locus-tag class description AYJ59_00020 IPR013766 Thioredoxin domain AYJ59_00020 IPR017937 Thioredoxin, conserved site AYJ59_00020 IPR036249 Thioredoxin-like superfamily AYJ59_00020 IPR005746 Thioredoxin AYJ59_00040 IPR033881 von Willebrand factor domain BatA-type AYJ59_00040 IPR002035 von Willebrand factor, type A AYJ59_00040 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_00050 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_00050 IPR002881 Domain of unknown function DUF58 AYJ59_00055 IPR011703 ATPase, AAA-3 AYJ59_00055 IPR041628 ChlI/MoxR, AAA lid domain AYJ59_00055 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00060 IPR036259 MFS transporter superfamily AYJ59_00060 IPR020846 Major facilitator superfamily domain AYJ59_00060 IPR011701 Major facilitator superfamily AYJ59_00075 IPR029787 Nucleotide cyclase AYJ59_00075 IPR000160 GGDEF domain AYJ59_00075 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00075 IPR011006 CheY-like superfamily AYJ59_00080 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase AYJ59_00080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_00085 IPR018524 DNA/RNA non-specific endonuclease, active site AYJ59_00085 IPR040255 Non-specific endonuclease AYJ59_00085 IPR020821 Extracellular Endonuclease, subunit A AYJ59_00085 IPR001604 DNA/RNA non-specific endonuclease AYJ59_00090 IPR023664 Murein transglycosylase-C AYJ59_00090 IPR008258 Transglycosylase SLT domain 1 AYJ59_00090 IPR000189 Prokaryotic transglycosylase, active site AYJ59_00090 IPR024570 Murein transglycosylase-C, N-terminal AYJ59_00090 IPR023346 Lysozyme-like domain superfamily AYJ59_00100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_00100 IPR041698 Methyltransferase domain 25 AYJ59_00100 IPR005271 Carboxy-S-adenosyl-L-methionine synthase AYJ59_00105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_00105 IPR027555 tRNA (mo5U34)-methyltransferase-like AYJ59_00105 IPR010017 tRNA U34 carboxymethyltransferase AYJ59_00115 IPR011006 CheY-like superfamily AYJ59_00115 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_00115 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_00115 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_00115 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_00115 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_00115 IPR035965 PAS domain superfamily AYJ59_00115 IPR015387 LuxQ, periplasmic AYJ59_00115 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_00115 IPR005467 Histidine kinase domain AYJ59_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00120 IPR011703 ATPase, AAA-3 AYJ59_00120 IPR041628 ChlI/MoxR, AAA lid domain AYJ59_00125 IPR002881 Domain of unknown function DUF58 AYJ59_00125 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_00140 IPR024163 Aerotolerance regulator, N-terminal AYJ59_00140 IPR022933 Uncharacterised protein family UPF0353 AYJ59_00140 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_00140 IPR002035 von Willebrand factor, type A AYJ59_00150 IPR002123 Phospholipid/glycerol acyltransferase AYJ59_00150 IPR020845 AMP-binding, conserved site AYJ59_00150 IPR000873 AMP-dependent synthetase/ligase AYJ59_00150 IPR023775 Bifunctional protein Aas AYJ59_00150 IPR042099 AMP-dependent synthetase-like superfamily AYJ59_00155 IPR036259 MFS transporter superfamily AYJ59_00155 IPR023727 Lysophospholipid transporter LplT AYJ59_00155 IPR011701 Major facilitator superfamily AYJ59_00165 IPR024607 Sulfatase, conserved site AYJ59_00165 IPR017850 Alkaline-phosphatase-like, core domain superfamily AYJ59_00165 IPR000917 Sulfatase, N-terminal AYJ59_00170 IPR013785 Aldolase-type TIM barrel AYJ59_00170 IPR007197 Radical SAM AYJ59_00170 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme AYJ59_00170 IPR023885 4Fe4S-binding SPASM domain AYJ59_00175 IPR003660 HAMP domain AYJ59_00175 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_00175 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_00175 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_00175 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_00175 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_00175 IPR005467 Histidine kinase domain AYJ59_00180 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_00180 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_00180 IPR002197 DNA binding HTH domain, Fis-type AYJ59_00180 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00180 IPR009057 Homeobox-like domain superfamily AYJ59_00180 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_00180 IPR011006 CheY-like superfamily AYJ59_00180 IPR003593 AAA+ ATPase domain AYJ59_00200 IPR021320 Protein of unknown function DUF2905 AYJ59_00205 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AYJ59_00205 IPR001567 Peptidase M3A/M3B catalytic domain AYJ59_00210 IPR035917 YjbQ-like superfamily AYJ59_00210 IPR001602 Uncharacterised protein family UPF0047 AYJ59_00225 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein AYJ59_00225 IPR003841 Sodium-dependent phosphate transport protein AYJ59_00230 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_00230 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AYJ59_00230 IPR005281 Monovalent cation:proton antiporter, subunit B AYJ59_00230 IPR025383 Domain of unknown function DUF4040 AYJ59_00230 IPR005663 Monovalent cation proton antiporter subunit A AYJ59_00230 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AYJ59_00235 IPR006673 Mnh complex subunit C1 AYJ59_00235 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AYJ59_00240 IPR004775 Na(+)/H(+) antiporter subunit D1 AYJ59_00240 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_00250 IPR007208 Na(+)/H(+) antiporter subunit F-like AYJ59_00255 IPR005133 Na+/H+ antiporter subunit G AYJ59_00260 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_00260 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA AYJ59_00260 IPR001036 Acriflavin resistance protein AYJ59_00265 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_00265 IPR006143 RND efflux pump, membrane fusion protein AYJ59_00275 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_00275 IPR000847 Transcription regulator HTH, LysR AYJ59_00275 IPR005119 LysR, substrate-binding AYJ59_00275 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_00280 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AYJ59_00280 IPR029479 Nitroreductase AYJ59_00280 IPR000415 Nitroreductase-like AYJ59_00290 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AYJ59_00290 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AYJ59_00290 IPR000399 TPP-binding enzyme, conserved site AYJ59_00290 IPR012782 Acetolactate synthase, catabolic AYJ59_00290 IPR029061 Thiamin diphosphate-binding fold AYJ59_00290 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ59_00290 IPR012000 Thiamine pyrophosphate enzyme, central domain AYJ59_00295 IPR036249 Thioredoxin-like superfamily AYJ59_00295 IPR017937 Thioredoxin, conserved site AYJ59_00295 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AYJ59_00295 IPR001853 DSBA-like thioredoxin domain AYJ59_00295 IPR013766 Thioredoxin domain AYJ59_00300 IPR017562 Cytochrome c-type biogenesis protein CcsA AYJ59_00300 IPR002541 Cytochrome c assembly protein AYJ59_00305 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB AYJ59_00305 IPR007816 ResB-like domain AYJ59_00310 IPR006073 GTP binding domain AYJ59_00310 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AYJ59_00310 IPR030393 EngB-type guanine nucleotide-binding (G) domain AYJ59_00310 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00325 IPR003660 HAMP domain AYJ59_00325 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_00325 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_00325 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_00325 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_00325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_00330 IPR008918 Helix-hairpin-helix motif, class 2 AYJ59_00330 IPR029060 PIN-like domain superfamily AYJ59_00330 IPR002562 3'-5' exonuclease domain AYJ59_00330 IPR002298 DNA polymerase A AYJ59_00330 IPR020045 DNA polymerase I-like, H3TH domain AYJ59_00330 IPR036397 Ribonuclease H superfamily AYJ59_00330 IPR002421 5'-3' exonuclease, N-terminal AYJ59_00330 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AYJ59_00330 IPR019760 DNA-directed DNA polymerase, family A, conserved site AYJ59_00330 IPR018320 DNA polymerase 1 AYJ59_00330 IPR001098 DNA-directed DNA polymerase, family A, palm domain AYJ59_00330 IPR012337 Ribonuclease H-like superfamily AYJ59_00330 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AYJ59_00335 IPR011009 Protein kinase-like domain superfamily AYJ59_00335 IPR005280 Homoserine kinase, type II AYJ59_00335 IPR002575 Aminoglycoside phosphotransferase AYJ59_00350 IPR036581 Cyanate lyase, C-terminal domain superfamily AYJ59_00350 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AYJ59_00350 IPR003712 Cyanate lyase, C-terminal AYJ59_00350 IPR008076 Cyanate hydratase AYJ59_00365 IPR041364 Rubredoxin binding domain AYJ59_00365 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_00365 IPR023753 FAD/NAD(P)-binding domain AYJ59_00375 IPR004881 Ribosome biogenesis GTPase RsgA AYJ59_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00375 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AYJ59_00375 IPR010914 RsgA GTPase domain AYJ59_00390 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_00390 IPR010113 Nif-specific regulatory protein AYJ59_00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00390 IPR002197 DNA binding HTH domain, Fis-type AYJ59_00390 IPR009057 Homeobox-like domain superfamily AYJ59_00390 IPR029016 GAF-like domain superfamily AYJ59_00390 IPR003018 GAF domain AYJ59_00390 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_00390 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_00390 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_00390 IPR003593 AAA+ ATPase domain AYJ59_00400 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_00400 IPR035906 MetI-like superfamily AYJ59_00400 IPR005889 Nitrate transport permease AYJ59_00410 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AYJ59_00410 IPR017871 ABC transporter, conserved site AYJ59_00410 IPR003439 ABC transporter-like AYJ59_00410 IPR003593 AAA+ ATPase domain AYJ59_00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00420 IPR001898 Solute carrier family 13 AYJ59_00425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_00425 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_00425 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_00425 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_00425 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_00425 IPR003660 HAMP domain AYJ59_00430 IPR029787 Nucleotide cyclase AYJ59_00430 IPR005330 MHYT domain AYJ59_00430 IPR001633 EAL domain AYJ59_00430 IPR035919 EAL domain superfamily AYJ59_00430 IPR000160 GGDEF domain AYJ59_00460 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AYJ59_00460 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ59_00460 IPR001279 Metallo-beta-lactamase AYJ59_00460 IPR022712 Beta-Casp domain AYJ59_00465 IPR001123 Amino acid exporter protein, LeuE-type AYJ59_00470 IPR000700 PAS-associated, C-terminal AYJ59_00470 IPR029787 Nucleotide cyclase AYJ59_00470 IPR000014 PAS domain AYJ59_00470 IPR035965 PAS domain superfamily AYJ59_00470 IPR013656 PAS fold-4 AYJ59_00470 IPR000160 GGDEF domain AYJ59_00480 IPR000412 ABC-2 transporter AYJ59_00485 IPR000412 ABC-2 transporter AYJ59_00490 IPR003439 ABC transporter-like AYJ59_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00490 IPR017871 ABC transporter, conserved site AYJ59_00490 IPR003593 AAA+ ATPase domain AYJ59_00495 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_00500 IPR006070 YrdC-like domain AYJ59_00500 IPR023535 Threonylcarbamoyl-AMP synthase AYJ59_00500 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ59_00505 IPR011990 Tetratricopeptide-like helical domain superfamily AYJ59_00505 IPR030873 Beta-barrel assembly-enhancing protease AYJ59_00505 IPR001915 Peptidase M48 AYJ59_00510 IPR001260 Coproporphyrinogen III oxidase, aerobic AYJ59_00510 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily AYJ59_00510 IPR018375 Coproporphyrinogen III oxidase, conserved site AYJ59_00515 IPR025708 Heat shock protein 15 AYJ59_00515 IPR036986 RNA-binding S4 domain superfamily AYJ59_00515 IPR002942 RNA-binding S4 domain AYJ59_00520 IPR036736 ACP-like superfamily AYJ59_00520 IPR009081 Phosphopantetheine binding ACP domain AYJ59_00520 IPR003231 Acyl carrier protein (ACP) AYJ59_00525 IPR042099 AMP-dependent synthetase-like superfamily AYJ59_00525 IPR000873 AMP-dependent synthetase/ligase AYJ59_00525 IPR020845 AMP-binding, conserved site AYJ59_00525 IPR025110 AMP-binding enzyme, C-terminal domain AYJ59_00530 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AYJ59_00530 IPR029069 HotDog domain superfamily AYJ59_00530 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AYJ59_00550 IPR006905 Flavin-dependent halogenase AYJ59_00550 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_00555 IPR017871 ABC transporter, conserved site AYJ59_00555 IPR003439 ABC transporter-like AYJ59_00555 IPR003593 AAA+ ATPase domain AYJ59_00555 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_00565 IPR007848 Methyltransferase small domain AYJ59_00565 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD AYJ59_00565 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_00570 IPR001123 Amino acid exporter protein, LeuE-type AYJ59_00585 IPR016039 Thiolase-like AYJ59_00585 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYJ59_00585 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AYJ59_00585 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AYJ59_00610 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_00610 IPR036291 NAD(P)-binding domain superfamily AYJ59_00610 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative AYJ59_00625 IPR016039 Thiolase-like AYJ59_00625 IPR018201 Beta-ketoacyl synthase, active site AYJ59_00625 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ59_00625 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ59_00625 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ59_00625 IPR000794 Beta-ketoacyl synthase AYJ59_00645 IPR006083 Phosphoribulokinase/uridine kinase AYJ59_00645 IPR006082 Phosphoribulokinase AYJ59_00645 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00650 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AYJ59_00650 IPR001241 DNA topoisomerase, type IIA AYJ59_00650 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_00650 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_00650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_00650 IPR018522 DNA topoisomerase, type IIA, conserved site AYJ59_00650 IPR006171 TOPRIM domain AYJ59_00650 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_00650 IPR011557 DNA gyrase, subunit B AYJ59_00650 IPR002288 DNA gyrase B subunit, C-terminal AYJ59_00650 IPR034160 DNA gyrase subunit B, TOPRIM domain AYJ59_00650 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AYJ59_00650 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AYJ59_00650 IPR041423 DNA gyrase subunit B insert domain AYJ59_00670 IPR001036 Acriflavin resistance protein AYJ59_00670 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_00670 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA AYJ59_00695 IPR011006 CheY-like superfamily AYJ59_00695 IPR001867 OmpR/PhoB-type DNA-binding domain AYJ59_00695 IPR039420 Transcriptional regulatory protein WalR-like AYJ59_00695 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_00695 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00700 IPR042174 DNA-binding RecF, domain 2 AYJ59_00700 IPR001238 DNA-binding, RecF AYJ59_00700 IPR003395 RecF/RecN/SMC, N-terminal AYJ59_00700 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00700 IPR018078 DNA-binding, RecF, conserved site AYJ59_00705 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AYJ59_00705 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AYJ59_00705 IPR001001 DNA polymerase III, beta sliding clamp AYJ59_00705 IPR022637 DNA polymerase III, beta sliding clamp, central AYJ59_00710 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AYJ59_00710 IPR013317 Chromosomal replication initiator protein DnaA AYJ59_00710 IPR003593 AAA+ ATPase domain AYJ59_00710 IPR010921 Trp repressor/replication initiator AYJ59_00710 IPR001957 Chromosomal replication control, initiator DnaA AYJ59_00710 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ59_00710 IPR013159 Chromosomal replication initiator, DnaA C-terminal AYJ59_00710 IPR024633 DnaA N-terminal domain AYJ59_00710 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00710 IPR038454 DnaA, N-terminal domain superfamily AYJ59_00720 IPR002781 Transmembrane protein TauE-like AYJ59_00725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_00725 IPR000100 Ribonuclease P AYJ59_00725 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_00730 IPR019998 Membrane insertase YidC AYJ59_00730 IPR038210 Membrane insertase YidC, periplasmic domain AYJ59_00730 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AYJ59_00730 IPR028053 Membrane insertase YidC, N-terminal AYJ59_00730 IPR038221 YidC, periplasmic domain superfamily AYJ59_00730 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AYJ59_00740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00740 IPR031168 TrmE-type guanine nucleotide-binding domain AYJ59_00740 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AYJ59_00740 IPR005225 Small GTP-binding protein domain AYJ59_00740 IPR018948 GTP-binding protein TrmE, N-terminal AYJ59_00740 IPR004520 tRNA modification GTPase MnmE AYJ59_00740 IPR006073 GTP binding domain AYJ59_00740 IPR027368 tRNA modification GTPase MnmE domain 2 AYJ59_00740 IPR025867 MnmE, helical domain AYJ59_00750 IPR015796 Impact family, bacterial/archaeal AYJ59_00750 IPR001498 Impact, N-terminal AYJ59_00750 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AYJ59_00750 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AYJ59_00750 IPR035647 EF-G domain III/V-like AYJ59_00750 IPR023582 Impact family AYJ59_00750 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_00750 IPR036956 Impact, N-terminal domain superfamily AYJ59_00765 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AYJ59_00765 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AYJ59_00765 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AYJ59_00770 IPR001633 EAL domain AYJ59_00770 IPR035919 EAL domain superfamily AYJ59_00770 IPR000160 GGDEF domain AYJ59_00770 IPR005330 MHYT domain AYJ59_00770 IPR029787 Nucleotide cyclase AYJ59_00770 IPR035965 PAS domain superfamily AYJ59_00780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_00780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_00780 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_00780 IPR005467 Histidine kinase domain AYJ59_00780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_00780 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_00790 IPR003593 AAA+ ATPase domain AYJ59_00790 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_00790 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_00790 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_00790 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00790 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_00790 IPR011006 CheY-like superfamily AYJ59_00790 IPR009057 Homeobox-like domain superfamily AYJ59_00805 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_00805 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_00805 IPR000847 Transcription regulator HTH, LysR AYJ59_00805 IPR005119 LysR, substrate-binding AYJ59_00805 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AYJ59_00810 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AYJ59_00810 IPR038071 UROD/MetE-like superfamily AYJ59_00810 IPR006276 Cobalamin-independent methionine synthase AYJ59_00810 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AYJ59_00825 IPR018062 HTH domain AraC-type, conserved site AYJ59_00825 IPR018060 DNA binding HTH domain, AraC-type AYJ59_00830 IPR029032 AhpD-like AYJ59_00830 IPR004675 Alkylhydroperoxidase AhpD core AYJ59_00830 IPR003779 Carboxymuconolactone decarboxylase-like AYJ59_00840 IPR018187 Asp/Glu racemase, active site 1 AYJ59_00840 IPR001920 Asp/Glu racemase AYJ59_00840 IPR033134 Asp/Glu racemase, active site 2 AYJ59_00840 IPR015942 Asp/Glu/hydantoin racemase AYJ59_00840 IPR004391 Glutamate racemase AYJ59_00850 IPR029787 Nucleotide cyclase AYJ59_00850 IPR000160 GGDEF domain AYJ59_00855 IPR002585 Cytochrome ubiquinol oxidase subunit 1 AYJ59_00860 IPR003317 Cytochrome ubiquinol oxidase subunit 2 AYJ59_00865 IPR000412 ABC-2 transporter AYJ59_00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00870 IPR003439 ABC transporter-like AYJ59_00870 IPR017871 ABC transporter, conserved site AYJ59_00870 IPR003593 AAA+ ATPase domain AYJ59_00870 IPR000412 ABC-2 transporter AYJ59_00875 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AYJ59_00880 IPR003423 Outer membrane efflux protein AYJ59_00880 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AYJ59_00890 IPR018752 Uncharacterised protein family UPF0753 AYJ59_00895 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_00895 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AYJ59_00900 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ59_00900 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_00900 IPR011006 CheY-like superfamily AYJ59_00900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_00900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_00900 IPR005467 Histidine kinase domain AYJ59_00900 IPR000014 PAS domain AYJ59_00900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_00900 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00900 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_00900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_00900 IPR036641 HPT domain superfamily AYJ59_00900 IPR035965 PAS domain superfamily AYJ59_00900 IPR000700 PAS-associated, C-terminal AYJ59_00900 IPR013767 PAS fold AYJ59_00905 IPR011006 CheY-like superfamily AYJ59_00905 IPR003607 HD/PDEase domain AYJ59_00905 IPR037522 HD-GYP domain AYJ59_00905 IPR001789 Signal transduction response regulator, receiver domain AYJ59_00915 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_00915 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG AYJ59_00915 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related AYJ59_00915 IPR020595 MnmG-related, conserved site AYJ59_00915 IPR026904 GidA associated domain 3 AYJ59_00920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_00920 IPR003682 rRNA small subunit methyltransferase G AYJ59_00925 IPR025669 AAA domain AYJ59_00925 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00930 IPR041468 ParB/Spo0J, HTH domain AYJ59_00930 IPR004437 ParB/RepB/Spo0J partition protein AYJ59_00930 IPR003115 ParB/Sulfiredoxin AYJ59_00930 IPR036086 ParB/Sulfiredoxin superfamily AYJ59_00945 IPR023011 ATP synthase, F0 complex, subunit A, active site AYJ59_00945 IPR000568 ATP synthase, F0 complex, subunit A AYJ59_00945 IPR035908 ATP synthase, F0 complex, subunit A superfamily AYJ59_00950 IPR038662 F1F0 ATP synthase subunit C superfamily AYJ59_00950 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AYJ59_00950 IPR035921 F/V-ATP synthase subunit C superfamily AYJ59_00950 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast AYJ59_00950 IPR000454 ATP synthase, F0 complex, subunit C AYJ59_00950 IPR002379 V-ATPase proteolipid subunit C-like domain AYJ59_00955 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AYJ59_00955 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AYJ59_00955 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AYJ59_00960 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AYJ59_00960 IPR000711 ATPase, OSCP/delta subunit AYJ59_00965 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AYJ59_00965 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00965 IPR000793 ATP synthase, alpha subunit, C-terminal AYJ59_00965 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AYJ59_00965 IPR005294 ATP synthase, F1 complex, alpha subunit AYJ59_00965 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AYJ59_00965 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AYJ59_00965 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AYJ59_00965 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AYJ59_00965 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AYJ59_00970 IPR000131 ATP synthase, F1 complex, gamma subunit AYJ59_00970 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AYJ59_00970 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site AYJ59_00975 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AYJ59_00975 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AYJ59_00975 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AYJ59_00975 IPR003593 AAA+ ATPase domain AYJ59_00975 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AYJ59_00975 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_00975 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AYJ59_00975 IPR005722 ATP synthase, F1 complex, beta subunit AYJ59_00980 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AYJ59_00980 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily AYJ59_00980 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AYJ59_00980 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AYJ59_00980 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AYJ59_00985 IPR025877 MobA-like NTP transferase AYJ59_00985 IPR001451 Hexapeptide repeat AYJ59_00985 IPR038009 GlmU, C-terminal LbH domain AYJ59_00985 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AYJ59_00985 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_00985 IPR011004 Trimeric LpxA-like superfamily AYJ59_00995 IPR030470 UbiA prenyltransferase conserved site AYJ59_00995 IPR000537 UbiA prenyltransferase family AYJ59_00995 IPR039653 Prenyltransferase AYJ59_00995 IPR006370 4-hydroxybenzoate polyprenyltransferase-like AYJ59_01025 IPR039425 RNA polymerase sigma-70 like AYJ59_01025 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AYJ59_01025 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AYJ59_01025 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_01025 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_01025 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_01025 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_01025 IPR014284 RNA polymerase sigma-70 like domain AYJ59_01035 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AYJ59_01035 IPR007440 Chorismate--pyruvate lyase AYJ59_01040 IPR001650 Helicase, C-terminal AYJ59_01040 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01040 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_01040 IPR011545 DEAD/DEAH box helicase domain AYJ59_01040 IPR004609 ATP-dependent DNA helicase RecG AYJ59_01040 IPR033454 RecG, wedge domain AYJ59_01040 IPR012340 Nucleic acid-binding, OB-fold AYJ59_01055 IPR003439 ABC transporter-like AYJ59_01055 IPR017871 ABC transporter, conserved site AYJ59_01055 IPR003593 AAA+ ATPase domain AYJ59_01055 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01065 IPR023446 Carnitine operon protein CaiE AYJ59_01065 IPR001451 Hexapeptide repeat AYJ59_01065 IPR011004 Trimeric LpxA-like superfamily AYJ59_01075 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01075 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ59_01075 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ59_01085 IPR029020 Ammonium/urea transporter AYJ59_01085 IPR001905 Ammonium transporter AYJ59_01085 IPR018047 Ammonium transporter, conserved site AYJ59_01085 IPR003660 HAMP domain AYJ59_01085 IPR024041 Ammonium transporter AmtB-like domain AYJ59_01090 IPR019897 RidA, conserved site AYJ59_01090 IPR035959 RutC-like superfamily AYJ59_01090 IPR006175 YjgF/YER057c/UK114 family AYJ59_01090 IPR006056 RidA family AYJ59_01095 IPR006128 Adhesion lipoprotein AYJ59_01095 IPR006127 Periplasmic solute binding protein, ZnuA-like AYJ59_01095 IPR006129 Adhesin B AYJ59_01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01100 IPR017871 ABC transporter, conserved site AYJ59_01100 IPR003439 ABC transporter-like AYJ59_01100 IPR003593 AAA+ ATPase domain AYJ59_01105 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_01105 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_01105 IPR001626 ABC transporter, TroCD-like AYJ59_01105 IPR037294 ABC transporter, BtuC-like AYJ59_01110 IPR037294 ABC transporter, BtuC-like AYJ59_01110 IPR001626 ABC transporter, TroCD-like AYJ59_01120 IPR004811 RelA/SpoT family AYJ59_01120 IPR003607 HD/PDEase domain AYJ59_01120 IPR012675 Beta-grasp domain superfamily AYJ59_01120 IPR002912 ACT domain AYJ59_01120 IPR033655 RelA, TGS domain AYJ59_01120 IPR012676 TGS-like AYJ59_01120 IPR004095 TGS AYJ59_01120 IPR007685 RelA/SpoT AYJ59_01125 IPR006110 RNA polymerase, subunit omega/K/RPB6 AYJ59_01125 IPR003716 DNA-directed RNA polymerase, omega subunit AYJ59_01125 IPR036161 RPB6/omega subunit-like superfamily AYJ59_01125 IPR012293 RNA polymerase subunit, RPB6/omega AYJ59_01135 IPR003329 Acylneuraminate cytidylyltransferase AYJ59_01135 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AYJ59_01135 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_01140 IPR039697 Iron-type alcohol dehydrogenase-like AYJ59_01140 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AYJ59_01145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_01145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_01145 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_01145 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AYJ59_01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01150 IPR017665 Guanylate kinase AYJ59_01150 IPR008144 Guanylate kinase-like domain AYJ59_01150 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AYJ59_01150 IPR020590 Guanylate kinase, conserved site AYJ59_01155 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01155 IPR031322 Shikimate kinase/gluconokinase AYJ59_01155 IPR023000 Shikimate kinase, conserved site AYJ59_01155 IPR000623 Shikimate kinase/Threonine synthase-like 1 AYJ59_01160 IPR016037 3-dehydroquinate synthase AroB AYJ59_01160 IPR030960 3-dehydroquinate synthase domain AYJ59_01160 IPR030963 3-dehydroquinate synthase family AYJ59_01165 IPR011013 Galactose mutarotase-like domain superfamily AYJ59_01165 IPR025532 Glucose-6-phosphate 1-epimerase AYJ59_01165 IPR014718 Glycoside hydrolase-type carbohydrate-binding AYJ59_01165 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase AYJ59_01170 IPR000943 RNA polymerase sigma-70 AYJ59_01170 IPR014284 RNA polymerase sigma-70 like domain AYJ59_01170 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AYJ59_01170 IPR009042 RNA polymerase sigma-70 region 1.2 AYJ59_01170 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_01170 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_01170 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_01170 IPR007630 RNA polymerase sigma-70 region 4 AYJ59_01180 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_01180 IPR011054 Rudiment single hybrid motif AYJ59_01180 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase AYJ59_01180 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AYJ59_01180 IPR011761 ATP-grasp fold AYJ59_01180 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_01180 IPR001509 NAD-dependent epimerase/dehydratase AYJ59_01185 IPR029787 Nucleotide cyclase AYJ59_01185 IPR035919 EAL domain superfamily AYJ59_01185 IPR005330 MHYT domain AYJ59_01185 IPR035965 PAS domain superfamily AYJ59_01185 IPR000160 GGDEF domain AYJ59_01185 IPR001633 EAL domain AYJ59_01190 IPR035994 Nucleoside phosphorylase superfamily AYJ59_01190 IPR010049 MTA/SAH nucleosidase AYJ59_01190 IPR000845 Nucleoside phosphorylase domain AYJ59_01195 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily AYJ59_01195 IPR003815 S-ribosylhomocysteinase (LuxS) AYJ59_01195 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_01205 IPR036909 Cytochrome c-like domain superfamily AYJ59_01205 IPR009056 Cytochrome c-like domain AYJ59_01210 IPR035965 PAS domain superfamily AYJ59_01210 IPR036513 STAS domain superfamily AYJ59_01210 IPR000014 PAS domain AYJ59_01210 IPR000700 PAS-associated, C-terminal AYJ59_01210 IPR002645 STAS domain AYJ59_01210 IPR001610 PAC motif AYJ59_01215 IPR009061 Putative DNA-binding domain superfamily AYJ59_01215 IPR000551 MerR-type HTH domain AYJ59_01220 IPR002081 Cryptochrome/DNA photolyase class 1 AYJ59_01220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_01220 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AYJ59_01220 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AYJ59_01220 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AYJ59_01220 IPR006050 DNA photolyase, N-terminal AYJ59_01220 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AYJ59_01235 IPR003333 Mycolic acid cyclopropane synthase AYJ59_01235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_01245 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_01245 IPR002937 Amine oxidase AYJ59_01290 IPR004107 Integrase, SAM-like, N-terminal AYJ59_01290 IPR013762 Integrase-like, catalytic domain superfamily AYJ59_01290 IPR011010 DNA breaking-rejoining enzyme, catalytic core AYJ59_01290 IPR010998 Integrase/recombinase, N-terminal AYJ59_01290 IPR002104 Integrase, catalytic domain AYJ59_01345 IPR005119 LysR, substrate-binding AYJ59_01345 IPR000847 Transcription regulator HTH, LysR AYJ59_01345 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_01345 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_01350 IPR007272 Sulphur transport domain AYJ59_01360 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit AYJ59_01360 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AYJ59_01360 IPR016174 Di-haem cytochrome, transmembrane AYJ59_01365 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AYJ59_01365 IPR029014 [NiFe]-hydrogenase, large subunit AYJ59_01365 IPR001501 Nickel-dependent hydrogenase, large subunit AYJ59_01370 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AYJ59_01370 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AYJ59_01370 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AYJ59_01370 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AYJ59_01370 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AYJ59_01370 IPR001821 [NiFe]-hydrogenase, small subunit AYJ59_01370 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_01375 IPR004419 Peptidase A31, hydrogenase expression/formation protein AYJ59_01375 IPR000671 Peptidase A31 family AYJ59_01375 IPR023430 Peptidase HybD-like domain superfamily AYJ59_01380 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AYJ59_01380 IPR037254 HupF/HypC superfamily AYJ59_01385 IPR010893 [NiFe]-hydrogenase maturation factor HyaE AYJ59_01385 IPR036249 Thioredoxin-like superfamily AYJ59_01390 IPR006894 HupH hydrogenase expression protein, C-terminal AYJ59_01390 IPR038527 HupH, C-terminal domain superfamily AYJ59_01395 IPR024935 Rubredoxin domain AYJ59_01395 IPR018527 Rubredoxin, iron-binding site AYJ59_01395 IPR024934 Rubredoxin-like domain AYJ59_01410 IPR000688 Hydrogenase maturation factor HypA/HybF AYJ59_01410 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site AYJ59_01415 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01415 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ59_01415 IPR004392 Hydrogenase maturation factor HypB AYJ59_01420 IPR002197 DNA binding HTH domain, Fis-type AYJ59_01420 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01420 IPR001789 Signal transduction response regulator, receiver domain AYJ59_01420 IPR003593 AAA+ ATPase domain AYJ59_01420 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_01420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_01420 IPR011006 CheY-like superfamily AYJ59_01420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_01420 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_01420 IPR009057 Homeobox-like domain superfamily AYJ59_01425 IPR037254 HupF/HypC superfamily AYJ59_01425 IPR001109 Hydrogenase expression/formation protein, HupF/HypC AYJ59_01425 IPR019812 Hydrogenase assembly chaperone, conserved site AYJ59_01430 IPR001347 Sugar isomerase (SIS) AYJ59_01430 IPR035461 GmhA/DiaA AYJ59_01430 IPR004515 Phosphoheptose isomerase AYJ59_01435 IPR042244 HypD, domain 1 AYJ59_01435 IPR002780 Hydrogenase formation HypD protein AYJ59_01435 IPR042243 HypD, domain 2 AYJ59_01440 IPR036921 PurM-like, N-terminal domain superfamily AYJ59_01440 IPR016188 PurM-like, N-terminal domain AYJ59_01440 IPR036676 PurM-like, C-terminal domain superfamily AYJ59_01440 IPR010918 PurM-like, C-terminal domain AYJ59_01440 IPR011854 Carbamoyl dehydratase HypE AYJ59_01455 IPR003808 Fe-S metabolism associated domain, SufE-like AYJ59_01455 IPR023939 Cysteine desulfuration protein SufE AYJ59_01460 IPR001094 Flavodoxin-like AYJ59_01460 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_01460 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AYJ59_01460 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AYJ59_01460 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_01460 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AYJ59_01460 IPR029039 Flavoprotein-like superfamily AYJ59_01460 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_01460 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AYJ59_01460 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_01460 IPR008254 Flavodoxin/nitric oxide synthase AYJ59_01460 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AYJ59_01465 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AYJ59_01465 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AYJ59_01465 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AYJ59_01465 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AYJ59_01465 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AYJ59_01475 IPR011784 Sulphate adenylyltransferase, small subunit AYJ59_01475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_01475 IPR002500 Phosphoadenosine phosphosulphate reductase AYJ59_01480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01480 IPR005225 Small GTP-binding protein domain AYJ59_01480 IPR011779 Sulphate adenylyltransferase, large subunit AYJ59_01480 IPR000795 Transcription factor, GTP-binding domain AYJ59_01480 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_01480 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ59_01480 IPR031157 Tr-type G domain, conserved site AYJ59_01480 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AYJ59_01485 IPR031312 Sodium/sulphate symporter, conserved site AYJ59_01485 IPR006037 Regulator of K+ conductance, C-terminal AYJ59_01485 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AYJ59_01485 IPR004680 Citrate transporter-like domain AYJ59_01490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_01490 IPR002500 Phosphoadenosine phosphosulphate reductase AYJ59_01490 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AYJ59_01490 IPR011798 Adenosine 5'-phosphosulphate reductase AYJ59_01495 IPR001501 Nickel-dependent hydrogenase, large subunit AYJ59_01495 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site AYJ59_01495 IPR029014 [NiFe]-hydrogenase, large subunit AYJ59_01500 IPR027394 Cytochrome-c3 hydrogenase, C-terminal AYJ59_01500 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AYJ59_01500 IPR001821 [NiFe]-hydrogenase, small subunit AYJ59_01500 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily AYJ59_01500 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily AYJ59_01505 IPR033479 Double Cache domain 1 AYJ59_01505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_01505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_01505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_01505 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_01505 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AYJ59_01505 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_01505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_01505 IPR005467 Histidine kinase domain AYJ59_01510 IPR001792 Acylphosphatase-like domain AYJ59_01510 IPR036046 Acylphosphatase-like domain superfamily AYJ59_01510 IPR017968 Acylphosphatase, conserved site AYJ59_01510 IPR011125 Zinc finger, HypF-type AYJ59_01510 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ59_01510 IPR004421 Carbamoyltransferase, HypF-type AYJ59_01510 IPR006070 YrdC-like domain AYJ59_01510 IPR041440 HypF, Kae1-like domain AYJ59_01535 IPR004107 Integrase, SAM-like, N-terminal AYJ59_01535 IPR010998 Integrase/recombinase, N-terminal AYJ59_01535 IPR013762 Integrase-like, catalytic domain superfamily AYJ59_01535 IPR002104 Integrase, catalytic domain AYJ59_01535 IPR011010 DNA breaking-rejoining enzyme, catalytic core AYJ59_01540 IPR001207 Transposase, mutator type AYJ59_01545 IPR002355 Multicopper oxidase, copper-binding site AYJ59_01545 IPR008972 Cupredoxin AYJ59_01545 IPR011706 Multicopper oxidase, type 2 AYJ59_01545 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AYJ59_01545 IPR034284 Copper resistance protein, first cupredoxin domain AYJ59_01545 IPR034282 Copper resistance protein CopA, second cupredoxin domain AYJ59_01545 IPR034279 Copper resistance protein, third cupredoxin domain AYJ59_01545 IPR001117 Multicopper oxidase, type 1 AYJ59_01545 IPR006376 Copper-resistance protein CopA AYJ59_01545 IPR011707 Multicopper oxidase, type 3 AYJ59_01545 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_01545 IPR033138 Multicopper oxidases, conserved site AYJ59_01550 IPR007939 Copper resistance B precursor AYJ59_01560 IPR011706 Multicopper oxidase, type 2 AYJ59_01560 IPR011707 Multicopper oxidase, type 3 AYJ59_01560 IPR002355 Multicopper oxidase, copper-binding site AYJ59_01560 IPR008972 Cupredoxin AYJ59_01560 IPR033138 Multicopper oxidases, conserved site AYJ59_01575 IPR003593 AAA+ ATPase domain AYJ59_01575 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_01575 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_01575 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_01575 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01575 IPR009057 Homeobox-like domain superfamily AYJ59_01575 IPR029016 GAF-like domain superfamily AYJ59_01575 IPR003018 GAF domain AYJ59_01580 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_01585 IPR035906 MetI-like superfamily AYJ59_01585 IPR005889 Nitrate transport permease AYJ59_01585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_01590 IPR005890 Nitrate transport ATP-binding subunit C/D AYJ59_01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01590 IPR017871 ABC transporter, conserved site AYJ59_01590 IPR003593 AAA+ ATPase domain AYJ59_01590 IPR003439 ABC transporter-like AYJ59_01595 IPR008076 Cyanate hydratase AYJ59_01595 IPR003712 Cyanate lyase, C-terminal AYJ59_01595 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AYJ59_01595 IPR036581 Cyanate lyase, C-terminal domain superfamily AYJ59_01600 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_01600 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_01600 IPR003660 HAMP domain AYJ59_01600 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_01600 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_01600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_01620 IPR001775 GspD/PilQ family AYJ59_01620 IPR007055 BON domain AYJ59_01620 IPR032789 Pilus formation protein, N-terminal AYJ59_01620 IPR004846 Type II/III secretion system AYJ59_01620 IPR014004 Transport-associated and nodulation domain, bacteria AYJ59_01630 IPR022399 Helicase/secretion neighbourhood ATPase AYJ59_01630 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01630 IPR001482 Type II/IV secretion system protein AYJ59_01680 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX AYJ59_01680 IPR011761 ATP-grasp fold AYJ59_01680 IPR013651 ATP-grasp fold, RimK-type AYJ59_01680 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_01680 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AYJ59_01680 IPR041107 RimK, PreATP-grasp domain AYJ59_01685 IPR038076 MgtE, N-terminal domain superfamily AYJ59_01685 IPR006668 Magnesium transporter, MgtE intracellular domain AYJ59_01685 IPR000644 CBS domain AYJ59_01685 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AYJ59_01685 IPR006667 SLC41 divalent cation transporters, integral membrane domain AYJ59_01685 IPR006669 Magnesium transporter MgtE AYJ59_01685 IPR038048 Magnesium transporter MgtE, transmembrane domain AYJ59_01690 IPR003680 Flavodoxin-like fold AYJ59_01690 IPR029039 Flavoprotein-like superfamily AYJ59_01690 IPR023048 NADH-azoreductase, FMN-dependent AYJ59_01695 IPR007862 Adenylate kinase, active site lid domain AYJ59_01695 IPR006259 Adenylate kinase subfamily AYJ59_01695 IPR000850 Adenylate kinase/UMP-CMP kinase AYJ59_01695 IPR033690 Adenylate kinase, conserved site AYJ59_01695 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01705 IPR001460 Penicillin-binding protein, transpeptidase AYJ59_01705 IPR023346 Lysozyme-like domain superfamily AYJ59_01705 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_01705 IPR001264 Glycosyl transferase, family 51 AYJ59_01705 IPR036950 Penicillin binding protein transglycosylase domain AYJ59_01705 IPR031376 Penicillin-binding protein, OB-like domain AYJ59_01715 IPR002771 Multiple antibiotic resistance (MarC)-related AYJ59_01720 IPR013551 Domain of unknown function DUF1732 AYJ59_01720 IPR013527 YicC-like, N-terminal AYJ59_01720 IPR005229 Conserved hypothetical protein CHP00255 AYJ59_01725 IPR027408 PNPase/RNase PH domain superfamily AYJ59_01725 IPR036345 Exoribonuclease, PH domain 2 superfamily AYJ59_01725 IPR015847 Exoribonuclease, phosphorolytic domain 2 AYJ59_01725 IPR001247 Exoribonuclease, phosphorolytic domain 1 AYJ59_01725 IPR002381 Ribonuclease PH, bacterial-type AYJ59_01725 IPR018336 Ribonuclease PH, conserved site AYJ59_01725 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_01730 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ59_01730 IPR020922 dITP/XTP pyrophosphatase AYJ59_01730 IPR002637 Ham1-like protein AYJ59_01740 IPR005892 Glycine betaine transport ATP-binding subunit AYJ59_01740 IPR003593 AAA+ ATPase domain AYJ59_01740 IPR003439 ABC transporter-like AYJ59_01740 IPR017871 ABC transporter, conserved site AYJ59_01740 IPR000644 CBS domain AYJ59_01740 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01745 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B AYJ59_01750 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B AYJ59_01765 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AYJ59_01765 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_01765 IPR012675 Beta-grasp domain superfamily AYJ59_01765 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AYJ59_01765 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_01765 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_01765 IPR036010 2Fe-2S ferredoxin-like superfamily AYJ59_01765 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AYJ59_01765 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_01770 IPR037493 Exodeoxyribonuclease III-like AYJ59_01770 IPR005135 Endonuclease/exonuclease/phosphatase AYJ59_01770 IPR020847 AP endonuclease 1, binding site AYJ59_01770 IPR004808 AP endonuclease 1 AYJ59_01770 IPR020848 AP endonuclease 1, conserved site AYJ59_01770 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AYJ59_01775 IPR036477 Formyl transferase, N-terminal domain superfamily AYJ59_01775 IPR002376 Formyl transferase, N-terminal AYJ59_01775 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AYJ59_01775 IPR002912 ACT domain AYJ59_01775 IPR004810 Formyltetrahydrofolate deformylase AYJ59_01785 IPR014171 TonB system transport protein ExbD type-2 AYJ59_01785 IPR003400 Biopolymer transport protein ExbD/TolR AYJ59_01790 IPR014172 TonB-system energizer ExbB type-2 AYJ59_01790 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_01795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01795 IPR007807 Helicase domain AYJ59_01795 IPR038321 TmcA, C-terminal domain superfamily AYJ59_01795 IPR032672 TmcA/NAT10/Kre33 AYJ59_01795 IPR000182 GNAT domain AYJ59_01795 IPR016181 Acyl-CoA N-acyltransferase AYJ59_01795 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal AYJ59_01795 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain AYJ59_01795 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA AYJ59_01805 IPR035965 PAS domain superfamily AYJ59_01805 IPR029787 Nucleotide cyclase AYJ59_01805 IPR013656 PAS fold-4 AYJ59_01805 IPR035919 EAL domain superfamily AYJ59_01805 IPR001633 EAL domain AYJ59_01805 IPR000014 PAS domain AYJ59_01805 IPR000160 GGDEF domain AYJ59_01810 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AYJ59_01810 IPR017937 Thioredoxin, conserved site AYJ59_01810 IPR013740 Redoxin AYJ59_01810 IPR013766 Thioredoxin domain AYJ59_01810 IPR036249 Thioredoxin-like superfamily AYJ59_01820 IPR042252 MtfA, N-terminal AYJ59_01820 IPR010384 MtfA family AYJ59_01820 IPR024079 Metallopeptidase, catalytic domain superfamily AYJ59_01825 IPR010499 Bacterial transcription activator, effector binding AYJ59_01825 IPR011256 Regulatory factor, effector binding domain superfamily AYJ59_01825 IPR029442 GyrI-like small molecule binding domain AYJ59_01830 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_01830 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_01830 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_01830 IPR003660 HAMP domain AYJ59_01830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_01830 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_01835 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ59_01835 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AYJ59_01835 IPR012782 Acetolactate synthase, catabolic AYJ59_01835 IPR012000 Thiamine pyrophosphate enzyme, central domain AYJ59_01835 IPR029061 Thiamin diphosphate-binding fold AYJ59_01835 IPR000399 TPP-binding enzyme, conserved site AYJ59_01835 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AYJ59_01850 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AYJ59_01850 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AYJ59_01850 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AYJ59_01850 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AYJ59_01860 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AYJ59_01860 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_01860 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AYJ59_01860 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AYJ59_01860 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AYJ59_01860 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AYJ59_01860 IPR011281 Succinate dehydrogenase, flavoprotein subunit AYJ59_01860 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AYJ59_01865 IPR012675 Beta-grasp domain superfamily AYJ59_01865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_01865 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AYJ59_01865 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AYJ59_01865 IPR009051 Alpha-helical ferredoxin AYJ59_01865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_01865 IPR036010 2Fe-2S ferredoxin-like superfamily AYJ59_01865 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AYJ59_01875 IPR009057 Homeobox-like domain superfamily AYJ59_01875 IPR018060 DNA binding HTH domain, AraC-type AYJ59_01875 IPR018062 HTH domain AraC-type, conserved site AYJ59_01885 IPR001466 Beta-lactamase-related AYJ59_01885 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_01890 IPR035919 EAL domain superfamily AYJ59_01890 IPR029787 Nucleotide cyclase AYJ59_01890 IPR001633 EAL domain AYJ59_01890 IPR005330 MHYT domain AYJ59_01890 IPR000160 GGDEF domain AYJ59_01915 IPR005226 UPF0014 family AYJ59_01920 IPR003846 Protein adenylyltransferase SelO AYJ59_01935 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AYJ59_01935 IPR016066 Alpha-D-phosphohexomutase, conserved site AYJ59_01935 IPR005852 Phosphoglucomutase, alpha-D-glucose specific AYJ59_01935 IPR005843 Alpha-D-phosphohexomutase, C-terminal AYJ59_01935 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AYJ59_01935 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AYJ59_01935 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AYJ59_01935 