locus-tag class description Thicy_0001 PF11638 DnaA N-terminal domain Thicy_0001 PF08299 Bacterial dnaA protein helix-turn-helix Thicy_0001 PF00308 Bacterial dnaA protein Thicy_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Thicy_0002 PF02767 DNA polymerase III beta subunit, central domain Thicy_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Thicy_0004 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding Thicy_0004 PF10518 TAT (twin-arginine translocation) pathway signal sequence Thicy_0004 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0005 PF01380 SIS domain Thicy_0006 PF06463 Molybdenum Cofactor Synthesis C Thicy_0006 PF04055 Radical SAM superfamily Thicy_0007 PF02597 ThiS family Thicy_0008 PF02391 MoaE protein Thicy_0009 PF03454 MoeA C-terminal region (domain IV) Thicy_0009 PF03453 MoeA N-terminal region (domain I and II) Thicy_0009 PF00994 Probable molybdopterin binding domain Thicy_0010 PF01967 MoaC family Thicy_0012 PF01370 NAD dependent epimerase/dehydratase family Thicy_0012 PF02222 ATP-grasp domain Thicy_0013 PF01048 Phosphorylase superfamily Thicy_0014 PF02664 S-Ribosylhomocysteinase (LuxS) Thicy_0016 PF02646 RmuC family Thicy_0017 PF12867 DinB superfamily Thicy_0017 PF03781 Sulfatase-modifying factor enzyme 1 Thicy_0018 PF00155 Aminotransferase class I and II Thicy_0020 PF05191 Adenylate kinase, active site lid Thicy_0021 PF17092 Penicillin-binding protein OB-like domain Thicy_0021 PF00912 Transglycosylase Thicy_0021 PF00905 Penicillin binding protein transpeptidase domain Thicy_0023 PF01138 3' exoribonuclease family, domain 1 Thicy_0023 PF03725 3' exoribonuclease family, domain 2 Thicy_0024 PF01725 Ham1 family Thicy_0025 PF04055 Radical SAM superfamily Thicy_0025 PF06969 HemN C-terminal domain Thicy_0027 PF00271 Helicase conserved C-terminal domain Thicy_0027 PF00270 DEAD/DEAH box helicase Thicy_0032 PF00561 alpha/beta hydrolase fold Thicy_0035 PF04143 Sulphur transport Thicy_0036 PF00916 Sulfate permease family Thicy_0036 PF01740 STAS domain Thicy_0037 PF02574 Homocysteine S-methyltransferase Thicy_0037 PF00809 Pterin binding enzyme Thicy_0037 PF02607 B12 binding domain Thicy_0037 PF02310 B12 binding domain Thicy_0037 PF02965 Vitamin B12 dependent methionine synthase, activation domain Thicy_0041 PF04345 Chorismate lyase Thicy_0042 PF00270 DEAD/DEAH box helicase Thicy_0042 PF17191 RecG wedge domain Thicy_0042 PF00271 Helicase conserved C-terminal domain Thicy_0043 PF01042 Endoribonuclease L-PSP Thicy_0044 PF13291 ACT domain Thicy_0044 PF04607 Region found in RelA / SpoT proteins Thicy_0044 PF02824 TGS domain Thicy_0045 PF01192 RNA polymerase Rpb6 Thicy_0046 PF00924 Mechanosensitive ion channel Thicy_0046 PF05552 Conserved TM helix Thicy_0047 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_0048 PF01488 Shikimate / quinate 5-dehydrogenase Thicy_0048 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Thicy_0048 PF08501 Shikimate dehydrogenase substrate binding domain Thicy_0049 PF00490 Delta-aminolevulinic acid dehydratase Thicy_0050 PF00174 Oxidoreductase molybdopterin binding domain Thicy_0052 PF01636 Phosphotransferase enzyme family Thicy_0053 PF03971 Monomeric isocitrate dehydrogenase Thicy_0054 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thicy_0054 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thicy_0054 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thicy_0054 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thicy_0055 PF00970 Oxidoreductase FAD-binding domain Thicy_0055 PF00111 2Fe-2S iron-sulfur cluster binding domain Thicy_0055 PF00175 Oxidoreductase NAD-binding domain Thicy_0056 PF03372 Endonuclease/Exonuclease/phosphatase family Thicy_0057 PF01842 ACT domain Thicy_0057 PF00551 Formyl transferase Thicy_0058 PF08351 Domain of unknown function (DUF1726) Thicy_0058 PF13718 GNAT acetyltransferase 2 Thicy_0058 PF17176 tRNA-binding domain Thicy_0058 PF05127 Helicase Thicy_0059 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Thicy_0059 PF01266 FAD dependent oxidoreductase Thicy_0064 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0066 PF00994 Probable molybdopterin binding domain Thicy_0066 PF18146 Damage-inducible protein CinA KH domain Thicy_0066 PF02464 Competence-damaged protein Thicy_0069 PF00691 OmpA family Thicy_0070 PF00462 Glutaredoxin Thicy_0070 PF08534 Redoxin Thicy_0071 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0071 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thicy_0072 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Thicy_0073 PF02348 Cytidylyltransferase Thicy_0074 PF00465 Iron-containing alcohol dehydrogenase Thicy_0075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Thicy_0076 PF00625 Guanylate kinase Thicy_0077 PF01202 Shikimate kinase Thicy_0078 PF01761 3-dehydroquinate synthase Thicy_0079 PF01263 Aldose 1-epimerase Thicy_0081 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Thicy_0081 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Thicy_0082 PF05166 YcgL domain Thicy_0083 PF11066 Protein of unknown function (DUF2867) Thicy_0083 PF13460 NAD(P)H-binding Thicy_0084 PF01743 Poly A polymerase head domain Thicy_0084 PF01966 HD domain Thicy_0084 PF12627 Probable RNA and SrmB- binding site of polymerase A Thicy_0085 PF01545 Cation efflux family Thicy_0085 PF16916 Dimerisation domain of Zinc Transporter Thicy_0087 PF00873 AcrB/AcrD/AcrF family Thicy_0088 PF02779 Transketolase, pyrimidine binding domain Thicy_0088 PF00456 Transketolase, thiamine diphosphate binding domain Thicy_0088 PF02780 Transketolase, C-terminal domain Thicy_0089 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Thicy_0089 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thicy_0090 PF00162 Phosphoglycerate kinase Thicy_0091 PF02887 Pyruvate kinase, alpha/beta domain Thicy_0091 PF00224 Pyruvate kinase, barrel domain Thicy_0092 PF01116 Fructose-bisphosphate aldolase class-II Thicy_0093 PF00267 Gram-negative porin Thicy_0096 PF01259 SAICAR synthetase Thicy_0098 PF00834 Ribulose-phosphate 3 epimerase family Thicy_0099 PF13419 Haloacid dehalogenase-like hydrolase Thicy_0100 PF00425 chorismate binding enzyme Thicy_0100 PF04715 Anthranilate synthase component I, N terminal region Thicy_0101 PF00117 Glutamine amidotransferase class-I Thicy_0102 PF02885 Glycosyl transferase family, helical bundle domain Thicy_0102 PF00591 Glycosyl transferase family, a/b domain Thicy_0103 PF00218 Indole-3-glycerol phosphate synthase Thicy_0104 PF02566 OsmC-like protein Thicy_0105 PF02675 S-adenosylmethionine decarboxylase Thicy_0106 PF17284 Spermidine synthase tetramerisation domain Thicy_0107 PF04055 Radical SAM superfamily Thicy_0107 PF00202 Aminotransferase class-III Thicy_0107 PF06968 Biotin and Thiamin Synthesis associated domain Thicy_0108 PF03144 Elongation factor Tu domain 2 Thicy_0108 PF00009 Elongation factor Tu GTP binding domain Thicy_0108 PF03143 Elongation factor Tu C-terminal domain Thicy_0109 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Thicy_0110 PF02357 Transcription termination factor nusG Thicy_0110 PF00467 KOW motif Thicy_0111 PF00298 Ribosomal protein L11, RNA binding domain Thicy_0111 PF03946 Ribosomal protein L11, N-terminal domain Thicy_0112 PF00687 Ribosomal protein L1p/L10e family Thicy_0113 PF00466 Ribosomal protein L10 Thicy_0114 PF16320 Ribosomal protein L7/L12 dimerisation domain Thicy_0114 PF00542 Ribosomal protein L7/L12 C-terminal domain Thicy_0115 PF10385 RNA polymerase beta subunit external 1 domain Thicy_0115 PF00562 RNA polymerase Rpb2, domain 6 Thicy_0115 PF04563 RNA polymerase beta subunit Thicy_0115 PF04561 RNA polymerase Rpb2, domain 2 Thicy_0115 PF04565 RNA polymerase Rpb2, domain 3 Thicy_0115 PF04560 RNA polymerase Rpb2, domain 7 Thicy_0116 PF05000 RNA polymerase Rpb1, domain 4 Thicy_0116 PF04998 RNA polymerase Rpb1, domain 5 Thicy_0116 PF04997 RNA polymerase Rpb1, domain 1 Thicy_0116 PF00623 RNA polymerase Rpb1, domain 2 Thicy_0116 PF04983 RNA polymerase Rpb1, domain 3 Thicy_0117 PF00164 Ribosomal protein S12/S23 Thicy_0118 PF00177 Ribosomal protein S7p/S5e Thicy_0119 PF14492 Elongation Factor G, domain II Thicy_0119 PF03764 Elongation factor G, domain IV Thicy_0119 PF00679 Elongation factor G C-terminus Thicy_0119 PF00009 Elongation factor Tu GTP binding domain Thicy_0119 PF03144 Elongation factor Tu domain 2 Thicy_0120 PF03143 Elongation factor Tu C-terminal domain Thicy_0120 PF00009 Elongation factor Tu GTP binding domain Thicy_0120 PF03144 Elongation factor Tu domain 2 Thicy_0121 PF00338 Ribosomal protein S10p/S20e Thicy_0122 PF00297 Ribosomal protein L3 Thicy_0123 PF00573 Ribosomal protein L4/L1 family Thicy_0124 PF00276 Ribosomal protein L23 Thicy_0125 PF03947 Ribosomal Proteins L2, C-terminal domain Thicy_0125 PF00181 Ribosomal Proteins L2, RNA binding domain Thicy_0126 PF00203 Ribosomal protein S19 Thicy_0127 PF00237 Ribosomal protein L22p/L17e Thicy_0128 PF00189 Ribosomal protein S3, C-terminal domain Thicy_0128 PF07650 KH domain Thicy_0129 PF00252 Ribosomal protein L16p/L10e Thicy_0130 PF00831 Ribosomal L29 protein Thicy_0131 PF00366 Ribosomal protein S17 Thicy_0132 PF00238 Ribosomal protein L14p/L23e Thicy_0133 PF00467 KOW motif Thicy_0133 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Thicy_0134 PF00281 Ribosomal protein L5 Thicy_0134 PF00673 ribosomal L5P family C-terminus Thicy_0135 PF00253 Ribosomal protein S14p/S29e Thicy_0136 PF00410 Ribosomal protein S8 Thicy_0137 PF00347 Ribosomal protein L6 Thicy_0138 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Thicy_0139 PF00333 Ribosomal protein S5, N-terminal domain Thicy_0139 PF03719 Ribosomal protein S5, C-terminal domain Thicy_0140 PF00327 Ribosomal protein L30p/L7e Thicy_0141 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Thicy_0142 PF00344 SecY translocase Thicy_0143 PF00416 Ribosomal protein S13/S18 Thicy_0144 PF00411 Ribosomal protein S11 Thicy_0145 PF00163 Ribosomal protein S4/S9 N-terminal domain Thicy_0145 PF01479 S4 domain Thicy_0146 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Thicy_0146 PF01000 RNA polymerase Rpb3/RpoA insert domain Thicy_0146 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Thicy_0147 PF01196 Ribosomal protein L17 Thicy_0148 PF01026 TatD related DNase Thicy_0149 PF00899 ThiF family Thicy_0151 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Thicy_0151 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Thicy_0153 PF02230 Phospholipase/Carboxylesterase Thicy_0155 PF02441 Flavoprotein Thicy_0155 PF04127 DNA / pantothenate metabolism flavoprotein Thicy_0156 PF17755 UvrA DNA-binding domain Thicy_0156 PF17760 UvrA interaction domain Thicy_0160 PF00875 DNA photolyase Thicy_0160 PF03441 FAD binding domain of DNA photolyase Thicy_0162 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Thicy_0163 PF07690 Major Facilitator Superfamily Thicy_0164 PF00436 Single-strand binding protein family Thicy_0165 PF00348 Polyprenyl synthetase Thicy_0166 PF00829 Ribosomal prokaryotic L21 protein Thicy_0167 PF01016 Ribosomal L27 protein Thicy_0168 PF01018 GTP1/OBG Thicy_0168 PF01926 50S ribosome-binding GTPase Thicy_0169 PF00696 Amino acid kinase family Thicy_0169 PF01472 PUA domain Thicy_0170 PF07690 Major Facilitator Superfamily Thicy_0172 PF02028 BCCT, betaine/carnitine/choline family transporter Thicy_0173 PF00166 Chaperonin 10 Kd subunit Thicy_0174 PF00118 TCP-1/cpn60 chaperonin family Thicy_0175 PF02774 Semialdehyde dehydrogenase, dimerisation domain Thicy_0175 