamily THMIRHAT_07630 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family THMIRHAT_07640 PF03099 Biotin/lipoate A/B protein ligase family THMIRHAT_07650 PF04359 Protein of unknown function (DUF493) THMIRHAT_07660 PF01063 Amino-transferase class IV THMIRHAT_07670 PF07943 Penicillin-binding protein 5, C-terminal domain THMIRHAT_07670 PF00768 D-alanyl-D-alanine carboxypeptidase THMIRHAT_07680 PF01098 Cell cycle protein THMIRHAT_07690 PF03717 Penicillin-binding Protein dimerisation domain THMIRHAT_07690 PF00905 Penicillin binding protein transpeptidase domain THMIRHAT_07710 PF04085 rod shape-determining protein MreC THMIRHAT_07730 PF02686 Glu-tRNAGln amidotransferase C subunit THMIRHAT_07740 PF01425 Amidase THMIRHAT_07750 PF02934 GatB/GatE catalytic domain THMIRHAT_07750 PF02637 GatB domain THMIRHAT_07760 PF04241 Protein of unknown function (DUF423) THMIRHAT_07770 PF01435 Peptidase family M48 THMIRHAT_07780 PF02657 Fe-S metabolism associated domain THMIRHAT_07790 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_07840 PF00571 CBS domain THMIRHAT_07840 PF00478 IMP dehydrogenase / GMP reductase domain THMIRHAT_07850 PF02540 NAD synthase THMIRHAT_07850 PF00958 GMP synthase C terminal domain THMIRHAT_07850 PF00117 Glutamine amidotransferase class-I THMIRHAT_07890 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAT_07890 PF00589 Phage integrase family THMIRHAT_07900 PF01527 Transposase THMIRHAT_07910 PF13276 HTH-like domain THMIRHAT_07910 PF13333 Integrase core domain THMIRHAT_07910 PF00665 Integrase core domain THMIRHAT_07920 PF00665 Integrase core domain THMIRHAT_07920 PF13333 Integrase core domain THMIRHAT_07920 PF13276 HTH-like domain THMIRHAT_07980 PF14437 MafB19-like deaminase THMIRHAT_07990 PF03975 CheD chemotactic sensory transduction THMIRHAT_08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_08000 PF01627 Hpt domain THMIRHAT_08000 PF01584 CheW-like domain THMIRHAT_08000 PF02895 Signal transducing histidine kinase, homodimeric domain THMIRHAT_08030 PF00183 Hsp90 protein THMIRHAT_08080 PF01584 CheW-like domain THMIRHAT_08080 PF00072 Response regulator receiver domain THMIRHAT_08100 PF00460 Flagella basal body rod protein THMIRHAT_08110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAT_08110 PF00460 Flagella basal body rod protein THMIRHAT_08120 PF03963 Flagellar hook capping protein - N-terminal region THMIRHAT_08130 PF07559 Flagellar basal body protein FlaE THMIRHAT_08130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAT_08130 PF07196 Flagellin hook IN motif THMIRHAT_08130 PF00460 Flagella basal body rod protein THMIRHAT_08140 PF00460 Flagella basal body rod protein THMIRHAT_08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAT_08150 PF00460 Flagella basal body rod protein THMIRHAT_08150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAT_08160 PF02107 Flagellar L-ring protein THMIRHAT_08180 PF02119 Flagellar P-ring protein THMIRHAT_08190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THMIRHAT_08190 PF10135 Rod binding protein THMIRHAT_08210 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_08210 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_08210 PF00460 Flagella basal body rod protein THMIRHAT_08220 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain THMIRHAT_08220 PF01464 Transglycosylase SLT domain THMIRHAT_08240 PF01527 Transposase THMIRHAT_08250 PF13276 HTH-like domain THMIRHAT_08250 PF00665 Integrase core domain THMIRHAT_08250 PF13333 Integrase core domain THMIRHAT_08260 PF00665 Integrase core domain THMIRHAT_08260 PF13333 Integrase core domain THMIRHAT_08260 PF13276 HTH-like domain THMIRHAT_08270 PF02719 Polysaccharide biosynthesis protein THMIRHAT_08280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMIRHAT_08290 PF08011 PD-(D/E)XK nuclease superfamily THMIRHAT_08290 PF09820 Predicted AAA-ATPase THMIRHAT_08310 PF02348 Cytidylyltransferase THMIRHAT_08370 PF00501 AMP-binding enzyme THMIRHAT_08370 PF13193 AMP-binding enzyme C-terminal domain THMIRHAT_08380 PF08666 SAF domain THMIRHAT_08380 PF03102 NeuB family THMIRHAT_08390 PF01467 Cytidylyltransferase-like THMIRHAT_08400 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase THMIRHAT_08410 PF00483 Nucleotidyl transferase THMIRHAT_08420 PF05523 WxcM-like, C-terminal THMIRHAT_08430 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_08460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMIRHAT_08480 PF03050 Transposase IS66 family THMIRHAT_08480 PF13007 Transposase C of IS166 homeodomain THMIRHAT_08480 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAT_08480 PF13817 IS66 C-terminal element THMIRHAT_08500 PF00872 Transposase, Mutator family THMIRHAT_08520 PF01943 Polysaccharide biosynthesis protein THMIRHAT_08540 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THMIRHAT_08540 PF00391 PEP-utilising enzyme, mobile domain THMIRHAT_08550 PF07722 Peptidase C26 THMIRHAT_08570 PF00483 Nucleotidyl transferase THMIRHAT_08610 PF00535 Glycosyl transferase family 2 THMIRHAT_08620 PF01527 Transposase THMIRHAT_08650 PF01973 Protein of unknown function DUF115 THMIRHAT_08660 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_08660 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_08670 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_08670 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_08680 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_08680 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_08690 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_08690 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_08700 PF03646 FlaG protein THMIRHAT_08710 PF07195 Flagellar hook-associated protein 2 C-terminus THMIRHAT_08710 PF02465 Flagellar hook-associated protein 2 N-terminus THMIRHAT_08710 PF07196 Flagellin hook IN motif THMIRHAT_08720 PF02561 Flagellar protein FliS THMIRHAT_08740 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_08740 PF06490 Flagellar regulatory protein FleQ THMIRHAT_08740 PF00158 Sigma-54 interaction domain THMIRHAT_08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_08750 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_08750 PF00989 PAS fold THMIRHAT_08760 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_08760 PF00158 Sigma-54 interaction domain THMIRHAT_08760 PF00072 Response regulator receiver domain THMIRHAT_08770 PF02049 Flagellar hook-basal body complex protein FliE THMIRHAT_08780 PF08345 Flagellar M-ring protein C-terminal THMIRHAT_08780 PF01514 Secretory protein of YscJ/FliF family THMIRHAT_08790 PF14841 FliG middle domain THMIRHAT_08790 PF14842 FliG N-terminal domain THMIRHAT_08790 PF01706 FliG C-terminal domain THMIRHAT_08810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAT_08810 PF18269 T3SS EscN ATPase C-terminal domain THMIRHAT_08840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_08840 PF00672 HAMP domain THMIRHAT_08850 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_08860 PF00691 OmpA family THMIRHAT_08860 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAT_08880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMIRHAT_08880 PF02154 Flagellar motor switch protein FliM THMIRHAT_08890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMIRHAT_08900 PF04347 Flagellar biosynthesis protein, FliO THMIRHAT_08910 PF00813 FliP family THMIRHAT_08920 PF01313 Bacterial export proteins, family 3 THMIRHAT_08930 PF01311 Bacterial export proteins, family 1 THMIRHAT_08940 PF01312 FlhB HrpN YscU SpaS Family THMIRHAT_08950 PF00771 FHIPEP family THMIRHAT_08960 PF00448 SRP54-type protein, GTPase domain THMIRHAT_08970 PF10609 NUBPL iron-transfer P-loop NTPase THMIRHAT_08980 PF04542 Sigma-70 region 2 THMIRHAT_08980 PF04539 Sigma-70 region 3 THMIRHAT_08980 PF04545 Sigma-70, region 4 THMIRHAT_08990 PF00072 Response regulator receiver domain THMIRHAT_09000 PF04344 Chemotaxis phosphatase, CheZ THMIRHAT_09010 PF01627 Hpt domain THMIRHAT_09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_09010 PF00072 Response regulator receiver domain THMIRHAT_09010 PF02895 Signal transducing histidine kinase, homodimeric domain THMIRHAT_09010 PF01584 CheW-like domain THMIRHAT_09020 PF01584 CheW-like domain THMIRHAT_09030 PF09285 Elongation factor P, C-terminal THMIRHAT_09030 PF01132 Elongation factor P (EF-P) OB domain THMIRHAT_09030 PF08207 Elongation factor P (EF-P) KOW-like domain THMIRHAT_09060 PF01370 NAD dependent epimerase/dehydratase family THMIRHAT_09060 PF08338 Domain of unknown function (DUF1731) THMIRHAT_09070 PF00875 DNA photolyase THMIRHAT_09070 PF03441 FAD binding domain of DNA photolyase THMIRHAT_09120 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region THMIRHAT_09120 PF01243 Pyridoxamine 5'-phosphate oxidase THMIRHAT_09150 PF00578 AhpC/TSA family THMIRHAT_09160 PF13426 PAS domain THMIRHAT_09160 PF01740 STAS domain THMIRHAT_09170 PF13411 MerR HTH family regulatory protein THMIRHAT_09180 PF00875 DNA photolyase THMIRHAT_09180 PF03441 FAD binding domain of DNA photolyase THMIRHAT_09230 PF01266 FAD dependent oxidoreductase THMIRHAT_09280 PF01625 Peptide methionine sulfoxide reductase THMIRHAT_09310 PF00085 Thioredoxin THMIRHAT_09320 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_09320 PF00072 Response regulator receiver domain THMIRHAT_09330 PF05190 MutS family domain IV THMIRHAT_09330 PF00488 MutS domain V THMIRHAT_09330 PF01624 MutS domain I THMIRHAT_09330 PF05188 MutS domain II THMIRHAT_09330 PF05192 MutS domain III THMIRHAT_09340 PF13426 PAS domain THMIRHAT_09340 PF08447 PAS fold THMIRHAT_09340 PF07536 HWE histidine kinase THMIRHAT_09370 PF03788 LrgA family THMIRHAT_09380 PF04172 LrgB-like family THMIRHAT_09390 PF00365 Phosphofructokinase THMIRHAT_09400 PF00570 HRDC domain THMIRHAT_09400 PF01612 3'-5' exonuclease THMIRHAT_09410 PF01225 Mur ligase family, catalytic domain THMIRHAT_09410 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_09410 PF08245 Mur ligase middle domain THMIRHAT_09430 PF02547 Queuosine biosynthesis protein THMIRHAT_09440 PF01702 Queuine tRNA-ribosyltransferase THMIRHAT_09450 PF02699 Preprotein translocase subunit THMIRHAT_09460 PF02355 Protein export membrane protein THMIRHAT_09460 PF13721 SecD export protein N-terminal TM region THMIRHAT_09460 PF07549 SecD/SecF GG Motif THMIRHAT_09470 PF07549 SecD/SecF GG Motif THMIRHAT_09470 PF02355 Protein export membrane protein THMIRHAT_09480 PF03144 Elongation factor Tu domain 2 THMIRHAT_09480 PF16658 Class II release factor RF3, C-terminal domain THMIRHAT_09480 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_09490 PF00924 Mechanosensitive ion channel THMIRHAT_09490 PF05552 Conserved TM helix THMIRHAT_09510 PF01769 Divalent cation transporter THMIRHAT_09510 PF03448 MgtE intracellular N domain THMIRHAT_09510 PF00571 CBS domain THMIRHAT_09520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THMIRHAT_09530 PF12399 Branched-chain amino acid ATP-binding cassette transporter THMIRHAT_09530 PF00005 ABC transporter THMIRHAT_09570 PF01699 Sodium/calcium exchanger protein THMIRHAT_09590 PF00005 ABC transporter THMIRHAT_09600 PF02405 Permease MlaE THMIRHAT_09610 PF02470 MlaD protein THMIRHAT_09640 PF00005 ABC transporter THMIRHAT_09650 PF01061 ABC-2 type transporter THMIRHAT_09670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMIRHAT_09680 PF01634 ATP phosphoribosyltransferase THMIRHAT_09690 PF00815 Histidinol dehydrogenase