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AYJ59_01945 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_01945 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_01945 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_01945 IPR012910 TonB-dependent receptor, plug domain AYJ59_01950 IPR018253 DnaJ domain, conserved site AYJ59_01950 IPR023859 DNA-binding protein, curved-DNA AYJ59_01950 IPR002939 Chaperone DnaJ, C-terminal AYJ59_01950 IPR001623 DnaJ domain AYJ59_01950 IPR008971 HSP40/DnaJ peptide-binding AYJ59_01950 IPR036869 Chaperone J-domain superfamily AYJ59_01970 IPR018389 TRAP transporter solute receptor DctP/TeaA AYJ59_01970 IPR026289 Solute binding protein, TakP-like AYJ59_01970 IPR041722 Alpha-keto acid binding periplasmic protein AYJ59_01970 IPR038404 TRAP transporter solute receptor DctP superfamily AYJ59_01980 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_01980 IPR002142 Peptidase S49 AYJ59_01980 IPR004635 Peptidase S49, SppA AYJ59_01985 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_01985 IPR003660 HAMP domain AYJ59_01985 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_01985 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_01985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_01985 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_01990 IPR014014 RNA helicase, DEAD-box type, Q motif AYJ59_01990 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ59_01990 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_01990 IPR034415 CsdA, RNA recognition motif AYJ59_01990 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AYJ59_01990 IPR001650 Helicase, C-terminal AYJ59_01990 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_01990 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AYJ59_01990 IPR028618 ATP-dependent RNA helicase DeaD AYJ59_01990 IPR011545 DEAD/DEAH box helicase domain AYJ59_01995 IPR005330 MHYT domain AYJ59_01995 IPR001633 EAL domain AYJ59_01995 IPR029787 Nucleotide cyclase AYJ59_01995 IPR000160 GGDEF domain AYJ59_01995 IPR035919 EAL domain superfamily AYJ59_02000 IPR004681 TRAP transporter large membrane protein DctM AYJ59_02000 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AYJ59_02020 IPR008778 Pirin, C-terminal domain AYJ59_02020 IPR011051 RmlC-like cupin domain superfamily AYJ59_02020 IPR014710 RmlC-like jelly roll fold AYJ59_02020 IPR012093 Pirin AYJ59_02020 IPR003829 Pirin, N-terminal domain AYJ59_02025 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02025 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02025 IPR000847 Transcription regulator HTH, LysR AYJ59_02025 IPR005119 LysR, substrate-binding AYJ59_02030 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_02030 IPR006143 RND efflux pump, membrane fusion protein AYJ59_02035 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_02035 IPR001036 Acriflavin resistance protein AYJ59_02040 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AYJ59_02040 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_02040 IPR003660 HAMP domain AYJ59_02040 IPR000727 Target SNARE coiled-coil homology domain AYJ59_02040 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_02050 IPR005524 Predicted permease DUF318 AYJ59_02060 IPR001650 Helicase, C-terminal AYJ59_02060 IPR010997 HRDC-like superfamily AYJ59_02060 IPR002121 HRDC domain AYJ59_02060 IPR004589 DNA helicase, ATP-dependent, RecQ type AYJ59_02060 IPR011545 DEAD/DEAH box helicase domain AYJ59_02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02060 IPR018982 RQC domain AYJ59_02060 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02060 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_02060 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AYJ59_02060 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AYJ59_02085 IPR003791 Protein of unknown function UPF0178 AYJ59_02090 IPR000160 GGDEF domain AYJ59_02090 IPR005330 MHYT domain AYJ59_02090 IPR001633 EAL domain AYJ59_02090 IPR029787 Nucleotide cyclase AYJ59_02090 IPR035919 EAL domain superfamily AYJ59_02095 IPR033416 Periplasmic sensor domain CHASE7 AYJ59_02095 IPR029787 Nucleotide cyclase AYJ59_02095 IPR000160 GGDEF domain AYJ59_02100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_02100 IPR007536 Ribosomal RNA small subunit methyltransferase J AYJ59_02105 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ59_02105 IPR023026 Tryptophan synthase beta chain/beta chain-like AYJ59_02105 IPR006653 Tryptophan synthase, beta chain, conserved site AYJ59_02105 IPR006654 Tryptophan synthase, beta chain AYJ59_02105 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ59_02110 IPR036895 Uracil-DNA glycosylase-like domain superfamily AYJ59_02110 IPR005122 Uracil-DNA glycosylase-like AYJ59_02115 IPR004839 Aminotransferase, class I/classII AYJ59_02115 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_02115 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_02115 IPR000524 Transcription regulator HTH, GntR AYJ59_02115 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_02120 IPR005163 3-alpha domain AYJ59_02120 IPR011037 Pyruvate kinase-like, insert domain superfamily AYJ59_02120 IPR005302 Molybdenum cofactor sulfurase, C-terminal AYJ59_02135 IPR010101 TonB-dependent vitamin B12 transporter BtuB AYJ59_02135 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_02135 IPR010916 TonB box, conserved site AYJ59_02135 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_02135 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_02135 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_02135 IPR010917 TonB-dependent receptor, conserved site AYJ59_02135 IPR012910 TonB-dependent receptor, plug domain AYJ59_02155 IPR005116 Transport-associated OB, type 1 AYJ59_02155 IPR004606 Molybdenum-pterin binding AYJ59_02155 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_02160 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AYJ59_02160 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AYJ59_02160 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AYJ59_02160 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AYJ59_02160 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AYJ59_02160 IPR006242 Putative pyrophosphorylase ModD AYJ59_02160 IPR013785 Aldolase-type TIM barrel AYJ59_02165 IPR017871 ABC transporter, conserved site AYJ59_02165 IPR003593 AAA+ ATPase domain AYJ59_02165 IPR003439 ABC transporter-like AYJ59_02165 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02190 IPR024474 Zinc-finger binding domain of transposase IS66 AYJ59_02190 IPR004291 Transposase, IS66 AYJ59_02190 IPR039552 Transposase IS66, C-terminal AYJ59_02190 IPR024463 Transposase TnpC, homeodomain AYJ59_02200 IPR041236 Primosomal protein N, C-terminal domain AYJ59_02200 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily AYJ59_02200 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02200 IPR001650 Helicase, C-terminal AYJ59_02200 IPR005259 Primosomal protein N' AYJ59_02200 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_02200 IPR011545 DEAD/DEAH box helicase domain AYJ59_02200 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain AYJ59_02200 IPR041222 Primosomal protein N', 3' DNA-binding domain AYJ59_02230 IPR013216 Methyltransferase type 11 AYJ59_02230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_02230 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AYJ59_02235 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_02235 IPR029058 Alpha/Beta hydrolase fold AYJ59_02235 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AYJ59_02240 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AYJ59_02240 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AYJ59_02240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_02240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_02240 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_02240 IPR004839 Aminotransferase, class I/classII AYJ59_02240 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AYJ59_02245 IPR010722 Biotin and thiamin synthesis-associated domain AYJ59_02245 IPR007197 Radical SAM AYJ59_02245 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AYJ59_02245 IPR013785 Aldolase-type TIM barrel AYJ59_02245 IPR024177 Biotin synthase AYJ59_02245 IPR006638 Elp3/MiaB/NifB AYJ59_02250 IPR000836 Phosphoribosyltransferase domain AYJ59_02250 IPR029057 Phosphoribosyltransferase-like AYJ59_02250 IPR005222 Competence protein ComF AYJ59_02260 IPR012341 Six-hairpin glycosidase-like superfamily AYJ59_02260 IPR004879 Domain of unknown function DUF255 AYJ59_02260 IPR024705 Spermatogenesis-associated protein 20 AYJ59_02260 IPR036249 Thioredoxin-like superfamily AYJ59_02260 IPR008928 Six-hairpin glycosidase superfamily AYJ59_02265 IPR002033 Sec-independent periplasmic protein translocase TatC AYJ59_02265 IPR019820 Sec-independent periplasmic protein translocase, conserved site AYJ59_02270 IPR003369 Sec-independent protein translocase protein TatA/B/E AYJ59_02270 IPR018448 Twin-arginine translocation protein TatB AYJ59_02275 IPR003369 Sec-independent protein translocase protein TatA/B/E AYJ59_02275 IPR006312 Sec-independent protein translocase protein TatA/E AYJ59_02280 IPR036265 HIT-like superfamily AYJ59_02280 IPR011146 HIT-like domain AYJ59_02280 IPR001310 Histidine triad (HIT) protein AYJ59_02280 IPR019808 Histidine triad, conserved site AYJ59_02285 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AYJ59_02285 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AYJ59_02290 IPR013785 Aldolase-type TIM barrel AYJ59_02290 IPR006062 Histidine biosynthesis AYJ59_02290 IPR011060 Ribulose-phosphate binding barrel AYJ59_02290 IPR004651 Histidine biosynthesis, HisF AYJ59_02295 IPR011060 Ribulose-phosphate binding barrel AYJ59_02295 IPR001252 Malate dehydrogenase, active site AYJ59_02295 IPR013785 Aldolase-type TIM barrel AYJ59_02295 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase AYJ59_02295 IPR006062 Histidine biosynthesis AYJ59_02295 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA AYJ59_02300 IPR017926 Glutamine amidotransferase AYJ59_02300 IPR010139 Imidazole glycerol phosphate synthase, subunit H AYJ59_02300 IPR029062 Class I glutamine amidotransferase-like AYJ59_02305 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AYJ59_02305 IPR000807 Imidazoleglycerol-phosphate dehydratase AYJ59_02305 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_02305 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AYJ59_02310 IPR023616 Cytochrome c oxidase-like, subunit I domain AYJ59_02310 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AYJ59_02310 IPR000883 Cytochrome c oxidase subunit I AYJ59_02310 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AYJ59_02310 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AYJ59_02325 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AYJ59_02325 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AYJ59_02325 IPR036909 Cytochrome c-like domain superfamily AYJ59_02325 IPR008168 Cytochrome c, class IC AYJ59_02325 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AYJ59_02325 IPR009056 Cytochrome c-like domain AYJ59_02330 IPR013783 Immunoglobulin-like fold AYJ59_02330 IPR032879 FixG, C-terminal immunoglobulin-like domain AYJ59_02330 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG AYJ59_02330 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_02330 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_02340 IPR008250 P-type ATPase, A domain superfamily AYJ59_02340 IPR023298 P-type ATPase, transmembrane domain superfamily AYJ59_02340 IPR036412 HAD-like superfamily AYJ59_02340 IPR018303 P-type ATPase, phosphorylation site AYJ59_02340 IPR023299 P-type ATPase, cytoplasmic domain N AYJ59_02340 IPR023214 HAD superfamily AYJ59_02340 IPR017969 Heavy-metal-associated, conserved site AYJ59_02340 IPR036163 Heavy metal-associated domain superfamily AYJ59_02340 IPR027256 P-type ATPase, subfamily IB AYJ59_02340 IPR001757 P-type ATPase AYJ59_02340 IPR006121 Heavy metal-associated domain, HMA AYJ59_02355 IPR009051 Alpha-helical ferredoxin AYJ59_02355 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AYJ59_02355 IPR023753 FAD/NAD(P)-binding domain AYJ59_02355 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_02355 IPR028261 Dihydroprymidine dehydrogenase domain II AYJ59_02360 IPR002489 Glutamate synthase, alpha subunit, C-terminal AYJ59_02360 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_02360 IPR002932 Glutamate synthase domain AYJ59_02360 IPR006982 Glutamate synthase, central-N AYJ59_02360 IPR013785 Aldolase-type TIM barrel AYJ59_02360 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_02360 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AYJ59_02365 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent AYJ59_02365 IPR011258 BPG-independent PGAM, N-terminal AYJ59_02365 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily AYJ59_02365 IPR017850 Alkaline-phosphatase-like, core domain superfamily AYJ59_02365 IPR006124 Metalloenzyme AYJ59_02370 IPR021309 Protein of unknown function DUF2892 AYJ59_02370 IPR001763 Rhodanese-like domain AYJ59_02370 IPR036873 Rhodanese-like domain superfamily AYJ59_02375 IPR011900 Glutaredoxin, GrxC AYJ59_02375 IPR011767 Glutaredoxin active site AYJ59_02375 IPR002109 Glutaredoxin AYJ59_02375 IPR014025 Glutaredoxin subgroup AYJ59_02375 IPR036249 Thioredoxin-like superfamily AYJ59_02380 IPR003708 Bacterial protein export chaperone SecB AYJ59_02380 IPR035958 SecB-like superfamily AYJ59_02385 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AYJ59_02385 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_02385 IPR036291 NAD(P)-binding domain superfamily AYJ59_02385 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AYJ59_02385 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AYJ59_02385 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AYJ59_02390 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AYJ59_02390 IPR001537 tRNA/rRNA methyltransferase, SpoU type AYJ59_02390 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_02390 IPR029028 Alpha/beta knot methyltransferases AYJ59_02395 IPR033888 Dihydroorotate dehydrogenase, class 1B AYJ59_02395 IPR001295 Dihydroorotate dehydrogenase, conserved site AYJ59_02395 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AYJ59_02395 IPR024920 Dihydroorotate dehydrogenase, class 1 AYJ59_02395 IPR005720 Dihydroorotate dehydrogenase domain AYJ59_02395 IPR013785 Aldolase-type TIM barrel AYJ59_02400 IPR002942 RNA-binding S4 domain AYJ59_02400 IPR036986 RNA-binding S4 domain superfamily AYJ59_02400 IPR002307 Tyrosine-tRNA ligase AYJ59_02400 IPR024088 Tyrosine-tRNA ligase, bacterial-type AYJ59_02400 IPR002305 Aminoacyl-tRNA synthetase, class Ic AYJ59_02400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_02400 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 AYJ59_02400 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_02430 IPR008988 Transcriptional repressor, C-terminal AYJ59_02430 IPR030855 Bifunctional ligase/repressor BirA AYJ59_02430 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AYJ59_02430 IPR004409 Biotin operon repressor, helix-turn-helix domain AYJ59_02430 IPR003142 Biotin protein ligase, C-terminal AYJ59_02430 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02430 IPR013196 Helix-turn-helix, type 11 AYJ59_02430 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02430 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AYJ59_02435 IPR004619 Type III pantothenate kinase AYJ59_02445 IPR029069 HotDog domain superfamily AYJ59_02445 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AYJ59_02445 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AYJ59_02450 IPR016039 Thiolase-like AYJ59_02450 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ59_02450 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ59_02450 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ59_02450 IPR018201 Beta-ketoacyl synthase, active site AYJ59_02450 IPR000794 Beta-ketoacyl synthase AYJ59_02465 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AYJ59_02465 IPR003593 AAA+ ATPase domain AYJ59_02465 IPR036225 SRP/SRP receptor, N-terminal AYJ59_02465 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AYJ59_02465 IPR004390 Signal-recognition particle receptor FtsY AYJ59_02465 IPR013822 Signal recognition particle SRP54, helical bundle AYJ59_02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02470 IPR007863 Peptidase M16, C-terminal AYJ59_02470 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_02470 IPR011765 Peptidase M16, N-terminal AYJ59_02470 IPR001431 Peptidase M16, zinc-binding site AYJ59_02475 IPR007863 Peptidase M16, C-terminal AYJ59_02475 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_02480 IPR005538 LrgA/CidA family AYJ59_02480 IPR022957 Uncharacterised protein family UPF0299 AYJ59_02485 IPR005261 Conserved hypothetical protein CHP00659 AYJ59_02485 IPR007300 CidB/LrgB family AYJ59_02490 IPR000014 PAS domain AYJ59_02490 IPR000160 GGDEF domain AYJ59_02490 IPR000700 PAS-associated, C-terminal AYJ59_02490 IPR029787 Nucleotide cyclase AYJ59_02490 IPR013656 PAS fold-4 AYJ59_02490 IPR035965 PAS domain superfamily AYJ59_02505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_02505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_02505 IPR004398 RNA methyltransferase, RsmD AYJ59_02510 IPR035919 EAL domain superfamily AYJ59_02510 IPR000160 GGDEF domain AYJ59_02510 IPR005330 MHYT domain AYJ59_02510 IPR029787 Nucleotide cyclase AYJ59_02510 IPR001633 EAL domain AYJ59_02515 IPR004821 Cytidyltransferase-like domain AYJ59_02515 IPR001980 Phosphopantetheine adenylyltransferase AYJ59_02515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_02525 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_02525 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02525 IPR000847 Transcription regulator HTH, LysR AYJ59_02525 IPR005116 Transport-associated OB, type 1 AYJ59_02525 IPR004606 Molybdenum-pterin binding AYJ59_02525 IPR016462 Molybdate-dependent transcriptional regulator ModE AYJ59_02525 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02530 IPR005950 Molybdate ABC transporter, substrate-binding protein AYJ59_02535 IPR011867 Molybdate ABC transporter, permease protein AYJ59_02535 IPR035906 MetI-like superfamily AYJ59_02535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_02540 IPR011868 Molybdate ABC transporter, ATP-binding protein AYJ59_02540 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_02540 IPR004606 Molybdenum-pterin binding AYJ59_02540 IPR003593 AAA+ ATPase domain AYJ59_02540 IPR003439 ABC transporter-like AYJ59_02540 IPR005116 Transport-associated OB, type 1 AYJ59_02540 IPR017871 ABC transporter, conserved site AYJ59_02540 IPR015852 ABC transporter, molybdenum import, ModC AYJ59_02540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02545 IPR001757 P-type ATPase AYJ59_02545 IPR005782 P-type ATPase, subfamily IIA, SERCA-type AYJ59_02545 IPR023214 HAD superfamily AYJ59_02545 IPR036412 HAD-like superfamily AYJ59_02545 IPR008250 P-type ATPase, A domain superfamily AYJ59_02545 IPR023298 P-type ATPase, transmembrane domain superfamily AYJ59_02545 IPR018303 P-type ATPase, phosphorylation site AYJ59_02545 IPR023299 P-type ATPase, cytoplasmic domain N AYJ59_02545 IPR004014 Cation-transporting P-type ATPase, N-terminal AYJ59_02545 IPR006068 Cation-transporting P-type ATPase, C-terminal AYJ59_02555 IPR010979 Ribosomal protein S13-like, H2TH AYJ59_02555 IPR010663 Zinc finger, FPG/IleRS-type AYJ59_02555 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AYJ59_02555 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AYJ59_02555 IPR035937 MutM-like, N-terminal AYJ59_02555 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AYJ59_02555 IPR020629 Formamidopyrimidine-DNA glycosylase AYJ59_02565 IPR009050 Globin-like superfamily AYJ59_02565 IPR012292 Globin/Protoglobin AYJ59_02565 IPR029787 Nucleotide cyclase AYJ59_02565 IPR039435 Diguanylate cyclase DosC, globin sensor domain AYJ59_02565 IPR000160 GGDEF domain AYJ59_02570 IPR001705 Ribosomal protein L33 AYJ59_02570 IPR018264 Ribosomal protein L33, conserved site AYJ59_02570 IPR011332 Zinc-binding ribosomal protein AYJ59_02570 IPR038584 Ribosomal protein L33 superfamily AYJ59_02580 IPR010994 RuvA domain 2-like AYJ59_02580 IPR001405 Uncharacterised protein family UPF0758 AYJ59_02580 IPR025657 RadC-like JAB domain AYJ59_02580 IPR020891 Uncharacterised protein family UPF0758, conserved site AYJ59_02580 IPR037518 MPN domain AYJ59_02590 IPR003382 Flavoprotein AYJ59_02590 IPR036551 Flavin prenyltransferase-like AYJ59_02590 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AYJ59_02590 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AYJ59_02590 IPR035929 CoaB-like superfamily AYJ59_02600 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_02600 IPR011006 CheY-like superfamily AYJ59_02600 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_02600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_02600 IPR005467 Histidine kinase domain AYJ59_02600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_02600 IPR035965 PAS domain superfamily AYJ59_02600 IPR015387 LuxQ, periplasmic AYJ59_02600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_02600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_02600 IPR001789 Signal transduction response regulator, receiver domain AYJ59_02605 IPR011006 CheY-like superfamily AYJ59_02605 IPR003607 HD/PDEase domain AYJ59_02605 IPR037522 HD-GYP domain AYJ59_02605 IPR001789 Signal transduction response regulator, receiver domain AYJ59_02615 IPR018093 BCCT transporter, conserved site AYJ59_02615 IPR000060 BCCT transporter family AYJ59_02625 IPR029054 dUTPase-like AYJ59_02625 IPR036157 dUTPase-like superfamily AYJ59_02625 IPR033704 dUTPase, trimeric AYJ59_02625 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AYJ59_02630 IPR005843 Alpha-D-phosphohexomutase, C-terminal AYJ59_02630 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AYJ59_02630 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AYJ59_02630 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AYJ59_02630 IPR005841 Alpha-D-phosphohexomutase superfamily AYJ59_02630 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AYJ59_02630 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AYJ59_02630 IPR016066 Alpha-D-phosphohexomutase, conserved site AYJ59_02640 IPR004839 Aminotransferase, class I/classII AYJ59_02640 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AYJ59_02640 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_02640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_02640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_02645 IPR007551 Protein of unknown function DUF520 AYJ59_02645 IPR035570 UPF0234, N-terminal AYJ59_02645 IPR036183 YajQ-like superfamily AYJ59_02645 IPR035571 UPF0234-like, C-terminal AYJ59_02660 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AYJ59_02660 IPR001057 Glutamate/acetylglutamate kinase AYJ59_02660 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_02660 IPR004662 Acetylglutamate kinase family AYJ59_02660 IPR037528 Acetylglutamate kinase ArgB AYJ59_02660 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_02670 IPR035965 PAS domain superfamily AYJ59_02670 IPR000014 PAS domain AYJ59_02670 IPR001610 PAC motif AYJ59_02670 IPR003660 HAMP domain AYJ59_02670 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_02670 IPR013655 PAS fold-3 AYJ59_02670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_02670 IPR013655 PAS fold-3 AYJ59_02670 IPR001610 PAC motif AYJ59_02670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_02670 IPR003660 HAMP domain AYJ59_02670 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_02670 IPR035965 PAS domain superfamily AYJ59_02670 IPR000014 PAS domain AYJ59_02690 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_02690 IPR029039 Flavoprotein-like superfamily AYJ59_02690 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_02690 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AYJ59_02690 IPR008254 Flavodoxin/nitric oxide synthase AYJ59_02690 IPR001094 Flavodoxin-like AYJ59_02690 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AYJ59_02690 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_02690 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AYJ59_02690 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AYJ59_02690 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AYJ59_02690 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_02695 IPR003695 Ppx/GppA phosphatase AYJ59_02695 IPR030673 Pyrophosphatase, GppA/Ppx-type AYJ59_02695 IPR022371 Exopolyphosphatase AYJ59_02700 IPR036830 Polyphosphate kinase middle domain superfamily AYJ59_02700 IPR025200 Polyphosphate kinase C-terminal domain 2 AYJ59_02700 IPR003414 Polyphosphate kinase AYJ59_02700 IPR024953 Polyphosphate kinase middle domain AYJ59_02700 IPR025198 Polyphosphate kinase N-terminal domain AYJ59_02700 IPR041108 Polyphosphate kinase, C-terminal domain 1 AYJ59_02700 IPR036832 Polyphosphate kinase N-terminal domain superfamily AYJ59_02705 IPR002696 Putative membrane protein insertion efficiency factor AYJ59_02710 IPR006680 Amidohydrolase-related AYJ59_02710 IPR004722 Dihydroorotase AYJ59_02710 IPR002195 Dihydroorotase, conserved site AYJ59_02710 IPR011059 Metal-dependent hydrolase, composite domain superfamily AYJ59_02710 IPR032466 Metal-dependent hydrolase AYJ59_02720 IPR001633 EAL domain AYJ59_02720 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AYJ59_02720 IPR035919 EAL domain superfamily AYJ59_02720 IPR013976 Metal-dependent hydrolase HDOD AYJ59_02725 IPR016163 Aldehyde dehydrogenase, C-terminal AYJ59_02725 IPR016162 Aldehyde dehydrogenase, N-terminal AYJ59_02725 IPR016161 Aldehyde/histidinol dehydrogenase AYJ59_02725 IPR015590 Aldehyde dehydrogenase domain AYJ59_02740 IPR009057 Homeobox-like domain superfamily AYJ59_02740 IPR001647 DNA-binding HTH domain, TetR-type AYJ59_02740 IPR041646 IcaR, C-terminal AYJ59_02745 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_02745 IPR001036 Acriflavin resistance protein AYJ59_02750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_02755 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ59_02755 IPR001650 Helicase, C-terminal AYJ59_02755 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_02755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02755 IPR014014 RNA helicase, DEAD-box type, Q motif AYJ59_02755 IPR011545 DEAD/DEAH box helicase domain AYJ59_02755 IPR028621 ATP-dependent RNA helicase SrmB AYJ59_02760 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal AYJ59_02760 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily AYJ59_02760 IPR031100 LOG family AYJ59_02760 IPR021826 Domain of unknown function DUF3412 AYJ59_02765 IPR002549 Transmembrane protein TqsA-like AYJ59_02775 IPR035919 EAL domain superfamily AYJ59_02775 IPR001633 EAL domain AYJ59_02775 IPR029787 Nucleotide cyclase AYJ59_02775 IPR000160 GGDEF domain AYJ59_02775 IPR005330 MHYT domain AYJ59_02785 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AYJ59_02785 IPR013785 Aldolase-type TIM barrel AYJ59_02785 IPR005668 2-isopropylmalate synthase AYJ59_02785 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AYJ59_02785 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AYJ59_02785 IPR000891 Pyruvate carboxyltransferase AYJ59_02785 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AYJ59_02790 IPR011008 Dimeric alpha-beta barrel AYJ59_02790 IPR000485 AsnC-type HTH domain AYJ59_02790 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ59_02790 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AYJ59_02790 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02790 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02790 IPR011991 ArsR-like helix-turn-helix domain AYJ59_02790 IPR019888 Transcription regulator AsnC-type AYJ59_02795 IPR000060 BCCT transporter family AYJ59_02795 IPR018093 BCCT transporter, conserved site AYJ59_02800 IPR003801 GTP cyclohydrolase FolE2/MptA AYJ59_02800 IPR022838 GTP cyclohydrolase FolE2 AYJ59_02805 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ59_02805 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ59_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_02810 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_02810 IPR006231 Malate:quinone-oxidoreductase AYJ59_02815 IPR011991 ArsR-like helix-turn-helix domain AYJ59_02815 IPR001845 HTH ArsR-type DNA-binding domain AYJ59_02815 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_02815 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_02830 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AYJ59_02830 IPR036291 NAD(P)-binding domain superfamily AYJ59_02830 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AYJ59_02830 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AYJ59_02830 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AYJ59_02830 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AYJ59_02840 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_02840 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_02840 IPR036291 NAD(P)-binding domain superfamily AYJ59_02845 IPR019772 Ferrochelatase, active site AYJ59_02845 IPR001015 Ferrochelatase AYJ59_02845 IPR033659 Ferrochelatase, N-terminal AYJ59_02845 IPR033644 Ferrochelatase, C-terminal AYJ59_02855 IPR012156 Cold shock, CspA AYJ59_02855 IPR011129 Cold shock domain AYJ59_02855 IPR002059 Cold-shock protein, DNA-binding AYJ59_02855 IPR012340 Nucleic acid-binding, OB-fold AYJ59_02855 IPR019844 Cold-shock (CSD) domain AYJ59_02860 IPR004810 Formyltetrahydrofolate deformylase AYJ59_02860 IPR036477 Formyl transferase, N-terminal domain superfamily AYJ59_02860 IPR002376 Formyl transferase, N-terminal AYJ59_02860 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AYJ59_02860 IPR002912 ACT domain AYJ59_02865 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_02865 IPR006076 FAD dependent oxidoreductase AYJ59_02865 IPR006278 Sarcosine oxidase subunit beta AYJ59_02875 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AYJ59_02875 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AYJ59_02875 IPR041117 SoxA, A3 domain AYJ59_02875 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AYJ59_02875 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AYJ59_02875 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_02875 IPR023753 FAD/NAD(P)-binding domain AYJ59_02875 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AYJ59_02875 IPR006222 Aminomethyltransferase, folate-binding domain AYJ59_02875 IPR006277 Sarcosine oxidase, alpha subunit AYJ59_02885 IPR027303 Glutamine synthetase, glycine-rich site AYJ59_02885 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_02885 IPR036651 Glutamine synthetase, N-terminal domain superfamily AYJ59_02885 IPR017536 Glutamine synthetase, type III AYJ59_02885 IPR008146 Glutamine synthetase, catalytic domain AYJ59_02890 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_02890 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_02895 IPR002489 Glutamate synthase, alpha subunit, C-terminal AYJ59_02895 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AYJ59_02895 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein AYJ59_02900 IPR002932 Glutamate synthase domain AYJ59_02900 IPR013785 Aldolase-type TIM barrel AYJ59_02900 IPR024188 Glutamate synthase large subunit-like protein AYJ59_02905 IPR036291 NAD(P)-binding domain superfamily AYJ59_02905 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYJ59_02905 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AYJ59_02905 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AYJ59_02905 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYJ59_02910 IPR001674 GMP synthase, C-terminal AYJ59_02910 IPR017926 Glutamine amidotransferase AYJ59_02910 IPR025777 GMP synthetase ATP pyrophosphatase domain AYJ59_02910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_02910 IPR022955 GMP synthase AYJ59_02910 IPR029062 Class I glutamine amidotransferase-like AYJ59_02910 IPR004739 GMP synthase, glutamine amidotransferase AYJ59_02915 IPR000182 GNAT domain AYJ59_02915 IPR017813 Mycothiol acetyltransferase AYJ59_02915 IPR016181 Acyl-CoA N-acyltransferase AYJ59_02920 IPR029020 Ammonium/urea transporter AYJ59_02920 IPR001905 Ammonium transporter AYJ59_02920 IPR018047 Ammonium transporter, conserved site AYJ59_02920 IPR024041 Ammonium transporter AmtB-like domain AYJ59_02925 IPR017918 Nitrogen regulatory protein PII, conserved site AYJ59_02925 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ59_02925 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ59_02925 IPR002332 Nitrogen regulatory protein P-II, urydylation site AYJ59_02925 IPR002187 Nitrogen regulatory protein PII AYJ59_02940 IPR015795 Pyruvate kinase, C-terminal AYJ59_02940 IPR018209 Pyruvate kinase, active site AYJ59_02940 IPR001697 Pyruvate kinase AYJ59_02940 IPR036918 Pyruvate kinase, C-terminal domain superfamily AYJ59_02940 IPR040442 Pyruvate kinase-like domain superfamily AYJ59_02940 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_02940 IPR015806 Pyruvate kinase, insert domain superfamily AYJ59_02940 IPR011037 Pyruvate kinase-like, insert domain superfamily AYJ59_02940 IPR015793 Pyruvate kinase, barrel AYJ59_02945 IPR000160 GGDEF domain AYJ59_02945 IPR029787 Nucleotide cyclase AYJ59_02945 IPR033424 Membrane-associated sensor domain AYJ59_02950 IPR002930 Glycine cleavage system H-protein AYJ59_02950 IPR011053 Single hybrid motif AYJ59_02950 IPR000089 Biotin/lipoyl attachment AYJ59_02950 IPR017453 Glycine cleavage system H-protein, subgroup AYJ59_02950 IPR033753 Glycine cleavage system H-protein/Simiate AYJ59_02950 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AYJ59_02955 IPR002478 PUA domain AYJ59_02955 IPR015947 PUA-like superfamily AYJ59_02955 IPR036974 PUA domain superfamily AYJ59_02955 IPR023542 rRNA large subunit methyltransferase I AYJ59_02955 IPR019614 S-adenosylmethionine-dependent methyltransferase AYJ59_02955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_02955 IPR041532 RlmI, PUA-like domain AYJ59_02965 IPR000183 Ornithine/DAP/Arg decarboxylase AYJ59_02965 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AYJ59_02965 IPR029066 PLP-binding barrel AYJ59_02965 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AYJ59_02965 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AYJ59_02965 IPR002986 Diaminopimelate decarboxylase, LysA AYJ59_02965 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AYJ59_02965 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AYJ59_02975 IPR003140 Phospholipase/carboxylesterase/thioesterase AYJ59_02975 IPR029058 Alpha/Beta hydrolase fold AYJ59_03000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03000 IPR003373 Ferrous iron transport protein B AYJ59_03000 IPR011640 Ferrous iron transport protein B, C-terminal AYJ59_03000 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AYJ59_03000 IPR006073 GTP binding domain AYJ59_03000 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AYJ59_03010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_03010 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_03010 IPR008220 Homoserine/serine acetyltransferase MetX-like AYJ59_03010 IPR029058 Alpha/Beta hydrolase fold AYJ59_03010 IPR010743 Methionine biosynthesis MetW AYJ59_03015 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_03015 IPR029058 Alpha/Beta hydrolase fold AYJ59_03015 IPR008220 Homoserine/serine acetyltransferase MetX-like AYJ59_03020 IPR003425 CCB3/YggT AYJ59_03025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_03025 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AYJ59_03025 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AYJ59_03025 IPR000304 Pyrroline-5-carboxylate reductase AYJ59_03025 IPR036291 NAD(P)-binding domain superfamily AYJ59_03030 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AYJ59_03030 IPR036291 NAD(P)-binding domain superfamily AYJ59_03030 IPR033524 Leu/Phe/Val dehydrogenases active site AYJ59_03030 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AYJ59_03030 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AYJ59_03030 IPR014362 Glutamate dehydrogenase AYJ59_03030 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AYJ59_03035 IPR013655 PAS fold-3 AYJ59_03035 IPR035965 PAS domain superfamily AYJ59_03035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03035 IPR003660 HAMP domain AYJ59_03035 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03035 IPR013655 PAS fold-3 AYJ59_03035 IPR035965 PAS domain superfamily AYJ59_03035 IPR000014 PAS domain AYJ59_03035 IPR001610 PAC motif AYJ59_03035 IPR000014 PAS domain AYJ59_03035 IPR001610 PAC motif AYJ59_03035 IPR003660 HAMP domain AYJ59_03035 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03045 IPR011078 Pyridoxal phosphate homeostasis protein AYJ59_03045 IPR029066 PLP-binding barrel AYJ59_03045 IPR001608 Alanine racemase, N-terminal AYJ59_03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03050 IPR022486 Polyphosphate kinase 2, PA0141 AYJ59_03050 IPR022488 Polyphosphate kinase-2-related AYJ59_03065 IPR004722 Dihydroorotase AYJ59_03065 IPR006680 Amidohydrolase-related AYJ59_03065 IPR011059 Metal-dependent hydrolase, composite domain superfamily AYJ59_03065 IPR032466 Metal-dependent hydrolase AYJ59_03070 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AYJ59_03070 IPR002082 Aspartate carbamoyltransferase AYJ59_03070 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AYJ59_03070 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AYJ59_03070 IPR006130 Aspartate/ornithine carbamoyltransferase AYJ59_03075 IPR037027 YqgF/RNase H-like domain superfamily AYJ59_03075 IPR006641 YqgF/RNase H-like domain AYJ59_03075 IPR012337 Ribonuclease H-like superfamily AYJ59_03075 IPR005227 Putative pre-16S rRNA nuclease AYJ59_03080 IPR003774 Protein of unknown function UPF0301 AYJ59_03085 IPR024932 Flavin transferase ApbE AYJ59_03085 IPR003374 ApbE-like superfamily AYJ59_03085 IPR042159 Flavin-trafficking protein ApbE AYJ59_03090 IPR013655 PAS fold-3 AYJ59_03090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03090 IPR000014 PAS domain AYJ59_03090 IPR001610 PAC motif AYJ59_03090 IPR003660 HAMP domain AYJ59_03090 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03090 IPR013655 PAS fold-3 AYJ59_03090 IPR001610 PAC motif AYJ59_03090 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03090 IPR003660 HAMP domain AYJ59_03090 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03090 IPR035965 PAS domain superfamily AYJ59_03090 IPR035965 PAS domain superfamily AYJ59_03090 IPR000014 PAS domain AYJ59_03095 IPR004215 Prokaryotic glutathione synthetase, N-terminal AYJ59_03095 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AYJ59_03095 IPR006284 Glutathione synthetase, prokaryotic AYJ59_03095 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_03095 IPR011761 ATP-grasp fold AYJ59_03095 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_03105 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_03105 IPR006700 Ribosomal RNA small subunit methyltransferase E AYJ59_03105 IPR015947 PUA-like superfamily AYJ59_03105 IPR029028 Alpha/beta knot methyltransferases AYJ59_03110 IPR029041 FAD-linked oxidoreductase-like AYJ59_03110 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase AYJ59_03110 IPR003171 Methylenetetrahydrofolate reductase AYJ59_03110 IPR004620 5,10-methylenetetrahydrofolate reductase AYJ59_03115 IPR022628 S-adenosylmethionine synthetase, N-terminal AYJ59_03115 IPR022629 S-adenosylmethionine synthetase, central domain AYJ59_03115 IPR022630 S-adenosylmethionine synthetase, C-terminal AYJ59_03115 IPR022631 S-adenosylmethionine synthetase, conserved site AYJ59_03115 IPR002133 S-adenosylmethionine synthetase AYJ59_03115 IPR022636 S-adenosylmethionine synthetase superfamily AYJ59_03120 IPR016132 Phytochrome chromophore attachment domain AYJ59_03120 IPR003018 GAF domain AYJ59_03120 IPR035919 EAL domain superfamily AYJ59_03120 IPR001633 EAL domain AYJ59_03120 IPR000160 GGDEF domain AYJ59_03120 IPR029787 Nucleotide cyclase AYJ59_03120 IPR001294 Phytochrome AYJ59_03120 IPR029016 GAF-like domain superfamily AYJ59_03120 IPR013515 Phytochrome, central region AYJ59_03125 IPR035893 PurE domain superfamily AYJ59_03125 IPR024694 PurE, prokaryotic type AYJ59_03125 IPR000031 PurE domain AYJ59_03125 IPR033747 Class I PurE AYJ59_03130 IPR011054 Rudiment single hybrid motif AYJ59_03130 IPR011761 ATP-grasp fold AYJ59_03130 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AYJ59_03130 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_03130 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_03130 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AYJ59_03130 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AYJ59_03135 IPR029056 Ribokinase-like AYJ59_03135 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AYJ59_03135 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AYJ59_03135 IPR017953 Carbohydrate kinase, predicted, conserved site AYJ59_03135 IPR004443 YjeF N-terminal domain AYJ59_03135 IPR036652 YjeF N-terminal domain superfamily AYJ59_03140 IPR003824 Undecaprenyl-diphosphatase UppP AYJ59_03150 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AYJ59_03150 IPR032779 Flagellar motor switch protein FliG, middle domain AYJ59_03150 IPR011002 Flagellar motor switch protein FliG, alpha-helical AYJ59_03150 IPR023087 Flagellar motor switch protein FliG, C-terminal AYJ59_03150 IPR000090 Flagellar motor switch protein FliG AYJ59_03160 IPR006156 Dihydroneopterin aldolase AYJ59_03160 IPR006157 Dihydroneopterin aldolase/epimerase domain AYJ59_03165 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AYJ59_03170 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AYJ59_03170 IPR017860 Peptidase M22, conserved site AYJ59_03170 IPR017861 Kae1/TsaD family AYJ59_03170 IPR000905 Gcp-like domain AYJ59_03175 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AYJ59_03175 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AYJ59_03175 IPR019004 Uncharacterised protein YqeY/Aim41 AYJ59_03175 IPR042184 YqeY/Aim41, N-terminal domain AYJ59_03180 IPR013173 DNA primase DnaG, DnaB-binding domain AYJ59_03180 IPR006295 DNA primase, DnaG AYJ59_03180 IPR019475 DNA primase, DnaB-helicase binding domain AYJ59_03180 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AYJ59_03180 IPR013264 DNA primase, catalytic core, N-terminal AYJ59_03180 IPR030846 DNA primase DnaG, bacteria AYJ59_03180 IPR034151 Bacterial DnaG primase, TOPRIM domain AYJ59_03180 IPR006171 TOPRIM domain AYJ59_03180 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AYJ59_03180 IPR002694 Zinc finger, CHC2-type AYJ59_03180 IPR036977 DNA Primase, CHC2-type zinc finger AYJ59_03185 IPR007630 RNA polymerase sigma-70 region 4 AYJ59_03185 IPR007631 RNA polymerase sigma factor 70, non-essential domain AYJ59_03185 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AYJ59_03185 IPR042189 Sigma-70 factor, region 1.1 superfamily AYJ59_03185 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_03185 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_03185 IPR028630 RNA polymerase sigma factor RpoD AYJ59_03185 IPR007624 RNA polymerase sigma-70 region 3 AYJ59_03185 IPR007127 RNA polymerase sigma factor 70, region 1.1 AYJ59_03185 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_03185 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03185 IPR000943 RNA polymerase sigma-70 AYJ59_03185 IPR014284 RNA polymerase sigma-70 like domain AYJ59_03185 IPR009042 RNA polymerase sigma-70 region 1.2 AYJ59_03200 IPR000160 GGDEF domain AYJ59_03200 IPR033424 Membrane-associated sensor domain AYJ59_03200 IPR029787 Nucleotide cyclase AYJ59_03225 IPR027939 NMT1/THI5 family AYJ59_03225 IPR015168 SsuA/THI5-like AYJ59_03230 IPR023871 Mycofactocin system creatininase family protein AYJ59_03230 IPR003785 Creatininase/formamide hydrolase AYJ59_03230 IPR024087 Creatininase-like superfamily AYJ59_03235 IPR036651 Glutamine synthetase, N-terminal domain superfamily AYJ59_03235 IPR008146 Glutamine synthetase, catalytic domain AYJ59_03235 IPR027303 Glutamine synthetase, glycine-rich site AYJ59_03235 IPR017536 Glutamine synthetase, type III AYJ59_03235 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_03240 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_03240 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AYJ59_03240 IPR037171 NagB/RpiA transferase-like AYJ59_03240 IPR001034 DeoR-type HTH domain AYJ59_03240 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03240 IPR014036 DeoR C-terminal sensor domain AYJ59_03250 IPR017871 ABC transporter, conserved site AYJ59_03250 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_03250 IPR003439 ABC transporter-like AYJ59_03250 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AYJ59_03250 IPR013611 Transport-associated OB, type 2 AYJ59_03250 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AYJ59_03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03250 IPR003593 AAA+ ATPase domain AYJ59_03255 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_03255 IPR035906 MetI-like superfamily AYJ59_03260 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_03260 IPR035906 MetI-like superfamily AYJ59_03270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_03270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_03270 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_03270 IPR017747 Putrescine aminotransferase AYJ59_03270 IPR005814 Aminotransferase class-III AYJ59_03275 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AYJ59_03275 IPR036291 NAD(P)-binding domain superfamily AYJ59_03275 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_03275 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_03280 IPR004304 Acetamidase/Formamidase AYJ59_03285 IPR010628 Ethanolamine ammonia lyase large subunit AYJ59_03285 IPR013785 Aldolase-type TIM barrel AYJ59_03290 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal AYJ59_03290 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal AYJ59_03290 IPR009246 Ethanolamine ammonia-lyase light chain AYJ59_03295 IPR013780 Glycosyl hydrolase, all-beta AYJ59_03295 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AYJ59_03295 IPR017853 Glycoside hydrolase superfamily AYJ59_03300 IPR029056 Ribokinase-like AYJ59_03300 IPR002139 Ribokinase/fructokinase AYJ59_03300 IPR011611 Carbohydrate kinase PfkB AYJ59_03300 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AYJ59_03305 IPR038068 YcgL-like superfamily AYJ59_03305 IPR027354 YcgL domain AYJ59_03305 IPR006380 Sucrose-phosphatase-like, N-terminal AYJ59_03305 IPR023214 HAD superfamily AYJ59_03305 IPR006379 HAD-superfamily hydrolase, subfamily IIB AYJ59_03305 IPR036412 HAD-like superfamily AYJ59_03310 IPR012820 Sucrose synthase, plant/cyanobacteria AYJ59_03310 IPR000368 Sucrose synthase AYJ59_03310 IPR001296 Glycosyl transferase, family 1 AYJ59_03325 IPR036928 Amidase signature (AS) superfamily AYJ59_03325 IPR014085 Allophanate hydrolase AYJ59_03325 IPR023631 Amidase signature domain AYJ59_03330 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_03330 IPR011761 ATP-grasp fold AYJ59_03330 IPR011764 Biotin carboxylation domain AYJ59_03330 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AYJ59_03330 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_03330 IPR011054 Rudiment single hybrid motif AYJ59_03330 IPR005482 Biotin carboxylase, C-terminal AYJ59_03330 IPR005481 Biotin carboxylase-like, N-terminal domain AYJ59_03335 IPR018959 Protein of unknown function DUF1989 AYJ59_03350 IPR003593 AAA+ ATPase domain AYJ59_03350 IPR003439 ABC transporter-like AYJ59_03350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_03355 IPR035906 MetI-like superfamily AYJ59_03365 IPR023801 Histone deacetylase domain AYJ59_03365 IPR000286 Histone deacetylase family AYJ59_03365 IPR037138 Histone deacetylase domain superfamily AYJ59_03365 IPR023696 Ureohydrolase domain superfamily AYJ59_03400 IPR004409 Biotin operon repressor, helix-turn-helix domain AYJ59_03400 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03400 IPR030855 Bifunctional ligase/repressor BirA AYJ59_03400 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AYJ59_03400 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_03400 IPR008988 Transcriptional repressor, C-terminal AYJ59_03400 IPR003142 Biotin protein ligase, C-terminal AYJ59_03400 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AYJ59_03400 IPR013196 Helix-turn-helix, type 11 AYJ59_03405 IPR004619 Type III pantothenate kinase AYJ59_03415 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AYJ59_03415 IPR029069 HotDog domain superfamily AYJ59_03415 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AYJ59_03420 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ59_03420 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ59_03420 IPR000794 Beta-ketoacyl synthase AYJ59_03420 IPR018201 Beta-ketoacyl synthase, active site AYJ59_03420 IPR016039 Thiolase-like AYJ59_03420 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ59_03435 IPR003593 AAA+ ATPase domain AYJ59_03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03435 IPR004390 Signal-recognition particle receptor FtsY AYJ59_03435 IPR013822 Signal recognition particle SRP54, helical bundle AYJ59_03435 IPR036225 SRP/SRP receptor, N-terminal AYJ59_03435 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AYJ59_03435 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AYJ59_03440 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_03440 IPR011765 Peptidase M16, N-terminal AYJ59_03440 IPR001431 Peptidase M16, zinc-binding site AYJ59_03440 IPR007863 Peptidase M16, C-terminal AYJ59_03445 IPR007863 Peptidase M16, C-terminal AYJ59_03445 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_03450 IPR022957 Uncharacterised protein family UPF0299 AYJ59_03450 IPR005538 LrgA/CidA family AYJ59_03455 IPR005261 Conserved hypothetical protein CHP00659 AYJ59_03455 IPR007300 CidB/LrgB family AYJ59_03460 IPR035965 PAS domain superfamily AYJ59_03460 IPR000700 PAS-associated, C-terminal AYJ59_03460 IPR013656 PAS fold-4 AYJ59_03460 IPR000014 PAS domain AYJ59_03460 IPR029787 Nucleotide cyclase AYJ59_03460 IPR000160 GGDEF domain AYJ59_03475 IPR004398 RNA methyltransferase, RsmD AYJ59_03475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_03475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_03480 IPR029787 Nucleotide cyclase AYJ59_03480 IPR005330 MHYT domain AYJ59_03480 IPR000160 GGDEF domain AYJ59_03480 IPR035919 EAL domain superfamily AYJ59_03480 IPR001633 EAL domain AYJ59_03485 IPR001980 Phosphopantetheine adenylyltransferase AYJ59_03485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_03485 IPR004821 Cytidyltransferase-like domain AYJ59_03495 IPR004606 Molybdenum-pterin binding AYJ59_03495 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_03495 IPR005116 Transport-associated OB, type 1 AYJ59_03495 IPR000847 Transcription regulator HTH, LysR AYJ59_03495 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_03495 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03495 IPR016462 Molybdate-dependent transcriptional regulator ModE AYJ59_03500 IPR005950 Molybdate ABC transporter, substrate-binding protein AYJ59_03505 IPR011867 Molybdate ABC transporter, permease protein AYJ59_03505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_03505 IPR035906 MetI-like superfamily AYJ59_03510 IPR011868 Molybdate ABC transporter, ATP-binding protein AYJ59_03510 IPR003439 ABC transporter-like AYJ59_03510 IPR017871 ABC transporter, conserved site AYJ59_03510 IPR015852 ABC transporter, molybdenum import, ModC AYJ59_03510 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_03510 IPR005116 Transport-associated OB, type 1 AYJ59_03510 IPR003593 AAA+ ATPase domain AYJ59_03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03510 IPR004606 Molybdenum-pterin binding AYJ59_03515 IPR001757 P-type ATPase AYJ59_03515 IPR023214 HAD superfamily AYJ59_03515 IPR018303 P-type ATPase, phosphorylation site AYJ59_03515 IPR023298 P-type ATPase, transmembrane domain superfamily AYJ59_03515 IPR006068 Cation-transporting P-type ATPase, C-terminal AYJ59_03515 IPR004014 Cation-transporting P-type ATPase, N-terminal AYJ59_03515 IPR023299 P-type ATPase, cytoplasmic domain N AYJ59_03515 IPR036412 HAD-like superfamily AYJ59_03515 IPR005782 P-type ATPase, subfamily IIA, SERCA-type AYJ59_03515 