locus-tag class description THMIRHAS_00010 PF11638 DnaA N-terminal domain THMIRHAS_00010 PF08299 Bacterial dnaA protein helix-turn-helix THMIRHAS_00010 PF00308 Bacterial dnaA protein THMIRHAS_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain THMIRHAS_00020 PF02767 DNA polymerase III beta subunit, central domain THMIRHAS_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain THMIRHAS_00030 PF16916 Dimerisation domain of Zinc Transporter THMIRHAS_00030 PF01545 Cation efflux family THMIRHAS_00040 PF02463 RecF/RecN/SMC N terminal domain THMIRHAS_00060 PF18053 DNA gyrase B subunit insert domain THMIRHAS_00060 PF00986 DNA gyrase B subunit, carboxyl terminus THMIRHAS_00060 PF00204 DNA gyrase B THMIRHAS_00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_00060 PF01751 Toprim domain THMIRHAS_00070 PF00485 Phosphoribulokinase / Uridine kinase family THMIRHAS_00110 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00110 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00110 PF13817 IS66 C-terminal element THMIRHAS_00110 PF03050 Transposase IS66 family THMIRHAS_00120 PF05717 IS66 Orf2 like protein THMIRHAS_00160 PF03050 Transposase IS66 family THMIRHAS_00160 PF13817 IS66 C-terminal element THMIRHAS_00160 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00160 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THMIRHAS_00180 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THMIRHAS_00180 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THMIRHAS_00190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THMIRHAS_00190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THMIRHAS_00210 PF04542 Sigma-70 region 2 THMIRHAS_00210 PF08281 Sigma-70, region 4 THMIRHAS_00230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain THMIRHAS_00230 PF17770 Ribonuclease J C-terminal domain THMIRHAS_00230 PF12706 Beta-lactamase superfamily domain THMIRHAS_00280 PF10137 Predicted nucleotide-binding protein containing TIR-like domain THMIRHAS_00300 PF00682 HMGL-like THMIRHAS_00300 PF08502 LeuA allosteric (dimerisation) domain THMIRHAS_00310 PF01037 Lrp/AsnC ligand binding domain THMIRHAS_00320 PF06965 Na+/H+ antiporter 1 THMIRHAS_00330 PF04333 MlaA lipoprotein THMIRHAS_00340 PF03466 LysR substrate binding domain THMIRHAS_00340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_00350 PF00881 Nitroreductase family THMIRHAS_00370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAS_00370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAS_00370 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAS_00380 PF13462 Thioredoxin THMIRHAS_00390 PF01578 Cytochrome C assembly protein THMIRHAS_00400 PF05140 ResB-like family THMIRHAS_00410 PF01926 50S ribosome-binding GTPase THMIRHAS_00430 PF01367 5'-3' exonuclease, C-terminal SAM fold THMIRHAS_00430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THMIRHAS_00430 PF01612 3'-5' exonuclease THMIRHAS_00430 PF00476 DNA polymerase family A THMIRHAS_00440 PF01636 Phosphotransferase enzyme family THMIRHAS_00450 PF01300 Telomere recombination THMIRHAS_00480 PF01218 Coproporphyrinogen III oxidase THMIRHAS_00490 PF17850 CysA C-terminal regulatory domain THMIRHAS_00490 PF00005 ABC transporter THMIRHAS_00510 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_00520 PF01479 S4 domain THMIRHAS_00530 PF03334 Na+/H+ antiporter subunit THMIRHAS_00540 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THMIRHAS_00560 PF00361 Proton-conducting membrane transporter THMIRHAS_00570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THMIRHAS_00580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMIRHAS_00580 PF00361 Proton-conducting membrane transporter THMIRHAS_00580 PF13244 Domain of unknown function (DUF4040) THMIRHAS_00580 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THMIRHAS_00590 PF08448 PAS fold THMIRHAS_00590 PF03705 CheR methyltransferase, all-alpha domain THMIRHAS_00590 PF01339 CheB methylesterase THMIRHAS_00590 PF01739 CheR methyltransferase, SAM binding domain THMIRHAS_00600 PF00563 EAL domain THMIRHAS_00600 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_00600 PF13426 PAS domain THMIRHAS_00610 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00610 PF03050 Transposase IS66 family THMIRHAS_00610 PF13817 IS66 C-terminal element THMIRHAS_00610 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00620 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00620 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00620 PF03050 Transposase IS66 family THMIRHAS_00620 PF13817 IS66 C-terminal element THMIRHAS_00640 PF13276 HTH-like domain THMIRHAS_00640 PF00665 Integrase core domain THMIRHAS_00640 PF13333 Integrase core domain THMIRHAS_00650 PF03050 Transposase IS66 family THMIRHAS_00650 PF13817 IS66 C-terminal element THMIRHAS_00650 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00650 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00660 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_00660 PF03050 Transposase IS66 family THMIRHAS_00660 PF13007 Transposase C of IS166 homeodomain THMIRHAS_00660 PF13817 IS66 C-terminal element THMIRHAS_00700 PF02690 Na+/Pi-cotransporter THMIRHAS_00720 PF00005 ABC transporter THMIRHAS_00770 PF01432 Peptidase family M3 THMIRHAS_00780 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase THMIRHAS_00810 PF05199 GMC oxidoreductase THMIRHAS_00810 PF00732 GMC oxidoreductase THMIRHAS_00820 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_00820 PF13426 PAS domain THMIRHAS_00820 PF00563 EAL domain THMIRHAS_00840 PF00873 AcrB/AcrD/AcrF family THMIRHAS_00850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAS_00870 PF04264 YceI-like domain THMIRHAS_00880 PF01292 Prokaryotic cytochrome b561 THMIRHAS_00890 PF03466 LysR substrate binding domain THMIRHAS_00890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_00910 PF01553 Acyltransferase THMIRHAS_00910 PF00501 AMP-binding enzyme THMIRHAS_00920 PF13607 Succinyl-CoA ligase like flavodoxin domain THMIRHAS_00920 PF13380 CoA binding domain THMIRHAS_00920 PF00583 Acetyltransferase (GNAT) family THMIRHAS_00930 PF00850 Histone deacetylase domain THMIRHAS_00960 PF07584 Aerotolerance regulator N-terminal THMIRHAS_00960 PF13519 von Willebrand factor type A domain THMIRHAS_00990 PF01882 Protein of unknown function DUF58 THMIRHAS_01000 PF17863 AAA lid domain THMIRHAS_01000 PF07726 ATPase family associated with various cellular activities (AAA) THMIRHAS_01030 PF13847 Methyltransferase domain THMIRHAS_01040 PF01223 DNA/RNA non-specific endonuclease THMIRHAS_01050 PF13649 Methyltransferase domain THMIRHAS_01060 PF08003 Protein of unknown function (DUF1698) THMIRHAS_01080 PF17863 AAA lid domain THMIRHAS_01080 PF07726 ATPase family associated with various cellular activities (AAA) THMIRHAS_01090 PF01882 Protein of unknown function DUF58 THMIRHAS_01140 PF00085 Thioredoxin THMIRHAS_01200 PF00156 Phosphoribosyl transferase domain THMIRHAS_01210 PF00206 Lyase THMIRHAS_01210 PF14698 Argininosuccinate lyase C-terminal THMIRHAS_01220 PF02683 Cytochrome C biogenesis protein transmembrane region THMIRHAS_01220 PF00085 Thioredoxin THMIRHAS_01220 PF11412 Disulphide bond corrector protein DsbC THMIRHAS_01230 PF03900 Porphobilinogen deaminase, C-terminal domain THMIRHAS_01230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain THMIRHAS_01240 PF02602 Uroporphyrinogen-III synthase HemD THMIRHAS_01280 PF02253 Phospholipase A1 THMIRHAS_01290 PF00175 Oxidoreductase NAD-binding domain THMIRHAS_01300 PF03372 Endonuclease/Exonuclease/phosphatase family THMIRHAS_01320 PF01842 ACT domain THMIRHAS_01320 PF00551 Formyl transferase THMIRHAS_01340 PF13718 GNAT acetyltransferase 2 THMIRHAS_01340 PF05127 Helicase THMIRHAS_01340 PF08351 Domain of unknown function (DUF1726) THMIRHAS_01340 PF17176 tRNA-binding domain THMIRHAS_01350 PF01641 SelR domain THMIRHAS_01360 PF01266 FAD dependent oxidoreductase THMIRHAS_01360 PF05430 S-adenosyl-L-methionine-dependent methyltransferase THMIRHAS_01380 PF08543 Phosphomethylpyrimidine kinase THMIRHAS_01420 PF08534 Redoxin THMIRHAS_01420 PF00462 Glutaredoxin THMIRHAS_01430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAS_01430 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_01460 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_01490 PF00141 Peroxidase THMIRHAS_01500 PF01488 Shikimate / quinate 5-dehydrogenase THMIRHAS_01500 PF08501 Shikimate dehydrogenase substrate binding domain THMIRHAS_01500 PF18317 Shikimate 5'-dehydrogenase C-terminal domain THMIRHAS_01520 PF00490 Delta-aminolevulinic acid dehydratase THMIRHAS_01560 PF04055 Radical SAM superfamily THMIRHAS_01560 PF06463 Molybdenum Cofactor Synthesis C THMIRHAS_01570 PF02597 ThiS family THMIRHAS_01580 PF02391 MoaE protein THMIRHAS_01590 PF03454 MoeA C-terminal region (domain IV) THMIRHAS_01590 PF03453 MoeA N-terminal region (domain I and II) THMIRHAS_01590 PF00994 Probable molybdopterin binding domain THMIRHAS_01610 PF01967 MoaC family THMIRHAS_01620 PF00563 EAL domain THMIRHAS_01620 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_01620 PF08448 PAS fold THMIRHAS_01640 PF00271 Helicase conserved C-terminal domain THMIRHAS_01640 PF00270 DEAD/DEAH box helicase THMIRHAS_01640 PF03880 DbpA RNA binding domain THMIRHAS_01650 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THMIRHAS_01690 PF18074 Primosomal protein N C-terminal domain THMIRHAS_01690 PF17764 3′ DNA-binding domain (3′BD) THMIRHAS_01690 PF00271 Helicase conserved C-terminal domain THMIRHAS_01690 PF00270 DEAD/DEAH box helicase THMIRHAS_01690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THMIRHAS_01700 PF08241 Methyltransferase domain THMIRHAS_01710 PF00561 alpha/beta hydrolase fold THMIRHAS_01730 PF01235 Sodium:alanine symporter family THMIRHAS_01740 PF15887 Putative zinc-binding metallo-peptidase THMIRHAS_01740 PF10005 zinc-ribbon domain THMIRHAS_01760 PF14403 Circularly permuted ATP-grasp type 2 THMIRHAS_01780 PF00155 Aminotransferase class I and II THMIRHAS_01790 PF04055 Radical SAM superfamily THMIRHAS_01790 PF06968 Biotin and Thiamin Synthesis associated domain THMIRHAS_01800 PF00156 Phosphoribosyl transferase domain THMIRHAS_01810 PF01545 Cation efflux family THMIRHAS_01830 PF03190 Protein of unknown function, DUF255 THMIRHAS_01840 PF00902 Sec-independent protein translocase protein (TatC) THMIRHAS_01850 PF02416 mttA/Hcf106 family THMIRHAS_01860 PF02416 mttA/Hcf106 family THMIRHAS_01870 PF01230 HIT domain THMIRHAS_01880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THMIRHAS_01890 PF00977 Histidine biosynthesis protein THMIRHAS_01900 PF00977 Histidine biosynthesis protein THMIRHAS_01910 PF00117 Glutamine amidotransferase class-I THMIRHAS_01920 PF00475 Imidazoleglycerol-phosphate dehydratase THMIRHAS_01930 PF00115 Cytochrome C and Quinol oxidase polypeptide I THMIRHAS_01960 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP THMIRHAS_01960 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THMIRHAS_01980 PF13746 4Fe-4S dicluster domain THMIRHAS_01980 PF12801 4Fe-4S binding domain THMIRHAS_01980 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase THMIRHAS_02000 PF00403 Heavy-metal-associated domain THMIRHAS_02050 PF00563 EAL domain THMIRHAS_02050 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_02050 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_02060 PF02580 D-Tyr-tRNA(Tyr) deacylase THMIRHAS_02070 PF00561 alpha/beta hydrolase fold THMIRHAS_02100 PF04143 Sulphur transport THMIRHAS_02130 PF00445 Ribonuclease T2 family THMIRHAS_02140 PF03350 Uncharacterized protein family, UPF0114 THMIRHAS_02160 PF00563 EAL domain THMIRHAS_02160 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_02160 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_02210 PF07152 YaeQ protein THMIRHAS_02220 PF00270 DEAD/DEAH box helicase THMIRHAS_02220 PF00271 Helicase conserved C-terminal domain THMIRHAS_02220 PF03880 DbpA RNA binding domain THMIRHAS_02230 PF09905 DNA-binding protein VF530 THMIRHAS_02240 PF00072 Response regulator receiver domain THMIRHAS_02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_02250 PF08447 PAS fold THMIRHAS_02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_02250 PF08447 PAS fold THMIRHAS_02260 PF00069 Protein kinase domain THMIRHAS_02270 PF01909 Nucleotidyltransferase domain THMIRHAS_02280 PF02965 Vitamin B12 dependent methionine synthase, activation domain THMIRHAS_02280 PF00809 Pterin binding enzyme THMIRHAS_02280 PF02607 B12 binding domain THMIRHAS_02280 PF02310 B12 binding domain THMIRHAS_02280 PF02574 Homocysteine S-methyltransferase THMIRHAS_02310 PF02574 Homocysteine S-methyltransferase THMIRHAS_02310 PF00809 Pterin binding enzyme THMIRHAS_02310 PF02310 B12 binding domain THMIRHAS_02310 PF02607 B12 binding domain THMIRHAS_02310 PF02965 Vitamin B12 dependent methionine synthase, activation domain THMIRHAS_02330 PF07694 5TMR of 5TMR-LYT THMIRHAS_02330 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_02340 PF05958 tRNA (Uracil-5-)-methyltransferase THMIRHAS_02350 PF01925 Sulfite exporter TauE/SafE THMIRHAS_02410 PF01171 PP-loop family THMIRHAS_02440 PF02386 Cation transport protein THMIRHAS_02450 PF02080 TrkA-C domain THMIRHAS_02450 PF02254 TrkA-N domain THMIRHAS_02460 PF00158 Sigma-54 interaction domain THMIRHAS_02460 PF00072 Response regulator receiver domain THMIRHAS_02460 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_02470 PF00672 HAMP domain THMIRHAS_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_02470 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_02470 PF00989 PAS fold THMIRHAS_02490 PF01029 NusB family THMIRHAS_02490 PF01189 16S rRNA methyltransferase RsmB/F THMIRHAS_02500 PF00551 Formyl transferase THMIRHAS_02500 PF02911 Formyl transferase, C-terminal domain THMIRHAS_02510 PF01327 Polypeptide deformylase THMIRHAS_02520 PF02481 DNA recombination-mediator protein A THMIRHAS_02520 PF17782 DprA winged helix domain THMIRHAS_02530 PF01751 Toprim domain THMIRHAS_02530 PF01131 DNA topoisomerase THMIRHAS_02530 PF13368 Topoisomerase C-terminal repeat THMIRHAS_02540 PF05746 DALR anticodon binding domain THMIRHAS_02540 PF03485 Arginyl tRNA synthetase N terminal domain THMIRHAS_02540 PF00750 tRNA synthetases class I (R) THMIRHAS_02560 PF00072 Response regulator receiver domain THMIRHAS_02560 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_02570 PF04380 Membrane fusogenic activity THMIRHAS_02580 PF13335 Magnesium chelatase, subunit ChlI C-terminal THMIRHAS_02580 PF01078 Magnesium chelatase, subunit ChlI THMIRHAS_02610 PF00072 Response regulator receiver domain THMIRHAS_02610 PF00196 Bacterial regulatory proteins, luxR family THMIRHAS_02620 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAS_02630 PF00005 ABC transporter THMIRHAS_02630 PF00664 ABC transporter transmembrane region THMIRHAS_02630 PF03412 Peptidase C39 family THMIRHAS_02640 PF05736 OprF membrane domain THMIRHAS_02640 PF00691 OmpA family THMIRHAS_02650 PF00465 Iron-containing alcohol dehydrogenase THMIRHAS_02660 PF13361 UvrD-like helicase C-terminal domain THMIRHAS_02660 PF00580 UvrD/REP helicase N-terminal domain THMIRHAS_02670 PF05175 Methyltransferase small domain THMIRHAS_02700 PF01142 tRNA pseudouridine synthase D (TruD) THMIRHAS_02710 PF01502 Phosphoribosyl-AMP cyclohydrolase THMIRHAS_02750 PF00128 Alpha amylase, catalytic domain THMIRHAS_02760 PF02595 Glycerate kinase family THMIRHAS_02800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain THMIRHAS_02800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain THMIRHAS_02810 PF05166 YcgL domain THMIRHAS_02830 PF12627 Probable RNA and SrmB- binding site of polymerase A THMIRHAS_02830 PF01966 HD domain THMIRHAS_02830 PF01743 Poly A polymerase head domain THMIRHAS_02840 PF00893 Small Multidrug Resistance protein THMIRHAS_02880 PF00873 AcrB/AcrD/AcrF family THMIRHAS_02890 PF02780 Transketolase, C-terminal domain THMIRHAS_02890 PF02779 Transketolase, pyrimidine binding domain THMIRHAS_02890 PF00456 Transketolase, thiamine diphosphate binding domain THMIRHAS_02900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THMIRHAS_02900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THMIRHAS_02910 PF00162 Phosphoglycerate kinase THMIRHAS_02920 PF00224 Pyruvate kinase, barrel domain THMIRHAS_02920 PF02887 Pyruvate kinase, alpha/beta domain THMIRHAS_02930 PF01116 Fructose-bisphosphate aldolase class-II THMIRHAS_02940 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THMIRHAS_02940 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THMIRHAS_02950 PF00101 Ribulose bisphosphate carboxylase, small chain THMIRHAS_03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_03070 PF03466 LysR substrate binding domain THMIRHAS_03110 PF13817 IS66 C-terminal element THMIRHAS_03110 PF13007 Transposase C of IS166 homeodomain THMIRHAS_03110 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_03110 PF03050 Transposase IS66 family THMIRHAS_03140 PF01259 SAICAR synthetase THMIRHAS_03160 PF00834 Ribulose-phosphate 3 epimerase family THMIRHAS_03170 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAS_03180 PF04715 Anthranilate synthase component I, N terminal region THMIRHAS_03180 PF00425 chorismate binding enzyme THMIRHAS_03190 PF00117 Glutamine amidotransferase class-I THMIRHAS_03200 PF00591 Glycosyl transferase family, a/b domain THMIRHAS_03200 PF02885 Glycosyl transferase