locus-tag class description HQN79_00005 PF08299 Bacterial dnaA protein helix-turn-helix HQN79_00005 PF11638 DnaA N-terminal domain HQN79_00005 PF00308 Bacterial dnaA protein HQN79_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HQN79_00010 PF02767 DNA polymerase III beta subunit, central domain HQN79_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HQN79_00015 PF16916 Dimerisation domain of Zinc Transporter HQN79_00015 PF01545 Cation efflux family HQN79_00020 PF02463 RecF/RecN/SMC N terminal domain HQN79_00030 PF18053 DNA gyrase B subunit insert domain HQN79_00030 PF00986 DNA gyrase B subunit, carboxyl terminus HQN79_00030 PF00204 DNA gyrase B HQN79_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_00030 PF01751 Toprim domain HQN79_00035 PF00485 Phosphoribulokinase / Uridine kinase family HQN79_00040 PF13244 Domain of unknown function (DUF4040) HQN79_00040 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HQN79_00040 PF00361 Proton-conducting membrane transporter HQN79_00040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQN79_00045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HQN79_00050 PF00361 Proton-conducting membrane transporter HQN79_00060 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HQN79_00065 PF03334 Na+/H+ antiporter subunit HQN79_00075 PF01479 S4 domain HQN79_00080 PF01218 Coproporphyrinogen III oxidase HQN79_00095 PF01300 Telomere recombination HQN79_00100 PF01636 Phosphotransferase enzyme family HQN79_00105 PF00476 DNA polymerase family A HQN79_00105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQN79_00105 PF01367 5'-3' exonuclease, C-terminal SAM fold HQN79_00105 PF01612 3'-5' exonuclease HQN79_00120 PF01926 50S ribosome-binding GTPase HQN79_00125 PF05140 ResB-like family HQN79_00130 PF01578 Cytochrome C assembly protein HQN79_00135 PF13462 Thioredoxin HQN79_00140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQN79_00140 PF00205 Thiamine pyrophosphate enzyme, central domain HQN79_00140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQN79_00150 PF00881 Nitroreductase family HQN79_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_00155 PF03466 LysR substrate binding domain HQN79_00165 PF01037 Lrp/AsnC ligand binding domain HQN79_00170 PF00682 HMGL-like HQN79_00170 PF08502 LeuA allosteric (dimerisation) domain HQN79_00175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HQN79_00175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HQN79_00180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HQN79_00180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HQN79_00185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HQN79_00205 PF00005 ABC transporter HQN79_00230 PF01894 Uncharacterised protein family UPF0047 HQN79_00240 PF01432 Peptidase family M3 HQN79_00260 PF08281 Sigma-70, region 4 HQN79_00260 PF04542 Sigma-70 region 2 HQN79_00280 PF00732 GMC oxidoreductase HQN79_00280 PF05199 GMC oxidoreductase HQN79_00305 PF00795 Carbon-nitrogen hydrolase HQN79_00310 PF00561 alpha/beta hydrolase fold HQN79_00320 PF00873 AcrB/AcrD/AcrF family HQN79_00325 PF13533 Biotin-lipoyl like HQN79_00335 PF04264 YceI-like domain HQN79_00340 PF01292 Prokaryotic cytochrome b561 HQN79_00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_00345 PF03466 LysR substrate binding domain HQN79_00355 PF01553 Acyltransferase HQN79_00355 PF00501 AMP-binding enzyme HQN79_00360 PF00583 Acetyltransferase (GNAT) family HQN79_00360 PF13380 CoA binding domain HQN79_00360 PF13607 Succinyl-CoA ligase like flavodoxin domain HQN79_00365 PF00850 Histone deacetylase domain HQN79_00375 PF07584 Aerotolerance regulator N-terminal HQN79_00375 PF13519 von Willebrand factor type A domain HQN79_00390 PF01882 Protein of unknown function DUF58 HQN79_00395 PF17863 AAA lid domain HQN79_00395 PF07726 ATPase family associated with various cellular activities (AAA) HQN79_00415 PF13847 Methyltransferase domain HQN79_00425 PF01223 DNA/RNA non-specific endonuclease HQN79_00430 PF13649 Methyltransferase domain HQN79_00435 PF00072 Response regulator receiver domain HQN79_00435 PF00990 Diguanylate cyclase, GGDEF domain HQN79_00440 PF08003 Protein of unknown function (DUF1698) HQN79_00460 PF01867 CRISPR associated protein Cas1 HQN79_00465 PF18019 HD domain HQN79_00470 PF09611 CRISPR-associated protein (Cas_Csy1) HQN79_00475 PF09614 CRISPR-associated protein (Cas_Csy2) HQN79_00480 PF09615 CRISPR-associated protein (Cas_Csy3) HQN79_00490 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HQN79_00490 PF03625 Domain of unknown function DUF302 HQN79_00510 PF04241 Protein of unknown function (DUF423) HQN79_00515 PF00072 Response regulator receiver domain HQN79_00520 PF05661 Protein of unknown function (DUF808) HQN79_00545 PF00581 Rhodanese-like domain HQN79_00550 PF07690 Major Facilitator Superfamily HQN79_00555 PF07726 ATPase family associated with various cellular activities (AAA) HQN79_00555 PF17863 AAA lid domain HQN79_00570 PF00092 von Willebrand factor type A domain HQN79_00590 PF00085 Thioredoxin HQN79_00615 PF00156 Phosphoribosyl transferase domain HQN79_00620 PF14698 Argininosuccinate lyase C-terminal HQN79_00620 PF00206 Lyase HQN79_00625 PF00085 Thioredoxin HQN79_00625 PF02683 Cytochrome C biogenesis protein transmembrane region HQN79_00625 PF11412 Disulphide bond corrector protein DsbC HQN79_00630 PF03900 Porphobilinogen deaminase, C-terminal domain HQN79_00630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HQN79_00635 PF02602 Uroporphyrinogen-III synthase HemD HQN79_00660 PF02253 Phospholipase A1 HQN79_00665 PF00175 Oxidoreductase NAD-binding domain HQN79_00670 PF03372 Endonuclease/Exonuclease/phosphatase family HQN79_00680 PF01842 ACT domain HQN79_00680 PF00551 Formyl transferase HQN79_00685 PF13718 GNAT acetyltransferase 2 HQN79_00685 PF05127 Helicase HQN79_00690 PF01641 SelR domain HQN79_00695 PF01266 FAD dependent oxidoreductase HQN79_00695 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HQN79_00705 PF08543 Phosphomethylpyrimidine kinase HQN79_00725 PF00462 Glutaredoxin HQN79_00725 PF08534 Redoxin HQN79_00730 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_00730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQN79_00745 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_00750 PF01488 Shikimate / quinate 5-dehydrogenase HQN79_00750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HQN79_00750 PF08501 Shikimate dehydrogenase substrate binding domain HQN79_00760 PF00490 Delta-aminolevulinic acid dehydratase HQN79_00780 PF04055 Radical SAM superfamily HQN79_00780 PF06463 Molybdenum Cofactor Synthesis C HQN79_00785 PF02597 ThiS family HQN79_00790 PF02391 MoaE protein HQN79_00795 PF03453 MoeA N-terminal region (domain I and II) HQN79_00795 PF03454 MoeA C-terminal region (domain IV) HQN79_00795 PF00994 Probable molybdopterin binding domain HQN79_00800 PF10417 C-terminal domain of 1-Cys peroxiredoxin HQN79_00800 PF00578 AhpC/TSA family HQN79_00805 PF13640 2OG-Fe(II) oxygenase superfamily HQN79_00805 PF18331 PKHD-type hydroxylase C-terminal domain HQN79_00810 PF01070 FMN-dependent dehydrogenase HQN79_00815 PF00593 TonB dependent receptor HQN79_00815 PF07715 TonB-dependent Receptor Plug Domain HQN79_00820 PF01967 MoaC family HQN79_00825 PF08448 PAS fold HQN79_00825 PF00990 Diguanylate cyclase, GGDEF domain HQN79_00825 PF00563 EAL domain HQN79_00840 PF00270 DEAD/DEAH box helicase HQN79_00840 PF03880 DbpA RNA binding domain HQN79_00840 PF00271 Helicase conserved C-terminal domain HQN79_00860 PF06082 Exopolysaccharide biosynthesis protein YbjH HQN79_00865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HQN79_00885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HQN79_00885 PF00270 DEAD/DEAH box helicase HQN79_00885 PF18074 Primosomal protein N C-terminal domain HQN79_00885 PF17764 3′ DNA-binding domain (3′BD) HQN79_00885 PF00271 Helicase conserved C-terminal domain HQN79_00890 PF08241 Methyltransferase domain HQN79_00895 PF00561 alpha/beta hydrolase fold HQN79_00905 PF01235 Sodium:alanine symporter family HQN79_00910 PF15887 Putative zinc-binding metallo-peptidase HQN79_00910 PF10005 zinc-ribbon domain HQN79_00920 PF14403 Circularly permuted ATP-grasp type 2 HQN79_00930 PF00155 Aminotransferase class I and II HQN79_00935 PF06968 Biotin and Thiamin Synthesis associated domain HQN79_00935 PF04055 Radical SAM superfamily HQN79_00940 PF00156 Phosphoribosyl transferase domain HQN79_00945 PF01545 Cation efflux family HQN79_00955 PF03190 Protein of unknown function, DUF255 HQN79_00960 PF00902 Sec-independent protein translocase protein (TatC) HQN79_00965 PF02416 mttA/Hcf106 family HQN79_00970 PF02416 mttA/Hcf106 family HQN79_00975 PF01230 HIT domain HQN79_00980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HQN79_00985 PF00977 Histidine biosynthesis protein HQN79_00990 PF00977 Histidine biosynthesis protein HQN79_00995 PF00117 Glutamine amidotransferase class-I HQN79_01000 PF00475 Imidazoleglycerol-phosphate dehydratase HQN79_01005 PF00115 Cytochrome C and Quinol oxidase polypeptide I HQN79_01020 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HQN79_01020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HQN79_01030 PF12801 4Fe-4S binding domain HQN79_01030 PF13746 4Fe-4S dicluster domain HQN79_01030 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HQN79_01040 PF00403 Heavy-metal-associated domain HQN79_01050 PF01734 Patatin-like phospholipase HQN79_01055 PF01230 HIT domain HQN79_01075 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01075 PF00563 EAL domain HQN79_01075 PF03707 Bacterial signalling protein N terminal repeat HQN79_01080 PF02580 D-Tyr-tRNA(Tyr) deacylase HQN79_01085 PF00561 alpha/beta hydrolase fold HQN79_01100 PF04143 Sulphur transport HQN79_01115 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01115 PF03707 Bacterial signalling protein N terminal repeat HQN79_01115 PF00563 EAL domain HQN79_01130 PF03350 Uncharacterized protein family, UPF0114 HQN79_01145 PF12724 Flavodoxin domain HQN79_01170 PF07152 YaeQ protein HQN79_01175 PF00390 Malic enzyme, N-terminal domain HQN79_01175 PF03949 Malic enzyme, NAD binding domain HQN79_01180 PF00072 Response regulator receiver domain HQN79_01180 PF00486 Transcriptional regulatory protein, C terminal HQN79_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_01185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_01185 PF08447 PAS fold HQN79_01185 PF08447 PAS fold HQN79_01190 PF03880 DbpA RNA binding domain HQN79_01190 PF00271 Helicase conserved C-terminal domain HQN79_01190 PF00270 DEAD/DEAH box helicase HQN79_01195 PF07152 YaeQ protein HQN79_01200 PF09905 DNA-binding protein VF530 HQN79_01220 PF02965 Vitamin B12 dependent methionine synthase, activation domain HQN79_01220 PF02607 B12 binding domain HQN79_01220 PF02310 B12 binding domain HQN79_01220 PF02574 Homocysteine S-methyltransferase HQN79_01220 PF00809 Pterin binding enzyme HQN79_01225 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01225 PF00072 Response regulator receiver domain HQN79_01230 PF05958 tRNA (Uracil-5-)-methyltransferase HQN79_01235 PF01925 Sulfite exporter TauE/SafE HQN79_01245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_01245 PF00672 HAMP domain HQN79_01245 PF02743 Cache domain HQN79_01265 PF01171 PP-loop family HQN79_01280 PF16200 C-terminal region of band_7 HQN79_01280 PF01145 SPFH domain / Band 7 family HQN79_01290 PF02386 Cation transport protein HQN79_01295 PF02080 TrkA-C domain HQN79_01295 PF02254 TrkA-N domain HQN79_01300 PF02954 Bacterial regulatory protein, Fis family HQN79_01300 PF00158 Sigma-54 interaction domain HQN79_01300 PF00072 Response regulator receiver domain HQN79_01305 PF00512 His Kinase A (phospho-acceptor) domain HQN79_01305 PF00989 PAS fold HQN79_01305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_01305 PF00672 HAMP domain HQN79_01315 PF01189 16S rRNA methyltransferase RsmB/F HQN79_01315 PF01029 NusB family HQN79_01320 PF00551 Formyl transferase HQN79_01320 PF02911 Formyl transferase, C-terminal domain HQN79_01325 PF01327 Polypeptide deformylase HQN79_01330 PF17782 DprA winged helix domain HQN79_01330 PF02481 DNA recombination-mediator protein A HQN79_01335 PF01751 Toprim domain HQN79_01335 PF01131 DNA topoisomerase HQN79_01335 PF13368 Topoisomerase C-terminal repeat HQN79_01340 PF00750 tRNA synthetases class I (R) HQN79_01340 PF05746 DALR anticodon binding domain HQN79_01340 PF03485 Arginyl tRNA synthetase N terminal domain HQN79_01350 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01360 PF13335 Magnesium chelatase, subunit ChlI C-terminal HQN79_01360 PF01078 Magnesium chelatase, subunit ChlI HQN79_01370 PF00082 Subtilase family HQN79_01375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQN79_01375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQN79_01385 PF00563 EAL domain HQN79_01385 PF03707 Bacterial signalling protein N terminal repeat HQN79_01385 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01395 PF00156 Phosphoribosyl transferase domain HQN79_01395 PF01738 Dienelactone hydrolase family HQN79_01400 PF05139 Erythromycin esterase HQN79_01400 PF00156 Phosphoribosyl transferase domain HQN79_01410 PF01996 F420-0:Gamma-glutamyl ligase HQN79_01410 PF00881 Nitroreductase family HQN79_01415 PF03448 MgtE intracellular N domain HQN79_01415 PF01769 Divalent cation transporter HQN79_01415 PF00571 CBS domain HQN79_01430 PF01384 Phosphate transporter family HQN79_01440 PF02769 AIR synthase related protein, C-terminal domain HQN79_01440 PF00586 AIR synthase related protein, N-terminal domain HQN79_01445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQN79_01445 PF00037 4Fe-4S binding domain HQN79_01445 PF02256 Iron hydrogenase small subunit HQN79_01445 PF02906 Iron only hydrogenase large subunit, C-terminal domain HQN79_01455 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_01455 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HQN79_01460 PF01493 GXGXG motif HQN79_01460 PF04898 Glutamate synthase central domain HQN79_01460 PF00310 Glutamine amidotransferases class-II HQN79_01460 PF01645 Conserved region in glutamate synthase HQN79_01465 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HQN79_01465 PF01676 Metalloenzyme superfamily HQN79_01475 PF00462 Glutaredoxin HQN79_01480 PF02556 Preprotein translocase subunit SecB HQN79_01485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HQN79_01485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HQN79_01490 PF00588 SpoU rRNA Methylase family HQN79_01495 PF01180 Dihydroorotate dehydrogenase HQN79_01500 PF00579 tRNA synthetases class I (W and Y) HQN79_01500 PF01479 S4 domain HQN79_01535 PF03309 Type III pantothenate kinase HQN79_01545 PF07977 FabA-like domain HQN79_01550 PF02801 Beta-ketoacyl synthase, C-terminal domain HQN79_01550 PF00109 Beta-ketoacyl synthase, N-terminal domain HQN79_01565 PF02881 SRP54-type protein, helical bundle domain HQN79_01565 PF00448 SRP54-type protein, GTPase domain HQN79_01570 PF00675 Insulinase (Peptidase family M16) HQN79_01570 PF05193 Peptidase M16 inactive domain HQN79_01575 PF05193 Peptidase M16 inactive domain HQN79_01585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_01585 PF03466 LysR substrate binding domain HQN79_01600 PF01467 Cytidylyltransferase-like HQN79_01605 PF10417 C-terminal domain of 1-Cys peroxiredoxin HQN79_01605 PF00578 AhpC/TSA family HQN79_01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_01620 PF03459 TOBE domain HQN79_01630 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_01640 PF06827 Zinc finger found in FPG and IleRS HQN79_01640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HQN79_01640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HQN79_01655 PF00471 Ribosomal protein L33 HQN79_01660 PF00830 Ribosomal L28 family HQN79_01675 PF04002 RadC-like JAB domain HQN79_01690 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HQN79_01690 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_01690 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQN79_01700 PF02441 Flavoprotein HQN79_01700 PF04127 DNA / pantothenate metabolism flavoprotein HQN79_01705 PF03315 Serine dehydratase beta chain HQN79_01705 PF03313 Serine dehydratase alpha chain HQN79_01710 PF13439 Glycosyltransferase Family 4 HQN79_01710 PF00534 Glycosyl transferases group 1 HQN79_01730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQN79_01730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQN79_01730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQN79_01730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQN79_01740 PF00692 dUTPase HQN79_01750 PF00690 Cation transporter/ATPase, N-terminus HQN79_01750 PF00689 Cation transporting ATPase, C-terminus HQN79_01760 PF00873 AcrB/AcrD/AcrF family HQN79_01765 PF00529 HlyD membrane-fusion protein of T1SS HQN79_01765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_01775 PF00155 Aminotransferase class I and II HQN79_01780 PF04461 Protein of unknown function (DUF520) HQN79_01785 PF00696 Amino acid kinase family HQN79_01790 PF05552 Conserved TM helix HQN79_01790 PF00924 Mechanosensitive ion channel HQN79_01800 PF00691 OmpA family HQN79_01810 PF00156 Phosphoribosyl transferase domain HQN79_01815 PF01261 Xylose isomerase-like TIM barrel HQN79_01825 PF00667 FAD binding domain HQN79_01825 PF00175 Oxidoreductase NAD-binding domain HQN79_01825 PF00258 Flavodoxin HQN79_01830 PF02541 Ppx/GppA phosphatase family HQN79_01835 PF13089 Polyphosphate kinase N-terminal domain HQN79_01835 PF17941 Polyphosphate kinase C-terminal domain 1 HQN79_01835 PF13090 Polyphosphate kinase C-terminal domain 2 HQN79_01835 PF02503 Polyphosphate kinase middle domain HQN79_01840 PF01809 Putative membrane protein insertion efficiency factor HQN79_01845 PF00990 Diguanylate cyclase, GGDEF domain HQN79_01845 PF03707 Bacterial signalling protein N terminal repeat HQN79_01845 PF00563 EAL domain HQN79_01855 PF01979 Amidohydrolase family HQN79_01860 PF00171 Aldehyde dehydrogenase family HQN79_01880 PF00202 Aminotransferase class-III HQN79_01885 PF00849 RNA pseudouridylate synthase HQN79_01910 PF00009 Elongation factor Tu GTP binding domain HQN79_01910 PF03144 Elongation factor Tu domain 2 HQN79_01910 PF03143 Elongation factor Tu C-terminal domain HQN79_01920 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HQN79_01925 PF02357 Transcription termination factor nusG HQN79_01925 PF00467 KOW motif HQN79_01930 PF03946 Ribosomal protein L11, N-terminal domain HQN79_01930 PF00298 Ribosomal protein L11, RNA binding domain HQN79_01935 PF00687 Ribosomal protein L1p/L10e family HQN79_01940 PF00466 Ribosomal protein L10 HQN79_01945 PF00542 Ribosomal protein L7/L12 C-terminal domain HQN79_01945 PF16320 Ribosomal protein L7/L12 dimerisation domain HQN79_01950 PF04565 RNA polymerase Rpb2, domain 3 HQN79_01950 PF04563 RNA polymerase beta subunit HQN79_01950 PF00562 RNA polymerase Rpb2, domain 6 HQN79_01950 PF04560 RNA polymerase Rpb2, domain 7 HQN79_01950 PF04561 RNA polymerase Rpb2, domain 2 HQN79_01950 PF10385 RNA polymerase beta subunit external 1 domain HQN79_01955 PF00623 RNA polymerase Rpb1, domain 2 HQN79_01955 PF05000 RNA polymerase Rpb1, domain 4 HQN79_01955 PF04997 RNA polymerase Rpb1, domain 1 HQN79_01955 PF04998 RNA polymerase Rpb1, domain 5 HQN79_01955 PF04983 RNA polymerase Rpb1, domain 3 HQN79_01960 PF00164 Ribosomal protein S12/S23 HQN79_01965 PF00177 Ribosomal protein S7p/S5e HQN79_01970 PF00679 Elongation factor G C-terminus HQN79_01970 PF14492 Elongation Factor G, domain II HQN79_01970 PF03144 Elongation factor Tu domain 2 HQN79_01970 PF03764 Elongation factor G, domain IV HQN79_01970 PF00009 Elongation factor Tu GTP binding domain HQN79_01975 PF00009 Elongation factor Tu GTP binding domain HQN79_01975 PF03143 Elongation factor Tu C-terminal domain HQN79_01975 PF03144 Elongation factor Tu domain 2 HQN79_01980 PF00338 Ribosomal protein S10p/S20e HQN79_01985 PF00297 Ribosomal protein L3 HQN79_01990 PF00573 Ribosomal protein L4/L1 family HQN79_01995 PF00276 Ribosomal protein L23 HQN79_02000 PF03947 Ribosomal Proteins L2, C-terminal domain HQN79_02000 PF00181 Ribosomal Proteins L2, RNA binding domain HQN79_02005 PF00203 Ribosomal protein S19 HQN79_02010 PF00237 Ribosomal protein L22p/L17e HQN79_02015 PF07650 KH domain HQN79_02015 PF00189 Ribosomal protein S3, C-terminal domain HQN79_02020 PF00252 Ribosomal protein L16p/L10e HQN79_02025 PF00831 Ribosomal L29 protein HQN79_02030 PF00366 Ribosomal protein S17 HQN79_02035 PF00238 Ribosomal protein L14p/L23e HQN79_02040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HQN79_02040 PF00467 KOW motif HQN79_02045 PF00673 ribosomal L5P family C-terminus HQN79_02045 PF00281 Ribosomal protein L5 HQN79_02050 PF00253 Ribosomal protein S14p/S29e HQN79_02055 PF00410 Ribosomal protein S8 HQN79_02060 PF00347 Ribosomal protein L6 HQN79_02065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HQN79_02070 PF00333 Ribosomal protein S5, N-terminal domain HQN79_02070 PF03719 Ribosomal protein S5, C-terminal domain HQN79_02075 PF00327 Ribosomal protein L30p/L7e HQN79_02080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HQN79_02085 PF00344 SecY translocase HQN79_02090 PF00416 Ribosomal protein S13/S18 HQN79_02095 PF00411 Ribosomal protein S11 HQN79_02100 PF00163 Ribosomal protein S4/S9 N-terminal domain HQN79_02100 PF01479 S4 domain HQN79_02105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HQN79_02105 PF01000 RNA polymerase Rpb3/RpoA insert domain HQN79_02105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HQN79_02110 PF01196 Ribosomal protein L17 HQN79_02115 PF01026 TatD related DNase HQN79_02120 PF00899 ThiF family HQN79_02130 PF00535 Glycosyl transferase family 2 HQN79_02135 PF17760 UvrA interaction domain HQN79_02135 PF17755 UvrA DNA-binding domain HQN79_02140 PF00563 EAL domain HQN79_02140 PF03707 Bacterial signalling protein N terminal repeat HQN79_02140 PF00990 Diguanylate cyclase, GGDEF domain HQN79_02150 PF07690 Major Facilitator Superfamily HQN79_02155 PF00436 Single-strand binding protein family HQN79_02165 PF00348 Polyprenyl synthetase HQN79_02170 PF00829 Ribosomal prokaryotic L21 protein HQN79_02175 PF01016 Ribosomal L27 protein HQN79_02180 PF01018 GTP1/OBG HQN79_02180 PF01926 50S ribosome-binding GTPase HQN79_02185 PF00696 Amino acid kinase family HQN79_02185 PF01472 PUA domain HQN79_02190 PF00990 Diguanylate cyclase, GGDEF domain HQN79_02195 PF00166 Chaperonin 10 Kd subunit HQN79_02200 PF00118 TCP-1/cpn60 chaperonin family HQN79_02215 PF01794 Ferric reductase like transmembrane component HQN79_02220 PF00174 Oxidoreductase molybdopterin binding domain HQN79_02225 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQN79_02225 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQN79_02230 PF01521 Iron-sulphur cluster biosynthesis HQN79_02235 PF00285 Citrate synthase, C-terminal domain HQN79_02240 PF00762 Ferrochelatase HQN79_02265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQN79_02265 PF00072 Response regulator receiver domain HQN79_02265 PF00672 HAMP domain HQN79_02265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_02265 PF01627 Hpt domain HQN79_02265 PF00512 His Kinase A (phospho-acceptor) domain HQN79_02270 PF01625 Peptide methionine sulfoxide reductase HQN79_02275 PF00578 AhpC/TSA family HQN79_02285 PF00106 short chain dehydrogenase HQN79_02305 PF00875 DNA photolyase HQN79_02305 PF03441 FAD binding domain of DNA photolyase HQN79_02310 PF13411 MerR HTH family regulatory protein HQN79_02315 PF13426 PAS domain HQN79_02315 PF01740 STAS domain HQN79_02320 PF01597 Glycine cleavage H-protein HQN79_02325 PF17785 PUA-like domain HQN79_02325 PF10672 S-adenosylmethionine-dependent methyltransferase HQN79_02335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HQN79_02335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQN79_02340 PF02230 Phospholipase/Carboxylesterase HQN79_02345 PF01243 Pyridoxamine 5'-phosphate oxidase HQN79_02360 PF07664 Ferrous iron transport protein B C terminus HQN79_02360 PF07670 Nucleoside recognition HQN79_02360 PF17910 FeoB cytosolic helical domain HQN79_02360 PF02421 Ferrous iron transport protein B HQN79_02370 PF00561 alpha/beta hydrolase fold HQN79_02370 PF07021 Methionine biosynthesis protein MetW HQN79_02375 PF00561 alpha/beta hydrolase fold HQN79_02380 PF02325 YGGT family HQN79_02385 PF03807 NADP oxidoreductase coenzyme F420-dependent HQN79_02385 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQN79_02395 PF01168 Alanine racemase, N-terminal domain HQN79_02400 PF03976 Polyphosphate kinase 2 (PPK2) HQN79_02420 PF01979 Amidohydrolase family HQN79_02425 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQN79_02425 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQN79_02430 PF00156 Phosphoribosyl transferase domain HQN79_02435 PF03652 Holliday junction resolvase HQN79_02440 PF02622 Uncharacterized ACR, COG1678 HQN79_02445 PF02424 ApbE family HQN79_02450 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HQN79_02450 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HQN79_02460 PF04452 RNA methyltransferase HQN79_02465 PF02219 Methylenetetrahydrofolate reductase HQN79_02470 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQN79_02470 PF02772 S-adenosylmethionine synthetase, central domain HQN79_02470 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQN79_02475 PF00990 Diguanylate cyclase, GGDEF domain HQN79_02475 PF08448 PAS fold HQN79_02475 PF00563 EAL domain HQN79_02485 PF00731 AIR carboxylase HQN79_02490 PF02222 ATP-grasp domain HQN79_02490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HQN79_02495 PF03853 YjeF-related protein N-terminus HQN79_02495 PF01256 Carbohydrate kinase HQN79_02505 PF02673 Bacitracin resistance protein BacA HQN79_02525 PF02152 Dihydroneopterin aldolase HQN79_02530 PF02660 Glycerol-3-phosphate acyltransferase HQN79_02535 PF00814 Glycoprotease family HQN79_02540 PF01165 Ribosomal protein S21 HQN79_02545 PF09424 Yqey-like protein HQN79_02550 PF01807 CHC2 zinc finger HQN79_02550 PF10410 DnaB-helicase binding domain of primase HQN79_02550 PF13662 Toprim domain HQN79_02550 PF08275 DNA primase catalytic core, N-terminal domain HQN79_02550 PF08278 DNA primase DnaG DnaB-binding HQN79_02555 PF04545 Sigma-70, region 4 HQN79_02555 PF04539 Sigma-70 region 3 HQN79_02555 PF04542 Sigma-70 region 2 HQN79_02555 PF00140 Sigma-70 factor, region 1.2 HQN79_02555 PF03979 Sigma-70 factor, region 1.1 HQN79_02555 PF04546 Sigma-70, non-essential region HQN79_02605 PF00572 Ribosomal protein L13 HQN79_02610 PF00380 Ribosomal protein S9/S16 HQN79_02615 PF00267 Gram-negative porin HQN79_02620 PF00267 Gram-negative porin HQN79_02650 PF00072 Response regulator receiver domain HQN79_02650 PF00486 Transcriptional regulatory protein, C terminal HQN79_02665 PF00919 Uncharacterized protein family UPF0004 HQN79_02665 PF04055 Radical SAM superfamily HQN79_02665 PF01938 TRAM domain HQN79_02670 PF02562 PhoH-like protein HQN79_02675 PF02130 Uncharacterized protein family UPF0054 HQN79_02680 PF03471 Transporter associated domain HQN79_02680 PF00571 CBS domain HQN79_02685 PF00795 Carbon-nitrogen hydrolase HQN79_02695 PF13603 Leucyl-tRNA synthetase, Domain 2 HQN79_02695 PF00133 tRNA synthetases class I (I, L, M and V) HQN79_02695 PF08264 Anticodon-binding domain of tRNA HQN79_02710 PF00171 Aldehyde dehydrogenase family HQN79_02715 PF01467 Cytidylyltransferase-like HQN79_02725 PF02590 Predicted SPOUT methyltransferase HQN79_02730 PF00691 OmpA family HQN79_02730 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQN79_02735 PF01618 MotA/TolQ/ExbB proton channel family HQN79_02740 PF01649 Ribosomal protein S20 HQN79_02745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQN79_02745 PF00205 Thiamine pyrophosphate enzyme, central domain HQN79_02745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQN79_02755 PF06574 FAD synthetase HQN79_02755 PF01687 Riboflavin kinase HQN79_02760 PF00133 tRNA synthetases class I (I, L, M and V) HQN79_02760 PF08264 Anticodon-binding domain of tRNA HQN79_02760 PF06827 Zinc finger found in FPG and IleRS HQN79_02765 PF01252 Signal peptidase (SPase) II HQN79_02780 PF13406 Transglycosylase SLT domain HQN79_02785 PF01170 Putative RNA methylase family UPF0020 HQN79_02785 PF02926 THUMP domain HQN79_02785 PF10672 S-adenosylmethionine-dependent methyltransferase HQN79_02790 PF06969 HemN C-terminal domain HQN79_02790 PF04055 Radical SAM superfamily HQN79_02800 PF02861 Clp amino terminal domain, pathogenicity island component HQN79_02800 PF10431 C-terminal, D2-small domain, of ClpB protein HQN79_02800 PF07724 AAA domain (Cdc48 subfamily) HQN79_02800 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_02800 PF17871 AAA lid domain HQN79_02805 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQN79_02805 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HQN79_02805 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_02820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQN79_02820 PF02843 Phosphoribosylglycinamide synthetase, C domain HQN79_02820 PF02844 Phosphoribosylglycinamide synthetase, N domain HQN79_02825 PF02142 MGS-like domain HQN79_02825 PF01808 AICARFT/IMPCHase bienzyme HQN79_02830 PF02954 Bacterial regulatory protein, Fis family HQN79_02835 PF01207 Dihydrouridine synthase (Dus) HQN79_02845 PF00289 Biotin carboxylase, N-terminal domain HQN79_02845 PF02785 Biotin carboxylase C-terminal domain HQN79_02845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQN79_02850 PF00364 Biotin-requiring enzyme HQN79_02855 PF01220 Dehydroquinase class II HQN79_02860 PF02683 Cytochrome C biogenesis protein transmembrane region HQN79_02860 PF11412 Disulphide bond corrector protein DsbC HQN79_02865 PF04186 FxsA cytoplasmic membrane protein HQN79_02875 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HQN79_02885 PF03625 Domain of unknown function DUF302 HQN79_02890 PF11890 Domain of unknown function (DUF3410) HQN79_02890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQN79_02890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQN79_02910 PF00873 AcrB/AcrD/AcrF family HQN79_02935 PF00263 Bacterial type II and III secretion system protein HQN79_02935 PF04972 BON domain HQN79_02935 PF13629 Pilus formation protein N terminal region HQN79_02940 PF13614 AAA domain HQN79_02945 PF00437 Type II/IV secretion system protein HQN79_02975 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_02980 PF00005 ABC transporter HQN79_02985 PF08753 NikR C terminal nickel binding domain HQN79_02985 PF01402 Ribbon-helix-helix protein, copG family HQN79_02995 PF09347 Domain of unknown function (DUF1989) HQN79_03000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQN79_03000 PF02785 Biotin carboxylase C-terminal domain HQN79_03000 PF00289 Biotin carboxylase, N-terminal domain HQN79_03005 PF01425 Amidase HQN79_03010 PF12706 Beta-lactamase superfamily domain HQN79_03015 PF02685 Glucokinase HQN79_03025 PF00120 Glutamine synthetase, catalytic domain HQN79_03030 PF02633 Creatinine amidohydrolase HQN79_03045 PF00753 Metallo-beta-lactamase superfamily HQN79_03055 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQN79_03065 PF13520 Amino acid permease HQN79_03075 PF12169 DNA polymerase III subunits gamma and tau domain III HQN79_03075 PF12170 DNA polymerase III tau subunit V interacting with alpha HQN79_03080 PF02575 YbaB/EbfC DNA-binding family HQN79_03085 PF13662 Toprim domain HQN79_03085 PF02132 RecR protein HQN79_03095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQN79_03095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQN79_03100 PF00202 Aminotransferase class-III HQN79_03105 PF01063 Amino-transferase class IV HQN79_03115 PF03279 Bacterial lipid A biosynthesis acyltransferase HQN79_03120 PF00005 ABC transporter HQN79_03120 PF00664 ABC transporter transmembrane region HQN79_03130 PF05159 Capsule polysaccharide biosynthesis protein HQN79_03150 PF01501 Glycosyl transferase family 8 HQN79_03165 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HQN79_03170 PF00535 Glycosyl transferase family 2 HQN79_03175 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HQN79_03190 PF02545 Maf-like protein HQN79_03195 PF10150 Ribonuclease E/G family HQN79_03195 PF00575 S1 RNA binding domain HQN79_03230 PF01471 Putative peptidoglycan binding domain HQN79_03230 PF13401 AAA domain HQN79_03235 PF00263 Bacterial type II and III secretion system protein HQN79_03235 PF03958 Bacterial type II/III secretion system short domain HQN79_03245 PF00437 Type II/IV secretion system protein HQN79_03270 PF02646 RmuC family HQN79_03285 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HQN79_03290 PF04055 Radical SAM superfamily HQN79_03300 PF00152 tRNA synthetases class II (D, K and N) HQN79_03305 PF00578 AhpC/TSA family HQN79_03310 PF02798 Glutathione S-transferase, N-terminal domain HQN79_03310 PF00043 Glutathione S-transferase, C-terminal domain HQN79_03315 PF04386 Stringent starvation protein B HQN79_03330 PF08544 GHMP kinases C terminal HQN79_03330 PF00288 GHMP kinases N terminal domain HQN79_03335 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HQN79_03335 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HQN79_03340 PF01070 FMN-dependent dehydrogenase HQN79_03350 PF05698 Bacterial trigger factor protein (TF) C-terminus HQN79_03360 PF04011 LemA family HQN79_03365 PF01435 Peptidase family M48 HQN79_03375 PF13439 Glycosyltransferase Family 4 HQN79_03375 PF00534 Glycosyl transferases group 1 HQN79_03385 PF01219 Prokaryotic diacylglycerol kinase HQN79_03390 PF01292 Prokaryotic cytochrome b561 HQN79_03405 PF00849 RNA pseudouridylate synthase HQN79_03405 PF01479 S4 domain HQN79_03425 PF13361 UvrD-like helicase C-terminal domain HQN79_03425 PF00580 UvrD/REP helicase N-terminal domain HQN79_03425 PF12705 PD-(D/E)XK nuclease superfamily HQN79_03430 PF02390 Putative methyltransferase HQN79_03435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HQN79_03435 PF02896 PEP-utilising enzyme, TIM barrel domain HQN79_03435 PF00391 PEP-utilising enzyme, mobile domain HQN79_03440 PF02021 Uncharacterised protein family UPF0102 HQN79_03445 PF04348 LppC putative lipoprotein HQN79_03450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQN79_03460 PF04445 Putative SAM-dependent methyltransferase HQN79_03475 PF02381 MraZ protein, putative antitoxin-like HQN79_03480 PF01795 MraW methylase family HQN79_03485 PF12327 FtsZ family, C-terminal domain HQN79_03485 PF00091 Tubulin/FtsZ family, GTPase domain HQN79_03495 PF00905 Penicillin binding protein transpeptidase domain HQN79_03495 PF03717 Penicillin-binding Protein dimerisation domain HQN79_03500 PF01225 Mur ligase family, catalytic domain HQN79_03500 PF02875 Mur ligase family, glutamate ligase domain HQN79_03500 PF08245 Mur ligase middle domain HQN79_03505 PF08245 Mur ligase middle domain HQN79_03505 PF01225 Mur ligase family, catalytic domain HQN79_03505 PF02875 Mur ligase family, glutamate ligase domain HQN79_03510 PF00953 Glycosyl transferase family 4 HQN79_03515 PF02875 Mur ligase family, glutamate ligase domain HQN79_03515 PF08245 Mur ligase middle domain HQN79_03520 PF01098 Cell cycle protein HQN79_03525 PF03033 Glycosyltransferase family 28 N-terminal domain HQN79_03525 PF04101 Glycosyltransferase family 28 C-terminal domain HQN79_03535 PF02743 Cache domain HQN79_03535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_03535 PF00672 HAMP domain HQN79_03540 PF01790 Prolipoprotein diacylglyceryl transferase HQN79_03545 PF00303 Thymidylate synthase HQN79_03550 PF00186 Dihydrofolate reductase HQN79_03555 PF00672 HAMP domain HQN79_03555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_03555 PF02203 Tar ligand binding domain homologue HQN79_03560 PF00950 ABC 3 transport family HQN79_03565 PF00005 ABC transporter HQN79_03580 PF01458 Uncharacterized protein family (UPF0051) HQN79_03585 PF00005 ABC transporter HQN79_03590 PF01458 Uncharacterized protein family (UPF0051) HQN79_03595 PF00266 Aminotransferase class-V HQN79_03605 PF02321 Outer membrane efflux protein HQN79_03615 PF02687 FtsX-like permease family HQN79_03615 PF12704 MacB-like periplasmic core domain HQN79_03615 PF00005 ABC transporter HQN79_03620 PF02687 FtsX-like permease family HQN79_03620 PF00005 ABC transporter HQN79_03620 PF12704 MacB-like periplasmic core domain HQN79_03625 PF01225 Mur ligase family, catalytic domain HQN79_03625 PF08245 Mur ligase middle domain HQN79_03625 PF02875 Mur ligase family, glutamate ligase domain HQN79_03630 PF07478 D-ala D-ala ligase C-terminus HQN79_03630 PF01820 D-ala D-ala ligase N-terminus HQN79_03635 PF08478 POTRA domain, FtsQ-type HQN79_03635 PF03799 Cell division protein FtsQ HQN79_03640 PF02491 SHS2 domain inserted in FTSA HQN79_03645 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HQN79_03655 PF02810 SEC-C motif HQN79_03655 PF07517 SecA DEAD-like domain HQN79_03655 PF07516 SecA Wing and Scaffold domain HQN79_03655 PF01043 SecA preprotein cross-linking domain HQN79_03660 PF01960 ArgJ family HQN79_03665 PF00155 Aminotransferase class I and II HQN79_03670 PF02581 Thiamine monophosphate synthase HQN79_03710 PF00106 short chain dehydrogenase HQN79_03715 PF00085 Thioredoxin HQN79_03720 PF00266 Aminotransferase class-V HQN79_03725 PF01565 FAD binding domain HQN79_03725 PF02913 FAD linked oxidases, C-terminal domain HQN79_03730 PF01565 FAD binding domain HQN79_03735 PF13183 4Fe-4S dicluster domain HQN79_03735 PF02754 Cysteine-rich domain HQN79_03740 PF01268 Formate--tetrahydrofolate ligase HQN79_03745 PF03707 Bacterial signalling protein N terminal repeat HQN79_03745 PF00990 Diguanylate cyclase, GGDEF domain HQN79_03745 PF00563 EAL domain HQN79_03750 PF03480 Bacterial extracellular solute-binding protein, family 7 HQN79_03765 PF01121 Dephospho-CoA kinase HQN79_03770 PF13537 Glutamine amidotransferase domain HQN79_03770 PF00733 Asparagine synthase HQN79_03775 PF00462 Glutaredoxin HQN79_03780 PF00929 Exonuclease HQN79_03785 PF00696 Amino acid kinase family HQN79_03785 PF00583 Acetyltransferase (GNAT) family HQN79_03790 PF00920 Dehydratase family HQN79_03820 PF01435 Peptidase family M48 HQN79_03830 PF13686 DsrE/DsrF/DrsH-like family HQN79_03835 PF01066 CDP-alcohol phosphatidyltransferase HQN79_03840 PF00682 HMGL-like HQN79_03840 PF08502 LeuA allosteric (dimerisation) domain HQN79_03850 PF00583 Acetyltransferase (GNAT) family HQN79_03855 PF00459 Inositol monophosphatase family HQN79_03860 PF00588 SpoU rRNA Methylase family HQN79_03865 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_03870 PF02082 Transcriptional regulator HQN79_03875 PF01521 Iron-sulphur cluster biosynthesis HQN79_03880 PF00334 Nucleoside diphosphate kinase HQN79_03885 PF04055 Radical SAM superfamily HQN79_03895 PF13393 Histidyl-tRNA synthetase HQN79_03895 PF03129 Anticodon binding domain HQN79_03905 PF13360 PQQ-like domain HQN79_03910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HQN79_03910 PF01926 50S ribosome-binding GTPase HQN79_03920 PF00034 Cytochrome c HQN79_03925 PF00034 Cytochrome c HQN79_03935 PF03193 RsgA GTPase HQN79_03940 PF01329 Pterin 4 alpha carbinolamine dehydratase HQN79_03950 PF00929 Exonuclease HQN79_03955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQN79_03955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQN79_03955 PF00205 Thiamine pyrophosphate enzyme, central domain HQN79_03960 PF10369 Small subunit of acetolactate synthase HQN79_03965 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HQN79_03965 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HQN79_03980 PF00892 EamA-like transporter family HQN79_04000 PF08447 PAS fold HQN79_04000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_04035 PF01966 HD domain HQN79_04035 PF01966 HD domain HQN79_04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_04050 PF03466 LysR substrate binding domain HQN79_04060 PF02525 Flavodoxin-like fold HQN79_04065 PF02678 Pirin HQN79_04065 PF05726 Pirin C-terminal cupin domain HQN79_04070 PF00034 Cytochrome c HQN79_04075 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQN79_04075 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_04075 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HQN79_04105 PF04973 Nicotinamide mononucleotide transporter HQN79_04135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQN79_04135 PF02824 TGS domain HQN79_04135 PF03129 Anticodon binding domain HQN79_04135 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQN79_04140 PF00707 Translation initiation factor IF-3, C-terminal domain HQN79_04140 PF05198 Translation initiation factor IF-3, N-terminal domain HQN79_04145 PF01632 Ribosomal protein L35 HQN79_04150 PF00453 Ribosomal protein L20 HQN79_04155 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HQN79_04155 PF01409 tRNA synthetases class II core domain (F) HQN79_04160 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HQN79_04160 PF03484 tRNA synthetase B5 domain HQN79_04160 PF01588 Putative tRNA binding domain HQN79_04160 PF03147 Ferredoxin-fold anticodon binding domain HQN79_04160 PF03483 B3/4 domain HQN79_04165 PF00216 Bacterial DNA-binding protein HQN79_04205 PF00005 ABC transporter HQN79_04210 PF13472 GDSL-like Lipase/Acylhydrolase family HQN79_04220 PF02190 ATP-dependent protease La (LON) substrate-binding domain HQN79_04220 PF05362 Lon protease (S16) C-terminal proteolytic domain HQN79_04220 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_04225 PF00994 Probable molybdopterin binding domain HQN79_04230 PF05175 Methyltransferase small domain HQN79_04235 PF00194 Eukaryotic-type carbonic anhydrase HQN79_04245 PF01264 Chorismate synthase HQN79_04250 PF12832 MFS_1 like family HQN79_04255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQN79_04260 PF06865 Pyrimidine/purine nucleoside phosphorylase HQN79_04265 PF00916 Sulfate permease family HQN79_04265 PF01740 STAS domain HQN79_04270 PF00529 HlyD membrane-fusion protein of T1SS HQN79_04270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_04275 PF00873 AcrB/AcrD/AcrF family HQN79_04290 PF00950 ABC 3 transport family HQN79_04295 PF00950 ABC 3 transport family HQN79_04300 PF00005 ABC transporter HQN79_04305 PF01297 Zinc-uptake complex component A periplasmic HQN79_04310 PF01177 Asp/Glu/Hydantoin racemase HQN79_04320 PF08267 Cobalamin-independent synthase, N-terminal domain HQN79_04320 PF01717 Cobalamin-independent synthase, Catalytic domain HQN79_04325 PF03466 LysR substrate binding domain HQN79_04325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_04330 PF01938 TRAM domain HQN79_04330 PF05958 tRNA (Uracil-5-)-methyltransferase HQN79_04340 PF00330 Aconitase family (aconitate hydratase) HQN79_04345 PF00694 Aconitase C-terminal domain HQN79_04350 PF00180 Isocitrate/isopropylmalate dehydrogenase HQN79_04355 PF01551 Peptidase family M23 HQN79_04365 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQN79_04365 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQN79_04370 PF01416 tRNA pseudouridine synthase HQN79_04375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HQN79_04380 PF00291 Pyridoxal-phosphate dependent enzyme HQN79_04385 PF00290 Tryptophan synthase alpha chain HQN79_04390 PF17848 Acetyl-coA carboxylase zinc finger domain HQN79_04390 PF01039 Carboxyl transferase domain HQN79_04395 PF08245 Mur ligase middle domain HQN79_04395 PF02875 Mur ligase family, glutamate ligase domain HQN79_04405 PF00156 Phosphoribosyl transferase domain HQN79_04410 PF01053 Cys/Met metabolism PLP-dependent enzyme HQN79_04415 PF01985 CRS1 / YhbY (CRM) domain HQN79_04420 PF01728 FtsJ-like methyltransferase HQN79_04425 PF01434 Peptidase family M41 HQN79_04425 PF06480 FtsH Extracellular HQN79_04425 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_04425 PF17862 AAA+ lid domain HQN79_04430 PF00809 Pterin binding enzyme HQN79_04435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQN79_04435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQN79_04435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQN79_04435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQN79_04440 PF00121 Triosephosphate isomerase HQN79_04445 PF03840 Preprotein translocase SecG subunit HQN79_04455 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HQN79_04460 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HQN79_04465 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HQN79_04470 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HQN79_04480 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HQN79_04480 PF10531 SLBB domain HQN79_04480 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HQN79_04485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HQN79_04485 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HQN79_04485 PF00384 Molybdopterin oxidoreductase HQN79_04490 PF00146 NADH dehydrogenase HQN79_04495 PF12838 4Fe-4S dicluster domain HQN79_04500 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HQN79_04505 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HQN79_04510 PF00361 