PF01118 Semialdehyde dehydrogenase, NAD binding domain Thicy_0176 PF01521 Iron-sulphur cluster biosynthesis Thicy_0177 PF00285 Citrate synthase, C-terminal domain Thicy_0178 PF00572 Ribosomal protein L13 Thicy_0179 PF00380 Ribosomal protein S9/S16 Thicy_0180 PF13426 PAS domain Thicy_0180 PF01740 STAS domain Thicy_0181 PF13411 MerR HTH family regulatory protein Thicy_0182 PF03441 FAD binding domain of DNA photolyase Thicy_0182 PF00875 DNA photolyase Thicy_0187 PF01266 FAD dependent oxidoreductase Thicy_0188 PF00106 short chain dehydrogenase Thicy_0191 PF00950 ABC 3 transport family Thicy_0192 PF00005 ABC transporter Thicy_0193 PF01297 Zinc-uptake complex component A periplasmic Thicy_0195 PF01458 Uncharacterized protein family (UPF0051) Thicy_0196 PF00005 ABC transporter Thicy_0197 PF01458 Uncharacterized protein family (UPF0051) Thicy_0198 PF00266 Aminotransferase class-V Thicy_0199 PF08245 Mur ligase middle domain Thicy_0199 PF01225 Mur ligase family, catalytic domain Thicy_0199 PF02875 Mur ligase family, glutamate ligase domain Thicy_0200 PF01820 D-ala D-ala ligase N-terminus Thicy_0200 PF07478 D-ala D-ala ligase C-terminus Thicy_0201 PF03799 Cell division protein FtsQ Thicy_0201 PF08478 POTRA domain, FtsQ-type Thicy_0202 PF02491 SHS2 domain inserted in FTSA Thicy_0203 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Thicy_0205 PF07517 SecA DEAD-like domain Thicy_0205 PF07516 SecA Wing and Scaffold domain Thicy_0205 PF01043 SecA preprotein cross-linking domain Thicy_0205 PF02810 SEC-C motif Thicy_0206 PF01960 ArgJ family Thicy_0207 PF02581 Thiamine monophosphate synthase Thicy_0208 PF01121 Dephospho-CoA kinase Thicy_0210 PF13537 Glutamine amidotransferase domain Thicy_0210 PF00733 Asparagine synthase Thicy_0211 PF00462 Glutaredoxin Thicy_0212 PF00929 Exonuclease Thicy_0213 PF00696 Amino acid kinase family Thicy_0213 PF00583 Acetyltransferase (GNAT) family Thicy_0214 PF00920 Dehydratase family Thicy_0220 PF01435 Peptidase family M48 Thicy_0221 PF01206 Sulfurtransferase TusA Thicy_0222 PF00483 Nucleotidyl transferase Thicy_0223 PF00342 Phosphoglucose isomerase Thicy_0224 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Thicy_0224 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Thicy_0224 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thicy_0225 PF01066 CDP-alcohol phosphatidyltransferase Thicy_0226 PF08502 LeuA allosteric (dimerisation) domain Thicy_0226 PF00682 HMGL-like Thicy_0228 PF00583 Acetyltransferase (GNAT) family Thicy_0229 PF00459 Inositol monophosphatase family Thicy_0230 PF00588 SpoU rRNA Methylase family Thicy_0231 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_0232 PF02082 Transcriptional regulator Thicy_0233 PF01521 Iron-sulphur cluster biosynthesis Thicy_0234 PF00334 Nucleoside diphosphate kinase Thicy_0235 PF04055 Radical SAM superfamily Thicy_0237 PF03129 Anticodon binding domain Thicy_0237 PF13393 Histidyl-tRNA synthetase Thicy_0239 PF01011 PQQ enzyme repeat Thicy_0239 PF13360 PQQ-like domain Thicy_0240 PF01926 50S ribosome-binding GTPase Thicy_0240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Thicy_0241 PF02913 FAD linked oxidases, C-terminal domain Thicy_0241 PF01565 FAD binding domain Thicy_0242 PF00034 Cytochrome c Thicy_0243 PF00034 Cytochrome c Thicy_0245 PF03193 RsgA GTPase Thicy_0246 PF01329 Pterin 4 alpha carbinolamine dehydratase Thicy_0247 PF01435 Peptidase family M48 Thicy_0247 PF16491 CAAX prenyl protease N-terminal, five membrane helices Thicy_0248 PF00929 Exonuclease Thicy_0249 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Thicy_0249 PF00205 Thiamine pyrophosphate enzyme, central domain Thicy_0249 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Thicy_0250 PF10369 Small subunit of acetolactate synthase Thicy_0251 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Thicy_0251 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Thicy_0252 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Thicy_0252 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0253 PF01493 GXGXG motif Thicy_0253 PF01645 Conserved region in glutamate synthase Thicy_0253 PF04898 Glutamate synthase central domain Thicy_0253 PF00310 Glutamine amidotransferases class-II Thicy_0254 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thicy_0254 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Thicy_0255 PF01676 Metalloenzyme superfamily Thicy_0255 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Thicy_0256 PF00581 Rhodanese-like domain Thicy_0257 PF00462 Glutaredoxin Thicy_0258 PF02556 Preprotein translocase subunit SecB Thicy_0259 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Thicy_0259 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Thicy_0260 PF00588 SpoU rRNA Methylase family Thicy_0261 PF01180 Dihydroorotate dehydrogenase Thicy_0262 PF00579 tRNA synthetases class I (W and Y) Thicy_0262 PF01479 S4 domain Thicy_0263 PF08279 HTH domain Thicy_0263 PF03099 Biotin/lipoate A/B protein ligase family Thicy_0263 PF02237 Biotin protein ligase C terminal domain Thicy_0264 PF03309 Type III pantothenate kinase Thicy_0265 PF07977 FabA-like domain Thicy_0266 PF00109 Beta-ketoacyl synthase, N-terminal domain Thicy_0266 PF02801 Beta-ketoacyl synthase, C-terminal domain Thicy_0268 PF00448 SRP54-type protein, GTPase domain Thicy_0268 PF02881 SRP54-type protein, helical bundle domain Thicy_0269 PF05193 Peptidase M16 inactive domain Thicy_0269 PF00675 Insulinase (Peptidase family M16) Thicy_0270 PF05193 Peptidase M16 inactive domain Thicy_0272 PF01467 Cytidylyltransferase-like Thicy_0274 PF04461 Protein of unknown function (DUF520) Thicy_0275 PF00696 Amino acid kinase family Thicy_0277 PF00156 Phosphoribosyl transferase domain Thicy_0278 PF00175 Oxidoreductase NAD-binding domain Thicy_0278 PF00667 FAD binding domain Thicy_0278 PF00258 Flavodoxin Thicy_0279 PF02541 Ppx/GppA phosphatase family Thicy_0280 PF02503 Polyphosphate kinase middle domain Thicy_0280 PF13090 Polyphosphate kinase C-terminal domain 2 Thicy_0280 PF17941 Polyphosphate kinase C-terminal domain 1 Thicy_0280 PF13089 Polyphosphate kinase N-terminal domain Thicy_0281 PF01594 AI-2E family transporter Thicy_0284 PF00692 dUTPase Thicy_0285 PF12951 Passenger-associated-transport-repeat Thicy_0285 PF12951 Passenger-associated-transport-repeat Thicy_0286 PF01618 MotA/TolQ/ExbB proton channel family Thicy_0291 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Thicy_0291 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Thicy_0291 PF06827 Zinc finger found in FPG and IleRS Thicy_0292 PF08338 Domain of unknown function (DUF1731) Thicy_0292 PF01370 NAD dependent epimerase/dehydratase family Thicy_0295 PF01597 Glycine cleavage H-protein Thicy_0296 PF10672 S-adenosylmethionine-dependent methyltransferase Thicy_0296 PF17785 PUA-like domain Thicy_0297 PF00171 Aldehyde dehydrogenase family Thicy_0298 PF01979 Amidohydrolase family Thicy_0301 PF01168 Alanine racemase, N-terminal domain Thicy_0302 PF03976 Polyphosphate kinase 2 (PPK2) Thicy_0308 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Thicy_0308 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thicy_0314 PF01790 Prolipoprotein diacylglyceryl transferase Thicy_0315 PF00303 Thymidylate synthase Thicy_0316 PF00186 Dihydrofolate reductase Thicy_0317 PF00816 H-NS histone family Thicy_0319 PF01979 Amidohydrolase family Thicy_0320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Thicy_0320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Thicy_0321 PF00156 Phosphoribosyl transferase domain Thicy_0322 PF03652 Holliday junction resolvase Thicy_0323 PF02622 Uncharacterized ACR, COG1678 Thicy_0325 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Thicy_0325 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Thicy_0326 PF14403 Circularly permuted ATP-grasp type 2 Thicy_0328 PF10005 zinc-ribbon domain Thicy_0328 PF15887 Putative zinc-binding metallo-peptidase Thicy_0329 PF03853 YjeF-related protein N-terminus Thicy_0329 PF01256 Carbohydrate kinase Thicy_0330 PF00471 Ribosomal protein L33 Thicy_0331 PF00830 Ribosomal L28 family Thicy_0332 PF04002 RadC-like JAB domain Thicy_0333 PF00561 alpha/beta hydrolase fold Thicy_0333 PF07021 Methionine biosynthesis protein MetW Thicy_0334 PF00561 alpha/beta hydrolase fold Thicy_0335 PF02325 YGGT family Thicy_0336 PF14748 Pyrroline-5-carboxylate reductase dimerisation Thicy_0336 PF03807 NADP oxidoreductase coenzyme F420-dependent Thicy_0337 PF01809 Putative membrane protein insertion efficiency factor Thicy_0338 PF02649 Type I GTP cyclohydrolase folE2 Thicy_0339 PF02492 CobW/HypB/UreG, nucleotide-binding domain Thicy_0339 PF07683 Cobalamin synthesis protein cobW C-terminal domain Thicy_0340 PF06039 Malate:quinone oxidoreductase (Mqo) Thicy_0342 PF00248 Aldo/keto reductase family Thicy_0344 PF00578 AhpC/TSA family Thicy_0353 PF01043 SecA preprotein cross-linking domain Thicy_0353 PF07517 SecA DEAD-like domain Thicy_0354 PF00141 Peroxidase Thicy_0355 PF01433 Peptidase family M1 domain Thicy_0355 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Thicy_0355 PF11940 Domain of unknown function (DUF3458) Ig-like fold Thicy_0357 PF00365 Phosphofructokinase Thicy_0358 PF00570 HRDC domain Thicy_0358 PF01612 3'-5' exonuclease Thicy_0360 PF02875 Mur ligase family, glutamate ligase domain Thicy_0360 PF08245 Mur ligase middle domain Thicy_0360 PF01225 Mur ligase family, catalytic domain Thicy_0362 PF00593 TonB dependent receptor Thicy_0362 PF07715 TonB-dependent Receptor Plug Domain Thicy_0363 PF03109 ABC1 family Thicy_0365 PF01209 ubiE/COQ5 methyltransferase family Thicy_0367 PF07724 AAA domain (Cdc48 subfamily) Thicy_0367 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0368 PF00586 AIR synthase related protein, N-terminal domain Thicy_0368 PF02769 AIR synthase related protein, C-terminal domain Thicy_0370 PF01678 Diaminopimelate epimerase Thicy_0372 PF02899 Phage integrase, N-terminal SAM-like domain Thicy_0372 PF00589 Phage integrase family Thicy_0373 PF00227 Proteasome subunit Thicy_0374 PF10119 Predicted methyltransferase regulatory domain Thicy_0374 PF13847 Methyltransferase domain Thicy_0376 PF07724 AAA domain (Cdc48 subfamily) Thicy_0376 PF10431 C-terminal, D2-small domain, of ClpB protein Thicy_0376 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0376 PF17871 AAA lid domain Thicy_0376 PF02861 Clp amino terminal domain, pathogenicity island component Thicy_0377 PF05170 AsmA family Thicy_0379 PF00893 Small Multidrug Resistance protein Thicy_0384 PF03466 LysR substrate binding domain Thicy_0384 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_0387 PF08267 Cobalamin-independent synthase, N-terminal domain Thicy_0387 PF01717 Cobalamin-independent synthase, Catalytic domain Thicy_0388 PF01032 FecCD transport family Thicy_0389 PF00005 ABC transporter Thicy_0390 PF02843 Phosphoribosylglycinamide synthetase, C domain Thicy_0390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Thicy_0390 PF02844 Phosphoribosylglycinamide synthetase, N domain Thicy_0391 PF01808 AICARFT/IMPCHase bienzyme Thicy_0391 PF02142 MGS-like domain Thicy_0392 PF02954 Bacterial regulatory protein, Fis family Thicy_0393 PF01207 Dihydrouridine synthase (Dus) Thicy_0395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Thicy_0395 PF00289 Biotin carboxylase, N-terminal domain Thicy_0395 PF02785 Biotin carboxylase C-terminal domain Thicy_0396 PF00364 Biotin-requiring enzyme Thicy_0397 PF01220 Dehydroquinase class II Thicy_0398 