family, helical bundle domain THMIRHAS_03210 PF04304 Protein of unknown function (DUF454) THMIRHAS_03220 PF07804 HipA-like C-terminal domain THMIRHAS_03270 PF00218 Indole-3-glycerol phosphate synthase THMIRHAS_03290 PF02675 S-adenosylmethionine decarboxylase THMIRHAS_03300 PF17284 Spermidine synthase tetramerisation domain THMIRHAS_03310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMIRHAS_03310 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMIRHAS_03320 PF02566 OsmC-like protein THMIRHAS_03330 PF01544 CorA-like Mg2+ transporter protein THMIRHAS_03340 PF00271 Helicase conserved C-terminal domain THMIRHAS_03340 PF00270 DEAD/DEAH box helicase THMIRHAS_03350 PF03641 Possible lysine decarboxylase THMIRHAS_03350 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases THMIRHAS_03350 PF11892 Domain of unknown function (DUF3412) THMIRHAS_03360 PF01594 AI-2E family transporter THMIRHAS_03420 PF02649 Type I GTP cyclohydrolase folE2 THMIRHAS_03430 PF07683 Cobalamin synthesis protein cobW C-terminal domain THMIRHAS_03430 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAS_03440 PF06039 Malate:quinone oxidoreductase (Mqo) THMIRHAS_03450 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_03450 PF08338 Domain of unknown function (DUF1731) THMIRHAS_03480 PF03702 Anhydro-N-acetylmuramic acid kinase THMIRHAS_03490 PF04225 Opacity-associated protein A LysM-like domain THMIRHAS_03490 PF01551 Peptidase family M23 THMIRHAS_03500 PF01206 Sulfurtransferase TusA THMIRHAS_03510 PF02091 Glycyl-tRNA synthetase alpha subunit THMIRHAS_03520 PF05746 DALR anticodon binding domain THMIRHAS_03520 PF02092 Glycyl-tRNA synthetase beta subunit THMIRHAS_03550 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_03580 PF03167 Uracil DNA glycosylase superfamily THMIRHAS_03590 PF00204 DNA gyrase B THMIRHAS_03590 PF01751 Toprim domain THMIRHAS_03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_03590 PF00986 DNA gyrase B subunit, carboxyl terminus THMIRHAS_03600 PF00072 Response regulator receiver domain THMIRHAS_03600 PF01627 Hpt domain THMIRHAS_03600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_03600 PF00672 HAMP domain THMIRHAS_03600 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_03600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_03620 PF08447 PAS fold THMIRHAS_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_03620 PF08447 PAS fold THMIRHAS_03620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_03640 PF02696 Uncharacterized ACR, YdiU/UPF0061 family THMIRHAS_03660 PF03989 DNA gyrase C-terminal domain, beta-propeller THMIRHAS_03660 PF00521 DNA gyrase/topoisomerase IV, subunit A THMIRHAS_03670 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_03680 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAS_03680 PF00691 OmpA family THMIRHAS_03690 PF00899 ThiF family THMIRHAS_03700 PF13847 Methyltransferase domain THMIRHAS_03700 PF17827 PrmC N-terminal domain THMIRHAS_03710 PF03462 PCRF domain THMIRHAS_03710 PF00472 RF-1 domain THMIRHAS_03720 PF01488 Shikimate / quinate 5-dehydrogenase THMIRHAS_03720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain THMIRHAS_03720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain THMIRHAS_03740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THMIRHAS_03740 PF14572 Phosphoribosyl synthetase-associated domain THMIRHAS_03750 PF14693 Ribosomal protein TL5, C-terminal domain THMIRHAS_03750 PF01386 Ribosomal L25p family THMIRHAS_03760 PF01195 Peptidyl-tRNA hydrolase THMIRHAS_03770 PF01926 50S ribosome-binding GTPase THMIRHAS_03770 PF06071 Protein of unknown function (DUF933) THMIRHAS_03930 PF13333 Integrase core domain THMIRHAS_03930 PF00665 Integrase core domain THMIRHAS_03930 PF13276 HTH-like domain THMIRHAS_03960 PF05717 IS66 Orf2 like protein THMIRHAS_03970 PF13817 IS66 C-terminal element THMIRHAS_03970 PF03050 Transposase IS66 family THMIRHAS_03970 PF13007 Transposase C of IS166 homeodomain THMIRHAS_03970 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_03990 PF13276 HTH-like domain THMIRHAS_03990 PF00665 Integrase core domain THMIRHAS_03990 PF13333 Integrase core domain THMIRHAS_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_04030 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_04030 PF01627 Hpt domain THMIRHAS_04030 PF00072 Response regulator receiver domain THMIRHAS_04030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_04030 PF00672 HAMP domain THMIRHAS_04040 PF00005 ABC transporter THMIRHAS_04060 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_04080 PF13185 GAF domain THMIRHAS_04080 PF00158 Sigma-54 interaction domain THMIRHAS_04080 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_04100 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_04100 PF18113 Rubredoxin binding C-terminal domain THMIRHAS_04130 PF02560 Cyanate lyase C-terminal domain THMIRHAS_04150 PF02203 Tar ligand binding domain homologue THMIRHAS_04150 PF00672 HAMP domain THMIRHAS_04150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_04160 PF00072 Response regulator receiver domain THMIRHAS_04200 PF00263 Bacterial type II and III secretion system protein THMIRHAS_04200 PF03958 Bacterial type II/III secretion system short domain THMIRHAS_04210 PF00437 Type II/IV secretion system protein THMIRHAS_04220 PF00482 Type II secretion system (T2SS), protein F THMIRHAS_04230 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_04230 PF08334 Type II secretion system (T2SS), protein G THMIRHAS_04240 PF12019 Type II transport protein GspH THMIRHAS_04240 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_04250 PF02501 Type II secretion system (T2SS), protein I THMIRHAS_04250 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_04260 PF11612 Type II secretion system (T2SS), protein J THMIRHAS_04260 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_04270 PF03934 Type II secretion system (T2SS), protein K THMIRHAS_04280 PF12693 GspL periplasmic domain THMIRHAS_04280 PF05134 Type II secretion system (T2SS), protein L THMIRHAS_04310 PF05922 Peptidase inhibitor I9 THMIRHAS_04310 PF00082 Subtilase family THMIRHAS_04350 PF03109 ABC1 family THMIRHAS_04370 PF01209 ubiE/COQ5 methyltransferase family THMIRHAS_04390 PF07724 AAA domain (Cdc48 subfamily) THMIRHAS_04390 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_04400 PF01678 Diaminopimelate epimerase THMIRHAS_04420 PF00589 Phage integrase family THMIRHAS_04420 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAS_04430 PF00227 Proteasome subunit THMIRHAS_04460 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THMIRHAS_04470 PF01380 SIS domain THMIRHAS_04470 PF00571 CBS domain THMIRHAS_04490 PF00483 Nucleotidyl transferase THMIRHAS_04510 PF02446 4-alpha-glucanotransferase THMIRHAS_04520 PF00128 Alpha amylase, catalytic domain THMIRHAS_04520 PF02806 Alpha amylase, C-terminal all-beta domain THMIRHAS_04520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THMIRHAS_04530 PF00534 Glycosyl transferases group 1 THMIRHAS_04530 PF08323 Starch synthase catalytic domain THMIRHAS_04540 PF00343 Carbohydrate phosphorylase THMIRHAS_04550 PF01380 SIS domain THMIRHAS_04570 PF01061 ABC-2 type transporter THMIRHAS_04580 PF00005 ABC transporter THMIRHAS_04610 PF00534 Glycosyl transferases group 1 THMIRHAS_04620 PF16363 GDP-mannose 4,6 dehydratase THMIRHAS_04630 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_04650 PF00211 Adenylate and Guanylate cyclase catalytic domain THMIRHAS_04670 PF13545 Crp-like helix-turn-helix domain THMIRHAS_04670 PF00027 Cyclic nucleotide-binding domain THMIRHAS_04770 PF06067 Domain of unknown function (DUF932) THMIRHAS_04780 PF04002 RadC-like JAB domain THMIRHAS_04800 PF00589 Phage integrase family THMIRHAS_04820 PF05973 Phage derived protein Gp49-like (DUF891) THMIRHAS_04850 PF13847 Methyltransferase domain THMIRHAS_04850 PF10119 Predicted methyltransferase regulatory domain THMIRHAS_04880 PF18340 DNA relaxase TraI 2B/2B-like domain THMIRHAS_04880 PF07057 DNA helicase TraI THMIRHAS_04880 PF18272 single-stranded DNA binding TraI N-terminal subdomain THMIRHAS_04880 PF08751 TrwC relaxase THMIRHAS_04960 PF00589 Phage integrase family THMIRHAS_05010 PF13817 IS66 C-terminal element THMIRHAS_05010 PF03050 Transposase IS66 family THMIRHAS_05010 PF13007 Transposase C of IS166 homeodomain THMIRHAS_05010 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_05060 PF00483 Nucleotidyl transferase THMIRHAS_05060 PF01050 Mannose-6-phosphate isomerase THMIRHAS_05080 PF02321 Outer membrane efflux protein THMIRHAS_05090 PF00664 ABC transporter transmembrane region THMIRHAS_05090 PF00005 ABC transporter THMIRHAS_05100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAS_05100 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAS_05110 PF02397 Bacterial sugar transferase THMIRHAS_05130 PF01022 Bacterial regulatory protein, arsR family THMIRHAS_05140 PF13180 PDZ domain THMIRHAS_05140 PF03572 Peptidase family S41 THMIRHAS_05150 PF01965 DJ-1/PfpI family THMIRHAS_05160 PF05378 Hydantoinase/oxoprolinase N-terminal region THMIRHAS_05160 PF01968 Hydantoinase/oxoprolinase THMIRHAS_05170 PF03631 Virulence factor BrkB THMIRHAS_05180 PF01032 FecCD transport family THMIRHAS_05190 PF00005 ABC transporter THMIRHAS_05200 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THMIRHAS_05230 PF05016 ParE toxin of type II toxin-antitoxin system, parDE THMIRHAS_05240 PF04221 RelB antitoxin THMIRHAS_05250 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THMIRHAS_05250 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THMIRHAS_05300 PF00268 Ribonucleotide reductase, small chain THMIRHAS_05310 PF00916 Sulfate permease family THMIRHAS_05310 PF01740 STAS domain THMIRHAS_05320 PF00696 Amino acid kinase family THMIRHAS_05320 PF13840 ACT domain THMIRHAS_05330 PF02417 Chromate transporter THMIRHAS_05340 PF06339 Ectoine synthase THMIRHAS_05350 PF00202 Aminotransferase class-III THMIRHAS_05360 PF00583 Acetyltransferase (GNAT) family THMIRHAS_05380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THMIRHAS_05380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THMIRHAS_05420 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_05420 PF09308 LuxQ, periplasmic THMIRHAS_05420 PF00072 Response regulator receiver domain THMIRHAS_05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_05430 PF00072 Response regulator receiver domain THMIRHAS_05430 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_05440 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_05440 PF18719 ArlS sensor domain THMIRHAS_05460 PF08534 Redoxin THMIRHAS_05470 PF05724 Thiopurine S-methyltransferase (TPMT) THMIRHAS_05480 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAS_05500 PF00459 Inositol monophosphatase family THMIRHAS_05520 PF01774 UreD urease accessory protein THMIRHAS_05530 PF00547 Urease, gamma subunit THMIRHAS_05540 PF00699 Urease beta subunit THMIRHAS_05550 PF01979 Amidohydrolase family THMIRHAS_05550 PF00449 Urease alpha-subunit, N-terminal domain THMIRHAS_05560 PF02814 UreE urease accessory protein, N-terminal domain THMIRHAS_05560 PF05194 UreE urease accessory protein, C-terminal domain THMIRHAS_05570 PF01730 UreF THMIRHAS_05580 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAS_05610 PF00005 ABC transporter THMIRHAS_05620 PF00005 ABC transporter THMIRHAS_05620 PF12399 Branched-chain amino acid ATP-binding cassette transporter THMIRHAS_05640 PF02653 Branched-chain amino acid transport system / permease component THMIRHAS_05660 PF03477 ATP cone domain THMIRHAS_05660 PF00317 Ribonucleotide reductase, all-alpha domain THMIRHAS_05660 PF02867 Ribonucleotide reductase, barrel domain THMIRHAS_05670 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAS_05670 PF07683 Cobalamin synthesis protein cobW C-terminal domain THMIRHAS_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_05690 PF03459 TOBE domain THMIRHAS_05760 PF00873 AcrB/AcrD/AcrF family THMIRHAS_05790 PF14743 DNA ligase OB-like domain THMIRHAS_05790 PF01068 ATP dependent DNA ligase domain THMIRHAS_05800 PF00155 Aminotransferase class I and II THMIRHAS_05810 PF04851 Type III restriction enzyme, res subunit THMIRHAS_05810 PF02151 UvrB/uvrC motif THMIRHAS_05810 PF17757 UvrB interaction domain THMIRHAS_05810 PF12344 Ultra-violet resistance protein B THMIRHAS_05810 PF00271 Helicase conserved C-terminal domain THMIRHAS_05840 PF00246 Zinc carboxypeptidase THMIRHAS_05850 PF00437 Type II/IV secretion system protein THMIRHAS_05860 PF00437 Type II/IV secretion system protein THMIRHAS_05880 PF00883 Cytosol aminopeptidase family, catalytic domain THMIRHAS_05880 PF02789 Cytosol aminopeptidase family, N-terminal domain THMIRHAS_05890 PF03739 Lipopolysaccharide export system permease LptF/LptG THMIRHAS_05900 PF03739 Lipopolysaccharide export system permease LptF/LptG THMIRHAS_05910 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ THMIRHAS_05920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAS_05920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAS_05920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAS_05920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAS_05930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THMIRHAS_05930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THMIRHAS_05930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THMIRHAS_05940 PF00342 Phosphoglucose isomerase THMIRHAS_05950 PF00483 Nucleotidyl transferase THMIRHAS_05960 PF00072 Response regulator receiver domain THMIRHAS_05970 PF00717 Peptidase S24-like THMIRHAS_06010 PF00072 Response regulator receiver domain THMIRHAS_06010 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_06040 PF03441 FAD binding domain of DNA photolyase THMIRHAS_06040 PF00875 DNA photolyase THMIRHAS_06060 PF03144 Elongation factor Tu domain 2 THMIRHAS_06060 PF16658 Class II release factor RF3, C-terminal domain THMIRHAS_06060 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_06090 PF02355 Protein export membrane protein THMIRHAS_06090 PF07549 SecD/SecF GG Motif THMIRHAS_06100 PF07549 SecD/SecF GG Motif THMIRHAS_06100 PF13721 SecD export protein N-terminal TM region THMIRHAS_06100 PF02355 Protein export membrane protein THMIRHAS_06110 PF02699 Preprotein translocase subunit THMIRHAS_06120 PF01702 Queuine tRNA-ribosyltransferase THMIRHAS_06130 PF02547 Queuosine biosynthesis protein THMIRHAS_06170 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_06170 PF03050 Transposase IS66 family THMIRHAS_06170 PF13817 IS66 C-terminal element THMIRHAS_06170 PF13007 Transposase C of IS166 homeodomain THMIRHAS_06240 PF00239 Resolvase, N terminal domain THMIRHAS_06240 PF02796 Helix-turn-helix domain of resolvase THMIRHAS_06300 PF02563 Polysaccharide biosynthesis/export protein THMIRHAS_06310 PF13614 AAA domain THMIRHAS_06310 PF02706 Chain length determinant protein THMIRHAS_06310 PF13807 G-rich domain on putative tyrosine kinase THMIRHAS_06340 PF01380 SIS domain THMIRHAS_06350 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THMIRHAS_06350 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THMIRHAS_06370 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_06380 PF17761 DUF1016 N-terminal domain THMIRHAS_06380 PF06250 YhcG PDDEXK nuclease domain THMIRHAS_06390 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_06400 PF01943 Polysaccharide biosynthesis protein THMIRHAS_06400 PF14667 Polysaccharide biosynthesis C-terminal domain THMIRHAS_06410 PF01501 Glycosyl transferase family 8 THMIRHAS_06410 PF00535 Glycosyl transferase family 2 THMIRHAS_06420 PF00535 Glycosyl transferase family 2 THMIRHAS_06440 PF13439 Glycosyltransferase Family 4 THMIRHAS_06440 PF00534 Glycosyl transferases group 1 THMIRHAS_06450 PF01757 Acyltransferase family THMIRHAS_06460 PF00534 Glycosyl transferases group 1 THMIRHAS_06460 PF13439 Glycosyltransferase Family 4 THMIRHAS_06470 PF00534 Glycosyl transferases group 1 THMIRHAS_06470 PF13477 Glycosyl transferase 4-like THMIRHAS_06480 PF01757 Acyltransferase family THMIRHAS_06490 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_06500 PF02397 Bacterial sugar transferase THMIRHAS_06530 PF16363 GDP-mannose 4,6 dehydratase THMIRHAS_06560 PF13476 AAA domain THMIRHAS_06580 PF02397 Bacterial sugar transferase THMIRHAS_06610 PF02719 Polysaccharide biosynthesis protein THMIRHAS_06630 PF08238 Sel1 repeat THMIRHAS_06640 PF00691 OmpA family THMIRHAS_06640 PF05736 OprF membrane domain THMIRHAS_06650 PF01769 Divalent cation transporter THMIRHAS_06650 PF03448 MgtE intracellular N domain THMIRHAS_06650 PF00571 CBS domain THMIRHAS_06660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THMIRHAS_06670 PF12399 Branched-chain amino acid ATP-binding cassette transporter THMIRHAS_06670 PF00005 ABC transporter THMIRHAS_06710 PF01699 Sodium/calcium exchanger protein THMIRHAS_06730 PF00005 ABC transporter THMIRHAS_06740 PF02405 Permease MlaE THMIRHAS_06750 PF02470 MlaD protein THMIRHAS_06780 PF00005 ABC transporter THMIRHAS_06790 PF01061 ABC-2 type transporter THMIRHAS_06810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMIRHAS_06820 PF01634 ATP phosphoribosyltransferase THMIRHAS_06830 PF00815 Histidinol dehydrogenase THMIRHAS_06840 PF01784 NIF3 (NGG1p interacting factor 3) THMIRHAS_06850 PF00355 Rieske [2Fe-2S] domain THMIRHAS_06850 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal THMIRHAS_06860 PF00033 Cytochrome b/b6/petB THMIRHAS_06860 