Proton-conducting membrane transporter HQN79_04510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQN79_04515 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HQN79_04515 PF00361 Proton-conducting membrane transporter HQN79_04520 PF00361 Proton-conducting membrane transporter HQN79_04530 PF13361 UvrD-like helicase C-terminal domain HQN79_04530 PF00580 UvrD/REP helicase N-terminal domain HQN79_04530 PF12462 DNA helicase IV / RNA helicase N terminal HQN79_04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_04540 PF13426 PAS domain HQN79_04540 PF08447 PAS fold HQN79_04545 PF10996 Beta-Casp domain HQN79_04545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQN79_04545 PF00753 Metallo-beta-lactamase superfamily HQN79_04555 PF00990 Diguanylate cyclase, GGDEF domain HQN79_04555 PF00563 EAL domain HQN79_04555 PF03707 Bacterial signalling protein N terminal repeat HQN79_04560 PF00990 Diguanylate cyclase, GGDEF domain HQN79_04590 PF03062 MBOAT, membrane-bound O-acyltransferase family HQN79_04595 PF00535 Glycosyl transferase family 2 HQN79_04595 PF03552 Cellulose synthase HQN79_04595 PF07238 PilZ domain HQN79_04630 PF00589 Phage integrase family HQN79_04640 PF01555 DNA methylase HQN79_04665 PF00589 Phage integrase family HQN79_04685 PF00849 RNA pseudouridylate synthase HQN79_04690 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQN79_04695 PF00575 S1 RNA binding domain HQN79_04695 PF10150 Ribonuclease E/G family HQN79_04695 PF12111 Polyribonucleotide phosphorylase C terminal HQN79_04700 PF00849 RNA pseudouridylate synthase HQN79_04700 PF01479 S4 domain HQN79_04705 PF13419 Haloacid dehalogenase-like hydrolase HQN79_04710 PF02545 Maf-like protein HQN79_04715 PF02620 Large ribosomal RNA subunit accumulation protein YceD HQN79_04720 PF01783 Ribosomal L32p protein family HQN79_04725 PF02504 Fatty acid synthesis protein HQN79_04730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQN79_04730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQN79_04735 PF00698 Acyl transferase domain HQN79_04745 PF00550 Phosphopantetheine attachment site HQN79_04750 PF02801 Beta-ketoacyl synthase, C-terminal domain HQN79_04750 PF00109 Beta-ketoacyl synthase, N-terminal domain HQN79_04755 PF00425 chorismate binding enzyme HQN79_04755 PF04715 Anthranilate synthase component I, N terminal region HQN79_04760 PF01063 Amino-transferase class IV HQN79_04765 PF02618 YceG-like family HQN79_04770 PF02223 Thymidylate kinase HQN79_04775 PF09115 DNA polymerase III, delta subunit, C terminal HQN79_04780 PF01026 TatD related DNase HQN79_04805 PF00990 Diguanylate cyclase, GGDEF domain HQN79_04805 PF00072 Response regulator receiver domain HQN79_04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_04810 PF08447 PAS fold HQN79_04810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_04810 PF08447 PAS fold HQN79_04825 PF00563 EAL domain HQN79_04825 PF00990 Diguanylate cyclase, GGDEF domain HQN79_04825 PF03707 Bacterial signalling protein N terminal repeat HQN79_04850 PF06545 Protein of unknown function (DUF1116) HQN79_04855 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_04860 PF00005 ABC transporter HQN79_04865 PF00111 2Fe-2S iron-sulfur cluster binding domain HQN79_04875 PF14759 Reductase C-terminal HQN79_04875 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_04880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_04880 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQN79_04880 PF16886 ATPsynthase alpha/beta subunit N-term extension HQN79_04905 PF01813 ATP synthase subunit D HQN79_04910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_04910 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQN79_04965 PF00589 Phage integrase family HQN79_04965 PF13356 Arm DNA-binding domain HQN79_04975 PF08448 PAS fold HQN79_04975 PF00990 Diguanylate cyclase, GGDEF domain HQN79_04980 PF01668 SmpB protein HQN79_04990 PF03364 Polyketide cyclase / dehydrase and lipid transport HQN79_04995 PF03658 RnfH family Ubiquitin HQN79_05005 PF01475 Ferric uptake regulator family HQN79_05010 PF02463 RecF/RecN/SMC N terminal domain HQN79_05015 PF01513 ATP-NAD kinase HQN79_05020 PF01628 HrcA protein C terminal domain HQN79_05020 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HQN79_05025 PF01025 GrpE HQN79_05030 PF00012 Hsp70 protein HQN79_05035 PF00226 DnaJ domain HQN79_05035 PF00684 DnaJ central domain HQN79_05035 PF01556 DnaJ C terminal domain HQN79_05040 PF01113 Dihydrodipicolinate reductase, N-terminus HQN79_05040 PF05173 Dihydrodipicolinate reductase, C-terminus HQN79_05045 PF00877 NlpC/P60 family HQN79_05050 PF00117 Glutamine amidotransferase class-I HQN79_05050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQN79_05055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQN79_05055 PF02142 MGS-like domain HQN79_05055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQN79_05060 PF01272 Transcription elongation factor, GreA/GreB, C-term HQN79_05060 PF03449 Transcription elongation factor, N-terminal HQN79_05070 PF04305 Protein of unknown function (DUF455) HQN79_05075 PF00480 ROK family HQN79_05085 PF00106 short chain dehydrogenase HQN79_05090 PF00085 Thioredoxin HQN79_05095 PF10415 Fumarase C C-terminus HQN79_05095 PF00206 Lyase HQN79_05100 PF00196 Bacterial regulatory proteins, luxR family HQN79_05100 PF00072 Response regulator receiver domain HQN79_05115 PF00152 tRNA synthetases class II (D, K and N) HQN79_05115 PF01336 OB-fold nucleic acid binding domain HQN79_05120 PF01571 Aminomethyltransferase folate-binding domain HQN79_05125 PF01584 CheW-like domain HQN79_05130 PF00890 FAD binding domain HQN79_05130 PF02910 Fumarate reductase flavoprotein C-term HQN79_05140 PF13180 PDZ domain HQN79_05145 PF00679 Elongation factor G C-terminus HQN79_05145 PF06421 GTP-binding protein LepA C-terminus HQN79_05145 PF00009 Elongation factor Tu GTP binding domain HQN79_05145 PF03144 Elongation factor Tu domain 2 HQN79_05150 PF10502 Signal peptidase, peptidase S26 HQN79_05155 PF00035 Double-stranded RNA binding motif HQN79_05155 PF14622 Ribonuclease-III-like HQN79_05160 PF01926 50S ribosome-binding GTPase HQN79_05160 PF07650 KH domain HQN79_05165 PF02565 Recombination protein O C terminal HQN79_05165 PF11967 Recombination protein O N terminal HQN79_05170 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HQN79_05175 PF01648 4'-phosphopantetheinyl transferase superfamily HQN79_05185 PF00990 Diguanylate cyclase, GGDEF domain HQN79_05185 PF00563 EAL domain HQN79_05185 PF03707 Bacterial signalling protein N terminal repeat HQN79_05195 PF01758 Sodium Bile acid symporter family HQN79_05205 PF03449 Transcription elongation factor, N-terminal HQN79_05205 PF01272 Transcription elongation factor, GreA/GreB, C-term HQN79_05210 PF13472 GDSL-like Lipase/Acylhydrolase family HQN79_05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_05225 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HQN79_05230 PF02277 Phosphoribosyltransferase HQN79_05240 PF02654 Cobalamin-5-phosphate synthase HQN79_05245 PF00291 Pyridoxal-phosphate dependent enzyme HQN79_05250 PF00909 Ammonium Transporter Family HQN79_05255 PF13654 AAA domain HQN79_05255 PF05362 Lon protease (S16) C-terminal proteolytic domain HQN79_05265 PF03772 Competence protein HQN79_05265 PF00753 Metallo-beta-lactamase superfamily HQN79_05265 PF13567 Domain of unknown function (DUF4131) HQN79_05270 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HQN79_05275 PF03966 Trm112p-like protein HQN79_05280 PF02348 Cytidylyltransferase HQN79_05290 PF12823 Domain of unknown function (DUF3817) HQN79_05295 PF01497 Periplasmic binding protein HQN79_05300 PF03186 CobD/Cbib protein HQN79_05305 PF00155 Aminotransferase class I and II HQN79_05305 PF00815 Histidinol dehydrogenase HQN79_05310 PF12557 Cob(I)alamin adenosyltransferase N terminal HQN79_05310 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HQN79_05315 PF12795 Mechanosensitive ion channel porin domain HQN79_05315 PF00924 Mechanosensitive ion channel HQN79_05315 PF12794 Mechanosensitive ion channel inner membrane domain 1 HQN79_05325 PF00990 Diguanylate cyclase, GGDEF domain HQN79_05330 PF07685 CobB/CobQ-like glutamine amidotransferase domain HQN79_05330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HQN79_05335 PF07715 TonB-dependent Receptor Plug Domain HQN79_05335 PF00593 TonB dependent receptor HQN79_05345 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HQN79_05350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQN79_05350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQN79_05360 PF05992 SbmA/BacA-like family HQN79_05365 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQN79_05365 PF05491 RuvB C-terminal winged helix domain HQN79_05365 PF17864 RuvB AAA lid domain HQN79_05375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HQN79_05375 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQN79_05390 PF01810 LysE type translocator HQN79_05400 PF00313 'Cold-shock' DNA-binding domain HQN79_05405 PF00156 Phosphoribosyl transferase domain HQN79_05410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_05415 PF00005 ABC transporter HQN79_05450 PF00082 Subtilase family HQN79_05450 PF04151 Bacterial pre-peptidase C-terminal domain HQN79_05455 PF00075 RNase H HQN79_05465 PF00730 HhH-GPD superfamily base excision DNA repair protein HQN79_05465 PF00633 Helix-hairpin-helix motif HQN79_05465 PF10576 Iron-sulfur binding domain of endonuclease III HQN79_05475 PF02508 Rnf-Nqr subunit, membrane protein HQN79_05480 PF04205 FMN-binding domain HQN79_05485 PF03116 NQR2, RnfD, RnfE family HQN79_05490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HQN79_05490 PF13375 RnfC Barrel sandwich hybrid domain HQN79_05490 PF12838 4Fe-4S dicluster domain HQN79_05490 PF10531 SLBB domain HQN79_05495 PF04060 Putative Fe-S cluster HQN79_05500 PF02508 Rnf-Nqr subunit, membrane protein HQN79_05505 PF09334 tRNA synthetases class I (M) HQN79_05505 PF01588 Putative tRNA binding domain HQN79_05510 PF10609 NUBPL iron-transfer P-loop NTPase HQN79_05515 PF01119 DNA mismatch repair protein, C-terminal domain HQN79_05515 PF08676 MutL C terminal dimerisation domain HQN79_05525 PF17209 Hfq protein HQN79_05530 PF16360 GTP-binding GTPase Middle Region HQN79_05530 PF13167 GTP-binding GTPase N-terminal HQN79_05530 PF01926 50S ribosome-binding GTPase HQN79_05535 PF01145 SPFH domain / Band 7 family HQN79_05540 PF01145 SPFH domain / Band 7 family HQN79_05550 PF13393 Histidyl-tRNA synthetase HQN79_05555 PF00709 Adenylosuccinate synthetase HQN79_05560 PF13145 PPIC-type PPIASE domain HQN79_05570 PF04356 Protein of unknown function (DUF489) HQN79_05580 PF00849 RNA pseudouridylate synthase HQN79_05585 PF03971 Monomeric isocitrate dehydrogenase HQN79_05595 PF01709 Transcriptional regulator HQN79_05600 PF08274 PhnA Zinc-Ribbon HQN79_05600 PF03831 PhnA domain HQN79_05605 PF00226 DnaJ domain HQN79_05605 PF01556 DnaJ C terminal domain HQN79_05610 PF02617 ATP-dependent Clp protease adaptor protein ClpS HQN79_05615 PF17871 AAA lid domain HQN79_05615 PF02861 Clp amino terminal domain, pathogenicity island component HQN79_05615 PF10431 C-terminal, D2-small domain, of ClpB protein HQN79_05615 PF07724 AAA domain (Cdc48 subfamily) HQN79_05615 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_05620 PF01176 Translation initiation factor 1A / IF-1 HQN79_05630 PF13085 2Fe-2S iron-sulfur cluster binding domain HQN79_05635 PF00890 FAD binding domain HQN79_05635 PF02910 Fumarate reductase flavoprotein C-term HQN79_05650 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HQN79_05655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQN79_05655 PF02811 PHP domain HQN79_05655 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQN79_05655 PF01336 OB-fold nucleic acid binding domain HQN79_05655 PF14579 Helix-hairpin-helix motif HQN79_05660 PF13193 AMP-binding enzyme C-terminal domain HQN79_05660 PF00501 AMP-binding enzyme HQN79_05660 PF16177 Acetyl-coenzyme A synthetase N-terminus HQN79_05670 PF00474 Sodium:solute symporter family HQN79_05680 PF00929 Exonuclease HQN79_05685 PF02576 RimP N-terminal domain HQN79_05685 PF17384 RimP C-terminal SH3 domain HQN79_05690 PF08529 NusA N-terminal domain HQN79_05690 PF00575 S1 RNA binding domain HQN79_05690 PF13184 NusA-like KH domain HQN79_05695 PF04760 Translation initiation factor IF-2, N-terminal region HQN79_05695 PF00009 Elongation factor Tu GTP binding domain HQN79_05695 PF11987 Translation-initiation factor 2 HQN79_05695 PF08364 Bacterial translation initiation factor IF-2 associated region HQN79_05700 PF02033 Ribosome-binding factor A HQN79_05705 PF01509 TruB family pseudouridylate synthase (N terminal domain) HQN79_05705 PF16198 tRNA pseudouridylate synthase B C-terminal domain HQN79_05705 PF09157 Pseudouridine synthase II TruB, C-terminal HQN79_05710 PF03848 Tellurite resistance protein TehB HQN79_05720 PF00312 Ribosomal protein S15 HQN79_05730 PF00575 S1 RNA binding domain HQN79_05730 PF03725 3' exoribonuclease family, domain 2 HQN79_05730 PF01138 3' exoribonuclease family, domain 1 HQN79_05730 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HQN79_05730 PF00013 KH domain HQN79_05735 PF05193 Peptidase M16 inactive domain HQN79_05735 PF00675 Insulinase (Peptidase family M16) HQN79_05735 PF08367 Peptidase M16C associated HQN79_05740 PF12792 CSS motif domain associated with EAL HQN79_05740 PF00563 EAL domain HQN79_05760 PF08007 Cupin superfamily protein HQN79_05770 PF08328 Adenylosuccinate lyase C-terminal HQN79_05770 PF00206 Lyase HQN79_05785 PF11791 Aconitate B N-terminal domain HQN79_05785 PF06434 Aconitate hydratase 2 N-terminus HQN79_05785 PF00330 Aconitase family (aconitate hydratase) HQN79_05795 PF11127 Protein of unknown function (DUF2892) HQN79_05795 PF00581 Rhodanese-like domain HQN79_05800 PF05698 Bacterial trigger factor protein (TF) C-terminus HQN79_05800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_05800 PF05697 Bacterial trigger factor protein (TF) HQN79_05805 PF00574 Clp protease HQN79_05810 PF06689 ClpX C4-type zinc finger HQN79_05810 PF10431 C-terminal, D2-small domain, of ClpB protein HQN79_05810 PF07724 AAA domain (Cdc48 subfamily) HQN79_05815 PF02190 ATP-dependent protease La (LON) substrate-binding domain HQN79_05815 PF05362 Lon protease (S16) C-terminal proteolytic domain HQN79_05815 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_05820 PF00216 Bacterial DNA-binding protein HQN79_05860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQN79_05865 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_05870 PF12911 N-terminal TM domain of oligopeptide transport permease C HQN79_05870 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_05875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQN79_05875 PF00005 ABC transporter HQN79_05880 PF00106 short chain dehydrogenase HQN79_05885 PF13419 Haloacid dehalogenase-like hydrolase HQN79_05895 PF03989 DNA gyrase C-terminal domain, beta-propeller HQN79_05895 PF00521 DNA gyrase/topoisomerase