PF11412 Disulphide bond corrector protein DsbC Thicy_0398 PF02683 Cytochrome C biogenesis protein transmembrane region Thicy_0399 PF04186 FxsA cytoplasmic membrane protein Thicy_0401 PF10119 Predicted methyltransferase regulatory domain Thicy_0401 PF13847 Methyltransferase domain Thicy_0404 PF01479 S4 domain Thicy_0404 PF00849 RNA pseudouridylate synthase Thicy_0407 PF03459 TOBE domain Thicy_0407 PF00005 ABC transporter Thicy_0411 PF13411 MerR HTH family regulatory protein Thicy_0415 PF03459 TOBE domain Thicy_0415 PF00005 ABC transporter Thicy_0416 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_0418 PF03459 TOBE domain Thicy_0418 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_0419 PF01381 Helix-turn-helix Thicy_0420 PF07804 HipA-like C-terminal domain Thicy_0420 PF13657 HipA N-terminal domain Thicy_0421 PF01758 Sodium Bile acid symporter family Thicy_0422 PF00072 Response regulator receiver domain Thicy_0422 PF02954 Bacterial regulatory protein, Fis family Thicy_0422 PF00158 Sigma-54 interaction domain Thicy_0423 PF00512 His Kinase A (phospho-acceptor) domain Thicy_0423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_0423 PF00989 PAS fold Thicy_0424 PF00753 Metallo-beta-lactamase superfamily Thicy_0428 PF00578 AhpC/TSA family Thicy_0429 PF13419 Haloacid dehalogenase-like hydrolase Thicy_0430 PF00293 NUDIX domain Thicy_0431 PF00459 Inositol monophosphatase family Thicy_0432 PF00202 Aminotransferase class-III Thicy_0433 PF00581 Rhodanese-like domain Thicy_0434 PF08534 Redoxin Thicy_0435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Thicy_0437 PF05362 Lon protease (S16) C-terminal proteolytic domain Thicy_0437 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0437 PF02190 ATP-dependent protease La (LON) substrate-binding domain Thicy_0438 PF00994 Probable molybdopterin binding domain Thicy_0439 PF05175 Methyltransferase small domain Thicy_0440 PF01264 Chorismate synthase Thicy_0441 PF12832 MFS_1 like family Thicy_0442 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Thicy_0443 PF06865 Pyrimidine/purine nucleoside phosphorylase Thicy_0445 PF00579 tRNA synthetases class I (W and Y) Thicy_0446 PF03544 Gram-negative bacterial TonB protein C-terminal Thicy_0447 PF02472 Biopolymer transport protein ExbD/TolR Thicy_0448 PF01618 MotA/TolQ/ExbB proton channel family Thicy_0454 PF00571 CBS domain Thicy_0454 PF00478 IMP dehydrogenase / GMP reductase domain Thicy_0455 PF00117 Glutamine amidotransferase class-I Thicy_0455 PF02540 NAD synthase Thicy_0455 PF00958 GMP synthase C terminal domain Thicy_0457 PF14437 MafB19-like deaminase Thicy_0458 PF00183 Hsp90 protein Thicy_0459 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thicy_0459 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Thicy_0460 PF00849 RNA pseudouridylate synthase Thicy_0461 PF01451 Low molecular weight phosphotyrosine protein phosphatase Thicy_0462 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Thicy_0463 PF12399 Branched-chain amino acid ATP-binding cassette transporter Thicy_0463 PF00005 ABC transporter Thicy_0467 PF01699 Sodium/calcium exchanger protein Thicy_0469 PF00005 ABC transporter Thicy_0470 PF02405 Permease MlaE Thicy_0471 PF02470 MlaD protein Thicy_0474 PF00005 ABC transporter Thicy_0475 PF01061 ABC-2 type transporter Thicy_0477 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thicy_0478 PF01634 ATP phosphoribosyltransferase Thicy_0479 PF00815 Histidinol dehydrogenase Thicy_0480 PF00155 Aminotransferase class I and II Thicy_0481 PF01784 NIF3 (NGG1p interacting factor 3) Thicy_0482 PF00355 Rieske [2Fe-2S] domain Thicy_0482 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Thicy_0483 PF00033 Cytochrome b/b6/petB Thicy_0483 PF00032 Cytochrome b(C-terminal)/b6/petD Thicy_0484 PF02167 Cytochrome C1 family Thicy_0485 PF18073 Rubredoxin metal binding domain Thicy_0486 PF00459 Inositol monophosphatase family Thicy_0487 PF01595 Cyclin M transmembrane N-terminal domain Thicy_0487 PF00571 CBS domain Thicy_0487 PF03471 Transporter associated domain Thicy_0489 PF02881 SRP54-type protein, helical bundle domain Thicy_0489 PF02978 Signal peptide binding domain Thicy_0489 PF00448 SRP54-type protein, GTPase domain Thicy_0490 PF00886 Ribosomal protein S16 Thicy_0491 PF01782 RimM N-terminal domain Thicy_0491 PF05239 PRC-barrel domain Thicy_0492 PF01746 tRNA (Guanine-1)-methyltransferase Thicy_0493 PF01245 Ribosomal protein L19 Thicy_0496 PF08443 RimK-like ATP-grasp domain Thicy_0496 PF18030 RimK PreATP-grasp domain Thicy_0499 PF00085 Thioredoxin Thicy_0500 PF00488 MutS domain V Thicy_0500 PF05192 MutS domain III Thicy_0500 PF05190 MutS family domain IV Thicy_0500 PF05188 MutS domain II Thicy_0500 PF01624 MutS domain I Thicy_0501 PF02464 Competence-damaged protein Thicy_0502 PF00154 recA bacterial DNA recombination protein Thicy_0503 PF02631 RecX family Thicy_0504 PF02272 DHHA1 domain Thicy_0504 PF01411 tRNA synthetases class II (A) Thicy_0504 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Thicy_0505 PF13840 ACT domain Thicy_0505 PF01842 ACT domain Thicy_0505 PF00696 Amino acid kinase family Thicy_0506 PF08331 Domain of unknown function (DUF1730) Thicy_0507 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Thicy_0508 PF11741 AMIN domain Thicy_0508 PF01520 N-acetylmuramoyl-L-alanine amidase Thicy_0509 PF01119 DNA mismatch repair protein, C-terminal domain Thicy_0509 PF08676 MutL C terminal dimerisation domain Thicy_0511 PF17209 Hfq protein Thicy_0512 PF16360 GTP-binding GTPase Middle Region Thicy_0512 PF13167 GTP-binding GTPase N-terminal Thicy_0512 PF01926 50S ribosome-binding GTPase Thicy_0513 PF01145 SPFH domain / Band 7 family Thicy_0513 PF12221 Bacterial membrane protein N terminal Thicy_0514 PF01145 SPFH domain / Band 7 family Thicy_0515 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) Thicy_0516 PF13393 Histidyl-tRNA synthetase Thicy_0517 PF00709 Adenylosuccinate synthetase Thicy_0520 PF05552 Conserved TM helix Thicy_0520 PF00924 Mechanosensitive ion channel Thicy_0522 PF00749 tRNA synthetases class I (E and Q), catalytic domain Thicy_0523 PF13286 Phosphohydrolase-associated domain Thicy_0523 PF01966 HD domain Thicy_0524 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Thicy_0525 PF13538 UvrD-like helicase C-terminal domain Thicy_0526 PF12705 PD-(D/E)XK nuclease superfamily Thicy_0526 PF00580 UvrD/REP helicase N-terminal domain Thicy_0526 PF13361 UvrD-like helicase C-terminal domain Thicy_0527 PF17946 RecC C-terminal domain Thicy_0528 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Thicy_0528 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Thicy_0535 PF12161 HsdM N-terminal domain Thicy_0535 PF02384 N-6 DNA Methylase Thicy_0539 PF02661 Fic/DOC family Thicy_0541 PF11867 Domain of unknown function (DUF3387) Thicy_0541 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Thicy_0541 PF18766 SWI2/SNF2 ATPase Thicy_0545 PF02146 Sir2 family Thicy_0548 PF06271 RDD family Thicy_0549 PF06480 FtsH Extracellular Thicy_0549 PF17862 AAA+ lid domain Thicy_0549 PF01434 Peptidase family M41 Thicy_0549 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0557 PF07728 AAA domain (dynein-related subfamily) Thicy_0557 PF12102 Domain of unknown function (DUF3578) Thicy_0561 PF00929 Exonuclease Thicy_0562 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thicy_0564 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Thicy_0564 PF00270 DEAD/DEAH box helicase Thicy_0564 PF04408 Helicase associated domain (HA2) Thicy_0564 PF11898 Domain of unknown function (DUF3418) Thicy_0564 PF00271 Helicase conserved C-terminal domain Thicy_0566 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thicy_0566 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thicy_0566 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thicy_0566 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thicy_0571 PF01497 Periplasmic binding protein Thicy_0572 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Thicy_0572 PF12557 Cob(I)alamin adenosyltransferase N terminal Thicy_0573 PF06167 Glucose-regulated metallo-peptidase M90 Thicy_0574 PF09905 DNA-binding protein VF530 Thicy_0575 PF07152 YaeQ protein Thicy_0578 PF00593 TonB dependent receptor Thicy_0578 PF07715 TonB-dependent Receptor Plug Domain Thicy_0581 PF00730 HhH-GPD superfamily base excision DNA repair protein Thicy_0581 PF00633 Helix-hairpin-helix motif Thicy_0581 PF10576 Iron-sulfur binding domain of endonuclease III Thicy_0582 PF02508 Rnf-Nqr subunit, membrane protein Thicy_0583 PF04205 FMN-binding domain Thicy_0584 PF03116 NQR2, RnfD, RnfE family Thicy_0585 PF10531 SLBB domain Thicy_0585 PF13375 RnfC Barrel sandwich hybrid domain Thicy_0585 PF12838 4Fe-4S dicluster domain Thicy_0585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Thicy_0586 PF04060 Putative Fe-S cluster Thicy_0587 PF02508 Rnf-Nqr subunit, membrane protein Thicy_0588 PF01588 Putative tRNA binding domain Thicy_0588 PF09334 tRNA synthetases class I (M) Thicy_0589 PF10609 NUBPL iron-transfer P-loop NTPase Thicy_0590 PF00692 dUTPase Thicy_0592 PF00551 Formyl transferase Thicy_0593 PF00586 AIR synthase related protein, N-terminal domain Thicy_0593 PF02769 AIR synthase related protein, C-terminal domain Thicy_0596 PF08534 Redoxin Thicy_0601 PF03129 Anticodon binding domain Thicy_0601 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thicy_0601 PF04073 Aminoacyl-tRNA editing domain Thicy_0602 PF02545 Maf-like protein Thicy_0603 PF00575 S1 RNA binding domain Thicy_0603 PF10150 Ribonuclease E/G family Thicy_0604 PF00899 ThiF family Thicy_0605 PF17827 PrmC N-terminal domain Thicy_0605 PF13847 Methyltransferase domain Thicy_0606 PF00472 RF-1 domain Thicy_0606 PF03462 PCRF domain Thicy_0607 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Thicy_0607 PF01488 Shikimate / quinate 5-dehydrogenase Thicy_0607 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Thicy_0608 PF00583 Acetyltransferase (GNAT) family Thicy_0609 PF00202 Aminotransferase class-III Thicy_0610 PF06339 Ectoine synthase Thicy_0611 PF09456 RcsC Alpha-Beta-Loop (ABL) Thicy_0611 PF00512 His Kinase A (phospho-acceptor) domain Thicy_0611 PF00072 Response regulator receiver domain Thicy_0611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_0613 PF00521 DNA gyrase/topoisomerase IV, subunit A Thicy_0613 PF03989 DNA gyrase C-terminal domain, beta-propeller Thicy_0616 PF00330 Aconitase family (aconitate hydratase) Thicy_0617 PF00694 Aconitase C-terminal domain Thicy_0618 PF00180 Isocitrate/isopropylmalate dehydrogenase Thicy_0619 PF04225 Opacity-associated protein A LysM-like domain Thicy_0619 PF01551 Peptidase family M23 Thicy_0620 PF01118 Semialdehyde dehydrogenase, NAD binding domain Thicy_0620 PF02774 Semialdehyde dehydrogenase, dimerisation domain Thicy_0621 PF01416 tRNA pseudouridine synthase Thicy_0622 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Thicy_0623 PF00291 Pyridoxal-phosphate dependent enzyme Thicy_0624 PF00290 Tryptophan synthase alpha chain Thicy_0625 PF17848 Acetyl-coA carboxylase zinc finger domain Thicy_0625 PF01039 Carboxyl transferase domain Thicy_0626 PF08245 Mur ligase middle domain Thicy_0626 PF02875 Mur ligase family, glutamate ligase domain Thicy_0628 PF00156 Phosphoribosyl transferase domain Thicy_0629 PF01053 Cys/Met metabolism PLP-dependent enzyme Thicy_0630 PF01985 CRS1 / YhbY (CRM) domain Thicy_0631 PF01728 FtsJ-like methyltransferase Thicy_0632 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0632 