PF00032 Cytochrome b(C-terminal)/b6/petD THMIRHAS_06870 PF02167 Cytochrome C1 family THMIRHAS_06880 PF01645 Conserved region in glutamate synthase THMIRHAS_06890 PF18073 Rubredoxin metal binding domain THMIRHAS_06900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) THMIRHAS_06920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) THMIRHAS_06930 PF00459 Inositol monophosphatase family THMIRHAS_06940 PF03471 Transporter associated domain THMIRHAS_06940 PF00571 CBS domain THMIRHAS_06940 PF01595 Cyclin M transmembrane N-terminal domain THMIRHAS_06960 PF00448 SRP54-type protein, GTPase domain THMIRHAS_06960 PF02881 SRP54-type protein, helical bundle domain THMIRHAS_06960 PF02978 Signal peptide binding domain THMIRHAS_06970 PF00886 Ribosomal protein S16 THMIRHAS_06980 PF01782 RimM N-terminal domain THMIRHAS_06980 PF05239 PRC-barrel domain THMIRHAS_06990 PF01746 tRNA (Guanine-1)-methyltransferase THMIRHAS_07000 PF01245 Ribosomal protein L19 THMIRHAS_07010 PF00589 Phage integrase family THMIRHAS_07010 PF02899 Phage integrase, N-terminal SAM-like domain THMIRHAS_07020 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_07020 PF00072 Response regulator receiver domain THMIRHAS_07020 PF09308 LuxQ, periplasmic THMIRHAS_07040 PF10411 Disulfide bond isomerase protein N-terminus THMIRHAS_07040 PF13098 Thioredoxin-like domain THMIRHAS_07100 PF10458 Valyl tRNA synthetase tRNA binding arm THMIRHAS_07100 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAS_07100 PF08264 Anticodon-binding domain of tRNA THMIRHAS_07110 PF00669 Bacterial flagellin N-terminal helical region THMIRHAS_07110 PF00700 Bacterial flagellin C-terminal helical region THMIRHAS_07140 PF00909 Ammonium Transporter Family THMIRHAS_07150 PF00543 Nitrogen regulatory protein P-II THMIRHAS_07170 PF03710 Glutamate-ammonia ligase adenylyltransferase THMIRHAS_07170 PF08335 GlnD PII-uridylyltransferase THMIRHAS_07180 PF03951 Glutamine synthetase, beta-Grasp domain THMIRHAS_07180 PF00120 Glutamine synthetase, catalytic domain THMIRHAS_07200 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_07210 PF00005 ABC transporter THMIRHAS_07220 PF01895 PhoU domain THMIRHAS_07230 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_07230 PF00072 Response regulator receiver domain THMIRHAS_07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_07240 PF11808 Phosphate regulon sensor protein PhoR THMIRHAS_07240 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_07240 PF00989 PAS fold THMIRHAS_07250 PF00072 Response regulator receiver domain THMIRHAS_07270 PF03150 Di-haem cytochrome c peroxidase THMIRHAS_07300 PF01384 Phosphate transporter family THMIRHAS_07310 PF12849 PBP superfamily domain THMIRHAS_07320 PF00111 2Fe-2S iron-sulfur cluster binding domain THMIRHAS_07350 PF01722 BolA-like protein THMIRHAS_07370 PF00149 Calcineurin-like phosphoesterase THMIRHAS_07380 PF00398 Ribosomal RNA adenine dimethylase THMIRHAS_07390 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THMIRHAS_07400 PF00639 PPIC-type PPIASE domain THMIRHAS_07400 PF09312 SurA N-terminal domain THMIRHAS_07410 PF04453 LPS transport system D THMIRHAS_07410 PF03968 OstA-like protein THMIRHAS_07420 PF01636 Phosphotransferase enzyme family THMIRHAS_07430 PF00483 Nucleotidyl transferase THMIRHAS_07440 PF03775 Septum formation inhibitor MinC, C-terminal domain THMIRHAS_07440 PF05209 Septum formation inhibitor MinC, N-terminal domain THMIRHAS_07450 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAS_07460 PF03776 Septum formation topological specificity factor MinE THMIRHAS_07470 PF03883 Peroxide stress protein YaaA THMIRHAS_07480 PF01430 Hsp33 protein THMIRHAS_07530 PF00145 C-5 cytosine-specific DNA methylase THMIRHAS_07550 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain THMIRHAS_07550 PF17203 Single cache domain 3 THMIRHAS_07550 PF00989 PAS fold THMIRHAS_07550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_07560 PF03852 DNA mismatch endonuclease Vsr THMIRHAS_07580 PF04055 Radical SAM superfamily THMIRHAS_07580 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family THMIRHAS_07590 PF03099 Biotin/lipoate A/B protein ligase family THMIRHAS_07600 PF04359 Protein of unknown function (DUF493) THMIRHAS_07610 PF07943 Penicillin-binding protein 5, C-terminal domain THMIRHAS_07610 PF00768 D-alanyl-D-alanine carboxypeptidase THMIRHAS_07620 PF01098 Cell cycle protein THMIRHAS_07630 PF03717 Penicillin-binding Protein dimerisation domain THMIRHAS_07630 PF00905 Penicillin binding protein transpeptidase domain THMIRHAS_07650 PF04085 rod shape-determining protein MreC THMIRHAS_07670 PF02686 Glu-tRNAGln amidotransferase C subunit THMIRHAS_07680 PF01425 Amidase THMIRHAS_07690 PF02637 GatB domain THMIRHAS_07690 PF02934 GatB/GatE catalytic domain THMIRHAS_07720 PF01435 Peptidase family M48 THMIRHAS_07730 PF02657 Fe-S metabolism associated domain THMIRHAS_07740 PF03544 Gram-negative bacterial TonB protein C-terminal THMIRHAS_07750 PF02472 Biopolymer transport protein ExbD/TolR THMIRHAS_07760 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_07770 PF00753 Metallo-beta-lactamase superfamily THMIRHAS_07790 PF07660 Secretin and TonB N terminus short domain THMIRHAS_07790 PF00593 TonB dependent receptor THMIRHAS_07790 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_07840 PF00571 CBS domain THMIRHAS_07840 PF00478 IMP dehydrogenase / GMP reductase domain THMIRHAS_07850 PF02540 NAD synthase THMIRHAS_07850 PF00958 GMP synthase C terminal domain THMIRHAS_07850 PF00117 Glutamine amidotransferase class-I THMIRHAS_07860 PF14437 MafB19-like deaminase THMIRHAS_07870 PF03975 CheD chemotactic sensory transduction THMIRHAS_07880 PF02895 Signal transducing histidine kinase, homodimeric domain THMIRHAS_07880 PF01627 Hpt domain THMIRHAS_07880 PF01584 CheW-like domain THMIRHAS_07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_07910 PF00183 Hsp90 protein THMIRHAS_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_07920 PF09308 LuxQ, periplasmic THMIRHAS_07920 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_07920 PF00072 Response regulator receiver domain THMIRHAS_07940 PF00795 Carbon-nitrogen hydrolase THMIRHAS_07980 PF01624 MutS domain I THMIRHAS_07980 PF05192 MutS domain III THMIRHAS_07980 PF05190 MutS family domain IV THMIRHAS_07980 PF00488 MutS domain V THMIRHAS_07980 PF05188 MutS domain II THMIRHAS_08020 PF11855 Protein of unknown function (DUF3375) THMIRHAS_08070 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_08070 PF13007 Transposase C of IS166 homeodomain THMIRHAS_08070 PF13817 IS66 C-terminal element THMIRHAS_08070 PF03050 Transposase IS66 family THMIRHAS_08080 PF05717 IS66 Orf2 like protein THMIRHAS_08120 PF02599 Global regulator protein family THMIRHAS_08130 PF02272 DHHA1 domain THMIRHAS_08130 PF01411 tRNA synthetases class II (A) THMIRHAS_08130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMIRHAS_08140 PF02631 RecX family THMIRHAS_08150 PF00154 recA bacterial DNA recombination protein THMIRHAS_08160 PF02464 Competence-damaged protein THMIRHAS_08170 PF00072 Response regulator receiver domain THMIRHAS_08170 PF13426 PAS domain THMIRHAS_08170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_08180 PF00563 EAL domain THMIRHAS_08180 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_08180 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_08220 PF03050 Transposase IS66 family THMIRHAS_08220 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_08220 PF13007 Transposase C of IS166 homeodomain THMIRHAS_08220 PF13817 IS66 C-terminal element THMIRHAS_08270 PF03050 Transposase IS66 family THMIRHAS_08270 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_08270 PF13007 Transposase C of IS166 homeodomain THMIRHAS_08270 PF13817 IS66 C-terminal element THMIRHAS_08310 PF03050 Transposase IS66 family THMIRHAS_08310 PF13007 Transposase C of IS166 homeodomain THMIRHAS_08310 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_08310 PF13817 IS66 C-terminal element THMIRHAS_08320 PF05717 IS66 Orf2 like protein THMIRHAS_08350 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_08350 PF13817 IS66 C-terminal element THMIRHAS_08350 PF03050 Transposase IS66 family THMIRHAS_08350 PF13007 Transposase C of IS166 homeodomain THMIRHAS_08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_08370 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_08370 PF01627 Hpt domain THMIRHAS_08370 PF00672 HAMP domain THMIRHAS_08370 PF00072 Response regulator receiver domain THMIRHAS_08370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_08390 PF01695 IstB-like ATP binding protein THMIRHAS_08410 PF13808 DDE_Tnp_1-associated THMIRHAS_08410 PF01609 Transposase DDE domain THMIRHAS_08420 PF13808 DDE_Tnp_1-associated THMIRHAS_08420 PF01609 Transposase DDE domain THMIRHAS_08430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_08430 PF00672 HAMP domain THMIRHAS_08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_08430 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_08430 PF01627 Hpt domain THMIRHAS_08430 PF00072 Response regulator receiver domain THMIRHAS_08450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_08450 PF02203 Tar ligand binding domain homologue THMIRHAS_08450 PF00672 HAMP domain THMIRHAS_08460 PF00579 tRNA synthetases class I (W and Y) THMIRHAS_08470 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family THMIRHAS_08480 PF01743 Poly A polymerase head domain THMIRHAS_08480 PF12626 Polymerase A arginine-rich C-terminus THMIRHAS_08480 PF12627 Probable RNA and SrmB- binding site of polymerase A THMIRHAS_08490 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THMIRHAS_08500 PF02548 Ketopantoate hydroxymethyltransferase THMIRHAS_08510 PF02569 Pantoate-beta-alanine ligase THMIRHAS_08520 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_08530 PF00691 OmpA family THMIRHAS_08530 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAS_08540 PF02261 Aspartate decarboxylase THMIRHAS_08550 PF00311 Phosphoenolpyruvate carboxylase THMIRHAS_08560 PF00719 Inorganic pyrophosphatase THMIRHAS_08570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain THMIRHAS_08580 PF02926 THUMP domain THMIRHAS_08580 PF02568 Thiamine biosynthesis protein (ThiI) THMIRHAS_08590 PF01464 Transglycosylase SLT domain THMIRHAS_08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 THMIRHAS_08600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAS_08600 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_08610 PF17876 Cold shock domain THMIRHAS_08610 PF08206 Ribonuclease B OB domain THMIRHAS_08610 PF08461 Ribonuclease R winged-helix domain THMIRHAS_08610 PF00773 RNB domain THMIRHAS_08610 PF00575 S1 RNA binding domain THMIRHAS_08620 PF00588 SpoU rRNA Methylase family THMIRHAS_08620 PF08032 RNA 2'-O ribose methyltransferase substrate binding THMIRHAS_08630 PF01467 Cytidylyltransferase-like THMIRHAS_08630 PF00294 pfkB family carbohydrate kinase THMIRHAS_08640 PF13545 Crp-like helix-turn-helix domain THMIRHAS_08640 PF00027 Cyclic nucleotide-binding domain THMIRHAS_08650 PF00691 OmpA family THMIRHAS_08660 PF17432 Domain of unknown function (DUF3458_C) ARM repeats THMIRHAS_08660 PF11940 Domain of unknown function (DUF3458) Ig-like fold THMIRHAS_08660 PF01433 Peptidase family M1 domain THMIRHAS_08760 PF00072 Response regulator receiver domain THMIRHAS_08760 PF01584 CheW-like domain THMIRHAS_08780 PF00460 Flagella basal body rod protein THMIRHAS_08790 PF00460 Flagella basal body rod protein THMIRHAS_08790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAS_08800 PF03963 Flagellar hook capping protein - N-terminal region THMIRHAS_08810 PF07196 Flagellin hook IN motif THMIRHAS_08810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAS_08810 PF00460 Flagella basal body rod protein THMIRHAS_08810 PF07559 Flagellar basal body protein FlaE THMIRHAS_08820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAS_08820 PF00460 Flagella basal body rod protein THMIRHAS_08830 PF00460 Flagella basal body rod protein THMIRHAS_08830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMIRHAS_08840 PF02107 Flagellar L-ring protein THMIRHAS_08850 PF02119 Flagellar P-ring protein THMIRHAS_08860 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THMIRHAS_08860 PF10135 Rod binding protein THMIRHAS_08880 PF00669 Bacterial flagellin N-terminal helical region THMIRHAS_08890 PF01464 Transglycosylase SLT domain THMIRHAS_08890 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain THMIRHAS_08900 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_08910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMIRHAS_08930 PF03102 NeuB family THMIRHAS_08930 PF08666 SAF domain THMIRHAS_08940 PF02350 UDP-N-acetylglucosamine 2-epimerase THMIRHAS_08970 PF00483 Nucleotidyl transferase THMIRHAS_08980 PF02348 Cytidylyltransferase THMIRHAS_09000 PF00669 Bacterial flagellin N-terminal helical region THMIRHAS_09000 PF00700 Bacterial flagellin C-terminal helical region THMIRHAS_09010 PF00669 Bacterial flagellin N-terminal helical region THMIRHAS_09010 PF00700 Bacterial flagellin C-terminal helical region THMIRHAS_09040 PF07195 Flagellar hook-associated protein 2 C-terminus THMIRHAS_09040 PF02465 Flagellar hook-associated protein 2 N-terminus THMIRHAS_09050 PF02561 Flagellar protein FliS THMIRHAS_09070 PF00158 Sigma-54 interaction domain THMIRHAS_09070 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_09070 PF06490 Flagellar regulatory protein FleQ THMIRHAS_09080 PF00989 PAS fold THMIRHAS_09080 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_09090 PF00158 Sigma-54 interaction domain THMIRHAS_09090 PF00072 Response regulator receiver domain THMIRHAS_09090 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_09100 PF02049 Flagellar hook-basal body complex protein FliE THMIRHAS_09110 PF01514 Secretory protein of YscJ/FliF family THMIRHAS_09110 PF08345 Flagellar M-ring protein C-terminal THMIRHAS_09120 PF01706 FliG C-terminal domain THMIRHAS_09120 PF14841 FliG middle domain THMIRHAS_09120 PF14842 FliG N-terminal domain THMIRHAS_09140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_09140 PF18269 T3SS EscN ATPase C-terminal domain THMIRHAS_09170 PF00672 HAMP domain THMIRHAS_09170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_09180 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_09190 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAS_09190 PF00691 OmpA family THMIRHAS_09210 PF02154 Flagellar motor switch protein FliM THMIRHAS_09210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMIRHAS_09220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMIRHAS_09230 PF04347 Flagellar biosynthesis protein, FliO THMIRHAS_09240 PF00813 FliP family THMIRHAS_09250 PF01313 Bacterial export proteins, family 3 THMIRHAS_09260 PF01311 Bacterial export proteins, family 1 THMIRHAS_09270 PF01312 FlhB HrpN YscU SpaS Family THMIRHAS_09280 PF00771 FHIPEP family THMIRHAS_09290 PF00448 SRP54-type protein, GTPase domain THMIRHAS_09300 PF10609 NUBPL iron-transfer P-loop NTPase THMIRHAS_09310 PF04545 Sigma-70, region 4 THMIRHAS_09310 PF04539 Sigma-70 region 3 THMIRHAS_09310 PF04542 Sigma-70 region 2 THMIRHAS_09320 PF00072 Response regulator receiver domain THMIRHAS_09330 PF04344 Chemotaxis phosphatase, CheZ THMIRHAS_09340 PF00072 Response regulator receiver domain THMIRHAS_09340 PF01627 Hpt domain THMIRHAS_09340 PF01584 CheW-like domain THMIRHAS_09340 PF02895 Signal transducing histidine kinase, homodimeric domain THMIRHAS_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_09350 PF01584 CheW-like domain THMIRHAS_09360 PF01312 FlhB HrpN YscU SpaS Family THMIRHAS_09380 PF00072 Response regulator receiver domain THMIRHAS_09390 PF01584 CheW-like domain THMIRHAS_09410 PF01739 CheR methyltransferase, SAM binding domain THMIRHAS_09410 PF03705 CheR methyltransferase, all-alpha domain THMIRHAS_09420 PF00072 Response regulator receiver domain THMIRHAS_09420 PF01339 CheB methylesterase THMIRHAS_09430 PF17200 Single Cache domain 2 THMIRHAS_09430 PF00672 HAMP domain THMIRHAS_09430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_09450 PF01784 NIF3 (NGG1p interacting factor 3) THMIRHAS_09460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase THMIRHAS_09460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAS_09470 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_09480 PF17854 FtsK alpha domain THMIRHAS_09480 PF09397 Ftsk gamma domain THMIRHAS_09480 PF01580 FtsK/SpoIIIE family THMIRHAS_09480 PF13491 4TM region of DNA translocase FtsK/SpoIIIE THMIRHAS_09490 PF03548 Outer membrane lipoprotein carrier protein LolA THMIRHAS_09500 PF12002 MgsA AAA+ ATPase C terminal THMIRHAS_09500 PF16193 AAA C-terminal domain THMIRHAS_09500 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_09510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THMIRHAS_09520 PF02403 Seryl-tRNA synthetase N-terminal domain THMIRHAS_09520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAS_09540 PF00589 Phage integrase family THMIRHAS_09540 PF13356 Arm DNA-binding domain THMIRHAS_09570 PF00672 HAMP domain THMIRHAS_09570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_09570 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_09580 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_09580 PF00072 Response regulator receiver domain THMIRHAS_09610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_09610 