IV, subunit A HQN79_05900 PF00266 Aminotransferase class-V HQN79_05905 PF01842 ACT domain HQN79_05905 PF01817 Chorismate mutase type II HQN79_05905 PF00800 Prephenate dehydratase HQN79_05910 PF00155 Aminotransferase class I and II HQN79_05915 PF02153 Prephenate dehydrogenase HQN79_05920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQN79_05925 PF02224 Cytidylate kinase HQN79_05930 PF00575 S1 RNA binding domain HQN79_05935 PF00216 Bacterial DNA-binding protein HQN79_05940 PF00141 Peroxidase HQN79_05950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQN79_05955 PF01250 Ribosomal protein S6 HQN79_05960 PF01084 Ribosomal protein S18 HQN79_05970 PF01281 Ribosomal protein L9, N-terminal domain HQN79_05970 PF03948 Ribosomal protein L9, C-terminal domain HQN79_05975 PF03796 DnaB-like helicase C terminal domain HQN79_05975 PF00772 DnaB-like helicase N terminal domain HQN79_05980 PF01168 Alanine racemase, N-terminal domain HQN79_05980 PF00842 Alanine racemase, C-terminal domain HQN79_05985 PF00293 NUDIX domain HQN79_05995 PF01554 MatE HQN79_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_06010 PF00672 HAMP domain HQN79_06010 PF00512 His Kinase A (phospho-acceptor) domain HQN79_06015 PF00072 Response regulator receiver domain HQN79_06015 PF00486 Transcriptional regulatory protein, C terminal HQN79_06025 PF04963 Sigma-54 factor, core binding domain HQN79_06025 PF04552 Sigma-54, DNA binding domain HQN79_06025 PF00309 Sigma-54 factor, Activator interacting domain (AID) HQN79_06065 PF01258 Prokaryotic dksA/traR C4-type zinc finger HQN79_06070 PF13419 Haloacid dehalogenase-like hydrolase HQN79_06090 PF01653 NAD-dependent DNA ligase adenylation domain HQN79_06090 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HQN79_06090 PF03120 NAD-dependent DNA ligase OB-fold domain HQN79_06090 PF00533 BRCA1 C Terminus (BRCT) domain HQN79_06090 PF12826 Helix-hairpin-helix motif HQN79_06095 PF04751 Protein of unknown function (DUF615) HQN79_06100 PF00892 EamA-like transporter family HQN79_06110 PF01726 LexA DNA binding domain HQN79_06110 PF00717 Peptidase S24-like HQN79_06115 PF03795 YCII-related domain HQN79_06120 PF04279 Intracellular septation protein A HQN79_06125 PF02811 PHP domain HQN79_06130 PF01300 Telomere recombination HQN79_06135 PF02163 Peptidase family M50 HQN79_06140 PF01479 S4 domain HQN79_06140 PF00849 RNA pseudouridylate synthase HQN79_06165 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQN79_06200 PF13291 ACT domain HQN79_06200 PF02824 TGS domain HQN79_06200 PF04607 Region found in RelA / SpoT proteins HQN79_06210 PF00990 Diguanylate cyclase, GGDEF domain HQN79_06210 PF00072 Response regulator receiver domain HQN79_06215 PF01207 Dihydrouridine synthase (Dus) HQN79_06220 PF13742 OB-fold nucleic acid binding domain HQN79_06220 PF02601 Exonuclease VII, large subunit HQN79_06230 PF03960 ArsC family HQN79_06240 PF00291 Pyridoxal-phosphate dependent enzyme HQN79_06250 PF00742 Homoserine dehydrogenase HQN79_06250 PF01842 ACT domain HQN79_06250 PF03447 Homoserine dehydrogenase, NAD binding domain HQN79_06255 PF00155 Aminotransferase class I and II HQN79_06260 PF04430 Protein of unknown function (DUF498/DUF598) HQN79_06265 PF01551 Peptidase family M23 HQN79_06265 PF01476 LysM domain HQN79_06270 PF09335 SNARE associated Golgi protein HQN79_06280 PF01975 Survival protein SurE HQN79_06285 PF01713 Smr domain HQN79_06295 PF00113 Enolase, C-terminal TIM barrel domain HQN79_06295 PF03952 Enolase, N-terminal domain HQN79_06300 PF00793 DAHP synthetase I family HQN79_06305 PF06418 CTP synthase N-terminus HQN79_06305 PF00117 Glutamine amidotransferase class-I HQN79_06310 PF11734 TilS substrate C-terminal domain HQN79_06310 PF01171 PP-loop family HQN79_06315 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQN79_06325 PF18381 YcaO cyclodehydratase C-terminal domain HQN79_06325 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding HQN79_06345 PF00814 Glycoprotease family HQN79_06350 PF13307 Helicase C-terminal domain HQN79_06350 PF06733 DEAD_2 HQN79_06355 PF00444 Ribosomal protein L36 HQN79_06430 PF00589 Phage integrase family HQN79_06430 PF13356 Arm DNA-binding domain HQN79_06435 PF01584 CheW-like domain HQN79_06435 PF00072 Response regulator receiver domain HQN79_06440 PF01351 Ribonuclease HII HQN79_06445 PF02684 Lipid-A-disaccharide synthetase HQN79_06450 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HQN79_06450 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_06455 PF07977 FabA-like domain HQN79_06460 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_06460 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HQN79_06465 PF03938 Outer membrane protein (OmpH-like) HQN79_06470 PF07244 Surface antigen variable number repeat HQN79_06470 PF01103 Surface antigen HQN79_06475 PF02163 Peptidase family M50 HQN79_06475 PF13180 PDZ domain HQN79_06475 PF17820 PDZ domain HQN79_06485 PF01255 Putative undecaprenyl diphosphate synthase HQN79_06490 PF01765 Ribosome recycling factor HQN79_06495 PF00696 Amino acid kinase family HQN79_06500 PF00889 Elongation factor TS HQN79_06505 PF00318 Ribosomal protein S2 HQN79_06510 PF00557 Metallopeptidase family M24 HQN79_06515 PF08335 GlnD PII-uridylyltransferase HQN79_06515 PF01966 HD domain HQN79_06515 PF01909 Nucleotidyltransferase domain HQN79_06525 PF14602 Hexapeptide repeat of succinyl-transferase HQN79_06525 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HQN79_06530 PF03960 ArsC family HQN79_06535 PF07687 Peptidase dimerisation domain HQN79_06535 PF01546 Peptidase family M20/M25/M40 HQN79_06545 PF00563 EAL domain HQN79_06545 PF01590 GAF domain HQN79_06545 PF00360 Phytochrome region HQN79_06545 PF00990 Diguanylate cyclase, GGDEF domain HQN79_06550 PF18665 Tetracyclin repressor-like, C-terminal domain HQN79_06550 PF00440 Bacterial regulatory proteins, tetR family HQN79_06575 PF01066 CDP-alcohol phosphatidyltransferase HQN79_06580 PF08459 UvrC Helix-hairpin-helix N-terminal HQN79_06580 PF02151 UvrB/uvrC motif HQN79_06580 PF01541 GIY-YIG catalytic domain HQN79_06580 PF12826 Helix-hairpin-helix motif HQN79_06585 PF01343 Peptidase family S49 HQN79_06590 PF00005 ABC transporter HQN79_06590 PF12848 ABC transporter HQN79_06595 PF00005 ABC transporter HQN79_06600 PF02687 FtsX-like permease family HQN79_06600 PF12704 MacB-like periplasmic core domain HQN79_06605 PF03458 UPF0126 domain HQN79_06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_06620 PF17757 UvrB interaction domain HQN79_06620 PF02559 CarD-like/TRCF domain HQN79_06620 PF00270 DEAD/DEAH box helicase HQN79_06620 PF00271 Helicase conserved C-terminal domain HQN79_06620 PF03461 TRCF domain HQN79_06635 PF00990 Diguanylate cyclase, GGDEF domain HQN79_06635 PF00072 Response regulator receiver domain HQN79_06650 PF01266 FAD dependent oxidoreductase HQN79_06655 PF01964 Radical SAM ThiC family HQN79_06655 PF13667 ThiC-associated domain HQN79_06670 PF00209 Sodium:neurotransmitter symporter family HQN79_06675 PF01565 FAD binding domain HQN79_06675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQN79_06680 PF01852 START domain HQN79_06685 PF00924 Mechanosensitive ion channel HQN79_06690 PF00933 Glycosyl hydrolase family 3 N terminal domain HQN79_06705 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_06720 PF01875 Memo-like protein HQN79_06730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQN79_06735 PF02321 Outer membrane efflux protein HQN79_06740 PF01928 CYTH domain HQN79_06745 PF00291 Pyridoxal-phosphate dependent enzyme HQN79_06755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_06755 PF00672 HAMP domain HQN79_06755 PF02203 Tar ligand binding domain homologue HQN79_06765 PF03459 TOBE domain HQN79_06770 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HQN79_06770 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HQN79_06785 PF12838 4Fe-4S dicluster domain HQN79_06805 PF04055 Radical SAM superfamily HQN79_06805 PF18693 TRAM domain HQN79_06805 PF00919 Uncharacterized protein family UPF0004 HQN79_06815 PF07715 TonB-dependent Receptor Plug Domain HQN79_06815 PF00593 TonB dependent receptor HQN79_06825 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_06835 PF03692 Putative zinc- or iron-chelating domain HQN79_06840 PF00849 RNA pseudouridylate synthase HQN79_06895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HQN79_06895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_06900 PF01613 Flavin reductase like domain HQN79_06905 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HQN79_06910 PF07995 Glucose / Sorbosone dehydrogenase HQN79_06915 PF13419 Haloacid dehalogenase-like hydrolase HQN79_06940 PF01810 LysE type translocator HQN79_06945 PF01053 Cys/Met metabolism PLP-dependent enzyme HQN79_06960 PF00270 DEAD/DEAH box helicase HQN79_06960 PF00271 Helicase conserved C-terminal domain HQN79_06970 PF00672 HAMP domain HQN79_06970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_06975 PF00990 Diguanylate cyclase, GGDEF domain HQN79_06975 PF00072 Response regulator receiver domain HQN79_06985 PF00881 Nitroreductase family HQN79_06995 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HQN79_06995 PF10518 TAT (twin-arginine translocation) pathway signal sequence HQN79_06995 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_07000 PF02627 Carboxymuconolactone decarboxylase family HQN79_07010 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HQN79_07055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQN79_07060 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) HQN79_07065 PF00271 Helicase conserved C-terminal domain HQN79_07065 PF00270 DEAD/DEAH box helicase HQN79_07085 PF12843 Putative quorum-sensing-regulated virulence factor HQN79_07090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQN79_07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_07095 PF02817 e3 binding domain HQN79_07095 PF00364 Biotin-requiring enzyme HQN79_07095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQN79_07100 PF17831 Pyruvate dehydrogenase E1 component middle domain HQN79_07100 PF00456 Transketolase, thiamine diphosphate binding domain HQN79_07105 PF00672 HAMP domain HQN79_07105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_07105 PF02203 Tar ligand binding domain homologue HQN79_07110 PF00293 NUDIX domain HQN79_07120 PF00258 Flavodoxin HQN79_07130 PF01510 N-acetylmuramoyl-L-alanine amidase HQN79_07135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HQN79_07135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HQN79_07140 PF00999 Sodium/hydrogen exchanger family HQN79_07140 PF02080 TrkA-C domain HQN79_07140 PF02254 TrkA-N domain HQN79_07150 PF00849 RNA pseudouridylate synthase HQN79_07150 PF01479 S4 domain HQN79_07155 PF13525 Outer membrane lipoprotein HQN79_07160 PF02540 NAD synthase HQN79_07160 PF00795 Carbon-nitrogen hydrolase HQN79_07165 PF00549 CoA-ligase HQN79_07165 PF02629 CoA binding domain HQN79_07170 PF08442 ATP-grasp domain HQN79_07170 PF00549 CoA-ligase HQN79_07180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_07205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HQN79_07205 PF00271 Helicase conserved C-terminal domain HQN79_07205 PF04408 Helicase associated domain (HA2) HQN79_07205 PF00270 DEAD/DEAH box helicase HQN79_07205 PF11898 Domain of unknown function (DUF3418) HQN79_07210 PF00753 Metallo-beta-lactamase superfamily HQN79_07215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_07220 PF00929 Exonuclease HQN79_07225 PF00075 RNase H HQN79_07230 PF08241 Methyltransferase domain HQN79_07235 PF00753 Metallo-beta-lactamase superfamily HQN79_07235 PF16123 Hydroxyacylglutathione hydrolase C-terminus HQN79_07240 PF01476 LysM domain HQN79_07240 PF01464 Transglycosylase SLT domain HQN79_07245 PF14718 Soluble lytic murein transglycosylase L domain HQN79_07245 PF01464 Transglycosylase SLT domain HQN79_07250 PF09190 DALR domain HQN79_07250 PF01406 tRNA synthetases class I (C) catalytic domain HQN79_07255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQN79_07260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQN79_07265 PF00149 Calcineurin-like phosphoesterase HQN79_07270 PF00375 Sodium:dicarboxylate symporter family HQN79_07280 PF04608 Phosphatidylglycerophosphatase A HQN79_07305 PF08281 Sigma-70, region 4 HQN79_07305 PF04542 Sigma-70 region 2 HQN79_07315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQN79_07315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQN79_07320 PF00764 Arginosuccinate synthase HQN79_07325 PF02666 Phosphatidylserine decarboxylase HQN79_07330 PF00543 Nitrogen regulatory protein P-II HQN79_07335 PF09335 SNARE associated Golgi protein HQN79_07340 PF05362 Lon protease (S16) C-terminal proteolytic domain HQN79_07340 PF13654 AAA domain HQN79_07350 PF00072 Response regulator receiver domain HQN79_07350 PF00158 Sigma-54 interaction domain HQN79_07350 PF02954 Bacterial regulatory protein, Fis family HQN79_07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_07355 PF00512 His Kinase A (phospho-acceptor) domain HQN79_07355 PF00989 PAS fold HQN79_07375 PF01966 HD domain HQN79_07390 PF06508 Queuosine biosynthesis protein QueC HQN79_07400 PF00691 OmpA family HQN79_07405 PF07676 WD40-like Beta Propeller Repeat HQN79_07405 PF04052 TolB amino-terminal domain HQN79_07415 PF02472 Biopolymer transport protein ExbD/TolR HQN79_07420 PF01618 MotA/TolQ/ExbB proton channel family HQN79_07425 PF05491 RuvB C-terminal winged helix domain HQN79_07425 PF17864 RuvB AAA lid domain HQN79_07425 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQN79_07430 PF07499 RuvA, C-terminal domain HQN79_07430 PF01330 RuvA N terminal domain HQN79_07435 PF02075 Crossover junction endodeoxyribonuclease RuvC HQN79_07440 PF02445 Quinolinate synthetase A protein HQN79_07445 PF01336 OB-fold nucleic acid binding domain HQN79_07445 PF00152 tRNA synthetases class II (D, K and N) HQN79_07445 PF02938 GAD domain HQN79_07460 PF00348 Polyprenyl synthetase HQN79_07465 PF01242 6-pyruvoyl tetrahydropterin synthase HQN79_07470 PF01478 Type IV leader peptidase family HQN79_07470 PF06750 Bacterial Peptidase A24 N-terminal domain HQN79_07480 PF00793 DAHP synthetase I family HQN79_07485 PF02769 AIR synthase related protein, C-terminal domain HQN79_07485 PF00586 AIR synthase related protein, N-terminal domain HQN79_07490 PF01029 NusB family HQN79_07495 PF00885 6,7-dimethyl-8-ribityllumazine synthase HQN79_07500 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQN79_07500 PF00925 GTP cyclohydrolase II HQN79_07505 PF00677 Lumazine binding domain HQN79_07510 PF01872 RibD C-terminal domain HQN79_07510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQN79_07515 PF03477 ATP cone domain HQN79_07520 PF00464 Serine hydroxymethyltransferase HQN79_07525 PF00005 ABC transporter HQN79_07525 PF12848 ABC transporter HQN79_07540 PF00672 HAMP domain HQN79_07540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_07540 PF02203 Tar ligand binding domain homologue HQN79_07560 