IPR008250 P-type ATPase, A domain superfamily AYJ59_03525 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AYJ59_03525 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AYJ59_03525 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AYJ59_03525 IPR020629 Formamidopyrimidine-DNA glycosylase AYJ59_03525 IPR035937 MutM-like, N-terminal AYJ59_03525 IPR010979 Ribosomal protein S13-like, H2TH AYJ59_03525 IPR010663 Zinc finger, FPG/IleRS-type AYJ59_03535 IPR009050 Globin-like superfamily AYJ59_03535 IPR000160 GGDEF domain AYJ59_03535 IPR012292 Globin/Protoglobin AYJ59_03535 IPR029787 Nucleotide cyclase AYJ59_03535 IPR039435 Diguanylate cyclase DosC, globin sensor domain AYJ59_03540 IPR038584 Ribosomal protein L33 superfamily AYJ59_03540 IPR001705 Ribosomal protein L33 AYJ59_03540 IPR018264 Ribosomal protein L33, conserved site AYJ59_03540 IPR011332 Zinc-binding ribosomal protein AYJ59_03550 IPR001405 Uncharacterised protein family UPF0758 AYJ59_03550 IPR010994 RuvA domain 2-like AYJ59_03550 IPR025657 RadC-like JAB domain AYJ59_03550 IPR037518 MPN domain AYJ59_03550 IPR020891 Uncharacterised protein family UPF0758, conserved site AYJ59_03560 IPR003382 Flavoprotein AYJ59_03560 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AYJ59_03560 IPR036551 Flavin prenyltransferase-like AYJ59_03560 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AYJ59_03560 IPR035929 CoaB-like superfamily AYJ59_03570 IPR011006 CheY-like superfamily AYJ59_03570 IPR001789 Signal transduction response regulator, receiver domain AYJ59_03570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_03570 IPR005467 Histidine kinase domain AYJ59_03570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_03570 IPR015387 LuxQ, periplasmic AYJ59_03570 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_03570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_03570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_03570 IPR035965 PAS domain superfamily AYJ59_03570 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_03575 IPR001789 Signal transduction response regulator, receiver domain AYJ59_03575 IPR037522 HD-GYP domain AYJ59_03575 IPR003607 HD/PDEase domain AYJ59_03575 IPR011006 CheY-like superfamily AYJ59_03585 IPR000060 BCCT transporter family AYJ59_03585 IPR018093 BCCT transporter, conserved site AYJ59_03595 IPR036157 dUTPase-like superfamily AYJ59_03595 IPR029054 dUTPase-like AYJ59_03595 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AYJ59_03595 IPR033704 dUTPase, trimeric AYJ59_03600 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AYJ59_03600 IPR005841 Alpha-D-phosphohexomutase superfamily AYJ59_03600 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AYJ59_03600 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AYJ59_03600 IPR005843 Alpha-D-phosphohexomutase, C-terminal AYJ59_03600 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AYJ59_03600 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AYJ59_03600 IPR016066 Alpha-D-phosphohexomutase, conserved site AYJ59_03610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_03610 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AYJ59_03610 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_03610 IPR004839 Aminotransferase, class I/classII AYJ59_03610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_03615 IPR036183 YajQ-like superfamily AYJ59_03615 IPR035570 UPF0234, N-terminal AYJ59_03615 IPR035571 UPF0234-like, C-terminal AYJ59_03615 IPR007551 Protein of unknown function DUF520 AYJ59_03630 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_03630 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AYJ59_03630 IPR001057 Glutamate/acetylglutamate kinase AYJ59_03630 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_03630 IPR037528 Acetylglutamate kinase ArgB AYJ59_03630 IPR004662 Acetylglutamate kinase family AYJ59_03640 IPR013655 PAS fold-3 AYJ59_03640 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03640 IPR013655 PAS fold-3 AYJ59_03640 IPR003660 HAMP domain AYJ59_03640 IPR035965 PAS domain superfamily AYJ59_03640 IPR001610 PAC motif AYJ59_03640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03640 IPR035965 PAS domain superfamily AYJ59_03640 IPR000014 PAS domain AYJ59_03640 IPR000014 PAS domain AYJ59_03640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_03640 IPR003660 HAMP domain AYJ59_03640 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_03640 IPR001610 PAC motif AYJ59_03660 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily AYJ59_03660 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_03660 IPR029039 Flavoprotein-like superfamily AYJ59_03660 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AYJ59_03660 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain AYJ59_03660 IPR008254 Flavodoxin/nitric oxide synthase AYJ59_03660 IPR001094 Flavodoxin-like AYJ59_03660 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_03660 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria AYJ59_03660 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding AYJ59_03660 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_03660 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_03665 IPR022371 Exopolyphosphatase AYJ59_03665 IPR030673 Pyrophosphatase, GppA/Ppx-type AYJ59_03665 IPR003695 Ppx/GppA phosphatase AYJ59_03670 IPR003414 Polyphosphate kinase AYJ59_03670 IPR041108 Polyphosphate kinase, C-terminal domain 1 AYJ59_03670 IPR024953 Polyphosphate kinase middle domain AYJ59_03670 IPR036830 Polyphosphate kinase middle domain superfamily AYJ59_03670 IPR025200 Polyphosphate kinase C-terminal domain 2 AYJ59_03670 IPR025198 Polyphosphate kinase N-terminal domain AYJ59_03670 IPR036832 Polyphosphate kinase N-terminal domain superfamily AYJ59_03675 IPR002696 Putative membrane protein insertion efficiency factor AYJ59_03680 IPR002195 Dihydroorotase, conserved site AYJ59_03680 IPR006680 Amidohydrolase-related AYJ59_03680 IPR011059 Metal-dependent hydrolase, composite domain superfamily AYJ59_03680 IPR032466 Metal-dependent hydrolase AYJ59_03680 IPR004722 Dihydroorotase AYJ59_03690 IPR001633 EAL domain AYJ59_03690 IPR013976 Metal-dependent hydrolase HDOD AYJ59_03690 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AYJ59_03690 IPR035919 EAL domain superfamily AYJ59_03695 IPR016161 Aldehyde/histidinol dehydrogenase AYJ59_03695 IPR016163 Aldehyde dehydrogenase, C-terminal AYJ59_03695 IPR016162 Aldehyde dehydrogenase, N-terminal AYJ59_03695 IPR015590 Aldehyde dehydrogenase domain AYJ59_03710 IPR009057 Homeobox-like domain superfamily AYJ59_03710 IPR001647 DNA-binding HTH domain, TetR-type AYJ59_03710 IPR041646 IcaR, C-terminal AYJ59_03715 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_03715 IPR001036 Acriflavin resistance protein AYJ59_03720 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_03725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03725 IPR011545 DEAD/DEAH box helicase domain AYJ59_03725 IPR014014 RNA helicase, DEAD-box type, Q motif AYJ59_03725 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ59_03725 IPR028621 ATP-dependent RNA helicase SrmB AYJ59_03725 IPR001650 Helicase, C-terminal AYJ59_03725 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_03730 IPR021826 Domain of unknown function DUF3412 AYJ59_03730 IPR031100 LOG family AYJ59_03730 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily AYJ59_03730 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal AYJ59_03735 IPR002549 Transmembrane protein TqsA-like AYJ59_03745 IPR000160 GGDEF domain AYJ59_03745 IPR035919 EAL domain superfamily AYJ59_03745 IPR001633 EAL domain AYJ59_03745 IPR029787 Nucleotide cyclase AYJ59_03745 IPR005330 MHYT domain AYJ59_03755 IPR005668 2-isopropylmalate synthase AYJ59_03755 IPR000891 Pyruvate carboxyltransferase AYJ59_03755 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AYJ59_03755 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AYJ59_03755 IPR013785 Aldolase-type TIM barrel AYJ59_03755 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AYJ59_03755 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AYJ59_03760 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AYJ59_03760 IPR000485 AsnC-type HTH domain AYJ59_03760 IPR011991 ArsR-like helix-turn-helix domain AYJ59_03760 IPR019888 Transcription regulator AsnC-type AYJ59_03760 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AYJ59_03760 IPR011008 Dimeric alpha-beta barrel AYJ59_03760 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_03760 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03765 IPR000060 BCCT transporter family AYJ59_03765 IPR018093 BCCT transporter, conserved site AYJ59_03770 IPR022838 GTP cyclohydrolase FolE2 AYJ59_03770 IPR003801 GTP cyclohydrolase FolE2/MptA AYJ59_03775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03775 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ59_03775 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ59_03780 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_03780 IPR006231 Malate:quinone-oxidoreductase AYJ59_03785 IPR001845 HTH ArsR-type DNA-binding domain AYJ59_03785 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_03785 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_03785 IPR011991 ArsR-like helix-turn-helix domain AYJ59_03800 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AYJ59_03800 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AYJ59_03800 IPR036291 NAD(P)-binding domain superfamily AYJ59_03800 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AYJ59_03800 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AYJ59_03800 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AYJ59_03810 IPR036291 NAD(P)-binding domain superfamily AYJ59_03810 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_03810 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_03815 IPR019772 Ferrochelatase, active site AYJ59_03815 IPR001015 Ferrochelatase AYJ59_03815 IPR033659 Ferrochelatase, N-terminal AYJ59_03815 IPR033644 Ferrochelatase, C-terminal AYJ59_03825 IPR011129 Cold shock domain AYJ59_03825 IPR012340 Nucleic acid-binding, OB-fold AYJ59_03825 IPR019844 Cold-shock (CSD) domain AYJ59_03825 IPR002059 Cold-shock protein, DNA-binding AYJ59_03825 IPR012156 Cold shock, CspA AYJ59_03830 IPR002912 ACT domain AYJ59_03830 IPR004810 Formyltetrahydrofolate deformylase AYJ59_03830 IPR036477 Formyl transferase, N-terminal domain superfamily AYJ59_03830 IPR002376 Formyl transferase, N-terminal AYJ59_03830 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AYJ59_03835 IPR006076 FAD dependent oxidoreductase AYJ59_03835 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_03835 IPR006278 Sarcosine oxidase subunit beta AYJ59_03845 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AYJ59_03845 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_03845 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AYJ59_03845 IPR006277 Sarcosine oxidase, alpha subunit AYJ59_03845 IPR041117 SoxA, A3 domain AYJ59_03845 IPR023753 FAD/NAD(P)-binding domain AYJ59_03845 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AYJ59_03845 IPR006222 Aminomethyltransferase, folate-binding domain AYJ59_03845 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AYJ59_03845 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AYJ59_03855 IPR036651 Glutamine synthetase, N-terminal domain superfamily AYJ59_03855 IPR017536 Glutamine synthetase, type III AYJ59_03855 IPR027303 Glutamine synthetase, glycine-rich site AYJ59_03855 IPR008146 Glutamine synthetase, catalytic domain AYJ59_03855 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_03860 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_03860 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_03865 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein AYJ59_03865 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AYJ59_03865 IPR002489 Glutamate synthase, alpha subunit, C-terminal AYJ59_03870 IPR002932 Glutamate synthase domain AYJ59_03870 IPR024188 Glutamate synthase large subunit-like protein AYJ59_03870 IPR013785 Aldolase-type TIM barrel AYJ59_03875 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AYJ59_03875 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AYJ59_03875 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYJ59_03875 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYJ59_03875 IPR036291 NAD(P)-binding domain superfamily AYJ59_03880 IPR029062 Class I glutamine amidotransferase-like AYJ59_03880 IPR017926 Glutamine amidotransferase AYJ59_03880 IPR001674 GMP synthase, C-terminal AYJ59_03880 IPR004739 GMP synthase, glutamine amidotransferase AYJ59_03880 IPR022955 GMP synthase AYJ59_03880 IPR025777 GMP synthetase ATP pyrophosphatase domain AYJ59_03880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_03885 IPR016181 Acyl-CoA N-acyltransferase AYJ59_03885 IPR000182 GNAT domain AYJ59_03885 IPR017813 Mycothiol acetyltransferase AYJ59_03890 IPR001905 Ammonium transporter AYJ59_03890 IPR029020 Ammonium/urea transporter AYJ59_03890 IPR024041 Ammonium transporter AmtB-like domain AYJ59_03890 IPR018047 Ammonium transporter, conserved site AYJ59_03895 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ59_03895 IPR017918 Nitrogen regulatory protein PII, conserved site AYJ59_03895 IPR002187 Nitrogen regulatory protein PII AYJ59_03895 IPR002332 Nitrogen regulatory protein P-II, urydylation site AYJ59_03895 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ59_03910 IPR040442 Pyruvate kinase-like domain superfamily AYJ59_03910 IPR018209 Pyruvate kinase, active site AYJ59_03910 IPR011037 Pyruvate kinase-like, insert domain superfamily AYJ59_03910 IPR001697 Pyruvate kinase AYJ59_03910 IPR015795 Pyruvate kinase, C-terminal AYJ59_03910 IPR015793 Pyruvate kinase, barrel AYJ59_03910 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_03910 IPR015806 Pyruvate kinase, insert domain superfamily AYJ59_03910 IPR036918 Pyruvate kinase, C-terminal domain superfamily AYJ59_03915 IPR000160 GGDEF domain AYJ59_03915 IPR033424 Membrane-associated sensor domain AYJ59_03915 IPR029787 Nucleotide cyclase AYJ59_03920 IPR000089 Biotin/lipoyl attachment AYJ59_03920 IPR017453 Glycine cleavage system H-protein, subgroup AYJ59_03920 IPR011053 Single hybrid motif AYJ59_03920 IPR033753 Glycine cleavage system H-protein/Simiate AYJ59_03920 IPR002930 Glycine cleavage system H-protein AYJ59_03920 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AYJ59_03925 IPR041532 RlmI, PUA-like domain AYJ59_03925 IPR019614 S-adenosylmethionine-dependent methyltransferase AYJ59_03925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_03925 IPR036974 PUA domain superfamily AYJ59_03925 IPR023542 rRNA large subunit methyltransferase I AYJ59_03925 IPR015947 PUA-like superfamily AYJ59_03925 IPR002478 PUA domain AYJ59_03935 IPR000183 Ornithine/DAP/Arg decarboxylase AYJ59_03935 IPR002986 Diaminopimelate decarboxylase, LysA AYJ59_03935 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AYJ59_03935 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AYJ59_03935 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AYJ59_03935 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AYJ59_03935 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AYJ59_03935 IPR029066 PLP-binding barrel AYJ59_03945 IPR029058 Alpha/Beta hydrolase fold AYJ59_03945 IPR003140 Phospholipase/carboxylesterase/thioesterase AYJ59_03970 IPR006073 GTP binding domain AYJ59_03970 IPR011640 Ferrous iron transport protein B, C-terminal AYJ59_03970 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AYJ59_03970 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_03970 IPR003373 Ferrous iron transport protein B AYJ59_03970 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AYJ59_03980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_03980 IPR010743 Methionine biosynthesis MetW AYJ59_03980 IPR008220 Homoserine/serine acetyltransferase MetX-like AYJ59_03980 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_03980 IPR029058 Alpha/Beta hydrolase fold AYJ59_03985 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_03985 IPR029058 Alpha/Beta hydrolase fold AYJ59_03985 IPR008220 Homoserine/serine acetyltransferase MetX-like AYJ59_03990 IPR003425 CCB3/YggT AYJ59_03995 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AYJ59_03995 IPR036291 NAD(P)-binding domain superfamily AYJ59_03995 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AYJ59_03995 IPR000304 Pyrroline-5-carboxylate reductase AYJ59_03995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_04000 IPR014362 Glutamate dehydrogenase AYJ59_04000 IPR036291 NAD(P)-binding domain superfamily AYJ59_04000 IPR033922 NAD(P) binding domain of glutamate dehydrogenase AYJ59_04000 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AYJ59_04000 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AYJ59_04000 IPR033524 Leu/Phe/Val dehydrogenases active site AYJ59_04000 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AYJ59_04005 IPR001610 PAC motif AYJ59_04005 IPR003660 HAMP domain AYJ59_04005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_04005 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_04005 IPR001610 PAC motif AYJ59_04005 IPR003660 HAMP domain AYJ59_04005 IPR013655 PAS fold-3 AYJ59_04005 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_04005 IPR013655 PAS fold-3 AYJ59_04005 IPR035965 PAS domain superfamily AYJ59_04005 IPR000014 PAS domain AYJ59_04005 IPR035965 PAS domain superfamily AYJ59_04005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_04005 IPR000014 PAS domain AYJ59_04015 IPR011078 Pyridoxal phosphate homeostasis protein AYJ59_04015 IPR001608 Alanine racemase, N-terminal AYJ59_04015 IPR029066 PLP-binding barrel AYJ59_04020 IPR022488 Polyphosphate kinase-2-related AYJ59_04020 IPR022486 Polyphosphate kinase 2, PA0141 AYJ59_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_04035 IPR011059 Metal-dependent hydrolase, composite domain superfamily AYJ59_04035 IPR032466 Metal-dependent hydrolase AYJ59_04035 IPR006680 Amidohydrolase-related AYJ59_04035 IPR004722 Dihydroorotase AYJ59_04040 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AYJ59_04040 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AYJ59_04040 IPR006130 Aspartate/ornithine carbamoyltransferase AYJ59_04040 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AYJ59_04040 IPR002082 Aspartate carbamoyltransferase AYJ59_04045 IPR005227 Putative pre-16S rRNA nuclease AYJ59_04045 IPR012337 Ribonuclease H-like superfamily AYJ59_04045 IPR037027 YqgF/RNase H-like domain superfamily AYJ59_04045 IPR006641 YqgF/RNase H-like domain AYJ59_04050 IPR003774 Protein of unknown function UPF0301 AYJ59_04055 IPR024932 Flavin transferase ApbE AYJ59_04055 IPR042159 Flavin-trafficking protein ApbE AYJ59_04055 IPR003374 ApbE-like superfamily AYJ59_04060 IPR001610 PAC motif AYJ59_04060 IPR000014 PAS domain AYJ59_04060 IPR035965 PAS domain superfamily AYJ59_04060 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_04060 IPR013655 PAS fold-3 AYJ59_04060 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_04060 IPR001610 PAC motif AYJ59_04060 IPR035965 PAS domain superfamily AYJ59_04060 IPR000014 PAS domain AYJ59_04060 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_04060 IPR003660 HAMP domain AYJ59_04060 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_04060 IPR003660 HAMP domain AYJ59_04060 IPR013655 PAS fold-3 AYJ59_04065 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AYJ59_04065 IPR006284 Glutathione synthetase, prokaryotic AYJ59_04065 IPR004215 Prokaryotic glutathione synthetase, N-terminal AYJ59_04065 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_04065 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_04065 IPR011761 ATP-grasp fold AYJ59_04075 IPR029028 Alpha/beta knot methyltransferases AYJ59_04075 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_04075 IPR006700 Ribosomal RNA small subunit methyltransferase E AYJ59_04075 IPR015947 PUA-like superfamily AYJ59_04080 IPR004620 5,10-methylenetetrahydrofolate reductase AYJ59_04080 IPR003171 Methylenetetrahydrofolate reductase AYJ59_04080 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase AYJ59_04080 IPR029041 FAD-linked oxidoreductase-like AYJ59_04085 IPR022629 S-adenosylmethionine synthetase, central domain AYJ59_04085 IPR022628 S-adenosylmethionine synthetase, N-terminal AYJ59_04085 IPR002133 S-adenosylmethionine synthetase AYJ59_04085 IPR022636 S-adenosylmethionine synthetase superfamily AYJ59_04085 IPR022631 S-adenosylmethionine synthetase, conserved site AYJ59_04085 IPR022630 S-adenosylmethionine synthetase, C-terminal AYJ59_04090 IPR013515 Phytochrome, central region AYJ59_04090 IPR001294 Phytochrome AYJ59_04090 IPR035919 EAL domain superfamily AYJ59_04090 IPR016132 Phytochrome chromophore attachment domain AYJ59_04090 IPR029787 Nucleotide cyclase AYJ59_04090 IPR000160 GGDEF domain AYJ59_04090 IPR029016 GAF-like domain superfamily AYJ59_04090 IPR003018 GAF domain AYJ59_04090 IPR001633 EAL domain AYJ59_04095 IPR035893 PurE domain superfamily AYJ59_04095 IPR000031 PurE domain AYJ59_04095 IPR033747 Class I PurE AYJ59_04095 IPR024694 PurE, prokaryotic type AYJ59_04100 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_04100 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AYJ59_04100 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit AYJ59_04100 IPR011761 ATP-grasp fold AYJ59_04100 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain AYJ59_04100 IPR011054 Rudiment single hybrid motif AYJ59_04100 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_04105 IPR004443 YjeF N-terminal domain AYJ59_04105 IPR017953 Carbohydrate kinase, predicted, conserved site AYJ59_04105 IPR036652 YjeF N-terminal domain superfamily AYJ59_04105 IPR029056 Ribokinase-like AYJ59_04105 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AYJ59_04105 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AYJ59_04110 IPR003824 Undecaprenyl-diphosphatase UppP AYJ59_04120 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AYJ59_04120 IPR000090 Flagellar motor switch protein FliG AYJ59_04120 IPR011002 Flagellar motor switch protein FliG, alpha-helical AYJ59_04120 IPR032779 Flagellar motor switch protein FliG, middle domain AYJ59_04120 IPR023087 Flagellar motor switch protein FliG, C-terminal AYJ59_04130 IPR006157 Dihydroneopterin aldolase/epimerase domain AYJ59_04130 IPR006156 Dihydroneopterin aldolase AYJ59_04135 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AYJ59_04140 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AYJ59_04140 IPR017860 Peptidase M22, conserved site AYJ59_04140 IPR017861 Kae1/TsaD family AYJ59_04140 IPR000905 Gcp-like domain AYJ59_04145 IPR042184 YqeY/Aim41, N-terminal domain AYJ59_04145 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AYJ59_04145 IPR019004 Uncharacterised protein YqeY/Aim41 AYJ59_04145 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AYJ59_04150 IPR013264 DNA primase, catalytic core, N-terminal AYJ59_04150 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AYJ59_04150 IPR006295 DNA primase, DnaG AYJ59_04150 IPR013173 DNA primase DnaG, DnaB-binding domain AYJ59_04150 IPR036977 DNA Primase, CHC2-type zinc finger AYJ59_04150 IPR030846 DNA primase DnaG, bacteria AYJ59_04150 IPR034151 Bacterial DnaG primase, TOPRIM domain AYJ59_04150 IPR006171 TOPRIM domain AYJ59_04150 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AYJ59_04150 IPR019475 DNA primase, DnaB-helicase binding domain AYJ59_04150 IPR002694 Zinc finger, CHC2-type AYJ59_04155 IPR007624 RNA polymerase sigma-70 region 3 AYJ59_04155 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_04155 IPR014284 RNA polymerase sigma-70 like domain AYJ59_04155 IPR007630 RNA polymerase sigma-70 region 4 AYJ59_04155 IPR007631 RNA polymerase sigma factor 70, non-essential domain AYJ59_04155 IPR007127 RNA polymerase sigma factor 70, region 1.1 AYJ59_04155 IPR042189 Sigma-70 factor, region 1.1 superfamily AYJ59_04155 IPR009042 RNA polymerase sigma-70 region 1.2 AYJ59_04155 IPR000943 RNA polymerase sigma-70 AYJ59_04155 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04155 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_04155 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_04155 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AYJ59_04155 IPR028630 RNA polymerase sigma factor RpoD AYJ59_04170 IPR029787 Nucleotide cyclase AYJ59_04170 IPR033424 Membrane-associated sensor domain AYJ59_04170 IPR000160 GGDEF domain AYJ59_04195 IPR027939 NMT1/THI5 family AYJ59_04195 IPR015168 SsuA/THI5-like AYJ59_04200 IPR024087 Creatininase-like superfamily AYJ59_04200 IPR003785 Creatininase/formamide hydrolase AYJ59_04200 IPR023871 Mycofactocin system creatininase family protein AYJ59_04205 IPR008146 Glutamine synthetase, catalytic domain AYJ59_04205 IPR027303 Glutamine synthetase, glycine-rich site AYJ59_04205 IPR017536 Glutamine synthetase, type III AYJ59_04205 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_04205 IPR036651 Glutamine synthetase, N-terminal domain superfamily AYJ59_04210 IPR014036 DeoR C-terminal sensor domain AYJ59_04210 IPR001034 DeoR-type HTH domain AYJ59_04210 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_04210 IPR037171 NagB/RpiA transferase-like AYJ59_04210 IPR018356 Transcription regulator, HTH DeoR-type, conserved site AYJ59_04210 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04220 IPR003439 ABC transporter-like AYJ59_04220 IPR003593 AAA+ ATPase domain AYJ59_04220 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_04220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_04220 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AYJ59_04220 IPR013611 Transport-associated OB, type 2 AYJ59_04220 IPR017871 ABC transporter, conserved site AYJ59_04220 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AYJ59_04225 IPR035906 MetI-like superfamily AYJ59_04225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_04230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_04230 IPR035906 MetI-like superfamily AYJ59_04240 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_04240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_04240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_04240 IPR005814 Aminotransferase class-III AYJ59_04240 IPR017747 Putrescine aminotransferase AYJ59_04245 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_04245 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_04245 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AYJ59_04245 IPR036291 NAD(P)-binding domain superfamily AYJ59_04250 IPR004304 Acetamidase/Formamidase AYJ59_04255 IPR013785 Aldolase-type TIM barrel AYJ59_04255 IPR010628 Ethanolamine ammonia lyase large subunit AYJ59_04260 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal AYJ59_04260 IPR009246 Ethanolamine ammonia-lyase light chain AYJ59_04260 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal AYJ59_04265 IPR017853 Glycoside hydrolase superfamily AYJ59_04265 IPR013780 Glycosyl hydrolase, all-beta AYJ59_04265 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AYJ59_04270 IPR002139 Ribokinase/fructokinase AYJ59_04270 IPR011611 Carbohydrate kinase PfkB AYJ59_04270 IPR029056 Ribokinase-like AYJ59_04270 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AYJ59_04275 IPR038068 YcgL-like superfamily AYJ59_04275 IPR006380 Sucrose-phosphatase-like, N-terminal AYJ59_04275 IPR036412 HAD-like superfamily AYJ59_04275 IPR023214 HAD superfamily AYJ59_04275 IPR006379 HAD-superfamily hydrolase, subfamily IIB AYJ59_04275 IPR027354 YcgL domain AYJ59_04280 IPR012820 Sucrose synthase, plant/cyanobacteria AYJ59_04280 IPR000368 Sucrose synthase AYJ59_04280 IPR001296 Glycosyl transferase, family 1 AYJ59_04295 IPR014085 Allophanate hydrolase AYJ59_04295 IPR023631 Amidase signature domain AYJ59_04295 IPR036928 Amidase signature (AS) superfamily AYJ59_04300 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AYJ59_04300 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_04300 IPR011054 Rudiment single hybrid motif AYJ59_04300 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_04300 IPR011761 ATP-grasp fold AYJ59_04300 IPR005481 Biotin carboxylase-like, N-terminal domain AYJ59_04300 IPR011764 Biotin carboxylation domain AYJ59_04300 IPR005482 Biotin carboxylase, C-terminal AYJ59_04305 IPR018959 Protein of unknown function DUF1989 AYJ59_04320 IPR003439 ABC transporter-like AYJ59_04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_04320 IPR003593 AAA+ ATPase domain AYJ59_04325 IPR035906 MetI-like superfamily AYJ59_04325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_04335 IPR023696 Ureohydrolase domain superfamily AYJ59_04335 IPR023801 Histone deacetylase domain AYJ59_04335 IPR000286 Histone deacetylase family AYJ59_04335 IPR037138 Histone deacetylase domain superfamily AYJ59_04380 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_04380 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04380 IPR001845 HTH ArsR-type DNA-binding domain AYJ59_04380 IPR011991 ArsR-like helix-turn-helix domain AYJ59_04385 IPR001478 PDZ domain AYJ59_04385 IPR036034 PDZ superfamily AYJ59_04385 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_04385 IPR005151 Tail specific protease AYJ59_04385 IPR004447 C-terminal-processing peptidase S41A AYJ59_04390 IPR002818 DJ-1/PfpI AYJ59_04390 IPR029062 Class I glutamine amidotransferase-like AYJ59_04390 IPR006286 Deglycase PfpI AYJ59_04400 IPR006143 RND efflux pump, membrane fusion protein AYJ59_04400 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_04405 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_04405 IPR001036 Acriflavin resistance protein AYJ59_04405 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA AYJ59_04420 IPR036237 Xylose isomerase-like superfamily AYJ59_04420 IPR007801 Uncharacterised protein family UPF0276 AYJ59_04430 IPR001633 EAL domain AYJ59_04430 IPR005330 MHYT domain AYJ59_04430 IPR029787 Nucleotide cyclase AYJ59_04430 IPR035965 PAS domain superfamily AYJ59_04430 IPR035919 EAL domain superfamily AYJ59_04430 IPR000160 GGDEF domain AYJ59_04435 IPR023679 Uncharacterised protein family UPF0761, bacterial AYJ59_04435 IPR017039 Virulence factor BrkB AYJ59_04440 IPR039425 RNA polymerase sigma-70 like AYJ59_04440 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AYJ59_04440 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_04440 IPR014284 RNA polymerase sigma-70 like domain AYJ59_04440 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AYJ59_04440 IPR014293 RNA polymerase sigma-70, actinobacteria AYJ59_04440 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_04440 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_04440 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04480 IPR000358 Ribonucleotide reductase small subunit family AYJ59_04480 IPR030475 Ribonucleotide reductase small subunit, acitve site AYJ59_04480 IPR033909 Ribonucleotide reductase small subunit AYJ59_04480 IPR012348 Ribonucleotide reductase-like AYJ59_04480 IPR009078 Ferritin-like superfamily AYJ59_04500 IPR001045 Spermidine/spermine synthases AYJ59_04500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_04500 IPR030374 Polyamine biosynthesis domain AYJ59_04505 IPR013766 Thioredoxin domain AYJ59_04505 IPR017937 Thioredoxin, conserved site AYJ59_04505 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AYJ59_04505 IPR013740 Redoxin AYJ59_04505 IPR036249 Thioredoxin-like superfamily AYJ59_04510 IPR008854 TPMT family AYJ59_04510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_04510 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification AYJ59_04510 IPR025835 Thiopurine S-methyltransferase AYJ59_04515 IPR023214 HAD superfamily AYJ59_04515 IPR041492 Haloacid dehalogenase-like hydrolase AYJ59_04515 IPR006439 HAD hydrolase, subfamily IA AYJ59_04515 IPR036412 HAD-like superfamily AYJ59_04520 IPR000086 NUDIX hydrolase domain AYJ59_04520 IPR015797 NUDIX hydrolase-like domain superfamily AYJ59_04520 IPR020084 NUDIX hydrolase, conserved site AYJ59_04530 IPR036876 UVR domain superfamily AYJ59_04530 IPR004807 UvrABC system, subunit B AYJ59_04530 IPR001943 UVR domain AYJ59_04530 IPR024759 UvrB, YAD/RRR-motif-containing domain AYJ59_04530 IPR001650 Helicase, C-terminal AYJ59_04530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_04530 IPR041471 UvrB, interaction domain AYJ59_04530 IPR006935 Helicase/UvrB, N-terminal AYJ59_04530 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_04545 IPR000834 Peptidase M14, carboxypeptidase A AYJ59_04555 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AYJ59_04555 IPR023042 Peptidase M17, leucine aminopeptidase AYJ59_04555 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AYJ59_04555 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AYJ59_04565 IPR005495 Permease LptG/LptF-related AYJ59_04565 IPR030923 LPS export ABC transporter permease LptG AYJ59_04585 IPR013785 Aldolase-type TIM barrel AYJ59_04585 IPR007197 Radical SAM AYJ59_04585 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AYJ59_04585 IPR022462 Lysine-2,3-aminomutase-like AYJ59_04600 IPR034341 Stringent starvation protein A, N-terminal AYJ59_04600 IPR036249 Thioredoxin-like superfamily AYJ59_04600 IPR004046 Glutathione S-transferase, C-terminal AYJ59_04600 IPR010987 Glutathione S-transferase, C-terminal-like AYJ59_04600 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AYJ59_04600 IPR040079 Glutathione Transferase family AYJ59_04600 IPR004045 Glutathione S-transferase, N-terminal AYJ59_04605 IPR036760 SspB-like superfamily AYJ59_04605 IPR007481 Stringent starvation protein B AYJ59_04640 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal AYJ59_04640 IPR016039 Thiolase-like AYJ59_04640 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic AYJ59_04640 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain AYJ59_04645 IPR000262 FMN-dependent dehydrogenase AYJ59_04645 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent AYJ59_04645 IPR013785 Aldolase-type TIM barrel AYJ59_04655 IPR023059 Foldase protein PrsA AYJ59_04655 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AYJ59_04655 IPR027304 Trigger factor/SurA domain superfamily AYJ59_04665 IPR000101 Gamma-glutamyltranspeptidase AYJ59_04665 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_04670 IPR035901 GIY-YIG endonuclease superfamily AYJ59_04670 IPR000305 GIY-YIG endonuclease AYJ59_04680 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04680 IPR030489 Transcription regulator Rrf2-type, conserved site AYJ59_04680 IPR000944 Transcription regulator Rrf2-type AYJ59_04680 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_04685 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_04685 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AYJ59_04685 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_04685 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AYJ59_04685 IPR023950 Flavohemoprotein AYJ59_04685 IPR009050 Globin-like superfamily AYJ59_04685 IPR000971 Globin AYJ59_04685 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_04685 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_04685 IPR012292 Globin/Protoglobin AYJ59_04700 IPR000944 Transcription regulator Rrf2-type AYJ59_04700 IPR030489 Transcription regulator Rrf2-type, conserved site AYJ59_04700 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_04700 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04720 IPR029061 Thiamin diphosphate-binding fold AYJ59_04720 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AYJ59_04725 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit AYJ59_04725 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AYJ59_04725 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain AYJ59_04725 IPR029061 Thiamin diphosphate-binding fold AYJ59_04725 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AYJ59_04725 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain AYJ59_04725 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AYJ59_04730 IPR006225 Pseudouridine synthase, RluC/RluD AYJ59_04730 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_04730 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_04730 IPR036986 RNA-binding S4 domain superfamily AYJ59_04730 IPR002942 RNA-binding S4 domain AYJ59_04730 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_04740 IPR010432 RDD AYJ59_04745 IPR036259 MFS transporter superfamily AYJ59_04745 IPR020846 Major facilitator superfamily domain AYJ59_04745 IPR004734 Multidrug resistance protein AYJ59_04745 IPR011701 Major facilitator superfamily AYJ59_04745 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AYJ59_04755 IPR009056 Cytochrome c-like domain AYJ59_04755 IPR024167 Cytochrome c4-like AYJ59_04755 IPR036909 Cytochrome c-like domain superfamily AYJ59_04760 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_04760 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_04760 IPR023753 FAD/NAD(P)-binding domain AYJ59_04760 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AYJ59_04760 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily AYJ59_04760 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding AYJ59_04760 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AYJ59_04765 IPR036909 Cytochrome c-like domain superfamily AYJ59_04765 IPR009056 Cytochrome c-like domain AYJ59_04795 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I AYJ59_04795 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal AYJ59_04795 IPR033966 RuBisCO AYJ59_04795 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily AYJ59_04795 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal AYJ59_04795 IPR036422 RuBisCO large subunit, N-terminal domain superfamily AYJ59_04800 IPR000894 Ribulose bisphosphate carboxylase small chain, domain AYJ59_04800 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily AYJ59_04860 IPR020922 dITP/XTP pyrophosphatase AYJ59_04860 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ59_04860 IPR002637 Ham1-like protein AYJ59_04870 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_04870 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_04870 IPR000847 Transcription regulator HTH, LysR AYJ59_04870 IPR005119 LysR, substrate-binding AYJ59_04875 IPR003370 Chromate transporter AYJ59_04875 IPR014047 Chromate transporter, long chain AYJ59_04885 IPR034739 UvrD/AddA helicase, N-terminal AYJ59_04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_04885 IPR014016 UvrD-like helicase, ATP-binding domain AYJ59_04885 IPR011604 Exonuclease, phage-type/RecB, C-terminal AYJ59_04885 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AYJ59_04885 IPR000212 DNA helicase, UvrD/REP type AYJ59_04885 IPR014017 UvrD-like DNA helicase, C-terminal AYJ59_04885 IPR014152 DNA helicase subunit AddA AYJ59_04885 IPR011335 Restriction endonuclease type II-like AYJ59_04900 IPR003509 Uncharacterised protein family UPF0102 AYJ59_04900 IPR011856 tRNA endonuclease-like domain superfamily AYJ59_04900 IPR011335 Restriction endonuclease type II-like AYJ59_04910 IPR035996 Tetrapyrrole methylase superfamily AYJ59_04910 IPR014777 Tetrapyrrole methylase, subdomain 1 AYJ59_04910 IPR014776 Tetrapyrrole methylase, subdomain 2 AYJ59_04910 IPR000878 Tetrapyrrole methylase AYJ59_04910 IPR008189 rRNA small subunit methyltransferase I AYJ59_04910 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AYJ59_04915 IPR001347 Sugar isomerase (SIS) AYJ59_04915 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_04915 IPR035466 GlmS/AgaS, SIS domain 1 AYJ59_04915 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AYJ59_04915 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_04915 IPR035490 GlmS/FrlB, SIS domain 2 AYJ59_04920 IPR005835 Nucleotidyl transferase domain AYJ59_04920 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_04920 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AYJ59_04925 IPR011051 RmlC-like cupin domain superfamily AYJ59_04925 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AYJ59_04925 IPR014710 RmlC-like jelly roll fold AYJ59_04930 IPR005913 dTDP-4-dehydrorhamnose reductase family AYJ59_04930 IPR029903 RmlD-like substrate binding domain AYJ59_04930 IPR036291 NAD(P)-binding domain superfamily AYJ59_04935 IPR036291 NAD(P)-binding domain superfamily AYJ59_04935 IPR016040 NAD(P)-binding domain AYJ59_04935 IPR005888 dTDP-glucose 4,6-dehydratase AYJ59_04940 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AYJ59_04940 IPR017927 FAD-binding domain, ferredoxin reductase-type AYJ59_04940 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AYJ59_04940 IPR012675 Beta-grasp domain superfamily AYJ59_04940 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AYJ59_04940 IPR001433 Oxidoreductase FAD/NAD(P)-binding AYJ59_04940 IPR036010 2Fe-2S ferredoxin-like superfamily AYJ59_04940 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AYJ59_04940 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_04940 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AYJ59_04945 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_04945 IPR013446 Glucose-1-phosphate cytidylyltransferase AYJ59_04945 IPR005835 Nucleotidyl transferase domain AYJ59_04950 IPR016040 NAD(P)-binding domain AYJ59_04950 IPR013445 CDP-glucose 4,6-dehydratase AYJ59_04950 IPR036291 NAD(P)-binding domain superfamily AYJ59_04955 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AYJ59_04955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_04955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_04955 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_04960 IPR005474 Transketolase, N-terminal AYJ59_04960 IPR029061 Thiamin diphosphate-binding fold AYJ59_04965 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AYJ59_04965 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ59_04965 IPR033248 Transketolase, C-terminal domain AYJ59_04965 IPR029061 Thiamin diphosphate-binding fold AYJ59_04970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_04970 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_04970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_04970 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AYJ59_04995 IPR001296 Glycosyl transferase, family 1 AYJ59_04995 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AYJ59_05000 IPR001296 Glycosyl transferase, family 1 AYJ59_05000 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AYJ59_05005 IPR036291 NAD(P)-binding domain superfamily AYJ59_05005 IPR016040 NAD(P)-binding domain AYJ59_05005 IPR006368 GDP-mannose 4,6-dehydratase AYJ59_05010 IPR036291 NAD(P)-binding domain superfamily AYJ59_05010 IPR016040 NAD(P)-binding domain AYJ59_05015 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AYJ59_05015 IPR005835 Nucleotidyl transferase domain AYJ59_05015 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_05015 IPR014710 RmlC-like jelly roll fold AYJ59_05015 IPR011051 RmlC-like cupin domain superfamily AYJ59_05015 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AYJ59_05020 IPR005843 Alpha-D-phosphohexomutase, C-terminal AYJ59_05020 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AYJ59_05020 IPR016066 Alpha-D-phosphohexomutase, conserved site AYJ59_05020 IPR005841 Alpha-D-phosphohexomutase superfamily AYJ59_05020 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AYJ59_05020 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AYJ59_05020 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AYJ59_05020 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AYJ59_05025 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AYJ59_05025 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AYJ59_05025 IPR003362 Bacterial sugar transferase AYJ59_05040 IPR012340 Nucleic acid-binding, OB-fold AYJ59_05040 IPR029319 DNA ligase, OB-like domain AYJ59_05040 IPR016059 DNA ligase, ATP-dependent, conserved site AYJ59_05040 IPR012310 DNA ligase, ATP-dependent, central AYJ59_05045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_05045 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AYJ59_05055 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_05055 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AYJ59_05055 IPR004154 Anticodon-binding AYJ59_05055 IPR036621 Anticodon-binding domain superfamily AYJ59_05055 IPR012675 Beta-grasp domain superfamily AYJ59_05055 IPR004095 TGS AYJ59_05055 IPR012676 TGS-like AYJ59_05055 IPR002320 Threonine-tRNA ligase, class IIa AYJ59_05055 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AYJ59_05055 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AYJ59_05055 IPR033728 Threonine-tRNA ligase catalytic core domain AYJ59_05060 IPR019814 Translation initiation factor 3, N-terminal AYJ59_05060 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AYJ59_05060 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AYJ59_05060 IPR019813 Translation initiation factor 3, conserved site AYJ59_05060 IPR001288 Translation initiation factor 3 AYJ59_05060 IPR019815 Translation initiation factor 3, C-terminal AYJ59_05065 IPR021137 Ribosomal protein L35 AYJ59_05065 IPR018265 Ribosomal protein L35, conserved site AYJ59_05065 IPR001706 Ribosomal protein L35, non-mitochondrial AYJ59_05065 IPR037229 Ribosomal protein L35 superfamily AYJ59_05070 IPR035566 Ribosomal protein L20, C-terminal AYJ59_05070 IPR005813 Ribosomal protein L20 AYJ59_05075 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_05075 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AYJ59_05075 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AYJ59_05075 IPR002319 Phenylalanyl-tRNA synthetase AYJ59_05075 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AYJ59_05075 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AYJ59_05080 IPR005146 B3/B4 tRNA-binding domain AYJ59_05080 IPR009061 Putative DNA-binding domain superfamily AYJ59_05080 IPR005121 Ferrodoxin-fold anticodon-binding domain AYJ59_05080 IPR002547 tRNA-binding domain AYJ59_05080 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AYJ59_05080 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AYJ59_05080 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AYJ59_05080 IPR012340 Nucleic acid-binding, OB-fold AYJ59_05080 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AYJ59_05080 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AYJ59_05080 IPR005147 tRNA synthetase, B5-domain AYJ59_05085 IPR005684 Integration host factor, alpha subunit AYJ59_05085 IPR000119 Histone-like DNA-binding protein AYJ59_05085 IPR020816 Histone-like DNA-binding protein, conserved site AYJ59_05085 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AYJ59_05105 IPR029052 Metallo-dependent phosphatase-like AYJ59_05105 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AYJ59_05105 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AYJ59_05110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_05110 IPR011530 Ribosomal RNA adenine dimethylase AYJ59_05110 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AYJ59_05110 IPR023165 rRNA adenine dimethylase-like AYJ59_05110 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AYJ59_05115 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase AYJ59_05115 IPR005255 PdxA family AYJ59_05120 IPR027304 Trigger factor/SurA domain superfamily AYJ59_05120 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AYJ59_05120 IPR015391 SurA N-terminal AYJ59_05120 IPR023034 Peptidyl-prolyl isomerase SurA AYJ59_05125 IPR020889 LPS-assembly protein LptD AYJ59_05125 IPR007543 LptD, C-terminal AYJ59_05125 IPR005653 Organic solvent tolerance-like, N-terminal AYJ59_05130 IPR002575 Aminoglycoside phosphotransferase AYJ59_05130 IPR011009 Protein kinase-like domain superfamily AYJ59_05135 IPR005835 Nucleotidyl transferase domain AYJ59_05135 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_05145 IPR005583 Peroxide stress protein YaaA AYJ59_05150 IPR016154 Heat shock protein Hsp33, C-terminal AYJ59_05150 IPR000397 Heat shock protein Hsp33 AYJ59_05150 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AYJ59_05150 IPR016153 Heat shock protein Hsp33, N-terminal AYJ59_05155 IPR006638 Elp3/MiaB/NifB AYJ59_05155 IPR013785 Aldolase-type TIM barrel AYJ59_05155 IPR007197 Radical SAM AYJ59_05155 IPR003698 Lipoyl synthase AYJ59_05155 IPR031691 Lipoyl synthase, N-terminal AYJ59_05160 IPR000544 Octanoyltransferase AYJ59_05160 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AYJ59_05160 IPR020605 Octanoyltransferase, conserved site AYJ59_05165 IPR027471 YbeD-like domain superfamily AYJ59_05165 IPR007454 Uncharacterised protein family UPF0250 AYJ59_05170 IPR018300 Aminotransferase, class IV, conserved site AYJ59_05170 IPR005784 D-amino acid aminotransferase AYJ59_05170 IPR036038 Aminotransferase-like, PLP-dependent enzymes AYJ59_05170 IPR001544 Aminotransferase class IV AYJ59_05175 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_05175 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AYJ59_05175 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AYJ59_05175 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AYJ59_05175 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AYJ59_05175 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AYJ59_05180 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AYJ59_05180 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AYJ59_05180 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB AYJ59_05185 IPR005311 Penicillin-binding protein, dimerisation domain AYJ59_05185 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_05185 IPR017790 Penicillin-binding protein 2 AYJ59_05185 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AYJ59_05185 IPR001460 Penicillin-binding protein, transpeptidase AYJ59_05195 IPR007221 Rod shape-determining protein MreC AYJ59_05195 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 AYJ59_05195 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 AYJ59_05200 IPR004753 Cell shape determining protein MreB AYJ59_05205 IPR003837 Glu-tRNAGln amidotransferase C subunit AYJ59_05205 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AYJ59_05210 IPR000120 Amidase AYJ59_05210 IPR036928 Amidase signature (AS) superfamily AYJ59_05210 IPR020556 Amidase, conserved site AYJ59_05210 IPR023631 Amidase signature domain AYJ59_05210 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AYJ59_05215 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AYJ59_05215 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AYJ59_05215 IPR018027 Asn/Gln amidotransferase AYJ59_05215 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AYJ59_05215 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AYJ59_05215 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AYJ59_05215 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AYJ59_05215 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AYJ59_05215 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_05220 IPR022919 Peptidase M48, protease HtpX, putative AYJ59_05220 IPR001915 Peptidase M48 AYJ59_05230 IPR003808 Fe-S metabolism associated domain, SufE-like AYJ59_05240 IPR003400 Biopolymer transport protein ExbD/TolR AYJ59_05240 IPR014171 TonB system transport protein ExbD type-2 AYJ59_05245 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_05245 IPR014172 TonB-system energizer ExbB type-2 AYJ59_05250 IPR001279 Metallo-beta-lactamase AYJ59_05250 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ59_05250 IPR001018 Beta-lactamase, class-B, conserved site AYJ59_05255 IPR036412 HAD-like superfamily AYJ59_05255 IPR023214 HAD superfamily AYJ59_05275 IPR005990 Inosine-5'-monophosphate dehydrogenase AYJ59_05275 IPR000644 CBS domain AYJ59_05275 IPR013785 Aldolase-type TIM barrel AYJ59_05275 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AYJ59_05275 IPR001093 IMP dehydrogenase/GMP reductase AYJ59_05280 IPR025777 GMP synthetase ATP pyrophosphatase domain AYJ59_05280 IPR029062 Class I glutamine amidotransferase-like AYJ59_05280 IPR017926 Glutamine amidotransferase AYJ59_05280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_05280 IPR001674 GMP synthase, C-terminal AYJ59_05280 IPR022310 NAD/GMP synthase AYJ59_05280 IPR022955 GMP synthase AYJ59_05280 IPR004739 GMP synthase, glutamine amidotransferase AYJ59_05285 IPR028883 tRNA-specific adenosine deaminase AYJ59_05285 IPR002125 Cytidine and deoxycytidylate deaminase domain AYJ59_05285 IPR016193 Cytidine deaminase-like AYJ59_05285 IPR016192 APOBEC/CMP deaminase, zinc-binding AYJ59_05290 IPR038592 CheD-like superfamily AYJ59_05290 IPR011324 Cytotoxic necrotizing factor-like, catalytic