PF08447 PAS fold THMIRHAS_09610 PF13426 PAS domain THMIRHAS_09620 PF00158 Sigma-54 interaction domain THMIRHAS_09620 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_09620 PF00072 Response regulator receiver domain THMIRHAS_09640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_09640 PF00672 HAMP domain THMIRHAS_09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_09640 PF01627 Hpt domain THMIRHAS_09640 PF00072 Response regulator receiver domain THMIRHAS_09640 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_09650 PF00072 Response regulator receiver domain THMIRHAS_09650 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_09660 PF04317 YcjX-like family, DUF463 THMIRHAS_09680 PF00593 TonB dependent receptor THMIRHAS_09680 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_09730 PF00005 ABC transporter THMIRHAS_09740 PF00578 AhpC/TSA family THMIRHAS_09790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THMIRHAS_09790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THMIRHAS_09800 PF00664 ABC transporter transmembrane region THMIRHAS_09800 PF00005 ABC transporter THMIRHAS_09810 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_09810 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_09810 PF00563 EAL domain THMIRHAS_09820 PF00196 Bacterial regulatory proteins, luxR family THMIRHAS_09820 PF00072 Response regulator receiver domain THMIRHAS_09830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAS_09830 PF00529 HlyD membrane-fusion protein of T1SS THMIRHAS_09840 PF00664 ABC transporter transmembrane region THMIRHAS_09840 PF00005 ABC transporter THMIRHAS_09840 PF03412 Peptidase C39 family THMIRHAS_09850 PF05736 OprF membrane domain THMIRHAS_09850 PF00691 OmpA family THMIRHAS_09870 PF13817 IS66 C-terminal element THMIRHAS_09870 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_09870 PF03050 Transposase IS66 family THMIRHAS_09870 PF13007 Transposase C of IS166 homeodomain THMIRHAS_09920 PF13007 Transposase C of IS166 homeodomain THMIRHAS_09920 PF13817 IS66 C-terminal element THMIRHAS_09920 PF03050 Transposase IS66 family THMIRHAS_09920 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_09940 PF03050 Transposase IS66 family THMIRHAS_09940 PF13817 IS66 C-terminal element THMIRHAS_09940 PF13007 Transposase C of IS166 homeodomain THMIRHAS_09940 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_09970 PF03050 Transposase IS66 family THMIRHAS_09970 PF13007 Transposase C of IS166 homeodomain THMIRHAS_09970 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_09970 PF13817 IS66 C-terminal element THMIRHAS_10000 PF03050 Transposase IS66 family THMIRHAS_10000 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10000 PF13817 IS66 C-terminal element THMIRHAS_10000 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10030 PF05717 IS66 Orf2 like protein THMIRHAS_10040 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10040 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10040 PF13817 IS66 C-terminal element THMIRHAS_10040 PF03050 Transposase IS66 family THMIRHAS_10080 PF13817 IS66 C-terminal element THMIRHAS_10080 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10080 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10080 PF03050 Transposase IS66 family THMIRHAS_10090 PF05717 IS66 Orf2 like protein THMIRHAS_10120 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10120 PF13817 IS66 C-terminal element THMIRHAS_10120 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10120 PF03050 Transposase IS66 family THMIRHAS_10140 PF03050 Transposase IS66 family THMIRHAS_10140 PF13817 IS66 C-terminal element THMIRHAS_10140 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10140 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10190 PF00365 Phosphofructokinase THMIRHAS_10200 PF00570 HRDC domain THMIRHAS_10200 PF01612 3'-5' exonuclease THMIRHAS_10210 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_10210 PF01225 Mur ligase family, catalytic domain THMIRHAS_10210 PF08245 Mur ligase middle domain THMIRHAS_10250 PF13007 Transposase C of IS166 homeodomain THMIRHAS_10250 PF13817 IS66 C-terminal element THMIRHAS_10250 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_10250 PF03050 Transposase IS66 family THMIRHAS_10270 PF04315 Elongation factor P hydroxylase THMIRHAS_10300 PF04408 Helicase associated domain (HA2) THMIRHAS_10300 PF00271 Helicase conserved C-terminal domain THMIRHAS_10300 PF00270 DEAD/DEAH box helicase THMIRHAS_10300 PF08482 ATP-dependent helicase C-terminal THMIRHAS_10310 PF00313 'Cold-shock' DNA-binding domain THMIRHAS_10320 PF00202 Aminotransferase class-III THMIRHAS_10330 PF02581 Thiamine monophosphate synthase THMIRHAS_10340 PF00578 AhpC/TSA family THMIRHAS_10350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) THMIRHAS_10380 PF02630 SCO1/SenC THMIRHAS_10390 PF00585 C-terminal regulatory domain of Threonine dehydratase THMIRHAS_10390 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAS_10410 PF13286 Phosphohydrolase-associated domain THMIRHAS_10410 PF01966 HD domain THMIRHAS_10420 PF08331 Domain of unknown function (DUF1730) THMIRHAS_10430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THMIRHAS_10440 PF11741 AMIN domain THMIRHAS_10440 PF01520 N-acetylmuramoyl-L-alanine amidase THMIRHAS_10450 PF01812 5-formyltetrahydrofolate cyclo-ligase family THMIRHAS_10480 PF00557 Metallopeptidase family M24 THMIRHAS_10480 PF05195 Aminopeptidase P, N-terminal domain THMIRHAS_10490 PF01494 FAD binding domain THMIRHAS_10500 PF01494 FAD binding domain THMIRHAS_10510 PF07885 Ion channel THMIRHAS_10520 PF03466 LysR substrate binding domain THMIRHAS_10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_10530 PF02562 PhoH-like protein THMIRHAS_10530 PF13638 PIN domain THMIRHAS_10550 PF00578 AhpC/TSA family THMIRHAS_10560 PF00701 Dihydrodipicolinate synthetase family THMIRHAS_10610 PF00149 Calcineurin-like phosphoesterase THMIRHAS_10630 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_10640 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_10650 PF08402 TOBE domain THMIRHAS_10650 PF00005 ABC transporter THMIRHAS_10660 PF13416 Bacterial extracellular solute-binding protein THMIRHAS_10670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMIRHAS_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_10670 PF13247 4Fe-4S dicluster domain THMIRHAS_10700 PF12848 ABC transporter THMIRHAS_10700 PF00005 ABC transporter THMIRHAS_10710 PF00464 Serine hydroxymethyltransferase THMIRHAS_10720 PF03477 ATP cone domain THMIRHAS_10730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMIRHAS_10730 PF01872 RibD C-terminal domain THMIRHAS_10740 PF00677 Lumazine binding domain THMIRHAS_10750 PF00925 GTP cyclohydrolase II THMIRHAS_10750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THMIRHAS_10760 PF00885 6,7-dimethyl-8-ribityllumazine synthase THMIRHAS_10770 PF01029 NusB family THMIRHAS_10780 PF00586 AIR synthase related protein, N-terminal domain THMIRHAS_10780 PF02769 AIR synthase related protein, C-terminal domain THMIRHAS_10790 PF00793 DAHP synthetase I family THMIRHAS_10810 PF01478 Type IV leader peptidase family THMIRHAS_10810 PF06750 Bacterial Peptidase A24 N-terminal domain THMIRHAS_10830 PF01242 6-pyruvoyl tetrahydropterin synthase THMIRHAS_10840 PF00348 Polyprenyl synthetase THMIRHAS_10870 PF00152 tRNA synthetases class II (D, K and N) THMIRHAS_10870 PF01336 OB-fold nucleic acid binding domain THMIRHAS_10870 PF02938 GAD domain THMIRHAS_10880 PF02445 Quinolinate synthetase A protein THMIRHAS_10890 PF02075 Crossover junction endodeoxyribonuclease RuvC THMIRHAS_10900 PF07499 RuvA, C-terminal domain THMIRHAS_10900 PF01330 RuvA N terminal domain THMIRHAS_10910 PF05496 Holliday junction DNA helicase RuvB P-loop domain THMIRHAS_10910 PF17864 RuvB AAA lid domain THMIRHAS_10910 PF05491 RuvB C-terminal winged helix domain THMIRHAS_10920 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_10930 PF02472 Biopolymer transport protein ExbD/TolR THMIRHAS_10950 PF04052 TolB amino-terminal domain THMIRHAS_10950 PF07676 WD40-like Beta Propeller Repeat THMIRHAS_10960 PF00691 OmpA family THMIRHAS_10980 PF06508 Queuosine biosynthesis protein QueC THMIRHAS_11010 PF00989 PAS fold THMIRHAS_11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_11010 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_11020 PF00072 Response regulator receiver domain THMIRHAS_11020 PF00158 Sigma-54 interaction domain THMIRHAS_11020 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_11040 PF09335 SNARE associated Golgi protein THMIRHAS_11050 PF00543 Nitrogen regulatory protein P-II THMIRHAS_11060 PF02666 Phosphatidylserine decarboxylase THMIRHAS_11070 PF00764 Arginosuccinate synthase THMIRHAS_11080 PF00313 'Cold-shock' DNA-binding domain THMIRHAS_11100 PF04608 Phosphatidylglycerophosphatase A THMIRHAS_11120 PF00375 Sodium:dicarboxylate symporter family THMIRHAS_11130 PF12850 Calcineurin-like phosphoesterase superfamily domain THMIRHAS_11140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THMIRHAS_11150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THMIRHAS_11160 PF01406 tRNA synthetases class I (C) catalytic domain THMIRHAS_11160 PF09190 DALR domain THMIRHAS_11170 PF01464 Transglycosylase SLT domain THMIRHAS_11170 PF14718 Soluble lytic murein transglycosylase L domain THMIRHAS_11180 PF01464 Transglycosylase SLT domain THMIRHAS_11180 PF01476 LysM domain THMIRHAS_11190 PF16123 Hydroxyacylglutathione hydrolase C-terminus THMIRHAS_11190 PF00753 Metallo-beta-lactamase superfamily THMIRHAS_11200 PF08241 Methyltransferase domain THMIRHAS_11210 PF00075 RNase H THMIRHAS_11220 PF00929 Exonuclease THMIRHAS_11230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAS_11240 PF04273 Putative phosphatase (DUF442) THMIRHAS_11240 PF00753 Metallo-beta-lactamase superfamily THMIRHAS_11250 PF04408 Helicase associated domain (HA2) THMIRHAS_11250 PF11898 Domain of unknown function (DUF3418) THMIRHAS_11250 PF00270 DEAD/DEAH box helicase THMIRHAS_11250 PF00271 Helicase conserved C-terminal domain THMIRHAS_11250 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold THMIRHAS_11260 PF00034 Cytochrome c THMIRHAS_11320 PF00549 CoA-ligase THMIRHAS_11320 PF08442 ATP-grasp domain THMIRHAS_11330 PF00549 CoA-ligase THMIRHAS_11330 PF02629 CoA binding domain THMIRHAS_11340 PF02540 NAD synthase THMIRHAS_11340 PF00795 Carbon-nitrogen hydrolase THMIRHAS_11350 PF13525 Outer membrane lipoprotein THMIRHAS_11360 PF00849 RNA pseudouridylate synthase THMIRHAS_11360 PF01479 S4 domain THMIRHAS_11380 PF02080 TrkA-C domain THMIRHAS_11380 PF00999 Sodium/hydrogen exchanger family THMIRHAS_11380 PF02254 TrkA-N domain THMIRHAS_11390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THMIRHAS_11390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THMIRHAS_11400 PF01510 N-acetylmuramoyl-L-alanine amidase THMIRHAS_11420 PF00258 Flavodoxin THMIRHAS_11440 PF00293 NUDIX domain THMIRHAS_11450 PF00456 Transketolase, thiamine diphosphate binding domain THMIRHAS_11450 PF17831 Pyruvate dehydrogenase E1 component middle domain THMIRHAS_11460 PF02817 e3 binding domain THMIRHAS_11460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THMIRHAS_11460 PF00364 Biotin-requiring enzyme THMIRHAS_11470 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_11470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMIRHAS_11510 PF12843 Putative quorum-sensing-regulated virulence factor THMIRHAS_11520 PF01262 Alanine dehydrogenase/PNT, C-terminal domain THMIRHAS_11520 PF05222 Alanine dehydrogenase/PNT, N-terminal domain THMIRHAS_11550 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THMIRHAS_11560 PF08668 HDOD domain THMIRHAS_11560 PF00563 EAL domain THMIRHAS_11570 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_11570 PF00072 Response regulator receiver domain THMIRHAS_11580 PF12697 Alpha/beta hydrolase family THMIRHAS_11600 PF08207 Elongation factor P (EF-P) KOW-like domain THMIRHAS_11600 PF01132 Elongation factor P (EF-P) OB domain THMIRHAS_11600 PF09285 Elongation factor P, C-terminal THMIRHAS_11610 PF00270 DEAD/DEAH box helicase THMIRHAS_11610 PF00271 Helicase conserved C-terminal domain THMIRHAS_11630 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) THMIRHAS_11650 PF00271 Helicase conserved C-terminal domain THMIRHAS_11650 PF00270 DEAD/DEAH box helicase THMIRHAS_11660 PF00005 ABC transporter THMIRHAS_11660 PF12848 ABC transporter THMIRHAS_11670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 THMIRHAS_11680 PF00881 Nitroreductase family THMIRHAS_11700 PF13614 AAA domain THMIRHAS_11730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase THMIRHAS_11730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAS_11740 PF00563 EAL domain THMIRHAS_11740 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_11740 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_11760 PF04247 Invasion gene expression up-regulator, SirB THMIRHAS_11800 PF00849 RNA pseudouridylate synthase THMIRHAS_11810 PF03692 Putative zinc- or iron-chelating domain THMIRHAS_11830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAS_11890 PF00919 Uncharacterized protein family UPF0004 THMIRHAS_11890 PF18693 TRAM domain THMIRHAS_11890 PF04055 Radical SAM superfamily THMIRHAS_11900 PF00881 Nitroreductase family THMIRHAS_11940 PF12838 4Fe-4S dicluster domain THMIRHAS_11990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_11990 PF02203 Tar ligand binding domain homologue THMIRHAS_11990 PF00672 HAMP domain THMIRHAS_12010 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAS_12020 PF01928 CYTH domain THMIRHAS_12050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMIRHAS_12070 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_12100 PF00933 Glycosyl hydrolase family 3 N terminal domain THMIRHAS_12110 PF00924 Mechanosensitive ion channel THMIRHAS_12120 PF01852 START domain THMIRHAS_12130 PF01565 FAD binding domain THMIRHAS_12130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THMIRHAS_12140 PF00209 Sodium:neurotransmitter symporter family THMIRHAS_12190 PF01964 Radical SAM ThiC family THMIRHAS_12190 PF13667 ThiC-associated domain THMIRHAS_12200 PF01266 FAD dependent oxidoreductase THMIRHAS_12220 PF05690 Thiazole biosynthesis protein ThiG THMIRHAS_12230 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_12230 PF00072 Response regulator receiver domain THMIRHAS_12240 PF08448 PAS fold THMIRHAS_12240 PF03705 CheR methyltransferase, all-alpha domain THMIRHAS_12240 PF01739 CheR methyltransferase, SAM binding domain THMIRHAS_12240 PF01339 CheB methylesterase THMIRHAS_12270 PF03461 TRCF domain THMIRHAS_12270 PF17757 UvrB interaction domain THMIRHAS_12270 PF00270 DEAD/DEAH box helicase THMIRHAS_12270 PF02559 CarD-like/TRCF domain THMIRHAS_12270 PF00271 Helicase conserved C-terminal domain THMIRHAS_12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_12310 PF03458 UPF0126 domain THMIRHAS_12320 PF02687 FtsX-like permease family THMIRHAS_12320 PF12704 MacB-like periplasmic core domain THMIRHAS_12330 PF00005 ABC transporter THMIRHAS_12340 PF00005 ABC transporter THMIRHAS_12340 PF12848 ABC transporter THMIRHAS_12350 PF01343 Peptidase family S49 THMIRHAS_12360 PF01541 GIY-YIG catalytic domain THMIRHAS_12360 PF12826 Helix-hairpin-helix motif THMIRHAS_12360 PF02151 UvrB/uvrC motif THMIRHAS_12360 PF08459 UvrC Helix-hairpin-helix N-terminal THMIRHAS_12370 PF01066 CDP-alcohol phosphatidyltransferase THMIRHAS_12570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_12570 PF08447 PAS fold THMIRHAS_12570 PF13426 PAS domain THMIRHAS_12590 PF07687 Peptidase dimerisation domain THMIRHAS_12590 PF01546 Peptidase family M20/M25/M40 THMIRHAS_12600 PF03960 ArsC family THMIRHAS_12610 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle THMIRHAS_12610 PF14602 Hexapeptide repeat of succinyl-transferase THMIRHAS_12630 PF01909 Nucleotidyltransferase domain THMIRHAS_12630 PF08335 GlnD PII-uridylyltransferase THMIRHAS_12630 PF01966 HD domain THMIRHAS_12640 PF00557 Metallopeptidase family M24 THMIRHAS_12650 PF00318 Ribosomal protein S2 THMIRHAS_12660 PF00889 Elongation factor TS THMIRHAS_12670 PF00696 Amino acid kinase family THMIRHAS_12680 PF01765 Ribosome recycling factor THMIRHAS_12690 PF01255 Putative undecaprenyl diphosphate synthase THMIRHAS_12710 PF13180 PDZ domain THMIRHAS_12710 PF17820 PDZ domain THMIRHAS_12710 PF02163 Peptidase family M50 THMIRHAS_12720 PF01103 Surface antigen THMIRHAS_12720 PF07244 Surface antigen variable number repeat THMIRHAS_12740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THMIRHAS_12740 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_12750 PF07977 FabA-like domain THMIRHAS_12760 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_12760 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THMIRHAS_12770 PF02684 Lipid-A-disaccharide synthetase THMIRHAS_12780 PF01351 Ribonuclease HII THMIRHAS_12790 PF01584 CheW-like domain THMIRHAS_12790 PF00072 Response regulator receiver domain THMIRHAS_12830 PF06733 DEAD_2 THMIRHAS_12830 PF13307 Helicase C-terminal domain THMIRHAS_12840 PF00814 Glycoprotease family THMIRHAS_12880 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding THMIRHAS_12880 PF18381 YcaO cyclodehydratase C-terminal domain THMIRHAS_12900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit THMIRHAS_12910 PF11734 TilS substrate C-terminal domain THMIRHAS_12910 