THMIRHAT_09700 PF01784 NIF3 (NGG1p interacting factor 3) THMIRHAT_09710 PF00355 Rieske [2Fe-2S] domain THMIRHAT_09710 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal THMIRHAT_09720 PF00032 Cytochrome b(C-terminal)/b6/petD THMIRHAT_09720 PF00033 Cytochrome b/b6/petB THMIRHAT_09730 PF02167 Cytochrome C1 family THMIRHAT_09740 PF18073 Rubredoxin metal binding domain THMIRHAT_09750 PF00072 Response regulator receiver domain THMIRHAT_09750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_09750 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_09750 PF18415 Histidine kinase receptor ArcB trans-membrane domain THMIRHAT_09750 PF01627 Hpt domain THMIRHAT_09750 PF00989 PAS fold THMIRHAT_09760 PF00459 Inositol monophosphatase family THMIRHAT_09770 PF00571 CBS domain THMIRHAT_09770 PF01595 Cyclin M transmembrane N-terminal domain THMIRHAT_09770 PF03471 Transporter associated domain THMIRHAT_09800 PF02978 Signal peptide binding domain THMIRHAT_09800 PF02881 SRP54-type protein, helical bundle domain THMIRHAT_09800 PF00448 SRP54-type protein, GTPase domain THMIRHAT_09820 PF00293 NUDIX domain THMIRHAT_09830 PF00456 Transketolase, thiamine diphosphate binding domain THMIRHAT_09830 PF17831 Pyruvate dehydrogenase E1 component middle domain THMIRHAT_09840 PF02817 e3 binding domain THMIRHAT_09840 PF00364 Biotin-requiring enzyme THMIRHAT_09840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THMIRHAT_09850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAT_09850 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_09870 PF00270 DEAD/DEAH box helicase THMIRHAT_09870 PF00271 Helicase conserved C-terminal domain THMIRHAT_09890 PF11953 Domain of unknown function (DUF3470) THMIRHAT_09890 PF00037 4Fe-4S binding domain THMIRHAT_09900 PF00271 Helicase conserved C-terminal domain THMIRHAT_09900 PF00270 DEAD/DEAH box helicase THMIRHAT_09920 PF00563 EAL domain THMIRHAT_09920 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_09920 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_09930 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_09950 PF00849 RNA pseudouridylate synthase THMIRHAT_09990 PF04193 PQ loop repeat THMIRHAT_10000 PF01810 LysE type translocator THMIRHAT_10010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THMIRHAT_10030 PF01980 tRNA-methyltransferase O THMIRHAT_10030 PF18389 TrmO C-terminal domain THMIRHAT_10050 PF02678 Pirin THMIRHAT_10050 PF05726 Pirin C-terminal cupin domain THMIRHAT_10060 PF03466 LysR substrate binding domain THMIRHAT_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_10090 PF09285 Elongation factor P, C-terminal THMIRHAT_10090 PF08207 Elongation factor P (EF-P) KOW-like domain THMIRHAT_10090 PF01132 Elongation factor P (EF-P) OB domain THMIRHAT_10100 PF00149 Calcineurin-like phosphoesterase THMIRHAT_10100 PF12320 Type 5 capsule protein repressor C-terminal domain THMIRHAT_10110 PF13476 AAA domain THMIRHAT_10190 PF00563 EAL domain THMIRHAT_10190 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_10190 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_10200 PF12848 ABC transporter THMIRHAT_10200 PF00005 ABC transporter THMIRHAT_10210 PF00464 Serine hydroxymethyltransferase THMIRHAT_10220 PF03477 ATP cone domain THMIRHAT_10230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMIRHAT_10230 PF01872 RibD C-terminal domain THMIRHAT_10240 PF00677 Lumazine binding domain THMIRHAT_10250 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THMIRHAT_10250 PF00925 GTP cyclohydrolase II THMIRHAT_10260 PF00885 6,7-dimethyl-8-ribityllumazine synthase THMIRHAT_10270 PF01029 NusB family THMIRHAT_10280 PF00586 AIR synthase related protein, N-terminal domain THMIRHAT_10280 PF02769 AIR synthase related protein, C-terminal domain THMIRHAT_10290 PF00793 DAHP synthetase I family THMIRHAT_10310 PF06750 Bacterial Peptidase A24 N-terminal domain THMIRHAT_10310 PF01478 Type IV leader peptidase family THMIRHAT_10330 PF01242 6-pyruvoyl tetrahydropterin synthase THMIRHAT_10340 PF00348 Polyprenyl synthetase THMIRHAT_10350 PF00578 AhpC/TSA family THMIRHAT_10350 PF10417 C-terminal domain of 1-Cys peroxiredoxin THMIRHAT_10380 PF00085 Thioredoxin THMIRHAT_10390 PF00206 Lyase THMIRHAT_10390 PF10415 Fumarase C C-terminus THMIRHAT_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_10400 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_10400 PF09308 LuxQ, periplasmic THMIRHAT_10400 PF00072 Response regulator receiver domain THMIRHAT_10410 PF00196 Bacterial regulatory proteins, luxR family THMIRHAT_10410 PF00072 Response regulator receiver domain THMIRHAT_10430 PF03449 Transcription elongation factor, N-terminal THMIRHAT_10430 PF01272 Transcription elongation factor, GreA/GreB, C-term THMIRHAT_10470 PF00072 Response regulator receiver domain THMIRHAT_10480 PF01584 CheW-like domain THMIRHAT_10500 PF01739 CheR methyltransferase, SAM binding domain THMIRHAT_10500 PF03705 CheR methyltransferase, all-alpha domain THMIRHAT_10510 PF01339 CheB methylesterase THMIRHAT_10510 PF00072 Response regulator receiver domain THMIRHAT_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_10520 PF02743 Cache domain THMIRHAT_10520 PF00672 HAMP domain THMIRHAT_10550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_10550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase THMIRHAT_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_10570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE THMIRHAT_10570 PF17854 FtsK alpha domain THMIRHAT_10570 PF01580 FtsK/SpoIIIE family THMIRHAT_10570 PF09397 Ftsk gamma domain THMIRHAT_10580 PF03548 Outer membrane lipoprotein carrier protein LolA THMIRHAT_10590 PF12002 MgsA AAA+ ATPase C terminal THMIRHAT_10590 PF16193 AAA C-terminal domain THMIRHAT_10590 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_10600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THMIRHAT_10610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAT_10610 PF02403 Seryl-tRNA synthetase N-terminal domain THMIRHAT_10630 PF02464 Competence-damaged protein THMIRHAT_10640 PF00154 recA bacterial DNA recombination protein THMIRHAT_10660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMIRHAT_10660 PF01411 tRNA synthetases class II (A) THMIRHAT_10660 PF02272 DHHA1 domain THMIRHAT_10670 PF00696 Amino acid kinase family THMIRHAT_10670 PF01842 ACT domain THMIRHAT_10670 PF13840 ACT domain THMIRHAT_10680 PF02599 Global regulator protein family THMIRHAT_10690 PF01758 Sodium Bile acid symporter family THMIRHAT_10700 PF00106 short chain dehydrogenase THMIRHAT_10730 PF00849 RNA pseudouridylate synthase THMIRHAT_10740 PF03692 Putative zinc- or iron-chelating domain THMIRHAT_10760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THMIRHAT_10760 PF00384 Molybdopterin oxidoreductase THMIRHAT_10760 PF01568 Molydopterin dinucleotide binding domain THMIRHAT_10760 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAT_10770 PF13247 4Fe-4S dicluster domain THMIRHAT_10830 PF10609 NUBPL iron-transfer P-loop NTPase THMIRHAT_10850 PF00563 EAL domain THMIRHAT_10850 PF08668 HDOD domain THMIRHAT_10900 PF00873 AcrB/AcrD/AcrF family THMIRHAT_10910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_10950 PF00072 Response regulator receiver domain THMIRHAT_10960 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_10960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_10970 PF00672 HAMP domain THMIRHAT_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_10970 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_10980 PF00072 Response regulator receiver domain THMIRHAT_10980 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_10990 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_11010 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_11010 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_11010 PF00563 EAL domain THMIRHAT_11030 PF02472 Biopolymer transport protein ExbD/TolR THMIRHAT_11040 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_11060 PF00919 Uncharacterized protein family UPF0004 THMIRHAT_11060 PF04055 Radical SAM superfamily THMIRHAT_11060 PF18693 TRAM domain THMIRHAT_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_11110 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAT_11110 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAT_11140 PF02896 PEP-utilising enzyme, TIM barrel domain THMIRHAT_11140 PF00391 PEP-utilising enzyme, mobile domain THMIRHAT_11140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THMIRHAT_11150 PF00689 Cation transporting ATPase, C-terminus THMIRHAT_11150 PF00690 Cation transporter/ATPase, N-terminus THMIRHAT_11160 PF00578 AhpC/TSA family THMIRHAT_11200 PF10576 Iron-sulfur binding domain of endonuclease III THMIRHAT_11200 PF00633 Helix-hairpin-helix motif THMIRHAT_11200 PF00730 HhH-GPD superfamily base excision DNA repair protein THMIRHAT_11210 PF02508 Rnf-Nqr subunit, membrane protein THMIRHAT_11220 PF04205 FMN-binding domain THMIRHAT_11230 PF03116 NQR2, RnfD, RnfE family THMIRHAT_11240 PF10531 SLBB domain THMIRHAT_11240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMIRHAT_11240 PF13375 RnfC Barrel sandwich hybrid domain THMIRHAT_11240 PF12838 4Fe-4S dicluster domain THMIRHAT_11250 PF04060 Putative Fe-S cluster THMIRHAT_11260 PF02508 Rnf-Nqr subunit, membrane protein THMIRHAT_11270 PF09334 tRNA synthetases class I (M) THMIRHAT_11270 PF01588 Putative tRNA binding domain THMIRHAT_11280 PF13466 STAS domain THMIRHAT_11290 PF13525 Outer membrane lipoprotein THMIRHAT_11300 PF01479 S4 domain THMIRHAT_11300 PF00849 RNA pseudouridylate synthase THMIRHAT_11320 PF10609 NUBPL iron-transfer P-loop NTPase THMIRHAT_11330 PF00692 dUTPase THMIRHAT_11350 PF00551 Formyl transferase THMIRHAT_11360 PF02769 AIR synthase related protein, C-terminal domain THMIRHAT_11360 PF00586 AIR synthase related protein, N-terminal domain THMIRHAT_11380 PF00308 Bacterial dnaA protein THMIRHAT_11390 PF08534 Redoxin THMIRHAT_11460 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ THMIRHAT_11470 PF01926 50S ribosome-binding GTPase THMIRHAT_11500 PF01235 Sodium:alanine symporter family THMIRHAT_11520 PF00639 PPIC-type PPIASE domain THMIRHAT_11520 PF09312 SurA N-terminal domain THMIRHAT_11560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_11560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase THMIRHAT_11570 PF00717 Peptidase S24-like THMIRHAT_11580 PF11799 impB/mucB/samB family C-terminal domain THMIRHAT_11580 PF13438 Domain of unknown function (DUF4113) THMIRHAT_11580 PF00817 impB/mucB/samB family THMIRHAT_11580 PF11798 IMS family HHH motif THMIRHAT_11590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAT_11590 PF04073 Aminoacyl-tRNA editing domain THMIRHAT_11590 PF03129 Anticodon binding domain THMIRHAT_11600 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_11600 PF00563 EAL domain THMIRHAT_11600 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_11620 PF13286 Phosphohydrolase-associated domain THMIRHAT_11620 PF01966 HD domain THMIRHAT_11630 PF00202 Aminotransferase class-III THMIRHAT_11650 PF00578 AhpC/TSA family THMIRHAT_11660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) THMIRHAT_11690 PF02630 SCO1/SenC THMIRHAT_11700 PF00585 C-terminal regulatory domain of Threonine dehydratase THMIRHAT_11700 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAT_11710 PF01812 5-formyltetrahydrofolate cyclo-ligase family