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HQN79_07560 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HQN79_07560 PF02769 AIR synthase related protein, C-terminal domain HQN79_07570 PF00701 Dihydrodipicolinate synthetase family HQN79_07575 PF00578 AhpC/TSA family HQN79_07580 PF02562 PhoH-like protein HQN79_07580 PF13638 PIN domain HQN79_07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_07585 PF03466 LysR substrate binding domain HQN79_07590 PF02254 TrkA-N domain HQN79_07590 PF07885 Ion channel HQN79_07595 PF01494 FAD binding domain HQN79_07600 PF01494 FAD binding domain HQN79_07605 PF00557 Metallopeptidase family M24 HQN79_07605 PF05195 Aminopeptidase P, N-terminal domain HQN79_07615 PF05164 Cell division protein ZapA HQN79_07620 PF01812 5-formyltetrahydrofolate cyclo-ligase family HQN79_07625 PF11741 AMIN domain HQN79_07625 PF01520 N-acetylmuramoyl-L-alanine amidase HQN79_07630 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HQN79_07635 PF08331 Domain of unknown function (DUF1730) HQN79_07640 PF01966 HD domain HQN79_07640 PF13286 Phosphohydrolase-associated domain HQN79_07655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQN79_07655 PF04073 Aminoacyl-tRNA editing domain HQN79_07655 PF03129 Anticodon binding domain HQN79_07665 PF01926 50S ribosome-binding GTPase HQN79_07690 PF13533 Biotin-lipoyl like HQN79_07705 PF00578 AhpC/TSA family HQN79_07710 PF00308 Bacterial dnaA protein HQN79_07720 PF02769 AIR synthase related protein, C-terminal domain HQN79_07720 PF00586 AIR synthase related protein, N-terminal domain HQN79_07725 PF00551 Formyl transferase HQN79_07735 PF00692 dUTPase HQN79_07740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HQN79_07740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HQN79_07745 PF00291 Pyridoxal-phosphate dependent enzyme HQN79_07745 PF00585 C-terminal regulatory domain of Threonine dehydratase HQN79_07750 PF02630 SCO1/SenC HQN79_07765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HQN79_07770 PF00578 AhpC/TSA family HQN79_07775 PF02581 Thiamine monophosphate synthase HQN79_07780 PF00202 Aminotransferase class-III HQN79_07790 PF00270 DEAD/DEAH box helicase HQN79_07790 PF04408 Helicase associated domain (HA2) HQN79_07790 PF00271 Helicase conserved C-terminal domain HQN79_07790 PF08482 ATP-dependent helicase C-terminal HQN79_07800 PF04315 Elongation factor P hydroxylase HQN79_07820 PF01225 Mur ligase family, catalytic domain HQN79_07820 PF02875 Mur ligase family, glutamate ligase domain HQN79_07820 PF08245 Mur ligase middle domain HQN79_07825 PF00570 HRDC domain HQN79_07825 PF01612 3'-5' exonuclease HQN79_07830 PF00365 Phosphofructokinase HQN79_07845 PF09997 Predicted membrane protein (DUF2238) HQN79_07850 PF13520 Amino acid permease HQN79_07855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) HQN79_07860 PF06751 Ethanolamine ammonia lyase large subunit (EutB) HQN79_07865 PF12833 Helix-turn-helix domain HQN79_07870 PF04107 Glutamate-cysteine ligase family 2(GCS2) HQN79_07870 PF01546 Peptidase family M20/M25/M40 HQN79_07880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQN79_07900 PF02321 Outer membrane efflux protein HQN79_07905 PF00664 ABC transporter transmembrane region HQN79_07905 PF00005 ABC transporter HQN79_07905 PF03412 Peptidase C39 family HQN79_07910 PF00529 HlyD membrane-fusion protein of T1SS HQN79_07910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_07915 PF00196 Bacterial regulatory proteins, luxR family HQN79_07915 PF00072 Response regulator receiver domain HQN79_07920 PF00563 EAL domain HQN79_07920 PF03707 Bacterial signalling protein N terminal repeat HQN79_07920 PF00990 Diguanylate cyclase, GGDEF domain HQN79_07925 PF00005 ABC transporter HQN79_07925 PF00664 ABC transporter transmembrane region HQN79_07930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQN79_07930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQN79_07945 PF00690 Cation transporter/ATPase, N-terminus HQN79_07945 PF00689 Cation transporting ATPase, C-terminus HQN79_07950 PF00534 Glycosyl transferases group 1 HQN79_07950 PF00862 Sucrose synthase HQN79_07955 PF05166 YcgL domain HQN79_07955 PF05116 Sucrose-6F-phosphate phosphohydrolase HQN79_07960 PF00294 pfkB family carbohydrate kinase HQN79_07965 PF00128 Alpha amylase, catalytic domain HQN79_07970 PF02834 LigT like Phosphoesterase HQN79_08010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQN79_08015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQN79_08015 PF02403 Seryl-tRNA synthetase N-terminal domain HQN79_08020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HQN79_08025 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_08025 PF12002 MgsA AAA+ ATPase C terminal HQN79_08025 PF16193 AAA C-terminal domain HQN79_08030 PF03548 Outer membrane lipoprotein carrier protein LolA HQN79_08035 PF01580 FtsK/SpoIIIE family HQN79_08035 PF09397 Ftsk gamma domain HQN79_08035 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HQN79_08035 PF17854 FtsK alpha domain HQN79_08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_08050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQN79_08050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HQN79_08065 PF00672 HAMP domain HQN79_08065 PF02743 Cache domain HQN79_08065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_08070 PF00072 Response regulator receiver domain HQN79_08070 PF01339 CheB methylesterase HQN79_08075 PF01739 CheR methyltransferase, SAM binding domain HQN79_08075 PF03705 CheR methyltransferase, all-alpha domain HQN79_08085 PF01584 CheW-like domain HQN79_08090 PF00072 Response regulator receiver domain HQN79_08100 PF01312 FlhB HrpN YscU SpaS Family HQN79_08105 PF01584 CheW-like domain HQN79_08110 PF02895 Signal transducing histidine kinase, homodimeric domain HQN79_08110 PF01584 CheW-like domain HQN79_08110 PF00072 Response regulator receiver domain HQN79_08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_08110 PF01627 Hpt domain HQN79_08115 PF04344 Chemotaxis phosphatase, CheZ HQN79_08120 PF00072 Response regulator receiver domain HQN79_08125 PF04545 Sigma-70, region 4 HQN79_08125 PF04542 Sigma-70 region 2 HQN79_08125 PF04539 Sigma-70 region 3 HQN79_08130 PF10609 NUBPL iron-transfer P-loop NTPase HQN79_08135 PF00448 SRP54-type protein, GTPase domain HQN79_08140 PF00771 FHIPEP family HQN79_08145 PF01312 FlhB HrpN YscU SpaS Family HQN79_08150 PF01311 Bacterial export proteins, family 1 HQN79_08155 PF01313 Bacterial export proteins, family 3 HQN79_08160 PF00813 FliP family HQN79_08165 PF04347 Flagellar biosynthesis protein, FliO HQN79_08170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQN79_08175 PF02154 Flagellar motor switch protein FliM HQN79_08175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HQN79_08185 PF00691 OmpA family HQN79_08185 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQN79_08190 PF01618 MotA/TolQ/ExbB proton channel family HQN79_08195 PF00672 HAMP domain HQN79_08195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_08210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_08210 PF18269 T3SS EscN ATPase C-terminal domain HQN79_08220 PF14842 FliG N-terminal domain HQN79_08220 PF01706 FliG C-terminal domain HQN79_08220 PF14841 FliG middle domain HQN79_08225 PF08345 Flagellar M-ring protein C-terminal HQN79_08225 PF01514 Secretory protein of YscJ/FliF family HQN79_08230 PF02049 Flagellar hook-basal body complex protein FliE HQN79_08235 PF02954 Bacterial regulatory protein, Fis family HQN79_08235 PF00158 Sigma-54 interaction domain HQN79_08235 PF00072 Response regulator receiver domain HQN79_08240 PF00989 PAS fold HQN79_08240 PF00512 His Kinase A (phospho-acceptor) domain HQN79_08240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_08245 PF02954 Bacterial regulatory protein, Fis family HQN79_08245 PF06490 Flagellar regulatory protein FleQ HQN79_08245 PF00158 Sigma-54 interaction domain HQN79_08255 PF02561 Flagellar protein FliS HQN79_08275 PF00669 Bacterial flagellin N-terminal helical region HQN79_08275 PF00700 Bacterial flagellin C-terminal helical region HQN79_08280 PF00669 Bacterial flagellin N-terminal helical region HQN79_08280 PF00700 Bacterial flagellin C-terminal helical region HQN79_08290 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_08290 PF00483 Nucleotidyl transferase HQN79_08300 PF08666 SAF domain HQN79_08300 PF03102 NeuB family HQN79_08310 PF02348 Cytidylyltransferase HQN79_08315 PF02585 GlcNAc-PI de-N-acetylase HQN79_08320 PF01370 NAD dependent epimerase/dehydratase family HQN79_08320 PF02911 Formyl transferase, C-terminal domain HQN79_08320 PF00551 Formyl transferase HQN79_08325 PF02350 UDP-N-acetylglucosamine 2-epimerase HQN79_08330 PF08666 SAF domain HQN79_08330 PF03102 NeuB family HQN79_08340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HQN79_08345 PF01370 NAD dependent epimerase/dehydratase family HQN79_08350 PF01464 Transglycosylase SLT domain HQN79_08350 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HQN79_08355 PF00669 Bacterial flagellin N-terminal helical region HQN79_08365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQN79_08365 PF10135 Rod binding protein HQN79_08370 PF02119 Flagellar P-ring protein HQN79_08380 PF02107 Flagellar L-ring protein HQN79_08385 PF00460 Flagella basal body rod protein HQN79_08385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQN79_08390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQN79_08390 PF00460 Flagella basal body rod protein HQN79_08395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQN79_08395 PF00460 Flagella basal body rod protein HQN79_08395 PF07559 Flagellar basal body protein FlaE HQN79_08400 PF03963 Flagellar hook capping protein - N-terminal region HQN79_08405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HQN79_08405 PF00460 Flagella basal body rod protein HQN79_08410 PF00460 Flagella basal body rod protein HQN79_08420 PF00072 Response regulator receiver domain HQN79_08420 PF01584 CheW-like domain HQN79_08470 PF01433 Peptidase family M1 domain HQN79_08470 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HQN79_08470 PF11940 Domain of unknown function (DUF3458) Ig-like fold HQN79_08475 PF00691 OmpA family HQN79_08480 PF00027 Cyclic nucleotide-binding domain HQN79_08480 PF13545 Crp-like helix-turn-helix domain HQN79_08485 PF00294 pfkB family carbohydrate kinase HQN79_08490 PF00588 SpoU rRNA Methylase family HQN79_08490 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQN79_08495 PF00773 RNB domain HQN79_08495 PF00575 S1 RNA binding domain HQN79_08495 PF08461 Ribonuclease R winged-helix domain HQN79_08495 PF08206 Ribonuclease B OB domain HQN79_08495 PF17876 Cold shock domain HQN79_08500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_08500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQN79_08505 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQN79_08510 PF02926 THUMP domain HQN79_08510 PF02568 Thiamine biosynthesis protein (ThiI) HQN79_08515 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HQN79_08520 PF00719 Inorganic pyrophosphatase HQN79_08525 PF00311 Phosphoenolpyruvate carboxylase HQN79_08530 PF02261 Aspartate decarboxylase HQN79_08535 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQN79_08535 PF00691 OmpA family HQN79_08540 PF01618 MotA/TolQ/ExbB proton channel family HQN79_08545 PF02569 Pantoate-beta-alanine ligase HQN79_08550 PF02548 Ketopantoate hydroxymethyltransferase HQN79_08555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQN79_08560 PF01743 Poly A polymerase head domain HQN79_08560 PF12626 Polymerase A arginine-rich C-terminus HQN79_08560 PF12627 Probable RNA and SrmB- binding site of polymerase A HQN79_08570 PF00579 tRNA synthetases class I (W and Y) HQN79_08575 PF02203 Tar ligand binding domain homologue HQN79_08575 PF00672 HAMP domain HQN79_08575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_08600 PF00672 HAMP domain HQN79_08600 PF01627 Hpt domain HQN79_08600 PF00512 His Kinase A (phospho-acceptor) domain HQN79_08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_08600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQN79_08600 PF00072 Response regulator receiver domain HQN79_08605 PF08448 PAS fold HQN79_08605 PF00990 Diguanylate cyclase, GGDEF domain HQN79_08605 PF00563 EAL domain HQN79_08615 PF02384 N-6 DNA Methylase HQN79_08620 PF01420 Type I restriction modification DNA specificity domain HQN79_08635 PF18766 SWI2/SNF2 ATPase HQN79_08635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HQN79_08635 PF11867 Domain of unknown function (DUF3387) HQN79_08650 PF09588 YqaJ-like viral recombinase domain HQN79_08660 PF06067 Domain of unknown function (DUF932) HQN79_08690 PF00589 Phage integrase family HQN79_08690 PF13356 Arm DNA-binding domain HQN79_08700 PF02599 Global regulator protein family HQN79_08705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQN79_08705 PF01411 tRNA synthetases class II (A) HQN79_08705 PF02272 DHHA1 domain HQN79_08715 PF00154 recA bacterial DNA recombination protein HQN79_08720 PF02464 Competence-damaged protein HQN79_08725 PF05190 MutS family domain IV HQN79_08725 PF05192 MutS domain III HQN79_08725 PF05188 MutS domain II HQN79_08725 PF00488 MutS domain V HQN79_08725 PF01624 MutS domain I HQN79_08730 PF00085 Thioredoxin HQN79_08745 PF00795 Carbon-nitrogen hydrolase HQN79_08750 PF12848 ABC transporter HQN79_08750 PF00005 ABC transporter HQN79_08765 PF00183 Hsp90 protein HQN79_08780 PF01627 Hpt domain HQN79_08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_08780 PF01584 CheW-like domain HQN79_08780 PF02895 Signal transducing histidine kinase, homodimeric domain HQN79_08785 PF03975 CheD chemotactic sensory transduction HQN79_08790 PF14437 MafB19-like deaminase HQN79_08795 PF00117 Glutamine amidotransferase class-I HQN79_08795 PF00958 GMP synthase C terminal domain HQN79_08795 PF02540 NAD synthase HQN79_08800 PF00571 CBS domain HQN79_08800 PF00478 IMP dehydrogenase / GMP reductase domain HQN79_08825 PF00753 Metallo-beta-lactamase superfamily HQN79_08830 PF01618 MotA/TolQ/ExbB proton channel family HQN79_08835 PF02472 Biopolymer transport protein ExbD/TolR HQN79_08840 PF03544 Gram-negative bacterial TonB protein C-terminal HQN79_08845 PF02657 Fe-S metabolism associated domain HQN79_08860 PF01435 Peptidase family M48 HQN79_08865 PF02934 GatB/GatE catalytic domain HQN79_08865 PF02637 GatB domain HQN79_08870 PF01425 Amidase HQN79_08875 PF02686 Glu-tRNAGln amidotransferase C subunit HQN79_08885 PF04085 rod shape-determining protein MreC HQN79_08895 PF03717 Penicillin-binding Protein dimerisation domain HQN79_08895 PF00905 Penicillin binding protein transpeptidase domain HQN79_08900 PF01098 Cell cycle protein HQN79_08905 PF00768 D-alanyl-D-alanine carboxypeptidase HQN79_08905 PF07943 Penicillin-binding protein 5, C-terminal domain HQN79_08910 PF04359 Protein of unknown function (DUF493) HQN79_08915 PF03099 Biotin/lipoate A/B protein ligase family HQN79_08920 PF04055 Radical SAM superfamily HQN79_08920 