PF01171 PP-loop family THMIRHAS_12920 PF06418 CTP synthase N-terminus THMIRHAS_12920 PF00117 Glutamine amidotransferase class-I THMIRHAS_12930 PF00793 DAHP synthetase I family THMIRHAS_12940 PF00113 Enolase, C-terminal TIM barrel domain THMIRHAS_12940 PF03952 Enolase, N-terminal domain THMIRHAS_12950 PF04977 Septum formation initiator THMIRHAS_12970 PF01975 Survival protein SurE THMIRHAS_12990 PF09335 SNARE associated Golgi protein THMIRHAS_13000 PF01476 LysM domain THMIRHAS_13000 PF01551 Peptidase family M23 THMIRHAS_13010 PF04430 Protein of unknown function (DUF498/DUF598) THMIRHAS_13020 PF00155 Aminotransferase class I and II THMIRHAS_13030 PF03447 Homoserine dehydrogenase, NAD binding domain THMIRHAS_13030 PF00742 Homoserine dehydrogenase THMIRHAS_13030 PF01842 ACT domain THMIRHAS_13050 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAS_13110 PF01258 Prokaryotic dksA/traR C4-type zinc finger THMIRHAS_13120 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAS_13140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMIRHAS_13160 PF00533 BRCA1 C Terminus (BRCT) domain THMIRHAS_13160 PF01653 NAD-dependent DNA ligase adenylation domain THMIRHAS_13160 PF03120 NAD-dependent DNA ligase OB-fold domain THMIRHAS_13160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THMIRHAS_13160 PF12826 Helix-hairpin-helix motif THMIRHAS_13170 PF04751 Protein of unknown function (DUF615) THMIRHAS_13200 PF01726 LexA DNA binding domain THMIRHAS_13200 PF00717 Peptidase S24-like THMIRHAS_13210 PF03795 YCII-related domain THMIRHAS_13220 PF04279 Intracellular septation protein A THMIRHAS_13230 PF02811 PHP domain THMIRHAS_13240 PF01300 Telomere recombination THMIRHAS_13250 PF02163 Peptidase family M50 THMIRHAS_13260 PF01479 S4 domain THMIRHAS_13260 PF00849 RNA pseudouridylate synthase THMIRHAS_13270 PF04963 Sigma-54 factor, core binding domain THMIRHAS_13270 PF04552 Sigma-54, DNA binding domain THMIRHAS_13270 PF00309 Sigma-54 factor, Activator interacting domain (AID) THMIRHAS_13310 PF03960 ArsC family THMIRHAS_13330 PF13742 OB-fold nucleic acid binding domain THMIRHAS_13330 PF02601 Exonuclease VII, large subunit THMIRHAS_13340 PF01207 Dihydrouridine synthase (Dus) THMIRHAS_13350 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_13350 PF17158 Membrane-associated sensor, integral membrane domain THMIRHAS_13370 PF02824 TGS domain THMIRHAS_13370 PF13291 ACT domain THMIRHAS_13370 PF04607 Region found in RelA / SpoT proteins THMIRHAS_13380 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMIRHAS_13440 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_13440 PF00072 Response regulator receiver domain THMIRHAS_13450 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_13450 PF00672 HAMP domain THMIRHAS_13480 PF01554 MatE THMIRHAS_13500 PF00293 NUDIX domain THMIRHAS_13510 PF01168 Alanine racemase, N-terminal domain THMIRHAS_13510 PF00842 Alanine racemase, C-terminal domain THMIRHAS_13520 PF00772 DnaB-like helicase N terminal domain THMIRHAS_13520 PF03796 DnaB-like helicase C terminal domain THMIRHAS_13530 PF01281 Ribosomal protein L9, N-terminal domain THMIRHAS_13530 PF03948 Ribosomal protein L9, C-terminal domain THMIRHAS_13550 PF01084 Ribosomal protein S18 THMIRHAS_13560 PF01250 Ribosomal protein S6 THMIRHAS_13570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THMIRHAS_13590 PF00216 Bacterial DNA-binding protein THMIRHAS_13600 PF00575 S1 RNA binding domain THMIRHAS_13610 PF02224 Cytidylate kinase THMIRHAS_13620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMIRHAS_13630 PF01842 ACT domain THMIRHAS_13630 PF02153 Prephenate dehydrogenase THMIRHAS_13640 PF00155 Aminotransferase class I and II THMIRHAS_13650 PF01842 ACT domain THMIRHAS_13650 PF01817 Chorismate mutase type II THMIRHAS_13650 PF00800 Prephenate dehydratase THMIRHAS_13660 PF00266 Aminotransferase class-V THMIRHAS_13670 PF00521 DNA gyrase/topoisomerase IV, subunit A THMIRHAS_13670 PF03989 DNA gyrase C-terminal domain, beta-propeller THMIRHAS_13690 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAS_13710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMIRHAS_13710 PF00005 ABC transporter THMIRHAS_13720 PF12911 N-terminal TM domain of oligopeptide transport permease C THMIRHAS_13720 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_13730 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_13740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMIRHAS_13760 PF00216 Bacterial DNA-binding protein THMIRHAS_13770 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_13770 PF02190 ATP-dependent protease La (LON) substrate-binding domain THMIRHAS_13770 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAS_13780 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAS_13780 PF07724 AAA domain (Cdc48 subfamily) THMIRHAS_13780 PF06689 ClpX C4-type zinc finger THMIRHAS_13790 PF00574 Clp protease THMIRHAS_13800 PF05698 Bacterial trigger factor protein (TF) C-terminus THMIRHAS_13800 PF05697 Bacterial trigger factor protein (TF) THMIRHAS_13800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THMIRHAS_13810 PF00581 Rhodanese-like domain THMIRHAS_13810 PF11127 Protein of unknown function (DUF2892) THMIRHAS_13860 PF06434 Aconitate hydratase 2 N-terminus THMIRHAS_13860 PF00330 Aconitase family (aconitate hydratase) THMIRHAS_13860 PF11791 Aconitate B N-terminal domain THMIRHAS_13880 PF08328 Adenylosuccinate lyase C-terminal THMIRHAS_13880 PF00206 Lyase THMIRHAS_13900 PF00005 ABC transporter THMIRHAS_13920 PF08007 Cupin superfamily protein THMIRHAS_13930 PF00085 Thioredoxin THMIRHAS_13940 PF05193 Peptidase M16 inactive domain THMIRHAS_13940 PF00675 Insulinase (Peptidase family M16) THMIRHAS_13940 PF08367 Peptidase M16C associated THMIRHAS_13950 PF01138 3' exoribonuclease family, domain 1 THMIRHAS_13950 PF03725 3' exoribonuclease family, domain 2 THMIRHAS_13950 PF00575 S1 RNA binding domain THMIRHAS_13950 PF00013 KH domain THMIRHAS_13950 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THMIRHAS_13960 PF00312 Ribosomal protein S15 THMIRHAS_13980 PF03848 Tellurite resistance protein TehB THMIRHAS_13990 PF01509 TruB family pseudouridylate synthase (N terminal domain) THMIRHAS_13990 PF16198 tRNA pseudouridylate synthase B C-terminal domain THMIRHAS_13990 PF09157 Pseudouridine synthase II TruB, C-terminal THMIRHAS_14000 PF02033 Ribosome-binding factor A THMIRHAS_14010 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_14010 PF04760 Translation initiation factor IF-2, N-terminal region THMIRHAS_14010 PF08364 Bacterial translation initiation factor IF-2 associated region THMIRHAS_14010 PF11987 Translation-initiation factor 2 THMIRHAS_14020 PF08529 NusA N-terminal domain THMIRHAS_14020 PF00575 S1 RNA binding domain THMIRHAS_14020 PF13184 NusA-like KH domain THMIRHAS_14030 PF02576 RimP N-terminal domain THMIRHAS_14030 PF17384 RimP C-terminal SH3 domain THMIRHAS_14040 PF14480 DNA polymerase III polC-type N-terminus I THMIRHAS_14040 PF11490 DNA polymerase III polC-type N-terminus II THMIRHAS_14040 PF00929 Exonuclease THMIRHAS_14040 PF02811 PHP domain THMIRHAS_14040 PF14579 Helix-hairpin-helix motif THMIRHAS_14040 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMIRHAS_14040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMIRHAS_14060 PF00474 Sodium:solute symporter family THMIRHAS_14080 PF13193 AMP-binding enzyme C-terminal domain THMIRHAS_14080 PF00501 AMP-binding enzyme THMIRHAS_14080 PF16177 Acetyl-coenzyme A synthetase N-terminus THMIRHAS_14090 PF01336 OB-fold nucleic acid binding domain THMIRHAS_14090 PF02811 PHP domain THMIRHAS_14090 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMIRHAS_14090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMIRHAS_14090 PF14579 Helix-hairpin-helix motif THMIRHAS_14100 PF03588 Leucyl/phenylalanyl-tRNA protein transferase THMIRHAS_14110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit THMIRHAS_14130 PF00890 FAD binding domain THMIRHAS_14130 PF02910 Fumarate reductase flavoprotein C-term THMIRHAS_14140 PF13085 2Fe-2S iron-sulfur cluster binding domain THMIRHAS_14160 PF01176 Translation initiation factor 1A / IF-1 THMIRHAS_14180 PF02861 Clp amino terminal domain, pathogenicity island component THMIRHAS_14180 PF17871 AAA lid domain THMIRHAS_14180 PF07724 AAA domain (Cdc48 subfamily) THMIRHAS_14180 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAS_14180 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_14190 PF02617 ATP-dependent Clp protease adaptor protein ClpS THMIRHAS_14200 PF00226 DnaJ domain THMIRHAS_14200 PF01556 DnaJ C terminal domain THMIRHAS_14210 PF08274 PhnA Zinc-Ribbon THMIRHAS_14210 PF03831 PhnA domain THMIRHAS_14220 PF01709 Transcriptional regulator THMIRHAS_14250 PF03971 Monomeric isocitrate dehydrogenase THMIRHAS_14260 PF00849 RNA pseudouridylate synthase THMIRHAS_14280 PF04356 Protein of unknown function (DUF489) THMIRHAS_14300 PF13145 PPIC-type PPIASE domain THMIRHAS_14320 PF00072 Response regulator receiver domain THMIRHAS_14350 PF13007 Transposase C of IS166 homeodomain THMIRHAS_14350 PF13817 IS66 C-terminal element THMIRHAS_14350 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_14350 PF03050 Transposase IS66 family THMIRHAS_14360 PF00709 Adenylosuccinate synthetase THMIRHAS_14370 PF13393 Histidyl-tRNA synthetase THMIRHAS_14380 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) THMIRHAS_14390 PF01145 SPFH domain / Band 7 family THMIRHAS_14400 PF01145 SPFH domain / Band 7 family THMIRHAS_14410 PF01926 50S ribosome-binding GTPase THMIRHAS_14410 PF16360 GTP-binding GTPase Middle Region THMIRHAS_14410 PF13167 GTP-binding GTPase N-terminal THMIRHAS_14420 PF17209 Hfq protein THMIRHAS_14440 PF01119 DNA mismatch repair protein, C-terminal domain THMIRHAS_14440 PF08676 MutL C terminal dimerisation domain THMIRHAS_14450 PF10609 NUBPL iron-transfer P-loop NTPase THMIRHAS_14460 PF01588 Putative tRNA binding domain THMIRHAS_14460 PF09334 tRNA synthetases class I (M) THMIRHAS_14470 PF02508 Rnf-Nqr subunit, membrane protein THMIRHAS_14480 PF04060 Putative Fe-S cluster THMIRHAS_14490 PF12838 4Fe-4S dicluster domain THMIRHAS_14490 PF13375 RnfC Barrel sandwich hybrid domain THMIRHAS_14490 PF10531 SLBB domain THMIRHAS_14490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMIRHAS_14500 PF03116 NQR2, RnfD, RnfE family THMIRHAS_14510 PF04205 FMN-binding domain THMIRHAS_14520 PF02508 Rnf-Nqr subunit, membrane protein THMIRHAS_14540 PF10576 Iron-sulfur binding domain of endonuclease III THMIRHAS_14540 PF00633 Helix-hairpin-helix motif THMIRHAS_14540 PF00730 HhH-GPD superfamily base excision DNA repair protein THMIRHAS_14570 PF01810 LysE type translocator THMIRHAS_14590 PF00578 AhpC/TSA family THMIRHAS_14610 PF00117 Glutamine amidotransferase class-I THMIRHAS_14610 PF00958 GMP synthase C terminal domain THMIRHAS_14610 PF02540 NAD synthase THMIRHAS_14620 PF00665 Integrase core domain THMIRHAS_14620 PF13276 HTH-like domain THMIRHAS_14620 PF13333 Integrase core domain THMIRHAS_14640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain THMIRHAS_14640 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMIRHAS_14660 PF00593 TonB dependent receptor THMIRHAS_14660 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_14670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAS_14670 PF07685 CobB/CobQ-like glutamine amidotransferase domain THMIRHAS_14700 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) THMIRHAS_14710 PF00361 Proton-conducting membrane transporter THMIRHAS_14710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMIRHAS_14710 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus THMIRHAS_14720 PF12795 Mechanosensitive ion channel porin domain THMIRHAS_14720 PF00924 Mechanosensitive ion channel THMIRHAS_14720 PF12794 Mechanosensitive ion channel inner membrane domain 1 THMIRHAS_14730 PF12557 Cob(I)alamin adenosyltransferase N terminal THMIRHAS_14730 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THMIRHAS_14740 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAS_14740 PF07685 CobB/CobQ-like glutamine amidotransferase domain THMIRHAS_14740 PF00155 Aminotransferase class I and II THMIRHAS_14750 PF03186 CobD/Cbib protein THMIRHAS_14760 PF01497 Periplasmic binding protein THMIRHAS_14770 PF12823 Domain of unknown function (DUF3817) THMIRHAS_14790 PF02348 Cytidylyltransferase THMIRHAS_14800 PF03966 Trm112p-like protein THMIRHAS_14810 PF02606 Tetraacyldisaccharide-1-P 4'-kinase THMIRHAS_14820 PF13567 Domain of unknown function (DUF4131) THMIRHAS_14820 PF03772 Competence protein THMIRHAS_14820 PF00753 Metallo-beta-lactamase superfamily THMIRHAS_14840 PF13654 AAA domain THMIRHAS_14840 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAS_14850 PF00909 Ammonium Transporter Family THMIRHAS_14870 PF02654 Cobalamin-5-phosphate synthase THMIRHAS_14890 PF02277 Phosphoribosyltransferase THMIRHAS_14900 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase THMIRHAS_14930 PF03449 Transcription elongation factor, N-terminal THMIRHAS_14930 PF01272 Transcription elongation factor, GreA/GreB, C-term THMIRHAS_14950 PF01758 Sodium Bile acid symporter family THMIRHAS_14960 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_14960 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_14960 PF00563 EAL domain THMIRHAS_14980 PF01648 4'-phosphopantetheinyl transferase superfamily THMIRHAS_14990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ THMIRHAS_15000 PF11967 Recombination protein O N terminal THMIRHAS_15000 PF02565 Recombination protein O C terminal THMIRHAS_15010 PF07650 KH domain THMIRHAS_15010 PF01926 50S ribosome-binding GTPase THMIRHAS_15020 PF14622 Ribonuclease-III-like THMIRHAS_15020 PF00035 Double-stranded RNA binding motif THMIRHAS_15030 PF10502 Signal peptidase, peptidase S26 THMIRHAS_15040 PF00679 Elongation factor G C-terminus THMIRHAS_15040 PF03144 Elongation factor Tu domain 2 THMIRHAS_15040 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_15040 PF06421 GTP-binding protein LepA C-terminus THMIRHAS_15050 PF13180 PDZ domain THMIRHAS_15070 PF02910 Fumarate reductase flavoprotein C-term THMIRHAS_15070 PF00890 FAD binding domain THMIRHAS_15080 PF01584 CheW-like domain THMIRHAS_15100 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_15100 PF13188 PAS domain THMIRHAS_15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_15100 PF00072 Response regulator receiver domain THMIRHAS_15100 PF08448 PAS fold THMIRHAS_15110 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_15130 PF00535 Glycosyl transferase family 2 THMIRHAS_15170 PF03050 Transposase IS66 family THMIRHAS_15170 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_15170 PF13817 IS66 C-terminal element THMIRHAS_15170 PF13007 Transposase C of IS166 homeodomain THMIRHAS_15240 PF03050 Transposase IS66 family THMIRHAS_15240 PF13817 IS66 C-terminal element THMIRHAS_15240 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_15240 PF13007 Transposase C of IS166 homeodomain THMIRHAS_15300 PF00535 Glycosyl transferase family 2 THMIRHAS_15330 PF16363 GDP-mannose 4,6 dehydratase THMIRHAS_15340 PF04321 RmlD substrate binding domain THMIRHAS_15360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase THMIRHAS_15370 PF00483 Nucleotidyl transferase THMIRHAS_15380 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_15380 PF03050 Transposase IS66 family THMIRHAS_15380 PF13817 IS66 C-terminal element THMIRHAS_15380 PF13007 Transposase C of IS166 homeodomain THMIRHAS_15400 PF13276 HTH-like domain THMIRHAS_15400 PF13333 Integrase core domain THMIRHAS_15400 PF00665 Integrase core domain THMIRHAS_15410 PF13007 Transposase C of IS166 homeodomain THMIRHAS_15410 PF03050 Transposase IS66 family THMIRHAS_15410 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_15410 PF13817 IS66 C-terminal element THMIRHAS_15420 PF13817 IS66 C-terminal element THMIRHAS_15420 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_15420 PF13007 Transposase C of IS166 homeodomain THMIRHAS_15420 PF03050 Transposase IS66 family THMIRHAS_15460 PF00005 ABC transporter THMIRHAS_15470 PF01061 ABC-2 type transporter THMIRHAS_15480 PF10531 SLBB domain THMIRHAS_15480 PF02563 Polysaccharide biosynthesis/export protein THMIRHAS_15500 PF05159 Capsule polysaccharide biosynthesis protein THMIRHAS_15510 PF05159 Capsule polysaccharide biosynthesis protein THMIRHAS_15530 PF00667 FAD binding domain THMIRHAS_15530 PF00175 Oxidoreductase NAD-binding domain THMIRHAS_15530 PF00067 Cytochrome P450 THMIRHAS_15530 PF00258 Flavodoxin THMIRHAS_15550 PF00152 tRNA synthetases class II (D, K and N) THMIRHAS_15550 PF01336 OB-fold nucleic acid binding domain THMIRHAS_15560 PF00472 RF-1 domain THMIRHAS_15560 PF03462 PCRF domain THMIRHAS_15580 PF00072 Response regulator receiver domain THMIRHAS_15580 PF00196 Bacterial regulatory proteins, luxR family THMIRHAS_15590 PF10415 Fumarase C C-terminus THMIRHAS_15590 PF00206 Lyase THMIRHAS_15600 PF00085 Thioredoxin THMIRHAS_15610 PF00106 short chain dehydrogenase THMIRHAS_15620 PF12804 MobA-like NTP transferase domain THMIRHAS_15630 PF03453 MoeA N-terminal region (domain I and II) THMIRHAS_15630 PF03454 MoeA C-terminal region (domain IV) THMIRHAS_15630 PF00994 Probable molybdopterin binding domain THMIRHAS_15640 PF00591 Glycosyl transferase family, a/b domain THMIRHAS_15640 PF02885 Glycosyl transferase family, helical bundle domain