AYJ59_05290 IPR005659 Chemoreceptor glutamine deamidase CheD AYJ59_05295 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_05295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_05295 IPR004105 Histidine kinase CheA-like, homodimeric domain AYJ59_05295 IPR002545 CheW-like domain AYJ59_05295 IPR036061 CheW-like domain superfamily AYJ59_05295 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AYJ59_05295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_05295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_05295 IPR005467 Histidine kinase domain AYJ59_05295 IPR036641 HPT domain superfamily AYJ59_05295 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_05310 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_05310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_05310 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_05310 IPR037196 HSP90, C-terminal domain AYJ59_05310 IPR019805 Heat shock protein Hsp90, conserved site AYJ59_05310 IPR001404 Heat shock protein Hsp90 family AYJ59_05310 IPR020575 Heat shock protein Hsp90, N-terminal AYJ59_05315 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ59_05315 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ59_05315 IPR036291 NAD(P)-binding domain superfamily AYJ59_05315 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AYJ59_05315 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AYJ59_05320 IPR032781 ABC-transporter extension domain AYJ59_05320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05320 IPR003593 AAA+ ATPase domain AYJ59_05320 IPR003439 ABC transporter-like AYJ59_05335 IPR001296 Glycosyl transferase, family 1 AYJ59_05335 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AYJ59_05345 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AYJ59_05345 IPR001296 Glycosyl transferase, family 1 AYJ59_05345 IPR017814 Mycothiol biosynthesis protein, MshA AYJ59_05355 IPR000829 DAGK family AYJ59_05355 IPR033718 Diacylglycerol kinase, prokaryotic AYJ59_05355 IPR036945 Diacylglycerol kinase (DAGK) superfamily AYJ59_05360 IPR004215 Prokaryotic glutathione synthetase, N-terminal AYJ59_05360 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_05360 IPR006284 Glutathione synthetase, prokaryotic AYJ59_05360 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AYJ59_05360 IPR011761 ATP-grasp fold AYJ59_05360 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_05370 IPR011990 Tetratricopeptide-like helical domain superfamily AYJ59_05370 IPR013766 Thioredoxin domain AYJ59_05370 IPR036249 Thioredoxin-like superfamily AYJ59_05375 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AYJ59_05375 IPR007860 DNA mismatch repair protein MutS, connector domain AYJ59_05375 IPR036678 MutS, connector domain superfamily AYJ59_05375 IPR007696 DNA mismatch repair protein MutS, core AYJ59_05375 IPR007861 DNA mismatch repair protein MutS, clamp AYJ59_05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05375 IPR000432 DNA mismatch repair protein MutS, C-terminal AYJ59_05375 IPR017261 DNA mismatch repair protein MutS/MSH AYJ59_05375 IPR016151 DNA mismatch repair protein MutS, N-terminal AYJ59_05375 IPR005748 DNA mismatch repair protein MutS AYJ59_05375 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AYJ59_05380 IPR008136 CinA, C-terminal AYJ59_05380 IPR036653 CinA-like, C-terminal AYJ59_05385 IPR013765 DNA recombination and repair protein RecA AYJ59_05385 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AYJ59_05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05385 IPR020584 DNA recombination/repair protein RecA, conserved site AYJ59_05385 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface AYJ59_05385 IPR003593 AAA+ ATPase domain AYJ59_05385 IPR023400 DNA recombination and repair protein RecA, C-terminal AYJ59_05390 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_05390 IPR003783 Regulatory protein RecX AYJ59_05395 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AYJ59_05395 IPR003156 DHHA1 domain AYJ59_05395 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AYJ59_05395 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_05395 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AYJ59_05395 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AYJ59_05395 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AYJ59_05395 IPR002318 Alanine-tRNA ligase, class IIc AYJ59_05395 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AYJ59_05400 IPR018042 Aspartate kinase, conserved site AYJ59_05400 IPR002912 ACT domain AYJ59_05400 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_05400 IPR005260 Aspartate kinase, monofunctional class AYJ59_05400 IPR027795 CASTOR, ACT domain AYJ59_05400 IPR001341 Aspartate kinase AYJ59_05400 IPR041740 Aspartokinase catalytic domain AYJ59_05400 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_05405 IPR003751 Translational regulator CsrA AYJ59_05405 IPR036107 Carbon storage regulator superfamily AYJ59_05415 IPR035919 EAL domain superfamily AYJ59_05415 IPR000160 GGDEF domain AYJ59_05415 IPR029787 Nucleotide cyclase AYJ59_05415 IPR005330 MHYT domain AYJ59_05415 IPR001633 EAL domain AYJ59_05425 IPR010920 LSM domain superfamily AYJ59_05425 IPR011066 Mechanosensitive ion channel MscS, C-terminal AYJ59_05425 IPR006686 Mechanosensitive ion channel MscS, conserved site AYJ59_05425 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AYJ59_05425 IPR023408 Mechanosensitive ion channel MscS domain superfamily AYJ59_05425 IPR008910 Conserved TM helix AYJ59_05425 IPR006685 Mechanosensitive ion channel MscS AYJ59_05430 IPR000023 Phosphofructokinase domain AYJ59_05430 IPR035966 Phosphofructokinase superfamily AYJ59_05430 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 AYJ59_05430 IPR022953 ATP-dependent 6-phosphofructokinase AYJ59_05435 IPR002121 HRDC domain AYJ59_05435 IPR036397 Ribonuclease H superfamily AYJ59_05435 IPR012337 Ribonuclease H-like superfamily AYJ59_05435 IPR002562 3'-5' exonuclease domain AYJ59_05435 IPR010997 HRDC-like superfamily AYJ59_05435 IPR006292 Ribonuclease D AYJ59_05440 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_05440 IPR004101 Mur ligase, C-terminal AYJ59_05440 IPR000713 Mur ligase, N-terminal catalytic domain AYJ59_05440 IPR036565 Mur-like, catalytic domain superfamily AYJ59_05440 IPR005757 Murein peptide ligase AYJ59_05440 IPR013221 Mur ligase, central AYJ59_05450 IPR007411 Elongation factor P hydroxylase AYJ59_05455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_05455 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AYJ59_05455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_05455 IPR005814 Aminotransferase class-III AYJ59_05455 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_05465 IPR004788 Ribose 5-phosphate isomerase, type A AYJ59_05465 IPR037171 NagB/RpiA transferase-like AYJ59_05465 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AYJ59_05480 IPR003782 Copper chaperone SCO1/SenC AYJ59_05480 IPR036249 Thioredoxin-like superfamily AYJ59_05490 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ59_05490 IPR005787 Threonine dehydratase, biosynthetic AYJ59_05490 IPR001721 Threonine dehydratase, ACT-like domain AYJ59_05490 IPR038110 Threonine dehydratase, ACT-like domain superfamily AYJ59_05490 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AYJ59_05490 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ59_05495 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AYJ59_05495 IPR002698 5-formyltetrahydrofolate cyclo-ligase AYJ59_05495 IPR037171 NagB/RpiA transferase-like AYJ59_05505 IPR011978 Uncharacterised protein family UPF0149 AYJ59_05505 IPR036255 YgfB-like superfamily AYJ59_05510 IPR007865 Aminopeptidase P, N-terminal AYJ59_05510 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ59_05510 IPR036005 Creatinase/aminopeptidase-like AYJ59_05510 IPR000994 Peptidase M24 AYJ59_05510 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AYJ59_05515 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase AYJ59_05515 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AYJ59_05515 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_05515 IPR002938 FAD-binding domain AYJ59_05515 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AYJ59_05520 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_05520 IPR002938 FAD-binding domain AYJ59_05520 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AYJ59_05520 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AYJ59_05525 IPR013099 Potassium channel domain AYJ59_05525 IPR028325 Voltage-gated potassium channel AYJ59_05530 IPR005119 LysR, substrate-binding AYJ59_05530 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_05530 IPR000847 Transcription regulator HTH, LysR AYJ59_05530 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_05535 IPR002716 PIN domain AYJ59_05535 IPR003714 PhoH-like protein AYJ59_05535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05535 IPR029060 PIN-like domain superfamily AYJ59_05540 IPR013766 Thioredoxin domain AYJ59_05540 IPR036249 Thioredoxin-like superfamily AYJ59_05540 IPR024706 Peroxiredoxin, AhpC-type AYJ59_05540 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AYJ59_05545 IPR013785 Aldolase-type TIM barrel AYJ59_05545 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AYJ59_05545 IPR002220 DapA-like AYJ59_05545 IPR020624 Schiff base-forming aldolase, conserved site AYJ59_05545 IPR020625 Schiff base-forming aldolase, active site AYJ59_05555 IPR036921 PurM-like, N-terminal domain superfamily AYJ59_05555 IPR036676 PurM-like, C-terminal domain superfamily AYJ59_05555 IPR010918 PurM-like, C-terminal domain AYJ59_05555 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AYJ59_05555 IPR017926 Glutamine amidotransferase AYJ59_05555 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AYJ59_05555 IPR029062 Class I glutamine amidotransferase-like AYJ59_05555 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal AYJ59_05555 IPR010073 Phosphoribosylformylglycinamidine synthase PurL AYJ59_05565 IPR003111 Lon, substrate-binding domain AYJ59_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05565 IPR008269 Peptidase S16, Lon proteolytic domain AYJ59_05565 IPR003593 AAA+ ATPase domain AYJ59_05565 IPR003959 ATPase, AAA-type, core AYJ59_05565 IPR015947 PUA-like superfamily AYJ59_05565 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_05565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_05565 IPR027543 Lon protease, bacterial AYJ59_05565 IPR004815 Lon protease, bacterial/eukaryotic-type AYJ59_05565 IPR008268 Peptidase S16, active site AYJ59_05565 IPR027065 Lon protease AYJ59_05570 IPR008284 Molybdenum cofactor biosynthesis, conserved site AYJ59_05570 IPR001453 MoaB/Mog domain AYJ59_05570 IPR036425 MoaB/Mog-like domain superfamily AYJ59_05575 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_05575 IPR004556 Methyltransferase HemK-like AYJ59_05575 IPR007848 Methyltransferase small domain AYJ59_05575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_05575 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AYJ59_05580 IPR036398 Alpha carbonic anhydrase domain superfamily AYJ59_05580 IPR023561 Carbonic anhydrase, alpha-class AYJ59_05580 IPR018338 Carbonic anhydrase, alpha-class, conserved site AYJ59_05580 IPR041891 Carbonic anhydrase, prokaryotic-like AYJ59_05580 IPR001148 Alpha carbonic anhydrase domain AYJ59_05595 IPR005532 Sulfatase-modifying factor enzyme AYJ59_05595 IPR017806 Ergothioneine biosynthesis protein EgtB AYJ59_05595 IPR034660 DinB/YfiT-like putative metalloenzymes AYJ59_05595 IPR024775 DinB-like domain AYJ59_05595 IPR016187 C-type lectin fold AYJ59_05595 IPR042095 Sulfatase-modifying factor enzyme superfamily AYJ59_05595 IPR032890 Hercynine oxygenase, Actinobacteria AYJ59_05600 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_05600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_05600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_05600 IPR027619 Putative C-S lyase AYJ59_05600 IPR004839 Aminotransferase, class I/classII AYJ59_05605 IPR029132 Choloylglycine hydrolase/NAAA C-terminal AYJ59_05605 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_05615 IPR036812 NADP-dependent oxidoreductase domain superfamily AYJ59_05615 IPR020471 Aldo/keto reductase AYJ59_05615 IPR023210 NADP-dependent oxidoreductase domain AYJ59_05635 IPR035904 Chorismate synthase AroC superfamily AYJ59_05635 IPR000453 Chorismate synthase AYJ59_05635 IPR020541 Chorismate synthase, conserved site AYJ59_05650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_05650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_05650 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_05650 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AYJ59_05650 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AYJ59_05655 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ59_05655 IPR004361 Glyoxalase I AYJ59_05655 IPR018146 Glyoxalase I, conserved site AYJ59_05655 IPR037523 Vicinal oxygen chelate (VOC) domain AYJ59_05655 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ59_05665 IPR011051 RmlC-like cupin domain superfamily AYJ59_05665 IPR014710 RmlC-like jelly roll fold AYJ59_05665 IPR009664 Pyrimidine/purine nucleoside phosphorylase AYJ59_05670 IPR002645 STAS domain AYJ59_05670 IPR011547 SLC26A/SulP transporter domain AYJ59_05670 IPR018045 Sulphate anion transporter, conserved site AYJ59_05670 IPR036513 STAS domain superfamily AYJ59_05670 IPR001902 SLC26A/SulP transporter AYJ59_05675 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_05675 IPR001036 Acriflavin resistance protein AYJ59_05675 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AYJ59_05680 IPR006143 RND efflux pump, membrane fusion protein AYJ59_05680 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_05685 IPR024109 Tryptophan-tRNA ligase, bacterial-type AYJ59_05685 IPR002306 Tryptophan-tRNA ligase AYJ59_05685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_05685 IPR002305 Aminoacyl-tRNA synthetase, class Ic AYJ59_05685 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_05690 IPR025866 Polymerase A arginine-rich C-terminal domain AYJ59_05690 IPR002646 Poly A polymerase, head domain AYJ59_05690 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AYJ59_05690 IPR010206 Poly(A) polymerase I AYJ59_05695 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AYJ59_05695 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AYJ59_05700 IPR003700 Ketopantoate hydroxymethyltransferase AYJ59_05700 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_05700 IPR040442 Pyruvate kinase-like domain superfamily AYJ59_05705 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AYJ59_05705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_05705 IPR004821 Cytidyltransferase-like domain AYJ59_05705 IPR003721 Pantoate-beta-alanine ligase AYJ59_05710 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_05710 IPR000540 Flagellar motor protein MotA, conserved site AYJ59_05715 IPR036737 OmpA-like domain superfamily AYJ59_05715 IPR025713 Motility protein B, N-terminal domain AYJ59_05715 IPR006665 OmpA-like domain AYJ59_05720 IPR009010 Aspartate decarboxylase-like domain superfamily AYJ59_05720 IPR003190 Aspartate decarboxylase AYJ59_05725 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_05725 IPR033129 Phosphoenolpyruvate carboxylase, His active site AYJ59_05725 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site AYJ59_05725 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AYJ59_05725 IPR021135 Phosphoenolpyruvate carboxylase AYJ59_05735 IPR011917 ABC transporter, lipid A export, MsbA AYJ59_05735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_05735 IPR017871 ABC transporter, conserved site AYJ59_05735 IPR003439 ABC transporter-like AYJ59_05735 IPR036640 ABC transporter type 1, transmembrane domain superfamily AYJ59_05735 IPR011527 ABC transporter type 1, transmembrane domain AYJ59_05735 IPR003593 AAA+ ATPase domain AYJ59_05735 IPR039421 Type I protein exporter AYJ59_05745 IPR036291 NAD(P)-binding domain superfamily AYJ59_05745 IPR001509 NAD-dependent epimerase/dehydratase AYJ59_05745 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase AYJ59_05750 IPR011908 Lipopolysaccharide heptosyltransferase I AYJ59_05750 IPR002201 Glycosyl transferase, family 9 AYJ59_05775 IPR001296 Glycosyl transferase, family 1 AYJ59_05775 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AYJ59_05785 IPR011908 Lipopolysaccharide heptosyltransferase I AYJ59_05785 IPR002201 Glycosyl transferase, family 9 AYJ59_05790 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AYJ59_05790 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AYJ59_05790 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AYJ59_05790 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AYJ59_05790 IPR036291 NAD(P)-binding domain superfamily AYJ59_05790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_05790 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AYJ59_05790 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AYJ59_05795 IPR036291 NAD(P)-binding domain superfamily AYJ59_05795 IPR001509 NAD-dependent epimerase/dehydratase AYJ59_05805 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ59_05805 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AYJ59_05810 IPR003029 S1 domain AYJ59_05810 IPR022967 RNA-binding domain, S1 AYJ59_05810 IPR012340 Nucleic acid-binding, OB-fold AYJ59_05810 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AYJ59_05810 IPR004659 Ribonuclease E/G AYJ59_05855 IPR002300 Aminoacyl-tRNA synthetase, class Ia AYJ59_05855 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AYJ59_05855 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AYJ59_05855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_05855 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_05855 IPR002303 Valine-tRNA ligase AYJ59_05855 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AYJ59_05855 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AYJ59_05855 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AYJ59_05855 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AYJ59_05855 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_05860 IPR001029 Flagellin, D0/D1 domain AYJ59_05860 IPR001492 Flagellin AYJ59_05860 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_05870 IPR024041 Ammonium transporter AmtB-like domain AYJ59_05870 IPR001905 Ammonium transporter AYJ59_05870 IPR029020 Ammonium/urea transporter AYJ59_05870 IPR018047 Ammonium transporter, conserved site AYJ59_05875 IPR002187 Nitrogen regulatory protein PII AYJ59_05875 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ59_05875 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ59_05875 IPR017918 Nitrogen regulatory protein PII, conserved site AYJ59_05875 IPR002332 Nitrogen regulatory protein P-II, urydylation site AYJ59_05885 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AYJ59_05885 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AYJ59_05885 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AYJ59_05890 IPR036649 Inorganic pyrophosphatase superfamily AYJ59_05890 IPR008162 Inorganic pyrophosphatase AYJ59_05895 IPR028343 Fructose-1,6-bisphosphatase AYJ59_05895 IPR000146 Fructose-1,6-bisphosphatase class 1 AYJ59_05895 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal AYJ59_05905 IPR036873 Rhodanese-like domain superfamily AYJ59_05905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_05905 IPR026340 Thiazole biosynthesis domain AYJ59_05905 IPR020536 Thil, AANH domain AYJ59_05905 IPR004114 THUMP domain AYJ59_05905 IPR001763 Rhodanese-like domain AYJ59_05905 IPR003720 tRNA sulfurtransferase ThiI AYJ59_05910 IPR023346 Lysozyme-like domain superfamily AYJ59_05910 IPR000189 Prokaryotic transglycosylase, active site AYJ59_05910 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AYJ59_05910 IPR008258 Transglycosylase SLT domain 1 AYJ59_05910 IPR023703 Membrane-bound lytic murein transglycosylase F AYJ59_05915 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AYJ59_05915 IPR006258 Dihydrolipoamide dehydrogenase AYJ59_05915 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AYJ59_05915 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_05915 IPR023753 FAD/NAD(P)-binding domain AYJ59_05915 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AYJ59_05915 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ59_05920 IPR013668 Ribonuclease R winged-helix domain AYJ59_05920 IPR011129 Cold shock domain AYJ59_05920 IPR040476 RNase II/RNase R, cold shock domain AYJ59_05920 IPR012340 Nucleic acid-binding, OB-fold AYJ59_05920 IPR001900 Ribonuclease II/R AYJ59_05920 IPR022966 Ribonuclease II/R, conserved site AYJ59_05920 IPR004476 Ribonuclease II/ribonuclease R AYJ59_05920 IPR003029 S1 domain AYJ59_05920 IPR022967 RNA-binding domain, S1 AYJ59_05920 IPR013223 Ribonuclease B, N-terminal OB domain AYJ59_05920 IPR011805 Ribonuclease R AYJ59_05925 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AYJ59_05925 IPR029028 Alpha/beta knot methyltransferases AYJ59_05925 IPR004441 RNA methyltransferase TrmH family AYJ59_05925 IPR001537 tRNA/rRNA methyltransferase, SpoU type AYJ59_05925 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AYJ59_05925 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_05925 IPR029064 50S ribosomal protein L30e-like AYJ59_05930 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AYJ59_05930 IPR029056 Ribokinase-like AYJ59_05930 IPR011611 Carbohydrate kinase PfkB AYJ59_05935 IPR018490 Cyclic nucleotide-binding-like AYJ59_05935 IPR012318 Crp-type HTH domain AYJ59_05935 IPR000595 Cyclic nucleotide-binding domain AYJ59_05935 IPR018335 Transcription regulator HTH, Crp-type, conserved site AYJ59_05935 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_05935 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_05935 IPR014710 RmlC-like jelly roll fold AYJ59_05940 IPR039001 Peptidoglycan-associated lipoprotein AYJ59_05940 IPR036737 OmpA-like domain superfamily AYJ59_05940 IPR006690 Outer membrane protein, OmpA-like, conserved site AYJ59_05940 IPR006665 OmpA-like domain AYJ59_05940 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AYJ59_05940 IPR006664 Outer membrane protein, bacterial AYJ59_05945 IPR042097 Aminopeptidase N-like , N-terminal AYJ59_05945 IPR012779 Peptidase M1, alanyl aminopeptidase AYJ59_05945 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AYJ59_05945 IPR014782 Peptidase M1, membrane alanine aminopeptidase AYJ59_05945 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AYJ59_05945 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AYJ59_05945 IPR027268 Peptidase M4/M1, CTD superfamily AYJ59_05945 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AYJ59_05945 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AYJ59_05990 IPR002545 CheW-like domain AYJ59_05990 IPR011006 CheY-like superfamily AYJ59_05990 IPR036061 CheW-like domain superfamily AYJ59_05990 IPR001789 Signal transduction response regulator, receiver domain AYJ59_05990 IPR024181 Chemotaxis response regulator CheV AYJ59_06000 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06000 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06000 IPR006300 Flagellar basal-body rod protein FlgB AYJ59_06005 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06005 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06005 IPR006299 Flagellar basal-body rod protein FlgC AYJ59_06005 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AYJ59_06010 IPR005648 Flagellar hook capping protein AYJ59_06015 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AYJ59_06015 IPR011491 Flagellar hook protein FlgE AYJ59_06015 IPR037058 Flagellar hook protein FlgE superfamily AYJ59_06015 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06015 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AYJ59_06015 IPR010810 Flagellin hook, IN motif AYJ59_06015 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AYJ59_06015 IPR012835 Flagellar hook FlgE AYJ59_06020 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06020 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06020 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AYJ59_06020 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AYJ59_06020 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AYJ59_06025 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06025 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AYJ59_06025 IPR012834 Flagellar basal-body rod FlgG AYJ59_06025 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AYJ59_06025 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AYJ59_06025 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06030 IPR000527 Flagellar L-ring protein AYJ59_06035 IPR001782 Flagellar P-ring protein AYJ59_06040 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AYJ59_06040 IPR023346 Lysozyme-like domain superfamily AYJ59_06040 IPR013377 Peptidoglycan hydrolase FlgJ AYJ59_06040 IPR019301 Flagellar protein FlgJ, N-terminal AYJ59_06045 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06045 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06045 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AYJ59_06045 IPR002371 Flagellar hook-associated protein 1 AYJ59_06050 IPR001029 Flagellin, D0/D1 domain AYJ59_06050 IPR001444 Flagellar basal body rod protein, N-terminal AYJ59_06050 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_06050 IPR001492 Flagellin AYJ59_06050 IPR019776 Flagellar basal body rod protein, conserved site AYJ59_06055 IPR023346 Lysozyme-like domain superfamily AYJ59_06055 IPR008258 Transglycosylase SLT domain 1 AYJ59_06055 IPR000189 Prokaryotic transglycosylase, active site AYJ59_06055 IPR024570 Murein transglycosylase-C, N-terminal AYJ59_06055 IPR023664 Murein transglycosylase-C AYJ59_06060 IPR036291 NAD(P)-binding domain superfamily AYJ59_06060 IPR001509 NAD-dependent epimerase/dehydratase AYJ59_06065 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AYJ59_06065 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_06065 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_06065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_06075 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal AYJ59_06075 IPR013785 Aldolase-type TIM barrel AYJ59_06075 IPR020007 N-acetylneuraminate synthase AYJ59_06075 IPR013132 N-acetylneuraminic acid synthase, N-terminal AYJ59_06075 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily AYJ59_06075 IPR013974 SAF domain AYJ59_06080 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing AYJ59_06080 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain AYJ59_06080 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like AYJ59_06100 IPR013785 Aldolase-type TIM barrel AYJ59_06100 IPR006062 Histidine biosynthesis AYJ59_06100 IPR011060 Ribulose-phosphate binding barrel AYJ59_06100 IPR004651 Histidine biosynthesis, HisF AYJ59_06105 IPR010139 Imidazole glycerol phosphate synthase, subunit H AYJ59_06105 IPR017926 Glutamine amidotransferase AYJ59_06105 IPR029062 Class I glutamine amidotransferase-like AYJ59_06125 IPR003329 Acylneuraminate cytidylyltransferase AYJ59_06125 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_06130 IPR005835 Nucleotidyl transferase domain AYJ59_06130 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria AYJ59_06130 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_06140 IPR001492 Flagellin AYJ59_06140 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_06140 IPR001029 Flagellin, D0/D1 domain AYJ59_06145 IPR035924 FlaG-like superfamily AYJ59_06145 IPR005186 FlaG protein AYJ59_06150 IPR001029 Flagellin, D0/D1 domain AYJ59_06150 IPR001492 Flagellin AYJ59_06150 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_06160 IPR001029 Flagellin, D0/D1 domain AYJ59_06160 IPR001492 Flagellin AYJ59_06160 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_06165 IPR001029 Flagellin, D0/D1 domain AYJ59_06165 IPR042187 Flagellin, C-terminal domain, subdomain 2 AYJ59_06165 IPR001492 Flagellin AYJ59_06170 IPR010810 Flagellin hook, IN motif AYJ59_06170 IPR040026 Flagellar hook-associated protein 2 AYJ59_06170 IPR010809 Flagellar hook-associated protein 2, C-terminal AYJ59_06170 IPR003481 Flagellar hook-associated protein 2, N-terminal AYJ59_06175 IPR036584 Flagellar protein FliS superfamily AYJ59_06175 IPR003713 Flagellar protein FliS AYJ59_06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06185 IPR011006 CheY-like superfamily AYJ59_06185 IPR009057 Homeobox-like domain superfamily AYJ59_06185 IPR002197 DNA binding HTH domain, Fis-type AYJ59_06185 IPR001789 Signal transduction response regulator, receiver domain AYJ59_06185 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_06185 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_06185 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_06185 IPR010114 DNA-binding transcriptional regulator NtrC AYJ59_06185 IPR003593 AAA+ ATPase domain AYJ59_06185 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_06190 IPR000014 PAS domain AYJ59_06190 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_06190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_06190 IPR003660 HAMP domain AYJ59_06190 IPR035965 PAS domain superfamily AYJ59_06190 IPR000700 PAS-associated, C-terminal AYJ59_06190 IPR013767 PAS fold AYJ59_06190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_06190 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_06190 IPR005467 Histidine kinase domain AYJ59_06190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_06195 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_06195 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_06195 IPR003593 AAA+ ATPase domain AYJ59_06195 IPR001789 Signal transduction response regulator, receiver domain AYJ59_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06195 IPR002197 DNA binding HTH domain, Fis-type AYJ59_06195 IPR011006 CheY-like superfamily AYJ59_06195 IPR009057 Homeobox-like domain superfamily AYJ59_06195 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_06195 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_06200 IPR001624 Flagellar hook-basal body complex protein FliE AYJ59_06205 IPR000067 Flagellar M-ring protein FliF AYJ59_06205 IPR013556 Flagellar M-ring C-terminal AYJ59_06205 IPR006182 Secretory protein YscJ/FliF AYJ59_06210 IPR023087 Flagellar motor switch protein FliG, C-terminal AYJ59_06210 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AYJ59_06210 IPR032779 Flagellar motor switch protein FliG, middle domain AYJ59_06210 IPR000090 Flagellar motor switch protein FliG AYJ59_06210 IPR011002 Flagellar motor switch protein FliG, alpha-helical AYJ59_06220 IPR003593 AAA+ ATPase domain AYJ59_06220 IPR020005 Flagellar export ATPase FliI, clade 1 AYJ59_06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06220 IPR032463 ATPase, type III secretion system, FliI AYJ59_06220 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AYJ59_06220 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AYJ59_06220 IPR040627 T3SS EscN ATPase, C-terminal AYJ59_06220 IPR005714 ATPase, type III secretion system, FliI/YscN AYJ59_06235 IPR003660 HAMP domain AYJ59_06235 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_06235 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_06240 IPR000540 Flagellar motor protein MotA, conserved site AYJ59_06240 IPR022522 Flagellar motor stator, MotA AYJ59_06240 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_06245 IPR036737 OmpA-like domain superfamily AYJ59_06245 IPR006665 OmpA-like domain AYJ59_06245 IPR025713 Motility protein B, N-terminal domain AYJ59_06255 IPR036429 SpoA-like superfamily AYJ59_06255 IPR001543 Surface presentation of antigen (SpoA) AYJ59_06255 IPR001689 Flagellar motor switch protein FliM AYJ59_06255 IPR028976 CheC-like superfamily AYJ59_06260 IPR012826 Flagellar motor switch FliN AYJ59_06260 IPR036429 SpoA-like superfamily AYJ59_06260 IPR001543 Surface presentation of antigen (SpoA) AYJ59_06260 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AYJ59_06275 IPR000037 SsrA-binding protein AYJ59_06275 IPR023620 Small protein B AYJ59_06275 IPR020081 SsrA-binding protein, conserved site AYJ59_06280 IPR005031 Coenzyme Q-binding protein COQ10, START domain AYJ59_06280 IPR023393 START-like domain superfamily AYJ59_06285 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ59_06285 IPR005346 RnfH protein AYJ59_06285 IPR037021 RnfH superfamily AYJ59_06295 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_06295 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_06295 IPR002481 Ferric-uptake regulator AYJ59_06300 IPR029787 Nucleotide cyclase AYJ59_06300 IPR035965 PAS domain superfamily AYJ59_06300 IPR001633 EAL domain AYJ59_06300 IPR000160 GGDEF domain AYJ59_06300 IPR035919 EAL domain superfamily AYJ59_06300 IPR005330 MHYT domain AYJ59_06305 IPR022374 Energy-dependent translational throttle protein EttA AYJ59_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06305 IPR017871 ABC transporter, conserved site AYJ59_06305 IPR032781 ABC-transporter extension domain AYJ59_06305 IPR003593 AAA+ ATPase domain AYJ59_06305 IPR003439 ABC transporter-like AYJ59_06310 IPR039429 Serine hydroxymethyltransferase-like domain AYJ59_06310 IPR001085 Serine hydroxymethyltransferase AYJ59_06310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_06310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_06310 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AYJ59_06310 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_06315 IPR003796 Ribonucleotide reductase regulator NrdR-like AYJ59_06315 IPR005144 ATP-cone domain AYJ59_06320 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AYJ59_06320 IPR011549 Riboflavin-specific deaminase, C-terminal AYJ59_06320 IPR004794 Riboflavin biosynthesis protein RibD AYJ59_06320 IPR016192 APOBEC/CMP deaminase, zinc-binding AYJ59_06320 IPR024072 Dihydrofolate reductase-like domain superfamily AYJ59_06320 IPR016193 Cytidine deaminase-like AYJ59_06320 IPR002125 Cytidine and deoxycytidylate deaminase domain AYJ59_06325 IPR017938 Riboflavin synthase-like beta-barrel AYJ59_06325 IPR026017 Lumazine-binding domain AYJ59_06325 IPR001783 Lumazine-binding protein AYJ59_06325 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AYJ59_06330 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ59_06330 IPR032677 GTP cyclohydrolase II AYJ59_06330 IPR036144 RibA-like superfamily AYJ59_06330 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AYJ59_06335 IPR036467 Lumazine/riboflavin synthase superfamily AYJ59_06335 IPR002180 Lumazine/riboflavin synthase AYJ59_06335 IPR034964 Lumazine synthase AYJ59_06340 IPR011605 NusB antitermination factor AYJ59_06340 IPR006027 NusB/RsmB/TIM44 AYJ59_06340 IPR035926 NusB-like superfamily AYJ59_06345 IPR006283 Thiamine-monophosphate kinase AYJ59_06345 IPR036921 PurM-like, N-terminal domain superfamily AYJ59_06345 IPR010918 PurM-like, C-terminal domain AYJ59_06345 IPR036676 PurM-like, C-terminal domain superfamily AYJ59_06345 IPR016188 PurM-like, N-terminal domain AYJ59_06350 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_06350 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_06350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_06350 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_06350 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_06350 IPR003660 HAMP domain AYJ59_06355 IPR013785 Aldolase-type TIM barrel AYJ59_06355 IPR006218 DAHP synthetase I/KDSA AYJ59_06355 IPR006219 DHAP synthase, class 1 AYJ59_06365 IPR010627 Peptidase A24A, N-terminal AYJ59_06365 IPR000045 Prepilin type IV endopeptidase, peptidase domain AYJ59_06365 IPR014032 Peptidase A24A, prepilin type IV, bacterial AYJ59_06375 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family AYJ59_06375 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily AYJ59_06380 IPR000092 Polyprenyl synthetase AYJ59_06380 IPR033749 Polyprenyl synthetase, conserved site AYJ59_06380 IPR008949 Isoprenoid synthase domain superfamily AYJ59_06385 IPR019479 Peroxiredoxin, C-terminal AYJ59_06385 IPR024706 Peroxiredoxin, AhpC-type AYJ59_06385 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AYJ59_06385 IPR036249 Thioredoxin-like superfamily AYJ59_06385 IPR013766 Thioredoxin domain AYJ59_06400 IPR013766 Thioredoxin domain AYJ59_06400 IPR017937 Thioredoxin, conserved site AYJ59_06400 IPR036249 Thioredoxin-like superfamily AYJ59_06400 IPR005746 Thioredoxin AYJ59_06405 IPR005677 Fumarate hydratase, class II AYJ59_06405 IPR000362 Fumarate lyase family AYJ59_06405 IPR022761 Fumarate lyase, N-terminal AYJ59_06405 IPR008948 L-Aspartase-like AYJ59_06405 IPR024083 Fumarase/histidase, N-terminal AYJ59_06405 IPR020557 Fumarate lyase, conserved site AYJ59_06405 IPR018951 Fumarase C, C-terminal AYJ59_06410 IPR001789 Signal transduction response regulator, receiver domain AYJ59_06410 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_06410 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_06410 IPR011006 CheY-like superfamily AYJ59_06410 IPR035965 PAS domain superfamily AYJ59_06410 IPR015387 LuxQ, periplasmic AYJ59_06410 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_06410 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_06410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_06410 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_06410 IPR005467 Histidine kinase domain AYJ59_06415 IPR011006 CheY-like superfamily AYJ59_06415 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_06415 IPR001789 Signal transduction response regulator, receiver domain AYJ59_06415 IPR000792 Transcription regulator LuxR, C-terminal AYJ59_06445 IPR000160 GGDEF domain AYJ59_06445 IPR033424 Membrane-associated sensor domain AYJ59_06445 IPR029787 Nucleotide cyclase AYJ59_06450 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_06460 IPR016102 Succinyl-CoA synthetase-like AYJ59_06460 IPR005809 Succinate--CoA synthetase, beta subunit AYJ59_06460 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AYJ59_06460 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AYJ59_06460 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_06460 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AYJ59_06460 IPR011761 ATP-grasp fold AYJ59_06465 IPR003781 CoA-binding AYJ59_06465 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AYJ59_06465 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AYJ59_06465 IPR005810 Succinyl-CoA ligase, alpha subunit AYJ59_06465 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AYJ59_06465 IPR036291 NAD(P)-binding domain superfamily AYJ59_06465 IPR016102 Succinyl-CoA synthetase-like AYJ59_06470 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ59_06470 IPR014445 Glutamine-dependent NAD(+) synthetase AYJ59_06470 IPR003694 NAD(+) synthetase AYJ59_06470 IPR022310 NAD/GMP synthase AYJ59_06470 IPR003010 Carbon-nitrogen hydrolase AYJ59_06470 IPR000132 Nitrilase/cyanide hydratase, conserved site AYJ59_06470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_06475 IPR039565 Outer membrane lipoprotein BamD-like AYJ59_06475 IPR017689 Outer membrane protein assembly factor BamD AYJ59_06475 IPR011990 Tetratricopeptide-like helical domain superfamily AYJ59_06480 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_06480 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_06480 IPR006225 Pseudouridine synthase, RluC/RluD AYJ59_06480 IPR036986 RNA-binding S4 domain superfamily AYJ59_06480 IPR002942 RNA-binding S4 domain AYJ59_06480 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_06490 IPR036291 NAD(P)-binding domain superfamily AYJ59_06490 IPR038770 Sodium/solute symporter superfamily AYJ59_06490 IPR006037 Regulator of K+ conductance, C-terminal AYJ59_06490 IPR006153 Cation/H+ exchanger AYJ59_06490 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AYJ59_06490 IPR003148 Regulator of K+ conductance, N-terminal AYJ59_06495 IPR004393 Nicotinate-nucleotide pyrophosphorylase AYJ59_06495 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AYJ59_06495 IPR013785 Aldolase-type TIM barrel AYJ59_06495 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AYJ59_06495 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AYJ59_06495 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AYJ59_06495 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AYJ59_06500 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AYJ59_06500 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AYJ59_06510 IPR029039 Flavoprotein-like superfamily AYJ59_06510 IPR010086 Flavodoxin, long chain AYJ59_06510 IPR008254 Flavodoxin/nitric oxide synthase AYJ59_06510 IPR001226 Flavodoxin, conserved site AYJ59_06515 IPR000529 Ribosomal protein S6 AYJ59_06515 IPR020815 Ribosomal protein S6, conserved site AYJ59_06515 IPR020814 Ribosomal protein S6, plastid/chloroplast AYJ59_06515 IPR035980 Ribosomal protein S6 superfamily AYJ59_06515 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AYJ59_06520 IPR036870 Ribosomal protein S18 superfamily AYJ59_06520 IPR001648 Ribosomal protein S18 AYJ59_06520 IPR018275 Ribosomal protein S18, conserved site AYJ59_06530 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AYJ59_06530 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AYJ59_06530 IPR020070 Ribosomal protein L9, N-terminal AYJ59_06530 IPR000244 Ribosomal protein L9 AYJ59_06530 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AYJ59_06530 IPR020594 Ribosomal protein L9, bacteria/chloroplast AYJ59_06530 IPR020069 Ribosomal protein L9, C-terminal AYJ59_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06535 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AYJ59_06535 IPR007693 DNA helicase, DnaB-like, N-terminal AYJ59_06535 IPR007694 DNA helicase, DnaB-like, C-terminal AYJ59_06535 IPR007692 DNA helicase, DnaB type AYJ59_06535 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AYJ59_06535 IPR003593 AAA+ ATPase domain AYJ59_06540 IPR000821 Alanine racemase AYJ59_06540 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AYJ59_06540 IPR029066 PLP-binding barrel AYJ59_06540 IPR001608 Alanine racemase, N-terminal AYJ59_06540 IPR011079 Alanine racemase, C-terminal AYJ59_06545 IPR004385 Nucleoside diphosphate pyrophosphatase AYJ59_06545 IPR015797 NUDIX hydrolase-like domain superfamily AYJ59_06545 IPR020084 NUDIX hydrolase, conserved site AYJ59_06545 IPR000086 NUDIX hydrolase domain AYJ59_06555 IPR002528 Multi antimicrobial extrusion protein AYJ59_06560 IPR004027 SEC-C motif AYJ59_06560 IPR023006 Uncharacterised protein family UPF0225 AYJ59_06560 IPR032710 NTF2-like domain superfamily AYJ59_06590 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_06590 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_06590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_06590 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_06590 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_06590 IPR003660 HAMP domain AYJ59_06595 IPR011851 Sodium/proline symporter AYJ59_06595 IPR038377 Sodium/glucose symporter superfamily AYJ59_06595 IPR001734 Sodium/solute symporter AYJ59_06595 IPR018212 Sodium/solute symporter, conserved site AYJ59_06610 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AYJ59_06610 IPR042118 QueA, domain 1 AYJ59_06610 IPR042119 QueA, domain 2 AYJ59_06610 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AYJ59_06615 IPR036511 Queuine tRNA-ribosyltransferase-like AYJ59_06615 IPR004803 tRNA-guanine transglycosylase AYJ59_06615 IPR002616 tRNA-guanine(15) transglycosylase-like AYJ59_06620 IPR003849 Preprotein translocase YajC AYJ59_06625 IPR027398 SecD export protein N-terminal TM domain AYJ59_06625 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AYJ59_06625 IPR001036 Acriflavin resistance protein AYJ59_06625 IPR005791 Protein translocase subunit SecD AYJ59_06625 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AYJ59_06625 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ59_06630 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AYJ59_06630 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AYJ59_06630 IPR005665 Protein-export membrane protein SecF, bacterial AYJ59_06630 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AYJ59_06640 IPR006508 Pseudouridine synthase, RluA-like AYJ59_06640 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_06640 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_06640 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_06645 IPR008228 Uncharacterised conserved protein UCP006173 AYJ59_06645 IPR005358 Putative zinc- or iron-chelating domain containing protein AYJ59_06650 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_06665 IPR007197 Radical SAM AYJ59_06665 IPR006638 Elp3/MiaB/NifB AYJ59_06665 IPR005839 Methylthiotransferase AYJ59_06665 IPR020612 Methylthiotransferase, conserved site AYJ59_06665 IPR013848 Methylthiotransferase, N-terminal AYJ59_06665 IPR005840 Ribosomal protein S12 methylthiotransferase RimO AYJ59_06665 IPR041582 RimO, TRAM domain AYJ59_06665 IPR038135 Methylthiotransferase, N-terminal domain superfamily AYJ59_06665 IPR002792 TRAM domain AYJ59_06665 IPR023404 Radical SAM, alpha/beta horseshoe AYJ59_06670 IPR013766 Thioredoxin domain AYJ59_06670 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AYJ59_06670 IPR024706 Peroxiredoxin, AhpC-type AYJ59_06670 IPR019479 Peroxiredoxin, C-terminal AYJ59_06670 IPR022915 Peroxiredoxin, TDXH subfamily AYJ59_06670 IPR036249 Thioredoxin-like superfamily AYJ59_06690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_06690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_06715 IPR005856 Cysteine synthase AYJ59_06715 IPR005858 Cysteine synthase CysM AYJ59_06715 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ59_06715 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AYJ59_06715 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ59_06730 IPR023765 Solute-binding protein family 5, conserved site AYJ59_06730 IPR000914 Solute-binding protein family 5 domain AYJ59_06730 IPR039424 Solute-binding protein family 5 AYJ59_06730 IPR030678 Peptide/nickel binding protein, MppA-type AYJ59_06735 IPR014509 Uncharacterised conserved protein UCP020606 AYJ59_06750 IPR035906 MetI-like superfamily AYJ59_06750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_06760 IPR000160 GGDEF domain AYJ59_06760 IPR035919 EAL domain superfamily AYJ59_06760 IPR029787 Nucleotide cyclase AYJ59_06760 IPR005330 MHYT domain AYJ59_06760 IPR001633 EAL domain AYJ59_06765 IPR001764 Glycoside hydrolase, family 3, N-terminal AYJ59_06765 IPR022956 Beta-hexosaminidase, bacterial AYJ59_06765 IPR017853 Glycoside hydrolase superfamily AYJ59_06765 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AYJ59_06770 IPR006685 Mechanosensitive ion channel MscS AYJ59_06770 IPR023408 Mechanosensitive ion channel MscS domain superfamily AYJ59_06770 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AYJ59_06770 IPR010920 LSM domain superfamily AYJ59_06770 IPR006686 Mechanosensitive ion channel MscS, conserved site AYJ59_06770 IPR011066 Mechanosensitive ion channel MscS, C-terminal AYJ59_06775 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AYJ59_06775 IPR016166 FAD-binding domain, PCMH-type AYJ59_06775 IPR036318 FAD-binding, type PCMH-like superfamily AYJ59_06775 IPR016167 FAD-binding, type PCMH, subdomain 1 AYJ59_06775 IPR006094 FAD linked oxidase, N-terminal AYJ59_06775 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AYJ59_06775 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ59_06775 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AYJ59_06780 IPR037272 Sodium:neurotransmitter symporter superfamily AYJ59_06780 IPR000175 Sodium:neurotransmitter symporter AYJ59_06795 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AYJ59_06795 IPR002933 Peptidase M20 AYJ59_06795 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AYJ59_06795 IPR036264 Bacterial exopeptidase dimerisation domain AYJ59_06795 IPR011650 Peptidase M20, dimerisation domain AYJ59_06800 IPR006504 Transcriptional regulator Spx/MgsR AYJ59_06800 IPR036249 Thioredoxin-like superfamily AYJ59_06800 IPR006660 Arsenate reductase-like AYJ59_06805 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain AYJ59_06805 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily AYJ59_06805 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family AYJ59_06805 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria AYJ59_06805 IPR001451 Hexapeptide repeat AYJ59_06805 IPR011004 Trimeric LpxA-like superfamily AYJ59_06810 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AYJ59_06810 IPR018146 Glyoxalase I, conserved site AYJ59_06810 IPR037523 Vicinal oxygen chelate (VOC) domain AYJ59_06810 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AYJ59_06815 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AYJ59_06815 IPR002934 Polymerase, nucleotidyl transferase domain AYJ59_06815 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AYJ59_06815 IPR006674 HD domain AYJ59_06815 IPR003607 HD/PDEase domain AYJ59_06815 IPR002912 ACT domain AYJ59_06820 IPR036005 Creatinase/aminopeptidase-like AYJ59_06820 IPR000994 Peptidase M24 AYJ59_06820 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AYJ59_06820 IPR001714 Peptidase M24, methionine aminopeptidase AYJ59_06825 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AYJ59_06825 IPR018130 Ribosomal protein S2, conserved site AYJ59_06825 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AYJ59_06825 IPR001865 Ribosomal protein S2 AYJ59_06830 IPR009060 UBA-like superfamily AYJ59_06830 IPR018101 Translation elongation factor Ts, conserved site AYJ59_06830 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AYJ59_06830 IPR001816 Translation elongation factor EFTs/EF1B AYJ59_06830 IPR036402 Elongation factor Ts, dimerisation domain superfamily AYJ59_06835 IPR015963 Uridylate kinase, bacteria AYJ59_06835 IPR011817 Uridylate kinase AYJ59_06835 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_06835 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_06840 IPR036191 RRF superfamily AYJ59_06840 IPR023584 Ribosome recycling factor domain AYJ59_06840 IPR002661 Ribosome recycling factor AYJ59_06845 IPR001441 Decaprenyl diphosphate synthase-like AYJ59_06845 IPR036424 Decaprenyl diphosphate synthase-like superfamily AYJ59_06845 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AYJ59_06850 IPR000374 Phosphatidate cytidylyltransferase AYJ59_06855 IPR008915 Peptidase M50 AYJ59_06855 IPR001478 PDZ domain AYJ59_06855 IPR036034 PDZ superfamily AYJ59_06855 IPR041489 PDZ domain 6 AYJ59_06855 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AYJ59_06860 IPR000184 Bacterial surface antigen (D15) AYJ59_06860 IPR039910 Surface antigen D15-like AYJ59_06860 IPR034746 POTRA domain AYJ59_06860 IPR023707 Outer membrane protein assembly factor BamA AYJ59_06860 IPR010827 POTRA domain, BamA/TamA-like AYJ59_06870 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD AYJ59_06870 IPR011004 Trimeric LpxA-like superfamily AYJ59_06870 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AYJ59_06870 IPR001451 Hexapeptide repeat AYJ59_06875 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AYJ59_06875 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AYJ59_06875 IPR029069 HotDog domain superfamily AYJ59_06880 IPR011004 Trimeric LpxA-like superfamily AYJ59_06880 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AYJ59_06880 IPR001451 Hexapeptide repeat AYJ59_06880 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AYJ59_06880 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AYJ59_06885 IPR003835 Glycosyl transferase, family 19 AYJ59_06890 IPR001352 Ribonuclease HII/HIII AYJ59_06890 IPR022898 Ribonuclease HII AYJ59_06890 IPR036397 Ribonuclease H superfamily AYJ59_06890 IPR012337 Ribonuclease H-like superfamily AYJ59_06890 IPR024567 Ribonuclease HII/HIII domain AYJ59_06895 IPR024181 Chemotaxis response regulator CheV AYJ59_06895 IPR001789 Signal transduction response regulator, receiver domain AYJ59_06895 IPR011006 CheY-like superfamily AYJ59_06895 IPR036061 CheW-like domain superfamily AYJ59_06895 IPR002545 CheW-like domain AYJ59_06900 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AYJ59_06900 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_06900 IPR001650 Helicase, C-terminal AYJ59_06900 IPR010614 DEAD2 AYJ59_06900 IPR006555 ATP-dependent helicase, C-terminal AYJ59_06900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06905 IPR000905 Gcp-like domain AYJ59_06905 