PF17862 AAA+ lid domain Thicy_0632 PF06480 FtsH Extracellular Thicy_0632 PF01434 Peptidase family M41 Thicy_0633 PF00809 Pterin binding enzyme Thicy_0634 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thicy_0634 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thicy_0634 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thicy_0634 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thicy_0635 PF00121 Triosephosphate isomerase Thicy_0636 PF03840 Preprotein translocase SecG subunit Thicy_0637 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Thicy_0638 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Thicy_0639 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Thicy_0640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Thicy_0642 PF10531 SLBB domain Thicy_0642 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Thicy_0642 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Thicy_0643 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Thicy_0643 PF00384 Molybdopterin oxidoreductase Thicy_0643 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Thicy_0644 PF00146 NADH dehydrogenase Thicy_0645 PF12838 4Fe-4S dicluster domain Thicy_0646 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Thicy_0647 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Thicy_0648 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Thicy_0648 PF00361 Proton-conducting membrane transporter Thicy_0649 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Thicy_0649 PF00361 Proton-conducting membrane transporter Thicy_0650 PF00361 Proton-conducting membrane transporter Thicy_0652 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thicy_0652 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thicy_0652 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thicy_0652 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thicy_0653 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thicy_0655 PF12848 ABC transporter Thicy_0655 PF00005 ABC transporter Thicy_0658 PF05698 Bacterial trigger factor protein (TF) C-terminus Thicy_0658 PF05697 Bacterial trigger factor protein (TF) Thicy_0658 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thicy_0659 PF00574 Clp protease Thicy_0660 PF06689 ClpX C4-type zinc finger Thicy_0660 PF10431 C-terminal, D2-small domain, of ClpB protein Thicy_0660 PF07724 AAA domain (Cdc48 subfamily) Thicy_0661 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0661 PF05362 Lon protease (S16) C-terminal proteolytic domain Thicy_0661 PF02190 ATP-dependent protease La (LON) substrate-binding domain Thicy_0662 PF08007 Cupin superfamily protein Thicy_0663 PF00206 Lyase Thicy_0663 PF08328 Adenylosuccinate lyase C-terminal Thicy_0664 PF00330 Aconitase family (aconitate hydratase) Thicy_0664 PF06434 Aconitate hydratase 2 N-terminus Thicy_0664 PF11791 Aconitate B N-terminal domain Thicy_0667 PF00950 ABC 3 transport family Thicy_0668 PF00950 ABC 3 transport family Thicy_0669 PF00005 ABC transporter Thicy_0670 PF01297 Zinc-uptake complex component A periplasmic Thicy_0672 PF00989 PAS fold Thicy_0672 PF00512 His Kinase A (phospho-acceptor) domain Thicy_0672 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_0673 PF00158 Sigma-54 interaction domain Thicy_0673 PF00072 Response regulator receiver domain Thicy_0673 PF02954 Bacterial regulatory protein, Fis family Thicy_0674 PF00543 Nitrogen regulatory protein P-II Thicy_0675 PF02666 Phosphatidylserine decarboxylase Thicy_0676 PF00764 Arginosuccinate synthase Thicy_0677 PF04608 Phosphatidylglycerophosphatase A Thicy_0679 PF00375 Sodium:dicarboxylate symporter family Thicy_0680 PF00149 Calcineurin-like phosphoesterase Thicy_0681 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Thicy_0682 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Thicy_0683 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Thicy_0683 PF00749 tRNA synthetases class I (E and Q), catalytic domain Thicy_0684 PF09190 DALR domain Thicy_0684 PF01406 tRNA synthetases class I (C) catalytic domain Thicy_0685 PF14718 Soluble lytic murein transglycosylase L domain Thicy_0685 PF01464 Transglycosylase SLT domain Thicy_0686 PF01476 LysM domain Thicy_0686 PF01464 Transglycosylase SLT domain Thicy_0689 PF00075 RNase H Thicy_0691 PF13525 Outer membrane lipoprotein Thicy_0692 PF01479 S4 domain Thicy_0692 PF00849 RNA pseudouridylate synthase Thicy_0694 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Thicy_0694 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Thicy_0695 PF01510 N-acetylmuramoyl-L-alanine amidase Thicy_0696 PF00258 Flavodoxin Thicy_0698 PF00293 NUDIX domain Thicy_0699 PF00456 Transketolase, thiamine diphosphate binding domain Thicy_0699 PF17831 Pyruvate dehydrogenase E1 component middle domain Thicy_0700 PF00364 Biotin-requiring enzyme Thicy_0700 PF02817 e3 binding domain Thicy_0700 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Thicy_0701 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thicy_0701 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0702 PF00849 RNA pseudouridylate synthase Thicy_0703 PF03692 Putative zinc- or iron-chelating domain Thicy_0705 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Thicy_0705 PF18381 YcaO cyclodehydratase C-terminal domain Thicy_0707 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Thicy_0708 PF01171 PP-loop family Thicy_0708 PF11734 TilS substrate C-terminal domain Thicy_0709 PF06418 CTP synthase N-terminus Thicy_0709 PF00117 Glutamine amidotransferase class-I Thicy_0710 PF00793 DAHP synthetase I family Thicy_0711 PF03952 Enolase, N-terminal domain Thicy_0711 PF00113 Enolase, C-terminal TIM barrel domain Thicy_0712 PF04977 Septum formation initiator Thicy_0714 PF01975 Survival protein SurE Thicy_0716 PF09335 SNARE associated Golgi protein Thicy_0717 PF04430 Protein of unknown function (DUF498/DUF598) Thicy_0718 PF00155 Aminotransferase class I and II Thicy_0719 PF00742 Homoserine dehydrogenase Thicy_0719 PF03447 Homoserine dehydrogenase, NAD binding domain Thicy_0719 PF01842 ACT domain Thicy_0721 PF00291 Pyridoxal-phosphate dependent enzyme Thicy_0722 PF01368 DHH family Thicy_0722 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Thicy_0722 PF17768 RecJ OB domain Thicy_0722 PF02272 DHHA1 domain Thicy_0724 PF00749 tRNA synthetases class I (E and Q), catalytic domain Thicy_0725 PF01258 Prokaryotic dksA/traR C4-type zinc finger Thicy_0726 PF13419 Haloacid dehalogenase-like hydrolase Thicy_0727 PF05698 Bacterial trigger factor protein (TF) C-terminus Thicy_0729 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thicy_0730 PF02463 RecF/RecN/SMC N terminal domain Thicy_0730 PF06470 SMC proteins Flexible Hinge Domain Thicy_0732 PF01653 NAD-dependent DNA ligase adenylation domain Thicy_0732 PF00533 BRCA1 C Terminus (BRCT) domain Thicy_0732 PF03120 NAD-dependent DNA ligase OB-fold domain Thicy_0732 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Thicy_0732 PF12826 Helix-hairpin-helix motif Thicy_0733 PF04751 Protein of unknown function (DUF615) Thicy_0736 PF17763 Glutaminase/Asparaginase C-terminal domain Thicy_0736 PF00710 Asparaginase, N-terminal Thicy_0737 PF00717 Peptidase S24-like Thicy_0737 PF01726 LexA DNA binding domain Thicy_0738 PF03795 YCII-related domain Thicy_0739 PF04279 Intracellular septation protein A Thicy_0740 PF02811 PHP domain Thicy_0741 PF01300 Telomere recombination Thicy_0742 PF02163 Peptidase family M50 Thicy_0743 PF02616 Segregation and condensation protein ScpA Thicy_0744 PF04079 Segregation and condensation complex subunit ScpB Thicy_0745 PF00849 RNA pseudouridylate synthase Thicy_0745 PF01479 S4 domain Thicy_0748 PF00291 Pyridoxal-phosphate dependent enzyme Thicy_0753 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Thicy_0753 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Thicy_0754 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Thicy_0754 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Thicy_0755 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Thicy_0757 PF02824 TGS domain Thicy_0757 PF04607 Region found in RelA / SpoT proteins Thicy_0757 PF13291 ACT domain Thicy_0759 PF06965 Na+/H+ antiporter 1 Thicy_0759 PF01343 Peptidase family S49 Thicy_0760 PF08459 UvrC Helix-hairpin-helix N-terminal Thicy_0760 PF02151 UvrB/uvrC motif Thicy_0760 PF12826 Helix-hairpin-helix motif Thicy_0760 PF01541 GIY-YIG catalytic domain Thicy_0763 PF01066 CDP-alcohol phosphatidyltransferase Thicy_0764 PF13356 Arm DNA-binding domain Thicy_0764 PF00589 Phage integrase family Thicy_0776 PF02810 SEC-C motif Thicy_0777 PF08376 Nitrate and nitrite sensing Thicy_0777 PF03861 ANTAR domain Thicy_0779 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_0780 PF00005 ABC transporter Thicy_0781 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Thicy_0781 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Thicy_0781 PF04324 BFD-like [2Fe-2S] binding domain Thicy_0781 PF18267 Rubredoxin NAD+ reductase C-terminal domain Thicy_0781 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0782 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Thicy_0782 PF04324 BFD-like [2Fe-2S] binding domain Thicy_0782 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0782 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Thicy_0782 PF18267 Rubredoxin NAD+ reductase C-terminal domain Thicy_0784 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Thicy_0784 PF04324 BFD-like [2Fe-2S] binding domain Thicy_0784 PF01568 Molydopterin dinucleotide binding domain Thicy_0784 PF00384 Molybdopterin oxidoreductase Thicy_0785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thicy_0785 PF14824 Sirohaem biosynthesis protein central Thicy_0785 PF10414 Sirohaem synthase dimerisation region Thicy_0786 PF02885 Glycosyl transferase family, helical bundle domain Thicy_0786 PF00591 Glycosyl transferase family, a/b domain Thicy_0787 PF03453 MoeA N-terminal region (domain I and II) Thicy_0787 PF03454 MoeA C-terminal region (domain IV) Thicy_0787 PF00994 Probable molybdopterin binding domain Thicy_0788 PF12804 MobA-like NTP transferase domain Thicy_0789 PF00667 FAD binding domain Thicy_0789 PF00175 Oxidoreductase NAD-binding domain Thicy_0789 PF00258 Flavodoxin Thicy_0790 PF12706 Beta-lactamase superfamily domain Thicy_0790 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Thicy_0790 PF17770 Ribonuclease J C-terminal domain Thicy_0792 PF01207 Dihydrouridine synthase (Dus) Thicy_0793 PF02601 Exonuclease VII, large subunit Thicy_0793 PF13742 OB-fold nucleic acid binding domain Thicy_0793 PF02601 Exonuclease VII, large subunit Thicy_0793 PF13742 OB-fold nucleic acid binding domain Thicy_0796 PF00309 Sigma-54 factor, Activator interacting domain (AID) Thicy_0796 PF04963 Sigma-54 factor, core binding domain Thicy_0796 PF04552 Sigma-54, DNA binding domain Thicy_0798 PF00486 Transcriptional regulatory protein, C terminal Thicy_0798 PF00072 Response regulator receiver domain Thicy_0801 PF01554 MatE Thicy_0803 PF00293 NUDIX domain Thicy_0804 PF00842 Alanine racemase, C-terminal domain Thicy_0804 PF01168 Alanine racemase, N-terminal domain Thicy_0805 PF00772 DnaB-like helicase N terminal domain Thicy_0805 PF03796 DnaB-like helicase C terminal domain Thicy_0806 PF01281 Ribosomal protein L9, N-terminal domain Thicy_0806 PF03948 Ribosomal protein L9, C-terminal domain Thicy_0808 PF01084 Ribosomal protein S18 Thicy_0809 PF01250 Ribosomal protein S6 Thicy_0810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Thicy_0812 