THMIRHAS_15650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THMIRHAS_15650 PF10414 Sirohaem synthase dimerisation region THMIRHAS_15650 PF14824 Sirohaem biosynthesis protein central THMIRHAS_15660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THMIRHAS_15660 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAS_15660 PF01568 Molydopterin dinucleotide binding domain THMIRHAS_15660 PF00384 Molybdopterin oxidoreductase THMIRHAS_15670 PF13806 Rieske-like [2Fe-2S] domain THMIRHAS_15680 PF00069 Protein kinase domain THMIRHAS_15690 PF07690 Major Facilitator Superfamily THMIRHAS_15720 PF04542 Sigma-70 region 2 THMIRHAS_15720 PF08281 Sigma-70, region 4 THMIRHAS_15740 PF01479 S4 domain THMIRHAS_15740 PF00849 RNA pseudouridylate synthase THMIRHAS_15760 PF11798 IMS family HHH motif THMIRHAS_15760 PF11799 impB/mucB/samB family C-terminal domain THMIRHAS_15760 PF13438 Domain of unknown function (DUF4113) THMIRHAS_15760 PF00817 impB/mucB/samB family THMIRHAS_15780 PF04073 Aminoacyl-tRNA editing domain THMIRHAS_15780 PF03129 Anticodon binding domain THMIRHAS_15780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAS_15800 PF01926 50S ribosome-binding GTPase THMIRHAS_15870 PF13533 Biotin-lipoyl like THMIRHAS_15900 PF08534 Redoxin THMIRHAS_15910 PF00308 Bacterial dnaA protein THMIRHAS_15930 PF02769 AIR synthase related protein, C-terminal domain THMIRHAS_15930 PF00586 AIR synthase related protein, N-terminal domain THMIRHAS_15940 PF00551 Formyl transferase THMIRHAS_15960 PF00692 dUTPase THMIRHAS_15970 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THMIRHAS_15970 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THMIRHAS_15980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THMIRHAS_15980 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAS_15980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMIRHAS_15980 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMIRHAS_15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_15990 PF04324 BFD-like [2Fe-2S] binding domain THMIRHAS_15990 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_15990 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMIRHAS_15990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THMIRHAS_15990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMIRHAS_16000 PF00005 ABC transporter THMIRHAS_16010 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_16020 PF00005 ABC transporter THMIRHAS_16050 PF00480 ROK family THMIRHAS_16060 PF04305 Protein of unknown function (DUF455) THMIRHAS_16090 PF01272 Transcription elongation factor, GreA/GreB, C-term THMIRHAS_16090 PF03449 Transcription elongation factor, N-terminal THMIRHAS_16100 PF02142 MGS-like domain THMIRHAS_16100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMIRHAS_16100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THMIRHAS_16110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THMIRHAS_16110 PF00117 Glutamine amidotransferase class-I THMIRHAS_16120 PF00877 NlpC/P60 family THMIRHAS_16130 PF05173 Dihydrodipicolinate reductase, C-terminus THMIRHAS_16130 PF01113 Dihydrodipicolinate reductase, N-terminus THMIRHAS_16140 PF01556 DnaJ C terminal domain THMIRHAS_16140 PF00684 DnaJ central domain THMIRHAS_16140 PF00226 DnaJ domain THMIRHAS_16150 PF00012 Hsp70 protein THMIRHAS_16160 PF01025 GrpE THMIRHAS_16170 PF01513 ATP-NAD kinase THMIRHAS_16180 PF02463 RecF/RecN/SMC N terminal domain THMIRHAS_16190 PF01475 Ferric uptake regulator family THMIRHAS_16210 PF03658 RnfH family Ubiquitin THMIRHAS_16220 PF03364 Polyketide cyclase / dehydrase and lipid transport THMIRHAS_16240 PF01668 SmpB protein THMIRHAS_16250 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_16250 PF08448 PAS fold THMIRHAS_16260 PF07694 5TMR of 5TMR-LYT THMIRHAS_16260 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_16300 PF01026 TatD related DNase THMIRHAS_16310 PF09115 DNA polymerase III, delta subunit, C terminal THMIRHAS_16320 PF02223 Thymidylate kinase THMIRHAS_16330 PF02618 YceG-like family THMIRHAS_16340 PF01063 Amino-transferase class IV THMIRHAS_16350 PF00425 chorismate binding enzyme THMIRHAS_16350 PF04715 Anthranilate synthase component I, N terminal region THMIRHAS_16360 PF00109 Beta-ketoacyl synthase, N-terminal domain THMIRHAS_16360 PF02801 Beta-ketoacyl synthase, C-terminal domain THMIRHAS_16370 PF00550 Phosphopantetheine attachment site THMIRHAS_16390 PF00698 Acyl transferase domain THMIRHAS_16400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal THMIRHAS_16400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THMIRHAS_16410 PF02504 Fatty acid synthesis protein THMIRHAS_16420 PF01783 Ribosomal L32p protein family THMIRHAS_16440 PF02545 Maf-like protein THMIRHAS_16450 PF13419 Haloacid dehalogenase-like hydrolase THMIRHAS_16460 PF00849 RNA pseudouridylate synthase THMIRHAS_16460 PF01479 S4 domain THMIRHAS_16470 PF00575 S1 RNA binding domain THMIRHAS_16470 PF10150 Ribonuclease E/G family THMIRHAS_16470 PF12111 Polyribonucleotide phosphorylase C terminal THMIRHAS_16480 PF01451 Low molecular weight phosphotyrosine protein phosphatase THMIRHAS_16490 PF00849 RNA pseudouridylate synthase THMIRHAS_16520 PF00589 Phage integrase family THMIRHAS_16560 PF05818 Enterobacterial TraT complement resistance protein THMIRHAS_16610 PF02796 Helix-turn-helix domain of resolvase THMIRHAS_16610 PF00239 Resolvase, N terminal domain THMIRHAS_16740 PF05016 ParE toxin of type II toxin-antitoxin system, parDE THMIRHAS_16990 PF13362 Toprim domain THMIRHAS_16990 PF18818 Metallopeptidase superfamily domain THMIRHAS_16990 PF08401 Domain of unknown function (DUF1738) THMIRHAS_17060 PF08272 Topoisomerase I zinc-ribbon-like THMIRHAS_17060 PF01131 DNA topoisomerase THMIRHAS_17060 PF01751 Toprim domain THMIRHAS_17060 PF01396 Topoisomerase DNA binding C4 zinc finger THMIRHAS_17200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMIRHAS_17210 PF13426 PAS domain THMIRHAS_17210 PF08447 PAS fold THMIRHAS_17210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_17230 PF00072 Response regulator receiver domain THMIRHAS_17230 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_17240 PF13361 UvrD-like helicase C-terminal domain THMIRHAS_17240 PF12462 DNA helicase IV / RNA helicase N terminal THMIRHAS_17240 PF00580 UvrD/REP helicase N-terminal domain THMIRHAS_17260 PF00361 Proton-conducting membrane transporter THMIRHAS_17270 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus THMIRHAS_17270 PF00361 Proton-conducting membrane transporter THMIRHAS_17280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMIRHAS_17280 PF00361 Proton-conducting membrane transporter THMIRHAS_17290 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THMIRHAS_17300 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THMIRHAS_17310 PF12838 4Fe-4S dicluster domain THMIRHAS_17320 PF00146 NADH dehydrogenase THMIRHAS_17330 PF00384 Molybdopterin oxidoreductase THMIRHAS_17330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THMIRHAS_17330 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THMIRHAS_17340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMIRHAS_17340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THMIRHAS_17340 PF10531 SLBB domain THMIRHAS_17360 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THMIRHAS_17370 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THMIRHAS_17380 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THMIRHAS_17390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THMIRHAS_17400 PF03840 Preprotein translocase SecG subunit THMIRHAS_17410 PF00121 Triosephosphate isomerase THMIRHAS_17420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAS_17420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAS_17420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAS_17420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAS_17430 PF00809 Pterin binding enzyme THMIRHAS_17440 PF17862 AAA+ lid domain THMIRHAS_17440 PF01434 Peptidase family M41 THMIRHAS_17440 PF06480 FtsH Extracellular THMIRHAS_17440 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_17450 PF01728 FtsJ-like methyltransferase THMIRHAS_17460 PF01985 CRS1 / YhbY (CRM) domain THMIRHAS_17470 PF01053 Cys/Met metabolism PLP-dependent enzyme THMIRHAS_17480 PF00156 Phosphoribosyl transferase domain THMIRHAS_17500 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_17500 PF08245 Mur ligase middle domain THMIRHAS_17510 PF01039 Carboxyl transferase domain THMIRHAS_17510 PF17848 Acetyl-coA carboxylase zinc finger domain THMIRHAS_17520 PF00290 Tryptophan synthase alpha chain THMIRHAS_17530 PF00291 Pyridoxal-phosphate dependent enzyme THMIRHAS_17540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THMIRHAS_17550 PF01416 tRNA pseudouridine synthase THMIRHAS_17560 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMIRHAS_17560 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMIRHAS_17580 PF08525 Opacity-associated protein A N-terminal motif THMIRHAS_17580 PF01551 Peptidase family M23 THMIRHAS_17580 PF01476 LysM domain THMIRHAS_17590 PF00180 Isocitrate/isopropylmalate dehydrogenase THMIRHAS_17600 PF00694 Aconitase C-terminal domain THMIRHAS_17610 PF00330 Aconitase family (aconitate hydratase) THMIRHAS_17630 PF01938 TRAM domain THMIRHAS_17630 PF05958 tRNA (Uracil-5-)-methyltransferase THMIRHAS_17640 PF03466 LysR substrate binding domain THMIRHAS_17640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_17650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_17650 PF03466 LysR substrate binding domain THMIRHAS_17660 PF01925 Sulfite exporter TauE/SafE THMIRHAS_17680 PF08267 Cobalamin-independent synthase, N-terminal domain THMIRHAS_17680 PF01717 Cobalamin-independent synthase, Catalytic domain THMIRHAS_17700 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMIRHAS_17710 PF01177 Asp/Glu/Hydantoin racemase THMIRHAS_17750 PF01297 Zinc-uptake complex component A periplasmic THMIRHAS_17760 PF00005 ABC transporter THMIRHAS_17770 PF00950 ABC 3 transport family THMIRHAS_17780 PF00950 ABC 3 transport family THMIRHAS_17790 PF02742 Iron dependent repressor, metal binding and dimerisation domain THMIRHAS_17790 PF00950 ABC 3 transport family THMIRHAS_17810 PF01740 STAS domain THMIRHAS_17810 PF00916 Sulfate permease family THMIRHAS_17830 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) THMIRHAS_17840 PF01867 CRISPR associated protein Cas1 THMIRHAS_17850 PF09704 CRISPR-associated protein (Cas_Cas5) THMIRHAS_17860 PF09344 CT1975-like protein THMIRHAS_17890 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) THMIRHAS_17910 PF18395 Cas3 C-terminal domain THMIRHAS_17910 PF18019 HD domain THMIRHAS_17920 PF13280 WYL domain THMIRHAS_17930 PF06865 Pyrimidine/purine nucleoside phosphorylase THMIRHAS_17940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily THMIRHAS_17950 PF02492 CobW/HypB/UreG, nucleotide-binding domain THMIRHAS_17950 PF07683 Cobalamin synthesis protein cobW C-terminal domain THMIRHAS_17960 PF01475 Ferric uptake regulator family THMIRHAS_17970 PF12832 MFS_1 like family THMIRHAS_17980 PF01264 Chorismate synthase THMIRHAS_18000 PF00194 Eukaryotic-type carbonic anhydrase THMIRHAS_18010 PF05175 Methyltransferase small domain THMIRHAS_18020 PF00994 Probable molybdopterin binding domain THMIRHAS_18030 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_18030 PF05362 Lon protease (S16) C-terminal proteolytic domain THMIRHAS_18030 PF02190 ATP-dependent protease La (LON) substrate-binding domain THMIRHAS_18050 PF13472 GDSL-like Lipase/Acylhydrolase family THMIRHAS_18060 PF00005 ABC transporter THMIRHAS_18130 PF00216 Bacterial DNA-binding protein THMIRHAS_18140 PF03147 Ferredoxin-fold anticodon binding domain THMIRHAS_18140 PF03483 B3/4 domain THMIRHAS_18140 PF03484 tRNA synthetase B5 domain THMIRHAS_18140 PF01588 Putative tRNA binding domain THMIRHAS_18140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THMIRHAS_18150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THMIRHAS_18150 PF01409 tRNA synthetases class II core domain (F) THMIRHAS_18160 PF00453 Ribosomal protein L20 THMIRHAS_18170 PF01632 Ribosomal protein L35 THMIRHAS_18180 PF00707 Translation initiation factor IF-3, C-terminal domain THMIRHAS_18180 PF05198 Translation initiation factor IF-3, N-terminal domain THMIRHAS_18190 PF02824 TGS domain THMIRHAS_18190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMIRHAS_18190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMIRHAS_18190 PF03129 Anticodon binding domain THMIRHAS_18210 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_18210 PF00593 TonB dependent receptor THMIRHAS_18290 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAS_18290 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAS_18290 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_18300 PF00034 Cytochrome c THMIRHAS_18320 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family THMIRHAS_18330 PF08443 RimK-like ATP-grasp domain THMIRHAS_18330 PF18030 RimK PreATP-grasp domain THMIRHAS_18350 PF05231 MASE1 THMIRHAS_18350 PF00563 EAL domain THMIRHAS_18360 PF03547 Membrane transport protein THMIRHAS_18430 PF03050 Transposase IS66 family THMIRHAS_18430 PF13817 IS66 C-terminal element THMIRHAS_18430 PF13007 Transposase C of IS166 homeodomain THMIRHAS_18430 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_18440 PF01757 Acyltransferase family THMIRHAS_18450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THMIRHAS_18450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THMIRHAS_18460 PF10369 Small subunit of acetolactate synthase THMIRHAS_18470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAS_18470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAS_18470 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAS_18480 PF00929 Exonuclease THMIRHAS_18490 PF16491 CAAX prenyl protease N-terminal, five membrane helices THMIRHAS_18490 PF01435 Peptidase family M48 THMIRHAS_18500 PF01329 Pterin 4 alpha carbinolamine dehydratase THMIRHAS_18510 PF03193 RsgA GTPase THMIRHAS_18530 PF00034 Cytochrome c THMIRHAS_18540 PF00034 Cytochrome c THMIRHAS_18560 PF01926 50S ribosome-binding GTPase THMIRHAS_18560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THMIRHAS_18570 PF13360 PQQ-like domain THMIRHAS_18590 PF03129 Anticodon binding domain THMIRHAS_18590 PF13393 Histidyl-tRNA synthetase THMIRHAS_18610 PF04055 Radical SAM superfamily THMIRHAS_18620 PF00334 Nucleoside diphosphate kinase THMIRHAS_18630 PF01521 Iron-sulphur cluster biosynthesis THMIRHAS_18640 PF02082 Transcriptional regulator THMIRHAS_18650 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_18660 PF00588 SpoU rRNA Methylase family THMIRHAS_18670 PF00459 Inositol monophosphatase family THMIRHAS_18680 PF00583 Acetyltransferase (GNAT) family THMIRHAS_18700 PF08502 LeuA allosteric (dimerisation) domain THMIRHAS_18700 PF00682 HMGL-like THMIRHAS_18710 PF01066 CDP-alcohol phosphatidyltransferase THMIRHAS_18720 PF13686 DsrE/DsrF/DrsH-like family THMIRHAS_18740 PF01435 Peptidase family M48 THMIRHAS_18800 PF00920 Dehydratase family THMIRHAS_18810 PF00583 Acetyltransferase (GNAT) family THMIRHAS_18810 PF00696 Amino acid kinase family THMIRHAS_18820 PF00929 Exonuclease THMIRHAS_18830 PF00462 Glutaredoxin THMIRHAS_18840 PF13537 Glutamine amidotransferase domain THMIRHAS_18840 PF00733 Asparagine synthase THMIRHAS_18850 PF01121 Dephospho-CoA kinase THMIRHAS_18860 PF13183 4Fe-4S dicluster domain THMIRHAS_18860 PF02754 Cysteine-rich domain THMIRHAS_18870 PF01565 FAD binding domain THMIRHAS_18880 PF01565 FAD binding domain THMIRHAS_18880 PF02913 FAD linked oxidases, C-terminal domain THMIRHAS_18890 PF00266 Aminotransferase class-V THMIRHAS_18900 PF00106 short chain dehydrogenase THMIRHAS_18910 PF05958 tRNA (Uracil-5-)-methyltransferase THMIRHAS_18920 PF02581 Thiamine monophosphate synthase THMIRHAS_18930 PF00155 Aminotransferase class I and II THMIRHAS_18940 PF01960 ArgJ family THMIRHAS_18950 PF07516 SecA Wing and Scaffold domain THMIRHAS_18950 PF07517 SecA DEAD-like domain THMIRHAS_18950 PF01043 SecA preprotein cross-linking domain THMIRHAS_18950 PF02810 SEC-C motif THMIRHAS_18970 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase THMIRHAS_18980 PF02491 SHS2 domain inserted in FTSA THMIRHAS_18990 PF08478 POTRA domain, FtsQ-type THMIRHAS_18990 PF03799 Cell division protein FtsQ THMIRHAS_19000 PF07478 D-ala D-ala ligase C-terminus THMIRHAS_19000 PF01820 D-ala D-ala ligase N-terminus THMIRHAS_19010 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_19010 PF01225 Mur ligase family, catalytic domain THMIRHAS_19010 PF08245 Mur ligase middle domain THMIRHAS_19030 PF00266 Aminotransferase class-V THMIRHAS_19040 PF01458 Uncharacterized protein family (UPF0051) THMIRHAS_19050 PF00005 ABC transporter THMIRHAS_19060 PF01458 Uncharacterized protein family (UPF0051) THMIRHAS_19080 PF01297 Zinc-uptake complex component A periplasmic THMIRHAS_19090 PF00005 ABC transporter THMIRHAS_19100 PF00950 ABC 3 transport family THMIRHAS_19110 PF02203 Tar ligand binding domain homologue THMIRHAS_19110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_19110 PF00672 HAMP domain THMIRHAS_19120 PF12857 TOBE-like domain THMIRHAS_19120 PF00005 ABC transporter THMIRHAS_19130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THMIRHAS_19130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THMIRHAS_19140 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_19170 PF03459 