THMIRHAT_11740 PF05195 Aminopeptidase P, N-terminal domain THMIRHAT_11740 PF00557 Metallopeptidase family M24 THMIRHAT_11750 PF01494 FAD binding domain THMIRHAT_11760 PF01494 FAD binding domain THMIRHAT_11770 PF07885 Ion channel THMIRHAT_11770 PF02254 TrkA-N domain THMIRHAT_11780 PF03466 LysR substrate binding domain THMIRHAT_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_11790 PF13638 PIN domain THMIRHAT_11790 PF02562 PhoH-like protein THMIRHAT_11800 PF00578 AhpC/TSA family THMIRHAT_11810 PF00701 Dihydrodipicolinate synthetase family THMIRHAT_11830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THMIRHAT_11830 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal THMIRHAT_11830 PF02769 AIR synthase related protein, C-terminal domain THMIRHAT_11860 PF00248 Aldo/keto reductase family THMIRHAT_11910 PF02685 Glucokinase THMIRHAT_11930 PF05973 Phage derived protein Gp49-like (DUF891) THMIRHAT_11980 PF01590 GAF domain THMIRHAT_11980 PF00158 Sigma-54 interaction domain THMIRHAT_12000 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_12010 PF00005 ABC transporter THMIRHAT_12020 PF02560 Cyanate lyase C-terminal domain THMIRHAT_12050 PF08448 PAS fold THMIRHAT_12050 PF13188 PAS domain THMIRHAT_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_12050 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_12050 PF00072 Response regulator receiver domain THMIRHAT_12060 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_12060 PF00563 EAL domain THMIRHAT_12060 PF13426 PAS domain THMIRHAT_12070 PF17770 Ribonuclease J C-terminal domain THMIRHAT_12070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain THMIRHAT_12070 PF12706 Beta-lactamase superfamily domain THMIRHAT_12090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THMIRHAT_12090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THMIRHAT_12110 PF00472 RF-1 domain THMIRHAT_12110 PF03462 PCRF domain THMIRHAT_12120 PF00152 tRNA synthetases class II (D, K and N) THMIRHAT_12120 PF01336 OB-fold nucleic acid binding domain THMIRHAT_12130 PF01571 Aminomethyltransferase folate-binding domain THMIRHAT_12140 PF01584 CheW-like domain THMIRHAT_12150 PF02910 Fumarate reductase flavoprotein C-term THMIRHAT_12150 PF00890 FAD binding domain THMIRHAT_12170 PF17820 PDZ domain THMIRHAT_12170 PF13180 PDZ domain THMIRHAT_12180 PF06421 GTP-binding protein LepA C-terminus THMIRHAT_12180 PF00679 Elongation factor G C-terminus THMIRHAT_12180 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_12180 PF03144 Elongation factor Tu domain 2 THMIRHAT_12190 PF10502 Signal peptidase, peptidase S26 THMIRHAT_12200 PF00035 Double-stranded RNA binding motif THMIRHAT_12200 PF14622 Ribonuclease-III-like THMIRHAT_12210 PF01926 50S ribosome-binding GTPase THMIRHAT_12210 PF07650 KH domain THMIRHAT_12220 PF11967 Recombination protein O N terminal THMIRHAT_12220 PF02565 Recombination protein O C terminal THMIRHAT_12230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ THMIRHAT_12240 PF01648 4'-phosphopantetheinyl transferase superfamily THMIRHAT_12310 PF17158 Membrane-associated sensor, integral membrane domain THMIRHAT_12310 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_12320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_12340 PF08442 ATP-grasp domain THMIRHAT_12340 PF00549 CoA-ligase THMIRHAT_12350 PF02629 CoA binding domain THMIRHAT_12350 PF00549 CoA-ligase THMIRHAT_12360 PF00795 Carbon-nitrogen hydrolase THMIRHAT_12360 PF02540 NAD synthase THMIRHAT_12370 PF02080 TrkA-C domain THMIRHAT_12370 PF02254 TrkA-N domain THMIRHAT_12370 PF00999 Sodium/hydrogen exchanger family THMIRHAT_12380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THMIRHAT_12380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THMIRHAT_12390 PF01510 N-acetylmuramoyl-L-alanine amidase THMIRHAT_12400 PF00258 Flavodoxin THMIRHAT_12410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THMIRHAT_12420 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system THMIRHAT_12430 PF00270 DEAD/DEAH box helicase THMIRHAT_12430 PF08482 ATP-dependent helicase C-terminal THMIRHAT_12430 PF00271 Helicase conserved C-terminal domain THMIRHAT_12430 PF04408 Helicase associated domain (HA2) THMIRHAT_12470 PF01176 Translation initiation factor 1A / IF-1 THMIRHAT_12480 PF03588 Leucyl/phenylalanyl-tRNA protein transferase THMIRHAT_12490 PF01336 OB-fold nucleic acid binding domain THMIRHAT_12490 PF02811 PHP domain THMIRHAT_12490 PF14579 Helix-hairpin-helix motif THMIRHAT_12490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMIRHAT_12490 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMIRHAT_12500 PF03734 L,D-transpeptidase catalytic domain THMIRHAT_12500 PF01476 LysM domain THMIRHAT_12510 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_12540 PF00933 Glycosyl hydrolase family 3 N terminal domain THMIRHAT_12550 PF00924 Mechanosensitive ion channel THMIRHAT_12560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THMIRHAT_12560 PF01565 FAD binding domain THMIRHAT_12570 PF00209 Sodium:neurotransmitter symporter family THMIRHAT_12600 PF07687 Peptidase dimerisation domain THMIRHAT_12600 PF01546 Peptidase family M20/M25/M40 THMIRHAT_12610 PF03960 ArsC family THMIRHAT_12620 PF14602 Hexapeptide repeat of succinyl-transferase THMIRHAT_12620 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle THMIRHAT_12630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily THMIRHAT_12680 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_12680 PF08448 PAS fold THMIRHAT_12700 PF00293 NUDIX domain THMIRHAT_12710 PF01844 HNH endonuclease THMIRHAT_12720 PF00565 Staphylococcal nuclease homologue THMIRHAT_12810 PF00589 Phage integrase family THMIRHAT_12810 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAT_12820 PF01066 CDP-alcohol phosphatidyltransferase THMIRHAT_12830 PF02151 UvrB/uvrC motif THMIRHAT_12830 PF12826 Helix-hairpin-helix motif THMIRHAT_12830 PF01541 GIY-YIG catalytic domain THMIRHAT_12830 PF08459 UvrC Helix-hairpin-helix N-terminal THMIRHAT_12840 PF01343 Peptidase family S49 THMIRHAT_12860 PF02559 CarD-like/TRCF domain THMIRHAT_12860 PF00271 Helicase conserved C-terminal domain THMIRHAT_12860 PF03461 TRCF domain THMIRHAT_12860 PF17757 UvrB interaction domain THMIRHAT_12860 PF00270 DEAD/DEAH box helicase THMIRHAT_12880 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_12890 PF03458 UPF0126 domain THMIRHAT_12900 PF12704 MacB-like periplasmic core domain THMIRHAT_12900 PF02687 FtsX-like permease family THMIRHAT_12910 PF00005 ABC transporter THMIRHAT_12920 PF12848 ABC transporter THMIRHAT_12920 PF00005 ABC transporter THMIRHAT_12930 PF00581 Rhodanese-like domain THMIRHAT_12930 PF11127 Protein of unknown function (DUF2892) THMIRHAT_12940 PF05698 Bacterial trigger factor protein (TF) C-terminus THMIRHAT_12940 PF05697 Bacterial trigger factor protein (TF) THMIRHAT_12940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_12950 PF00574 Clp protease THMIRHAT_12960 PF07724 AAA domain (Cdc48 subfamily) THMIRHAT_12960 PF06689 ClpX C4-type zinc finger THMIRHAT_12960 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAT_12970 PF02190 ATP-dependent protease La (LON) substrate-binding domain THMIRHAT_12970 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_12970 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAT_12980 PF00216 Bacterial DNA-binding protein THMIRHAT_13000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMIRHAT_13010 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_13020 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_13020 PF12911 N-terminal TM domain of oligopeptide transport permease C THMIRHAT_13030 PF00005 ABC transporter THMIRHAT_13030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMIRHAT_13040 PF01541 GIY-YIG catalytic domain THMIRHAT_13060 PF01207 Dihydrouridine synthase (Dus) THMIRHAT_13070 PF13742 OB-fold nucleic acid binding domain THMIRHAT_13070 PF02601 Exonuclease VII, large subunit THMIRHAT_13090 PF03960 ArsC family THMIRHAT_13120 PF00309 Sigma-54 factor, Activator interacting domain (AID) THMIRHAT_13120 PF04552 Sigma-54, DNA binding domain THMIRHAT_13120 PF04963 Sigma-54 factor, core binding domain THMIRHAT_13140 PF00072 Response regulator receiver domain THMIRHAT_13140 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_13180 PF02810 SEC-C motif THMIRHAT_13190 PF01554 MatE THMIRHAT_13210 PF00293 NUDIX domain THMIRHAT_13220 PF01168 Alanine racemase, N-terminal domain THMIRHAT_13220 PF00842 Alanine racemase, C-terminal domain THMIRHAT_13230 PF00772 DnaB-like helicase N terminal domain THMIRHAT_13230 PF03796 DnaB-like helicase C terminal domain THMIRHAT_13240 PF01281 Ribosomal protein L9, N-terminal domain THMIRHAT_13240 PF03948 Ribosomal protein L9, C-terminal domain THMIRHAT_13260 PF01084 Ribosomal protein S18 THMIRHAT_13270 PF01250 Ribosomal protein S6 THMIRHAT_13280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THMIRHAT_13300 PF00216 Bacterial DNA-binding protein THMIRHAT_13310 PF00575 S1 RNA binding domain THMIRHAT_13320 PF02224 Cytidylate kinase THMIRHAT_13330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMIRHAT_13340 PF02153 Prephenate dehydrogenase THMIRHAT_13350 PF00155 Aminotransferase class I and II THMIRHAT_13360 PF01842 ACT domain THMIRHAT_13360 PF01817 Chorismate mutase type II THMIRHAT_13360 PF00800 Prephenate dehydratase THMIRHAT_13370 PF00266 Aminotransferase class-V THMIRHAT_13380 PF03989 DNA gyrase C-terminal domain, beta-propeller THMIRHAT_13380 PF00521 DNA gyrase/topoisomerase IV, subunit A THMIRHAT_13400 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAT_13420 PF00675 Insulinase (Peptidase family M16) THMIRHAT_13420 PF08367 Peptidase M16C associated THMIRHAT_13420 PF05193 Peptidase M16 inactive domain THMIRHAT_13430 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THMIRHAT_13430 PF01138 3' exoribonuclease family, domain 1 THMIRHAT_13430 PF03725 3' exoribonuclease family, domain 2 THMIRHAT_13430 PF00013 KH domain THMIRHAT_13430 PF00575 S1 RNA binding domain THMIRHAT_13440 PF00312 Ribosomal protein S15 THMIRHAT_13470 PF16198 tRNA pseudouridylate synthase B C-terminal domain THMIRHAT_13470 PF01509 TruB family pseudouridylate synthase (N terminal domain) THMIRHAT_13470 PF09157 Pseudouridine synthase II TruB, C-terminal THMIRHAT_13480 PF02033 Ribosome-binding factor A THMIRHAT_13490 PF04760 Translation initiation factor IF-2, N-terminal region THMIRHAT_13490 PF00009 Elongation factor Tu GTP binding domain THMIRHAT_13490 PF11987 Translation-initiation factor 2 THMIRHAT_13490 PF08364 Bacterial translation initiation factor IF-2 associated region THMIRHAT_13500 PF08529 NusA N-terminal domain THMIRHAT_13500 PF13184 NusA-like KH domain THMIRHAT_13510 PF02576 RimP N-terminal domain THMIRHAT_13510 PF17384 RimP C-terminal SH3 domain THMIRHAT_13540 PF00474 Sodium:solute symporter family THMIRHAT_13550 PF04341 Protein of unknown function, DUF485 THMIRHAT_13560 PF16177 Acetyl-coenzyme A synthetase N-terminus THMIRHAT_13560 PF13193 AMP-binding enzyme C-terminal domain THMIRHAT_13560 PF00501 AMP-binding enzyme THMIRHAT_13580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMIRHAT_13600 PF01928 CYTH domain THMIRHAT_13610 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAT_13660 PF00037 4Fe-4S binding domain THMIRHAT_13690 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_13690 PF00563 EAL domain THMIRHAT_13690 