PF00216 Bacterial DNA-binding protein Thicy_0813 PF00575 S1 RNA binding domain Thicy_0814 PF02224 Cytidylate kinase Thicy_0815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thicy_0816 PF02153 Prephenate dehydrogenase Thicy_0817 PF00155 Aminotransferase class I and II Thicy_0818 PF01842 ACT domain Thicy_0818 PF01817 Chorismate mutase type II Thicy_0818 PF00800 Prephenate dehydratase Thicy_0819 PF00266 Aminotransferase class-V Thicy_0820 PF00521 DNA gyrase/topoisomerase IV, subunit A Thicy_0820 PF03989 DNA gyrase C-terminal domain, beta-propeller Thicy_0822 PF13419 Haloacid dehalogenase-like hydrolase Thicy_0826 PF16921 Tex protein YqgF-like domain Thicy_0826 PF17674 HHH domain Thicy_0826 PF00575 S1 RNA binding domain Thicy_0826 PF09371 Tex-like protein N-terminal domain Thicy_0827 PF01336 OB-fold nucleic acid binding domain Thicy_0827 PF00152 tRNA synthetases class II (D, K and N) Thicy_0832 PF01740 STAS domain Thicy_0832 PF00916 Sulfate permease family Thicy_0834 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Thicy_0834 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Thicy_0834 PF02769 AIR synthase related protein, C-terminal domain Thicy_0836 PF00701 Dihydrodipicolinate synthetase family Thicy_0837 PF00578 AhpC/TSA family Thicy_0838 PF13638 PIN domain Thicy_0838 PF02562 PhoH-like protein Thicy_0839 PF00717 Peptidase S24-like Thicy_0840 PF01541 GIY-YIG catalytic domain Thicy_0840 PF00929 Exonuclease Thicy_0841 PF13438 Domain of unknown function (DUF4113) Thicy_0841 PF11799 impB/mucB/samB family C-terminal domain Thicy_0841 PF00817 impB/mucB/samB family Thicy_0841 PF11798 IMS family HHH motif Thicy_0843 PF01132 Elongation factor P (EF-P) OB domain Thicy_0843 PF09285 Elongation factor P, C-terminal Thicy_0843 PF08207 Elongation factor P (EF-P) KOW-like domain Thicy_0845 PF12843 Putative quorum-sensing-regulated virulence factor Thicy_0849 PF01555 DNA methylase Thicy_0852 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thicy_0852 PF00005 ABC transporter Thicy_0854 PF12911 N-terminal TM domain of oligopeptide transport permease C Thicy_0854 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_0855 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_0858 PF08367 Peptidase M16C associated Thicy_0858 PF00675 Insulinase (Peptidase family M16) Thicy_0858 PF05193 Peptidase M16 inactive domain Thicy_0859 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Thicy_0859 PF01138 3' exoribonuclease family, domain 1 Thicy_0859 PF00575 S1 RNA binding domain Thicy_0859 PF03725 3' exoribonuclease family, domain 2 Thicy_0859 PF00013 KH domain Thicy_0860 PF00312 Ribosomal protein S15 Thicy_0862 PF03848 Tellurite resistance protein TehB Thicy_0863 PF09157 Pseudouridine synthase II TruB, C-terminal Thicy_0863 PF16198 tRNA pseudouridylate synthase B C-terminal domain Thicy_0863 PF01509 TruB family pseudouridylate synthase (N terminal domain) Thicy_0864 PF02033 Ribosome-binding factor A Thicy_0865 PF00009 Elongation factor Tu GTP binding domain Thicy_0865 PF04760 Translation initiation factor IF-2, N-terminal region Thicy_0865 PF08364 Bacterial translation initiation factor IF-2 associated region Thicy_0865 PF11987 Translation-initiation factor 2 Thicy_0866 PF08529 NusA N-terminal domain Thicy_0866 PF13184 NusA-like KH domain Thicy_0867 PF17384 RimP C-terminal SH3 domain Thicy_0867 PF02576 RimP N-terminal domain Thicy_0870 PF00474 Sodium:solute symporter family Thicy_0872 PF16177 Acetyl-coenzyme A synthetase N-terminus Thicy_0872 PF00501 AMP-binding enzyme Thicy_0872 PF13193 AMP-binding enzyme C-terminal domain Thicy_0873 PF07733 Bacterial DNA polymerase III alpha NTPase domain Thicy_0873 PF02811 PHP domain Thicy_0873 PF01336 OB-fold nucleic acid binding domain Thicy_0873 PF14579 Helix-hairpin-helix motif Thicy_0873 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Thicy_0874 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Thicy_0877 PF02910 Fumarate reductase flavoprotein C-term Thicy_0877 PF00890 FAD binding domain Thicy_0878 PF13085 2Fe-2S iron-sulfur cluster binding domain Thicy_0880 PF01176 Translation initiation factor 1A / IF-1 Thicy_0881 PF01648 4'-phosphopantetheinyl transferase superfamily Thicy_0882 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Thicy_0883 PF02565 Recombination protein O C terminal Thicy_0883 PF11967 Recombination protein O N terminal Thicy_0884 PF07650 KH domain Thicy_0884 PF01926 50S ribosome-binding GTPase Thicy_0885 PF00035 Double-stranded RNA binding motif Thicy_0885 PF14622 Ribonuclease-III-like Thicy_0886 PF10502 Signal peptidase, peptidase S26 Thicy_0887 PF00009 Elongation factor Tu GTP binding domain Thicy_0887 PF03144 Elongation factor Tu domain 2 Thicy_0887 PF06421 GTP-binding protein LepA C-terminus Thicy_0887 PF00679 Elongation factor G C-terminus Thicy_0888 PF13180 PDZ domain Thicy_0890 PF00890 FAD binding domain Thicy_0890 PF02910 Fumarate reductase flavoprotein C-term Thicy_0895 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Thicy_0901 PF01541 GIY-YIG catalytic domain Thicy_0902 PF01850 PIN domain Thicy_0904 PF01850 PIN domain Thicy_0905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Thicy_0906 PF16363 GDP-mannose 4,6 dehydratase Thicy_0907 PF02397 Bacterial sugar transferase Thicy_0908 PF01467 Cytidylyltransferase-like Thicy_0909 PF16363 GDP-mannose 4,6 dehydratase Thicy_0922 PF03328 HpcH/HpaI aldolase/citrate lyase family Thicy_0923 PF00682 HMGL-like Thicy_0923 PF07836 DmpG-like communication domain Thicy_0924 PF03009 Glycerophosphoryl diester phosphodiesterase family Thicy_0925 PF00535 Glycosyl transferase family 2 Thicy_0925 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Thicy_0927 PF01467 Cytidylyltransferase-like Thicy_0939 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Thicy_0943 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Thicy_0946 PF01370 NAD dependent epimerase/dehydratase family Thicy_0949 PF00664 ABC transporter transmembrane region Thicy_0949 PF00005 ABC transporter Thicy_0952 PF01926 50S ribosome-binding GTPase Thicy_0954 PF00582 Universal stress protein family Thicy_0955 PF00814 Glycoprotease family Thicy_0956 PF13307 Helicase C-terminal domain Thicy_0956 PF06733 DEAD_2 Thicy_0957 PF00444 Ribosomal protein L36 Thicy_0958 PF01351 Ribonuclease HII Thicy_0959 PF02684 Lipid-A-disaccharide synthetase Thicy_0960 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_0960 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Thicy_0961 PF07977 FabA-like domain Thicy_0962 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Thicy_0962 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_0963 PF03938 Outer membrane protein (OmpH-like) Thicy_0964 PF07244 Surface antigen variable number repeat Thicy_0964 PF01103 Surface antigen Thicy_0965 PF13180 PDZ domain Thicy_0965 PF17820 PDZ domain Thicy_0965 PF02163 Peptidase family M50 Thicy_0967 PF01255 Putative undecaprenyl diphosphate synthase Thicy_0968 PF01765 Ribosome recycling factor Thicy_0969 PF00696 Amino acid kinase family Thicy_0970 PF00889 Elongation factor TS Thicy_0971 PF00318 Ribosomal protein S2 Thicy_0972 PF00557 Metallopeptidase family M24 Thicy_0973 PF01966 HD domain Thicy_0973 PF08335 GlnD PII-uridylyltransferase Thicy_0973 PF01909 Nucleotidyltransferase domain Thicy_0976 PF16363 GDP-mannose 4,6 dehydratase Thicy_0977 PF04321 RmlD substrate binding domain Thicy_0978 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Thicy_0979 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thicy_0979 PF02403 Seryl-tRNA synthetase N-terminal domain Thicy_0980 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Thicy_0981 PF16193 AAA C-terminal domain Thicy_0981 PF12002 MgsA AAA+ ATPase C terminal Thicy_0981 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_0982 PF03548 Outer membrane lipoprotein carrier protein LolA Thicy_0983 PF01580 FtsK/SpoIIIE family Thicy_0983 PF09397 Ftsk gamma domain Thicy_0983 PF17854 FtsK alpha domain Thicy_0983 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Thicy_0984 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_0985 PF16658 Class II release factor RF3, C-terminal domain Thicy_0985 PF00009 Elongation factor Tu GTP binding domain Thicy_0985 PF03144 Elongation factor Tu domain 2 Thicy_0986 PF07549 SecD/SecF GG Motif Thicy_0986 PF02355 Protein export membrane protein Thicy_0987 PF02355 Protein export membrane protein Thicy_0987 PF13721 SecD export protein N-terminal TM region Thicy_0987 PF07549 SecD/SecF GG Motif Thicy_0988 PF02699 Preprotein translocase subunit Thicy_0989 PF01702 Queuine tRNA-ribosyltransferase Thicy_0990 PF02547 Queuosine biosynthesis protein Thicy_0999 PF03934 Type II secretion system (T2SS), protein K Thicy_1000 PF07963 Prokaryotic N-terminal methylation motif Thicy_1000 PF11612 Type II secretion system (T2SS), protein J Thicy_1003 PF08334 Type II secretion system (T2SS), protein G Thicy_1003 PF07963 Prokaryotic N-terminal methylation motif Thicy_1004 PF00482 Type II secretion system (T2SS), protein F Thicy_1005 PF00437 Type II/IV secretion system protein Thicy_1006 PF03958 Bacterial type II/III secretion system short domain Thicy_1006 PF00263 Bacterial type II and III secretion system protein Thicy_1007 PF11356 Type II secretion system protein C Thicy_1008 PF01625 Peptide methionine sulfoxide reductase Thicy_1010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Thicy_1011 PF01571 Aminomethyltransferase folate-binding domain Thicy_1014 PF06508 Queuosine biosynthesis protein QueC Thicy_1016 PF00691 OmpA family Thicy_1017 PF04052 TolB amino-terminal domain Thicy_1017 PF07676 WD40-like Beta Propeller Repeat Thicy_1019 PF02472 Biopolymer transport protein ExbD/TolR Thicy_1020 PF01618 MotA/TolQ/ExbB proton channel family Thicy_1021 PF05496 Holliday junction DNA helicase RuvB P-loop domain Thicy_1021 PF05491 RuvB C-terminal winged helix domain Thicy_1021 PF17864 RuvB AAA lid domain Thicy_1022 PF07499 RuvA, C-terminal domain Thicy_1022 PF01330 RuvA N terminal domain Thicy_1023 PF02075 Crossover junction endodeoxyribonuclease RuvC Thicy_1024 PF01709 Transcriptional regulator Thicy_1025 PF02445 Quinolinate synthetase A protein Thicy_1026 PF00152 tRNA synthetases class II (D, K and N) Thicy_1026 PF01336 OB-fold nucleic acid binding domain Thicy_1026 PF02938 GAD domain Thicy_1028 PF00106 short chain dehydrogenase Thicy_1029 PF00348 Polyprenyl synthetase Thicy_1030 PF01242 6-pyruvoyl tetrahydropterin synthase Thicy_1031 PF01478 Type IV leader peptidase family Thicy_1031 PF06750 Bacterial Peptidase A24 N-terminal domain Thicy_1033 PF00793 DAHP synthetase I family Thicy_1035 PF02769 AIR synthase related protein, C-terminal domain Thicy_1035 PF00586 AIR synthase related protein, N-terminal domain Thicy_1036 PF01029 NusB family Thicy_1037 PF00885 6,7-dimethyl-8-ribityllumazine synthase Thicy_1038 PF00925 GTP cyclohydrolase II Thicy_1038 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Thicy_1039 PF00677 Lumazine binding domain Thicy_1040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Thicy_1040 PF01872 RibD C-terminal domain Thicy_1041 PF03477 ATP cone domain Thicy_1042 PF00464 Serine hydroxymethyltransferase Thicy_1043 PF00005 ABC transporter Thicy_1043 PF12848 ABC transporter Thicy_1044 PF00990 Diguanylate cyclase, GGDEF domain Thicy_1046 PF00196 Bacterial regulatory proteins, luxR family Thicy_1046 PF00072 Response regulator receiver domain Thicy_1047 PF00206 Lyase Thicy_1047 