TOBE domain THMIRHAS_19180 PF00186 Dihydrofolate reductase THMIRHAS_19190 PF00303 Thymidylate synthase THMIRHAS_19200 PF13651 Adenine-specific methyltransferase EcoRI THMIRHAS_19210 PF02963 Restriction endonuclease EcoRI THMIRHAS_19230 PF01790 Prolipoprotein diacylglyceryl transferase THMIRHAS_19240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_19240 PF00672 HAMP domain THMIRHAS_19240 PF12729 Four helix bundle sensory module for signal transduction THMIRHAS_19250 PF04101 Glycosyltransferase family 28 C-terminal domain THMIRHAS_19250 PF03033 Glycosyltransferase family 28 N-terminal domain THMIRHAS_19260 PF01098 Cell cycle protein THMIRHAS_19270 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_19270 PF08245 Mur ligase middle domain THMIRHAS_19280 PF00953 Glycosyl transferase family 4 THMIRHAS_19290 PF01225 Mur ligase family, catalytic domain THMIRHAS_19290 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_19290 PF08245 Mur ligase middle domain THMIRHAS_19300 PF08245 Mur ligase middle domain THMIRHAS_19300 PF02875 Mur ligase family, glutamate ligase domain THMIRHAS_19300 PF01225 Mur ligase family, catalytic domain THMIRHAS_19310 PF03717 Penicillin-binding Protein dimerisation domain THMIRHAS_19310 PF00905 Penicillin binding protein transpeptidase domain THMIRHAS_19330 PF00091 Tubulin/FtsZ family, GTPase domain THMIRHAS_19330 PF12327 FtsZ family, C-terminal domain THMIRHAS_19340 PF01795 MraW methylase family THMIRHAS_19350 PF02381 MraZ protein, putative antitoxin-like THMIRHAS_19390 PF04445 Putative SAM-dependent methyltransferase THMIRHAS_19410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THMIRHAS_19420 PF04348 LppC putative lipoprotein THMIRHAS_19430 PF02021 Uncharacterised protein family UPF0102 THMIRHAS_19440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THMIRHAS_19440 PF02896 PEP-utilising enzyme, TIM barrel domain THMIRHAS_19440 PF00391 PEP-utilising enzyme, mobile domain THMIRHAS_19460 PF00580 UvrD/REP helicase N-terminal domain THMIRHAS_19460 PF13361 UvrD-like helicase C-terminal domain THMIRHAS_19460 PF12705 PD-(D/E)XK nuclease superfamily THMIRHAS_19480 PF13333 Integrase core domain THMIRHAS_19480 PF00665 Integrase core domain THMIRHAS_19480 PF13276 HTH-like domain THMIRHAS_19500 PF00313 'Cold-shock' DNA-binding domain THMIRHAS_19510 PF00313 'Cold-shock' DNA-binding domain THMIRHAS_19530 PF01479 S4 domain THMIRHAS_19530 PF00849 RNA pseudouridylate synthase THMIRHAS_19560 PF08534 Redoxin THMIRHAS_19570 PF01292 Prokaryotic cytochrome b561 THMIRHAS_19590 PF01435 Peptidase family M48 THMIRHAS_19600 PF04011 LemA family THMIRHAS_19620 PF05698 Bacterial trigger factor protein (TF) C-terminus THMIRHAS_19640 PF01070 FMN-dependent dehydrogenase THMIRHAS_19650 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal THMIRHAS_19650 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal THMIRHAS_19690 PF04386 Stringent starvation protein B THMIRHAS_19700 PF02798 Glutathione S-transferase, N-terminal domain THMIRHAS_19700 PF00043 Glutathione S-transferase, C-terminal domain THMIRHAS_19710 PF00152 tRNA synthetases class II (D, K and N) THMIRHAS_19720 PF01132 Elongation factor P (EF-P) OB domain THMIRHAS_19720 PF08207 Elongation factor P (EF-P) KOW-like domain THMIRHAS_19720 PF09285 Elongation factor P, C-terminal THMIRHAS_19730 PF04055 Radical SAM superfamily THMIRHAS_19760 PF02646 RmuC family THMIRHAS_19810 PF00437 Type II/IV secretion system protein THMIRHAS_19830 PF00263 Bacterial type II and III secretion system protein THMIRHAS_19830 PF03958 Bacterial type II/III secretion system short domain THMIRHAS_19840 PF13401 AAA domain THMIRHAS_19840 PF01471 Putative peptidoglycan binding domain THMIRHAS_19860 PF10150 Ribonuclease E/G family THMIRHAS_19860 PF00575 S1 RNA binding domain THMIRHAS_19870 PF02545 Maf-like protein THMIRHAS_19900 PF00535 Glycosyl transferase family 2 THMIRHAS_19950 PF13439 Glycosyltransferase Family 4 THMIRHAS_19950 PF00534 Glycosyl transferases group 1 THMIRHAS_19960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THMIRHAS_19980 PF00664 ABC transporter transmembrane region THMIRHAS_19980 PF00005 ABC transporter THMIRHAS_19990 PF03279 Bacterial lipid A biosynthesis acyltransferase THMIRHAS_20000 PF00294 pfkB family carbohydrate kinase THMIRHAS_20000 PF01467 Cytidylyltransferase-like THMIRHAS_20010 PF13580 SIS domain THMIRHAS_20030 PF01063 Amino-transferase class IV THMIRHAS_20050 PF00202 Aminotransferase class-III THMIRHAS_20060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMIRHAS_20060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMIRHAS_20080 PF13817 IS66 C-terminal element THMIRHAS_20080 PF03050 Transposase IS66 family THMIRHAS_20080 PF13007 Transposase C of IS166 homeodomain THMIRHAS_20080 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_20110 PF13276 HTH-like domain THMIRHAS_20110 PF00665 Integrase core domain THMIRHAS_20110 PF13333 Integrase core domain THMIRHAS_20160 PF02132 RecR protein THMIRHAS_20160 PF13662 Toprim domain THMIRHAS_20170 PF02575 YbaB/EbfC DNA-binding family THMIRHAS_20180 PF12170 DNA polymerase III tau subunit V interacting with alpha THMIRHAS_20180 PF12169 DNA polymerase III subunits gamma and tau domain III THMIRHAS_20230 PF00437 Type II/IV secretion system protein THMIRHAS_20250 PF13629 Pilus formation protein N terminal region THMIRHAS_20250 PF00263 Bacterial type II and III secretion system protein THMIRHAS_20250 PF04972 BON domain THMIRHAS_20300 PF00873 AcrB/AcrD/AcrF family THMIRHAS_20330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) THMIRHAS_20340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMIRHAS_20340 PF11890 Domain of unknown function (DUF3410) THMIRHAS_20340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMIRHAS_20400 PF11412 Disulphide bond corrector protein DsbC THMIRHAS_20400 PF02683 Cytochrome C biogenesis protein transmembrane region THMIRHAS_20410 PF01220 Dehydroquinase class II THMIRHAS_20420 PF00364 Biotin-requiring enzyme THMIRHAS_20430 PF00289 Biotin carboxylase, N-terminal domain THMIRHAS_20430 PF02785 Biotin carboxylase C-terminal domain THMIRHAS_20430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMIRHAS_20450 PF01207 Dihydrouridine synthase (Dus) THMIRHAS_20460 PF02954 Bacterial regulatory protein, Fis family THMIRHAS_20470 PF01808 AICARFT/IMPCHase bienzyme THMIRHAS_20470 PF02142 MGS-like domain THMIRHAS_20480 PF02844 Phosphoribosylglycinamide synthetase, N domain THMIRHAS_20480 PF02843 Phosphoribosylglycinamide synthetase, C domain THMIRHAS_20480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THMIRHAS_20510 PF00005 ABC transporter THMIRHAS_20520 PF03379 CcmB protein THMIRHAS_20530 PF01578 Cytochrome C assembly protein THMIRHAS_20540 PF04995 Heme exporter protein D (CcmD) THMIRHAS_20550 PF03100 CcmE THMIRHAS_20560 PF01578 Cytochrome C assembly protein THMIRHAS_20560 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal THMIRHAS_20570 PF08534 Redoxin THMIRHAS_20580 PF03918 Cytochrome C biogenesis protein THMIRHAS_20590 PF03918 Cytochrome C biogenesis protein THMIRHAS_20600 PF03264 NapC/NirT cytochrome c family, N-terminal region THMIRHAS_20620 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAS_20620 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_20620 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAS_20630 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAS_20630 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_20630 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAS_20660 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAS_20660 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAS_20660 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_20670 PF10431 C-terminal, D2-small domain, of ClpB protein THMIRHAS_20670 PF02861 Clp amino terminal domain, pathogenicity island component THMIRHAS_20670 PF17871 AAA lid domain THMIRHAS_20670 PF07724 AAA domain (Cdc48 subfamily) THMIRHAS_20670 PF00004 ATPase family associated with various cellular activities (AAA) THMIRHAS_20690 PF06969 HemN C-terminal domain THMIRHAS_20690 PF04055 Radical SAM superfamily THMIRHAS_20700 PF01627 Hpt domain THMIRHAS_20700 PF00072 Response regulator receiver domain THMIRHAS_20700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_20700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_20700 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_20700 PF00672 HAMP domain THMIRHAS_20710 PF01170 Putative RNA methylase family UPF0020 THMIRHAS_20710 PF02926 THUMP domain THMIRHAS_20710 PF10672 S-adenosylmethionine-dependent methyltransferase THMIRHAS_20720 PF13406 Transglycosylase SLT domain THMIRHAS_20750 PF01252 Signal peptidase (SPase) II THMIRHAS_20760 PF08264 Anticodon-binding domain of tRNA THMIRHAS_20760 PF06827 Zinc finger found in FPG and IleRS THMIRHAS_20760 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAS_20770 PF01687 Riboflavin kinase THMIRHAS_20770 PF06574 FAD synthetase THMIRHAS_20780 PF03023 Lipid II flippase MurJ THMIRHAS_20800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMIRHAS_20800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMIRHAS_20800 PF00205 Thiamine pyrophosphate enzyme, central domain THMIRHAS_20810 PF01649 Ribosomal protein S20 THMIRHAS_20820 PF01618 MotA/TolQ/ExbB proton channel family THMIRHAS_20830 PF00691 OmpA family THMIRHAS_20830 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMIRHAS_20840 PF02590 Predicted SPOUT methyltransferase THMIRHAS_20860 PF01467 Cytidylyltransferase-like THMIRHAS_20870 PF00171 Aldehyde dehydrogenase family THMIRHAS_20900 PF08264 Anticodon-binding domain of tRNA THMIRHAS_20900 PF00133 tRNA synthetases class I (I, L, M and V) THMIRHAS_20900 PF13603 Leucyl-tRNA synthetase, Domain 2 THMIRHAS_20920 PF00795 Carbon-nitrogen hydrolase THMIRHAS_20930 PF03471 Transporter associated domain THMIRHAS_20930 PF00571 CBS domain THMIRHAS_20940 PF02130 Uncharacterized protein family UPF0054 THMIRHAS_20950 PF02562 PhoH-like protein THMIRHAS_20960 PF00919 Uncharacterized protein family UPF0004 THMIRHAS_20960 PF04055 Radical SAM superfamily THMIRHAS_20960 PF01938 TRAM domain THMIRHAS_20970 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_20970 PF00114 Pilin (bacterial filament) THMIRHAS_20980 PF00989 PAS fold THMIRHAS_20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_20980 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_20990 PF00072 Response regulator receiver domain THMIRHAS_20990 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_21030 PF07963 Prokaryotic N-terminal methylation motif THMIRHAS_21030 PF08334 Type II secretion system (T2SS), protein G THMIRHAS_21050 PF13609 Gram-negative porin THMIRHAS_21060 PF00380 Ribosomal protein S9/S16 THMIRHAS_21070 PF00572 Ribosomal protein L13 THMIRHAS_21080 PF00140 Sigma-70 factor, region 1.2 THMIRHAS_21080 PF04539 Sigma-70 region 3 THMIRHAS_21080 PF04542 Sigma-70 region 2 THMIRHAS_21080 PF03979 Sigma-70 factor, region 1.1 THMIRHAS_21080 PF04545 Sigma-70, region 4 THMIRHAS_21080 PF04546 Sigma-70, non-essential region THMIRHAS_21090 PF13662 Toprim domain THMIRHAS_21090 PF10410 DnaB-helicase binding domain of primase THMIRHAS_21090 PF08278 DNA primase DnaG DnaB-binding THMIRHAS_21090 PF08275 DNA primase catalytic core, N-terminal domain THMIRHAS_21090 PF01807 CHC2 zinc finger THMIRHAS_21100 PF09424 Yqey-like protein THMIRHAS_21110 PF01165 Ribosomal protein S21 THMIRHAS_21120 PF00814 Glycoprotease family THMIRHAS_21130 PF02660 Glycerol-3-phosphate acyltransferase THMIRHAS_21140 PF02152 Dihydroneopterin aldolase THMIRHAS_21180 PF02673 Bacitracin resistance protein BacA THMIRHAS_21200 PF01256 Carbohydrate kinase THMIRHAS_21200 PF03853 YjeF-related protein N-terminus THMIRHAS_21210 PF02222 ATP-grasp domain THMIRHAS_21210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THMIRHAS_21220 PF00731 AIR carboxylase THMIRHAS_21240 PF00563 EAL domain THMIRHAS_21240 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_21240 PF08448 PAS fold THMIRHAS_21250 PF02772 S-adenosylmethionine synthetase, central domain THMIRHAS_21250 PF02773 S-adenosylmethionine synthetase, C-terminal domain THMIRHAS_21250 PF00438 S-adenosylmethionine synthetase, N-terminal domain THMIRHAS_21260 PF02219 Methylenetetrahydrofolate reductase THMIRHAS_21270 PF04452 RNA methyltransferase THMIRHAS_21290 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THMIRHAS_21290 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THMIRHAS_21300 PF02424 ApbE family THMIRHAS_21310 PF02622 Uncharacterized ACR, COG1678 THMIRHAS_21320 PF03652 Holliday junction resolvase THMIRHAS_21330 PF00156 Phosphoribosyl transferase domain THMIRHAS_21340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMIRHAS_21340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMIRHAS_21350 PF01979 Amidohydrolase family THMIRHAS_21390 PF03976 Polyphosphate kinase 2 (PPK2) THMIRHAS_21400 PF01168 Alanine racemase, N-terminal domain THMIRHAS_21420 PF03807 NADP oxidoreductase coenzyme F420-dependent THMIRHAS_21420 PF14748 Pyrroline-5-carboxylate reductase dimerisation THMIRHAS_21430 PF02325 YGGT family THMIRHAS_21440 PF00561 alpha/beta hydrolase fold THMIRHAS_21470 PF07664 Ferrous iron transport protein B C terminus THMIRHAS_21470 PF07670 Nucleoside recognition THMIRHAS_21470 PF02421 Ferrous iron transport protein B THMIRHAS_21500 PF01243 Pyridoxamine 5'-phosphate oxidase THMIRHAS_21510 PF02230 Phospholipase/Carboxylesterase THMIRHAS_21530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMIRHAS_21530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMIRHAS_21550 PF10672 S-adenosylmethionine-dependent methyltransferase THMIRHAS_21550 PF17785 PUA-like domain THMIRHAS_21560 PF01597 Glycine cleavage H-protein THMIRHAS_21580 PF13426 PAS domain THMIRHAS_21580 PF01740 STAS domain THMIRHAS_21590 PF13411 MerR HTH family regulatory protein THMIRHAS_21600 PF03441 FAD binding domain of DNA photolyase THMIRHAS_21600 PF00875 DNA photolyase THMIRHAS_21650 PF05430 S-adenosyl-L-methionine-dependent methyltransferase THMIRHAS_21650 PF01266 FAD dependent oxidoreductase THMIRHAS_21660 PF00106 short chain dehydrogenase THMIRHAS_21690 PF00578 AhpC/TSA family THMIRHAS_21700 PF01625 Peptide methionine sulfoxide reductase THMIRHAS_21710 PF01627 Hpt domain THMIRHAS_21710 PF00672 HAMP domain THMIRHAS_21710 PF00072 Response regulator receiver domain THMIRHAS_21710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_21710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_21710 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_21720 PF03050 Transposase IS66 family THMIRHAS_21720 PF13817 IS66 C-terminal element THMIRHAS_21720 PF13007 Transposase C of IS166 homeodomain THMIRHAS_21720 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_21790 PF00762 Ferrochelatase THMIRHAS_21800 PF00285 Citrate synthase, C-terminal domain THMIRHAS_21810 PF01521 Iron-sulphur cluster biosynthesis THMIRHAS_21820 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMIRHAS_21820 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMIRHAS_21830 PF00174 Oxidoreductase molybdopterin binding domain THMIRHAS_21840 PF01794 Ferric reductase like transmembrane component THMIRHAS_21860 PF00118 TCP-1/cpn60 chaperonin family THMIRHAS_21870 PF00166 Chaperonin 10 Kd subunit THMIRHAS_21890 PF01472 PUA domain THMIRHAS_21890 PF00696 Amino acid kinase family THMIRHAS_21900 PF01018 GTP1/OBG THMIRHAS_21900 PF01926 50S ribosome-binding GTPase THMIRHAS_21910 PF01016 Ribosomal L27 protein THMIRHAS_21920 PF00829 Ribosomal prokaryotic L21 protein THMIRHAS_21930 PF00348 Polyprenyl synthetase THMIRHAS_21950 PF00436 Single-strand binding protein family THMIRHAS_21960 PF07690 Major Facilitator Superfamily THMIRHAS_21980 PF17760 UvrA interaction domain THMIRHAS_21980 PF17755 UvrA DNA-binding domain THMIRHAS_22000 PF02685 Glucokinase THMIRHAS_22010 PF00899 ThiF family THMIRHAS_22030 PF01196 Ribosomal protein L17 THMIRHAS_22040 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THMIRHAS_22040 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THMIRHAS_22040 PF01000 RNA polymerase Rpb3/RpoA insert domain THMIRHAS_22050 PF01479 S4 domain THMIRHAS_22050 PF00163 Ribosomal protein S4/S9 N-terminal domain THMIRHAS_22060 PF00411 Ribosomal protein S11 THMIRHAS_22070 PF00416 Ribosomal protein S13/S18 THMIRHAS_22080 PF00344 SecY translocase THMIRHAS_22090 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THMIRHAS_22100 PF00327 Ribosomal protein L30p/L7e THMIRHAS_22110 PF03719 Ribosomal protein S5, C-terminal domain THMIRHAS_22110 PF00333 Ribosomal protein S5, N-terminal domain THMIRHAS_22120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THMIRHAS_22130 PF00347 Ribosomal protein L6 THMIRHAS_22140 PF00410 Ribosomal protein S8 THMIRHAS_22150 PF00253 Ribosomal protein S14p/S29e THMIRHAS_22160 PF00673 ribosomal L5P family C-terminus THMIRHAS_22160 PF00281 Ribosomal protein L5 THMIRHAS_22170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THMIRHAS_22170 PF00467 KOW motif THMIRHAS_22180 PF00238 Ribosomal protein L14p/L23e THMIRHAS_22190 PF00366 Ribosomal protein S17 THMIRHAS_22200 PF00831 Ribosomal L29 protein THMIRHAS_22210 PF00252 Ribosomal protein L16p/L10e THMIRHAS_22220 PF00189 Ribosomal protein S3, C-terminal domain THMIRHAS_22220 PF07650 KH domain THMIRHAS_22230 PF00237 Ribosomal protein L22p/L17e THMIRHAS_22240 PF00203 Ribosomal