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_13700 PF00593 TonB dependent receptor THMIRHAT_13700 PF07715 TonB-dependent Receptor Plug Domain THMIRHAT_13710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAT_13710 PF07685 CobB/CobQ-like glutamine amidotransferase domain THMIRHAT_13720 PF00085 Thioredoxin THMIRHAT_13730 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_13740 PF12557 Cob(I)alamin adenosyltransferase N terminal THMIRHAT_13740 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THMIRHAT_13750 PF01497 Periplasmic binding protein THMIRHAT_13780 PF02348 Cytidylyltransferase THMIRHAT_13790 PF03966 Trm112p-like protein THMIRHAT_13800 PF02606 Tetraacyldisaccharide-1-P 4'-kinase THMIRHAT_13810 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_13810 PF03772 Competence protein THMIRHAT_13810 PF13567 Domain of unknown function (DUF4131) THMIRHAT_13830 PF13654 AAA domain THMIRHAT_13830 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAT_13840 PF00909 Ammonium Transporter Family THMIRHAT_13870 PF11734 TilS substrate C-terminal domain THMIRHAT_13870 PF01171 PP-loop family THMIRHAT_13870 PF14437 MafB19-like deaminase THMIRHAT_13880 PF00072 Response regulator receiver domain THMIRHAT_13880 PF01584 CheW-like domain THMIRHAT_13890 PF01351 Ribonuclease HII THMIRHAT_13900 PF02684 Lipid-A-disaccharide synthetase THMIRHAT_13910 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THMIRHAT_13910 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_13920 PF07977 FabA-like domain THMIRHAT_13930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THMIRHAT_13930 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_13950 PF07244 Surface antigen variable number repeat THMIRHAT_13950 PF01103 Surface antigen THMIRHAT_13960 PF17820 PDZ domain THMIRHAT_13960 PF02163 Peptidase family M50 THMIRHAT_13980 PF01255 Putative undecaprenyl diphosphate synthase THMIRHAT_13990 PF01765 Ribosome recycling factor THMIRHAT_14000 PF00696 Amino acid kinase family THMIRHAT_14010 PF00889 Elongation factor TS THMIRHAT_14020 PF00318 Ribosomal protein S2 THMIRHAT_14030 PF00557 Metallopeptidase family M24 THMIRHAT_14040 PF01909 Nucleotidyltransferase domain THMIRHAT_14040 PF01966 HD domain THMIRHAT_14040 PF08335 GlnD PII-uridylyltransferase THMIRHAT_14060 PF03776 Septum formation topological specificity factor MinE THMIRHAT_14070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAT_14080 PF05209 Septum formation inhibitor MinC, N-terminal domain THMIRHAT_14080 PF03775 Septum formation inhibitor MinC, C-terminal domain THMIRHAT_14090 PF00330 Aconitase family (aconitate hydratase) THMIRHAT_14090 PF06434 Aconitate hydratase 2 N-terminus THMIRHAT_14090 PF11791 Aconitate B N-terminal domain THMIRHAT_14120 PF00206 Lyase THMIRHAT_14120 PF08328 Adenylosuccinate lyase C-terminal THMIRHAT_14140 PF08007 Cupin superfamily protein THMIRHAT_14150 PF04607 Region found in RelA / SpoT proteins THMIRHAT_14150 PF02824 TGS domain THMIRHAT_14150 PF13291 ACT domain THMIRHAT_14160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THMIRHAT_14170 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THMIRHAT_14170 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THMIRHAT_14180 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THMIRHAT_14180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THMIRHAT_14190 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMIRHAT_14220 PF04102 SlyX THMIRHAT_14230 PF02203 Tar ligand binding domain homologue THMIRHAT_14230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_14230 PF00672 HAMP domain THMIRHAT_14240 PF00849 RNA pseudouridylate synthase THMIRHAT_14240 PF01479 S4 domain THMIRHAT_14250 PF02163 Peptidase family M50 THMIRHAT_14260 PF01300 Telomere recombination THMIRHAT_14270 PF00072 Response regulator receiver domain THMIRHAT_14280 PF00072 Response regulator receiver domain THMIRHAT_14280 PF09308 LuxQ, periplasmic THMIRHAT_14280 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_14290 PF02811 PHP domain THMIRHAT_14300 PF04279 Intracellular septation protein A THMIRHAT_14310 PF03795 YCII-related domain THMIRHAT_14320 PF01726 LexA DNA binding domain THMIRHAT_14320 PF00717 Peptidase S24-like THMIRHAT_14340 PF00892 EamA-like transporter family THMIRHAT_14350 PF04751 Protein of unknown function (DUF615) THMIRHAT_14360 PF00533 BRCA1 C Terminus (BRCT) domain THMIRHAT_14360 PF01653 NAD-dependent DNA ligase adenylation domain THMIRHAT_14360 PF12826 Helix-hairpin-helix motif THMIRHAT_14360 PF03120 NAD-dependent DNA ligase OB-fold domain THMIRHAT_14360 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THMIRHAT_14370 PF04354 ZipA, C-terminal FtsZ-binding domain THMIRHAT_14380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMIRHAT_14390 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAT_14400 PF01258 Prokaryotic dksA/traR C4-type zinc finger THMIRHAT_14470 PF00270 DEAD/DEAH box helicase THMIRHAT_14470 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold THMIRHAT_14470 PF04408 Helicase associated domain (HA2) THMIRHAT_14470 PF00271 Helicase conserved C-terminal domain THMIRHAT_14470 PF11898 Domain of unknown function (DUF3418) THMIRHAT_14480 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_14500 PF00072 Response regulator receiver domain THMIRHAT_14500 PF00158 Sigma-54 interaction domain THMIRHAT_14500 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_14510 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_14510 PF00989 PAS fold THMIRHAT_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_14550 PF02595 Glycerate kinase family THMIRHAT_14560 PF15887 Putative zinc-binding metallo-peptidase THMIRHAT_14560 PF10005 zinc-ribbon domain THMIRHAT_14580 PF14403 Circularly permuted ATP-grasp type 2 THMIRHAT_14590 PF00128 Alpha amylase, catalytic domain THMIRHAT_14620 PF07690 Major Facilitator Superfamily THMIRHAT_14630 PF00474 Sodium:solute symporter family THMIRHAT_14650 PF00583 Acetyltransferase (GNAT) family THMIRHAT_14660 PF00202 Aminotransferase class-III THMIRHAT_14670 PF06339 Ectoine synthase THMIRHAT_14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_14700 PF08447 PAS fold THMIRHAT_14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_14700 PF08447 PAS fold THMIRHAT_14710 PF05231 MASE1 THMIRHAT_14710 PF00563 EAL domain THMIRHAT_14720 PF00005 ABC transporter THMIRHAT_14730 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_14740 PF00005 ABC transporter THMIRHAT_14750 PF00005 ABC transporter THMIRHAT_14770 PF00591 Glycosyl transferase family, a/b domain THMIRHAT_14770 PF02885 Glycosyl transferase family, helical bundle domain THMIRHAT_14780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THMIRHAT_14780 PF14824 Sirohaem biosynthesis protein central THMIRHAT_14780 PF10414 Sirohaem synthase dimerisation region THMIRHAT_14790 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAT_14790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THMIRHAT_14790 PF01568 Molydopterin dinucleotide binding domain THMIRHAT_14790 PF00384 Molybdopterin oxidoreductase THMIRHAT_14800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_14800 PF08447 PAS fold THMIRHAT_14800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_14800 PF08447 PAS fold THMIRHAT_14810 PF13806 Rieske-like [2Fe-2S] domain THMIRHAT_14810 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAT_14810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMIRHAT_14810 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMIRHAT_14810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THMIRHAT_14810 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_14820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THMIRHAT_14820 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAT_14820 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_14820 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMIRHAT_14820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMIRHAT_14830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THMIRHAT_14830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMIRHAT_14830 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAT_14830 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMIRHAT_14830 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_14850 PF06508 Queuosine biosynthesis protein QueC THMIRHAT_14860 PF13525 Outer membrane lipoprotein THMIRHAT_14860 PF16331 TolA binding protein trimerisation THMIRHAT_14870 PF00691 OmpA family THMIRHAT_14880 PF04052 TolB amino-terminal domain THMIRHAT_14880 PF07676 WD40-like Beta Propeller Repeat THMIRHAT_14900 PF02472 Biopolymer transport protein ExbD/TolR THMIRHAT_14910 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_14920 PF05496 Holliday junction DNA helicase RuvB P-loop domain THMIRHAT_14920 PF05491 RuvB C-terminal winged helix domain THMIRHAT_14920 PF17864 RuvB AAA lid domain THMIRHAT_14930 PF01330 RuvA N terminal domain THMIRHAT_14930 PF07499 RuvA, C-terminal domain THMIRHAT_14940 PF02075 Crossover junction endodeoxyribonuclease RuvC THMIRHAT_14950 PF02445 Quinolinate synthetase A protein THMIRHAT_14960 PF00152 tRNA synthetases class II (D, K and N) THMIRHAT_14960 PF02938 GAD domain THMIRHAT_14960 PF01336 OB-fold nucleic acid binding domain THMIRHAT_14980 PF00106 short chain dehydrogenase THMIRHAT_14990 PF01734 Patatin-like phospholipase THMIRHAT_15010 PF00005 ABC transporter THMIRHAT_15030 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_15050 PF00158 Sigma-54 interaction domain THMIRHAT_15050 PF01590 GAF domain THMIRHAT_15050 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_15060 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_15060 PF18113 Rubredoxin binding C-terminal domain THMIRHAT_15090 PF02560 Cyanate lyase C-terminal domain THMIRHAT_15110 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAT_15120 PF01842 ACT domain THMIRHAT_15120 PF03447 Homoserine dehydrogenase, NAD binding domain THMIRHAT_15120 PF00742 Homoserine dehydrogenase THMIRHAT_15130 PF00155 Aminotransferase class I and II THMIRHAT_15140 PF04430 Protein of unknown function (DUF498/DUF598) THMIRHAT_15150 PF01551 Peptidase family M23 THMIRHAT_15150 PF01476 LysM domain THMIRHAT_15160 PF09335 SNARE associated Golgi protein THMIRHAT_15180 PF01975 Survival protein SurE THMIRHAT_15190 PF01713 Smr domain THMIRHAT_15200 PF04977 Septum formation initiator THMIRHAT_15210 PF00113 Enolase, C-terminal TIM barrel domain THMIRHAT_15210 PF03952 Enolase, N-terminal domain THMIRHAT_15220 PF00793 DAHP synthetase I family THMIRHAT_15230 PF00117 Glutamine amidotransferase class-I THMIRHAT_15230 PF06418 CTP synthase N-terminus THMIRHAT_15240 PF11734 TilS substrate C-terminal domain THMIRHAT_15240 PF01171 PP-loop family THMIRHAT_15250 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit THMIRHAT_15260 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding THMIRHAT_15260 PF18381 YcaO cyclodehydratase C-terminal domain THMIRHAT_15290 PF00814 Glycoprotease family THMIRHAT_15300 PF13307 Helicase C-terminal domain THMIRHAT_15300 PF06733 DEAD_2 THMIRHAT_15310 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_15310 PF07724 AAA domain (Cdc48 subfamily) THMIRHAT_15310 PF17871 AAA lid domain THMIRHAT_15310 PF02861 Clp amino terminal domain, pathogenicity island component THMIRHAT_15310 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAT_15320 