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AYJ59_06920 IPR003776 YcaO-like domain AYJ59_06920 IPR041080 YcaO cyclodehydratase, C-terminal AYJ59_06925 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AYJ59_06925 IPR001095 Acetyl-CoA carboxylase, alpha subunit AYJ59_06925 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_06930 IPR012094 tRNA(Ile)-lysidine synthase AYJ59_06930 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AYJ59_06930 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AYJ59_06930 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AYJ59_06930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_06935 IPR017456 CTP synthase, N-terminal AYJ59_06935 IPR033828 CTP synthase GATase domain AYJ59_06935 IPR029062 Class I glutamine amidotransferase-like AYJ59_06935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_06935 IPR004468 CTP synthase AYJ59_06935 IPR017926 Glutamine amidotransferase AYJ59_06940 IPR006218 DAHP synthetase I/KDSA AYJ59_06940 IPR013785 Aldolase-type TIM barrel AYJ59_06940 IPR006269 3-deoxy-8-phosphooctulonate synthase AYJ59_06945 IPR000941 Enolase AYJ59_06945 IPR020811 Enolase, N-terminal AYJ59_06945 IPR020809 Enolase, conserved site AYJ59_06945 IPR020810 Enolase, C-terminal TIM barrel domain AYJ59_06945 IPR036849 Enolase-like, C-terminal domain superfamily AYJ59_06945 IPR029017 Enolase-like, N-terminal AYJ59_06950 IPR023081 Cell division protein FtsB AYJ59_06950 IPR007060 Septum formation initiator FtsL/DivIC AYJ59_06955 IPR002625 Smr domain AYJ59_06955 IPR036063 Smr domain superfamily AYJ59_06955 IPR022990 Uncharacterised protein family UPF0115 AYJ59_06960 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AYJ59_06960 IPR036523 SurE-like phosphatase/nucleotidase superfamily AYJ59_06960 IPR030048 Survival protein SurE AYJ59_06965 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AYJ59_06965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_06970 IPR032816 SNARE associated Golgi protein AYJ59_06975 IPR016047 Peptidase M23 AYJ59_06975 IPR011055 Duplicated hybrid motif AYJ59_06975 IPR018392 LysM domain AYJ59_06975 IPR036779 LysM domain superfamily AYJ59_06980 IPR036748 MTH938-like superfamily AYJ59_06980 IPR007523 NDUFAF3/Mth938 domain-containing protein AYJ59_06985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_06985 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_06985 IPR004839 Aminotransferase, class I/classII AYJ59_06985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_06990 IPR019811 Homoserine dehydrogenase, conserved site AYJ59_06990 IPR036291 NAD(P)-binding domain superfamily AYJ59_06990 IPR002912 ACT domain AYJ59_06990 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AYJ59_06990 IPR001342 Homoserine dehydrogenase, catalytic AYJ59_06990 IPR016204 Homoserine dehydrogenase AYJ59_07000 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ59_07000 IPR004450 Threonine synthase-like AYJ59_07000 IPR037158 Threonine synthase, N-terminal domain superfamily AYJ59_07000 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AYJ59_07000 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ59_07010 IPR029058 Alpha/Beta hydrolase fold AYJ59_07010 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AYJ59_07025 IPR011009 Protein kinase-like domain superfamily AYJ59_07025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07030 IPR037187 DksA, N-terminal domain superfamily AYJ59_07030 IPR000962 Zinc finger, DksA/TraR C4-type AYJ59_07030 IPR012784 RNA polymerase-binding transcription factor DksA AYJ59_07030 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AYJ59_07035 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ59_07035 IPR036412 HAD-like superfamily AYJ59_07035 IPR006439 HAD hydrolase, subfamily IA AYJ59_07035 IPR041492 Haloacid dehalogenase-like hydrolase AYJ59_07035 IPR023214 HAD superfamily AYJ59_07040 IPR018485 Carbohydrate kinase, FGGY, C-terminal AYJ59_07045 IPR007449 ZipA, C-terminal FtsZ-binding domain AYJ59_07045 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily AYJ59_07045 IPR011919 Cell division protein ZipA AYJ59_07050 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AYJ59_07050 IPR013839 NAD-dependent DNA ligase, adenylation AYJ59_07050 IPR010994 RuvA domain 2-like AYJ59_07050 IPR033136 NAD-dependent DNA ligase, conserved site AYJ59_07050 IPR018239 NAD-dependent DNA ligase, active site AYJ59_07050 IPR041663 DisA/LigA, helix-hairpin-helix motif AYJ59_07050 IPR036420 BRCT domain superfamily AYJ59_07050 IPR001357 BRCT domain AYJ59_07050 IPR001679 NAD-dependent DNA ligase AYJ59_07050 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AYJ59_07050 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07050 IPR004150 NAD-dependent DNA ligase, OB-fold AYJ59_07050 IPR013840 NAD-dependent DNA ligase, N-terminal AYJ59_07055 IPR023153 PSPTO4464-like domain superfamily AYJ59_07055 IPR006839 Ribosome-associated, YjgA AYJ59_07060 IPR000620 EamA domain AYJ59_07065 IPR037152 L-asparaginase, N-terminal domain superfamily AYJ59_07065 IPR004550 L-asparaginase, type II AYJ59_07065 IPR006034 Asparaginase/glutaminase-like AYJ59_07065 IPR020827 Asparaginase/glutaminase, active site 1 AYJ59_07065 IPR036152 Asparaginase/glutaminase-like superfamily AYJ59_07065 IPR027473 L-asparaginase, C-terminal AYJ59_07065 IPR040919 Asparaginase/glutaminase, C-terminal AYJ59_07065 IPR027474 L-asparaginase, N-terminal AYJ59_07065 IPR027475 Asparaginase/glutaminase, active site 2 AYJ59_07070 IPR006199 LexA repressor, DNA-binding domain AYJ59_07070 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ59_07070 IPR006197 Peptidase S24, LexA-like AYJ59_07070 IPR036286 LexA/Signal peptidase-like superfamily AYJ59_07070 IPR039418 LexA-like AYJ59_07070 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_07070 IPR006200 Transcription regulator LexA AYJ59_07070 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_07075 IPR005545 YCII-related AYJ59_07075 IPR011008 Dimeric alpha-beta barrel AYJ59_07080 IPR006008 Intracellular septation protein A AYJ59_07085 IPR004013 PHP domain AYJ59_07085 IPR016195 Polymerase/histidinol phosphatase-like AYJ59_07085 IPR003141 Polymerase/histidinol phosphatase, N-terminal AYJ59_07090 IPR006070 YrdC-like domain AYJ59_07090 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AYJ59_07095 IPR008915 Peptidase M50 AYJ59_07100 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AYJ59_07100 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AYJ59_07100 IPR036986 RNA-binding S4 domain superfamily AYJ59_07100 IPR002942 RNA-binding S4 domain AYJ59_07100 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_07100 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_07100 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AYJ59_07120 IPR001972 Stomatin family AYJ59_07120 IPR032435 Band 7, C-terminal extension AYJ59_07120 IPR036013 Band 7/SPFH domain superfamily AYJ59_07120 IPR001107 Band 7 domain AYJ59_07120 IPR018080 Band 7/stomatin-like, conserved site AYJ59_07150 IPR004710 Bile acid:sodium symporter AYJ59_07150 IPR038770 Sodium/solute symporter superfamily AYJ59_07150 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AYJ59_07170 IPR024188 Glutamate synthase large subunit-like protein AYJ59_07170 IPR013785 Aldolase-type TIM barrel AYJ59_07170 IPR027283 Glutamate synthase large subunit-like protein, bacteria AYJ59_07170 IPR002932 Glutamate synthase domain AYJ59_07175 IPR033910 Glutamyl-tRNA synthetase AYJ59_07175 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_07175 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AYJ59_07175 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AYJ59_07175 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AYJ59_07175 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 AYJ59_07175 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AYJ59_07175 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AYJ59_07175 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_07200 IPR006114 6-phosphogluconate dehydrogenase, C-terminal AYJ59_07200 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AYJ59_07200 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AYJ59_07200 IPR006184 6-phosphogluconate-binding site AYJ59_07200 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating AYJ59_07200 IPR036291 NAD(P)-binding domain superfamily AYJ59_07200 IPR006183 6-phosphogluconate dehydrogenase AYJ59_07200 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_07205 IPR036291 NAD(P)-binding domain superfamily AYJ59_07205 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding AYJ59_07205 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal AYJ59_07205 IPR019796 Glucose-6-phosphate dehydrogenase, active site AYJ59_07205 IPR001282 Glucose-6-phosphate dehydrogenase AYJ59_07210 IPR039104 6-Phosphogluconolactonase AYJ59_07210 IPR005900 6-phosphogluconolactonase, DevB-type AYJ59_07210 IPR037171 NagB/RpiA transferase-like AYJ59_07210 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase AYJ59_07215 IPR004095 TGS AYJ59_07215 IPR012676 TGS-like AYJ59_07215 IPR033655 RelA, TGS domain AYJ59_07215 IPR003607 HD/PDEase domain AYJ59_07215 IPR012675 Beta-grasp domain superfamily AYJ59_07215 IPR002912 ACT domain AYJ59_07215 IPR004811 RelA/SpoT family AYJ59_07215 IPR007685 RelA/SpoT AYJ59_07220 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_07220 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AYJ59_07220 IPR003660 HAMP domain AYJ59_07220 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_07220 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_07220 IPR000727 Target SNARE coiled-coil homology domain AYJ59_07220 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_07220 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AYJ59_07220 IPR003660 HAMP domain AYJ59_07220 IPR000727 Target SNARE coiled-coil homology domain AYJ59_07225 IPR018517 tRNA-dihydrouridine synthase, conserved site AYJ59_07225 IPR013785 Aldolase-type TIM barrel AYJ59_07225 IPR004653 tRNA-dihydrouridine(20/20a) synthase AYJ59_07225 IPR035587 DUS-like, FMN-binding domain AYJ59_07225 IPR001269 tRNA-dihydrouridine synthase AYJ59_07230 IPR025824 OB-fold nucleic acid binding domain AYJ59_07230 IPR003753 Exonuclease VII, large subunit AYJ59_07230 IPR020579 Exonuclease VII, large subunit, C-terminal AYJ59_07240 IPR006660 Arsenate reductase-like AYJ59_07240 IPR006659 Arsenate reductase AYJ59_07240 IPR036249 Thioredoxin-like superfamily AYJ59_07250 IPR007046 RNA polymerase sigma factor 54, core-binding domain AYJ59_07250 IPR007634 RNA polymerase sigma factor 54, DNA-binding AYJ59_07250 IPR000394 RNA polymerase sigma factor 54 AYJ59_07250 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AYJ59_07255 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_07255 IPR009875 PilZ domain AYJ59_07255 IPR001173 Glycosyltransferase 2-like AYJ59_07255 IPR003919 Cellulose synthase, subunit A AYJ59_07255 IPR005150 Cellulose synthase AYJ59_07265 IPR003607 HD/PDEase domain AYJ59_07265 IPR011006 CheY-like superfamily AYJ59_07265 IPR037522 HD-GYP domain AYJ59_07265 IPR001789 Signal transduction response regulator, receiver domain AYJ59_07275 IPR013785 Aldolase-type TIM barrel AYJ59_07275 IPR014732 Orotidine 5'-phosphate decarboxylase AYJ59_07275 IPR011060 Ribulose-phosphate binding barrel AYJ59_07275 IPR001754 Orotidine 5'-phosphate decarboxylase domain AYJ59_07275 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AYJ59_07285 IPR005685 Integration host factor, beta subunit AYJ59_07285 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AYJ59_07285 IPR020816 Histone-like DNA-binding protein, conserved site AYJ59_07285 IPR000119 Histone-like DNA-binding protein AYJ59_07290 IPR000110 Ribosomal protein S1 AYJ59_07290 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07290 IPR003029 S1 domain AYJ59_07290 IPR022967 RNA-binding domain, S1 AYJ59_07295 IPR003136 Cytidylate kinase AYJ59_07295 IPR011994 Cytidylate kinase domain AYJ59_07295 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07300 IPR036968 Enolpyruvate transferase domain superfamily AYJ59_07300 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AYJ59_07300 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AYJ59_07300 IPR001986 Enolpyruvate transferase domain AYJ59_07300 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AYJ59_07305 IPR036291 NAD(P)-binding domain superfamily AYJ59_07305 IPR003099 Prephenate dehydrogenase AYJ59_07305 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_07310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_07310 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_07310 IPR005861 Histidinol-phosphate aminotransferase family AYJ59_07310 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AYJ59_07310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_07310 IPR004839 Aminotransferase, class I/classII AYJ59_07315 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain AYJ59_07315 IPR002701 Chorismate mutase II, prokaryotic-type AYJ59_07315 IPR036979 Chorismate mutase domain superfamily AYJ59_07315 IPR036263 Chorismate mutase type II superfamily AYJ59_07315 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AYJ59_07315 IPR002912 ACT domain AYJ59_07315 IPR001086 Prephenate dehydratase AYJ59_07315 IPR018528 Prephenate dehydratase, conserved site AYJ59_07320 IPR000192 Aminotransferase class V domain AYJ59_07320 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_07320 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_07320 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_07320 IPR022278 Phosphoserine aminotransferase AYJ59_07320 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AYJ59_07325 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AYJ59_07325 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AYJ59_07325 IPR005743 DNA gyrase, subunit A AYJ59_07325 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AYJ59_07325 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ59_07325 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AYJ59_07325 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AYJ59_07330 IPR010233 Ubiquinone biosynthesis O-methyltransferase AYJ59_07330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_07335 IPR037512 Phosphoglycolate phosphatase, prokaryotic AYJ59_07335 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AYJ59_07335 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ59_07335 IPR023214 HAD superfamily AYJ59_07335 IPR041492 Haloacid dehalogenase-like hydrolase AYJ59_07335 IPR006439 HAD hydrolase, subfamily IA AYJ59_07335 IPR036412 HAD-like superfamily AYJ59_07340 IPR036291 NAD(P)-binding domain superfamily AYJ59_07340 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_07340 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_07350 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_07350 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AYJ59_07350 IPR036637 Phosphohistidine domain superfamily AYJ59_07350 IPR040442 Pyruvate kinase-like domain superfamily AYJ59_07350 IPR000121 PEP-utilising enzyme, C-terminal AYJ59_07350 IPR023151 PEP-utilising enzyme, conserved site AYJ59_07350 IPR006319 Phosphoenolpyruvate synthase AYJ59_07350 IPR008279 PEP-utilising enzyme, mobile domain AYJ59_07350 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_07350 IPR018274 PEP-utilising enzyme, active site AYJ59_07355 IPR003593 AAA+ ATPase domain AYJ59_07355 IPR003439 ABC transporter-like AYJ59_07355 IPR017871 ABC transporter, conserved site AYJ59_07355 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AYJ59_07355 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_07360 IPR035906 MetI-like superfamily AYJ59_07360 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AYJ59_07365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_07365 IPR035906 MetI-like superfamily AYJ59_07370 IPR023765 Solute-binding protein family 5, conserved site AYJ59_07370 IPR039424 Solute-binding protein family 5 AYJ59_07370 IPR030678 Peptide/nickel binding protein, MppA-type AYJ59_07370 IPR000914 Solute-binding protein family 5 domain AYJ59_07375 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AYJ59_07375 IPR036291 NAD(P)-binding domain superfamily AYJ59_07375 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_07400 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AYJ59_07400 IPR020816 Histone-like DNA-binding protein, conserved site AYJ59_07400 IPR000119 Histone-like DNA-binding protein AYJ59_07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_07405 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_07405 IPR015947 PUA-like superfamily AYJ59_07405 IPR008268 Peptidase S16, active site AYJ59_07405 IPR003111 Lon, substrate-binding domain AYJ59_07405 IPR004815 Lon protease, bacterial/eukaryotic-type AYJ59_07405 IPR008269 Peptidase S16, Lon proteolytic domain AYJ59_07405 IPR027543 Lon protease, bacterial AYJ59_07405 IPR003959 ATPase, AAA-type, core AYJ59_07405 IPR003593 AAA+ ATPase domain AYJ59_07405 IPR027065 Lon protease AYJ59_07410 IPR019489 Clp ATPase, C-terminal AYJ59_07410 IPR010603 Zinc finger, ClpX C4-type AYJ59_07410 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07410 IPR004487 Clp protease, ATP-binding subunit ClpX AYJ59_07410 IPR003593 AAA+ ATPase domain AYJ59_07410 IPR038366 Zinc finger, ClpX C4-type superfamily AYJ59_07410 IPR003959 ATPase, AAA-type, core AYJ59_07415 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AYJ59_07415 IPR033135 ClpP, histidine active site AYJ59_07415 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_07415 IPR001907 ATP-dependent Clp protease proteolytic subunit AYJ59_07415 IPR018215 ClpP, Ser active site AYJ59_07420 IPR027304 Trigger factor/SurA domain superfamily AYJ59_07420 IPR036611 Trigger factor ribosome-binding domain superfamily AYJ59_07420 IPR008881 Trigger factor, ribosome-binding, bacterial AYJ59_07420 IPR037041 Trigger factor, C-terminal domain superfamily AYJ59_07420 IPR008880 Trigger factor, C-terminal AYJ59_07420 IPR005215 Trigger factor AYJ59_07420 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_07430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07430 IPR003593 AAA+ ATPase domain AYJ59_07430 IPR032781 ABC-transporter extension domain AYJ59_07430 IPR003439 ABC transporter-like AYJ59_07430 IPR017871 ABC transporter, conserved site AYJ59_07435 IPR015854 ABC transporter, lipoprotein release, LolD AYJ59_07435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07435 IPR011924 Lipoprotein releasing system, ATP-binding protein AYJ59_07435 IPR017871 ABC transporter, conserved site AYJ59_07435 IPR003439 ABC transporter-like AYJ59_07435 IPR003593 AAA+ ATPase domain AYJ59_07440 IPR025857 MacB-like periplasmic core domain AYJ59_07440 IPR003838 ABC transporter permease protein domain AYJ59_07440 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E AYJ59_07445 IPR005115 Uncharacterised domain UPF0126 AYJ59_07450 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_07450 IPR023753 FAD/NAD(P)-binding domain AYJ59_07460 IPR003711 CarD-like/TRCF domain AYJ59_07460 IPR001650 Helicase, C-terminal AYJ59_07460 IPR036101 CarD-like/TRCF domain superfamily AYJ59_07460 IPR011545 DEAD/DEAH box helicase domain AYJ59_07460 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_07460 IPR004576 Transcription-repair coupling factor AYJ59_07460 IPR005118 Transcription-repair-coupling factor, C-terminal domain AYJ59_07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07460 IPR041471 UvrB, interaction domain AYJ59_07460 IPR037235 TRCF-like, C-terminal domain AYJ59_07470 IPR023845 Domain of unknown function DUF3817, transmembrane AYJ59_07475 IPR036707 Cell division topological specificity factor MinE superfamily AYJ59_07475 IPR005527 Cell division topological specificity factor MinE AYJ59_07480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07480 IPR025501 ATP binding protein MinD AYJ59_07480 IPR010223 ATP binding protein MinD, bacterial-type AYJ59_07480 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AYJ59_07485 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily AYJ59_07485 IPR005526 Septum formation inhibitor MinC, C-terminal AYJ59_07485 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal AYJ59_07485 IPR013033 Septum formation inhibitor MinC AYJ59_07485 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily AYJ59_07485 IPR007874 Septum formation inhibitor MinC, N-terminal AYJ59_07505 IPR000055 Restriction endonuclease, type I, HsdS AYJ59_07510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_07510 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_07510 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AYJ59_07510 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AYJ59_07510 IPR003356 DNA methylase, adenine-specific AYJ59_07515 IPR029464 Type I restriction enzyme R protein, N-terminal domain AYJ59_07515 IPR001650 Helicase, C-terminal AYJ59_07515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07515 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_07515 IPR006935 Helicase/UvrB, N-terminal AYJ59_07515 IPR013670 EcoEI R protein C-terminal domain AYJ59_07535 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AYJ59_07535 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AYJ59_07535 IPR000462 CDP-alcohol phosphatidyltransferase AYJ59_07540 IPR001162 UvrC family homology region AYJ59_07540 IPR004791 UvrABC system, subunit C AYJ59_07540 IPR036876 UVR domain superfamily AYJ59_07540 IPR010994 RuvA domain 2-like AYJ59_07540 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AYJ59_07540 IPR038476 UvrC homology region 2 superfamily AYJ59_07540 IPR001943 UVR domain AYJ59_07540 IPR000305 GIY-YIG endonuclease AYJ59_07540 IPR041663 DisA/LigA, helix-hairpin-helix motif AYJ59_07540 IPR035901 GIY-YIG endonuclease superfamily AYJ59_07545 IPR002142 Peptidase S49 AYJ59_07545 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_07545 IPR004635 Peptidase S49, SppA AYJ59_07550 IPR001789 Signal transduction response regulator, receiver domain AYJ59_07550 IPR029787 Nucleotide cyclase AYJ59_07550 IPR000160 GGDEF domain AYJ59_07550 IPR011006 CheY-like superfamily AYJ59_07555 IPR018136 Aconitase family, 4Fe-4S cluster binding site AYJ59_07555 IPR036008 Aconitase, iron-sulfur domain AYJ59_07555 IPR004406 Aconitase B AYJ59_07555 IPR036288 Aconitase B, HEAT-like domain superfamily AYJ59_07555 IPR015933 Aconitase B, HEAT-like domain AYJ59_07555 IPR015932 Aconitase, domain 2 AYJ59_07555 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AYJ59_07555 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AYJ59_07555 IPR015929 Aconitase B, swivel AYJ59_07555 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AYJ59_07580 IPR001185 Large-conductance mechanosensitive channel AYJ59_07580 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AYJ59_07580 IPR036019 Gated mechanosensitive channel AYJ59_07580 IPR019823 Large-conductance mechanosensitive channel, conserved site AYJ59_07590 IPR025669 AAA domain AYJ59_07590 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07605 IPR003607 HD/PDEase domain AYJ59_07605 IPR037522 HD-GYP domain AYJ59_07620 IPR001460 Penicillin-binding protein, transpeptidase AYJ59_07620 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_07620 IPR002137 Beta-lactamase, class-D active site AYJ59_07625 IPR029062 Class I glutamine amidotransferase-like AYJ59_07625 IPR002818 DJ-1/PfpI AYJ59_07630 IPR013154 Alcohol dehydrogenase, N-terminal AYJ59_07630 IPR014183 Alcohol dehydrogenase class III AYJ59_07630 IPR013149 Alcohol dehydrogenase, C-terminal AYJ59_07630 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AYJ59_07630 IPR011032 GroES-like superfamily AYJ59_07630 IPR036291 NAD(P)-binding domain superfamily AYJ59_07630 IPR020843 Polyketide synthase, enoylreductase domain AYJ59_07635 IPR029058 Alpha/Beta hydrolase fold AYJ59_07635 IPR014186 S-formylglutathione hydrolase AYJ59_07635 IPR000801 Putative esterase AYJ59_07640 IPR015414 Transmembrane protein TMEM64 AYJ59_07640 IPR032816 SNARE associated Golgi protein AYJ59_07655 IPR023380 DsbB-like superfamily AYJ59_07655 IPR003752 Disulphide bond formation protein DsbB/BdbC AYJ59_07655 IPR022920 Disulphide bond formation protein DsbB AYJ59_07680 IPR024083 Fumarase/histidase, N-terminal AYJ59_07680 IPR020557 Fumarate lyase, conserved site AYJ59_07680 IPR000362 Fumarate lyase family AYJ59_07680 IPR013539 Adenylosuccinate lyase PurB, C-terminal AYJ59_07680 IPR008948 L-Aspartase-like AYJ59_07680 IPR004769 Adenylosuccinate lyase AYJ59_07680 IPR022761 Fumarate lyase, N-terminal AYJ59_07685 IPR039994 JmjC domain-containing AYJ59_07685 IPR003347 JmjC domain AYJ59_07690 IPR000620 EamA domain AYJ59_07700 IPR007863 Peptidase M16, C-terminal AYJ59_07700 IPR011765 Peptidase M16, N-terminal AYJ59_07700 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AYJ59_07700 IPR013578 Peptidase M16C associated AYJ59_07705 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AYJ59_07705 IPR012162 Polyribonucleotide nucleotidyltransferase AYJ59_07705 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_07705 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07705 IPR001247 Exoribonuclease, phosphorolytic domain 1 AYJ59_07705 IPR036612 K Homology domain, type 1 superfamily AYJ59_07705 IPR004088 K Homology domain, type 1 AYJ59_07705 IPR027408 PNPase/RNase PH domain superfamily AYJ59_07705 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AYJ59_07705 IPR022967 RNA-binding domain, S1 AYJ59_07705 IPR003029 S1 domain AYJ59_07705 IPR004087 K Homology domain AYJ59_07705 IPR036345 Exoribonuclease, PH domain 2 superfamily AYJ59_07705 IPR015847 Exoribonuclease, phosphorolytic domain 2 AYJ59_07710 IPR009068 S15/NS1, RNA-binding AYJ59_07710 IPR005290 Ribosomal protein S15, bacterial-type AYJ59_07710 IPR000589 Ribosomal protein S15 AYJ59_07720 IPR010233 Ubiquinone biosynthesis O-methyltransferase AYJ59_07720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_07725 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_07725 IPR002501 Pseudouridine synthase II, N-terminal AYJ59_07725 IPR032819 tRNA pseudouridylate synthase B, C-terminal AYJ59_07725 IPR014780 tRNA pseudouridine synthase II, TruB AYJ59_07725 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AYJ59_07730 IPR015946 K homology domain-like, alpha/beta AYJ59_07730 IPR000238 Ribosome-binding factor A AYJ59_07730 IPR020053 Ribosome-binding factor A, conserved site AYJ59_07730 IPR023799 Ribosome-binding factor A domain superfamily AYJ59_07735 IPR000795 Transcription factor, GTP-binding domain AYJ59_07735 IPR000178 Translation initiation factor aIF-2, bacterial-like AYJ59_07735 IPR015760 Translation initiation factor IF- 2 AYJ59_07735 IPR023115 Translation initiation factor IF- 2, domain 3 AYJ59_07735 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AYJ59_07735 IPR005225 Small GTP-binding protein domain AYJ59_07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07735 IPR006847 Translation initiation factor IF-2, N-terminal AYJ59_07735 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_07735 IPR013575 Initiation factor 2 associated domain, bacterial AYJ59_07735 IPR009061 Putative DNA-binding domain superfamily AYJ59_07740 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AYJ59_07740 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07740 IPR004087 K Homology domain AYJ59_07740 IPR015946 K homology domain-like, alpha/beta AYJ59_07740 IPR010213 Transcription termination factor NusA AYJ59_07740 IPR010214 Transcription termination factor NusA, C-terminal duplication AYJ59_07740 IPR009019 K homology domain superfamily, prokaryotic type AYJ59_07740 IPR013735 Transcription factor NusA, N-terminal AYJ59_07740 IPR030842 Transcription termination/antitermination protein NusA, bacterial AYJ59_07740 IPR036555 NusA, N-terminal domain superfamily AYJ59_07740 IPR022967 RNA-binding domain, S1 AYJ59_07740 IPR003029 S1 domain AYJ59_07740 IPR025249 KH domain, NusA-like AYJ59_07745 IPR003728 Ribosome maturation factor RimP AYJ59_07745 IPR028998 Ribosome maturation factor RimP, C-terminal AYJ59_07745 IPR028989 Ribosome maturation factor RimP, N-terminal AYJ59_07745 IPR035956 RimP, N-terminal domain superfamily AYJ59_07745 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AYJ59_07760 IPR038377 Sodium/glucose symporter superfamily AYJ59_07760 IPR014083 Cation/acetate symporter ActP AYJ59_07760 IPR018212 Sodium/solute symporter, conserved site AYJ59_07760 IPR001734 Sodium/solute symporter AYJ59_07765 IPR007436 Protein of unknown function DUF485 AYJ59_07770 IPR020845 AMP-binding, conserved site AYJ59_07770 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AYJ59_07770 IPR000873 AMP-dependent synthetase/ligase AYJ59_07770 IPR042099 AMP-dependent synthetase-like superfamily AYJ59_07770 IPR025110 AMP-binding enzyme, C-terminal domain AYJ59_07770 IPR011904 Acetate-CoA ligase AYJ59_07775 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AYJ59_07775 IPR040982 DNA polymerase III alpha subunit finger domain AYJ59_07775 IPR029460 DNA polymerase, helix-hairpin-helix motif AYJ59_07775 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AYJ59_07775 IPR004013 PHP domain AYJ59_07775 IPR003141 Polymerase/histidinol phosphatase, N-terminal AYJ59_07775 IPR016195 Polymerase/histidinol phosphatase-like AYJ59_07775 IPR004805 DNA polymerase III, alpha subunit AYJ59_07775 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AYJ59_07780 IPR016181 Acyl-CoA N-acyltransferase AYJ59_07780 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal AYJ59_07780 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AYJ59_07785 IPR004368 Translation initiation factor IF-1 AYJ59_07785 IPR006196 RNA-binding domain, S1, IF1 type AYJ59_07785 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07785 IPR022967 RNA-binding domain, S1 AYJ59_07790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07790 IPR003593 AAA+ ATPase domain AYJ59_07790 IPR003959 ATPase, AAA-type, core AYJ59_07790 IPR019489 Clp ATPase, C-terminal AYJ59_07790 IPR041546 ClpA/ClpB, AAA lid domain AYJ59_07790 IPR004176 Clp, N-terminal AYJ59_07790 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AYJ59_07790 IPR036628 Clp, N-terminal domain superfamily AYJ59_07790 IPR001270 ClpA/B family AYJ59_07790 IPR028299 ClpA/B, conserved site 2 AYJ59_07790 IPR018368 ClpA/B, conserved site 1 AYJ59_07795 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AYJ59_07795 IPR003769 Adaptor protein ClpS, core AYJ59_07795 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ59_07800 IPR008971 HSP40/DnaJ peptide-binding AYJ59_07800 IPR036869 Chaperone J-domain superfamily AYJ59_07800 IPR018253 DnaJ domain, conserved site AYJ59_07800 IPR001623 DnaJ domain AYJ59_07800 IPR002939 Chaperone DnaJ, C-terminal AYJ59_07800 IPR023859 DNA-binding protein, curved-DNA AYJ59_07805 IPR013987 PhnA protein, N-terminal AYJ59_07805 IPR004624 PhnA protein AYJ59_07805 IPR013988 PhnA protein, C-terminal AYJ59_07810 IPR001789 Signal transduction response regulator, receiver domain AYJ59_07810 IPR029787 Nucleotide cyclase AYJ59_07810 IPR011006 CheY-like superfamily AYJ59_07810 IPR000160 GGDEF domain AYJ59_07815 IPR017856 Integrase-like, N-terminal AYJ59_07815 IPR002876 Transcriptional regulator TACO1-like AYJ59_07815 IPR026564 Transcriptional regulator TACO1-like, domain 3 AYJ59_07815 IPR029072 YebC-like AYJ59_07825 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric AYJ59_07830 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_07830 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_07830 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AYJ59_07830 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AYJ59_07830 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AYJ59_07835 IPR023382 Adenine nucleotide alpha hydrolase-like domains AYJ59_07835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_07835 IPR004506 tRNA-specific 2-thiouridylase AYJ59_07840 IPR035932 HflD-like superfamily AYJ59_07840 IPR007451 High frequency lysogenization protein HflD AYJ59_07850 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AYJ59_07850 IPR027304 Trigger factor/SurA domain superfamily AYJ59_07850 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AYJ59_07855 IPR001789 Signal transduction response regulator, receiver domain AYJ59_07855 IPR011006 CheY-like superfamily AYJ59_07860 IPR001114 Adenylosuccinate synthetase AYJ59_07860 IPR018220 Adenylosuccinate synthase, GTP-binding site AYJ59_07860 IPR033128 Adenylosuccinate synthase, active site AYJ59_07860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07860 IPR042111 Adenylosuccinate synthetase, domain 3 AYJ59_07860 IPR042110 Adenylosuccinate synthetase, domain 2 AYJ59_07860 IPR042109 Adenylosuccinate synthetase, domain 1 AYJ59_07865 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AYJ59_07865 IPR004517 ATP phosphoribosyltransferase regulatory subunit AYJ59_07865 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AYJ59_07875 IPR001107 Band 7 domain AYJ59_07875 IPR036013 Band 7/SPFH domain superfamily AYJ59_07875 IPR010200 HflC AYJ59_07880 IPR001972 Stomatin family AYJ59_07880 IPR036013 Band 7/SPFH domain superfamily AYJ59_07880 IPR010201 HflK AYJ59_07880 IPR020980 Menbrane protein HflK, N-terminal AYJ59_07880 IPR001107 Band 7 domain AYJ59_07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07885 IPR032305 GTP-binding protein, middle domain AYJ59_07885 IPR016496 GTPase HflX AYJ59_07885 IPR025121 GTPase HflX, N-terminal AYJ59_07885 IPR042108 GTPase HflX, N-terminal domain superfamily AYJ59_07885 IPR006073 GTP binding domain AYJ59_07885 IPR030394 HflX-type guanine nucleotide-binding (G) domain AYJ59_07885 IPR035647 EF-G domain III/V-like AYJ59_07890 IPR005001 RNA-binding protein Hfq AYJ59_07890 IPR010920 LSM domain superfamily AYJ59_07895 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07895 IPR018022 IPP transferase AYJ59_07895 IPR039657 Dimethylallyltransferase AYJ59_07900 IPR002099 DNA mismatch repair protein family, N-terminal AYJ59_07900 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_07900 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_07900 IPR037198 MutL, C-terminal domain superfamily AYJ59_07900 IPR014762 DNA mismatch repair, conserved site AYJ59_07900 IPR020667 DNA mismatch repair protein, MutL AYJ59_07900 IPR042120 MutL, C-terminal domain, dimerisation subdomain AYJ59_07900 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms AYJ59_07900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_07900 IPR013507 DNA mismatch repair protein, S5 domain 2-like AYJ59_07900 IPR014790 MutL, C-terminal, dimerisation AYJ59_07900 IPR042121 MutL, C-terminal domain, regulatory subdomain AYJ59_07905 IPR021731 AMIN domain AYJ59_07905 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain AYJ59_07905 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_07910 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_07910 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AYJ59_07915 IPR009051 Alpha-helical ferredoxin AYJ59_07915 IPR013542 Domain of unknown function DUF1730 AYJ59_07915 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_07915 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_07915 IPR004453 Epoxyqueuosine reductase QueG AYJ59_07920 IPR001633 EAL domain AYJ59_07920 IPR000160 GGDEF domain AYJ59_07920 IPR005330 MHYT domain AYJ59_07920 IPR035919 EAL domain superfamily AYJ59_07920 IPR029787 Nucleotide cyclase AYJ59_07925 IPR023023 dNTP triphosphohydrolase, type 2 AYJ59_07925 IPR003607 HD/PDEase domain AYJ59_07925 IPR006674 HD domain AYJ59_07925 IPR026875 Phosphohydrolase-associated domain AYJ59_07925 IPR006261 dNTP triphosphohydrolase AYJ59_07945 IPR005744 Hly-III AYJ59_07945 IPR004254 AdipoR/Haemolysin-III-related AYJ59_07950 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AYJ59_07950 IPR033730 Prokaryote proline-tRNA ligase core domain AYJ59_07950 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AYJ59_07950 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AYJ59_07950 IPR002316 Proline-tRNA ligase, class IIa AYJ59_07950 IPR036621 Anticodon-binding domain superfamily AYJ59_07950 IPR004154 Anticodon-binding AYJ59_07950 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_07950 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AYJ59_07950 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AYJ59_07955 IPR001123 Amino acid exporter protein, LeuE-type AYJ59_07960 IPR040423 Phosphoethanolamine transferase AYJ59_07960 IPR017850 Alkaline-phosphatase-like, core domain superfamily AYJ59_07960 IPR000917 Sulfatase, N-terminal AYJ59_07965 IPR000829 DAGK family AYJ59_07965 IPR033718 Diacylglycerol kinase, prokaryotic AYJ59_07965 IPR036945 Diacylglycerol kinase (DAGK) superfamily AYJ59_07970 IPR002577 Helix-turn-helix, HxlR type AYJ59_07970 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_07970 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_07975 IPR033878 Nitroreductase NfsB-like AYJ59_07975 IPR029479 Nitroreductase AYJ59_07975 IPR000415 Nitroreductase-like AYJ59_07980 IPR011129 Cold shock domain AYJ59_07980 IPR019844 Cold-shock (CSD) domain AYJ59_07980 IPR012340 Nucleic acid-binding, OB-fold AYJ59_07980 IPR002059 Cold-shock protein, DNA-binding AYJ59_07980 IPR012156 Cold shock, CspA AYJ59_08000 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08000 IPR016478 GTPase, MTG1 AYJ59_08000 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AYJ59_08000 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AYJ59_08000 IPR006073 GTP binding domain AYJ59_08000 IPR019991 GTP-binding protein, ribosome biogenesis AYJ59_08005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_08005 IPR007473 Ribosomal RNA large subunit methyltransferase J AYJ59_08005 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_08025 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AYJ59_08025 IPR023555 Thiol-disulphide oxidoreductase ResA AYJ59_08025 IPR036249 Thioredoxin-like superfamily AYJ59_08025 IPR017937 Thioredoxin, conserved site AYJ59_08025 IPR013766 Thioredoxin domain AYJ59_08030 IPR020591 Chromosomal replication control, initiator DnaA-like AYJ59_08030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08030 IPR013317 Chromosomal replication initiator protein DnaA AYJ59_08030 IPR017788 DnaA regulatory inactivator Hda AYJ59_08030 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AYJ59_08040 IPR010918 PurM-like, C-terminal domain AYJ59_08040 IPR036921 PurM-like, N-terminal domain superfamily AYJ59_08040 IPR016188 PurM-like, N-terminal domain AYJ59_08040 IPR036676 PurM-like, C-terminal domain superfamily AYJ59_08040 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AYJ59_08045 IPR036477 Formyl transferase, N-terminal domain superfamily AYJ59_08045 IPR002376 Formyl transferase, N-terminal AYJ59_08045 IPR004607 Phosphoribosylglycinamide formyltransferase AYJ59_08045 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AYJ59_08055 IPR036157 dUTPase-like superfamily AYJ59_08055 IPR033704 dUTPase, trimeric AYJ59_08055 IPR029054 dUTPase-like AYJ59_08055 IPR011962 dCTP deaminase AYJ59_08060 IPR034904 Fe-S cluster assembly domain superfamily AYJ59_08060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08060 IPR000808 Mrp, conserved site AYJ59_08060 IPR019591 Mrp/NBP35 ATP-binding protein AYJ59_08060 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AYJ59_08065 IPR013655 PAS fold-3 AYJ59_08065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_08065 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_08065 IPR013767 PAS fold AYJ59_08065 IPR001610 PAC motif AYJ59_08065 IPR035965 PAS domain superfamily AYJ59_08065 IPR005467 Histidine kinase domain AYJ59_08065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_08065 IPR000014 PAS domain AYJ59_08065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_08065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_08070 IPR001789 Signal transduction response regulator, receiver domain AYJ59_08070 IPR011006 CheY-like superfamily AYJ59_08075 IPR011006 CheY-like superfamily AYJ59_08075 IPR005467 Histidine kinase domain AYJ59_08075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_08075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_08075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_08075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_08075 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_08075 IPR001789 Signal transduction response regulator, receiver domain AYJ59_08080 IPR002645 STAS domain AYJ59_08080 IPR036513 STAS domain superfamily AYJ59_08085 IPR029038 Methionyl-tRNA synthetase, Zn-domain AYJ59_08085 IPR015413 Methionyl/Leucyl tRNA synthetase AYJ59_08085 IPR014758 Methionyl-tRNA synthetase AYJ59_08085 IPR023458 Methionine-tRNA ligase, type 1 AYJ59_08085 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AYJ59_08085 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_08085 IPR002547 tRNA-binding domain AYJ59_08085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_08085 IPR012340 Nucleic acid-binding, OB-fold AYJ59_08085 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AYJ59_08085 IPR033911 Methioninyl-tRNA synthetase core domain AYJ59_08085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_08090 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA AYJ59_08090 IPR003667 NqrDE/RnfAE AYJ59_08095 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria AYJ59_08095 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB AYJ59_08095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_08095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_08095 IPR007202 4Fe-4S domain AYJ59_08105 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D AYJ59_08105 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD AYJ59_08110 IPR007329 FMN-binding AYJ59_08110 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG AYJ59_08115 IPR003667 NqrDE/RnfAE AYJ59_08115 IPR010968 Ion-translocating oxidoreductase complex subunit E AYJ59_08120 IPR004035 Endonuclease III, iron-sulphur binding site AYJ59_08120 IPR011257 DNA glycosylase AYJ59_08120 IPR005759 Endonuclease III AYJ59_08120 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AYJ59_08120 IPR000445 Helix-hairpin-helix motif AYJ59_08120 IPR004036 Endonuclease III-like, conserved site-2 AYJ59_08120 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AYJ59_08120 IPR003265 HhH-GPD domain AYJ59_08150 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AYJ59_08150 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AYJ59_08150 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_08180 IPR033878 Nitroreductase NfsB-like AYJ59_08180 IPR029479 Nitroreductase AYJ59_08180 IPR000415 Nitroreductase-like AYJ59_08200 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AYJ59_08200 IPR013785 Aldolase-type TIM barrel AYJ59_08210 IPR024530 Putative quorum-sensing-regulated virulence factor AYJ59_08220 IPR006258 Dihydrolipoamide dehydrogenase AYJ59_08220 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AYJ59_08220 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AYJ59_08220 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AYJ59_08220 IPR023753 FAD/NAD(P)-binding domain AYJ59_08220 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_08220 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ59_08225 IPR004167 Peripheral subunit-binding domain AYJ59_08225 IPR011053 Single hybrid motif AYJ59_08225 IPR036625 E3-binding domain superfamily AYJ59_08225 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AYJ59_08225 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AYJ59_08225 IPR000089 Biotin/lipoyl attachment AYJ59_08225 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AYJ59_08225 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AYJ59_08230 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AYJ59_08230 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AYJ59_08230 IPR005474 Transketolase, N-terminal AYJ59_08230 IPR029061 Thiamin diphosphate-binding fold AYJ59_08230 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AYJ59_08230 IPR004660 Pyruvate dehydrogenase E1 component AYJ59_08235 IPR022927 RNA pyrophosphohydrolase RppH AYJ59_08235 IPR000086 NUDIX hydrolase domain AYJ59_08235 IPR020084 NUDIX hydrolase, conserved site AYJ59_08235 IPR015797 NUDIX hydrolase-like domain superfamily AYJ59_08235 IPR020476 NUDIX hydrolase AYJ59_08240 IPR036412 HAD-like superfamily AYJ59_08240 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AYJ59_08240 IPR023214 HAD superfamily AYJ59_08245 IPR005330 MHYT domain AYJ59_08245 IPR029787 Nucleotide cyclase AYJ59_08245 IPR001633 EAL domain AYJ59_08245 IPR035919 EAL domain superfamily AYJ59_08245 IPR000160 GGDEF domain AYJ59_08250 IPR004780 Signal recognition particle protein AYJ59_08250 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AYJ59_08250 IPR003593 AAA+ ATPase domain AYJ59_08250 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08250 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AYJ59_08250 IPR022941 Signal recognition particle, SRP54 subunit AYJ59_08250 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AYJ59_08250 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AYJ59_08250 IPR013822 Signal recognition particle SRP54, helical bundle AYJ59_08255 IPR017562 Cytochrome c-type biogenesis protein CcsA AYJ59_08255 IPR002541 Cytochrome c assembly protein AYJ59_08260 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ59_08260 IPR000644 CBS domain AYJ59_08260 IPR002550 CNNM, transmembrane domain AYJ59_08260 IPR036318 FAD-binding, type PCMH-like superfamily AYJ59_08260 IPR005170 Transporter-associated domain AYJ59_08265 IPR020550 Inositol monophosphatase, conserved site AYJ59_08265 IPR000760 Inositol monophosphatase-like AYJ59_08265 IPR022337 Inositol monophosphatase, SuhB AYJ59_08265 IPR020583 Inositol monophosphatase, metal-binding site AYJ59_08265 IPR033942 Inositol monophosphatase AYJ59_08270 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_08270 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB AYJ59_08270 IPR001789 Signal transduction response regulator, receiver domain AYJ59_08270 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_08270 IPR013767 PAS fold AYJ59_08270 IPR035965 PAS domain superfamily AYJ59_08270 IPR000700 PAS-associated, C-terminal AYJ59_08270 IPR036641 HPT domain superfamily AYJ59_08270 IPR005467 Histidine kinase domain AYJ59_08270 IPR040642 Histidine kinase receptor ArcB, transmembrane domain AYJ59_08270 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_08270 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily AYJ59_08270 IPR011006 CheY-like superfamily AYJ59_08270 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_08270 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_08270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_08270 IPR000014 PAS domain AYJ59_08275 IPR003593 AAA+ ATPase domain AYJ59_08275 IPR041166 LapB, rubredoxin metal binding domain AYJ59_08275 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_08275 IPR004504 DNA repair protein RadA AYJ59_08275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08275 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AYJ59_08275 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_08280 IPR002326 Cytochrome c1 AYJ59_08280 IPR036909 Cytochrome c-like domain superfamily AYJ59_08280 IPR009056 Cytochrome c-like domain AYJ59_08285 IPR016174 Di-haem cytochrome, transmembrane AYJ59_08285 IPR030689 Cytochrome b AYJ59_08285 IPR005797 Cytochrome b/b6, N-terminal AYJ59_08285 IPR036150 Cytochrome b/b6, C-terminal domain superfamily AYJ59_08285 IPR005798 Cytochrome b/b6, C-terminal AYJ59_08285 IPR027387 Cytochrome b/b6-like domain superfamily AYJ59_08290 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AYJ59_08290 IPR005805 Rieske iron-sulphur protein, C-terminal AYJ59_08290 IPR014349 Rieske iron-sulphur protein AYJ59_08290 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal AYJ59_08290 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit AYJ59_08290 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AYJ59_08295 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AYJ59_08295 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AYJ59_08300 IPR001692 Histidinol dehydrogenase, conserved site AYJ59_08300 IPR022695 Histidinol dehydrogenase, monofunctional AYJ59_08300 IPR012131 Histidinol dehydrogenase AYJ59_08300 IPR016161 Aldehyde/histidinol dehydrogenase AYJ59_08305 IPR013820 ATP phosphoribosyltransferase, catalytic domain AYJ59_08305 IPR018198 ATP phosphoribosyltransferase, conserved site AYJ59_08305 IPR001348 ATP phosphoribosyltransferase HisG AYJ59_08305 IPR024893 ATP phosphoribosyltransferase HisG, short form AYJ59_08310 IPR036968 Enolpyruvate transferase domain superfamily AYJ59_08310 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AYJ59_08310 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AYJ59_08310 IPR001986 Enolpyruvate transferase domain AYJ59_08320 IPR000412 ABC-2 transporter AYJ59_08320 IPR013525 ABC-2 type transporter AYJ59_08325 IPR003593 AAA+ ATPase domain AYJ59_08325 IPR003439 ABC transporter-like AYJ59_08325 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08325 IPR017871 ABC transporter, conserved site AYJ59_08340 IPR003399 Mce/MlaD AYJ59_08340 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD AYJ59_08345 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AYJ59_08345 IPR030802 ABC transporter permease MalE AYJ59_08350 IPR017871 ABC transporter, conserved site AYJ59_08350 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AYJ59_08350 IPR003439 ABC transporter-like AYJ59_08350 IPR003593 AAA+ ATPase domain AYJ59_08350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08360 IPR004837 Sodium/calcium exchanger membrane region AYJ59_08360 IPR004481 Sodium/potassium/calcium exchanger AYJ59_08365 IPR010023 KdsC family AYJ59_08365 IPR036412 HAD-like superfamily AYJ59_08365 IPR023214 HAD superfamily AYJ59_08375 IPR014340 Lipopolysaccharide export system protein LptA AYJ59_08375 IPR005653 Organic solvent tolerance-like, N-terminal AYJ59_08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08380 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AYJ59_08380 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AYJ59_08380 IPR017871 ABC transporter, conserved site AYJ59_08380 IPR003439 ABC transporter-like AYJ59_08380 IPR003593 AAA+ ATPase domain AYJ59_08385 IPR036567 Ribosome hibernation promotion factor-like AYJ59_08385 IPR003489 Ribosome hibernation promoting factor/RaiA AYJ59_08390 IPR038048 Magnesium transporter MgtE, transmembrane domain AYJ59_08390 IPR038076 MgtE, N-terminal domain superfamily AYJ59_08390 IPR006668 Magnesium transporter, MgtE intracellular domain AYJ59_08390 IPR000644 CBS domain AYJ59_08390 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AYJ59_08390 IPR006669 Magnesium transporter MgtE AYJ59_08390 IPR006667 SLC41 divalent cation transporters, integral membrane domain AYJ59_08395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08395 IPR000795 Transcription factor, GTP-binding domain AYJ59_08395 IPR005225 Small GTP-binding protein domain AYJ59_08395 IPR041732 Peptide chain release factor 3, GTP-binding domain AYJ59_08395 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AYJ59_08395 IPR032090 Peptide chain release factor 3, C-terminal AYJ59_08395 IPR004548 Peptide chain release factor 3 AYJ59_08395 IPR031157 Tr-type G domain, conserved site AYJ59_08395 IPR004161 Translation elongation factor EFTu-like, domain 2 AYJ59_08395 IPR035647 EF-G domain III/V-like AYJ59_08395 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_08400 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_08400 IPR039420 Transcriptional regulatory protein WalR-like AYJ59_08400 IPR001789 Signal transduction response regulator, receiver domain AYJ59_08400 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_08400 IPR001867 OmpR/PhoB-type DNA-binding domain AYJ59_08400 IPR011006 CheY-like superfamily AYJ59_08405 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_08405 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_08405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_08405 IPR003660 HAMP domain AYJ59_08405 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_08405 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_08405 IPR005467 Histidine kinase domain AYJ59_08410 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AYJ59_08410 IPR016174 Di-haem