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HQN79_08925 PF01430 Hsp33 protein HQN79_08930 PF03883 Peroxide stress protein YaaA HQN79_08935 PF03776 Septum formation topological specificity factor MinE HQN79_08940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HQN79_08945 PF03775 Septum formation inhibitor MinC, C-terminal domain HQN79_08945 PF05209 Septum formation inhibitor MinC, N-terminal domain HQN79_08955 PF00849 RNA pseudouridylate synthase HQN79_08955 PF01479 S4 domain HQN79_08960 PF00483 Nucleotidyl transferase HQN79_08965 PF01636 Phosphotransferase enzyme family HQN79_08970 PF04453 LPS transport system D HQN79_08975 PF00639 PPIC-type PPIASE domain HQN79_08975 PF09312 SurA N-terminal domain HQN79_08980 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HQN79_08985 PF00398 Ribosomal RNA adenine dimethylase HQN79_08990 PF00149 Calcineurin-like phosphoesterase HQN79_09000 PF01722 BolA-like protein HQN79_09015 PF00111 2Fe-2S iron-sulfur cluster binding domain HQN79_09020 PF12849 PBP superfamily domain HQN79_09025 PF01384 Phosphate transporter family HQN79_09030 PF11808 Phosphate regulon sensor protein PhoR HQN79_09030 PF00989 PAS fold HQN79_09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_09030 PF00512 His Kinase A (phospho-acceptor) domain HQN79_09035 PF00486 Transcriptional regulatory protein, C terminal HQN79_09035 PF00072 Response regulator receiver domain HQN79_09040 PF01895 PhoU domain HQN79_09045 PF00005 ABC transporter HQN79_09050 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_09060 PF00120 Glutamine synthetase, catalytic domain HQN79_09060 PF03951 Glutamine synthetase, beta-Grasp domain HQN79_09065 PF03710 Glutamate-ammonia ligase adenylyltransferase HQN79_09065 PF08335 GlnD PII-uridylyltransferase HQN79_09075 PF00543 Nitrogen regulatory protein P-II HQN79_09080 PF00909 Ammonium Transporter Family HQN79_09095 PF00669 Bacterial flagellin N-terminal helical region HQN79_09095 PF00700 Bacterial flagellin C-terminal helical region HQN79_09100 PF10458 Valyl tRNA synthetase tRNA binding arm HQN79_09100 PF00133 tRNA synthetases class I (I, L, M and V) HQN79_09100 PF08264 Anticodon-binding domain of tRNA HQN79_09105 PF08239 Bacterial SH3 domain HQN79_09115 PF13098 Thioredoxin-like domain HQN79_09115 PF10411 Disulfide bond isomerase protein N-terminus HQN79_09125 PF00512 His Kinase A (phospho-acceptor) domain HQN79_09125 PF09308 LuxQ, periplasmic HQN79_09125 PF00072 Response regulator receiver domain HQN79_09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_09130 PF02899 Phage integrase, N-terminal SAM-like domain HQN79_09130 PF00589 Phage integrase family HQN79_09135 PF01245 Ribosomal protein L19 HQN79_09140 PF01746 tRNA (Guanine-1)-methyltransferase HQN79_09145 PF05239 PRC-barrel domain HQN79_09145 PF01782 RimM N-terminal domain HQN79_09150 PF00886 Ribosomal protein S16 HQN79_09155 PF00448 SRP54-type protein, GTPase domain HQN79_09155 PF02881 SRP54-type protein, helical bundle domain HQN79_09155 PF02978 Signal peptide binding domain HQN79_09165 PF00571 CBS domain HQN79_09165 PF01595 Cyclin M transmembrane N-terminal domain HQN79_09165 PF03471 Transporter associated domain HQN79_09170 PF00459 Inositol monophosphatase family HQN79_09175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HQN79_09180 PF18073 Rubredoxin metal binding domain HQN79_09185 PF01645 Conserved region in glutamate synthase HQN79_09190 PF02167 Cytochrome C1 family HQN79_09195 PF00033 Cytochrome b/b6/petB HQN79_09195 PF00032 Cytochrome b(C-terminal)/b6/petD HQN79_09200 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HQN79_09200 PF00355 Rieske [2Fe-2S] domain HQN79_09205 PF01784 NIF3 (NGG1p interacting factor 3) HQN79_09210 PF00815 Histidinol dehydrogenase HQN79_09215 PF01634 ATP phosphoribosyltransferase HQN79_09220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQN79_09230 PF01061 ABC-2 type transporter HQN79_09235 PF00005 ABC transporter HQN79_09250 PF02470 MlaD protein HQN79_09255 PF02405 Permease MlaE HQN79_09260 PF00005 ABC transporter HQN79_09270 PF01699 Sodium/calcium exchanger protein HQN79_09290 PF00005 ABC transporter HQN79_09290 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQN79_09295 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQN79_09300 PF03448 MgtE intracellular N domain HQN79_09300 PF01769 Divalent cation transporter HQN79_09300 PF00571 CBS domain HQN79_09310 PF00106 short chain dehydrogenase HQN79_09315 PF01565 FAD binding domain HQN79_09315 PF04030 D-arabinono-1,4-lactone oxidase HQN79_09325 PF01040 UbiA prenyltransferase family HQN79_09330 PF05736 OprF membrane domain HQN79_09330 PF00691 OmpA family HQN79_09345 PF02706 Chain length determinant protein HQN79_09345 PF13807 G-rich domain on putative tyrosine kinase HQN79_09345 PF13614 AAA domain HQN79_09350 PF02563 Polysaccharide biosynthesis/export protein HQN79_09350 PF10531 SLBB domain HQN79_09360 PF02719 Polysaccharide biosynthesis protein HQN79_09365 PF02397 Bacterial sugar transferase HQN79_09370 PF01370 NAD dependent epimerase/dehydratase family HQN79_09380 PF02350 UDP-N-acetylglucosamine 2-epimerase HQN79_09385 PF01370 NAD dependent epimerase/dehydratase family HQN79_09390 PF08485 Polysaccharide biosynthesis protein C-terminal HQN79_09390 PF02719 Polysaccharide biosynthesis protein HQN79_09405 PF02348 Cytidylyltransferase HQN79_09410 PF00682 HMGL-like HQN79_09450 PF01370 NAD dependent epimerase/dehydratase family HQN79_09455 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQN79_09455 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQN79_09455 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQN79_09470 PF02547 Queuosine biosynthesis protein HQN79_09475 PF01702 Queuine tRNA-ribosyltransferase HQN79_09485 PF02699 Preprotein translocase subunit HQN79_09490 PF13721 SecD export protein N-terminal TM region HQN79_09490 PF02355 Protein export membrane protein HQN79_09490 PF07549 SecD/SecF GG Motif HQN79_09495 PF02355 Protein export membrane protein HQN79_09495 PF07549 SecD/SecF GG Motif HQN79_09510 PF03144 Elongation factor Tu domain 2 HQN79_09510 PF00009 Elongation factor Tu GTP binding domain HQN79_09510 PF16658 Class II release factor RF3, C-terminal domain HQN79_09525 PF00990 Diguanylate cyclase, GGDEF domain HQN79_09525 PF08448 PAS fold HQN79_09535 PF03372 Endonuclease/Exonuclease/phosphatase family HQN79_09540 PF13396 Phospholipase_D-nuclease N-terminal HQN79_09540 PF13091 PLD-like domain HQN79_09550 PF00593 TonB dependent receptor HQN79_09550 PF07715 TonB-dependent Receptor Plug Domain HQN79_09550 PF00593 TonB dependent receptor HQN79_09550 PF07715 TonB-dependent Receptor Plug Domain HQN79_09560 PF00296 Luciferase-like monooxygenase HQN79_09570 PF00005 ABC transporter HQN79_09575 PF00563 EAL domain HQN79_09575 PF03707 Bacterial signalling protein N terminal repeat HQN79_09575 PF00990 Diguanylate cyclase, GGDEF domain HQN79_09595 PF00817 impB/mucB/samB family HQN79_09595 PF13438 Domain of unknown function (DUF4113) HQN79_09595 PF11799 impB/mucB/samB family C-terminal domain HQN79_09595 PF11798 IMS family HHH motif HQN79_09600 PF00717 Peptidase S24-like HQN79_09605 PF00072 Response regulator receiver domain HQN79_09610 PF00483 Nucleotidyl transferase HQN79_09615 PF00342 Phosphoglucose isomerase HQN79_09620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HQN79_09620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HQN79_09620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HQN79_09625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQN79_09625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQN79_09625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQN79_09625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQN79_09630 PF03739 Lipopolysaccharide export system permease LptF/LptG HQN79_09640 PF00883 Cytosol aminopeptidase family, catalytic domain HQN79_09640 PF02789 Cytosol aminopeptidase family, N-terminal domain HQN79_09650 PF00437 Type II/IV secretion system protein HQN79_09655 PF00437 Type II/IV secretion system protein HQN79_09675 PF00271 Helicase conserved C-terminal domain HQN79_09675 PF02151 UvrB/uvrC motif HQN79_09675 PF17757 UvrB interaction domain HQN79_09675 PF12344 Ultra-violet resistance protein B HQN79_09675 PF04851 Type III restriction enzyme, res subunit HQN79_09680 PF00155 Aminotransferase class I and II HQN79_09685 PF14743 DNA ligase OB-like domain HQN79_09685 PF01068 ATP dependent DNA ligase domain HQN79_09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_09705 PF03459 TOBE domain HQN79_09715 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQN79_09715 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQN79_09720 PF00317 Ribonucleotide reductase, all-alpha domain HQN79_09720 PF02867 Ribonucleotide reductase, barrel domain HQN79_09720 PF03477 ATP cone domain HQN79_09725 PF13458 Periplasmic binding protein HQN79_09735 PF02653 Branched-chain amino acid transport system / permease component HQN79_09740 PF00005 ABC transporter HQN79_09740 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQN79_09745 PF00005 ABC transporter HQN79_09750 PF03069 Acetamidase/Formamidase family HQN79_09770 PF00795 Carbon-nitrogen hydrolase HQN79_09780 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQN79_09785 PF01730 UreF HQN79_09790 PF05194 UreE urease accessory protein, C-terminal domain HQN79_09790 PF02814 UreE urease accessory protein, N-terminal domain HQN79_09795 PF00449 Urease alpha-subunit, N-terminal domain HQN79_09795 PF01979 Amidohydrolase family HQN79_09800 PF00699 Urease beta subunit HQN79_09805 PF00547 Urease, gamma subunit HQN79_09810 PF01774 UreD urease accessory protein HQN79_09820 PF00459 Inositol monophosphatase family HQN79_09825 PF00293 NUDIX domain HQN79_09830 PF13419 Haloacid dehalogenase-like hydrolase HQN79_09835 PF05724 Thiopurine S-methyltransferase (TPMT) HQN79_09850 PF01292 Prokaryotic cytochrome b561 HQN79_09860 PF00486 Transcriptional regulatory protein, C terminal HQN79_09860 PF00072 Response regulator receiver domain HQN79_09865 PF00512 His Kinase A (phospho-acceptor) domain HQN79_09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_09865 PF00672 HAMP domain HQN79_09870 PF00356 Bacterial regulatory proteins, lacI family HQN79_09875 PF03707 Bacterial signalling protein N terminal repeat HQN79_09875 PF00990 Diguanylate cyclase, GGDEF domain HQN79_09875 PF00563 EAL domain HQN79_09890 PF00583 Acetyltransferase (GNAT) family HQN79_09895 PF00202 Aminotransferase class-III HQN79_09900 PF06339 Ectoine synthase HQN79_09905 PF13840 ACT domain HQN79_09905 PF00696 Amino acid kinase family HQN79_09910 PF00268 Ribonucleotide reductase, small chain HQN79_09935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HQN79_09935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HQN79_09945 PF00005 ABC transporter HQN79_09950 PF01032 FecCD transport family HQN79_09955 PF03631 Virulence factor BrkB HQN79_09960 PF05378 Hydantoinase/oxoprolinase N-terminal region HQN79_09960 PF01968 Hydantoinase/oxoprolinase HQN79_09970 PF01965 DJ-1/PfpI family HQN79_09975 PF13180 PDZ domain HQN79_09975 PF03572 Peptidase family S41 HQN79_09980 PF01022 Bacterial regulatory protein, arsR family HQN79_09995 PF01380 SIS domain HQN79_10000 PF00343 Carbohydrate phosphorylase HQN79_10005 PF08323 Starch synthase catalytic domain HQN79_10005 PF00534 Glycosyl transferases group 1 HQN79_10010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQN79_10010 PF02806 Alpha amylase, C-terminal all-beta domain HQN79_10010 PF00128 Alpha amylase, catalytic domain HQN79_10015 PF02446 4-alpha-glucanotransferase HQN79_10025 PF00483 Nucleotidyl transferase HQN79_10030 PF01380 SIS domain HQN79_10030 PF00571 CBS domain HQN79_10035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HQN79_10050 PF00227 Proteasome subunit HQN79_10055 PF02899 Phage integrase, N-terminal SAM-like domain HQN79_10055 PF00589 Phage integrase family HQN79_10065 PF01678 Diaminopimelate epimerase HQN79_10070 PF00004 ATPase family associated with various cellular activities (AAA) HQN79_10070 PF07724 AAA domain (Cdc48 subfamily) HQN79_10080 PF01209 ubiE/COQ5 methyltransferase family HQN79_10090 PF03109 ABC1 family HQN79_10110 PF00082 Subtilase family HQN79_10110 PF17936 Bacterial Ig domain HQN79_10125 PF05134 Type II secretion system (T2SS), protein L HQN79_10125 PF12693 GspL periplasmic domain HQN79_10130 PF03934 Type II secretion system (T2SS), protein K HQN79_10135 PF07963 Prokaryotic N-terminal methylation motif HQN79_10135 PF11612 Type II secretion system (T2SS), protein J HQN79_10140 PF07963 Prokaryotic N-terminal methylation motif HQN79_10140 PF02501 Type II secretion system (T2SS), protein I HQN79_10145 PF07963 Prokaryotic N-terminal methylation motif HQN79_10145 PF00114 Pilin (bacterial filament) HQN79_10150 PF08334 Type II secretion system (T2SS), protein G HQN79_10150 PF07963 Prokaryotic N-terminal methylation motif HQN79_10155 PF00482 Type II secretion system (T2SS), protein F HQN79_10160 PF00437 Type II/IV secretion system protein HQN79_10165 PF00263 Bacterial type II and III secretion system protein HQN79_10165 PF03958 Bacterial type II/III secretion system short domain HQN79_10170 PF11356 Type II secretion system protein C HQN79_10235 PF00589 Phage integrase family HQN79_10235 PF13356 Arm DNA-binding domain HQN79_10255 PF06071 Protein of unknown function (DUF933) HQN79_10255 PF01926 50S ribosome-binding GTPase HQN79_10260 PF01195 Peptidyl-tRNA hydrolase HQN79_10265 PF14693 Ribosomal protein TL5, C-terminal domain HQN79_10265 PF01386 Ribosomal L25p family HQN79_10270 PF14572 Phosphoribosyl synthetase-associated domain HQN79_10270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQN79_10285 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HQN79_10285 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HQN79_10285 PF01488 Shikimate / quinate 5-dehydrogenase HQN79_10290 PF00472 RF-1 domain HQN79_10290 PF03462 PCRF domain HQN79_10295 PF17827 PrmC N-terminal domain HQN79_10295 PF13847 Methyltransferase domain HQN79_10300 PF00899 ThiF family HQN79_10305 PF00691 OmpA family HQN79_10305 PF13677 Membrane MotB of proton-channel complex MotA/MotB HQN79_10310 PF01618 MotA/TolQ/ExbB proton channel family HQN79_10315 PF03989 DNA gyrase C-terminal domain, beta-propeller HQN79_10315 PF00521 DNA gyrase/topoisomerase IV, subunit A HQN79_10325 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HQN79_10340 PF08447 PAS fold HQN79_10340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_10340 PF08447 PAS fold HQN79_10340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_10365 PF00204 DNA gyrase B HQN79_10365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_10365 PF01751 Toprim domain HQN79_10365 PF00986 DNA gyrase B subunit, carboxyl terminus HQN79_10370 PF03167 Uracil DNA glycosylase superfamily HQN79_10385 PF01618 MotA/TolQ/ExbB proton channel family HQN79_10400 PF02092 Glycyl-tRNA synthetase beta subunit HQN79_10400 PF05746 DALR anticodon