PF02617 ATP-dependent Clp protease adaptor protein ClpS THMIRHAT_15330 PF00226 DnaJ domain THMIRHAT_15330 PF01556 DnaJ C terminal domain THMIRHAT_15340 PF08274 PhnA Zinc-Ribbon THMIRHAT_15340 PF03831 PhnA domain THMIRHAT_15350 PF01810 LysE type translocator THMIRHAT_15360 PF02253 Phospholipase A1 THMIRHAT_15370 PF17783 CvfB-like winged helix domain THMIRHAT_15370 PF13509 S1 domain THMIRHAT_15390 PF03971 Monomeric isocitrate dehydrogenase THMIRHAT_15400 PF00849 RNA pseudouridylate synthase THMIRHAT_15420 PF04356 Protein of unknown function (DUF489) THMIRHAT_15440 PF05698 Bacterial trigger factor protein (TF) C-terminus THMIRHAT_15450 PF00072 Response regulator receiver domain THMIRHAT_15460 PF00672 HAMP domain THMIRHAT_15460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_15460 PF02203 Tar ligand binding domain homologue THMIRHAT_15480 PF00664 ABC transporter transmembrane region THMIRHAT_15480 PF00005 ABC transporter THMIRHAT_15490 PF01026 TatD related DNase THMIRHAT_15500 PF09115 DNA polymerase III, delta subunit, C terminal THMIRHAT_15510 PF02223 Thymidylate kinase THMIRHAT_15520 PF02618 YceG-like family THMIRHAT_15530 PF01063 Amino-transferase class IV THMIRHAT_15540 PF00425 chorismate binding enzyme THMIRHAT_15540 PF04715 Anthranilate synthase component I, N terminal region THMIRHAT_15550 PF00109 Beta-ketoacyl synthase, N-terminal domain THMIRHAT_15550 PF02801 Beta-ketoacyl synthase, C-terminal domain THMIRHAT_15560 PF00550 Phosphopantetheine attachment site THMIRHAT_15580 PF00698 Acyl transferase domain THMIRHAT_15590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THMIRHAT_15590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal THMIRHAT_15600 PF02504 Fatty acid synthesis protein THMIRHAT_15610 PF01783 Ribosomal L32p protein family THMIRHAT_15630 PF02545 Maf-like protein THMIRHAT_15640 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAT_15650 PF01479 S4 domain THMIRHAT_15650 PF00849 RNA pseudouridylate synthase THMIRHAT_15660 PF10150 Ribonuclease E/G family THMIRHAT_15660 PF12111 Polyribonucleotide phosphorylase C terminal THMIRHAT_15660 PF00575 S1 RNA binding domain THMIRHAT_15670 PF09190 DALR domain THMIRHAT_15670 PF01406 tRNA synthetases class I (C) catalytic domain THMIRHAT_15680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THMIRHAT_15690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THMIRHAT_15710 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMIRHAT_15710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain THMIRHAT_15720 PF00149 Calcineurin-like phosphoesterase THMIRHAT_15740 PF00375 Sodium:dicarboxylate symporter family THMIRHAT_15750 PF00581 Rhodanese-like domain THMIRHAT_15760 PF04608 Phosphatidylglycerophosphatase A THMIRHAT_15770 PF00764 Arginosuccinate synthase THMIRHAT_15780 PF02666 Phosphatidylserine decarboxylase THMIRHAT_15790 PF00543 Nitrogen regulatory protein P-II THMIRHAT_15800 PF00709 Adenylosuccinate synthetase THMIRHAT_15810 PF13393 Histidyl-tRNA synthetase THMIRHAT_15820 PF01145 SPFH domain / Band 7 family THMIRHAT_15830 PF01145 SPFH domain / Band 7 family THMIRHAT_15840 PF01926 50S ribosome-binding GTPase THMIRHAT_15840 PF13167 GTP-binding GTPase N-terminal THMIRHAT_15840 PF16360 GTP-binding GTPase Middle Region THMIRHAT_15850 PF17209 Hfq protein THMIRHAT_15870 PF01119 DNA mismatch repair protein, C-terminal domain THMIRHAT_15870 PF08676 MutL C terminal dimerisation domain THMIRHAT_15880 PF01520 N-acetylmuramoyl-L-alanine amidase THMIRHAT_15880 PF11741 AMIN domain THMIRHAT_15890 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THMIRHAT_15900 PF08331 Domain of unknown function (DUF1730) THMIRHAT_15990 PF00480 ROK family THMIRHAT_16010 PF04305 Protein of unknown function (DUF455) THMIRHAT_16030 PF01272 Transcription elongation factor, GreA/GreB, C-term THMIRHAT_16030 PF03449 Transcription elongation factor, N-terminal THMIRHAT_16040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMIRHAT_16040 PF02142 MGS-like domain THMIRHAT_16040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THMIRHAT_16050 PF00117 Glutamine amidotransferase class-I THMIRHAT_16050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THMIRHAT_16060 PF00578 AhpC/TSA family THMIRHAT_16070 PF00472 RF-1 domain THMIRHAT_16080 PF09905 DNA-binding protein VF530 THMIRHAT_16090 PF01479 S4 domain THMIRHAT_16090 PF00849 RNA pseudouridylate synthase THMIRHAT_16100 PF05173 Dihydrodipicolinate reductase, C-terminus THMIRHAT_16100 PF01113 Dihydrodipicolinate reductase, N-terminus THMIRHAT_16110 PF00684 DnaJ central domain THMIRHAT_16110 PF01556 DnaJ C terminal domain THMIRHAT_16110 PF00226 DnaJ domain THMIRHAT_16120 PF00012 Hsp70 protein THMIRHAT_16130 PF01025 GrpE THMIRHAT_16140 PF01513 ATP-NAD kinase THMIRHAT_16150 PF02463 RecF/RecN/SMC N terminal domain THMIRHAT_16180 PF01475 Ferric uptake regulator family THMIRHAT_16200 PF03658 RnfH family Ubiquitin THMIRHAT_16210 PF03364 Polyketide cyclase / dehydrase and lipid transport THMIRHAT_16220 PF01668 SmpB protein THMIRHAT_16230 PF00156 Phosphoribosyl transferase domain THMIRHAT_16250 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_16260 PF00005 ABC transporter THMIRHAT_16270 PF09084 NMT1/THI5 like THMIRHAT_16300 PF07729 FCD domain THMIRHAT_16300 PF00392 Bacterial regulatory proteins, gntR family THMIRHAT_16310 PF00576 HIUase/Transthyretin family THMIRHAT_16320 PF00941 FAD binding domain in molybdopterin dehydrogenase THMIRHAT_16320 PF03450 CO dehydrogenase flavoprotein C-terminal domain THMIRHAT_16330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain THMIRHAT_16330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase THMIRHAT_16340 PF02625 XdhC and CoxI family THMIRHAT_16340 PF13478 XdhC Rossmann domain THMIRHAT_16350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMIRHAT_16410 PF00005 ABC transporter THMIRHAT_16420 PF01402 Ribbon-helix-helix protein, copG family THMIRHAT_16420 PF08753 NikR C terminal nickel binding domain THMIRHAT_16440 PF09347 Domain of unknown function (DUF1989) THMIRHAT_16450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMIRHAT_16450 PF00289 Biotin carboxylase, N-terminal domain THMIRHAT_16450 PF02785 Biotin carboxylase C-terminal domain THMIRHAT_16460 PF01425 Amidase THMIRHAT_16490 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_16510 PF00497 Bacterial extracellular solute-binding proteins, family 3 THMIRHAT_16520 PF02608 ABC transporter substrate-binding protein PnrA-like THMIRHAT_16540 PF01979 Amidohydrolase family THMIRHAT_16550 PF03737 Aldolase/RraA THMIRHAT_16560 PF07687 Peptidase dimerisation domain THMIRHAT_16560 PF01546 Peptidase family M20/M25/M40 THMIRHAT_16570 PF00266 Aminotransferase class-V THMIRHAT_16580 PF01925 Sulfite exporter TauE/SafE THMIRHAT_16600 PF01425 Amidase THMIRHAT_16610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAT_16620 PF00929 Exonuclease THMIRHAT_16630 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_16630 PF17158 Membrane-associated sensor, integral membrane domain THMIRHAT_16650 PF00075 RNase H THMIRHAT_16660 PF08241 Methyltransferase domain THMIRHAT_16670 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_16670 PF16123 Hydroxyacylglutathione hydrolase C-terminus THMIRHAT_16680 PF01464 Transglycosylase SLT domain THMIRHAT_16680 PF01476 LysM domain THMIRHAT_16690 PF01464 Transglycosylase SLT domain THMIRHAT_16690 PF14718 Soluble lytic murein transglycosylase L domain THMIRHAT_16700 PF01451 Low molecular weight phosphotyrosine protein phosphatase THMIRHAT_16710 PF00849 RNA pseudouridylate synthase THMIRHAT_16750 PF00361 Proton-conducting membrane transporter THMIRHAT_16760 PF00361 Proton-conducting membrane transporter THMIRHAT_16760 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus THMIRHAT_16770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMIRHAT_16770 PF00361 Proton-conducting membrane transporter THMIRHAT_16780 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THMIRHAT_16790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THMIRHAT_16800 PF12838 4Fe-4S dicluster domain THMIRHAT_16810 PF00146 NADH dehydrogenase THMIRHAT_16820 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THMIRHAT_16820 PF00384 Molybdopterin oxidoreductase THMIRHAT_16820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THMIRHAT_16830 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMIRHAT_16830 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THMIRHAT_16830 PF10531 SLBB domain THMIRHAT_16850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THMIRHAT_16860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THMIRHAT_16870 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THMIRHAT_16880 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THMIRHAT_16890 PF03840 Preprotein translocase SecG subunit THMIRHAT_16900 PF00121 Triosephosphate isomerase THMIRHAT_16910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAT_16910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAT_16910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAT_16910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAT_16920 PF00809 Pterin binding enzyme THMIRHAT_16930 PF01434 Peptidase family M41 THMIRHAT_16930 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_16930 PF17862 AAA+ lid domain THMIRHAT_16930 PF06480 FtsH Extracellular THMIRHAT_16940 PF01728 FtsJ-like methyltransferase THMIRHAT_16950 PF01985 CRS1 / YhbY (CRM) domain THMIRHAT_16960 PF01053 Cys/Met metabolism PLP-dependent enzyme THMIRHAT_16970 PF00156 Phosphoribosyl transferase domain THMIRHAT_16990 PF02875 Mur ligase family, glutamate ligase domain THMIRHAT_16990 PF08245 Mur ligase middle domain THMIRHAT_17000 PF01039 Carboxyl transferase domain THMIRHAT_17000 PF17848 Acetyl-coA carboxylase zinc finger domain THMIRHAT_17010 PF00290 Tryptophan synthase alpha chain THMIRHAT_17020 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAT_17030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THMIRHAT_17040 PF01416 tRNA pseudouridine synthase THMIRHAT_17050 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMIRHAT_17050 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMIRHAT_17070 PF01551 Peptidase family M23 THMIRHAT_17070 PF04225 Opacity-associated protein A LysM-like domain THMIRHAT_17080 PF00180 Isocitrate/isopropylmalate dehydrogenase THMIRHAT_17090 PF00694 Aconitase C-terminal domain THMIRHAT_17100 PF00330 Aconitase family (aconitate hydratase) THMIRHAT_17120 PF00762 Ferrochelatase THMIRHAT_17150 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THMIRHAT_17150 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THMIRHAT_17180 PF01769 Divalent cation transporter THMIRHAT_17180 PF00571 CBS domain THMIRHAT_17180 PF03448 MgtE intracellular N domain THMIRHAT_17190 PF03471 Transporter associated domain THMIRHAT_17190 PF00571 CBS domain THMIRHAT_17190 PF01595 Cyclin M transmembrane N-terminal domain THMIRHAT_17200 PF04542 Sigma-70 region 2 THMIRHAT_17200 PF08281 Sigma-70, region 4 THMIRHAT_17230 PF12794 Mechanosensitive ion channel inner membrane domain 1 THMIRHAT_17230 PF12795 Mechanosensitive ion channel porin domain THMIRHAT_17230 PF00924 Mechanosensitive ion channel THMIRHAT_17240 PF08443 RimK-like ATP-grasp domain THMIRHAT_17240 PF18030 RimK PreATP-grasp domain THMIRHAT_17260 PF18030 RimK PreATP-grasp domain THMIRHAT_17260 PF08443 RimK-like ATP-grasp domain