cytochrome, transmembrane AYJ59_08425 IPR032836 DsrE2-like family AYJ59_08425 IPR027396 DsrEFH-like AYJ59_08430 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_08430 IPR010101 TonB-dependent vitamin B12 transporter BtuB AYJ59_08430 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_08430 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_08430 IPR012910 TonB-dependent receptor, plug domain AYJ59_08430 IPR010917 TonB-dependent receptor, conserved site AYJ59_08430 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_08435 IPR004459 Cobyric acid synthase CobQ AYJ59_08435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08435 IPR011698 CobB/CobQ-like glutamine amidotransferase AYJ59_08435 IPR017929 CobB/CobQ glutamine amidotransferase AYJ59_08435 IPR029062 Class I glutamine amidotransferase-like AYJ59_08435 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 AYJ59_08440 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain AYJ59_08440 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08440 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR AYJ59_08445 IPR023544 ABC transporter, vitamin B12-binding protein AYJ59_08445 IPR002491 ABC transporter periplasmic binding domain AYJ59_08455 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_08455 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AYJ59_08455 IPR003329 Acylneuraminate cytidylyltransferase AYJ59_08460 IPR005651 Trm112-like AYJ59_08465 IPR003758 Tetraacyldisaccharide 4'-kinase AYJ59_08465 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08470 IPR004477 ComEC/Rec2-related protein AYJ59_08470 IPR035681 ComA-like, MBL domain AYJ59_08470 IPR001279 Metallo-beta-lactamase AYJ59_08470 IPR004797 Competence protein ComEC/Rec2 AYJ59_08470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ59_08480 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_08480 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_08480 IPR041699 Lon protease, AAA domain AYJ59_08480 IPR027065 Lon protease AYJ59_08480 IPR008269 Peptidase S16, Lon proteolytic domain AYJ59_08485 IPR001905 Ammonium transporter AYJ59_08485 IPR002229 Blood group Rhesus C/E/D polypeptide AYJ59_08485 IPR029020 Ammonium/urea transporter AYJ59_08485 IPR018047 Ammonium transporter, conserved site AYJ59_08485 IPR024041 Ammonium transporter AmtB-like domain AYJ59_08505 IPR001633 EAL domain AYJ59_08505 IPR001294 Phytochrome AYJ59_08505 IPR016132 Phytochrome chromophore attachment domain AYJ59_08505 IPR029787 Nucleotide cyclase AYJ59_08505 IPR000160 GGDEF domain AYJ59_08505 IPR029016 GAF-like domain superfamily AYJ59_08505 IPR003018 GAF domain AYJ59_08505 IPR013515 Phytochrome, central region AYJ59_08505 IPR035919 EAL domain superfamily AYJ59_08515 IPR011709 Domain of unknown function DUF1605 AYJ59_08515 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_08515 IPR024590 RNA helicase HrpA, C-terminal AYJ59_08515 IPR007502 Helicase-associated domain AYJ59_08515 IPR011545 DEAD/DEAH box helicase domain AYJ59_08515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08515 IPR010222 RNA helicase HrpA AYJ59_08515 IPR001650 Helicase, C-terminal AYJ59_08515 IPR003593 AAA+ ATPase domain AYJ59_08525 IPR001387 Cro/C1-type helix-turn-helix domain AYJ59_08525 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AYJ59_08535 IPR000160 GGDEF domain AYJ59_08535 IPR035919 EAL domain superfamily AYJ59_08535 IPR029787 Nucleotide cyclase AYJ59_08535 IPR005330 MHYT domain AYJ59_08535 IPR001633 EAL domain AYJ59_08540 IPR006068 Cation-transporting P-type ATPase, C-terminal AYJ59_08540 IPR023214 HAD superfamily AYJ59_08540 IPR001757 P-type ATPase AYJ59_08540 IPR036412 HAD-like superfamily AYJ59_08540 IPR023299 P-type ATPase, cytoplasmic domain N AYJ59_08540 IPR008250 P-type ATPase, A domain superfamily AYJ59_08540 IPR023298 P-type ATPase, transmembrane domain superfamily AYJ59_08540 IPR018303 P-type ATPase, phosphorylation site AYJ59_08540 IPR004014 Cation-transporting P-type ATPase, N-terminal AYJ59_08545 IPR032435 Band 7, C-terminal extension AYJ59_08545 IPR036013 Band 7/SPFH domain superfamily AYJ59_08545 IPR001107 Band 7 domain AYJ59_08545 IPR001972 Stomatin family AYJ59_08545 IPR018080 Band 7/stomatin-like, conserved site AYJ59_08555 IPR008250 P-type ATPase, A domain superfamily AYJ59_08555 IPR023298 P-type ATPase, transmembrane domain superfamily AYJ59_08555 IPR018303 P-type ATPase, phosphorylation site AYJ59_08555 IPR023299 P-type ATPase, cytoplasmic domain N AYJ59_08555 IPR036412 HAD-like superfamily AYJ59_08555 IPR001757 P-type ATPase AYJ59_08555 IPR027256 P-type ATPase, subfamily IB AYJ59_08555 IPR023214 HAD superfamily AYJ59_08570 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_08570 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase AYJ59_08570 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_08570 IPR036291 NAD(P)-binding domain superfamily AYJ59_08575 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_08575 IPR001036 Acriflavin resistance protein AYJ59_08575 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 AYJ59_08580 IPR006143 RND efflux pump, membrane fusion protein AYJ59_08580 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_08600 IPR003680 Flavodoxin-like fold AYJ59_08600 IPR029039 Flavoprotein-like superfamily AYJ59_08615 IPR023714 Zinc transport protein ZntB AYJ59_08615 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB AYJ59_08655 IPR022924 Cardiolipin synthase AYJ59_08655 IPR001736 Phospholipase D/Transphosphatidylase AYJ59_08655 IPR025202 Phospholipase D-like domain AYJ59_08655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_08655 IPR027379 Cardiolipin synthase N-terminal AYJ59_08655 IPR030874 Cardiolipin synthase, Firmicutes-type AYJ59_08660 IPR014743 Chloride channel, core AYJ59_08660 IPR001807 Chloride channel, voltage gated AYJ59_08660 IPR023861 Chloride channel, ClcA AYJ59_08665 IPR036259 MFS transporter superfamily AYJ59_08665 IPR005828 Major facilitator, sugar transporter-like AYJ59_08665 IPR020846 Major facilitator superfamily domain AYJ59_08680 IPR001279 Metallo-beta-lactamase AYJ59_08680 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ59_08685 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_08690 IPR036397 Ribonuclease H superfamily AYJ59_08690 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AYJ59_08690 IPR006309 DNA polymerase 3, epsilon subunit AYJ59_08690 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ59_08690 IPR012337 Ribonuclease H-like superfamily AYJ59_08700 IPR022892 Ribonuclease HI AYJ59_08700 IPR036397 Ribonuclease H superfamily AYJ59_08700 IPR002156 Ribonuclease H domain AYJ59_08700 IPR012337 Ribonuclease H-like superfamily AYJ59_08710 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AYJ59_08710 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AYJ59_08710 IPR001279 Metallo-beta-lactamase AYJ59_08710 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AYJ59_08710 IPR017782 Hydroxyacylglutathione hydrolase AYJ59_08715 IPR000189 Prokaryotic transglycosylase, active site AYJ59_08715 IPR018392 LysM domain AYJ59_08715 IPR036779 LysM domain superfamily AYJ59_08715 IPR023346 Lysozyme-like domain superfamily AYJ59_08715 IPR008258 Transglycosylase SLT domain 1 AYJ59_08720 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily AYJ59_08720 IPR012289 Lytic transglycosylase, superhelical linker AYJ59_08720 IPR008258 Transglycosylase SLT domain 1 AYJ59_08720 IPR000189 Prokaryotic transglycosylase, active site AYJ59_08720 IPR008939 Lytic transglycosylase, superhelical U-shaped AYJ59_08720 IPR023346 Lysozyme-like domain superfamily AYJ59_08725 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_08725 IPR032678 tRNA synthetases class I, catalytic domain AYJ59_08725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_08725 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AYJ59_08725 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AYJ59_08725 IPR015803 Cysteine-tRNA ligase AYJ59_08730 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AYJ59_08730 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AYJ59_08730 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AYJ59_08730 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AYJ59_08730 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_08730 IPR004514 Glutamine-tRNA synthetase AYJ59_08730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_08730 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AYJ59_08730 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AYJ59_08730 IPR022861 Glutamine-tRNA ligase, bacterial AYJ59_08735 IPR029000 Cyclophilin-like domain superfamily AYJ59_08735 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AYJ59_08735 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AYJ59_08735 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AYJ59_08740 IPR029000 Cyclophilin-like domain superfamily AYJ59_08740 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AYJ59_08740 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AYJ59_08740 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AYJ59_08745 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AYJ59_08745 IPR029052 Metallo-dependent phosphatase-like AYJ59_08745 IPR010138 UDP-2,3-diacylglucosamine hydrolase AYJ59_08755 IPR036458 Sodium:dicarboxylate symporter superfamily AYJ59_08755 IPR018107 Sodium:dicarboxylate symporter, conserved site AYJ59_08755 IPR001991 Sodium:dicarboxylate symporter AYJ59_08755 IPR033380 Glutamate-aspartate symport protein GltP/GltT AYJ59_08755 IPR034703 Proton/glutamate-aspartate symporter GltP AYJ59_08765 IPR026037 Phosphatidylglycerophosphatase A AYJ59_08765 IPR036681 PgpA-like superfamily AYJ59_08765 IPR007686 YutG/PgpA domain AYJ59_08770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_08770 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AYJ59_08770 IPR018223 Argininosuccinate synthase, conserved site AYJ59_08770 IPR001518 Argininosuccinate synthase AYJ59_08770 IPR023434 Argininosuccinate synthase, type 1 subfamily AYJ59_08775 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 AYJ59_08775 IPR033177 Phosphatidylserine decarboxylase AYJ59_08775 IPR003817 Phosphatidylserine decarboxylase-related AYJ59_08780 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ59_08780 IPR002332 Nitrogen regulatory protein P-II, urydylation site AYJ59_08780 IPR011322 Nitrogen regulatory PII-like, alpha/beta AYJ59_08780 IPR002187 Nitrogen regulatory protein PII AYJ59_08780 IPR017918 Nitrogen regulatory protein PII, conserved site AYJ59_08790 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_08790 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_08790 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_08790 IPR001789 Signal transduction response regulator, receiver domain AYJ59_08790 IPR010114 DNA-binding transcriptional regulator NtrC AYJ59_08790 IPR002197 DNA binding HTH domain, Fis-type AYJ59_08790 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_08790 IPR009057 Homeobox-like domain superfamily AYJ59_08790 IPR011006 CheY-like superfamily AYJ59_08790 IPR003593 AAA+ ATPase domain AYJ59_08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_08795 IPR000014 PAS domain AYJ59_08795 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_08795 IPR035965 PAS domain superfamily AYJ59_08795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_08795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_08795 IPR013767 PAS fold AYJ59_08795 IPR005467 Histidine kinase domain AYJ59_08795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_08825 IPR018317 Queuosine biosynthesis protein QueC AYJ59_08825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_08835 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AYJ59_08835 IPR006665 OmpA-like domain AYJ59_08835 IPR039001 Peptidoglycan-associated lipoprotein AYJ59_08835 IPR006664 Outer membrane protein, bacterial AYJ59_08835 IPR006690 Outer membrane protein, OmpA-like, conserved site AYJ59_08835 IPR036737 OmpA-like domain superfamily AYJ59_08840 IPR036752 TolB, N-terminal domain superfamily AYJ59_08840 IPR007195 TolB, N-terminal AYJ59_08840 IPR014167 Tol-Pal system protein TolB AYJ59_08840 IPR011659 WD40-like Beta Propeller AYJ59_08840 IPR011042 Six-bladed beta-propeller, TolB-like AYJ59_08850 IPR014168 Tol-Pal system protein TolR AYJ59_08850 IPR003400 Biopolymer transport protein ExbD/TolR AYJ59_08855 IPR014163 Tol-Pal system, TolQ AYJ59_08855 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_08860 IPR003593 AAA+ ATPase domain AYJ59_08860 IPR008824 RuvB-like P-loop domain AYJ59_08860 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_08860 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_08860 IPR004605 DNA helicase, Holliday junction RuvB-type AYJ59_08860 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_08860 IPR008823 RuvB C-terminal winged helix domain AYJ59_08860 IPR041445 RuvB, AAA lid domain AYJ59_08870 IPR012340 Nucleic acid-binding, OB-fold AYJ59_08870 IPR000085 Bacterial DNA recombination protein RuvA AYJ59_08870 IPR010994 RuvA domain 2-like AYJ59_08870 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AYJ59_08870 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AYJ59_08870 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AYJ59_08870 IPR036267 RuvA, C-terminal domain superfamily AYJ59_08875 IPR002176 Crossover junction endodeoxyribonuclease RuvC AYJ59_08875 IPR012337 Ribonuclease H-like superfamily AYJ59_08875 IPR036397 Ribonuclease H superfamily AYJ59_08880 IPR003473 Quinolinate synthetase A AYJ59_08880 IPR036094 Quinolinate synthetase A superfamily AYJ59_08880 IPR023513 Quinolinate synthase A, type 1 AYJ59_08885 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AYJ59_08885 IPR004524 Aspartate-tRNA ligase, type 1 AYJ59_08885 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AYJ59_08885 IPR004115 GAD-like domain superfamily AYJ59_08885 IPR012340 Nucleic acid-binding, OB-fold AYJ59_08885 IPR029351 GAD domain AYJ59_08885 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_08885 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AYJ59_08895 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_08895 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_08895 IPR036291 NAD(P)-binding domain superfamily AYJ59_08900 IPR002641 Patatin-like phospholipase domain AYJ59_08900 IPR001423 Lysophospholipase patatin, conserved site AYJ59_08900 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ59_08910 IPR000600 ROK family AYJ59_08920 IPR007402 Protein of unknown function DUF455 AYJ59_08920 IPR009078 Ferritin-like superfamily AYJ59_08920 IPR011197 Uncharacterised conserved protein UCP012318 AYJ59_08935 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AYJ59_08935 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AYJ59_08935 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AYJ59_08935 IPR028624 Transcription elongation factor GreA/GreB AYJ59_08935 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AYJ59_08935 IPR006359 Transcription elongation factor GreA AYJ59_08935 IPR023459 Transcription elongation factor GreA/GreB family AYJ59_08935 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AYJ59_08940 IPR011761 ATP-grasp fold AYJ59_08940 IPR006275 Carbamoyl-phosphate synthase, large subunit AYJ59_08940 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AYJ59_08940 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AYJ59_08940 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AYJ59_08940 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AYJ59_08940 IPR011607 Methylglyoxal synthase-like domain AYJ59_08940 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ59_08940 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_08940 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AYJ59_08945 IPR006274 Carbamoyl-phosphate synthase, small subunit AYJ59_08945 IPR029062 Class I glutamine amidotransferase-like AYJ59_08945 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AYJ59_08945 IPR017926 Glutamine amidotransferase AYJ59_08945 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AYJ59_08945 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AYJ59_08955 IPR011701 Major facilitator superfamily AYJ59_08955 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AYJ59_08955 IPR036259 MFS transporter superfamily AYJ59_08955 IPR004734 Multidrug resistance protein AYJ59_08955 IPR020846 Major facilitator superfamily domain AYJ59_08960 IPR033939 Branched-chain aminotransferase AYJ59_08960 IPR001544 Aminotransferase class IV AYJ59_08960 IPR018300 Aminotransferase, class IV, conserved site AYJ59_08960 IPR036038 Aminotransferase-like, PLP-dependent enzymes AYJ59_08960 IPR005785 Branched-chain amino acid aminotransferase I AYJ59_08970 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_08970 IPR000524 Transcription regulator HTH, GntR AYJ59_08970 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_08970 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_08970 IPR004839 Aminotransferase, class I/classII AYJ59_08970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_08970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_08980 IPR000352 Peptide chain release factor class I AYJ59_08985 IPR003660 HAMP domain AYJ59_08985 IPR013655 PAS fold-3 AYJ59_08985 IPR035965 PAS domain superfamily AYJ59_08985 IPR000014 PAS domain AYJ59_08985 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_08985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_08985 IPR001610 PAC motif AYJ59_08985 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_08985 IPR013655 PAS fold-3 AYJ59_08985 IPR035965 PAS domain superfamily AYJ59_08985 IPR000014 PAS domain AYJ59_08985 IPR001610 PAC motif AYJ59_08985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_08985 IPR003660 HAMP domain AYJ59_08995 IPR036291 NAD(P)-binding domain superfamily AYJ59_08995 IPR022664 Dihydrodipicolinate reductase, conserved site AYJ59_08995 IPR022663 Dihydrodipicolinate reductase, C-terminal AYJ59_08995 IPR023940 Dihydrodipicolinate reductase AYJ59_08995 IPR000846 Dihydrodipicolinate reductase, N-terminal AYJ59_09000 IPR012724 Chaperone DnaJ AYJ59_09000 IPR036869 Chaperone J-domain superfamily AYJ59_09000 IPR008971 HSP40/DnaJ peptide-binding AYJ59_09000 IPR018253 DnaJ domain, conserved site AYJ59_09000 IPR001623 DnaJ domain AYJ59_09000 IPR002939 Chaperone DnaJ, C-terminal AYJ59_09000 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AYJ59_09000 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AYJ59_09005 IPR012725 Chaperone DnaK AYJ59_09005 IPR018181 Heat shock protein 70, conserved site AYJ59_09005 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AYJ59_09005 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AYJ59_09005 IPR013126 Heat shock protein 70 family AYJ59_09010 IPR009012 GrpE nucleotide exchange factor, head AYJ59_09010 IPR013805 GrpE nucleotide exchange factor, coiled-coil AYJ59_09010 IPR000740 GrpE nucleotide exchange factor AYJ59_09015 IPR029016 GAF-like domain superfamily AYJ59_09015 IPR002571 Heat-inducible transcription repressor HrcA AYJ59_09015 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal AYJ59_09015 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09015 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_09015 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AYJ59_09020 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AYJ59_09020 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AYJ59_09020 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AYJ59_09020 IPR002504 NAD kinase AYJ59_09025 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09025 IPR003395 RecF/RecN/SMC, N-terminal AYJ59_09025 IPR004604 DNA recombination/repair protein RecN AYJ59_09040 IPR005330 MHYT domain AYJ59_09040 IPR029787 Nucleotide cyclase AYJ59_09040 IPR035919 EAL domain superfamily AYJ59_09040 IPR001633 EAL domain AYJ59_09040 IPR000160 GGDEF domain AYJ59_09045 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AYJ59_09045 IPR001633 EAL domain AYJ59_09045 IPR035919 EAL domain superfamily AYJ59_09045 IPR013976 Metal-dependent hydrolase HDOD AYJ59_09050 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AYJ59_09050 IPR025188 Domain of unknown function DUF4113 AYJ59_09050 IPR017961 DNA polymerase, Y-family, little finger domain AYJ59_09050 IPR001126 UmuC domain AYJ59_09055 IPR039418 LexA-like AYJ59_09055 IPR036286 LexA/Signal peptidase-like superfamily AYJ59_09055 IPR006197 Peptidase S24, LexA-like AYJ59_09055 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ59_09065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_09065 IPR019247 Histidine kinase BarA, N-terminal AYJ59_09065 IPR036641 HPT domain superfamily AYJ59_09065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_09065 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_09065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_09065 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_09065 IPR011006 CheY-like superfamily AYJ59_09065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_09065 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09065 IPR003660 HAMP domain AYJ59_09065 IPR005467 Histidine kinase domain AYJ59_09070 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09070 IPR037522 HD-GYP domain AYJ59_09070 IPR011006 CheY-like superfamily AYJ59_09070 IPR003607 HD/PDEase domain AYJ59_09085 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_09085 IPR000792 Transcription regulator LuxR, C-terminal AYJ59_09085 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09085 IPR001633 EAL domain AYJ59_09085 IPR035919 EAL domain superfamily AYJ59_09095 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AYJ59_09095 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_09100 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal AYJ59_09100 IPR010227 NADH-quinone oxidoreductase, chain M/4 AYJ59_09100 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_09100 IPR003918 NADH:ubiquinone oxidoreductase AYJ59_09105 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AYJ59_09105 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AYJ59_09105 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 AYJ59_09105 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup AYJ59_09110 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AYJ59_09110 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K AYJ59_09115 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 AYJ59_09115 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ AYJ59_09120 IPR010226 NADH-quinone oxidoreductase, chain I AYJ59_09120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_09120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_09125 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site AYJ59_09125 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H AYJ59_09130 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AYJ59_09130 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal AYJ59_09130 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AYJ59_09130 IPR010228 NADH:ubiquinone oxidoreductase, subunit G AYJ59_09130 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site AYJ59_09130 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AYJ59_09130 IPR036010 2Fe-2S ferredoxin-like superfamily AYJ59_09130 IPR006656 Molybdopterin oxidoreductase AYJ59_09135 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AYJ59_09135 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AYJ59_09135 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AYJ59_09135 IPR019554 Soluble ligand binding domain AYJ59_09135 IPR011537 NADH ubiquinone oxidoreductase, F subunit AYJ59_09135 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AYJ59_09135 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AYJ59_09140 IPR002023 NADH-quinone oxidoreductase subunit E-like AYJ59_09140 IPR042128 NuoE domain AYJ59_09140 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal AYJ59_09140 IPR036249 Thioredoxin-like superfamily AYJ59_09145 IPR001135 NADH-quinone oxidoreductase, subunit D AYJ59_09145 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily AYJ59_09145 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site AYJ59_09145 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H AYJ59_09145 IPR029014 [NiFe]-hydrogenase, large subunit AYJ59_09150 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site AYJ59_09150 IPR010218 NADH dehydrogenase, subunit C AYJ59_09150 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily AYJ59_09150 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit AYJ59_09155 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit AYJ59_09155 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit AYJ59_09160 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 AYJ59_09160 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid AYJ59_09160 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily AYJ59_09170 IPR004692 Preprotein translocase SecG subunit AYJ59_09175 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AYJ59_09175 IPR020861 Triosephosphate isomerase, active site AYJ59_09175 IPR000652 Triosephosphate isomerase AYJ59_09175 IPR013785 Aldolase-type TIM barrel AYJ59_09175 IPR035990 Triosephosphate isomerase superfamily AYJ59_09180 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AYJ59_09180 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AYJ59_09180 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AYJ59_09180 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AYJ59_09180 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AYJ59_09180 IPR006352 Phosphoglucosamine mutase, bacterial type AYJ59_09180 IPR016066 Alpha-D-phosphohexomutase, conserved site AYJ59_09180 IPR005841 Alpha-D-phosphohexomutase superfamily AYJ59_09180 IPR005843 Alpha-D-phosphohexomutase, C-terminal AYJ59_09185 IPR011005 Dihydropteroate synthase-like AYJ59_09185 IPR000489 Pterin-binding domain AYJ59_09185 IPR006390 Dihydropteroate synthase AYJ59_09190 IPR003593 AAA+ ATPase domain AYJ59_09190 IPR041569 AAA ATPase, AAA+ lid domain AYJ59_09190 IPR003959 ATPase, AAA-type, core AYJ59_09190 IPR003960 ATPase, AAA-type, conserved site AYJ59_09190 IPR037219 Peptidase M41-like AYJ59_09190 IPR000642 Peptidase M41 AYJ59_09190 IPR011546 Peptidase M41, FtsH extracellular AYJ59_09190 IPR005936 Peptidase, FtsH AYJ59_09190 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09195 IPR015507 Ribosomal RNA large subunit methyltransferase E AYJ59_09195 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AYJ59_09195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_09200 IPR017924 RNA-binding protein YhbY AYJ59_09200 IPR035920 YhbY-like superfamily AYJ59_09200 IPR001890 RNA-binding, CRM domain AYJ59_09205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_09205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_09205 IPR006234 O-succinylhomoserine sulfhydrylase AYJ59_09205 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_09205 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AYJ59_09210 IPR005854 Amidophosphoribosyltransferase AYJ59_09210 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_09210 IPR029057 Phosphoribosyltransferase-like AYJ59_09210 IPR000836 Phosphoribosyltransferase domain AYJ59_09210 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_09210 IPR035584 Amidophosphoribosyltransferase, N-terminal AYJ59_09220 IPR013221 Mur ligase, central AYJ59_09220 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_09220 IPR004101 Mur ligase, C-terminal AYJ59_09220 IPR036565 Mur-like, catalytic domain superfamily AYJ59_09220 IPR018109 Folylpolyglutamate synthetase, conserved site AYJ59_09220 IPR001645 Folylpolyglutamate synthetase AYJ59_09225 IPR041010 Acetyl-coA carboxylase zinc finger domain AYJ59_09225 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AYJ59_09225 IPR034733 Acetyl-CoA carboxylase AYJ59_09225 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AYJ59_09225 IPR029045 ClpP/crotonase-like domain superfamily AYJ59_09230 IPR011060 Ribulose-phosphate binding barrel AYJ59_09230 IPR013785 Aldolase-type TIM barrel AYJ59_09230 IPR018204 Tryptophan synthase, alpha chain, active site AYJ59_09230 IPR002028 Tryptophan synthase, alpha chain AYJ59_09235 IPR001926 Pyridoxal-phosphate dependent enzyme AYJ59_09235 IPR006653 Tryptophan synthase, beta chain, conserved site AYJ59_09235 IPR006654 Tryptophan synthase, beta chain AYJ59_09235 IPR023026 Tryptophan synthase beta chain/beta chain-like AYJ59_09235 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AYJ59_09240 IPR013785 Aldolase-type TIM barrel AYJ59_09240 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AYJ59_09240 IPR011060 Ribulose-phosphate binding barrel AYJ59_09245 IPR020095 Pseudouridine synthase I, TruA, C-terminal AYJ59_09245 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AYJ59_09245 IPR001406 Pseudouridine synthase I, TruA AYJ59_09245 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_09250 IPR036291 NAD(P)-binding domain superfamily AYJ59_09250 IPR012080 Aspartate-semialdehyde dehydrogenase AYJ59_09250 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AYJ59_09250 IPR000534 Semialdehyde dehydrogenase, NAD-binding AYJ59_09250 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type AYJ59_09260 IPR007340 Opacity-associated protein A AYJ59_09260 IPR016047 Peptidase M23 AYJ59_09260 IPR011055 Duplicated hybrid motif AYJ59_09265 IPR004429 Isopropylmalate dehydrogenase AYJ59_09265 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AYJ59_09265 IPR024084 Isopropylmalate dehydrogenase-like domain AYJ59_09270 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AYJ59_09270 IPR033940 3-isopropylmalate dehydratase, swivel domain AYJ59_09270 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AYJ59_09270 IPR004431 3-isopropylmalate dehydratase, small subunit AYJ59_09275 IPR018136 Aconitase family, 4Fe-4S cluster binding site AYJ59_09275 IPR004430 3-isopropylmalate dehydratase, large subunit AYJ59_09275 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AYJ59_09275 IPR036008 Aconitase, iron-sulfur domain AYJ59_09275 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AYJ59_09275 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AYJ59_09280 IPR013785 Aldolase-type TIM barrel AYJ59_09280 IPR024924 7-carboxy-7-deazaguanine synthase-like AYJ59_09280 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type AYJ59_09280 IPR007197 Radical SAM AYJ59_09300 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily AYJ59_09300 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AYJ59_09300 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_09300 IPR006311 Twin-arginine translocation pathway, signal sequence AYJ59_09300 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding AYJ59_09300 IPR023753 FAD/NAD(P)-binding domain AYJ59_09300 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AYJ59_09305 IPR013852 Translation elongation factor P/YeiP, conserved site AYJ59_09305 IPR008991 Translation protein SH3-like domain superfamily AYJ59_09305 IPR013185 Translation elongation factor, KOW-like AYJ59_09305 IPR011897 Translation elongation factor P-like, YeiP AYJ59_09305 IPR001059 Translation elongation factor P/YeiP, central AYJ59_09305 IPR020599 Translation elongation factor P/YeiP AYJ59_09305 IPR015365 Elongation factor P, C-terminal AYJ59_09305 IPR014722 Ribosomal protein L2, domain 2 AYJ59_09305 IPR012340 Nucleic acid-binding, OB-fold AYJ59_09310 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AYJ59_09310 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AYJ59_09325 IPR000160 GGDEF domain AYJ59_09325 IPR033424 Membrane-associated sensor domain AYJ59_09325 IPR029787 Nucleotide cyclase AYJ59_09330 IPR036249 Thioredoxin-like superfamily AYJ59_09330 IPR024706 Peroxiredoxin, AhpC-type AYJ59_09330 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AYJ59_09330 IPR013766 Thioredoxin domain AYJ59_09335 IPR002569 Peptide methionine sulphoxide reductase MsrA AYJ59_09335 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AYJ59_09340 IPR010099 Epimerase family protein SDR39U1 AYJ59_09340 IPR001509 NAD-dependent epimerase/dehydratase AYJ59_09340 IPR036291 NAD(P)-binding domain superfamily AYJ59_09340 IPR013549 Domain of unknown function DUF1731 AYJ59_09345 IPR000847 Transcription regulator HTH, LysR AYJ59_09345 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09345 IPR005119 LysR, substrate-binding AYJ59_09345 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_09350 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AYJ59_09350 IPR016174 Di-haem cytochrome, transmembrane AYJ59_09355 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AYJ59_09355 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AYJ59_09355 IPR023480 Uncharacterised protein family UPF0312/YceI AYJ59_09360 IPR014014 RNA helicase, DEAD-box type, Q motif AYJ59_09360 IPR011545 DEAD/DEAH box helicase domain AYJ59_09360 IPR028622 ATP-dependent RNA helicase RhlE AYJ59_09360 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AYJ59_09360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09360 IPR001650 Helicase, C-terminal AYJ59_09360 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_09365 IPR003660 HAMP domain AYJ59_09365 IPR033480 Single Cache domain 2 AYJ59_09365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_09365 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_09370 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_09370 IPR003660 HAMP domain AYJ59_09370 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_09370 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_09370 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_09370 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_09380 IPR000160 GGDEF domain AYJ59_09380 IPR013656 PAS fold-4 AYJ59_09380 IPR000014 PAS domain AYJ59_09380 IPR001633 EAL domain AYJ59_09380 IPR035919 EAL domain superfamily AYJ59_09380 IPR029787 Nucleotide cyclase AYJ59_09380 IPR035965 PAS domain superfamily AYJ59_09385 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_09385 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_09385 IPR005467 Histidine kinase domain AYJ59_09385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_09385 IPR001610 PAC motif AYJ59_09385 IPR013767 PAS fold AYJ59_09385 IPR035965 PAS domain superfamily AYJ59_09385 IPR000700 PAS-associated, C-terminal AYJ59_09385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_09385 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_09385 IPR000014 PAS domain AYJ59_09390 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09390 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09390 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_09390 IPR000792 Transcription regulator LuxR, C-terminal AYJ59_09390 IPR011006 CheY-like superfamily AYJ59_09400 IPR017911 ABC transporter, macrolide export, ATP-binding domain AYJ59_09400 IPR025857 MacB-like periplasmic core domain AYJ59_09400 IPR003439 ABC transporter-like AYJ59_09400 IPR003593 AAA+ ATPase domain AYJ59_09400 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09400 IPR003838 ABC transporter permease protein domain AYJ59_09400 IPR017871 ABC transporter, conserved site AYJ59_09405 IPR017911 ABC transporter, macrolide export, ATP-binding domain AYJ59_09405 IPR025857 MacB-like periplasmic core domain AYJ59_09405 IPR017871 ABC transporter, conserved site AYJ59_09405 IPR003439 ABC transporter-like AYJ59_09405 IPR003838 ABC transporter permease protein domain AYJ59_09405 IPR003593 AAA+ ATPase domain AYJ59_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09410 IPR005694 Efflux pump membrane protein AYJ59_09410 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_09415 IPR010131 RND efflux system, outer membrane lipoprotein, NodT AYJ59_09415 IPR003423 Outer membrane efflux protein AYJ59_09420 IPR005467 Histidine kinase domain AYJ59_09420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_09420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_09420 IPR003660 HAMP domain AYJ59_09420 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_09420 IPR041610 ArlS, sensor domain AYJ59_09420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_09420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_09425 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_09425 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09425 IPR011006 CheY-like superfamily AYJ59_09425 IPR001867 OmpR/PhoB-type DNA-binding domain AYJ59_09425 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09425 IPR039420 Transcriptional regulatory protein WalR-like AYJ59_09430 IPR036129 Glycerate kinase superfamily AYJ59_09430 IPR018197 Glycerate kinase, restriction-enzyme-like fold AYJ59_09430 IPR004381 Glycerate kinase AYJ59_09430 IPR018193 Glycerate kinase, flavodoxin-like fold AYJ59_09445 IPR025841 Circularly permuted ATP-grasp type 2 AYJ59_09445 IPR016450 Uncharacterised conserved protein UCP005522 AYJ59_09450 IPR013780 Glycosyl hydrolase, all-beta AYJ59_09450 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AYJ59_09450 IPR033746 Glucosylglycerate phosphorylase AYJ59_09450 IPR017853 Glycoside hydrolase superfamily AYJ59_09450 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related AYJ59_09455 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_09460 IPR023214 HAD superfamily AYJ59_09460 IPR006379 HAD-superfamily hydrolase, subfamily IIB AYJ59_09460 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP AYJ59_09460 IPR036412 HAD-like superfamily AYJ59_09470 IPR029787 Nucleotide cyclase AYJ59_09470 IPR001633 EAL domain AYJ59_09470 IPR007895 MASE1 AYJ59_09470 IPR000160 GGDEF domain AYJ59_09470 IPR035919 EAL domain superfamily AYJ59_09495 IPR002317 Serine-tRNA ligase, type1 AYJ59_09495 IPR015866 Serine-tRNA synthetase, type1, N-terminal AYJ59_09495 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AYJ59_09495 IPR033729 Serine-tRNA ligase catalytic core domain AYJ59_09495 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AYJ59_09495 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AYJ59_09495 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_09500 IPR003691 Putative fluoride ion transporter CrcB AYJ59_09505 IPR021886 MgsA AAA+ ATPase C-terminal AYJ59_09505 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09505 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AYJ59_09505 IPR003959 ATPase, AAA-type, core AYJ59_09505 IPR032423 AAA C-terminal domain AYJ59_09505 IPR003593 AAA+ ATPase domain AYJ59_09510 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AYJ59_09510 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AYJ59_09510 IPR029046 Lipoprotein localisation LolA/LolB/LppX AYJ59_09515 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_09515 IPR041027 FtsK alpha domain AYJ59_09515 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09515 IPR025199 DNA translocase FtsK, 4TM region AYJ59_09515 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09515 IPR018541 FtsK gamma domain AYJ59_09515 IPR002543 FtsK domain AYJ59_09520 IPR005982 Thioredoxin reductase AYJ59_09520 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_09520 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AYJ59_09520 IPR023753 FAD/NAD(P)-binding domain AYJ59_09525 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AYJ59_09525 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AYJ59_09525 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AYJ59_09530 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AYJ59_09530 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AYJ59_09530 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria AYJ59_09530 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AYJ59_09540 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_09540 IPR000727 Target SNARE coiled-coil homology domain AYJ59_09540 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_09540 IPR033479 Double Cache domain 1 AYJ59_09540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_09540 IPR003660 HAMP domain AYJ59_09545 IPR035909 Methylesterase CheB, C-terminal AYJ59_09545 IPR011006 CheY-like superfamily AYJ59_09545 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AYJ59_09545 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09545 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AYJ59_09550 IPR000780 MCP methyltransferase, CheR-type AYJ59_09550 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AYJ59_09550 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AYJ59_09550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_09550 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AYJ59_09550 IPR026024 Chemotaxis protein methyltransferase CheR AYJ59_09560 IPR002545 CheW-like domain AYJ59_09560 IPR036061 CheW-like domain superfamily AYJ59_09560 IPR039315 Chemotaxis protein CheW AYJ59_09565 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09565 IPR011006 CheY-like superfamily AYJ59_09580 IPR036061 CheW-like domain superfamily AYJ59_09580 IPR002545 CheW-like domain AYJ59_09580 IPR039315 Chemotaxis protein CheW AYJ59_09585 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily AYJ59_09585 IPR004105 Histidine kinase CheA-like, homodimeric domain AYJ59_09585 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AYJ59_09585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_09585 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_09585 IPR036641 HPT domain superfamily AYJ59_09585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_09585 IPR005467 Histidine kinase domain AYJ59_09585 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_09585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_09585 IPR035891 CheY-binding domain of CheA AYJ59_09585 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding AYJ59_09585 IPR036061 CheW-like domain superfamily AYJ59_09585 IPR002545 CheW-like domain AYJ59_09590 IPR007439 Chemotaxis phosphatase, CheZ AYJ59_09595 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09595 IPR011006 CheY-like superfamily AYJ59_09600 IPR028617 RNA polymerase sigma factor FliA AYJ59_09600 IPR007630 RNA polymerase sigma-70 region 4 AYJ59_09600 IPR012845 RNA polymerase sigma factor, FliA/WhiG AYJ59_09600 IPR013325 RNA polymerase sigma factor, region 2 AYJ59_09600 IPR007627 RNA polymerase sigma-70 region 2 AYJ59_09600 IPR007624 RNA polymerase sigma-70 region 3 AYJ59_09600 IPR014284 RNA polymerase sigma-70 like domain AYJ59_09600 IPR000943 RNA polymerase sigma-70 AYJ59_09600 IPR013324 RNA polymerase sigma factor, region 3/4-like AYJ59_09605 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AYJ59_09605 IPR025501 ATP binding protein MinD AYJ59_09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09610 IPR003593 AAA+ ATPase domain AYJ59_09610 IPR020006 Flagellar biosynthesis protein FlhF AYJ59_09610 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09610 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AYJ59_09615 IPR001712 Type III secretion system FHIPEP AYJ59_09615 IPR042193 FHIPEP, domain 3 AYJ59_09615 IPR025505 FHIPEP conserved site AYJ59_09615 IPR006301 Flagellar biosynthesis protein FlhA AYJ59_09615 IPR042196 FHIPEP, domain 4 AYJ59_09615 IPR042194 FHIPEP, domain 1 AYJ59_09620 IPR029025 Type III secretion system substrate exporter, C-terminal AYJ59_09620 IPR006136 Flagellar biosynthetic protein FlhB AYJ59_09620 IPR006135 Type III secretion system substrate exporter AYJ59_09625 IPR002010 Type III secretion system inner membrane R protein AYJ59_09625 IPR006303 Flagellar biosynthesis protein FliR AYJ59_09630 IPR006305 Flagellar biosynthesis protein FliQ AYJ59_09630 IPR002191 Bacterial export protein family 3 AYJ59_09635 IPR005838 Type III secretion system inner membrane P protein AYJ59_09635 IPR005837 Flagellar transport protein FliP AYJ59_09640 IPR022781 Flagellar biosynthesis protein, FliO AYJ59_09645 IPR008278 4'-phosphopantetheinyl transferase domain AYJ59_09645 IPR002582 Holo-[acyl carrier protein] synthase AYJ59_09645 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AYJ59_09645 IPR004568 Phosphopantetheine-protein transferase domain AYJ59_09650 IPR013785 Aldolase-type TIM barrel AYJ59_09650 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AYJ59_09650 IPR036130 Pyridoxine 5'-phosphate synthase AYJ59_09655 IPR012340 Nucleic acid-binding, OB-fold AYJ59_09655 IPR003717 Recombination protein O, RecO AYJ59_09655 IPR037278 ARFGAP/RecO-like zinc finger AYJ59_09655 IPR022572 DNA replication/recombination mediator RecO, N-terminal AYJ59_09660 IPR030388 Era-type guanine nucleotide-binding (G) domain AYJ59_09660 IPR005662 GTP-binding protein Era AYJ59_09660 IPR006073 GTP binding domain AYJ59_09660 IPR015946 K homology domain-like, alpha/beta AYJ59_09660 IPR004044 K Homology domain, type 2 AYJ59_09660 IPR009019 K homology domain superfamily, prokaryotic type AYJ59_09660 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09660 IPR005225 Small GTP-binding protein domain AYJ59_09665 IPR000999 Ribonuclease III domain AYJ59_09665 IPR011907 Ribonuclease III AYJ59_09665 IPR014720 Double-stranded RNA-binding domain AYJ59_09665 IPR036389 Ribonuclease III, endonuclease domain superfamily AYJ59_09670 IPR019533 Peptidase S26 AYJ59_09670 IPR019756 Peptidase S26A, signal peptidase I, serine active site AYJ59_09670 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AYJ59_09670 IPR019758 Peptidase S26A, signal peptidase I, conserved site AYJ59_09670 IPR000223 Peptidase S26A, signal peptidase I AYJ59_09670 IPR036286 LexA/Signal peptidase-like superfamily AYJ59_09675 IPR013842 GTP-binding protein LepA, C-terminal AYJ59_09675 IPR038363 LepA, C-terminal domain superfamily AYJ59_09675 IPR031157 Tr-type G domain, conserved site AYJ59_09675 IPR004161 Translation elongation factor EFTu-like, domain 2 AYJ59_09675 IPR000640 Elongation factor EFG, domain V-like AYJ59_09675 IPR035647 EF-G domain III/V-like AYJ59_09675 IPR006297 Elongation factor 4 AYJ59_09675 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09675 IPR005225 Small GTP-binding protein domain AYJ59_09675 IPR000795 Transcription factor, GTP-binding domain AYJ59_09675 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_09675 IPR035654 Elongation factor 4, domain IV AYJ59_09680 IPR001940 Peptidase S1C AYJ59_09680 IPR001478 PDZ domain AYJ59_09680 IPR036034 PDZ superfamily AYJ59_09680 IPR011782 Peptidase S1C, Do AYJ59_09680 IPR009003 Peptidase S1, PA clan AYJ59_09690 IPR005288 L-aspartate oxidase AYJ59_09690 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AYJ59_09690 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AYJ59_09690 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AYJ59_09690 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AYJ59_09690 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_09695 IPR036061 CheW-like domain superfamily AYJ59_09695 IPR039315 Chemotaxis protein CheW AYJ59_09695 IPR002545 CheW-like domain AYJ59_09700 IPR006222 Aminomethyltransferase, folate-binding domain AYJ59_09700 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AYJ59_09700 IPR023758 tRNA-modifying protein YgfZ AYJ59_09700 IPR017703 YgfZ/GcvT conserved site AYJ59_09705 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AYJ59_09705 IPR002313 Lysine-tRNA ligase, class II AYJ59_09705 IPR012340 Nucleic acid-binding, OB-fold AYJ59_09705 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_09705 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II AYJ59_09705 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AYJ59_09705 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AYJ59_09715 IPR011032 GroES-like superfamily AYJ59_09715 IPR020843 Polyketide synthase, enoylreductase domain AYJ59_09715 IPR013154 Alcohol dehydrogenase, N-terminal AYJ59_09715 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AYJ59_09715 IPR036291 NAD(P)-binding domain superfamily AYJ59_09715 IPR013149 Alcohol dehydrogenase, C-terminal AYJ59_09730 IPR018060 DNA binding HTH domain, AraC-type AYJ59_09730 IPR009594 Transcription regulator HTH, AraC, N-terminal AYJ59_09730 IPR009057 Homeobox-like domain superfamily AYJ59_09735 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYJ59_09735 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYJ59_09735 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AYJ59_09735 IPR036291 NAD(P)-binding domain superfamily AYJ59_09735 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AYJ59_09755 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_09755 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_09755 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_09755 IPR003660 HAMP domain AYJ59_09755 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_09755 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_09760 IPR039421 Type I protein exporter AYJ59_09760 IPR003593 AAA+ ATPase domain AYJ59_09760 IPR011527 ABC transporter type 1, transmembrane domain AYJ59_09760 IPR003439 ABC transporter-like AYJ59_09760 IPR017871 ABC transporter, conserved site AYJ59_09760 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09760 IPR036640 ABC transporter type 1, transmembrane domain superfamily AYJ59_09765 IPR001130 TatD family AYJ59_09765 IPR015991 Uncharacterised hydrolase TatD-type AYJ59_09765 IPR032466 Metal-dependent hydrolase AYJ59_09765 IPR018228 Deoxyribonuclease, TatD-related, conserved site AYJ59_09770 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AYJ59_09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09770 IPR015199 DNA polymerase III, delta subunit, C-terminal AYJ59_09770 IPR004622 DNA polymerase III, delta prime subunit AYJ59_09775 IPR039430 Thymidylate kinase-like domain AYJ59_09775 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09775 IPR018094 Thymidylate kinase AYJ59_09780 IPR003770 Endolytic murein transglycosylase AYJ59_09785 IPR001544 Aminotransferase class IV AYJ59_09785 IPR018300 Aminotransferase, class IV, conserved site AYJ59_09785 IPR017824 Aminodeoxychorismate lyase, class IV AYJ59_09785 IPR036038 Aminotransferase-like, PLP-dependent enzymes AYJ59_09790 IPR019999 Anthranilate synthase component I-like AYJ59_09790 IPR015890 Chorismate-utilising enzyme, C-terminal AYJ59_09790 IPR006805 Anthranilate synthase component I, N-terminal AYJ59_09790 IPR005801 ADC synthase AYJ59_09795 IPR000794 Beta-ketoacyl synthase AYJ59_09795 IPR014030 Beta-ketoacyl synthase, N-terminal AYJ59_09795 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AYJ59_09795 IPR016039 Thiolase-like AYJ59_09795 IPR018201 Beta-ketoacyl synthase, active site AYJ59_09795 IPR014031 Beta-ketoacyl synthase, C-terminal AYJ59_09795 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AYJ59_09800 IPR036736 ACP-like superfamily AYJ59_09800 IPR003231 Acyl carrier protein (ACP) AYJ59_09800 IPR009081 Phosphopantetheine binding ACP domain AYJ59_09800 IPR006162 Phosphopantetheine attachment site AYJ59_09805 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_09805 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_09805 IPR036291 NAD(P)-binding domain superfamily AYJ59_09805 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AYJ59_09810 IPR014043 Acyl transferase AYJ59_09810 IPR001227 Acyl transferase domain superfamily AYJ59_09810 IPR024925 Malonyl CoA-acyl carrier protein transacylase AYJ59_09810 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ59_09810 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AYJ59_09810 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AYJ59_09815 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 AYJ59_09815 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYJ59_09815 IPR016039 Thiolase-like AYJ59_09815 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal AYJ59_09820 IPR003664 Fatty acid synthesis PlsX protein AYJ59_09820 IPR012281 Phospholipid biosynthesis protein, PlsX-like AYJ59_09825 IPR002677 Ribosomal protein L32p AYJ59_09825 IPR011332 Zinc-binding ribosomal protein AYJ59_09835 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AYJ59_09835 IPR029001 Inosine triphosphate pyrophosphatase-like AYJ59_09840 IPR023214 HAD superfamily AYJ59_09840 IPR006439 HAD hydrolase, subfamily IA AYJ59_09840 IPR041492 Haloacid dehalogenase-like hydrolase AYJ59_09840 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ59_09840 IPR036412 HAD-like superfamily AYJ59_09840 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AYJ59_09840 IPR037512 Phosphoglycolate phosphatase, prokaryotic AYJ59_09845 IPR036986 RNA-binding S4 