PF10415 Fumarase C C-terminus Thicy_1048 PF00085 Thioredoxin Thicy_1049 PF00480 ROK family Thicy_1050 PF04305 Protein of unknown function (DUF455) Thicy_1052 PF01272 Transcription elongation factor, GreA/GreB, C-term Thicy_1052 PF03449 Transcription elongation factor, N-terminal Thicy_1053 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Thicy_1053 PF02142 MGS-like domain Thicy_1053 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Thicy_1054 PF00117 Glutamine amidotransferase class-I Thicy_1054 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Thicy_1055 PF05173 Dihydrodipicolinate reductase, C-terminus Thicy_1055 PF01113 Dihydrodipicolinate reductase, N-terminus Thicy_1056 PF01556 DnaJ C terminal domain Thicy_1056 PF00226 DnaJ domain Thicy_1056 PF00684 DnaJ central domain Thicy_1057 PF00012 Hsp70 protein Thicy_1058 PF01025 GrpE Thicy_1059 PF01513 ATP-NAD kinase Thicy_1060 PF02463 RecF/RecN/SMC N terminal domain Thicy_1061 PF01475 Ferric uptake regulator family Thicy_1062 PF04355 SmpA / OmlA family Thicy_1063 PF03658 RnfH family Ubiquitin Thicy_1064 PF03364 Polyketide cyclase / dehydrase and lipid transport Thicy_1065 PF01668 SmpB protein Thicy_1066 PF13472 GDSL-like Lipase/Acylhydrolase family Thicy_1067 PF00005 ABC transporter Thicy_1069 PF00291 Pyridoxal-phosphate dependent enzyme Thicy_1069 PF00585 C-terminal regulatory domain of Threonine dehydratase Thicy_1071 PF02630 SCO1/SenC Thicy_1073 PF01784 NIF3 (NGG1p interacting factor 3) Thicy_1076 PF00005 ABC transporter Thicy_1076 PF12848 ABC transporter Thicy_1077 PF00005 ABC transporter Thicy_1078 PF02687 FtsX-like permease family Thicy_1078 PF12704 MacB-like periplasmic core domain Thicy_1079 PF03458 UPF0126 domain Thicy_1080 PF02559 CarD-like/TRCF domain Thicy_1080 PF00270 DEAD/DEAH box helicase Thicy_1080 PF03461 TRCF domain Thicy_1080 PF17757 UvrB interaction domain Thicy_1080 PF00271 Helicase conserved C-terminal domain Thicy_1082 PF03776 Septum formation topological specificity factor MinE Thicy_1083 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Thicy_1085 PF05728 Uncharacterised protein family (UPF0227) Thicy_1087 PF02348 Cytidylyltransferase Thicy_1088 PF03966 Trm112p-like protein Thicy_1089 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Thicy_1090 PF02254 TrkA-N domain Thicy_1090 PF00999 Sodium/hydrogen exchanger family Thicy_1090 PF02080 TrkA-C domain Thicy_1091 PF00690 Cation transporter/ATPase, N-terminus Thicy_1091 PF00689 Cation transporting ATPase, C-terminus Thicy_1092 PF07556 Protein of unknown function (DUF1538) Thicy_1095 PF00753 Metallo-beta-lactamase superfamily Thicy_1095 PF03772 Competence protein Thicy_1097 PF13654 AAA domain Thicy_1097 PF05362 Lon protease (S16) C-terminal proteolytic domain Thicy_1098 PF00291 Pyridoxal-phosphate dependent enzyme Thicy_1099 PF00581 Rhodanese-like domain Thicy_1100 PF05860 haemagglutination activity domain Thicy_1102 PF07724 AAA domain (Cdc48 subfamily) Thicy_1102 PF10431 C-terminal, D2-small domain, of ClpB protein Thicy_1102 PF17871 AAA lid domain Thicy_1102 PF02861 Clp amino terminal domain, pathogenicity island component Thicy_1102 PF00004 ATPase family associated with various cellular activities (AAA) Thicy_1103 PF02617 ATP-dependent Clp protease adaptor protein ClpS Thicy_1104 PF00849 RNA pseudouridylate synthase Thicy_1106 PF04356 Protein of unknown function (DUF489) Thicy_1107 PF02798 Glutathione S-transferase, N-terminal domain Thicy_1107 PF00043 Glutathione S-transferase, C-terminal domain Thicy_1108 PF12838 4Fe-4S dicluster domain Thicy_1111 PF18693 TRAM domain Thicy_1111 PF00919 Uncharacterized protein family UPF0004 Thicy_1111 PF04055 Radical SAM superfamily Thicy_1113 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Thicy_1114 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_1114 PF14602 Hexapeptide repeat of succinyl-transferase Thicy_1114 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Thicy_1115 PF03960 ArsC family Thicy_1116 PF01546 Peptidase family M20/M25/M40 Thicy_1116 PF07687 Peptidase dimerisation domain Thicy_1119 PF00209 Sodium:neurotransmitter symporter family Thicy_1120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Thicy_1120 PF01565 FAD binding domain Thicy_1121 PF00933 Glycosyl hydrolase family 3 N terminal domain Thicy_1122 PF12911 N-terminal TM domain of oligopeptide transport permease C Thicy_1122 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_1123 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_1125 PF02540 NAD synthase Thicy_1125 PF00795 Carbon-nitrogen hydrolase Thicy_1126 PF02629 CoA binding domain Thicy_1126 PF00549 CoA-ligase Thicy_1127 PF00549 CoA-ligase Thicy_1127 PF08442 ATP-grasp domain Thicy_1129 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thicy_1134 PF00005 ABC transporter Thicy_1134 PF00664 ABC transporter transmembrane region Thicy_1135 PF01026 TatD related DNase Thicy_1136 PF09115 DNA polymerase III, delta subunit, C terminal Thicy_1137 PF02223 Thymidylate kinase Thicy_1138 PF02618 YceG-like family Thicy_1139 PF01063 Amino-transferase class IV Thicy_1140 PF00425 chorismate binding enzyme Thicy_1140 PF04715 Anthranilate synthase component I, N terminal region Thicy_1141 PF00109 Beta-ketoacyl synthase, N-terminal domain Thicy_1141 PF02801 Beta-ketoacyl synthase, C-terminal domain Thicy_1142 PF00550 Phosphopantetheine attachment site Thicy_1144 PF00698 Acyl transferase domain Thicy_1145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Thicy_1145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thicy_1146 PF02504 Fatty acid synthesis protein Thicy_1147 PF01783 Ribosomal L32p protein family Thicy_1148 PF02620 Large ribosomal RNA subunit accumulation protein YceD Thicy_1149 PF02545 Maf-like protein Thicy_1150 PF13419 Haloacid dehalogenase-like hydrolase Thicy_1151 PF01479 S4 domain Thicy_1151 PF00849 RNA pseudouridylate synthase Thicy_1152 PF10150 Ribonuclease E/G family Thicy_1152 PF12111 Polyribonucleotide phosphorylase C terminal Thicy_1152 PF00575 S1 RNA binding domain Thicy_1155 PF03466 LysR substrate binding domain Thicy_1155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_1156 PF01494 FAD binding domain Thicy_1157 PF01494 FAD binding domain Thicy_1158 PF05195 Aminopeptidase P, N-terminal domain Thicy_1158 PF00557 Metallopeptidase family M24 Thicy_1163 PF01812 5-formyltetrahydrofolate cyclo-ligase family Thicy_1167 PF00482 Type II secretion system (T2SS), protein F Thicy_1168 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Thicy_1168 PF00437 Type II/IV secretion system protein Thicy_1170 PF06969 HemN C-terminal domain Thicy_1170 PF04055 Radical SAM superfamily Thicy_1171 PF01170 Putative RNA methylase family UPF0020 Thicy_1171 PF10672 S-adenosylmethionine-dependent methyltransferase Thicy_1171 PF02926 THUMP domain Thicy_1172 PF13406 Transglycosylase SLT domain Thicy_1173 PF00529 HlyD membrane-fusion protein of T1SS Thicy_1173 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Thicy_1174 PF00873 AcrB/AcrD/AcrF family Thicy_1175 PF01252 Signal peptidase (SPase) II Thicy_1176 PF00133 tRNA synthetases class I (I, L, M and V) Thicy_1176 PF08264 Anticodon-binding domain of tRNA Thicy_1176 PF06827 Zinc finger found in FPG and IleRS Thicy_1177 PF06574 FAD synthetase Thicy_1177 PF01687 Riboflavin kinase Thicy_1178 PF03023 Lipid II flippase MurJ Thicy_1179 PF00205 Thiamine pyrophosphate enzyme, central domain Thicy_1179 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Thicy_1179 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Thicy_1181 PF00986 DNA gyrase B subunit, carboxyl terminus Thicy_1181 PF01751 Toprim domain Thicy_1181 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1181 PF00204 DNA gyrase B Thicy_1182 PF01243 Pyridoxamine 5'-phosphate oxidase Thicy_1182 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Thicy_1183 PF03167 Uracil DNA glycosylase superfamily Thicy_1186 PF05746 DALR anticodon binding domain Thicy_1186 PF02092 Glycyl-tRNA synthetase beta subunit Thicy_1187 PF02091 Glycyl-tRNA synthetase alpha subunit Thicy_1189 PF04225 Opacity-associated protein A LysM-like domain Thicy_1189 PF01551 Peptidase family M23 Thicy_1190 PF03702 Anhydro-N-acetylmuramic acid kinase Thicy_1192 PF03459 TOBE domain Thicy_1192 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_1193 PF00317 Ribonucleotide reductase, all-alpha domain Thicy_1193 PF02867 Ribonucleotide reductase, barrel domain Thicy_1193 PF03477 ATP cone domain Thicy_1194 PF00268 Ribonucleotide reductase, small chain Thicy_1195 PF08281 Sigma-70, region 4 Thicy_1195 PF04542 Sigma-70 region 2 Thicy_1200 PF01145 SPFH domain / Band 7 family Thicy_1200 PF16200 C-terminal region of band_7 Thicy_1209 PF17863 AAA lid domain Thicy_1209 PF07726 ATPase family associated with various cellular activities (AAA) Thicy_1214 PF00271 Helicase conserved C-terminal domain Thicy_1214 PF00270 DEAD/DEAH box helicase Thicy_1214 PF03880 DbpA RNA binding domain Thicy_1220 PF00581 Rhodanese-like domain Thicy_1220 PF00753 Metallo-beta-lactamase superfamily Thicy_1223 PF07995 Glucose / Sorbosone dehydrogenase Thicy_1224 PF00361 Proton-conducting membrane transporter Thicy_1225 PF00361 Proton-conducting membrane transporter Thicy_1226 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Thicy_1231 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Thicy_1232 PF01384 Phosphate transporter family Thicy_1233 PF00294 pfkB family carbohydrate kinase Thicy_1234 PF00588 SpoU rRNA Methylase family Thicy_1234 PF08032 RNA 2'-O ribose methyltransferase substrate binding Thicy_1235 PF00575 S1 RNA binding domain Thicy_1235 PF08461 Ribonuclease R winged-helix domain Thicy_1235 PF08206 Ribonuclease B OB domain Thicy_1235 PF00773 RNB domain Thicy_1235 PF17876 Cold shock domain Thicy_1236 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thicy_1236 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thicy_1237 PF01464 Transglycosylase SLT domain Thicy_1237 PF00497 Bacterial extracellular solute-binding proteins, family 3 Thicy_1238 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Thicy_1239 PF00719 Inorganic pyrophosphatase Thicy_1240 PF00311 Phosphoenolpyruvate carboxylase Thicy_1241 PF02261 Aspartate decarboxylase Thicy_1242 PF02569 Pantoate-beta-alanine ligase Thicy_1243 PF02548 Ketopantoate hydroxymethyltransferase Thicy_1244 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Thicy_1245 PF12626 Polymerase A arginine-rich C-terminus Thicy_1245 PF12627 Probable RNA and SrmB- binding site of polymerase A Thicy_1245 PF01743 Poly A polymerase head domain Thicy_1246 PF02657 Fe-S metabolism associated domain Thicy_1247 PF01435 Peptidase family M48 Thicy_1248 PF02934 GatB/GatE catalytic domain Thicy_1248 PF02637 GatB domain Thicy_1249 PF01425 Amidase Thicy_1250 PF02686 Glu-tRNAGln amidotransferase C subunit Thicy_1253 PF04093 rod shape-determining protein MreD Thicy_1254 PF00905 Penicillin binding protein transpeptidase domain Thicy_1254 PF03717 Penicillin-binding Protein dimerisation domain Thicy_1255 PF01098 Cell cycle protein Thicy_1256 PF00768 D-alanyl-D-alanine carboxypeptidase Thicy_1256 PF07943 Penicillin-binding protein 5, C-terminal domain Thicy_1257 PF01063 Amino-transferase class IV Thicy_1258 PF04359 Protein of unknown function (DUF493) Thicy_1259 PF03099 Biotin/lipoate A/B protein ligase family Thicy_1260 PF04055 Radical SAM superfamily Thicy_1260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Thicy_1261 PF01430 Hsp33 