THMIRHAT_17280 PF05552 Conserved TM helix THMIRHAT_17280 PF00924 Mechanosensitive ion channel THMIRHAT_17310 PF00005 ABC transporter THMIRHAT_17310 PF12848 ABC transporter THMIRHAT_17320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMIRHAT_17320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMIRHAT_17390 PF01433 Peptidase family M1 domain THMIRHAT_17390 PF17432 Domain of unknown function (DUF3458_C) ARM repeats THMIRHAT_17390 PF11940 Domain of unknown function (DUF3458) Ig-like fold THMIRHAT_17400 PF00691 OmpA family THMIRHAT_17410 PF00027 Cyclic nucleotide-binding domain THMIRHAT_17410 PF13545 Crp-like helix-turn-helix domain THMIRHAT_17430 PF00294 pfkB family carbohydrate kinase THMIRHAT_17440 PF08032 RNA 2'-O ribose methyltransferase substrate binding THMIRHAT_17440 PF00588 SpoU rRNA Methylase family THMIRHAT_17450 PF08206 Ribonuclease B OB domain THMIRHAT_17450 PF17876 Cold shock domain THMIRHAT_17450 PF08461 Ribonuclease R winged-helix domain THMIRHAT_17450 PF00575 S1 RNA binding domain THMIRHAT_17450 PF00773 RNB domain THMIRHAT_17460 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_17460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAT_17470 PF01464 Transglycosylase SLT domain THMIRHAT_17470 PF00497 Bacterial extracellular solute-binding proteins, family 3 THMIRHAT_17480 PF01966 HD domain THMIRHAT_17490 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain THMIRHAT_17500 PF00719 Inorganic pyrophosphatase THMIRHAT_17510 PF12823 Domain of unknown function (DUF3817) THMIRHAT_17520 PF00916 Sulfate permease family THMIRHAT_17520 PF01740 STAS domain THMIRHAT_17540 PF06865 Pyrimidine/purine nucleoside phosphorylase THMIRHAT_17560 PF00873 AcrB/AcrD/AcrF family THMIRHAT_17570 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAT_17570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_17590 PF04264 YceI-like domain THMIRHAT_17600 PF01292 Prokaryotic cytochrome b561 THMIRHAT_17610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily THMIRHAT_17620 PF01053 Cys/Met metabolism PLP-dependent enzyme THMIRHAT_17640 PF12832 MFS_1 like family THMIRHAT_17660 PF01264 Chorismate synthase THMIRHAT_17680 PF01649 Ribosomal protein S20 THMIRHAT_17700 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 THMIRHAT_17710 PF02913 FAD linked oxidases, C-terminal domain THMIRHAT_17710 PF13183 4Fe-4S dicluster domain THMIRHAT_17710 PF01565 FAD binding domain THMIRHAT_17720 PF00535 Glycosyl transferase family 2 THMIRHAT_17750 PF04393 Protein of unknown function (DUF535) THMIRHAT_17770 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THMIRHAT_17780 PF01370 NAD dependent epimerase/dehydratase family THMIRHAT_17800 PF00005 ABC transporter THMIRHAT_17800 PF00664 ABC transporter transmembrane region THMIRHAT_17810 PF03279 Bacterial lipid A biosynthesis acyltransferase THMIRHAT_17820 PF00311 Phosphoenolpyruvate carboxylase THMIRHAT_17830 PF02261 Aspartate decarboxylase THMIRHAT_17840 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAT_17840 PF00691 OmpA family THMIRHAT_17850 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_17860 PF02569 Pantoate-beta-alanine ligase THMIRHAT_17870 PF02548 Ketopantoate hydroxymethyltransferase THMIRHAT_17880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THMIRHAT_17890 PF12627 Probable RNA and SrmB- binding site of polymerase A THMIRHAT_17890 PF12626 Polymerase A arginine-rich C-terminus THMIRHAT_17890 PF01743 Poly A polymerase head domain THMIRHAT_17910 PF00579 tRNA synthetases class I (W and Y) THMIRHAT_17920 PF08335 GlnD PII-uridylyltransferase THMIRHAT_17920 PF03710 Glutamate-ammonia ligase adenylyltransferase THMIRHAT_17940 PF00543 Nitrogen regulatory protein P-II THMIRHAT_17950 PF00909 Ammonium Transporter Family THMIRHAT_17970 PF00700 Bacterial flagellin C-terminal helical region THMIRHAT_17970 PF00669 Bacterial flagellin N-terminal helical region THMIRHAT_17980 PF08264 Anticodon-binding domain of tRNA THMIRHAT_17980 PF10458 Valyl tRNA synthetase tRNA binding arm THMIRHAT_17980 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAT_17990 PF08239 Bacterial SH3 domain THMIRHAT_18000 PF13098 Thioredoxin-like domain THMIRHAT_18000 PF10411 Disulfide bond isomerase protein N-terminus THMIRHAT_18010 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAT_18010 PF00589 Phage integrase family THMIRHAT_18020 PF01245 Ribosomal protein L19 THMIRHAT_18030 PF01746 tRNA (Guanine-1)-methyltransferase THMIRHAT_18040 PF01782 RimM N-terminal domain THMIRHAT_18040 PF05239 PRC-barrel domain THMIRHAT_18050 PF00886 Ribosomal protein S16 THMIRHAT_18060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THMIRHAT_18060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THMIRHAT_18070 PF10369 Small subunit of acetolactate synthase THMIRHAT_18080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAT_18080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAT_18080 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAT_18090 PF00929 Exonuclease THMIRHAT_18100 PF01435 Peptidase family M48 THMIRHAT_18110 PF01329 Pterin 4 alpha carbinolamine dehydratase THMIRHAT_18120 PF03193 RsgA GTPase THMIRHAT_18140 PF00034 Cytochrome c THMIRHAT_18150 PF00034 Cytochrome c THMIRHAT_18160 PF02646 RmuC family THMIRHAT_18200 PF00482 Type II secretion system (T2SS), protein F THMIRHAT_18210 PF00437 Type II/IV secretion system protein THMIRHAT_18230 PF03958 Bacterial type II/III secretion system short domain THMIRHAT_18230 PF00263 Bacterial type II and III secretion system protein THMIRHAT_18240 PF13401 AAA domain THMIRHAT_18240 PF01471 Putative peptidoglycan binding domain THMIRHAT_18270 PF00575 S1 RNA binding domain THMIRHAT_18270 PF10150 Ribonuclease E/G family THMIRHAT_18280 PF02545 Maf-like protein THMIRHAT_18290 PF01966 HD domain THMIRHAT_18300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_18300 PF00072 Response regulator receiver domain THMIRHAT_18300 PF00672 HAMP domain THMIRHAT_18300 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_18300 PF01627 Hpt domain THMIRHAT_18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_18310 PF02590 Predicted SPOUT methyltransferase THMIRHAT_18330 PF01467 Cytidylyltransferase-like THMIRHAT_18350 PF00171 Aldehyde dehydrogenase family THMIRHAT_18380 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAT_18380 PF08264 Anticodon-binding domain of tRNA THMIRHAT_18380 PF13603 Leucyl-tRNA synthetase, Domain 2 THMIRHAT_18400 PF00795 Carbon-nitrogen hydrolase THMIRHAT_18410 PF03471 Transporter associated domain THMIRHAT_18410 PF00571 CBS domain THMIRHAT_18420 PF02130 Uncharacterized protein family UPF0054 THMIRHAT_18430 PF02562 PhoH-like protein THMIRHAT_18440 PF04055 Radical SAM superfamily THMIRHAT_18440 PF00919 Uncharacterized protein family UPF0004 THMIRHAT_18440 PF01938 TRAM domain THMIRHAT_18450 PF02203 Tar ligand binding domain homologue THMIRHAT_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_18450 PF00672 HAMP domain THMIRHAT_18460 PF00194 Eukaryotic-type carbonic anhydrase THMIRHAT_18470 PF05175 Methyltransferase small domain THMIRHAT_18480 PF00994 Probable molybdopterin binding domain THMIRHAT_18490 PF02190 ATP-dependent protease La (LON) substrate-binding domain THMIRHAT_18490 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAT_18490 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_18510 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_18510 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_18510 PF00563 EAL domain THMIRHAT_18520 PF07689 KaiB domain THMIRHAT_18530 PF00158 Sigma-54 interaction domain THMIRHAT_18530 PF00072 Response regulator receiver domain THMIRHAT_18530 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_18540 PF08448 PAS fold THMIRHAT_18540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_18540 PF08447 PAS fold THMIRHAT_18560 PF01722 BolA-like protein THMIRHAT_18580 PF00111 2Fe-2S iron-sulfur cluster binding domain THMIRHAT_18590 PF13662 Toprim domain THMIRHAT_18590 PF02132 RecR protein THMIRHAT_18600 PF02575 YbaB/EbfC DNA-binding family THMIRHAT_18610 PF12169 DNA polymerase III subunits gamma and tau domain III THMIRHAT_18610 PF12170 DNA polymerase III tau subunit V interacting with alpha THMIRHAT_18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_18620 PF03466 LysR substrate binding domain THMIRHAT_18640 PF01725 Ham1 family THMIRHAT_18750 PF00101 Ribulose bisphosphate carboxylase, small chain THMIRHAT_18760 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THMIRHAT_18760 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THMIRHAT_18780 PF00571 CBS domain THMIRHAT_18780 PF01769 Divalent cation transporter THMIRHAT_18780 PF03448 MgtE intracellular N domain THMIRHAT_18800 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) THMIRHAT_18810 PF00361 Proton-conducting membrane transporter THMIRHAT_18810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMIRHAT_18840 PF00293 NUDIX domain THMIRHAT_18850 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAT_18860 PF00850 Histone deacetylase domain THMIRHAT_18900 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_18900 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_18900 PF00563 EAL domain THMIRHAT_18910 PF03705 CheR methyltransferase, all-alpha domain THMIRHAT_18910 PF01739 CheR methyltransferase, SAM binding domain THMIRHAT_18910 PF08448 PAS fold THMIRHAT_18910 PF01339 CheB methylesterase THMIRHAT_18920 PF05724 Thiopurine S-methyltransferase (TPMT) THMIRHAT_18940 PF17284 Spermidine synthase tetramerisation domain THMIRHAT_18960 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_18980 PF17850 CysA C-terminal regulatory domain THMIRHAT_18980 PF00005 ABC transporter THMIRHAT_18990 PF05872 Bacterial protein of unknown function (DUF853) THMIRHAT_19010 PF00268 Ribonucleotide reductase, small chain THMIRHAT_19020 PF00300 Histidine phosphatase superfamily (branch 1) THMIRHAT_19080 PF00005 ABC transporter THMIRHAT_19090 PF01032 FecCD transport family THMIRHAT_19100 PF03631 Virulence factor BrkB THMIRHAT_19110 PF00563 EAL domain THMIRHAT_19110 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_19110 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_19130 PF01965 DJ-1/PfpI family THMIRHAT_19140 PF13180 PDZ domain THMIRHAT_19140 PF03572 Peptidase family S41 THMIRHAT_19150 PF01022 Bacterial regulatory protein, arsR family THMIRHAT_19170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_19170 PF03466 LysR substrate binding domain THMIRHAT_19180 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THMIRHAT_19180 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THMIRHAT_19190 PF08406 CbbQ/NirQ/NorQ C-terminal THMIRHAT_19190 PF07728 AAA domain (dynein-related subfamily) THMIRHAT_19200 PF00092 von Willebrand factor type A domain THMIRHAT_19210 PF00484 Carbonic anhydrase THMIRHAT_19240 PF04143 Sulphur transport THMIRHAT_19250 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAT_19250 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_19250 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAT_19270 PF05992 SbmA/BacA-like family THMIRHAT_19300 PF00005 ABC transporter THMIRHAT_19310 PF07690 Major Facilitator Superfamily THMIRHAT_19320 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAT_19320 PF17871 AAA lid domain THMIRHAT_19320 PF07724 AAA domain (Cdc48 subfamily) THMIRHAT_19320 