domain superfamily AYJ59_09845 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_09845 IPR006225 Pseudouridine synthase, RluC/RluD AYJ59_09845 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_09845 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_09845 IPR002942 RNA-binding S4 domain AYJ59_09850 IPR028878 Ribonuclease E AYJ59_09850 IPR022967 RNA-binding domain, S1 AYJ59_09850 IPR004659 Ribonuclease E/G AYJ59_09850 IPR021968 Polyribonucleotide phosphorylase C-terminal AYJ59_09850 IPR012340 Nucleic acid-binding, OB-fold AYJ59_09850 IPR003029 S1 domain AYJ59_09850 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AYJ59_09855 IPR017867 Protein-tyrosine phosphatase, low molecular weight AYJ59_09855 IPR023485 Phosphotyrosine protein phosphatase I AYJ59_09855 IPR036196 Phosphotyrosine protein phosphatase I superfamily AYJ59_09860 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_09860 IPR006225 Pseudouridine synthase, RluC/RluD AYJ59_09860 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_09860 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_09875 IPR033954 Disulphide bond isomerase, DsbC/G AYJ59_09875 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AYJ59_09875 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AYJ59_09875 IPR012336 Thioredoxin-like fold AYJ59_09875 IPR017937 Thioredoxin, conserved site AYJ59_09875 IPR036249 Thioredoxin-like superfamily AYJ59_09875 IPR013766 Thioredoxin domain AYJ59_09880 IPR002104 Integrase, catalytic domain AYJ59_09880 IPR013762 Integrase-like, catalytic domain superfamily AYJ59_09880 IPR023009 Tyrosine recombinase XerC/XerD AYJ59_09880 IPR011010 DNA breaking-rejoining enzyme, catalytic core AYJ59_09880 IPR010998 Integrase/recombinase, N-terminal AYJ59_09880 IPR004107 Integrase, SAM-like, N-terminal AYJ59_09880 IPR011932 Tyrosine recombinase XerD AYJ59_09885 IPR008991 Translation protein SH3-like domain superfamily AYJ59_09885 IPR001857 Ribosomal protein L19 AYJ59_09885 IPR038657 Ribosomal protein L19 superfamily AYJ59_09885 IPR018257 Ribosomal protein L19, conserved site AYJ59_09890 IPR029028 Alpha/beta knot methyltransferases AYJ59_09890 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AYJ59_09890 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AYJ59_09890 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_09890 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AYJ59_09895 IPR027275 PRC-barrel domain AYJ59_09895 IPR011961 16S rRNA processing protein RimM AYJ59_09895 IPR011033 PRC-barrel-like superfamily AYJ59_09895 IPR002676 RimM, N-terminal AYJ59_09895 IPR036976 RimM, N-terminal domain superfamily AYJ59_09895 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_09900 IPR023803 Ribosomal protein S16 domain superfamily AYJ59_09900 IPR020592 Ribosomal protein S16, conserved site AYJ59_09900 IPR000307 Ribosomal protein S16 AYJ59_09905 IPR011006 CheY-like superfamily AYJ59_09905 IPR001867 OmpR/PhoB-type DNA-binding domain AYJ59_09905 IPR001789 Signal transduction response regulator, receiver domain AYJ59_09905 IPR039420 Transcriptional regulatory protein WalR-like AYJ59_09905 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_09910 IPR003798 DNA recombination RmuC AYJ59_09930 IPR001992 Type II secretion system conserved site AYJ59_09930 IPR042094 Type II secretion system F domain superfamily AYJ59_09930 IPR018076 Type II secretion system F domain AYJ59_09930 IPR003004 GspF/PilC family AYJ59_09935 IPR001482 Type II/IV secretion system protein AYJ59_09935 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09935 IPR037257 General secretory system II, protein E, N-terminal superfamily AYJ59_09935 IPR003593 AAA+ ATPase domain AYJ59_09935 IPR013369 Type II secretion system GspE AYJ59_09935 IPR042181 Type II secretion system, protein E, N-terminal AYJ59_09945 IPR038591 NolW-like superfamily AYJ59_09945 IPR004845 Type II secretion system GspD, conserved site AYJ59_09945 IPR005644 NolW-like AYJ59_09945 IPR001775 GspD/PilQ family AYJ59_09945 IPR013356 Type II secretion system GspD AYJ59_09945 IPR004846 Type II/III secretion system AYJ59_09950 IPR003593 AAA+ ATPase domain AYJ59_09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09950 IPR036366 PGBD superfamily AYJ59_09950 IPR036365 PGBD-like superfamily AYJ59_09950 IPR002477 Peptidoglycan binding-like AYJ59_09960 IPR000506 Ketol-acid reductoisomerase, C-terminal AYJ59_09960 IPR013116 Ketol-acid reductoisomerase, N-terminal AYJ59_09960 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_09960 IPR013023 Ketol-acid reductoisomerase AYJ59_09960 IPR036291 NAD(P)-binding domain superfamily AYJ59_09960 IPR014359 Ketol-acid reductoisomerase, prokaryotic AYJ59_09965 IPR004789 Acetolactate synthase, small subunit AYJ59_09965 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AYJ59_09965 IPR019455 Acetolactate synthase, small subunit, C-terminal AYJ59_09965 IPR002912 ACT domain AYJ59_09965 IPR039557 AHAS, ACT domain AYJ59_09970 IPR039368 Acetolactate synthase large subunit, TPP binding domain AYJ59_09970 IPR012846 Acetolactate synthase, large subunit, biosynthetic AYJ59_09970 IPR029035 DHS-like NAD/FAD-binding domain superfamily AYJ59_09970 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AYJ59_09970 IPR000399 TPP-binding enzyme, conserved site AYJ59_09970 IPR029061 Thiamin diphosphate-binding fold AYJ59_09970 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AYJ59_09970 IPR012000 Thiamine pyrophosphate enzyme, central domain AYJ59_09975 IPR012337 Ribonuclease H-like superfamily AYJ59_09975 IPR022894 Oligoribonuclease AYJ59_09975 IPR036397 Ribonuclease H superfamily AYJ59_09975 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ59_09980 IPR022919 Peptidase M48, protease HtpX, putative AYJ59_09980 IPR001915 Peptidase M48 AYJ59_09985 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily AYJ59_09985 IPR001533 Pterin 4 alpha carbinolamine dehydratase AYJ59_09990 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AYJ59_09990 IPR010914 RsgA GTPase domain AYJ59_09990 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09990 IPR012340 Nucleic acid-binding, OB-fold AYJ59_09990 IPR004881 Ribosome biogenesis GTPase RsgA AYJ59_09995 IPR013611 Transport-associated OB, type 2 AYJ59_09995 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_09995 IPR003593 AAA+ ATPase domain AYJ59_09995 IPR015853 ABC transporter, ferric cation import, FbpC AYJ59_09995 IPR030287 Fe(3+) ions import ATP-binding protein FbpC AYJ59_09995 IPR017871 ABC transporter, conserved site AYJ59_09995 IPR008995 Molybdate/tungstate binding, C-terminal AYJ59_09995 IPR003439 ABC transporter-like AYJ59_10000 IPR026045 Ferric binding protein AYJ59_10005 IPR005667 Sulphate ABC transporter permease protein 2 AYJ59_10005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_10005 IPR035906 MetI-like superfamily AYJ59_10005 IPR011865 Sulphate ABC transporter, permease protein CysT AYJ59_10010 IPR036909 Cytochrome c-like domain superfamily AYJ59_10010 IPR008168 Cytochrome c, class IC AYJ59_10010 IPR009056 Cytochrome c-like domain AYJ59_10015 IPR009056 Cytochrome c-like domain AYJ59_10015 IPR036909 Cytochrome c-like domain superfamily AYJ59_10015 IPR024167 Cytochrome c4-like AYJ59_10020 IPR002912 ACT domain AYJ59_10020 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ59_10020 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AYJ59_10020 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AYJ59_10020 IPR036291 NAD(P)-binding domain superfamily AYJ59_10020 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AYJ59_10025 IPR036318 FAD-binding, type PCMH-like superfamily AYJ59_10025 IPR004113 FAD-linked oxidase, C-terminal AYJ59_10025 IPR016164 FAD-linked oxidase-like, C-terminal AYJ59_10025 IPR009051 Alpha-helical ferredoxin AYJ59_10025 IPR006094 FAD linked oxidase, N-terminal AYJ59_10025 IPR016166 FAD-binding domain, PCMH-type AYJ59_10025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AYJ59_10025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AYJ59_10030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10030 IPR003593 AAA+ ATPase domain AYJ59_10030 IPR005225 Small GTP-binding protein domain AYJ59_10030 IPR015946 K homology domain-like, alpha/beta AYJ59_10030 IPR032859 GTPase Der, C-terminal KH-domain-like AYJ59_10030 IPR016484 GTP-binding protein EngA AYJ59_10030 IPR006073 GTP binding domain AYJ59_10030 IPR031166 EngA-type guanine nucleotide-binding (G) domain AYJ59_10035 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AYJ59_10035 IPR017687 Outer membrane protein assembly factor BamB AYJ59_10035 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AYJ59_10035 IPR002372 Pyrrolo-quinoline quinone repeat AYJ59_10035 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AYJ59_10045 IPR006195 Aminoacyl-tRNA synthetase, class II AYJ59_10045 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AYJ59_10045 IPR015807 Histidine-tRNA ligase AYJ59_10045 IPR004154 Anticodon-binding AYJ59_10045 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AYJ59_10045 IPR033656 Histidyl-anticodon-binding AYJ59_10045 IPR036621 Anticodon-binding domain superfamily AYJ59_10055 IPR007197 Radical SAM AYJ59_10055 IPR027492 Dual-specificity RNA methyltransferase RlmN AYJ59_10055 IPR040072 Methyltransferase (Class A) AYJ59_10055 IPR013785 Aldolase-type TIM barrel AYJ59_10055 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AYJ59_10060 IPR023005 Nucleoside diphosphate kinase, active site AYJ59_10060 IPR001564 Nucleoside diphosphate kinase AYJ59_10060 IPR034907 Nucleoside diphosphate kinase-like domain AYJ59_10060 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AYJ59_10065 IPR011302 Iron-binding protein IscA, proteobacteria AYJ59_10065 IPR035903 HesB-like domain superfamily AYJ59_10065 IPR017870 FeS cluster insertion, C-terminal, conserved site AYJ59_10065 IPR016092 FeS cluster insertion protein AYJ59_10065 IPR000361 FeS cluster biogenesis AYJ59_10070 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_10070 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_10070 IPR000944 Transcription regulator Rrf2-type AYJ59_10070 IPR010242 Transcription factor HTH, IscR AYJ59_10070 IPR030489 Transcription regulator Rrf2-type, conserved site AYJ59_10075 IPR018357 Hexapeptide transferase, conserved site AYJ59_10075 IPR042122 Serine acetyltransferase, N-terminal domain superfamily AYJ59_10075 IPR005881 Serine O-acetyltransferase AYJ59_10075 IPR011004 Trimeric LpxA-like superfamily AYJ59_10075 IPR001451 Hexapeptide repeat AYJ59_10080 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_10080 IPR001537 tRNA/rRNA methyltransferase, SpoU type AYJ59_10080 IPR004384 RNA methyltransferase TrmJ/LasT AYJ59_10080 IPR029028 Alpha/beta knot methyltransferases AYJ59_10085 IPR020583 Inositol monophosphatase, metal-binding site AYJ59_10085 IPR000760 Inositol monophosphatase-like AYJ59_10085 IPR033942 Inositol monophosphatase AYJ59_10085 IPR020550 Inositol monophosphatase, conserved site AYJ59_10085 IPR022337 Inositol monophosphatase, SuhB AYJ59_10100 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AYJ59_10100 IPR005671 2-isopropylmalate synthase, bacterial-type AYJ59_10100 IPR000891 Pyruvate carboxyltransferase AYJ59_10100 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AYJ59_10100 IPR013785 Aldolase-type TIM barrel AYJ59_10100 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AYJ59_10105 IPR000462 CDP-alcohol phosphatidyltransferase AYJ59_10105 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AYJ59_10110 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AYJ59_10110 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AYJ59_10110 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AYJ59_10110 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AYJ59_10110 IPR036291 NAD(P)-binding domain superfamily AYJ59_10110 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AYJ59_10110 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AYJ59_10110 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AYJ59_10115 IPR035482 Phosphoglucose isomerase, SIS domain 2 AYJ59_10115 IPR035476 Phosphoglucose isomerase, SIS domain 1 AYJ59_10115 IPR018189 Phosphoglucose isomerase, conserved site AYJ59_10115 IPR023096 Phosphoglucose isomerase, C-terminal AYJ59_10115 IPR001672 Phosphoglucose isomerase (PGI) AYJ59_10120 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_10120 IPR005835 Nucleotidyl transferase domain AYJ59_10120 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AYJ59_10125 IPR001455 TusA-like domain AYJ59_10125 IPR036868 TusA-like domain superfamily AYJ59_10130 IPR013026 Tetratricopeptide repeat-containing domain AYJ59_10130 IPR030873 Beta-barrel assembly-enhancing protease AYJ59_10130 IPR011990 Tetratricopeptide-like helical domain superfamily AYJ59_10130 IPR001915 Peptidase M48 AYJ59_10130 IPR019734 Tetratricopeptide repeat AYJ59_10150 IPR025710 L-cysteine S-thiosulfotransferase subunit SoxA AYJ59_10150 IPR036909 Cytochrome c-like domain superfamily AYJ59_10160 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AYJ59_10160 IPR037237 IlvD/EDD, N-terminal domain AYJ59_10160 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AYJ59_10160 IPR004404 Dihydroxy-acid dehydratase AYJ59_10160 IPR042096 Dihydroxy-acid dehydratase, C-terminal AYJ59_10165 IPR010167 Amino-acid N-acetyltransferase AYJ59_10165 IPR033719 N-acetylglutamate synthase, kinase-like domain AYJ59_10165 IPR000182 GNAT domain AYJ59_10165 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_10165 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_10165 IPR016181 Acyl-CoA N-acyltransferase AYJ59_10170 IPR012337 Ribonuclease H-like superfamily AYJ59_10170 IPR013520 Exonuclease, RNase T/DNA polymerase III AYJ59_10170 IPR005987 Ribonuclease T AYJ59_10170 IPR036397 Ribonuclease H superfamily AYJ59_10175 IPR036249 Thioredoxin-like superfamily AYJ59_10175 IPR004480 Monothiol glutaredoxin-related AYJ59_10175 IPR014434 Monothiol glutaredoxin AYJ59_10175 IPR033658 Glutaredoxin, PICOT-like AYJ59_10175 IPR002109 Glutaredoxin AYJ59_10180 IPR017932 Glutamine amidotransferase type 2 domain AYJ59_10180 IPR033738 Asparagine synthase, N-terminal domain AYJ59_10180 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_10180 IPR006426 Asparagine synthase, glutamine-hydrolyzing AYJ59_10180 IPR001962 Asparagine synthase AYJ59_10185 IPR001977 Dephospho-CoA kinase AYJ59_10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10195 IPR022998 Thiamine phosphate synthase/TenI AYJ59_10195 IPR036206 Thiamin phosphate synthase superfamily AYJ59_10195 IPR013785 Aldolase-type TIM barrel AYJ59_10195 IPR034291 Thiamine phosphate synthase AYJ59_10200 IPR005861 Histidinol-phosphate aminotransferase family AYJ59_10200 IPR004839 Aminotransferase, class I/classII AYJ59_10200 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AYJ59_10200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_10200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_10200 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_10205 IPR002813 Arginine biosynthesis protein ArgJ AYJ59_10205 IPR016117 ArgJ-like domain superfamily AYJ59_10205 IPR042195 ArgJ beta chain, C-terminal domain AYJ59_10210 IPR036670 SecA, preprotein cross-linking domain superfamily AYJ59_10210 IPR036266 SecA, Wing/Scaffold superfamily AYJ59_10210 IPR011116 SecA Wing/Scaffold AYJ59_10210 IPR011130 SecA, preprotein cross-linking domain AYJ59_10210 IPR014018 SecA motor DEAD AYJ59_10210 IPR020937 SecA conserved site AYJ59_10210 IPR000185 Protein translocase subunit SecA AYJ59_10210 IPR004027 SEC-C motif AYJ59_10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10210 IPR011115 SecA DEAD-like, N-terminal AYJ59_10215 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_10215 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AYJ59_10215 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AYJ59_10215 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AYJ59_10220 IPR003494 SHS2 domain inserted in FtsA AYJ59_10220 IPR020823 Cell division protein FtsA AYJ59_10225 IPR026579 Cell division protein FtsQ AYJ59_10225 IPR005548 Cell division protein FtsQ/DivIB AYJ59_10225 IPR034746 POTRA domain AYJ59_10225 IPR013685 POTRA domain, FtsQ-type AYJ59_10230 IPR011095 D-alanine--D-alanine ligase, C-terminal AYJ59_10230 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AYJ59_10230 IPR005905 D-alanine--D-alanine ligase AYJ59_10230 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AYJ59_10230 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_10230 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_10230 IPR011761 ATP-grasp fold AYJ59_10235 IPR036565 Mur-like, catalytic domain superfamily AYJ59_10235 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AYJ59_10235 IPR000713 Mur ligase, N-terminal catalytic domain AYJ59_10235 IPR013221 Mur ligase, central AYJ59_10235 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_10235 IPR004101 Mur ligase, C-terminal AYJ59_10245 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_10245 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_10245 IPR016454 Cysteine desulfurase AYJ59_10245 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_10245 IPR010970 Cysteine desulfurase, SufS AYJ59_10245 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AYJ59_10245 IPR000192 Aminotransferase class V domain AYJ59_10250 IPR000825 SUF system FeS cluster assembly, SufBD AYJ59_10250 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AYJ59_10250 IPR011542 SUF system FeS cluster assembly, SufD AYJ59_10255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10255 IPR010230 FeS cluster assembly SUF system, ATPase SufC AYJ59_10255 IPR003439 ABC transporter-like AYJ59_10255 IPR017871 ABC transporter, conserved site AYJ59_10255 IPR003593 AAA+ ATPase domain AYJ59_10260 IPR000825 SUF system FeS cluster assembly, SufBD AYJ59_10260 IPR010231 SUF system FeS cluster assembly, SufB AYJ59_10260 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AYJ59_10270 IPR006127 Periplasmic solute binding protein, ZnuA-like AYJ59_10270 IPR035520 High-affinity zinc uptake system protein ZnuA AYJ59_10275 IPR017882 Zinc import ATP-binding protein ZnuC AYJ59_10275 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10275 IPR003593 AAA+ ATPase domain AYJ59_10275 IPR017871 ABC transporter, conserved site AYJ59_10275 IPR003439 ABC transporter-like AYJ59_10280 IPR001626 ABC transporter, TroCD-like AYJ59_10280 IPR037294 ABC transporter, BtuC-like AYJ59_10285 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_10285 IPR003660 HAMP domain AYJ59_10285 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site AYJ59_10285 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding AYJ59_10285 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily AYJ59_10285 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_10290 IPR012259 Dihydrofolate reductase AYJ59_10290 IPR024072 Dihydrofolate reductase-like domain superfamily AYJ59_10290 IPR017925 Dihydrofolate reductase conserved site AYJ59_10290 IPR001796 Dihydrofolate reductase domain AYJ59_10295 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AYJ59_10295 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AYJ59_10295 IPR000398 Thymidylate synthase AYJ59_10300 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AYJ59_10305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_10305 IPR033479 Double Cache domain 1 AYJ59_10305 IPR003660 HAMP domain AYJ59_10305 IPR029151 Periplasmic sensor-like domain superfamily AYJ59_10310 IPR002347 Short-chain dehydrogenase/reductase SDR AYJ59_10310 IPR036291 NAD(P)-binding domain superfamily AYJ59_10310 IPR020904 Short-chain dehydrogenase/reductase, conserved site AYJ59_10315 IPR007235 Glycosyl transferase, family 28, C-terminal AYJ59_10315 IPR006009 N-acetylglucosaminyltransferase, MurG AYJ59_10315 IPR004276 Glycosyltransferase family 28, N-terminal domain AYJ59_10320 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AYJ59_10320 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AYJ59_10320 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AYJ59_10325 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AYJ59_10325 IPR004101 Mur ligase, C-terminal AYJ59_10325 IPR036565 Mur-like, catalytic domain superfamily AYJ59_10325 IPR013221 Mur ligase, central AYJ59_10325 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_10330 IPR000715 Glycosyl transferase, family 4 AYJ59_10330 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AYJ59_10330 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AYJ59_10335 IPR013221 Mur ligase, central AYJ59_10335 IPR035911 MurE/MurF, N-terminal AYJ59_10335 IPR000713 Mur ligase, N-terminal catalytic domain AYJ59_10335 IPR004101 Mur ligase, C-terminal AYJ59_10335 IPR036565 Mur-like, catalytic domain superfamily AYJ59_10335 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_10335 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase AYJ59_10340 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AYJ59_10340 IPR035911 MurE/MurF, N-terminal AYJ59_10340 IPR036565 Mur-like, catalytic domain superfamily AYJ59_10340 IPR013221 Mur ligase, central AYJ59_10340 IPR036615 Mur ligase, C-terminal domain superfamily AYJ59_10340 IPR004101 Mur ligase, C-terminal AYJ59_10340 IPR000713 Mur ligase, N-terminal catalytic domain AYJ59_10345 IPR012338 Beta-lactamase/transpeptidase-like AYJ59_10345 IPR001460 Penicillin-binding protein, transpeptidase AYJ59_10345 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AYJ59_10345 IPR005311 Penicillin-binding protein, dimerisation domain AYJ59_10345 IPR037532 Peptidoglycan D,D-transpeptidase FtsI AYJ59_10355 IPR008280 Tubulin/FtsZ, C-terminal AYJ59_10355 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AYJ59_10355 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AYJ59_10355 IPR003008 Tubulin/FtsZ, GTPase domain AYJ59_10355 IPR024757 Cell division protein FtsZ, C-terminal AYJ59_10355 IPR000158 Cell division protein FtsZ AYJ59_10355 IPR020805 Cell division protein FtsZ, conserved site AYJ59_10360 IPR002903 Ribosomal RNA small subunit methyltransferase H AYJ59_10360 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AYJ59_10360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_10365 IPR035644 MraZ, C-terminal AYJ59_10365 IPR038619 MraZ superfamily AYJ59_10365 IPR037914 SpoVT-AbrB domain superfamily AYJ59_10365 IPR020603 MraZ domain AYJ59_10365 IPR003444 Transcriptional regulator MraZ AYJ59_10365 IPR007159 SpoVT-AbrB domain AYJ59_10365 IPR035642 MraZ, N-terminal AYJ59_10385 IPR001610 PAC motif AYJ59_10385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_10385 IPR000014 PAS domain AYJ59_10385 IPR013655 PAS fold-3 AYJ59_10385 IPR000700 PAS-associated, C-terminal AYJ59_10385 IPR035965 PAS domain superfamily AYJ59_10385 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_10395 IPR010225 ATP-dependent helicase HrpB AYJ59_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10395 IPR014001 Helicase superfamily 1/2, ATP-binding domain AYJ59_10395 IPR007502 Helicase-associated domain AYJ59_10395 IPR011545 DEAD/DEAH box helicase domain AYJ59_10395 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AYJ59_10395 IPR001650 Helicase, C-terminal AYJ59_10400 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_10400 IPR003660 HAMP domain AYJ59_10400 IPR001610 PAC motif AYJ59_10400 IPR000014 PAS domain AYJ59_10400 IPR013655 PAS fold-3 AYJ59_10400 IPR035965 PAS domain superfamily AYJ59_10400 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_10415 IPR029787 Nucleotide cyclase AYJ59_10415 IPR000160 GGDEF domain AYJ59_10415 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AYJ59_10425 IPR038766 Membrane component of ABC transporter, predicted AYJ59_10430 IPR017871 ABC transporter, conserved site AYJ59_10430 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10430 IPR003593 AAA+ ATPase domain AYJ59_10430 IPR003439 ABC transporter-like AYJ59_10435 IPR013830 SGNH hydrolase-type esterase domain AYJ59_10435 IPR008265 Lipase, GDSL, active site AYJ59_10435 IPR036514 SGNH hydrolase superfamily AYJ59_10460 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AYJ59_10460 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AYJ59_10460 IPR012675 Beta-grasp domain superfamily AYJ59_10460 IPR010241 Ferredoxin [2Fe-2S], plant AYJ59_10460 IPR036010 2Fe-2S ferredoxin-like superfamily AYJ59_10465 IPR011862 Phosphate binding protein AYJ59_10465 IPR024370 PBP domain AYJ59_10470 IPR001204 Phosphate transporter AYJ59_10475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_10475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_10475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_10475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_10475 IPR000014 PAS domain AYJ59_10475 IPR035965 PAS domain superfamily AYJ59_10475 IPR005467 Histidine kinase domain AYJ59_10475 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_10475 IPR021766 Phosphate regulon sensor protein PhoR AYJ59_10475 IPR013767 PAS fold AYJ59_10475 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AYJ59_10480 IPR011006 CheY-like superfamily AYJ59_10480 IPR001867 OmpR/PhoB-type DNA-binding domain AYJ59_10480 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_10480 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AYJ59_10480 IPR001789 Signal transduction response regulator, receiver domain AYJ59_10480 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_10480 IPR039420 Transcriptional regulatory protein WalR-like AYJ59_10485 IPR028366 Phosphate transport system protein PhoU AYJ59_10485 IPR026022 PhoU domain AYJ59_10485 IPR038078 PhoU-like domain superfamily AYJ59_10490 IPR005670 Phosphate transport system permease protein 1 AYJ59_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10490 IPR015850 ABC transporter, phosphate import, PstB AYJ59_10490 IPR017871 ABC transporter, conserved site AYJ59_10490 IPR003439 ABC transporter-like AYJ59_10490 IPR003593 AAA+ ATPase domain AYJ59_10495 IPR035906 MetI-like superfamily AYJ59_10495 IPR011864 Phosphate ABC transporter, permease protein PstC AYJ59_10495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_10505 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AYJ59_10505 IPR027303 Glutamine synthetase, glycine-rich site AYJ59_10505 IPR036651 Glutamine synthetase, N-terminal domain superfamily AYJ59_10505 IPR008147 Glutamine synthetase, beta-Grasp domain AYJ59_10505 IPR027302 Glutamine synthetase, N-terminal conserved site AYJ59_10505 IPR008146 Glutamine synthetase, catalytic domain AYJ59_10505 IPR001637 Glutamine synthetase class-I, adenylation site AYJ59_10505 IPR004809 Glutamine synthetase type I AYJ59_10515 IPR033939 Branched-chain aminotransferase AYJ59_10515 IPR005785 Branched-chain amino acid aminotransferase I AYJ59_10515 IPR001544 Aminotransferase class IV AYJ59_10515 IPR018300 Aminotransferase, class IV, conserved site AYJ59_10515 IPR036038 Aminotransferase-like, PLP-dependent enzymes AYJ59_10520 IPR004636 Acetylornithine/Succinylornithine transaminase family AYJ59_10520 IPR005814 Aminotransferase class-III AYJ59_10520 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_10520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_10520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_10525 IPR002292 Ornithine/putrescine carbamoyltransferase AYJ59_10525 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AYJ59_10525 IPR006130 Aspartate/ornithine carbamoyltransferase AYJ59_10525 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AYJ59_10525 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AYJ59_10525 IPR024904 Ornithine carbamoyltransferase AYJ59_10530 IPR023628 Recombination protein RecR, C4-type zinc finger AYJ59_10530 IPR015967 Recombination protein RecR, conserved site AYJ59_10530 IPR006171 TOPRIM domain AYJ59_10530 IPR000093 DNA recombination protein RecR AYJ59_10530 IPR034137 RecR, TOPRIM domain AYJ59_10530 IPR023627 Recombination protein RecR AYJ59_10535 IPR004401 Nucleoid-associated protein YbaB/EbfC family AYJ59_10535 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AYJ59_10540 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily AYJ59_10540 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10540 IPR003593 AAA+ ATPase domain AYJ59_10540 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AYJ59_10540 IPR021029 DNA polymerase III, tau subunit, domain V AYJ59_10540 IPR022754 DNA polymerase III, gamma subunit, domain III AYJ59_10540 IPR012763 DNA polymerase III, subunit gamma/ tau AYJ59_10555 IPR023753 FAD/NAD(P)-binding domain AYJ59_10555 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_10565 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA AYJ59_10565 IPR006143 RND efflux pump, membrane fusion protein AYJ59_10565 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_10585 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_10585 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_10585 IPR027795 CASTOR, ACT domain AYJ59_10590 IPR011051 RmlC-like cupin domain superfamily AYJ59_10590 IPR014710 RmlC-like jelly roll fold AYJ59_10590 IPR010462 Ectoine synthase AYJ59_10595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_10595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_10595 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_10595 IPR004637 2,4-diaminobutyrate 4-transaminase AYJ59_10595 IPR005814 Aminotransferase class-III AYJ59_10595 IPR012773 Ectoine biosynthetic protein AYJ59_10600 IPR016181 Acyl-CoA N-acyltransferase AYJ59_10600 IPR000182 GNAT domain AYJ59_10600 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AYJ59_10615 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AYJ59_10615 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AYJ59_10615 IPR023459 Transcription elongation factor GreA/GreB family AYJ59_10615 IPR028624 Transcription elongation factor GreA/GreB AYJ59_10615 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AYJ59_10615 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AYJ59_10615 IPR006358 Transcription elongation factor GreB AYJ59_10615 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AYJ59_10625 IPR011833 Glycogen/starch/alpha-glucan phosphorylase AYJ59_10625 IPR000811 Glycosyl transferase, family 35 AYJ59_10625 IPR035090 Phosphorylase pyridoxal-phosphate attachment site AYJ59_10630 IPR001296 Glycosyl transferase, family 1 AYJ59_10630 IPR011835 Bacterial/plant glycogen synthase AYJ59_10630 IPR013534 Starch synthase, catalytic domain AYJ59_10635 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta AYJ59_10635 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB AYJ59_10635 IPR037439 1,4-alpha-glucan-branching enzyme AYJ59_10635 IPR017853 Glycoside hydrolase superfamily AYJ59_10635 IPR013780 Glycosyl hydrolase, all-beta AYJ59_10635 IPR004193 Glycoside hydrolase, family 13, N-terminal AYJ59_10635 IPR006047 Glycosyl hydrolase, family 13, catalytic domain AYJ59_10635 IPR013783 Immunoglobulin-like fold AYJ59_10635 IPR014756 Immunoglobulin E-set AYJ59_10640 IPR017853 Glycoside hydrolase superfamily AYJ59_10640 IPR003385 Glycoside hydrolase, family 77 AYJ59_10650 IPR011004 Trimeric LpxA-like superfamily AYJ59_10650 IPR029044 Nucleotide-diphospho-sugar transferases AYJ59_10650 IPR005835 Nucleotidyl transferase domain AYJ59_10650 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial AYJ59_10650 IPR005836 ADP-glucose pyrophosphorylase, conserved site AYJ59_10650 IPR011831 Glucose-1-phosphate adenylyltransferase AYJ59_10655 IPR003836 Glucokinase AYJ59_10660 IPR001347 Sugar isomerase (SIS) AYJ59_10660 IPR035461 GmhA/DiaA AYJ59_10660 IPR004515 Phosphoheptose isomerase AYJ59_10665 IPR011913 RfaE bifunctional protein, domain I AYJ59_10665 IPR023030 Bifunctional protein HldE AYJ59_10665 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AYJ59_10665 IPR004821 Cytidyltransferase-like domain AYJ59_10665 IPR011611 Carbohydrate kinase PfkB AYJ59_10665 IPR011914 RfaE bifunctional protein, domain II AYJ59_10665 IPR029056 Ribokinase-like AYJ59_10665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_10675 IPR000644 CBS domain AYJ59_10675 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AYJ59_10675 IPR001347 Sugar isomerase (SIS) AYJ59_10675 IPR035474 KpsF-like, SIS domain AYJ59_10680 IPR039901 3-deoxy-D-manno-octulosonic acid transferase AYJ59_10680 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AYJ59_10680 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily AYJ59_10690 IPR007197 Radical SAM AYJ59_10690 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN AYJ59_10690 IPR034505 Anaerobic coproporphyrinogen-III oxidase AYJ59_10690 IPR006638 Elp3/MiaB/NifB AYJ59_10690 IPR023404 Radical SAM, alpha/beta horseshoe AYJ59_10690 IPR010723 HemN, C-terminal AYJ59_10695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_10695 IPR019614 S-adenosylmethionine-dependent methyltransferase AYJ59_10695 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AYJ59_10695 IPR004114 THUMP domain AYJ59_10695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_10695 IPR000241 Putative RNA methylase domain AYJ59_10700 IPR031304 Transglycosylase SLT domain 2 AYJ59_10700 IPR011757 Lytic transglycosylase MltB AYJ59_10700 IPR023346 Lysozyme-like domain superfamily AYJ59_10705 IPR001872 Peptidase A8, signal peptidase II AYJ59_10710 IPR010663 Zinc finger, FPG/IleRS-type AYJ59_10710 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_10710 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_10710 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain AYJ59_10710 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AYJ59_10710 IPR002301 Isoleucine-tRNA ligase AYJ59_10710 IPR002300 Aminoacyl-tRNA synthetase, class Ia AYJ59_10710 IPR023585 Isoleucine-tRNA ligase, type 1 AYJ59_10710 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AYJ59_10710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_10715 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_10715 IPR015864 FAD synthetase AYJ59_10715 IPR023468 Riboflavin kinase AYJ59_10715 IPR002606 Riboflavin kinase, bacterial AYJ59_10715 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AYJ59_10715 IPR023465 Riboflavin kinase domain superfamily AYJ59_10720 IPR004268 Peptidoglycan biosynthesis protein MurJ AYJ59_10725 IPR036510 Ribosomal protein S20 superfamily AYJ59_10725 IPR002583 Ribosomal protein S20 AYJ59_10750 IPR036541 Phospholipase A1 superfamily AYJ59_10750 IPR003187 Phospholipase A1 AYJ59_10755 IPR002641 Patatin-like phospholipase domain AYJ59_10755 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AYJ59_10755 IPR001423 Lysophospholipase patatin, conserved site AYJ59_10770 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AYJ59_10770 IPR003742 RNA methyltransferase RlmH AYJ59_10770 IPR029028 Alpha/beta knot methyltransferases AYJ59_10775 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AYJ59_10780 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase AYJ59_10780 IPR004821 Cytidyltransferase-like domain AYJ59_10780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_10790 IPR000965 GPR domain AYJ59_10790 IPR012134 Glutamate-5-semialdehyde dehydrogenase AYJ59_10790 IPR015590 Aldehyde dehydrogenase domain AYJ59_10790 IPR016163 Aldehyde dehydrogenase, C-terminal AYJ59_10790 IPR016161 Aldehyde/histidinol dehydrogenase AYJ59_10790 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AYJ59_10790 IPR016162 Aldehyde dehydrogenase, N-terminal AYJ59_10805 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_10805 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_10805 IPR002300 Aminoacyl-tRNA synthetase, class Ia AYJ59_10805 IPR002302 Leucine-tRNA ligase AYJ59_10805 IPR025709 Leucyl-tRNA synthetase, editing domain AYJ59_10805 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AYJ59_10805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_10805 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AYJ59_10815 IPR036526 Carbon-nitrogen hydrolase superfamily AYJ59_10815 IPR004563 Apolipoprotein N-acyltransferase AYJ59_10815 IPR003010 Carbon-nitrogen hydrolase AYJ59_10820 IPR000644 CBS domain AYJ59_10820 IPR036318 FAD-binding, type PCMH-like superfamily AYJ59_10820 IPR005170 Transporter-associated domain AYJ59_10820 IPR016169 FAD-binding, type PCMH, subdomain 2 AYJ59_10825 IPR023091 Metalloprotease catalytic domain superfamily, predicted AYJ59_10825 IPR002036 Endoribonuclease YbeY AYJ59_10825 IPR020549 Endoribonuclease YbeY, conserved site AYJ59_10830 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10830 IPR003714 PhoH-like protein AYJ59_10835 IPR006638 Elp3/MiaB/NifB AYJ59_10835 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AYJ59_10835 IPR005839 Methylthiotransferase AYJ59_10835 IPR038135 Methylthiotransferase, N-terminal domain superfamily AYJ59_10835 IPR013848 Methylthiotransferase, N-terminal AYJ59_10835 IPR020612 Methylthiotransferase, conserved site AYJ59_10835 IPR007197 Radical SAM AYJ59_10835 IPR023404 Radical SAM, alpha/beta horseshoe AYJ59_10835 IPR002792 TRAM domain AYJ59_10840 IPR012902 Prokaryotic N-terminal methylation site AYJ59_10840 IPR001082 Fimbrial protein pilin AYJ59_10845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_10845 IPR001610 PAC motif AYJ59_10845 IPR000014 PAS domain AYJ59_10845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_10845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_10845 IPR005467 Histidine kinase domain AYJ59_10845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_10845 IPR013767 PAS fold AYJ59_10845 IPR035965 PAS domain superfamily AYJ59_10845 IPR000700 PAS-associated, C-terminal AYJ59_10845 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_10850 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10850 IPR001789 Signal transduction response regulator, receiver domain AYJ59_10850 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_10850 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_10850 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AYJ59_10850 IPR002197 DNA binding HTH domain, Fis-type AYJ59_10850 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_10850 IPR009057 Homeobox-like domain superfamily AYJ59_10850 IPR003593 AAA+ ATPase domain AYJ59_10850 IPR011006 CheY-like superfamily AYJ59_10850 IPR010114 DNA-binding transcriptional regulator NtrC AYJ59_10855 IPR012902 Prokaryotic N-terminal methylation site AYJ59_10855 IPR013545 Type II secretion system protein G AYJ59_10855 IPR000983 Bacterial general secretion pathway protein G-type pilin AYJ59_10855 IPR010054 General secretion pathway protein G AYJ59_10880 IPR023614 Porin domain superfamily AYJ59_10880 IPR001702 Porin, Gram-negative type AYJ59_10880 IPR013793 Porin, Gram-negative type, conserved site AYJ59_10880 IPR002299 Porin, Neisseria sp. type AYJ59_10880 IPR033900 Porin domain, Gram-negative type AYJ59_10885 IPR000788 Ribonucleotide reductase large subunit, C-terminal AYJ59_10885 IPR039718 Ribonucleoside-diphosphate reductase large subunit AYJ59_10885 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AYJ59_10885 IPR013509 Ribonucleotide reductase large subunit, N-terminal AYJ59_10885 IPR005144 ATP-cone domain AYJ59_10885 IPR013346 Ribonucleotide reductase, class I , alpha subunit AYJ59_10890 IPR023035 Ribosomal protein S9, bacterial/plastid AYJ59_10890 IPR000754 Ribosomal protein S9 AYJ59_10890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_10890 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_10890 IPR020574 Ribosomal protein S9, conserved site AYJ59_10895 IPR005822 Ribosomal protein L13 AYJ59_10895 IPR005823 Ribosomal protein L13, bacterial-type AYJ59_10895 IPR023563 Ribosomal protein L13, conserved site AYJ59_10895 IPR036899 Ribosomal protein L13 superfamily AYJ59_10915 IPR029787 Nucleotide cyclase AYJ59_10915 IPR001789 Signal transduction response regulator, receiver domain AYJ59_10915 IPR000160 GGDEF domain AYJ59_10915 IPR011006 CheY-like superfamily AYJ59_10920 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AYJ59_10920 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AYJ59_10920 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_10925 IPR001036 Acriflavin resistance protein AYJ59_10925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_10930 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB AYJ59_10930 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_10930 IPR006143 RND efflux pump, membrane fusion protein AYJ59_10945 IPR020921 Erythronate-4-phosphate dehydrogenase AYJ59_10945 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYJ59_10945 IPR038251 PdxB, dimerisation domain superfamily AYJ59_10945 IPR036291 NAD(P)-binding domain superfamily AYJ59_10945 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AYJ59_10945 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain AYJ59_10950 IPR016796 Uncharacterised conserved protein UCP021774 AYJ59_10950 IPR035923 TT1751-like domain superfamily AYJ59_10950 IPR005180 Domain of unknown function DUF302 AYJ59_10955 IPR042117 OMPP1/FadL/TodX superfamily AYJ59_10970 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AYJ59_10970 IPR013766 Thioredoxin domain AYJ59_10970 IPR017937 Thioredoxin, conserved site AYJ59_10970 IPR036249 Thioredoxin-like superfamily AYJ59_10970 IPR022910 Thiol:disulphide interchange protein DsbD AYJ59_10970 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AYJ59_10970 IPR035671 DsbD gamma AYJ59_10970 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AYJ59_10975 IPR001874 Dehydroquinase, class II AYJ59_10975 IPR018509 Dehydroquinase, class II, conserved site AYJ59_10975 IPR036441 Dehydroquinase, class II superfamily AYJ59_10980 IPR001249 Acetyl-CoA biotin carboxyl carrier AYJ59_10980 IPR001882 Biotin-binding site AYJ59_10980 IPR000089 Biotin/lipoyl attachment AYJ59_10980 IPR011053 Single hybrid motif AYJ59_10985 IPR005481 Biotin carboxylase-like, N-terminal domain AYJ59_10985 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_10985 IPR011761 ATP-grasp fold AYJ59_10985 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AYJ59_10985 IPR011054 Rudiment single hybrid motif AYJ59_10985 IPR005482 Biotin carboxylase, C-terminal AYJ59_10985 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AYJ59_10985 IPR011764 Biotin carboxylation domain AYJ59_10985 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_10990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_10990 IPR004498 Ribosomal protein L11 methyltransferase AYJ59_10995 IPR013785 Aldolase-type TIM barrel AYJ59_10995 IPR035587 DUS-like, FMN-binding domain AYJ59_10995 IPR032887 tRNA-dihydrouridine synthase B AYJ59_10995 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AYJ59_10995 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AYJ59_10995 IPR001269 tRNA-dihydrouridine synthase AYJ59_10995 IPR018517 tRNA-dihydrouridine synthase, conserved site AYJ59_11000 IPR002197 DNA binding HTH domain, Fis-type AYJ59_11000 IPR009057 Homeobox-like domain superfamily AYJ59_11000 IPR005412 DNA-binding protein Fis AYJ59_11005 IPR024051 AICAR transformylase, duplicated domain superfamily AYJ59_11005 IPR036914 Methylglyoxal synthase-like domain superfamily AYJ59_11005 IPR002695 Bifunctional purine biosynthesis protein PurH-like AYJ59_11005 IPR011607 Methylglyoxal synthase-like domain AYJ59_11005 IPR016193 Cytidine deaminase-like AYJ59_11010 IPR011054 Rudiment single hybrid motif AYJ59_11010 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AYJ59_11010 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AYJ59_11010 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AYJ59_11010 IPR000115 Phosphoribosylglycinamide synthetase AYJ59_11010 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYJ59_11010 IPR016185 Pre-ATP-grasp domain superfamily AYJ59_11010 IPR013815 ATP-grasp fold, subdomain 1 AYJ59_11010 IPR011761 ATP-grasp fold AYJ59_11010 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AYJ59_11025 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_11025 IPR002035 von Willebrand factor, type A AYJ59_11030 IPR013615 CbbQ/NirQ/NorQ, C-terminal AYJ59_11030 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11030 IPR011704 ATPase, dynein-related, AAA domain AYJ59_11035 IPR000894 Ribulose bisphosphate carboxylase small chain, domain AYJ59_11035 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily AYJ59_11040 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I AYJ59_11040 IPR036422 RuBisCO large subunit, N-terminal domain superfamily AYJ59_11040 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal AYJ59_11040 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily AYJ59_11040 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal AYJ59_11040 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site AYJ59_11040 IPR033966 RuBisCO AYJ59_11045 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_11045 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_11045 IPR005119 LysR, substrate-binding AYJ59_11045 IPR000847 Transcription regulator HTH, LysR AYJ59_11050 IPR036390 Winged helix DNA-binding domain superfamily AYJ59_11050 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_11050 IPR000847 Transcription regulator HTH, LysR AYJ59_11050 IPR005119 LysR, substrate-binding AYJ59_11055 IPR033966 RuBisCO AYJ59_11055 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II AYJ59_11055 IPR036422 RuBisCO large subunit, N-terminal domain superfamily AYJ59_11055 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily AYJ59_11055 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal AYJ59_11055 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site AYJ59_11055 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal AYJ59_11060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11060 IPR011704 ATPase, dynein-related, AAA domain AYJ59_11060 IPR013615 CbbQ/NirQ/NorQ, C-terminal AYJ59_11065 IPR002035 von Willebrand factor, type A AYJ59_11065 IPR036465 von Willebrand factor A-like domain superfamily AYJ59_11075 IPR036874 Carbonic anhydrase superfamily AYJ59_11075 IPR001765 Carbonic anhydrase AYJ59_11075 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AYJ59_11090 IPR004176 Clp, N-terminal AYJ59_11090 IPR003593 AAA+ ATPase domain AYJ59_11090 IPR003959 ATPase, AAA-type, core AYJ59_11090 IPR036628 Clp, N-terminal domain superfamily AYJ59_11090 IPR019489 Clp ATPase, C-terminal AYJ59_11090 IPR017730 Chaperonin ClpB AYJ59_11090 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11090 IPR001270 ClpA/B family AYJ59_11090 IPR018368 ClpA/B, conserved site 1 AYJ59_11090 IPR028299 ClpA/B, conserved site 2 AYJ59_11090 IPR041546 ClpA/ClpB, AAA lid domain AYJ59_11095 IPR035965 PAS domain superfamily AYJ59_11095 IPR000700 PAS-associated, C-terminal AYJ59_11095 IPR013656 PAS fold-4 AYJ59_11095 IPR029787 Nucleotide cyclase AYJ59_11095 IPR000160 GGDEF domain AYJ59_11095 IPR000014 PAS domain AYJ59_11105 IPR012349 FMN-binding split barrel AYJ59_11105 IPR002563 Flavin reductase like domain AYJ59_11115 IPR001353 Proteasome, subunit alpha/beta AYJ59_11115 IPR023333 Proteasome B-type subunit AYJ59_11115 IPR029055 Nucleophile aminohydrolases, N-terminal AYJ59_11115 IPR022281 ATP-dependent protease, HslV subunit AYJ59_11120 IPR011010 DNA breaking-rejoining enzyme, catalytic core AYJ59_11120 IPR013762 Integrase-like, catalytic domain superfamily AYJ59_11120 IPR023009 Tyrosine recombinase XerC/XerD AYJ59_11120 IPR010998 Integrase/recombinase, N-terminal AYJ59_11120 IPR004107 Integrase, SAM-like, N-terminal AYJ59_11120 IPR011931 Tyrosine recombinase XerC AYJ59_11120 IPR002104 Integrase, catalytic domain AYJ59_11125 IPR029787 Nucleotide cyclase AYJ59_11125 IPR000160 GGDEF domain AYJ59_11125 IPR013656 PAS fold-4 AYJ59_11125 IPR035965 PAS domain superfamily AYJ59_11125 IPR000700 PAS-associated, C-terminal AYJ59_11125 IPR000014 PAS domain AYJ59_11135 IPR002771 Multiple antibiotic resistance (MarC)-related AYJ59_11140 IPR001633 EAL domain AYJ59_11140 IPR000700 PAS-associated, C-terminal AYJ59_11140 IPR035919 EAL domain superfamily AYJ59_11140 IPR000160 GGDEF domain AYJ59_11140 IPR035965 PAS domain superfamily AYJ59_11140 IPR013656 PAS fold-4 AYJ59_11140 IPR013655 PAS fold-3 AYJ59_11140 IPR007895 MASE1 AYJ59_11140 IPR029787 Nucleotide cyclase AYJ59_11140 IPR000014 PAS domain AYJ59_11140 IPR001610 PAC motif AYJ59_11145 IPR001387 Cro/C1-type helix-turn-helix domain AYJ59_11145 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AYJ59_11145 IPR039418 LexA-like AYJ59_11145 IPR036286 LexA/Signal peptidase-like superfamily AYJ59_11145 IPR015927 Peptidase S24/S26A/S26B/S26C AYJ59_11155 IPR018510 Diaminopimelate epimerase, active site AYJ59_11155 IPR001653 Diaminopimelate epimerase, DapF AYJ59_11160 IPR003959 ATPase, AAA-type, core AYJ59_11160 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11160 IPR004491 Heat shock protein HslU AYJ59_11160 IPR019489 Clp ATPase, C-terminal AYJ59_11160 IPR003593 AAA+ ATPase domain AYJ59_11170 IPR023576 UbiE/COQ5 methyltransferase, conserved site AYJ59_11170 IPR004033 UbiE/COQ5 methyltransferase AYJ59_11170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_11180 IPR011009 Protein kinase-like domain superfamily AYJ59_11180 IPR004147 UbiB domain AYJ59_11180 IPR010232 Probable protein kinase UbiB AYJ59_11185 IPR026033 Azaguanine-like transporters AYJ59_11185 IPR006043 Xanthine/uracil/vitamin C permease AYJ59_11215 IPR012910 TonB-dependent receptor, plug domain AYJ59_11215 IPR010917 TonB-dependent receptor, conserved site AYJ59_11215 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_11215 IPR010916 TonB box, conserved site AYJ59_11215 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_11215 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_11215 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_11235 IPR012893 HipA-like, C-terminal AYJ59_11265 IPR004546 Restriction endonuclease, type I, HsdM AYJ59_11265 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AYJ59_11265 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AYJ59_11265 IPR003356 DNA methylase, adenine-specific AYJ59_11265 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_11265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_11270 IPR009057 Homeobox-like domain superfamily AYJ59_11270 IPR006120 Resolvase, HTH domain AYJ59_11270 IPR006118 Recombinase, conserved site AYJ59_11270 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily AYJ59_11270 IPR006119 Resolvase, N-terminal catalytic domain AYJ59_11305 IPR006073 GTP binding domain AYJ59_11305 IPR013029 YchF, C-terminal domain AYJ59_11305 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11305 IPR041706 YchF, N-terminal AYJ59_11305 IPR012675 Beta-grasp domain superfamily AYJ59_11305 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AYJ59_11305 IPR012676 TGS-like AYJ59_11305 IPR023192 TGS-like domain superfamily AYJ59_11305 IPR004095 TGS AYJ59_11305 IPR031167 OBG-type guanine nucleotide-binding (G) domain AYJ59_11310 IPR036416 Peptidyl-tRNA hydrolase superfamily AYJ59_11310 IPR001328 Peptidyl-tRNA hydrolase AYJ59_11310 IPR018171 Peptidyl-tRNA hydrolase, conserved site AYJ59_11315 IPR001021 Ribosomal protein L25, long-form AYJ59_11315 IPR037121 Ribosomal protein L25, C-terminal AYJ59_11315 IPR029751 Ribosomal protein L25 AYJ59_11315 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AYJ59_11315 IPR020057 Ribosomal protein L25, beta domain AYJ59_11315 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AYJ59_11320 IPR000836 Phosphoribosyltransferase domain AYJ59_11320 IPR029057 Phosphoribosyltransferase-like AYJ59_11320 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AYJ59_11320 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AYJ59_11320 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AYJ59_11320 IPR005946 Ribose-phosphate pyrophosphokinase AYJ59_11335 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AYJ59_11335 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AYJ59_11335 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AYJ59_11335 IPR036291 NAD(P)-binding domain superfamily AYJ59_11335 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AYJ59_11335 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AYJ59_11335 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AYJ59_11340 IPR000352 Peptide chain release factor class I AYJ59_11340 IPR004373 Peptide chain release factor 1 AYJ59_11340 IPR005139 Peptide chain release factor AYJ59_11345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_11345 