protein Thicy_1262 PF03883 Peroxide stress protein YaaA Thicy_1264 PF00483 Nucleotidyl transferase Thicy_1265 PF01636 Phosphotransferase enzyme family Thicy_1266 PF04453 LPS transport system D Thicy_1267 PF09312 SurA N-terminal domain Thicy_1267 PF00639 PPIC-type PPIASE domain Thicy_1267 PF09312 SurA N-terminal domain Thicy_1267 PF00639 PPIC-type PPIASE domain Thicy_1268 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Thicy_1269 PF00398 Ribosomal RNA adenine dimethylase Thicy_1270 PF00149 Calcineurin-like phosphoesterase Thicy_1272 PF01722 BolA-like protein Thicy_1277 PF00120 Glutamine synthetase, catalytic domain Thicy_1277 PF03951 Glutamine synthetase, beta-Grasp domain Thicy_1278 PF00795 Carbon-nitrogen hydrolase Thicy_1279 PF00571 CBS domain Thicy_1279 PF03471 Transporter associated domain Thicy_1280 PF02130 Uncharacterized protein family UPF0054 Thicy_1281 PF02562 PhoH-like protein Thicy_1282 PF00919 Uncharacterized protein family UPF0004 Thicy_1282 PF01938 TRAM domain Thicy_1282 PF04055 Radical SAM superfamily Thicy_1283 PF00391 PEP-utilising enzyme, mobile domain Thicy_1283 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Thicy_1283 PF02896 PEP-utilising enzyme, TIM barrel domain Thicy_1284 PF00924 Mechanosensitive ion channel Thicy_1286 PF00578 AhpC/TSA family Thicy_1287 PF00216 Bacterial DNA-binding protein Thicy_1290 PF00875 DNA photolyase Thicy_1290 PF03441 FAD binding domain of DNA photolyase Thicy_1294 PF03109 ABC1 family Thicy_1296 PF02581 Thiamine monophosphate synthase Thicy_1297 PF08543 Phosphomethylpyrimidine kinase Thicy_1298 PF01842 ACT domain Thicy_1298 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thicy_1298 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thicy_1299 PF01565 FAD binding domain Thicy_1299 PF02913 FAD linked oxidases, C-terminal domain Thicy_1301 PF07715 TonB-dependent Receptor Plug Domain Thicy_1306 PF01063 Amino-transferase class IV Thicy_1307 PF00202 Aminotransferase class-III Thicy_1308 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Thicy_1308 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Thicy_1309 PF02132 RecR protein Thicy_1309 PF13662 Toprim domain Thicy_1310 PF02575 YbaB/EbfC DNA-binding family Thicy_1311 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Thicy_1311 PF12170 DNA polymerase III tau subunit V interacting with alpha Thicy_1311 PF12169 DNA polymerase III subunits gamma and tau domain III Thicy_1312 PF00343 Carbohydrate phosphorylase Thicy_1313 PF08323 Starch synthase catalytic domain Thicy_1313 PF00534 Glycosyl transferases group 1 Thicy_1314 PF02806 Alpha amylase, C-terminal all-beta domain Thicy_1314 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Thicy_1314 PF00128 Alpha amylase, catalytic domain Thicy_1315 PF02446 4-alpha-glucanotransferase Thicy_1317 PF00483 Nucleotidyl transferase Thicy_1319 PF13580 SIS domain Thicy_1320 PF00294 pfkB family carbohydrate kinase Thicy_1320 PF01467 Cytidylyltransferase-like Thicy_1322 PF00571 CBS domain Thicy_1322 PF01380 SIS domain Thicy_1323 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Thicy_1327 PF02652 L-lactate permease Thicy_1328 PF00731 AIR carboxylase Thicy_1329 PF02222 ATP-grasp domain Thicy_1329 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Thicy_1332 PF02773 S-adenosylmethionine synthetase, C-terminal domain Thicy_1332 PF00438 S-adenosylmethionine synthetase, N-terminal domain Thicy_1332 PF02772 S-adenosylmethionine synthetase, central domain Thicy_1333 PF02219 Methylenetetrahydrofolate reductase Thicy_1334 PF04452 RNA methyltransferase Thicy_1336 PF00072 Response regulator receiver domain Thicy_1336 PF00486 Transcriptional regulatory protein, C terminal Thicy_1337 PF07689 KaiB domain Thicy_1337 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1337 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1339 PF03631 Virulence factor BrkB Thicy_1340 PF13180 PDZ domain Thicy_1340 PF03572 Peptidase family S41 Thicy_1342 PF04101 Glycosyltransferase family 28 C-terminal domain Thicy_1342 PF03033 Glycosyltransferase family 28 N-terminal domain Thicy_1343 PF01098 Cell cycle protein Thicy_1344 PF08245 Mur ligase middle domain Thicy_1344 PF02875 Mur ligase family, glutamate ligase domain Thicy_1345 PF00953 Glycosyl transferase family 4 Thicy_1346 PF08245 Mur ligase middle domain Thicy_1346 PF01225 Mur ligase family, catalytic domain Thicy_1346 PF02875 Mur ligase family, glutamate ligase domain Thicy_1347 PF02875 Mur ligase family, glutamate ligase domain Thicy_1347 PF08245 Mur ligase middle domain Thicy_1347 PF01225 Mur ligase family, catalytic domain Thicy_1348 PF00905 Penicillin binding protein transpeptidase domain Thicy_1348 PF03717 Penicillin-binding Protein dimerisation domain Thicy_1350 PF00091 Tubulin/FtsZ family, GTPase domain Thicy_1350 PF12327 FtsZ family, C-terminal domain Thicy_1351 PF01795 MraW methylase family Thicy_1352 PF02381 MraZ protein, putative antitoxin-like Thicy_1353 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thicy_1355 PF02021 Uncharacterised protein family UPF0102 Thicy_1356 PF00210 Ferritin-like domain Thicy_1357 PF04539 Sigma-70 region 3 Thicy_1357 PF04542 Sigma-70 region 2 Thicy_1357 PF04545 Sigma-70, region 4 Thicy_1357 PF04546 Sigma-70, non-essential region Thicy_1357 PF03979 Sigma-70 factor, region 1.1 Thicy_1357 PF00140 Sigma-70 factor, region 1.2 Thicy_1358 PF01807 CHC2 zinc finger Thicy_1358 PF08278 DNA primase DnaG DnaB-binding Thicy_1358 PF08275 DNA primase catalytic core, N-terminal domain Thicy_1358 PF10410 DnaB-helicase binding domain of primase Thicy_1359 PF09424 Yqey-like protein Thicy_1360 PF01165 Ribosomal protein S21 Thicy_1361 PF00814 Glycoprotease family Thicy_1362 PF02660 Glycerol-3-phosphate acyltransferase Thicy_1363 PF02152 Dihydroneopterin aldolase Thicy_1365 PF02673 Bacitracin resistance protein BacA Thicy_1367 PF01769 Divalent cation transporter Thicy_1367 PF03448 MgtE intracellular N domain Thicy_1367 PF00571 CBS domain Thicy_1370 PF08463 EcoEI R protein C-terminal Thicy_1370 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) Thicy_1370 PF04851 Type III restriction enzyme, res subunit Thicy_1370 PF00271 Helicase conserved C-terminal domain Thicy_1374 PF12161 HsdM N-terminal domain Thicy_1374 PF02384 N-6 DNA Methylase Thicy_1375 PF06071 Protein of unknown function (DUF933) Thicy_1375 PF01926 50S ribosome-binding GTPase Thicy_1376 PF01195 Peptidyl-tRNA hydrolase Thicy_1377 PF14693 Ribosomal protein TL5, C-terminal domain Thicy_1377 PF01386 Ribosomal L25p family Thicy_1378 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Thicy_1378 PF14572 Phosphoribosyl synthetase-associated domain Thicy_1379 PF01649 Ribosomal protein S20 Thicy_1380 PF02590 Predicted SPOUT methyltransferase Thicy_1382 PF01467 Cytidylyltransferase-like Thicy_1383 PF00171 Aldehyde dehydrogenase family Thicy_1389 PF13603 Leucyl-tRNA synthetase, Domain 2 Thicy_1389 PF00133 tRNA synthetases class I (I, L, M and V) Thicy_1389 PF08264 Anticodon-binding domain of tRNA Thicy_1392 PF03710 Glutamate-ammonia ligase adenylyltransferase Thicy_1392 PF08335 GlnD PII-uridylyltransferase Thicy_1393 PF00543 Nitrogen regulatory protein P-II Thicy_1394 PF00909 Ammonium Transporter Family Thicy_1397 PF00133 tRNA synthetases class I (I, L, M and V) Thicy_1397 PF10458 Valyl tRNA synthetase tRNA binding arm Thicy_1397 PF08264 Anticodon-binding domain of tRNA Thicy_1400 PF00589 Phage integrase family Thicy_1400 PF02899 Phage integrase, N-terminal SAM-like domain Thicy_1401 PF00873 AcrB/AcrD/AcrF family Thicy_1402 PF00529 HlyD membrane-fusion protein of T1SS Thicy_1402 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Thicy_1404 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Thicy_1405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thicy_1405 PF11890 Domain of unknown function (DUF3410) Thicy_1405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thicy_1410 PF01070 FMN-dependent dehydrogenase Thicy_1411 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal Thicy_1411 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thicy_1415 PF04386 Stringent starvation protein B Thicy_1416 PF02798 Glutathione S-transferase, N-terminal domain Thicy_1416 PF00043 Glutathione S-transferase, C-terminal domain Thicy_1417 PF04138 GtrA-like protein Thicy_1418 PF00535 Glycosyl transferase family 2 Thicy_1419 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Thicy_1422 PF13411 MerR HTH family regulatory protein Thicy_1423 PF00216 Bacterial DNA-binding protein Thicy_1424 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Thicy_1424 PF03483 B3/4 domain Thicy_1424 PF03484 tRNA synthetase B5 domain Thicy_1424 PF03147 Ferredoxin-fold anticodon binding domain Thicy_1424 PF01588 Putative tRNA binding domain Thicy_1425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Thicy_1425 PF01409 tRNA synthetases class II core domain (F) Thicy_1426 PF00453 Ribosomal protein L20 Thicy_1427 PF01632 Ribosomal protein L35 Thicy_1428 PF00707 Translation initiation factor IF-3, C-terminal domain Thicy_1428 PF05198 Translation initiation factor IF-3, N-terminal domain Thicy_1429 PF02824 TGS domain Thicy_1429 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Thicy_1429 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thicy_1429 PF03129 Anticodon binding domain Thicy_1431 PF03739 Lipopolysaccharide export system permease LptF/LptG Thicy_1433 PF00883 Cytosol aminopeptidase family, catalytic domain Thicy_1433 PF02789 Cytosol aminopeptidase family, N-terminal domain Thicy_1435 PF00196 Bacterial regulatory proteins, luxR family Thicy_1435 PF00072 Response regulator receiver domain Thicy_1436 PF04851 Type III restriction enzyme, res subunit Thicy_1436 PF02151 UvrB/uvrC motif Thicy_1436 PF12344 Ultra-violet resistance protein B Thicy_1436 PF17757 UvrB interaction domain Thicy_1436 PF00271 Helicase conserved C-terminal domain Thicy_1439 PF05958 tRNA (Uracil-5-)-methyltransferase Thicy_1439 PF01938 TRAM domain Thicy_1440 PF00873 AcrB/AcrD/AcrF family Thicy_1441 PF13533 Biotin-lipoyl like Thicy_1442 PF00762 Ferrochelatase Thicy_1443 PF17764 3′ DNA-binding domain (3′BD) Thicy_1443 PF00271 Helicase conserved C-terminal domain Thicy_1443 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Thicy_1443 PF18074 Primosomal protein N C-terminal domain Thicy_1443 PF00270 DEAD/DEAH box helicase Thicy_1444 PF17287 POTRA domain Thicy_1444 PF08479 POTRA domain, ShlB-type Thicy_1444 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Thicy_1445 PF12951 Passenger-associated-transport-repeat Thicy_1446 PF12833 Helix-turn-helix domain Thicy_1446 PF07883 Cupin domain Thicy_1448 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Thicy_1450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Thicy_1450 PF01276 Orn/Lys/Arg decarboxylase, major domain Thicy_1450 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Thicy_1451 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1451 PF00672 HAMP domain Thicy_1451 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1452 PF00486 Transcriptional regulatory protein, C terminal Thicy_1452 PF00072 Response regulator receiver domain Thicy_1455 PF00440 Bacterial regulatory proteins, tetR family Thicy_1456 PF00271 Helicase conserved C-terminal domain Thicy_1456 PF00270 DEAD/DEAH box helicase Thicy_1456 PF03880 DbpA RNA binding domain Thicy_1457 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thicy_1457 