binding domain HQN79_10405 PF02091 Glycyl-tRNA synthetase alpha subunit HQN79_10415 PF01551 Peptidase family M23 HQN79_10415 PF04225 Opacity-associated protein A LysM-like domain HQN79_10420 PF03702 Anhydro-N-acetylmuramic acid kinase HQN79_10435 PF01370 NAD dependent epimerase/dehydratase family HQN79_10435 PF08338 Domain of unknown function (DUF1731) HQN79_10445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQN79_10445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQN79_10460 PF03773 Predicted permease HQN79_10470 PF01022 Bacterial regulatory protein, arsR family HQN79_10475 PF06039 Malate:quinone oxidoreductase (Mqo) HQN79_10480 PF07683 Cobalamin synthesis protein cobW C-terminal domain HQN79_10480 PF02492 CobW/HypB/UreG, nucleotide-binding domain HQN79_10485 PF02649 Type I GTP cyclohydrolase folE2 HQN79_10515 PF01541 GIY-YIG catalytic domain HQN79_10525 PF01594 AI-2E family transporter HQN79_10530 PF11892 Domain of unknown function (DUF3412) HQN79_10530 PF03641 Possible lysine decarboxylase HQN79_10530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HQN79_10535 PF00270 DEAD/DEAH box helicase HQN79_10535 PF00271 Helicase conserved C-terminal domain HQN79_10555 PF01544 CorA-like Mg2+ transporter protein HQN79_10560 PF02566 OsmC-like protein HQN79_10565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HQN79_10565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HQN79_10570 PF17284 Spermidine synthase tetramerisation domain HQN79_10575 PF02675 S-adenosylmethionine decarboxylase HQN79_10590 PF00218 Indole-3-glycerol phosphate synthase HQN79_10600 PF13614 AAA domain HQN79_10620 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HQN79_10625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HQN79_10625 PF00361 Proton-conducting membrane transporter HQN79_10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_10630 PF03466 LysR substrate binding domain HQN79_10640 PF01725 Ham1 family HQN79_10700 PF00101 Ribulose bisphosphate carboxylase, small chain HQN79_10705 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HQN79_10705 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HQN79_10710 PF04304 Protein of unknown function (DUF454) HQN79_10720 PF00591 Glycosyl transferase family, a/b domain HQN79_10720 PF02885 Glycosyl transferase family, helical bundle domain HQN79_10725 PF00117 Glutamine amidotransferase class-I HQN79_10730 PF00425 chorismate binding enzyme HQN79_10730 PF04715 Anthranilate synthase component I, N terminal region HQN79_10735 PF13419 Haloacid dehalogenase-like hydrolase HQN79_10740 PF00834 Ribulose-phosphate 3 epimerase family HQN79_10750 PF01259 SAICAR synthetase HQN79_10760 PF00484 Carbonic anhydrase HQN79_10775 PF00092 von Willebrand factor type A domain HQN79_10780 PF07728 AAA domain (dynein-related subfamily) HQN79_10780 PF08406 CbbQ/NirQ/NorQ C-terminal HQN79_10785 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HQN79_10785 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HQN79_10790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_10790 PF03466 LysR substrate binding domain HQN79_10795 PF03466 LysR substrate binding domain HQN79_10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQN79_10800 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain HQN79_10800 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HQN79_10805 PF00101 Ribulose bisphosphate carboxylase, small chain HQN79_10810 PF07728 AAA domain (dynein-related subfamily) HQN79_10810 PF08406 CbbQ/NirQ/NorQ C-terminal HQN79_10825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQN79_10825 PF00072 Response regulator receiver domain HQN79_10825 PF01627 Hpt domain HQN79_10825 PF00512 His Kinase A (phospho-acceptor) domain HQN79_10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_10825 PF00672 HAMP domain HQN79_10830 PF00072 Response regulator receiver domain HQN79_10835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_10835 PF02203 Tar ligand binding domain homologue HQN79_10835 PF00672 HAMP domain HQN79_10840 PF01116 Fructose-bisphosphate aldolase class-II HQN79_10845 PF00224 Pyruvate kinase, barrel domain HQN79_10845 PF02887 Pyruvate kinase, alpha/beta domain HQN79_10850 PF00162 Phosphoglycerate kinase HQN79_10855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQN79_10855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQN79_10860 PF00456 Transketolase, thiamine diphosphate binding domain HQN79_10860 PF02779 Transketolase, pyrimidine binding domain HQN79_10860 PF02780 Transketolase, C-terminal domain HQN79_10865 PF00873 AcrB/AcrD/AcrF family HQN79_10880 PF02687 FtsX-like permease family HQN79_10880 PF12704 MacB-like periplasmic core domain HQN79_10880 PF00005 ABC transporter HQN79_10885 PF02687 FtsX-like permease family HQN79_10885 PF00005 ABC transporter HQN79_10885 PF12704 MacB-like periplasmic core domain HQN79_10900 PF00893 Small Multidrug Resistance protein HQN79_10905 PF00999 Sodium/hydrogen exchanger family HQN79_10910 PF01966 HD domain HQN79_10910 PF12627 Probable RNA and SrmB- binding site of polymerase A HQN79_10910 PF01743 Poly A polymerase head domain HQN79_10920 PF05166 YcgL domain HQN79_10925 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQN79_10925 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQN79_10935 PF01810 LysE type translocator HQN79_10955 PF12161 HsdM N-terminal domain HQN79_10955 PF02384 N-6 DNA Methylase HQN79_10990 PF02595 Glycerate kinase family HQN79_10995 PF00128 Alpha amylase, catalytic domain HQN79_11020 PF01502 Phosphoribosyl-AMP cyclohydrolase HQN79_11025 PF01142 tRNA pseudouridine synthase D (TruD) HQN79_11040 PF03707 Bacterial signalling protein N terminal repeat HQN79_11040 PF00990 Diguanylate cyclase, GGDEF domain HQN79_11040 PF00563 EAL domain HQN79_11060 PF05175 Methyltransferase small domain HQN79_11065 PF00580 UvrD/REP helicase N-terminal domain HQN79_11065 PF13361 UvrD-like helicase C-terminal domain HQN79_11070 PF00465 Iron-containing alcohol dehydrogenase HQN79_11075 PF00691 OmpA family HQN79_11075 PF05736 OprF membrane domain HQN79_11080 PF03412 Peptidase C39 family HQN79_11080 PF00005 ABC transporter HQN79_11080 PF00664 ABC transporter transmembrane region HQN79_11085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_11085 PF00529 HlyD membrane-fusion protein of T1SS HQN79_11090 PF00196 Bacterial regulatory proteins, luxR family HQN79_11090 PF00072 Response regulator receiver domain HQN79_11095 PF02321 Outer membrane efflux protein HQN79_11100 PF03480 Bacterial extracellular solute-binding protein, family 7 HQN79_11105 PF02203 Tar ligand binding domain homologue HQN79_11105 PF00672 HAMP domain HQN79_11105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HQN79_11110 PF00226 DnaJ domain HQN79_11110 PF01556 DnaJ C terminal domain HQN79_11120 PF00593 TonB dependent receptor HQN79_11120 PF07715 TonB-dependent Receptor Plug Domain HQN79_11140 PF00578 AhpC/TSA family HQN79_11145 PF03649 Uncharacterised protein family (UPF0014) HQN79_11150 PF00005 ABC transporter HQN79_11155 PF13361 UvrD-like helicase C-terminal domain HQN79_11155 PF00580 UvrD/REP helicase N-terminal domain HQN79_11160 PF00085 Thioredoxin HQN79_11165 PF07498 Rho termination factor, N-terminal domain HQN79_11165 PF07497 Rho termination factor, RNA-binding domain HQN79_11165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_11170 PF01197 Ribosomal protein L31 HQN79_11180 PF01208 Uroporphyrinogen decarboxylase (URO-D) HQN79_11185 PF04362 Bacterial Fe(2+) trafficking HQN79_11190 PF10576 Iron-sulfur binding domain of endonuclease III HQN79_11190 PF00633 Helix-hairpin-helix motif HQN79_11190 PF14815 NUDIX domain HQN79_11190 PF00730 HhH-GPD superfamily base excision DNA repair protein HQN79_11195 PF02390 Putative methyltransferase HQN79_11210 PF06969 HemN C-terminal domain HQN79_11210 PF04055 Radical SAM superfamily HQN79_11215 PF07690 Major Facilitator Superfamily HQN79_11220 PF01725 Ham1 family HQN79_11225 PF01138 3' exoribonuclease family, domain 1 HQN79_11225 PF03725 3' exoribonuclease family, domain 2 HQN79_11230 PF03755 YicC-like family, N-terminal region HQN79_11230 PF08340 Domain of unknown function (DUF1732) HQN79_11240 PF17092 Penicillin-binding protein OB-like domain HQN79_11240 PF00905 Penicillin binding protein transpeptidase domain HQN79_11240 PF00912 Transglycosylase HQN79_11245 PF03881 Fructosamine kinase HQN79_11250 PF05191 Adenylate kinase, active site lid HQN79_11260 PF00873 AcrB/AcrD/AcrF family HQN79_11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_11275 PF00672 HAMP domain HQN79_11275 PF00512 His Kinase A (phospho-acceptor) domain HQN79_11280 PF00486 Transcriptional regulatory protein, C terminal HQN79_11280 PF00072 Response regulator receiver domain HQN79_11285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQN79_11290 PF00873 AcrB/AcrD/AcrF family HQN79_11295 PF11849 Domain of unknown function (DUF3369) HQN79_11300 PF08448 PAS fold HQN79_11300 PF00990 Diguanylate cyclase, GGDEF domain HQN79_11310 PF00072 Response regulator receiver domain HQN79_11310 PF01627 Hpt domain HQN79_11310 PF00512 His Kinase A (phospho-acceptor) domain HQN79_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_11310 PF00672 HAMP domain HQN79_11310 PF17149 Periplasmic sensor domain found in signal transduction proteins HQN79_11315 PF00072 Response regulator receiver domain HQN79_11325 PF18030 RimK PreATP-grasp domain HQN79_11325 PF08443 RimK-like ATP-grasp domain HQN79_11350 PF11965 Domain of unknown function (DUF3479) HQN79_11350 PF02514 CobN/Magnesium Chelatase HQN79_11355 PF07715 TonB-dependent Receptor Plug Domain HQN79_11355 PF00593 TonB dependent receptor HQN79_11365 PF01048 Phosphorylase superfamily HQN79_11370 PF02664 S-Ribosylhomocysteinase (LuxS) HQN79_11385 PF01243 Pyridoxamine 5'-phosphate oxidase HQN79_11385 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HQN79_11405 PF00248 Aldo/keto reductase family HQN79_11440 PF00072 Response regulator receiver domain HQN79_11440 PF08769 Sporulation initiation factor Spo0A C terminal HQN79_11450 PF00672 HAMP domain HQN79_11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQN79_11450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HQN79_11450 PF00072 Response regulator receiver domain HQN79_11450 PF01627 Hpt domain HQN79_11450 PF00512 His Kinase A (phospho-acceptor) domain HQN79_11460 PF00543 Nitrogen regulatory protein P-II HQN79_11465 PF00909 Ammonium Transporter Family HQN79_11475 PF00958 GMP synthase C terminal domain HQN79_11475 PF00117 Glutamine amidotransferase class-I HQN79_11480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQN79_11480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQN79_11485 PF01645 Conserved region in glutamate synthase HQN79_11490 PF01493 GXGXG motif HQN79_11500 PF00120 Glutamine synthetase, catalytic domain HQN79_11510 PF01571 Aminomethyltransferase folate-binding domain HQN79_11510 PF08669 Glycine cleavage T-protein C-terminal barrel domain HQN79_11510 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_11510 PF17806 Sarcosine oxidase A3 domain HQN79_11515 PF04267 Sarcosine oxidase, delta subunit family HQN79_11520 PF01266 FAD dependent oxidoreductase HQN79_11525 PF00551 Formyl transferase HQN79_11525 PF01842 ACT domain HQN79_11530 PF00005 ABC transporter HQN79_11530 PF08402 TOBE domain HQN79_11535 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_11540 PF13416 Bacterial extracellular solute-binding protein HQN79_11545 PF02560 Cyanate lyase C-terminal domain HQN79_11560 PF18113 Rubredoxin binding C-terminal domain HQN79_11560 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQN79_11570 PF00158 Sigma-54 interaction domain HQN79_11570 PF13185 GAF domain HQN79_11570 PF02954 Bacterial regulatory protein, Fis family HQN79_11580 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_11590 PF00005 ABC transporter HQN79_11595 PF01590 GAF domain HQN79_11595 PF00158 Sigma-54 interaction domain HQN79_11605 PF00528 Binding-protein-dependent transport system inner membrane component HQN79_11610 PF00005 ABC transporter HQN79_11630 PF00224 Pyruvate kinase, barrel domain HQN79_11630 PF02887 Pyruvate kinase, alpha/beta domain HQN79_11640 PF02222 ATP-grasp domain HQN79_11640 PF01370 NAD dependent epimerase/dehydratase family HQN79_11650 PF04542 Sigma-70 region 2 HQN79_11650 PF04545 Sigma-70, region 4 HQN79_11650 PF00140 Sigma-70 factor, region 1.2 HQN79_11660 PF12867 DinB superfamily HQN79_11660 PF03781 Sulfatase-modifying factor enzyme 1 HQN79_11665 PF00155 Aminotransferase class I and II HQN79_11680 PF01263 Aldose 1-epimerase HQN79_11685 PF01761 3-dehydroquinate synthase HQN79_11690 PF01202 Shikimate kinase HQN79_11695 PF00625 Guanylate kinase HQN79_11700 PF01192 RNA polymerase Rpb6 HQN79_11705 PF13291 ACT domain HQN79_11705 PF02824 TGS domain HQN79_11705 PF04607 Region found in RelA / SpoT proteins HQN79_11710 PF01042 Endoribonuclease L-PSP HQN79_11740 PF00210 Ferritin-like domain HQN79_11745 PF03707 Bacterial signalling protein N terminal repeat HQN79_11745 PF00990 Diguanylate cyclase, GGDEF domain HQN79_11745 PF00563 EAL domain HQN79_11760 PF04345 Chorismate lyase HQN79_11775 PF01040 UbiA prenyltransferase family HQN79_11785 PF12804 MobA-like NTP transferase domain HQN79_11785 PF00132 Bacterial transferase hexapeptide (six repeats) HQN79_11790 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HQN79_11790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HQN79_11795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_11795 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQN79_11800 PF00231 ATP synthase HQN79_11805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQN79_11805 PF00306 ATP synthase alpha/beta chain, C terminal domain HQN79_11805 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQN79_11810 PF00213 ATP synthase delta (OSCP) subunit HQN79_11815 PF00430 ATP synthase B/B' CF(0) HQN79_11820 PF00137 ATP synthase subunit C HQN79_11825 PF00119 ATP synthase A chain HQN79_11840 PF02195 ParB-like nuclease domain HQN79_11840 PF17762 HTH domain found in ParB protein HQN79_11845 PF13614 AAA domain HQN79_11855 PF13932 GidA associated domain HQN79_11855 PF01134 Glucose inhibited division protein A HQN79_11875 PF00474 Sodium:solute symporter family HQN79_11880 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HQN79_11880 PF14489 QueF-like protein HQN79_11915 PF00850 Histone deacetylase domain HQN79_11925 PF09186 Domain of unknown function (DUF1949) HQN79_11925 PF01205 Uncharacterized protein family UPF0029 HQN79_11930 PF00873 AcrB/AcrD/AcrF family HQN79_11945 PF01914 MarC family integral membrane protein HQN79_11955 PF12631 MnmE helical domain HQN79_11955 PF10396 GTP-binding protein TrmE N-terminus HQN79_11955 PF01926 50S ribosome-binding GTPase HQN79_11965 PF02096 60Kd inner membrane protein HQN79_11965 PF14849 YidC periplasmic domain HQN79_11970 PF00825 Ribonuclease P HQN79_11975 PF00468 Ribosomal protein L34 HQN79_11985 PF01925 Sulfite exporter TauE/SafE