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AYJ59_11345 IPR025714 Methyltransferase domain AYJ59_11345 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AYJ59_11345 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AYJ59_11345 IPR004556 Methyltransferase HemK-like AYJ59_11350 IPR035985 Ubiquitin-activating enzyme AYJ59_11350 IPR000594 THIF-type NAD/FAD binding fold AYJ59_11350 IPR012730 Molybdopterin synthase sulfurylase MoeB AYJ59_11355 IPR025713 Motility protein B, N-terminal domain AYJ59_11355 IPR006665 OmpA-like domain AYJ59_11355 IPR036737 OmpA-like domain superfamily AYJ59_11360 IPR022522 Flagellar motor stator, MotA AYJ59_11360 IPR000540 Flagellar motor protein MotA, conserved site AYJ59_11360 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_11365 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AYJ59_11365 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AYJ59_11365 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AYJ59_11365 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AYJ59_11365 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AYJ59_11365 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AYJ59_11365 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AYJ59_11370 IPR036163 Heavy metal-associated domain superfamily AYJ59_11370 IPR006122 Heavy metal-associated domain, copper ion-binding AYJ59_11370 IPR017969 Heavy-metal-associated, conserved site AYJ59_11370 IPR000428 Copper ion binding protein AYJ59_11370 IPR006121 Heavy metal-associated domain, HMA AYJ59_11390 IPR000700 PAS-associated, C-terminal AYJ59_11390 IPR000160 GGDEF domain AYJ59_11390 IPR029787 Nucleotide cyclase AYJ59_11390 IPR000014 PAS domain AYJ59_11390 IPR035965 PAS domain superfamily AYJ59_11390 IPR013656 PAS fold-4 AYJ59_11395 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AYJ59_11395 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AYJ59_11395 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AYJ59_11395 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_11395 IPR002288 DNA gyrase B subunit, C-terminal AYJ59_11395 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AYJ59_11395 IPR001241 DNA topoisomerase, type IIA AYJ59_11395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_11395 IPR006171 TOPRIM domain AYJ59_11395 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_11395 IPR018522 DNA topoisomerase, type IIA, conserved site AYJ59_11395 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_11400 IPR012349 FMN-binding split barrel AYJ59_11400 IPR000659 Pyridoxamine 5'-phosphate oxidase AYJ59_11400 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AYJ59_11400 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AYJ59_11400 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AYJ59_11405 IPR036895 Uracil-DNA glycosylase-like domain superfamily AYJ59_11405 IPR005122 Uracil-DNA glycosylase-like AYJ59_11405 IPR002043 Uracil-DNA glycosylase family 1 AYJ59_11405 IPR018085 Uracil-DNA glycosylase, active site AYJ59_11420 IPR000540 Flagellar motor protein MotA, conserved site AYJ59_11420 IPR002898 MotA/TolQ/ExbB proton channel AYJ59_11430 IPR023214 HAD superfamily AYJ59_11430 IPR006543 Histidinol-phosphate phosphatase AYJ59_11430 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AYJ59_11430 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AYJ59_11430 IPR036412 HAD-like superfamily AYJ59_11435 IPR015944 Glycine-tRNA ligase, beta subunit AYJ59_11435 IPR006194 Glycine-tRNA synthetase, heterodimeric AYJ59_11435 IPR008909 DALR anticodon binding AYJ59_11440 IPR002310 Glycine-tRNA ligase, alpha subunit AYJ59_11440 IPR006194 Glycine-tRNA synthetase, heterodimeric AYJ59_11445 IPR036868 TusA-like domain superfamily AYJ59_11445 IPR001455 TusA-like domain AYJ59_11450 IPR011055 Duplicated hybrid motif AYJ59_11450 IPR007340 Opacity-associated protein A AYJ59_11450 IPR016047 Peptidase M23 AYJ59_11455 IPR005338 Anhydro-N-acetylmuramic acid kinase AYJ59_11460 IPR036969 Citrate synthase superfamily AYJ59_11460 IPR016142 Citrate synthase-like, large alpha subdomain AYJ59_11460 IPR024176 Citrate synthase, bacterial-type AYJ59_11460 IPR002020 Citrate synthase AYJ59_11460 IPR019810 Citrate synthase active site AYJ59_11460 IPR016143 Citrate synthase-like, small alpha subdomain AYJ59_11460 IPR011278 2-methylcitrate synthase/citrate synthase type I AYJ59_11465 IPR000361 FeS cluster biogenesis AYJ59_11465 IPR016092 FeS cluster insertion protein AYJ59_11465 IPR017870 FeS cluster insertion, C-terminal, conserved site AYJ59_11465 IPR023063 FeS cluster insertion protein ErpA AYJ59_11465 IPR035903 HesB-like domain superfamily AYJ59_11470 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AYJ59_11470 IPR036291 NAD(P)-binding domain superfamily AYJ59_11470 IPR000534 Semialdehyde dehydrogenase, NAD-binding AYJ59_11470 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AYJ59_11470 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AYJ59_11475 IPR001844 Chaperonin Cpn60 AYJ59_11475 IPR027413 GroEL-like equatorial domain superfamily AYJ59_11475 IPR027409 GroEL-like apical domain superfamily AYJ59_11475 IPR002423 Chaperonin Cpn60/TCP-1 family AYJ59_11475 IPR018370 Chaperonin Cpn60, conserved site AYJ59_11475 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AYJ59_11480 IPR020818 GroES chaperonin family AYJ59_11480 IPR018369 Chaperonin GroES, conserved site AYJ59_11480 IPR011032 GroES-like superfamily AYJ59_11480 IPR037124 GroES chaperonin superfamily AYJ59_11485 IPR011529 Glutamate 5-kinase AYJ59_11485 IPR036974 PUA domain superfamily AYJ59_11485 IPR015947 PUA-like superfamily AYJ59_11485 IPR002478 PUA domain AYJ59_11485 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AYJ59_11485 IPR036393 Acetylglutamate kinase-like superfamily AYJ59_11485 IPR001048 Aspartate/glutamate/uridylate kinase AYJ59_11485 IPR041739 Glutamate-5-kinase domain AYJ59_11485 IPR001057 Glutamate/acetylglutamate kinase AYJ59_11485 IPR019797 Glutamate 5-kinase, conserved site AYJ59_11490 IPR031167 OBG-type guanine nucleotide-binding (G) domain AYJ59_11490 IPR035101 GTP-binding protein, Obg-type AYJ59_11490 IPR014100 GTP-binding protein Obg/CgtA AYJ59_11490 IPR006074 GTP1/OBG, conserved site AYJ59_11490 IPR006169 GTP1/OBG domain AYJ59_11490 IPR036726 GTP1/OBG domain superfamily AYJ59_11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11490 IPR006073 GTP binding domain AYJ59_11495 IPR018261 Ribosomal protein L27, conserved site AYJ59_11495 IPR001684 Ribosomal protein L27 AYJ59_11500 IPR001787 Ribosomal protein L21 AYJ59_11500 IPR028909 Ribosomal protein L21-like AYJ59_11500 IPR036164 L21-like superfamily AYJ59_11505 IPR000092 Polyprenyl synthetase AYJ59_11505 IPR008949 Isoprenoid synthase domain superfamily AYJ59_11505 IPR033749 Polyprenyl synthetase, conserved site AYJ59_11545 IPR013762 Integrase-like, catalytic domain superfamily AYJ59_11545 IPR004107 Integrase, SAM-like, N-terminal AYJ59_11545 IPR010998 Integrase/recombinase, N-terminal AYJ59_11545 IPR011010 DNA breaking-rejoining enzyme, catalytic core AYJ59_11545 IPR002104 Integrase, catalytic domain AYJ59_11550 IPR011344 Single-stranded DNA-binding protein AYJ59_11550 IPR012340 Nucleic acid-binding, OB-fold AYJ59_11550 IPR000424 Primosome PriB/single-strand DNA-binding AYJ59_11555 IPR020846 Major facilitator superfamily domain AYJ59_11555 IPR036259 MFS transporter superfamily AYJ59_11555 IPR011701 Major facilitator superfamily AYJ59_11565 IPR041102 UvrA, interaction domain AYJ59_11565 IPR003439 ABC transporter-like AYJ59_11565 IPR017871 ABC transporter, conserved site AYJ59_11565 IPR004602 UvrABC system subunit A AYJ59_11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11565 IPR041552 UvrA DNA-binding domain AYJ59_11575 IPR000594 THIF-type NAD/FAD binding fold AYJ59_11575 IPR035985 Ubiquitin-activating enzyme AYJ59_11585 IPR036373 Ribosomal protein L17 superfamily AYJ59_11585 IPR000456 Ribosomal protein L17 AYJ59_11590 IPR011262 DNA-directed RNA polymerase, insert domain AYJ59_11590 IPR011773 DNA-directed RNA polymerase, alpha subunit AYJ59_11590 IPR036603 RNA polymerase, RBP11-like subunit AYJ59_11590 IPR011260 RNA polymerase, alpha subunit, C-terminal AYJ59_11590 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AYJ59_11590 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AYJ59_11595 IPR018079 Ribosomal protein S4, conserved site AYJ59_11595 IPR005709 Ribosomal protein S4, bacterial-type AYJ59_11595 IPR036986 RNA-binding S4 domain superfamily AYJ59_11595 IPR001912 Ribosomal protein S4/S9, N-terminal AYJ59_11595 IPR022801 Ribosomal protein S4/S9 AYJ59_11595 IPR002942 RNA-binding S4 domain AYJ59_11600 IPR036967 Ribosomal protein S11 superfamily AYJ59_11600 IPR001971 Ribosomal protein S11 AYJ59_11600 IPR019981 Ribosomal protein S11, bacterial-type AYJ59_11600 IPR018102 Ribosomal S11, conserved site AYJ59_11605 IPR010979 Ribosomal protein S13-like, H2TH AYJ59_11605 IPR019980 Ribosomal protein S13, bacterial-type AYJ59_11605 IPR001892 Ribosomal protein S13 AYJ59_11605 IPR027437 30s ribosomal protein S13, C-terminal AYJ59_11605 IPR018269 Ribosomal protein S13, conserved site AYJ59_11610 IPR023201 SecY domain superfamily AYJ59_11610 IPR002208 SecY/SEC61-alpha family AYJ59_11610 IPR030659 SecY conserved site AYJ59_11610 IPR026593 Protein translocase subunit SecY AYJ59_11615 IPR030878 Ribosomal protein L15 AYJ59_11615 IPR005749 Ribosomal protein L15, bacterial-type AYJ59_11615 IPR036227 Ribosomal L18e/L15P superfamily AYJ59_11615 IPR021131 Ribosomal protein L18e/L15P AYJ59_11620 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AYJ59_11620 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AYJ59_11620 IPR005996 Ribosomal protein L30, bacterial-type AYJ59_11625 IPR005324 Ribosomal protein S5, C-terminal AYJ59_11625 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_11625 IPR013810 Ribosomal protein S5, N-terminal AYJ59_11625 IPR018192 Ribosomal protein S5, N-terminal, conserved site AYJ59_11625 IPR005712 Ribosomal protein S5, bacterial-type AYJ59_11625 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_11625 IPR000851 Ribosomal protein S5 AYJ59_11630 IPR004389 Ribosomal protein L18, bacterial-type AYJ59_11630 IPR005484 Ribosomal protein L18 AYJ59_11635 IPR019906 Ribosomal protein L6, bacterial-type AYJ59_11635 IPR000702 Ribosomal protein L6 AYJ59_11635 IPR020040 Ribosomal protein L6, alpha-beta domain AYJ59_11635 IPR002358 Ribosomal protein L6, conserved site AYJ59_11635 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AYJ59_11640 IPR035987 Ribosomal protein S8 superfamily AYJ59_11640 IPR000630 Ribosomal protein S8 AYJ59_11645 IPR023036 Ribosomal protein S14, bacterial/plastid AYJ59_11645 IPR018271 Ribosomal protein S14, conserved site AYJ59_11645 IPR001209 Ribosomal protein S14 AYJ59_11650 IPR031309 Ribosomal protein L5, C-terminal AYJ59_11650 IPR020929 Ribosomal protein L5, conserved site AYJ59_11650 IPR020930 Ribosomal protein L5, bacterial-type AYJ59_11650 IPR002132 Ribosomal protein L5 AYJ59_11650 IPR022803 Ribosomal protein L5 domain superfamily AYJ59_11650 IPR031310 Ribosomal protein L5, N-terminal AYJ59_11655 IPR005824 KOW AYJ59_11655 IPR041988 Ribosomal Protein L26/L24, KOW domain AYJ59_11655 IPR008991 Translation protein SH3-like domain superfamily AYJ59_11655 IPR014722 Ribosomal protein L2, domain 2 AYJ59_11655 IPR003256 Ribosomal protein L24 AYJ59_11655 IPR005825 Ribosomal protein L24/L26, conserved site AYJ59_11660 IPR019972 Ribosomal protein L14P, conserved site AYJ59_11660 IPR005745 Ribosomal protein L14P, bacterial-type AYJ59_11660 IPR036853 Ribosomal protein L14 superfamily AYJ59_11660 IPR000218 Ribosomal protein L14P AYJ59_11665 IPR019984 30S ribosomal protein S17 AYJ59_11665 IPR012340 Nucleic acid-binding, OB-fold AYJ59_11665 IPR000266 Ribosomal protein S17/S11 AYJ59_11670 IPR018254 Ribosomal protein L29, conserved site AYJ59_11670 IPR036049 Ribosomal protein L29/L35 superfamily AYJ59_11670 IPR001854 Ribosomal protein L29/L35 AYJ59_11675 IPR020798 Ribosomal protein L16, conserved site AYJ59_11675 IPR036920 Ribosomal protein L10e/L16 superfamily AYJ59_11675 IPR000114 Ribosomal protein L16 AYJ59_11675 IPR016180 Ribosomal protein L10e/L16 AYJ59_11680 IPR018280 Ribosomal protein S3, conserved site AYJ59_11680 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AYJ59_11680 IPR001351 Ribosomal protein S3, C-terminal AYJ59_11680 IPR005704 Ribosomal protein S3, bacterial-type AYJ59_11680 IPR015946 K homology domain-like, alpha/beta AYJ59_11680 IPR009019 K homology domain superfamily, prokaryotic type AYJ59_11680 IPR004044 K Homology domain, type 2 AYJ59_11680 IPR004087 K Homology domain AYJ59_11685 IPR001063 Ribosomal protein L22/L17 AYJ59_11685 IPR018260 Ribosomal protein L22/L17, conserved site AYJ59_11685 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AYJ59_11685 IPR036394 Ribosomal protein L22/L17 superfamily AYJ59_11690 IPR002222 Ribosomal protein S19/S15 AYJ59_11690 IPR023575 Ribosomal protein S19, superfamily AYJ59_11690 IPR020934 Ribosomal protein S19 conserved site AYJ59_11690 IPR005732 Ribosomal protein S19, bacterial-type AYJ59_11695 IPR008991 Translation protein SH3-like domain superfamily AYJ59_11695 IPR022669 Ribosomal protein L2, C-terminal AYJ59_11695 IPR005880 Ribosomal protein L2, bacterial/organellar-type AYJ59_11695 IPR002171 Ribosomal protein L2 AYJ59_11695 IPR022671 Ribosomal protein L2, conserved site AYJ59_11695 IPR012340 Nucleic acid-binding, OB-fold AYJ59_11695 IPR014726 Ribosomal protein L2, domain 3 AYJ59_11695 IPR014722 Ribosomal protein L2, domain 2 AYJ59_11695 IPR022666 Ribosomal Proteins L2, RNA binding domain AYJ59_11700 IPR012678 Ribosomal protein L23/L15e core domain superfamily AYJ59_11700 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AYJ59_11700 IPR013025 Ribosomal protein L25/L23 AYJ59_11700 IPR001014 Ribosomal protein L23/L25, conserved site AYJ59_11705 IPR002136 Ribosomal protein L4/L1e AYJ59_11705 IPR023574 Ribosomal protein L4 domain superfamily AYJ59_11705 IPR013005 50S ribosomal protein uL4 AYJ59_11710 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_11710 IPR019926 Ribosomal protein L3, conserved site AYJ59_11710 IPR019927 Ribosomal protein L3, bacterial/organelle-type AYJ59_11710 IPR000597 Ribosomal protein L3 AYJ59_11715 IPR001848 Ribosomal protein S10 AYJ59_11715 IPR027486 Ribosomal protein S10 domain AYJ59_11715 IPR018268 Ribosomal protein S10, conserved site AYJ59_11715 IPR036838 Ribosomal protein S10 domain superfamily AYJ59_11720 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AYJ59_11720 IPR031157 Tr-type G domain, conserved site AYJ59_11720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11720 IPR005225 Small GTP-binding protein domain AYJ59_11720 IPR033720 Elongation factor Tu, domain 2 AYJ59_11720 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_11720 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ59_11720 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AYJ59_11720 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AYJ59_11720 IPR004161 Translation elongation factor EFTu-like, domain 2 AYJ59_11720 IPR000795 Transcription factor, GTP-binding domain AYJ59_11725 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_11725 IPR009022 Elongation factor G, domain III AYJ59_11725 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_11725 IPR041095 Elongation Factor G, domain II AYJ59_11725 IPR031157 Tr-type G domain, conserved site AYJ59_11725 IPR005517 Translation elongation factor EFG/EF2, domain IV AYJ59_11725 IPR000640 Elongation factor EFG, domain V-like AYJ59_11725 IPR035647 EF-G domain III/V-like AYJ59_11725 IPR035649 EFG, domain V AYJ59_11725 IPR000795 Transcription factor, GTP-binding domain AYJ59_11725 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_11725 IPR004540 Translation elongation factor EFG/EF2 AYJ59_11725 IPR005225 Small GTP-binding protein domain AYJ59_11725 IPR004161 Translation elongation factor EFTu-like, domain 2 AYJ59_11730 IPR000235 Ribosomal protein S5/S7 AYJ59_11730 IPR005717 Ribosomal protein S7, bacterial/organellar-type AYJ59_11730 IPR036823 Ribosomal protein S7 domain superfamily AYJ59_11730 IPR023798 Ribosomal protein S7 domain AYJ59_11730 IPR020606 Ribosomal protein S7, conserved site AYJ59_11735 IPR005679 Ribosomal protein S12, bacterial-type AYJ59_11735 IPR006032 Ribosomal protein S12/S23 AYJ59_11735 IPR012340 Nucleic acid-binding, OB-fold AYJ59_11740 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AYJ59_11740 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AYJ59_11740 IPR000722 RNA polymerase, alpha subunit AYJ59_11740 IPR006592 RNA polymerase, N-terminal AYJ59_11740 IPR007080 RNA polymerase Rpb1, domain 1 AYJ59_11740 IPR007066 RNA polymerase Rpb1, domain 3 AYJ59_11740 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AYJ59_11740 IPR007081 RNA polymerase Rpb1, domain 5 AYJ59_11740 IPR007083 RNA polymerase Rpb1, domain 4 AYJ59_11745 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AYJ59_11745 IPR014724 RNA polymerase Rpb2, OB-fold AYJ59_11745 IPR007645 RNA polymerase Rpb2, domain 3 AYJ59_11745 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AYJ59_11745 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AYJ59_11745 IPR007121 RNA polymerase, beta subunit, conserved site AYJ59_11745 IPR007644 RNA polymerase, beta subunit, protrusion AYJ59_11745 IPR007642 RNA polymerase Rpb2, domain 2 AYJ59_11745 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AYJ59_11745 IPR015712 DNA-directed RNA polymerase, subunit 2 AYJ59_11745 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AYJ59_11745 IPR007641 RNA polymerase Rpb2, domain 7 AYJ59_11750 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AYJ59_11750 IPR013823 Ribosomal protein L7/L12, C-terminal AYJ59_11750 IPR008932 Ribosomal protein L7/L12, oligomerisation AYJ59_11750 IPR000206 Ribosomal protein L7/L12 AYJ59_11750 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AYJ59_11755 IPR002363 Ribosomal protein L10, eubacterial, conserved site AYJ59_11755 IPR001790 Ribosomal protein L10P AYJ59_11755 IPR022973 Ribosomal protein L10 AYJ59_11760 IPR023673 Ribosomal protein L1, conserved site AYJ59_11760 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AYJ59_11760 IPR002143 Ribosomal protein L1 AYJ59_11760 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AYJ59_11760 IPR023674 Ribosomal protein L1-like AYJ59_11760 IPR005878 Ribosomal protein L1, bacterial-type AYJ59_11765 IPR006519 Ribosomal protein L11, bacterial-type AYJ59_11765 IPR020785 Ribosomal protein L11, conserved site AYJ59_11765 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AYJ59_11765 IPR020783 Ribosomal protein L11, C-terminal AYJ59_11765 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AYJ59_11765 IPR000911 Ribosomal protein L11/L12 AYJ59_11765 IPR020784 Ribosomal protein L11, N-terminal AYJ59_11770 IPR001062 Transcription antitermination protein, NusG AYJ59_11770 IPR005824 KOW AYJ59_11770 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AYJ59_11770 IPR008991 Translation protein SH3-like domain superfamily AYJ59_11770 IPR014722 Ribosomal protein L2, domain 2 AYJ59_11770 IPR036735 NusG, N-terminal domain superfamily AYJ59_11770 IPR006645 NusG, N-terminal AYJ59_11775 IPR005807 SecE subunit of protein translocation complex, bacterial-like AYJ59_11775 IPR038379 SecE superfamily AYJ59_11775 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AYJ59_11785 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AYJ59_11785 IPR031157 Tr-type G domain, conserved site AYJ59_11785 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11785 IPR005225 Small GTP-binding protein domain AYJ59_11785 IPR000795 Transcription factor, GTP-binding domain AYJ59_11785 IPR009000 Translation protein, beta-barrel domain superfamily AYJ59_11785 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AYJ59_11785 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AYJ59_11785 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AYJ59_11785 IPR004161 Translation elongation factor EFTu-like, domain 2 AYJ59_11785 IPR033720 Elongation factor Tu, domain 2 AYJ59_11815 IPR006145 Pseudouridine synthase, RsuA/RluA AYJ59_11815 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AYJ59_11815 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_11820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_11820 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AYJ59_11820 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_11820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_11820 IPR005814 Aminotransferase class-III AYJ59_11830 IPR036102 OsmC/Ohr superfamily AYJ59_11830 IPR003718 OsmC/Ohr family AYJ59_11830 IPR015946 K homology domain-like, alpha/beta AYJ59_11835 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AYJ59_11835 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AYJ59_11835 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AYJ59_11835 IPR000183 Ornithine/DAP/Arg decarboxylase AYJ59_11835 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AYJ59_11835 IPR029066 PLP-binding barrel AYJ59_11835 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AYJ59_11835 IPR002433 Ornithine decarboxylase AYJ59_11840 IPR037163 Spermidine synthase, tetramerisation domain superfamily AYJ59_11840 IPR030374 Polyamine biosynthesis domain AYJ59_11840 IPR035246 Spermidine synthase, tetramerisation domain AYJ59_11840 IPR030373 Polyamine biosynthesis domain, conserved site AYJ59_11840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_11840 IPR001045 Spermidine/spermine synthases AYJ59_11845 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AYJ59_11845 IPR017716 S-adenosylmethionine decarboxylase proenzyme AYJ59_11845 IPR016067 S-adenosylmethionine decarboxylase, core AYJ59_11850 IPR011060 Ribulose-phosphate binding barrel AYJ59_11850 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AYJ59_11850 IPR013785 Aldolase-type TIM barrel AYJ59_11850 IPR013798 Indole-3-glycerol phosphate synthase AYJ59_11855 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AYJ59_11855 IPR017459 Glycosyl transferase family 3, N-terminal domain AYJ59_11855 IPR005940 Anthranilate phosphoribosyl transferase AYJ59_11855 IPR000312 Glycosyl transferase, family 3 AYJ59_11855 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AYJ59_11860 IPR017926 Glutamine amidotransferase AYJ59_11860 IPR029062 Class I glutamine amidotransferase-like AYJ59_11860 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AYJ59_11865 IPR006805 Anthranilate synthase component I, N-terminal AYJ59_11865 IPR005256 Anthranilate synthase component I, PabB-like AYJ59_11865 IPR005801 ADC synthase AYJ59_11865 IPR015890 Chorismate-utilising enzyme, C-terminal AYJ59_11865 IPR019999 Anthranilate synthase component I-like AYJ59_11870 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AYJ59_11870 IPR023214 HAD superfamily AYJ59_11870 IPR041492 Haloacid dehalogenase-like hydrolase AYJ59_11870 IPR006439 HAD hydrolase, subfamily IA AYJ59_11870 IPR036412 HAD-like superfamily AYJ59_11870 IPR037512 Phosphoglycolate phosphatase, prokaryotic AYJ59_11870 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AYJ59_11875 IPR011060 Ribulose-phosphate binding barrel AYJ59_11875 IPR013785 Aldolase-type TIM barrel AYJ59_11875 IPR000056 Ribulose-phosphate 3-epimerase-like AYJ59_11875 IPR026019 Ribulose-phosphate 3-epimerase AYJ59_11885 IPR018236 SAICAR synthetase, conserved site AYJ59_11885 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase AYJ59_11885 IPR028923 SAICAR synthetase/ADE2, N-terminal AYJ59_11890 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_11890 IPR004472 Dethiobiotin synthase BioD AYJ59_11900 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype AYJ59_11900 IPR000771 Fructose-bisphosphate aldolase, class-II AYJ59_11900 IPR013785 Aldolase-type TIM barrel AYJ59_11905 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AYJ59_11905 IPR015806 Pyruvate kinase, insert domain superfamily AYJ59_11905 IPR036918 Pyruvate kinase, C-terminal domain superfamily AYJ59_11905 IPR040442 Pyruvate kinase-like domain superfamily AYJ59_11905 IPR015795 Pyruvate kinase, C-terminal AYJ59_11905 IPR018209 Pyruvate kinase, active site AYJ59_11905 IPR011037 Pyruvate kinase-like, insert domain superfamily AYJ59_11905 IPR001697 Pyruvate kinase AYJ59_11905 IPR015793 Pyruvate kinase, barrel AYJ59_11910 IPR036043 Phosphoglycerate kinase superfamily AYJ59_11910 IPR015824 Phosphoglycerate kinase, N-terminal AYJ59_11910 IPR001576 Phosphoglycerate kinase AYJ59_11910 IPR015911 Phosphoglycerate kinase, conserved site AYJ59_11915 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AYJ59_11915 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AYJ59_11915 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AYJ59_11915 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AYJ59_11915 IPR036291 NAD(P)-binding domain superfamily AYJ59_11915 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AYJ59_11920 IPR005478 Transketolase, bacterial-like AYJ59_11920 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AYJ59_11920 IPR029061 Thiamin diphosphate-binding fold AYJ59_11920 IPR020826 Transketolase binding site AYJ59_11920 IPR033248 Transketolase, C-terminal domain AYJ59_11920 IPR033247 Transketolase family AYJ59_11920 IPR005474 Transketolase, N-terminal AYJ59_11920 IPR005475 Transketolase-like, pyrimidine-binding domain AYJ59_11930 IPR001036 Acriflavin resistance protein AYJ59_11930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AYJ59_11945 IPR002524 Cation efflux protein AYJ59_11945 IPR027470 Cation efflux protein, cytoplasmic domain AYJ59_11945 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AYJ59_11945 IPR023783 Cation efflux pump FieF AYJ59_11945 IPR027469 Cation efflux transmembrane domain superfamily AYJ59_11950 IPR012006 tRNA nucleotidyltransferase, proteobacteria AYJ59_11950 IPR003607 HD/PDEase domain AYJ59_11950 IPR006674 HD domain AYJ59_11950 IPR002646 Poly A polymerase, head domain AYJ59_11950 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AYJ59_11960 IPR038068 YcgL-like superfamily AYJ59_11960 IPR027354 YcgL domain AYJ59_11965 IPR019831 Manganese/iron superoxide dismutase, N-terminal AYJ59_11965 IPR019833 Manganese/iron superoxide dismutase, binding site AYJ59_11965 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AYJ59_11965 IPR001189 Manganese/iron superoxide dismutase AYJ59_11965 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AYJ59_11965 IPR019832 Manganese/iron superoxide dismutase, C-terminal AYJ59_11970 IPR004090 Chemotaxis methyl-accepting receptor AYJ59_11970 IPR000727 Target SNARE coiled-coil homology domain AYJ59_11970 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AYJ59_11970 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AYJ59_11970 IPR003660 HAMP domain AYJ59_11995 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_11995 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AYJ59_11995 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AYJ59_11995 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AYJ59_11995 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AYJ59_11995 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AYJ59_11995 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AYJ59_12020 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AYJ59_12020 IPR012938 Glucose/Sorbosone dehydrogenase AYJ59_12020 IPR011042 Six-bladed beta-propeller, TolB-like AYJ59_12025 IPR032816 SNARE associated Golgi protein AYJ59_12045 IPR016161 Aldehyde/histidinol dehydrogenase AYJ59_12045 IPR015590 Aldehyde dehydrogenase domain AYJ59_12045 IPR016162 Aldehyde dehydrogenase, N-terminal AYJ59_12045 IPR016163 Aldehyde dehydrogenase, C-terminal AYJ59_12050 IPR000587 Creatinase, N-terminal AYJ59_12050 IPR036005 Creatinase/aminopeptidase-like AYJ59_12050 IPR000994 Peptidase M24 AYJ59_12050 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AYJ59_12050 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AYJ59_12055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AYJ59_12055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AYJ59_12055 IPR012773 Ectoine biosynthetic protein AYJ59_12055 IPR005814 Aminotransferase class-III AYJ59_12055 IPR004637 2,4-diaminobutyrate 4-transaminase AYJ59_12055 IPR015424 Pyridoxal phosphate-dependent transferase AYJ59_12060 IPR011650 Peptidase M20, dimerisation domain AYJ59_12060 IPR002933 Peptidase M20 AYJ59_12060 IPR036264 Bacterial exopeptidase dimerisation domain AYJ59_12060 IPR017439 Amidohydrolase AYJ59_12070 IPR026660 Phosphoribosyl-AMP cyclohydrolase AYJ59_12070 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AYJ59_12070 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AYJ59_12075 IPR020103 Pseudouridine synthase, catalytic domain superfamily AYJ59_12075 IPR001656 Pseudouridine synthase, TruD AYJ59_12075 IPR011760 Pseudouridine synthase, TruD, insertion domain AYJ59_12075 IPR042214 Pseudouridine synthase, TruD, catalytic domain AYJ59_12090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12090 IPR007848 Methyltransferase small domain AYJ59_12095 IPR014016 UvrD-like helicase, ATP-binding domain AYJ59_12095 IPR034739 UvrD/AddA helicase, N-terminal AYJ59_12095 IPR005752 ATP-dependent DNA helicase Rep AYJ59_12095 IPR013986 DExx box DNA helicase domain superfamily AYJ59_12095 IPR000212 DNA helicase, UvrD/REP type AYJ59_12095 IPR014017 UvrD-like DNA helicase, C-terminal AYJ59_12095 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12100 IPR039697 Iron-type alcohol dehydrogenase-like AYJ59_12100 IPR018211 Alcohol dehydrogenase, iron-type, conserved site AYJ59_12100 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA AYJ59_12105 IPR006690 Outer membrane protein, OmpA-like, conserved site AYJ59_12105 IPR006664 Outer membrane protein, bacterial AYJ59_12105 IPR006665 OmpA-like domain AYJ59_12105 IPR036737 OmpA-like domain superfamily AYJ59_12115 IPR000160 GGDEF domain AYJ59_12115 IPR013702 FIST domain, N-terminal AYJ59_12115 IPR019494 FIST, C-domain AYJ59_12115 IPR035919 EAL domain superfamily AYJ59_12115 IPR001633 EAL domain AYJ59_12115 IPR029787 Nucleotide cyclase AYJ59_12120 IPR017871 ABC transporter, conserved site AYJ59_12120 IPR010132 ATPase, type I secretion system, HlyB AYJ59_12120 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12120 IPR003593 AAA+ ATPase domain AYJ59_12120 IPR039395 Peptidase C39-like A AYJ59_12120 IPR039421 Type I protein exporter AYJ59_12120 IPR005074 Peptidase C39, bacteriocin processing AYJ59_12120 IPR036640 ABC transporter type 1, transmembrane domain superfamily AYJ59_12120 IPR003439 ABC transporter-like AYJ59_12120 IPR011527 ABC transporter type 1, transmembrane domain AYJ59_12130 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_12130 IPR000792 Transcription regulator LuxR, C-terminal AYJ59_12130 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12130 IPR016032 Signal transduction response regulator, C-terminal effector AYJ59_12130 IPR011006 CheY-like superfamily AYJ59_12145 IPR003593 AAA+ ATPase domain AYJ59_12145 IPR001208 MCM domain AYJ59_12145 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AYJ59_12145 IPR004482 Mg chelatase-related protein AYJ59_12145 IPR025158 Mg chelatase-related protein, C-terminal domain AYJ59_12145 IPR000523 Magnesium chelatase ChlI domain AYJ59_12145 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12145 IPR020568 Ribosomal protein S5 domain 2-type fold AYJ59_12155 IPR012337 Ribonuclease H-like superfamily AYJ59_12155 IPR036397 Ribonuclease H superfamily AYJ59_12155 IPR001584 Integrase, catalytic core AYJ59_12170 IPR001525 C-5 cytosine methyltransferase AYJ59_12170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12205 IPR007475 Ubiquinone biosynthesis accessory factor UbiK AYJ59_12210 IPR000160 GGDEF domain AYJ59_12210 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12210 IPR011006 CheY-like superfamily AYJ59_12210 IPR029787 Nucleotide cyclase AYJ59_12220 IPR005148 Arginyl tRNA synthetase N-terminal domain AYJ59_12220 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AYJ59_12220 IPR001278 Arginine-tRNA ligase AYJ59_12220 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AYJ59_12220 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AYJ59_12220 IPR008909 DALR anticodon binding AYJ59_12220 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AYJ59_12225 IPR025589 Topoisomerase C-terminal repeat AYJ59_12225 IPR028612 DNA topoisomerase I, type IA AYJ59_12225 IPR005733 DNA topoisomerase I, bacterial-type AYJ59_12225 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AYJ59_12225 IPR023405 DNA topoisomerase, type IA, core domain AYJ59_12225 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AYJ59_12225 IPR000380 DNA topoisomerase, type IA AYJ59_12225 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AYJ59_12225 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AYJ59_12225 IPR013497 DNA topoisomerase, type IA, central AYJ59_12225 IPR003601 DNA topoisomerase, type IA, domain 2 AYJ59_12225 IPR023406 DNA topoisomerase, type IA, active site AYJ59_12225 IPR006171 TOPRIM domain AYJ59_12225 IPR034149 DNA topoisomerase 1, TOPRIM domain AYJ59_12230 IPR011006 CheY-like superfamily AYJ59_12230 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12235 IPR041614 DprA, winged helix domain AYJ59_12235 IPR036388 Winged helix-like DNA-binding domain superfamily AYJ59_12235 IPR003488 DNA recombination-mediator protein A AYJ59_12240 IPR036821 Peptide deformylase superfamily AYJ59_12240 IPR023635 Peptide deformylase AYJ59_12245 IPR005794 Methionyl-tRNA formyltransferase AYJ59_12245 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AYJ59_12245 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AYJ59_12245 IPR036477 Formyl transferase, N-terminal domain superfamily AYJ59_12245 IPR002376 Formyl transferase, N-terminal AYJ59_12245 IPR037022 Formyl transferase, C-terminal domain superfamily AYJ59_12245 IPR005793 Formyl transferase, C-terminal AYJ59_12245 IPR011034 Formyl transferase-like, C-terminal domain superfamily AYJ59_12250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12250 IPR023267 RNA (C5-cytosine) methyltransferase AYJ59_12250 IPR006027 NusB/RsmB/TIM44 AYJ59_12250 IPR035926 NusB-like superfamily AYJ59_12250 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AYJ59_12250 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AYJ59_12250 IPR004573 rRNA small subunit methyltransferase B AYJ59_12260 IPR013767 PAS fold AYJ59_12260 IPR003660 HAMP domain AYJ59_12260 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_12260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_12260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_12260 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AYJ59_12260 IPR035965 PAS domain superfamily AYJ59_12260 IPR000014 PAS domain AYJ59_12260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_12260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_12260 IPR005467 Histidine kinase domain AYJ59_12265 IPR003593 AAA+ ATPase domain AYJ59_12265 IPR002197 DNA binding HTH domain, Fis-type AYJ59_12265 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12265 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12265 IPR002078 RNA polymerase sigma factor 54 interaction domain AYJ59_12265 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AYJ59_12265 IPR025944 Sigma-54 interaction domain, conserved site AYJ59_12265 IPR009057 Homeobox-like domain superfamily AYJ59_12265 IPR011006 CheY-like superfamily AYJ59_12270 IPR036291 NAD(P)-binding domain superfamily AYJ59_12270 IPR003148 Regulator of K+ conductance, N-terminal AYJ59_12270 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AYJ59_12270 IPR006037 Regulator of K+ conductance, C-terminal AYJ59_12270 IPR006036 Potassium uptake protein TrkA AYJ59_12275 IPR004772 TrkH potassium transport family AYJ59_12275 IPR003445 Cation transporter AYJ59_12295 IPR009097 Cyclic phosphodiesterase AYJ59_12295 IPR004175 RNA 2',3'-cyclic phosphodiesterase AYJ59_12300 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP AYJ59_12300 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AYJ59_12300 IPR004960 Bacterial lipid A biosynthesis acyltransferase AYJ59_12305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_12305 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AYJ59_12305 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AYJ59_12305 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase AYJ59_12310 IPR029787 Nucleotide cyclase AYJ59_12310 IPR000160 GGDEF domain AYJ59_12310 IPR019494 FIST, C-domain AYJ59_12310 IPR001633 EAL domain AYJ59_12310 IPR013702 FIST domain, N-terminal AYJ59_12310 IPR035919 EAL domain superfamily AYJ59_12315 IPR012745 Pseudoazurin AYJ59_12315 IPR008972 Cupredoxin AYJ59_12315 IPR000923 Blue (type 1) copper domain AYJ59_12315 IPR002386 Amicyanin/Pseudoazurin AYJ59_12315 IPR001235 Blue (type 1) copper protein, plastocyanin-type AYJ59_12330 IPR012910 TonB-dependent receptor, plug domain AYJ59_12330 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_12330 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_12330 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_12330 IPR010916 TonB box, conserved site AYJ59_12330 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_12330 IPR010917 TonB-dependent receptor, conserved site AYJ59_12335 IPR035906 MetI-like superfamily AYJ59_12335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AYJ59_12340 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AYJ59_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12340 IPR017871 ABC transporter, conserved site AYJ59_12340 IPR003439 ABC transporter-like AYJ59_12340 IPR003593 AAA+ ATPase domain AYJ59_12350 IPR003593 AAA+ ATPase domain AYJ59_12350 IPR003439 ABC transporter-like AYJ59_12350 IPR017871 ABC transporter, conserved site AYJ59_12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12350 IPR015863 ABC transporter, hemin import, HmuV AYJ59_12355 IPR000522 ABC transporter, permease protein, BtuC-like AYJ59_12355 IPR037294 ABC transporter, BtuC-like AYJ59_12360 IPR002491 ABC transporter periplasmic binding domain AYJ59_12365 IPR007845 Haemin-degrading HemS/ChuX domain AYJ59_12370 IPR010101 TonB-dependent vitamin B12 transporter BtuB AYJ59_12370 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_12370 IPR039426 Vitamin B12 transporter BtuB-like AYJ59_12370 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_12370 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_12370 IPR012910 TonB-dependent receptor, plug domain AYJ59_12380 IPR012347 Ferritin-like AYJ59_12380 IPR001519 Ferritin AYJ59_12380 IPR009078 Ferritin-like superfamily AYJ59_12380 IPR008331 Ferritin/DPS protein domain AYJ59_12380 IPR041719 Ferritin, prokaryotic-type AYJ59_12380 IPR009040 Ferritin-like diiron domain AYJ59_12400 IPR002781 Transmembrane protein TauE-like AYJ59_12405 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA AYJ59_12405 IPR030391 RNA methyltransferase TrmA, conserved site AYJ59_12405 IPR030390 RNA methyltransferase TrmA, active site AYJ59_12405 IPR010280 (Uracil-5)-methyltransferase family AYJ59_12405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12410 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12410 IPR011006 CheY-like superfamily AYJ59_12410 IPR000160 GGDEF domain AYJ59_12410 IPR029787 Nucleotide cyclase AYJ59_12415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AYJ59_12415 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AYJ59_12415 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AYJ59_12415 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AYJ59_12420 IPR011005 Dihydropteroate synthase-like AYJ59_12420 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AYJ59_12420 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AYJ59_12420 IPR006158 Cobalamin (vitamin B12)-binding domain AYJ59_12420 IPR000489 Pterin-binding domain AYJ59_12420 IPR036724 Cobalamin-binding domain superfamily AYJ59_12420 IPR011822 Cobalamin-dependent methionine synthase AYJ59_12420 IPR036594 Methionine synthase domain AYJ59_12420 IPR033706 Methionine synthase, B12-binding domain AYJ59_12420 IPR003726 Homocysteine-binding domain AYJ59_12420 IPR036589 Homocysteine-binding domain superfamily AYJ59_12420 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AYJ59_12440 IPR006667 SLC41 divalent cation transporters, integral membrane domain AYJ59_12440 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AYJ59_12440 IPR006668 Magnesium transporter, MgtE intracellular domain AYJ59_12440 IPR006669 Magnesium transporter MgtE AYJ59_12440 IPR000644 CBS domain AYJ59_12440 IPR038076 MgtE, N-terminal domain superfamily AYJ59_12440 IPR038048 Magnesium transporter MgtE, transmembrane domain AYJ59_12460 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AYJ59_12460 IPR016174 Di-haem cytochrome, transmembrane AYJ59_12465 IPR004597 DNA-3-methyladenine glycosylase I AYJ59_12465 IPR005019 Methyladenine glycosylase AYJ59_12465 IPR011257 DNA glycosylase AYJ59_12485 IPR029058 Alpha/Beta hydrolase fold AYJ59_12485 IPR000073 Alpha/beta hydrolase fold-1 AYJ59_12485 IPR005944 Proline iminopeptidase AYJ59_12485 IPR002410 Peptidase S33 AYJ59_12490 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AYJ59_12490 IPR003732 D-aminoacyl-tRNA deacylase DTD AYJ59_12495 IPR005330 MHYT domain AYJ59_12495 IPR000160 GGDEF domain AYJ59_12495 IPR035919 EAL domain superfamily AYJ59_12495 IPR001633 EAL domain AYJ59_12495 IPR029787 Nucleotide cyclase AYJ59_12515 IPR023045 Molybdenum cofactor biosynthesis C AYJ59_12515 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AYJ59_12515 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AYJ59_12520 IPR008284 Molybdenum cofactor biosynthesis, conserved site AYJ59_12520 IPR001453 MoaB/Mog domain AYJ59_12520 IPR036425 MoaB/Mog-like domain superfamily AYJ59_12520 IPR036135 MoeA, N-terminal and linker domain superfamily AYJ59_12520 IPR005110 MoeA, N-terminal and linker domain AYJ59_12520 IPR036688 MoeA, C-terminal, domain IV superfamily AYJ59_12520 IPR005111 MoeA, C-terminal, domain IV AYJ59_12520 IPR038987 Molybdopterin biosynthesis protein MoeA-like AYJ59_12525 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AYJ59_12525 IPR003448 Molybdopterin biosynthesis MoaE AYJ59_12530 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ59_12530 IPR012675 Beta-grasp domain superfamily AYJ59_12530 IPR003749 Sulfur carrier ThiS/MoaD-like AYJ59_12535 IPR007197 Radical SAM AYJ59_12535 IPR010505 Molybdenum cofactor synthesis C-terminal AYJ59_12535 IPR013483 Molybdenum cofactor biosynthesis protein A AYJ59_12535 IPR006638 Elp3/MiaB/NifB AYJ59_12535 IPR013785 Aldolase-type TIM barrel AYJ59_12555 IPR013785 Aldolase-type TIM barrel AYJ59_12555 IPR001731 Delta-aminolevulinic acid dehydratase AYJ59_12555 IPR030656 Delta-aminolevulinic acid dehydratase, active site AYJ59_12560 IPR041121 SDH, C-terminal AYJ59_12560 IPR036291 NAD(P)-binding domain superfamily AYJ59_12560 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AYJ59_12560 IPR022893 Shikimate dehydrogenase family AYJ59_12560 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AYJ59_12560 IPR011342 Shikimate dehydrogenase AYJ59_12565 IPR005330 MHYT domain AYJ59_12565 IPR000160 GGDEF domain AYJ59_12565 IPR035919 EAL domain superfamily AYJ59_12565 IPR001633 EAL domain AYJ59_12565 IPR029787 Nucleotide cyclase AYJ59_12570 IPR011004 Trimeric LpxA-like superfamily AYJ59_12570 IPR001451 Hexapeptide repeat AYJ59_12580 IPR037509 Phosphomethylpyrimidine synthase AYJ59_12580 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AYJ59_12580 IPR038521 ThiC/Bza superfamily AYJ59_12580 IPR025747 ThiC-associated domain AYJ59_12585 IPR012727 Glycine oxidase ThiO AYJ59_12585 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_12585 IPR006076 FAD dependent oxidoreductase AYJ59_12585 IPR023209 D-amino-acid oxidase AYJ59_12590 IPR013785 Aldolase-type TIM barrel AYJ59_12590 IPR012675 Beta-grasp domain superfamily AYJ59_12590 IPR008867 Thiazole synthase AYJ59_12590 IPR010035 ThiS, thiamine-biosynthesis AYJ59_12590 IPR003749 Sulfur carrier ThiS/MoaD-like AYJ59_12590 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AYJ59_12590 IPR033983 Thiazole synthase ThiG AYJ59_12595 IPR013785 Aldolase-type TIM barrel AYJ59_12595 IPR033983 Thiazole synthase ThiG AYJ59_12595 IPR008867 Thiazole synthase AYJ59_12600 IPR034291 Thiamine phosphate synthase AYJ59_12600 IPR022998 Thiamine phosphate synthase/TenI AYJ59_12600 IPR036206 Thiamin phosphate synthase superfamily AYJ59_12600 IPR013785 Aldolase-type TIM barrel AYJ59_12610 IPR003333 Mycolic acid cyclopropane synthase AYJ59_12610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12615 IPR020084 NUDIX hydrolase, conserved site AYJ59_12615 IPR006357 HAD-superfamily hydrolase, subfamily IIA AYJ59_12615 IPR036412 HAD-like superfamily AYJ59_12615 IPR000086 NUDIX hydrolase domain AYJ59_12615 IPR015797 NUDIX hydrolase-like domain superfamily AYJ59_12615 IPR020476 NUDIX hydrolase AYJ59_12615 IPR023214 HAD superfamily AYJ59_12635 IPR030148 Catecholate siderophore receptor Fiu AYJ59_12635 IPR012910 TonB-dependent receptor, plug domain AYJ59_12635 IPR000531 TonB-dependent receptor-like, beta-barrel AYJ59_12635 IPR039423 TonB-dependent receptor-like AYJ59_12635 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AYJ59_12635 IPR037066 TonB-dependent receptor, plug domain superfamily AYJ59_12635 IPR010105 TonB-dependent siderophore receptor AYJ59_12650 IPR027469 Cation efflux transmembrane domain superfamily AYJ59_12650 IPR002524 Cation efflux protein AYJ59_12650 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AYJ59_12655 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AYJ59_12655 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_12655 IPR023753 FAD/NAD(P)-binding domain AYJ59_12655 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AYJ59_12655 IPR006322 Glutathione reductase, eukaryote/bacterial AYJ59_12655 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AYJ59_12655 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYJ59_12660 IPR011906 Glutaredoxin domain AYJ59_12660 IPR013740 Redoxin AYJ59_12660 IPR037944 Peroxiredoxin-5-like AYJ59_12660 IPR014025 Glutaredoxin subgroup AYJ59_12660 IPR002109 Glutaredoxin AYJ59_12660 IPR011767 Glutaredoxin active site AYJ59_12660 IPR036249 Thioredoxin-like superfamily AYJ59_12665 IPR036737 OmpA-like domain superfamily AYJ59_12665 IPR006664 Outer membrane protein, bacterial AYJ59_12665 IPR006665 OmpA-like domain AYJ59_12665 IPR006690 Outer membrane protein, OmpA-like, conserved site AYJ59_12675 IPR023166 HI0933-like insert domain superfamily AYJ59_12675 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like AYJ59_12675 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_12685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AYJ59_12685 IPR001789 Signal transduction response regulator, receiver domain AYJ59_12685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AYJ59_12685 IPR003594 Histidine kinase/HSP90-like ATPase AYJ59_12685 IPR003660 HAMP domain AYJ59_12685 IPR005467 Histidine kinase domain AYJ59_12685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AYJ59_12685 IPR036641 HPT domain superfamily AYJ59_12685 IPR011006 CheY-like superfamily AYJ59_12685 IPR019247 Histidine kinase BarA, N-terminal AYJ59_12685 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AYJ59_12685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AYJ59_12705 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AYJ59_12705 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AYJ59_12705 IPR006076 FAD dependent oxidoreductase AYJ59_12705 IPR036188 FAD/NAD(P)-binding domain superfamily AYJ59_12705 IPR008471 MnmC-like methyltransferase AYJ59_12715 IPR003439 ABC transporter-like AYJ59_12715 IPR015854 ABC transporter, lipoprotein release, LolD AYJ59_12715 IPR011924 Lipoprotein releasing system, ATP-binding protein AYJ59_12715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12715 IPR003593 AAA+ ATPase domain AYJ59_12715 IPR017871 ABC transporter, conserved site AYJ59_12720 IPR005753 DNA helicase, ATP-dependent, UvrD type AYJ59_12720 IPR034739 UvrD/AddA helicase, N-terminal AYJ59_12720 IPR014016 UvrD-like helicase, ATP-binding domain AYJ59_12720 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12720 IPR000212 DNA helicase, UvrD/REP type AYJ59_12720 IPR014017 UvrD-like DNA helicase, C-terminal AYJ59_12720 IPR013986 DExx box DNA helicase domain superfamily AYJ59_12725 IPR013766 Thioredoxin domain AYJ59_12725 IPR036249 Thioredoxin-like superfamily AYJ59_12725 IPR005746 Thioredoxin AYJ59_12725 IPR017937 Thioredoxin, conserved site AYJ59_12730 IPR036269 Rho termination factor, N-terminal domain superfamily AYJ59_12730 IPR004665 Transcription termination factor Rho AYJ59_12730 IPR041703 Transcription termination factor Rho, ATP binding domain AYJ59_12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12730 IPR012340 Nucleic acid-binding, OB-fold AYJ59_12730 IPR011129 Cold shock domain AYJ59_12730 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AYJ59_12730 IPR003593 AAA+ ATPase domain AYJ59_12730 IPR011112 Rho termination factor, N-terminal AYJ59_12730 IPR011113 Rho termination factor, RNA-binding domain AYJ59_12740 IPR042105 Ribosomal protein L31 superfamily AYJ59_12740 IPR027493 Ribosomal protein L31 type B AYJ59_12740 IPR002150 Ribosomal protein L31 AYJ59_12740 IPR034704 L28p-like AYJ59_12750 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AYJ59_12750 IPR006361 Uroporphyrinogen decarboxylase HemE AYJ59_12750 IPR038071 UROD/MetE-like superfamily AYJ59_12760 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AYJ59_12760 IPR035919 EAL domain superfamily AYJ59_12760 IPR013976 Metal-dependent hydrolase HDOD AYJ59_12760 IPR001633 EAL domain AYJ59_12765 IPR007457 Fe(II) trafficking protein YggX AYJ59_12765 IPR036766 Fe(II) trafficking protein YggX superfamily AYJ59_12770 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AYJ59_12770 IPR003265 HhH-GPD domain AYJ59_12770 IPR004035 Endonuclease III, iron-sulphur binding site AYJ59_12770 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AYJ59_12770 IPR004036 Endonuclease III-like, conserved site-2 AYJ59_12770 IPR029119 MutY, C-terminal AYJ59_12770 IPR015797 NUDIX hydrolase-like domain superfamily AYJ59_12770 IPR011257 DNA glycosylase AYJ59_12770 IPR000445 Helix-hairpin-helix motif AYJ59_12770 IPR005760 A/G-specific adenine glycosylase MutY AYJ59_12775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AYJ59_12775 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AYJ59_12785 IPR034505 Anaerobic coproporphyrinogen-III oxidase AYJ59_12785 IPR006638 Elp3/MiaB/NifB AYJ59_12785 IPR007197 Radical SAM AYJ59_12785 IPR004559 Heme chaperone HemW-like AYJ59_12785 IPR023404 Radical SAM, alpha/beta horseshoe AYJ59_12785 IPR010723 HemN, C-terminal AYJ59_12790 IPR002505 Phosphate acetyl/butaryl transferase AYJ59_12790 IPR042112 Phosphate acetyltransferase, domain 2 AYJ59_12790 IPR042113 Phosphate acetyltransferase, domain 1 AYJ59_12790 IPR004614 Phosphate acetyltransferase AYJ59_12790 IPR027417 P-loop containing nucleoside triphosphate hydrolase AYJ59_12790 IPR016475 Phosphate acetyltransferase, bacteria AYJ59_12790 IPR010766 DRTGG AYJ59_12790 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AYJ59_12795 IPR023865 Aliphatic acid kinase, short-chain, conserved site AYJ59_12795 IPR004372 Acetate/propionate kinase AYJ59_12795 IPR000890 Aliphatic acid kinase, short-chain AYJ59_12800 IPR011223 Uncharacterised conserved protein UCP028770 AYJ59_12805 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AYJ59_12840 IPR022418 Porphobilinogen deaminase, C-terminal AYJ59_12840 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AYJ59_12840 IPR000860 Porphobilinogen deaminase AYJ59_12840 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AYJ59_12840 IPR022417 Porphobilinogen deaminase, N-terminal AYJ59_12850 IPR008948 L-Aspartase-like AYJ59_12850 IPR022761 Fumarate lyase, N-terminal AYJ59_12850 IPR000362 Fumarate lyase family AYJ59_12850 IPR020557 Fumarate lyase, conserved site AYJ59_12850 IPR024083 Fumarase/histidase, N-terminal AYJ59_12850 IPR009049 Argininosuccinate lyase AYJ59_12850 IPR029419 Argininosuccinate lyase, C-terminal AYJ59_12855 IPR029057 Phosphoribosyltransferase-like AYJ59_12855 IPR000836 Phosphoribosyltransferase domain AYJ59_12855 IPR005764 Adenine phosphoribosyl transferase