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thicy_1458 PF03480 Bacterial extracellular solute-binding protein, family 7 Thicy_1461 PF00873 AcrB/AcrD/AcrF family Thicy_1462 PF07715 TonB-dependent Receptor Plug Domain Thicy_1462 PF00593 TonB dependent receptor Thicy_1463 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Thicy_1463 PF13244 Domain of unknown function (DUF4040) Thicy_1463 PF00361 Proton-conducting membrane transporter Thicy_1463 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Thicy_1464 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Thicy_1465 PF00361 Proton-conducting membrane transporter Thicy_1467 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Thicy_1468 PF03334 Na+/H+ antiporter subunit Thicy_1470 PF01502 Phosphoribosyl-AMP cyclohydrolase Thicy_1471 PF00226 DnaJ domain Thicy_1471 PF01556 DnaJ C terminal domain Thicy_1472 PF03641 Possible lysine decarboxylase Thicy_1472 PF11892 Domain of unknown function (DUF3412) Thicy_1472 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Thicy_1473 PF00271 Helicase conserved C-terminal domain Thicy_1473 PF00270 DEAD/DEAH box helicase Thicy_1474 PF09820 Predicted AAA-ATPase Thicy_1474 PF08011 PD-(D/E)XK nuclease superfamily Thicy_1477 PF00072 Response regulator receiver domain Thicy_1477 PF00486 Transcriptional regulatory protein, C terminal Thicy_1478 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1478 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1478 PF00672 HAMP domain Thicy_1479 PF01142 tRNA pseudouridine synthase D (TruD) Thicy_1481 PF00465 Iron-containing alcohol dehydrogenase Thicy_1482 PF00580 UvrD/REP helicase N-terminal domain Thicy_1482 PF13361 UvrD-like helicase C-terminal domain Thicy_1484 PF12102 Domain of unknown function (DUF3578) Thicy_1484 PF07728 AAA domain (dynein-related subfamily) Thicy_1489 PF01053 Cys/Met metabolism PLP-dependent enzyme Thicy_1491 PF05175 Methyltransferase small domain Thicy_1500 PF03692 Putative zinc- or iron-chelating domain Thicy_1504 PF15461 Beta-carotene 15,15'-dioxygenase Thicy_1508 PF00348 Polyprenyl synthetase Thicy_1509 PF01036 Bacteriorhodopsin-like protein Thicy_1511 PF01078 Magnesium chelatase, subunit ChlI Thicy_1511 PF13335 Magnesium chelatase, subunit ChlI C-terminal Thicy_1512 PF04380 Membrane fusogenic activity Thicy_1514 PF05746 DALR anticodon binding domain Thicy_1514 PF03485 Arginyl tRNA synthetase N terminal domain Thicy_1514 PF00750 tRNA synthetases class I (R) Thicy_1515 PF01131 DNA topoisomerase Thicy_1515 PF01751 Toprim domain Thicy_1515 PF13368 Topoisomerase C-terminal repeat Thicy_1518 PF17782 DprA winged helix domain Thicy_1518 PF02481 DNA recombination-mediator protein A Thicy_1519 PF01327 Polypeptide deformylase Thicy_1520 PF02911 Formyl transferase, C-terminal domain Thicy_1520 PF00551 Formyl transferase Thicy_1521 PF01029 NusB family Thicy_1521 PF01189 16S rRNA methyltransferase RsmB/F Thicy_1523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1523 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1523 PF00989 PAS fold Thicy_1523 PF00672 HAMP domain Thicy_1524 PF00158 Sigma-54 interaction domain Thicy_1524 PF00072 Response regulator receiver domain Thicy_1524 PF02954 Bacterial regulatory protein, Fis family Thicy_1525 PF02254 TrkA-N domain Thicy_1525 PF02080 TrkA-C domain Thicy_1526 PF02386 Cation transport protein Thicy_1530 PF12801 4Fe-4S binding domain Thicy_1530 PF13746 4Fe-4S dicluster domain Thicy_1530 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Thicy_1532 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Thicy_1532 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Thicy_1535 PF00115 Cytochrome C and Quinol oxidase polypeptide I Thicy_1536 PF00475 Imidazoleglycerol-phosphate dehydratase Thicy_1537 PF00117 Glutamine amidotransferase class-I Thicy_1538 PF00977 Histidine biosynthesis protein Thicy_1539 PF00977 Histidine biosynthesis protein Thicy_1540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Thicy_1541 PF01230 HIT domain Thicy_1542 PF02416 mttA/Hcf106 family Thicy_1543 PF02416 mttA/Hcf106 family Thicy_1544 PF00902 Sec-independent protein translocase protein (TatC) Thicy_1547 PF04542 Sigma-70 region 2 Thicy_1547 PF04545 Sigma-70, region 4 Thicy_1547 PF00140 Sigma-70 factor, region 1.2 Thicy_1550 PF01725 Ham1 family Thicy_1552 PF03466 LysR substrate binding domain Thicy_1552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_1564 PF00101 Ribulose bisphosphate carboxylase, small chain Thicy_1565 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Thicy_1565 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Thicy_1566 PF04247 Invasion gene expression up-regulator, SirB Thicy_1567 PF08241 Methyltransferase domain Thicy_1568 PF00561 alpha/beta hydrolase fold Thicy_1569 PF00313 'Cold-shock' DNA-binding domain Thicy_1571 PF00155 Aminotransferase class I and II Thicy_1572 PF06968 Biotin and Thiamin Synthesis associated domain Thicy_1572 PF04055 Radical SAM superfamily Thicy_1573 PF00156 Phosphoribosyl transferase domain Thicy_1574 PF02595 Glycerate kinase family Thicy_1575 PF00128 Alpha amylase, catalytic domain Thicy_1578 PF13361 UvrD-like helicase C-terminal domain Thicy_1578 PF00580 UvrD/REP helicase N-terminal domain Thicy_1579 PF00085 Thioredoxin Thicy_1580 PF07497 Rho termination factor, RNA-binding domain Thicy_1580 PF07498 Rho termination factor, N-terminal domain Thicy_1580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thicy_1581 PF01197 Ribosomal protein L31 Thicy_1582 PF01208 Uroporphyrinogen decarboxylase (URO-D) Thicy_1583 PF04362 Bacterial Fe(2+) trafficking Thicy_1584 PF14815 NUDIX domain Thicy_1584 PF00730 HhH-GPD superfamily base excision DNA repair protein Thicy_1585 PF02390 Putative methyltransferase Thicy_1586 PF00476 DNA polymerase family A Thicy_1586 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Thicy_1586 PF01367 5'-3' exonuclease, C-terminal SAM fold Thicy_1586 PF01612 3'-5' exonuclease Thicy_1589 PF01171 PP-loop family Thicy_1590 PF05958 tRNA (Uracil-5-)-methyltransferase Thicy_1593 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Thicy_1595 PF13667 ThiC-associated domain Thicy_1595 PF01964 Radical SAM ThiC family Thicy_1596 PF01266 FAD dependent oxidoreductase Thicy_1598 PF05690 Thiazole biosynthesis protein ThiG Thicy_1599 PF13614 AAA domain Thicy_1601 PF08534 Redoxin Thicy_1602 PF04264 YceI-like domain Thicy_1603 PF01040 UbiA prenyltransferase family Thicy_1605 PF00132 Bacterial transferase hexapeptide (six repeats) Thicy_1605 PF14602 Hexapeptide repeat of succinyl-transferase Thicy_1605 PF12804 MobA-like NTP transferase domain Thicy_1606 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Thicy_1606 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Thicy_1607 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thicy_1607 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thicy_1608 PF00231 ATP synthase Thicy_1609 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thicy_1609 PF00306 ATP synthase alpha/beta chain, C terminal domain Thicy_1609 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thicy_1610 PF00213 ATP synthase delta (OSCP) subunit Thicy_1611 PF00430 ATP synthase B/B' CF(0) Thicy_1612 PF00137 ATP synthase subunit C Thicy_1613 PF00119 ATP synthase A chain Thicy_1616 PF02195 ParB-like nuclease domain Thicy_1616 PF17762 HTH domain found in ParB protein Thicy_1617 PF13614 AAA domain Thicy_1618 PF02527 rRNA small subunit methyltransferase G Thicy_1619 PF13932 GidA associated domain Thicy_1619 PF01134 Glucose inhibited division protein A Thicy_1621 PF08482 ATP-dependent helicase C-terminal Thicy_1621 PF00271 Helicase conserved C-terminal domain Thicy_1621 PF04408 Helicase associated domain (HA2) Thicy_1621 PF00270 DEAD/DEAH box helicase Thicy_1623 PF01613 Flavin reductase like domain Thicy_1624 PF14489 QueF-like protein Thicy_1624 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Thicy_1625 PF07715 TonB-dependent Receptor Plug Domain Thicy_1625 PF07660 Secretin and TonB N terminus short domain Thicy_1625 PF00593 TonB dependent receptor Thicy_1630 PF02602 Uroporphyrinogen-III synthase HemD Thicy_1631 PF03900 Porphobilinogen deaminase, C-terminal domain Thicy_1631 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Thicy_1633 PF14698 Argininosuccinate lyase C-terminal Thicy_1633 PF00206 Lyase Thicy_1635 PF00501 AMP-binding enzyme Thicy_1635 PF01553 Acyltransferase Thicy_1636 PF07690 Major Facilitator Superfamily Thicy_1637 PF09308 LuxQ, periplasmic Thicy_1637 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1637 PF00072 Response regulator receiver domain Thicy_1637 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1639 PF03449 Transcription elongation factor, N-terminal Thicy_1639 PF01272 Transcription elongation factor, GreA/GreB, C-term Thicy_1640 PF01432 Peptidase family M3 Thicy_1641 PF00156 Phosphoribosyl transferase domain Thicy_1642 PF01925 Sulfite exporter TauE/SafE Thicy_1643 PF02096 60Kd inner membrane protein Thicy_1643 PF14849 YidC periplasmic domain Thicy_1644 PF00825 Ribonuclease P Thicy_1645 PF00468 Ribosomal protein L34 Thicy_1646 PF02463 RecF/RecN/SMC N terminal domain Thicy_1647 PF00986 DNA gyrase B subunit, carboxyl terminus Thicy_1647 PF18053 DNA gyrase B subunit insert domain Thicy_1647 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1647 PF00204 DNA gyrase B Thicy_1647 PF01751 Toprim domain Thicy_1648 PF00485 Phosphoribulokinase / Uridine kinase family Thicy_1650 PF00512 His Kinase A (phospho-acceptor) domain Thicy_1650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thicy_1651 PF01479 S4 domain Thicy_1652 PF01218 Coproporphyrinogen III oxidase Thicy_1653 PF01435 Peptidase family M48 Thicy_1653 PF07720 Tetratricopeptide repeat Thicy_1654 PF01926 50S ribosome-binding GTPase Thicy_1655 PF05140 ResB-like family Thicy_1656 PF01578 Cytochrome C assembly protein Thicy_1657 PF13462 Thioredoxin Thicy_1658 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Thicy_1658 PF00205 Thiamine pyrophosphate enzyme, central domain Thicy_1658 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Thicy_1659 PF00881 Nitroreductase family Thicy_1660 PF03466 LysR substrate binding domain Thicy_1660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_1662 PF01926 50S ribosome-binding GTPase Thicy_1662 PF12631 MnmE helical domain Thicy_1662 PF10396 GTP-binding protein TrmE N-terminus Thicy_1663 PF02028 BCCT, betaine/carnitine/choline family transporter Thicy_1664 PF01300 Telomere recombination Thicy_1665 PF00528 Binding-protein-dependent transport system inner membrane component Thicy_1667 PF08402 TOBE domain Thicy_1667 PF00005 ABC transporter Thicy_1669 PF13519 von Willebrand factor type A domain Thicy_1672 PF01882 Protein of unknown function DUF58 Thicy_1673 PF07726 ATPase family associated with various cellular activities (AAA) Thicy_1673 PF17863 AAA lid domain Thicy_1674 PF08003 Protein of unknown function (DUF1698) Thicy_1675 PF13649 Methyltransferase domain Thicy_1676 PF03466 LysR substrate binding domain Thicy_1676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thicy_1677 PF02678 Pirin Thicy_1677 PF17954 Quercetinase C-terminal cupin domain Thicy_1678 PF03358 NADPH-dependent FMN reductase Thicy_1679 PF01464 Transglycosylase SLT domain Thicy_1679 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Thicy_1682 PF00593 TonB dependent receptor Thicy_1682 PF07715 TonB-dependent Receptor Plug Domain Thicy_1683 PF01223 DNA/RNA non-specific endonuclease