protein S19 THMIRHAS_22250 PF03947 Ribosomal Proteins L2, C-terminal domain THMIRHAS_22250 PF00181 Ribosomal Proteins L2, RNA binding domain THMIRHAS_22260 PF00276 Ribosomal protein L23 THMIRHAS_22270 PF00573 Ribosomal protein L4/L1 family THMIRHAS_22280 PF00297 Ribosomal protein L3 THMIRHAS_22290 PF00338 Ribosomal protein S10p/S20e THMIRHAS_22300 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_22300 PF03144 Elongation factor Tu domain 2 THMIRHAS_22300 PF03143 Elongation factor Tu C-terminal domain THMIRHAS_22310 PF03764 Elongation factor G, domain IV THMIRHAS_22310 PF14492 Elongation Factor G, domain II THMIRHAS_22310 PF00679 Elongation factor G C-terminus THMIRHAS_22310 PF03144 Elongation factor Tu domain 2 THMIRHAS_22310 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_22320 PF00177 Ribosomal protein S7p/S5e THMIRHAS_22330 PF00164 Ribosomal protein S12/S23 THMIRHAS_22340 PF00623 RNA polymerase Rpb1, domain 2 THMIRHAS_22340 PF04998 RNA polymerase Rpb1, domain 5 THMIRHAS_22340 PF04997 RNA polymerase Rpb1, domain 1 THMIRHAS_22340 PF05000 RNA polymerase Rpb1, domain 4 THMIRHAS_22340 PF04983 RNA polymerase Rpb1, domain 3 THMIRHAS_22350 PF04563 RNA polymerase beta subunit THMIRHAS_22350 PF04560 RNA polymerase Rpb2, domain 7 THMIRHAS_22350 PF04561 RNA polymerase Rpb2, domain 2 THMIRHAS_22350 PF10385 RNA polymerase beta subunit external 1 domain THMIRHAS_22350 PF04565 RNA polymerase Rpb2, domain 3 THMIRHAS_22350 PF00562 RNA polymerase Rpb2, domain 6 THMIRHAS_22360 PF00542 Ribosomal protein L7/L12 C-terminal domain THMIRHAS_22360 PF16320 Ribosomal protein L7/L12 dimerisation domain THMIRHAS_22370 PF00466 Ribosomal protein L10 THMIRHAS_22380 PF00687 Ribosomal protein L1p/L10e family THMIRHAS_22390 PF00298 Ribosomal protein L11, RNA binding domain THMIRHAS_22390 PF03946 Ribosomal protein L11, N-terminal domain THMIRHAS_22400 PF02357 Transcription termination factor nusG THMIRHAS_22400 PF00467 KOW motif THMIRHAS_22410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THMIRHAS_22420 PF03144 Elongation factor Tu domain 2 THMIRHAS_22420 PF00009 Elongation factor Tu GTP binding domain THMIRHAS_22420 PF03143 Elongation factor Tu C-terminal domain THMIRHAS_22440 PF00849 RNA pseudouridylate synthase THMIRHAS_22450 PF00202 Aminotransferase class-III THMIRHAS_22480 PF13276 HTH-like domain THMIRHAS_22480 PF13333 Integrase core domain THMIRHAS_22480 PF00665 Integrase core domain THMIRHAS_22510 PF00171 Aldehyde dehydrogenase family THMIRHAS_22520 PF01979 Amidohydrolase family THMIRHAS_22530 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_22530 PF03707 Bacterial signalling protein N terminal repeat THMIRHAS_22530 PF00563 EAL domain THMIRHAS_22540 PF01809 Putative membrane protein insertion efficiency factor THMIRHAS_22550 PF02503 Polyphosphate kinase middle domain THMIRHAS_22550 PF13089 Polyphosphate kinase N-terminal domain THMIRHAS_22550 PF13090 Polyphosphate kinase C-terminal domain 2 THMIRHAS_22550 PF17941 Polyphosphate kinase C-terminal domain 1 THMIRHAS_22560 PF02541 Ppx/GppA phosphatase family THMIRHAS_22570 PF00175 Oxidoreductase NAD-binding domain THMIRHAS_22570 PF00258 Flavodoxin THMIRHAS_22570 PF00667 FAD binding domain THMIRHAS_22590 PF01261 Xylose isomerase-like TIM barrel THMIRHAS_22600 PF00156 Phosphoribosyl transferase domain THMIRHAS_22610 PF00300 Histidine phosphatase superfamily (branch 1) THMIRHAS_22620 PF05736 OprF membrane domain THMIRHAS_22620 PF00691 OmpA family THMIRHAS_22640 PF05552 Conserved TM helix THMIRHAS_22640 PF00924 Mechanosensitive ion channel THMIRHAS_22650 PF00696 Amino acid kinase family THMIRHAS_22660 PF04461 Protein of unknown function (DUF520) THMIRHAS_22670 PF00155 Aminotransferase class I and II THMIRHAS_22680 PF00689 Cation transporting ATPase, C-terminus THMIRHAS_22680 PF00690 Cation transporter/ATPase, N-terminus THMIRHAS_22720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_22720 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMIRHAS_22730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THMIRHAS_22730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THMIRHAS_22750 PF00119 ATP synthase A chain THMIRHAS_22760 PF00137 ATP synthase subunit C THMIRHAS_22770 PF00430 ATP synthase B/B' CF(0) THMIRHAS_22770 PF00213 ATP synthase delta (OSCP) subunit THMIRHAS_22780 PF00306 ATP synthase alpha/beta chain, C terminal domain THMIRHAS_22780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_22800 PF00692 dUTPase THMIRHAS_22820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMIRHAS_22820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMIRHAS_22820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMIRHAS_22820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMIRHAS_22830 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_22830 PF00672 HAMP domain THMIRHAS_22830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_22830 PF01627 Hpt domain THMIRHAS_22830 PF00072 Response regulator receiver domain THMIRHAS_22830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_22850 PF01613 Flavin reductase like domain THMIRHAS_22860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMIRHAS_22880 PF04127 DNA / pantothenate metabolism flavoprotein THMIRHAS_22880 PF02441 Flavoprotein THMIRHAS_22900 PF02203 Tar ligand binding domain homologue THMIRHAS_22900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_22900 PF00672 HAMP domain THMIRHAS_22910 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_22910 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THMIRHAS_22910 PF10518 TAT (twin-arginine translocation) pathway signal sequence THMIRHAS_22940 PF04002 RadC-like JAB domain THMIRHAS_22980 PF00830 Ribosomal L28 family THMIRHAS_22990 PF00471 Ribosomal protein L33 THMIRHAS_23020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain THMIRHAS_23020 PF06827 Zinc finger found in FPG and IleRS THMIRHAS_23020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain THMIRHAS_23040 PF03459 TOBE domain THMIRHAS_23040 PF00005 ABC transporter THMIRHAS_23050 PF00528 Binding-protein-dependent transport system inner membrane component THMIRHAS_23070 PF03459 TOBE domain THMIRHAS_23070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_23100 PF00578 AhpC/TSA family THMIRHAS_23100 PF10417 C-terminal domain of 1-Cys peroxiredoxin THMIRHAS_23110 PF01467 Cytidylyltransferase-like THMIRHAS_23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_23130 PF03466 LysR substrate binding domain THMIRHAS_23140 PF00672 HAMP domain THMIRHAS_23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_23140 PF00072 Response regulator receiver domain THMIRHAS_23140 PF01627 Hpt domain THMIRHAS_23140 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_23140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_23160 PF05193 Peptidase M16 inactive domain THMIRHAS_23170 PF00675 Insulinase (Peptidase family M16) THMIRHAS_23170 PF05193 Peptidase M16 inactive domain THMIRHAS_23180 PF00448 SRP54-type protein, GTPase domain THMIRHAS_23180 PF02881 SRP54-type protein, helical bundle domain THMIRHAS_23210 PF00109 Beta-ketoacyl synthase, N-terminal domain THMIRHAS_23210 PF02801 Beta-ketoacyl synthase, C-terminal domain THMIRHAS_23220 PF07977 FabA-like domain THMIRHAS_23230 PF03309 Type III pantothenate kinase THMIRHAS_23250 PF00579 tRNA synthetases class I (W and Y) THMIRHAS_23250 PF01479 S4 domain THMIRHAS_23260 PF01180 Dihydroorotate dehydrogenase THMIRHAS_23270 PF00588 SpoU rRNA Methylase family THMIRHAS_23280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THMIRHAS_23280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THMIRHAS_23290 PF02556 Preprotein translocase subunit SecB THMIRHAS_23300 PF00462 Glutaredoxin THMIRHAS_23320 PF06415 BPG-independent PGAM N-terminus (iPGM_N) THMIRHAS_23320 PF01676 Metalloenzyme superfamily THMIRHAS_23330 PF04898 Glutamate synthase central domain THMIRHAS_23330 PF01645 Conserved region in glutamate synthase THMIRHAS_23330 PF01493 GXGXG motif THMIRHAS_23330 PF00310 Glutamine amidotransferases class-II THMIRHAS_23340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMIRHAS_23340 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMIRHAS_23370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMIRHAS_23370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMIRHAS_23380 PF00082 Subtilase family THMIRHAS_23390 PF03480 Bacterial extracellular solute-binding protein, family 7 THMIRHAS_23400 PF00672 HAMP domain THMIRHAS_23400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_23400 PF02203 Tar ligand binding domain homologue THMIRHAS_23410 PF00226 DnaJ domain THMIRHAS_23410 PF01556 DnaJ C terminal domain THMIRHAS_23430 PF00593 TonB dependent receptor THMIRHAS_23430 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_23450 PF08534 Redoxin THMIRHAS_23460 PF03649 Uncharacterised protein family (UPF0014) THMIRHAS_23480 PF00005 ABC transporter THMIRHAS_23490 PF00580 UvrD/REP helicase N-terminal domain THMIRHAS_23490 PF13361 UvrD-like helicase C-terminal domain THMIRHAS_23500 PF00085 Thioredoxin THMIRHAS_23510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_23510 PF07498 Rho termination factor, N-terminal domain THMIRHAS_23510 PF07497 Rho termination factor, RNA-binding domain THMIRHAS_23520 PF01197 Ribosomal protein L31 THMIRHAS_23540 PF01208 Uroporphyrinogen decarboxylase (URO-D) THMIRHAS_23560 PF04362 Bacterial Fe(2+) trafficking THMIRHAS_23570 PF14815 NUDIX domain THMIRHAS_23570 PF00730 HhH-GPD superfamily base excision DNA repair protein THMIRHAS_23570 PF00633 Helix-hairpin-helix motif THMIRHAS_23570 PF10576 Iron-sulfur binding domain of endonuclease III THMIRHAS_23580 PF02390 Putative methyltransferase THMIRHAS_23600 PF06969 HemN C-terminal domain THMIRHAS_23600 PF04055 Radical SAM superfamily THMIRHAS_23610 PF07690 Major Facilitator Superfamily THMIRHAS_23620 PF01725 Ham1 family THMIRHAS_23630 PF03725 3' exoribonuclease family, domain 2 THMIRHAS_23630 PF01138 3' exoribonuclease family, domain 1 THMIRHAS_23640 PF03755 YicC-like family, N-terminal region THMIRHAS_23640 PF08340 Domain of unknown function (DUF1732) THMIRHAS_23650 PF07804 HipA-like C-terminal domain THMIRHAS_23650 PF13657 HipA N-terminal domain THMIRHAS_23660 PF01381 Helix-turn-helix THMIRHAS_23750 PF13411 MerR HTH family regulatory protein THMIRHAS_23770 PF17092 Penicillin-binding protein OB-like domain THMIRHAS_23770 PF00912 Transglycosylase THMIRHAS_23770 PF00905 Penicillin binding protein transpeptidase domain THMIRHAS_23780 PF03881 Fructosamine kinase THMIRHAS_23790 PF05191 Adenylate kinase, active site lid THMIRHAS_23810 PF00873 AcrB/AcrD/AcrF family THMIRHAS_23840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_23840 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_23840 PF00672 HAMP domain THMIRHAS_23850 PF00072 Response regulator receiver domain THMIRHAS_23850 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_23860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMIRHAS_23870 PF00873 AcrB/AcrD/AcrF family THMIRHAS_23880 PF00990 Diguanylate cyclase, GGDEF domain THMIRHAS_23880 PF08448 PAS fold THMIRHAS_23930 PF13817 IS66 C-terminal element THMIRHAS_23930 PF03050 Transposase IS66 family THMIRHAS_23930 PF13007 Transposase C of IS166 homeodomain THMIRHAS_23930 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_23960 PF13333 Integrase core domain THMIRHAS_23960 PF00665 Integrase core domain THMIRHAS_23960 PF13276 HTH-like domain THMIRHAS_23980 PF03050 Transposase IS66 family THMIRHAS_23980 PF13817 IS66 C-terminal element THMIRHAS_23980 PF13007 Transposase C of IS166 homeodomain THMIRHAS_23980 PF13005 zinc-finger binding domain of transposase IS66 THMIRHAS_24010 PF11965 Domain of unknown function (DUF3479) THMIRHAS_24010 PF02514 CobN/Magnesium Chelatase THMIRHAS_24020 PF00593 TonB dependent receptor THMIRHAS_24020 PF07715 TonB-dependent Receptor Plug Domain THMIRHAS_24030 PF11965 Domain of unknown function (DUF3479) THMIRHAS_24030 PF02514 CobN/Magnesium Chelatase THMIRHAS_24060 PF01048 Phosphorylase superfamily THMIRHAS_24070 PF02664 S-Ribosylhomocysteinase (LuxS) THMIRHAS_24090 PF04244 Deoxyribodipyrimidine photo-lyase-related protein THMIRHAS_24100 PF02811 PHP domain THMIRHAS_24100 PF00929 Exonuclease THMIRHAS_24100 PF01336 OB-fold nucleic acid binding domain THMIRHAS_24100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMIRHAS_24100 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMIRHAS_24100 PF11490 DNA polymerase III polC-type N-terminus II THMIRHAS_24100 PF14480 DNA polymerase III polC-type N-terminus I THMIRHAS_24100 PF14579 Helix-hairpin-helix motif THMIRHAS_24110 PF00875 DNA photolyase THMIRHAS_24110 PF03441 FAD binding domain of DNA photolyase THMIRHAS_24140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region THMIRHAS_24140 PF01243 Pyridoxamine 5'-phosphate oxidase THMIRHAS_24150 PF00486 Transcriptional regulatory protein, C terminal THMIRHAS_24150 PF00072 Response regulator receiver domain THMIRHAS_24160 PF00672 HAMP domain THMIRHAS_24160 PF00072 Response regulator receiver domain THMIRHAS_24160 PF01627 Hpt domain THMIRHAS_24160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMIRHAS_24160 PF00512 His Kinase A (phospho-acceptor) domain THMIRHAS_24160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THMIRHAS_24180 PF02678 Pirin THMIRHAS_24180 PF05726 Pirin C-terminal cupin domain THMIRHAS_24190 PF02525 Flavodoxin-like fold THMIRHAS_24200 PF03466 LysR substrate binding domain THMIRHAS_24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_24210 PF08447 PAS fold THMIRHAS_24210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_24210 PF08447 PAS fold THMIRHAS_24210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_24220 PF01145 SPFH domain / Band 7 family THMIRHAS_24270 PF00672 HAMP domain THMIRHAS_24270 PF02203 Tar ligand binding domain homologue THMIRHAS_24270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_24290 PF03466 LysR substrate binding domain THMIRHAS_24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THMIRHAS_24310 PF01725 Ham1 family THMIRHAS_24430 PF00101 Ribulose bisphosphate carboxylase, small chain THMIRHAS_24440 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THMIRHAS_24440 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THMIRHAS_24480 PF01370 NAD dependent epimerase/dehydratase family THMIRHAS_24480 PF02222 ATP-grasp domain THMIRHAS_24500 PF04542 Sigma-70 region 2 THMIRHAS_24500 PF04545 Sigma-70, region 4 THMIRHAS_24500 PF00140 Sigma-70 factor, region 1.2 THMIRHAS_24510 PF03781 Sulfatase-modifying factor enzyme 1 THMIRHAS_24510 PF12867 DinB superfamily THMIRHAS_24520 PF00155 Aminotransferase class I and II THMIRHAS_24550 PF01263 Aldose 1-epimerase THMIRHAS_24560 PF01761 3-dehydroquinate synthase THMIRHAS_24570 PF01202 Shikimate kinase THMIRHAS_24580 PF00625 Guanylate kinase THMIRHAS_24590 PF01192 RNA polymerase Rpb6 THMIRHAS_24600 PF02824 TGS domain THMIRHAS_24600 PF04607 Region found in RelA / SpoT proteins THMIRHAS_24600 PF13291 ACT domain THMIRHAS_24610 PF01042 Endoribonuclease L-PSP THMIRHAS_24630 PF00270 DEAD/DEAH box helicase THMIRHAS_24630 PF00271 Helicase conserved C-terminal domain THMIRHAS_24630 PF17191 RecG wedge domain THMIRHAS_24640 PF04345 Chorismate lyase THMIRHAS_24670 PF01040 UbiA prenyltransferase family THMIRHAS_24690 PF12804 MobA-like NTP transferase domain THMIRHAS_24690 PF00132 Bacterial transferase hexapeptide (six repeats) THMIRHAS_24700 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THMIRHAS_24700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THMIRHAS_24710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_24710 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMIRHAS_24720 PF00231 ATP synthase THMIRHAS_24730 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMIRHAS_24730 PF00306 ATP synthase alpha/beta chain, C terminal domain THMIRHAS_24730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMIRHAS_24740 PF00213 ATP synthase delta (OSCP) subunit THMIRHAS_24750 PF00430 ATP synthase B/B' CF(0) THMIRHAS_24760 PF00137 ATP synthase subunit C THMIRHAS_24770 PF00119 ATP synthase A chain THMIRHAS_24800 PF17762 HTH domain found in ParB protein THMIRHAS_24800 PF02195 ParB-like nuclease domain THMIRHAS_24810 PF13614 AAA domain THMIRHAS_24820 PF02527 rRNA small subunit methyltransferase G THMIRHAS_24830 PF01134 Glucose inhibited division protein A THMIRHAS_24830 PF13932 GidA associated domain THMIRHAS_24860 PF14489 QueF-like protein THMIRHAS_24860 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term THMIRHAS_24880 PF00850 Histone deacetylase domain THMIRHAS_24890 PF01205 Uncharacterized protein family UPF0029 THMIRHAS_24890 PF09186 Domain of unknown function (DUF1949) THMIRHAS_24900 PF00873 AcrB/AcrD/AcrF family THMIRHAS_24930 PF02203 Tar ligand binding domain homologue THMIRHAS_24930 PF00672 HAMP domain THMIRHAS_24930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMIRHAS_24950 PF01914 MarC family integral membrane protein THMIRHAS_24960 PF10396 GTP-binding protein TrmE N-terminus THMIRHAS_24960 PF12631 MnmE helical domain THMIRHAS_24960 PF01926 50S ribosome-binding GTPase THMIRHAS_24980 PF02096 60Kd inner membrane protein THMIRHAS_24980 PF14849 YidC periplasmic domain THMIRHAS_24990 PF00825 Ribonuclease P THMIRHAS_25000 PF00468 Ribosomal protein L34 THMIRHAS_25010 PF01925 Sulfite exporter TauE/SafE