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_19320 PF02861 Clp amino terminal domain, pathogenicity island component THMIRHAT_19350 PF00227 Proteasome subunit THMIRHAT_19360 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAT_19360 PF00589 Phage integrase family THMIRHAT_19400 PF01678 Diaminopimelate epimerase THMIRHAT_19430 PF00872 Transposase, Mutator family THMIRHAT_19440 PF00916 Sulfate permease family THMIRHAT_19440 PF01740 STAS domain THMIRHAT_19450 PF07724 AAA domain (Cdc48 subfamily) THMIRHAT_19450 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_19470 PF01209 ubiE/COQ5 methyltransferase family THMIRHAT_19490 PF03109 ABC1 family THMIRHAT_19500 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain THMIRHAT_19500 PF01464 Transglycosylase SLT domain THMIRHAT_19510 PF07885 Ion channel THMIRHAT_19510 PF00027 Cyclic nucleotide-binding domain THMIRHAT_19530 PF02203 Tar ligand binding domain homologue THMIRHAT_19530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_19530 PF00672 HAMP domain THMIRHAT_19570 PF01926 50S ribosome-binding GTPase THMIRHAT_19570 PF06071 Protein of unknown function (DUF933) THMIRHAT_19580 PF01195 Peptidyl-tRNA hydrolase THMIRHAT_19590 PF01386 Ribosomal L25p family THMIRHAT_19590 PF14693 Ribosomal protein TL5, C-terminal domain THMIRHAT_19600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THMIRHAT_19600 PF14572 Phosphoribosyl synthetase-associated domain THMIRHAT_19620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain THMIRHAT_19620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain THMIRHAT_19620 PF01488 Shikimate / quinate 5-dehydrogenase THMIRHAT_19630 PF00472 RF-1 domain THMIRHAT_19630 PF03462 PCRF domain THMIRHAT_19640 PF17827 PrmC N-terminal domain THMIRHAT_19640 PF13847 Methyltransferase domain THMIRHAT_19650 PF00899 ThiF family THMIRHAT_19660 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAT_19660 PF00691 OmpA family THMIRHAT_19670 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_19680 PF03989 DNA gyrase C-terminal domain, beta-propeller THMIRHAT_19680 PF00521 DNA gyrase/topoisomerase IV, subunit A THMIRHAT_19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_19720 PF00986 DNA gyrase B subunit, carboxyl terminus THMIRHAT_19720 PF01751 Toprim domain THMIRHAT_19720 PF00204 DNA gyrase B THMIRHAT_19730 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region THMIRHAT_19730 PF01243 Pyridoxamine 5'-phosphate oxidase THMIRHAT_19740 PF03167 Uracil DNA glycosylase superfamily THMIRHAT_19750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_19750 PF00672 HAMP domain THMIRHAT_19750 PF02203 Tar ligand binding domain homologue THMIRHAT_19760 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAT_19760 PF00691 OmpA family THMIRHAT_19780 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAT_19810 PF02092 Glycyl-tRNA synthetase beta subunit THMIRHAT_19810 PF05746 DALR anticodon binding domain THMIRHAT_19820 PF02091 Glycyl-tRNA synthetase alpha subunit THMIRHAT_19830 PF00581 Rhodanese-like domain THMIRHAT_19830 PF01206 Sulfurtransferase TusA THMIRHAT_19840 PF04225 Opacity-associated protein A LysM-like domain THMIRHAT_19840 PF01551 Peptidase family M23 THMIRHAT_19850 PF03702 Anhydro-N-acetylmuramic acid kinase THMIRHAT_19860 PF00285 Citrate synthase, C-terminal domain THMIRHAT_19870 PF01521 Iron-sulphur cluster biosynthesis THMIRHAT_19880 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMIRHAT_19880 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMIRHAT_19890 PF00465 Iron-containing alcohol dehydrogenase THMIRHAT_19900 PF00196 Bacterial regulatory proteins, luxR family THMIRHAT_19900 PF00072 Response regulator receiver domain THMIRHAT_19930 PF01389 OmpA-like transmembrane domain THMIRHAT_19930 PF00691 OmpA family THMIRHAT_19960 PF00664 ABC transporter transmembrane region THMIRHAT_19960 PF00005 ABC transporter THMIRHAT_19960 PF03412 Peptidase C39 family THMIRHAT_19980 PF00072 Response regulator receiver domain THMIRHAT_19980 PF00196 Bacterial regulatory proteins, luxR family THMIRHAT_20000 PF13335 Magnesium chelatase, subunit ChlI C-terminal THMIRHAT_20000 PF01078 Magnesium chelatase, subunit ChlI THMIRHAT_20010 PF04380 Membrane fusogenic activity THMIRHAT_20020 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_20040 PF03485 Arginyl tRNA synthetase N terminal domain THMIRHAT_20040 PF05746 DALR anticodon binding domain THMIRHAT_20040 PF00750 tRNA synthetases class I (R) THMIRHAT_20050 PF13368 Topoisomerase C-terminal repeat THMIRHAT_20050 PF01131 DNA topoisomerase THMIRHAT_20050 PF01751 Toprim domain THMIRHAT_20060 PF00072 Response regulator receiver domain THMIRHAT_20060 PF00196 Bacterial regulatory proteins, luxR family THMIRHAT_20070 PF02481 DNA recombination-mediator protein A THMIRHAT_20070 PF17782 DprA winged helix domain THMIRHAT_20080 PF01327 Polypeptide deformylase THMIRHAT_20090 PF02911 Formyl transferase, C-terminal domain THMIRHAT_20090 PF00551 Formyl transferase THMIRHAT_20100 PF01029 NusB family THMIRHAT_20100 PF01189 16S rRNA methyltransferase RsmB/F THMIRHAT_20120 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_20120 PF00672 HAMP domain THMIRHAT_20120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_20120 PF00989 PAS fold THMIRHAT_20130 PF02954 Bacterial regulatory protein, Fis family THMIRHAT_20130 PF00072 Response regulator receiver domain THMIRHAT_20130 PF00158 Sigma-54 interaction domain THMIRHAT_20140 PF02254 TrkA-N domain THMIRHAT_20140 PF02080 TrkA-C domain THMIRHAT_20150 PF02386 Cation transport protein THMIRHAT_20230 PF01171 PP-loop family THMIRHAT_20260 PF10531 SLBB domain THMIRHAT_20270 PF03475 3-alpha domain THMIRHAT_20270 PF03473 MOSC domain THMIRHAT_20290 PF01925 Sulfite exporter TauE/SafE THMIRHAT_20300 PF05958 tRNA (Uracil-5-)-methyltransferase THMIRHAT_20310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_20310 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAT_20320 PF00664 ABC transporter transmembrane region THMIRHAT_20320 PF00005 ABC transporter THMIRHAT_20420 PF00589 Phage integrase family THMIRHAT_20440 PF00872 Transposase, Mutator family THMIRHAT_20490 PF13302 Acetyltransferase (GNAT) domain THMIRHAT_20490 PF00027 Cyclic nucleotide-binding domain THMIRHAT_20500 PF00211 Adenylate and Guanylate cyclase catalytic domain THMIRHAT_20500 PF00072 Response regulator receiver domain THMIRHAT_20530 PF00005 ABC transporter THMIRHAT_20530 PF14524 Wzt C-terminal domain THMIRHAT_20550 PF00535 Glycosyl transferase family 2 THMIRHAT_20560 PF00483 Nucleotidyl transferase THMIRHAT_20570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase THMIRHAT_20580 PF04321 RmlD substrate binding domain THMIRHAT_20590 PF16363 GDP-mannose 4,6 dehydratase THMIRHAT_20610 PF01943 Polysaccharide biosynthesis protein THMIRHAT_20610 PF14667 Polysaccharide biosynthesis C-terminal domain THMIRHAT_20640 PF02397 Bacterial sugar transferase THMIRHAT_20650 PF01380 SIS domain THMIRHAT_20660 PF02310 B12 binding domain THMIRHAT_20660 PF02607 B12 binding domain THMIRHAT_20660 PF02574 Homocysteine S-methyltransferase THMIRHAT_20660 PF02965 Vitamin B12 dependent methionine synthase, activation domain THMIRHAT_20660 PF00809 Pterin binding enzyme THMIRHAT_20680 PF01909 Nucleotidyltransferase domain THMIRHAT_20740 PF00561 alpha/beta hydrolase fold THMIRHAT_20750 PF00563 EAL domain THMIRHAT_20750 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_20750 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_20790 PF01967 MoaC family THMIRHAT_20800 PF00994 Probable molybdopterin binding domain THMIRHAT_20800 PF03454 MoeA C-terminal region (domain IV) THMIRHAT_20800 PF03453 MoeA N-terminal region (domain I and II) THMIRHAT_20810 PF02391 MoaE protein THMIRHAT_20820 PF02597 ThiS family THMIRHAT_20830 PF04055 Radical SAM superfamily THMIRHAT_20830 PF06463 Molybdenum Cofactor Synthesis C THMIRHAT_20860 PF00174 Oxidoreductase molybdopterin binding domain THMIRHAT_20880 PF00490 Delta-aminolevulinic acid dehydratase THMIRHAT_20890 PF01488 Shikimate / quinate 5-dehydrogenase THMIRHAT_20890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain THMIRHAT_20890 PF08501 Shikimate dehydrogenase substrate binding domain THMIRHAT_20900 PF01590 GAF domain THMIRHAT_20900 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_20900 PF00563 EAL domain THMIRHAT_20900 PF00360 Phytochrome region THMIRHAT_20910 PF00111 2Fe-2S iron-sulfur cluster binding domain THMIRHAT_20910 PF00175 Oxidoreductase NAD-binding domain THMIRHAT_20910 PF00970 Oxidoreductase FAD-binding domain THMIRHAT_20920 PF03372 Endonuclease/Exonuclease/phosphatase family THMIRHAT_20930 PF13361 UvrD-like helicase C-terminal domain THMIRHAT_20930 PF00580 UvrD/REP helicase N-terminal domain THMIRHAT_20940 PF00211 Adenylate and Guanylate cyclase catalytic domain THMIRHAT_20950 PF00005 ABC transporter THMIRHAT_20960 PF05430 S-adenosyl-L-methionine-dependent methyltransferase THMIRHAT_20960 PF01266 FAD dependent oxidoreductase THMIRHAT_20980 PF01966 HD domain THMIRHAT_20990 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_20990 PF12706 Beta-lactamase superfamily domain THMIRHAT_21000 PF00072 Response regulator receiver domain THMIRHAT_21000 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_21000 PF00672 HAMP domain THMIRHAT_21000 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_21000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_21000 PF01627 Hpt domain THMIRHAT_21040 PF08534 Redoxin THMIRHAT_21040 PF00462 Glutaredoxin THMIRHAT_21050 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAT_21050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAT_21060 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAT_21090 PF07556 Protein of unknown function (DUF1538) THMIRHAT_21100 PF01725 Ham1 family THMIRHAT_21110 PF03755 YicC-like family, N-terminal region THMIRHAT_21110 PF08340 Domain of unknown function (DUF1732) THMIRHAT_21130 PF00905 Penicillin binding protein transpeptidase domain THMIRHAT_21130 PF00912 Transglycosylase THMIRHAT_21130 PF17092 Penicillin-binding protein OB-like domain THMIRHAT_21140 PF03881 Fructosamine kinase THMIRHAT_21150 PF05191 Adenylate kinase, active site lid THMIRHAT_21160 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21160 PF07694 5TMR of 5TMR-LYT THMIRHAT_21180 PF13472 GDSL-like Lipase/Acylhydrolase family THMIRHAT_21190 PF00005 ABC transporter THMIRHAT_21210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_21210 PF00672 HAMP domain THMIRHAT_21210 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_21210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_21210 PF00072 Response regulator receiver domain THMIRHAT_21210 PF01627 Hpt domain THMIRHAT_21290 PF00563 EAL domain THMIRHAT_21290 PF04940 Sensors of blue-light using FAD THMIRHAT_21310 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_21310 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21310 PF00563 EAL domain THMIRHAT_21320 PF12697 Alpha/beta hydrolase family THMIRHAT_21330 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21330 PF00072 Response regulator receiver domain THMIRHAT_21360 PF07728 AAA domain (dynein-related subfamily) THMIRHAT_21360 PF08406 CbbQ/NirQ/NorQ C-terminal THMIRHAT_21370 PF00101 Ribulose bisphosphate carboxylase, small chain THMIRHAT_21380 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THMIRHAT_21380 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THMIRHAT_21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAT_21390 PF03466 LysR substrate binding domain THMIRHAT_21400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_21400 PF08447 PAS fold THMIRHAT_21410 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_21410 PF00072 Response regulator receiver domain THMIRHAT_21420 PF09308 LuxQ, periplasmic THMIRHAT_21420 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_21420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_21420 PF00072 Response regulator receiver domain THMIRHAT_21440 PF00563 EAL domain THMIRHAT_21440 PF08495 FIST N domain THMIRHAT_21440 PF10442 FIST C domain THMIRHAT_21440 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21450 PF01590 GAF domain THMIRHAT_21450 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21450 PF00360 Phytochrome region THMIRHAT_21450 PF00563 EAL domain THMIRHAT_21470 PF07690 Major Facilitator Superfamily THMIRHAT_21480 PF00593 TonB dependent receptor THMIRHAT_21480 PF07715 TonB-dependent Receptor Plug Domain THMIRHAT_21520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_21520 PF09456 RcsC Alpha-Beta-Loop (ABL) THMIRHAT_21520 PF00072 Response regulator receiver domain THMIRHAT_21520 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_21540 PF00593 TonB dependent receptor THMIRHAT_21540 PF07715 TonB-dependent Receptor Plug Domain THMIRHAT_21570 PF08447 PAS fold THMIRHAT_21570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_21590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAT_21590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAT_21590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAT_21590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAT_21610 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21610 PF00563 EAL domain THMIRHAT_21610 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_21620 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_21620 PF00563 EAL domain THMIRHAT_21620 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_21640 PF00892 EamA-like transporter family THMIRHAT_21650 PF00753 Metallo-beta-lactamase superfamily THMIRHAT_21650 PF16123 Hydroxyacylglutathione hydrolase C-terminus THMIRHAT_21660 PF00892 EamA-like transporter family THMIRHAT_21670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family THMIRHAT_21690 PF04542 Sigma-70 region 2 THMIRHAT_21690 PF08281 Sigma-70, region 4 THMIRHAT_21740 PF03649 Uncharacterised protein family (UPF0014) THMIRHAT_21760 PF08212 Lipocalin-like domain THMIRHAT_21770 PF08713 DNA alkylation repair enzyme THMIRHAT_21780 PF00266 Aminotransferase class-V THMIRHAT_21790 PF01565 FAD binding domain THMIRHAT_21790 PF02913 FAD linked oxidases, C-terminal domain THMIRHAT_21800 PF01565 FAD binding domain THMIRHAT_21810 PF13183 4Fe-4S dicluster domain THMIRHAT_21810 PF02754 Cysteine-rich domain THMIRHAT_21820 PF01268 Formate--tetrahydrofolate ligase THMIRHAT_21830 PF02222 ATP-grasp domain THMIRHAT_21830 PF01370 NAD dependent epimerase/dehydratase family THMIRHAT_21860 PF04545 Sigma-70, region 4 THMIRHAT_21860 PF04542 Sigma-70 region 2 THMIRHAT_21860 PF00140 Sigma-70 factor, region 1.2 THMIRHAT_21880 PF03781 Sulfatase-modifying factor enzyme 1 THMIRHAT_21880 PF12867 DinB superfamily THMIRHAT_21890 PF00155 Aminotransferase class I and II THMIRHAT_21900 PF13416 Bacterial extracellular solute-binding protein THMIRHAT_21910 PF08402 TOBE domain THMIRHAT_21910 PF00005 ABC transporter THMIRHAT_21920 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_21930 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAT_21950 PF08769 Sporulation initiation factor Spo0A C terminal THMIRHAT_21950 PF00072 Response regulator receiver domain THMIRHAT_21960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_21960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_21960 PF00672 HAMP domain THMIRHAT_21960 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_21960 PF01627 Hpt domain THMIRHAT_21960 PF00072 Response regulator receiver domain THMIRHAT_21970 PF11849 Domain of unknown function (DUF3369) THMIRHAT_22020 PF01434 Peptidase family M41 THMIRHAT_22020 PF06480 FtsH Extracellular THMIRHAT_22020 PF17862 AAA+ lid domain THMIRHAT_22020 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_22080 PF02664 S-Ribosylhomocysteinase (LuxS) THMIRHAT_22090 PF01048 Phosphorylase superfamily THMIRHAT_22100 PF00672 HAMP domain THMIRHAT_22100 PF02203 Tar ligand binding domain homologue THMIRHAT_22100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_22110 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_22110 PF00563 EAL domain THMIRHAT_22110 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_22130 PF00563 EAL domain THMIRHAT_22130 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_22130 PF08448 PAS fold THMIRHAT_22150 PF08351 Domain of unknown function (DUF1726) THMIRHAT_22150 PF05127 Helicase THMIRHAT_22150 PF13718 GNAT acetyltransferase 2 THMIRHAT_22150 PF17176 tRNA-binding domain THMIRHAT_22160 PF01842 ACT domain THMIRHAT_22160 PF00551 Formyl transferase THMIRHAT_22170 PF00085 Thioredoxin THMIRHAT_22180 PF07497 Rho termination factor, RNA-binding domain THMIRHAT_22180 PF07498 Rho termination factor, N-terminal domain THMIRHAT_22180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAT_22190 PF01197 Ribosomal protein L31 THMIRHAT_22210 PF01208 Uroporphyrinogen decarboxylase (URO-D) THMIRHAT_22220 PF00075 RNase H THMIRHAT_22230 PF00128 Alpha amylase, catalytic domain THMIRHAT_22250 PF05166 YcgL domain THMIRHAT_22250 PF05116 Sucrose-6F-phosphate phosphohydrolase THMIRHAT_22260 PF00862 Sucrose synthase THMIRHAT_22260 PF00534 Glycosyl transferases group 1 THMIRHAT_22300 PF13614 AAA domain THMIRHAT_22350 PF00535 Glycosyl transferase family 2 THMIRHAT_22370 PF00535 Glycosyl transferase family 2 THMIRHAT_22380 PF13579 Glycosyl transferase 4-like domain THMIRHAT_22380 PF00534 Glycosyl transferases group 1 THMIRHAT_22390 PF16363 GDP-mannose 4,6 dehydratase THMIRHAT_22400 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THMIRHAT_22420 PF01370 NAD dependent epimerase/dehydratase family THMIRHAT_22430 PF00293 NUDIX domain THMIRHAT_22440 PF00483 Nucleotidyl transferase THMIRHAT_22440 PF01050 Mannose-6-phosphate isomerase THMIRHAT_22450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAT_22450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAT_22450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAT_22450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAT_22460 PF16363 GDP-mannose 4,6 dehydratase THMIRHAT_22470 PF02397 Bacterial sugar transferase THMIRHAT_22500 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_22500 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_22500 PF00563 EAL domain THMIRHAT_22530 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_22530 PF00072 Response regulator receiver domain THMIRHAT_22530 PF00672 HAMP domain THMIRHAT_22530 PF01627 Hpt domain THMIRHAT_22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_22530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAT_22710 PF03958 Bacterial type II/III secretion system short domain THMIRHAT_22710 PF00263 Bacterial type II and III secretion system protein THMIRHAT_22750 PF06480 FtsH Extracellular THMIRHAT_22750 PF01434 Peptidase family M41 THMIRHAT_22750 PF17862 AAA+ lid domain THMIRHAT_22750 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAT_22760 PF09820 Predicted AAA-ATPase THMIRHAT_22760 PF08011 PD-(D/E)XK nuclease superfamily THMIRHAT_22850 PF14659 Phage integrase, N-terminal SAM-like domain THMIRHAT_22850 PF00589 Phage integrase family THMIRHAT_23050 PF13356 Arm DNA-binding domain THMIRHAT_23050 PF00589 Phage integrase family THMIRHAT_23070 PF00717 Peptidase S24-like THMIRHAT_23090 PF08448 PAS fold THMIRHAT_23090 PF03705 CheR methyltransferase, all-alpha domain THMIRHAT_23090 PF01739 CheR methyltransferase, SAM binding domain THMIRHAT_23090 PF01339 CheB methylesterase THMIRHAT_23100 PF00563 EAL domain THMIRHAT_23100 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23100 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_23120 PF03109 ABC1 family THMIRHAT_23150 PF00360 Phytochrome region THMIRHAT_23150 PF01590 GAF domain THMIRHAT_23150 PF00563 EAL domain THMIRHAT_23150 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23170 PF00563 EAL domain THMIRHAT_23170 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23170 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_23180 PF11842 Domain of unknown function (DUF3362) THMIRHAT_23180 PF04055 Radical SAM superfamily THMIRHAT_23180 PF08497 Radical SAM N-terminal THMIRHAT_23190 PF00072 Response regulator receiver domain THMIRHAT_23190 PF09308 LuxQ, periplasmic THMIRHAT_23190 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_23190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_23230 PF14489 QueF-like protein THMIRHAT_23230 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term THMIRHAT_23270 PF05114 Protein of unknown function (DUF692) THMIRHAT_23280 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system THMIRHAT_23320 PF00873 AcrB/AcrD/AcrF family THMIRHAT_23330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAT_23330 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAT_23340 PF00563 EAL domain THMIRHAT_23340 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23340 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_23370 PF00563 EAL domain THMIRHAT_23370 PF03707 Bacterial signalling protein N terminal repeat THMIRHAT_23370 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin THMIRHAT_23400 PF01850 PIN domain THMIRHAT_23430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAT_23430 PF09308 LuxQ, periplasmic THMIRHAT_23430 PF00072 Response regulator receiver domain THMIRHAT_23430 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAT_23440 PF13426 PAS domain THMIRHAT_23440 PF08447 PAS fold THMIRHAT_23440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_23460 PF01584 CheW-like domain THMIRHAT_23470 PF00672 HAMP domain THMIRHAT_23470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_23470 PF02203 Tar ligand binding domain homologue THMIRHAT_23480 PF00486 Transcriptional regulatory protein, C terminal THMIRHAT_23480 PF00072 Response regulator receiver domain THMIRHAT_23500 PF01205 Uncharacterized protein family UPF0029 THMIRHAT_23500 PF09186 Domain of unknown function (DUF1949) THMIRHAT_23510 PF13784 Fic/DOC family N-terminal THMIRHAT_23510 PF02661 Fic/DOC family THMIRHAT_23520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_23520 PF08447 PAS fold THMIRHAT_23520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAT_23520 PF08447 PAS fold THMIRHAT_23530 PF00873 AcrB/AcrD/AcrF family THMIRHAT_23540 PF13533 Biotin-lipoyl like THMIRHAT_23550 PF01938 TRAM domain THMIRHAT_23550 PF05958 tRNA (Uracil-5-)-methyltransferase THMIRHAT_23560 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAT_23580 PF01926 50S ribosome-binding GTPase THMIRHAT_23580 PF12631 MnmE helical domain THMIRHAT_23580 PF10396 GTP-binding protein TrmE N-terminus THMIRHAT_23600 PF14849 YidC periplasmic domain THMIRHAT_23600 PF02096 60Kd inner membrane protein THMIRHAT_23610 PF00825 Ribonuclease P THMIRHAT_23620 PF00468 Ribosomal protein L34 THMIRHAT_23650 PF00873 AcrB/AcrD/AcrF family THMIRHAT_23730 PF01925 Sulfite exporter TauE/SafE